APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 427 33.658 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 421 3.5E-116 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 PANTHER PTHR21090 5 424 3.7E-177 T 25-04-2016 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 PANTHER PTHR21090:SF5 5 424 3.7E-177 T 25-04-2016 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 25-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 Gene3D G3DSA:3.65.10.10 20 228 2.7E-57 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 25-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 SUPERFAMILY SSF55205 4 424 5.56E-135 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 PIRSF PIRSF000505 1 427 6.6E-112 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 425 7.5E-133 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04180 146cbfaca28993df68b25ada97b145c8 427 Gene3D G3DSA:3.65.10.10 229 424 1.6E-54 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 PANTHER PTHR10169:SF48 7 779 0.0 T 25-04-2016 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 615 659 1.7E-9 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 560 606 9.4E-12 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 759 2.9E-11 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 705 3.5E-11 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 552 1.4E-9 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 809 2.1E-12 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 812 29.173 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 PANTHER PTHR10169 7 779 0.0 T 25-04-2016 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 11 810 0.0 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Gene3D G3DSA:3.30.1360.40 239 335 5.9E-35 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 474 5.4E-156 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Gene3D G3DSA:3.90.199.10 34 238 1.6E-120 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Gene3D G3DSA:3.90.199.10 336 401 1.6E-120 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 SUPERFAMILY SSF56719 34 489 3.53E-176 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 Gene3D G3DSA:2.120.10.90 499 809 7.7E-123 T 25-04-2016 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 SMART SM00434 14 467 9.0E-284 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02740 b5aff3308021af6894a39f78cb440186 825 SUPERFAMILY SSF101904 502 814 4.05E-105 T 25-04-2016 APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 225 2.0E-61 T 25-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 PANTHER PTHR12725 2 227 4.9E-35 T 25-04-2016 APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 Gene3D G3DSA:3.40.50.1000 92 227 7.4E-41 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 194 1.3E-9 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 8.2E-23 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 Gene3D G3DSA:1.10.150.240 16 91 8.1E-28 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 PANTHER PTHR12725:SF57 2 227 4.9E-35 T 25-04-2016 APQ13_RS02145 b41438151d97aa3e2d2e1a647ff58042 231 SUPERFAMILY SSF56784 2 227 1.15E-43 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS06465 c0c3ebcabbd0241e1277e576b1c4c3c5 99 Gene3D G3DSA:3.40.50.270 2 91 1.2E-9 T 25-04-2016 APQ13_RS06465 c0c3ebcabbd0241e1277e576b1c4c3c5 99 SUPERFAMILY SSF52794 1 92 1.83E-15 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS06465 c0c3ebcabbd0241e1277e576b1c4c3c5 99 PANTHER PTHR33843:SF2 1 92 3.5E-19 T 25-04-2016 APQ13_RS06465 c0c3ebcabbd0241e1277e576b1c4c3c5 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 9.1E-11 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS06465 c0c3ebcabbd0241e1277e576b1c4c3c5 99 PANTHER PTHR33843 1 92 3.5E-19 T 25-04-2016 APQ13_RS03085 9832c5af68cb0bd23a4bba64ecfbc7f0 277 PANTHER PTHR13778 5 255 1.1E-13 T 25-04-2016 APQ13_RS03085 9832c5af68cb0bd23a4bba64ecfbc7f0 277 SUPERFAMILY SSF53448 6 271 2.81E-57 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS03085 9832c5af68cb0bd23a4bba64ecfbc7f0 277 PANTHER PTHR13778:SF1 5 255 1.1E-13 T 25-04-2016 APQ13_RS03085 9832c5af68cb0bd23a4bba64ecfbc7f0 277 Pfam PF01501 Glycosyl transferase family 8 8 255 6.1E-35 T 25-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 APQ13_RS03085 9832c5af68cb0bd23a4bba64ecfbc7f0 277 Gene3D G3DSA:3.90.550.10 6 271 3.5E-57 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 PANTHER PTHR23151:SF55 1 162 1.0E-25 T 25-04-2016 APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 5.4E-12 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 5.4E-12 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 5.4E-12 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 Pfam PF00364 Biotin-requiring enzyme 89 161 1.4E-18 T 25-04-2016 IPR000089 Biotin/lipoyl attachment APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 Gene3D G3DSA:2.40.50.100 86 162 2.0E-25 T 25-04-2016 APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 25-04-2016 IPR001882 Biotin-binding site APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 SUPERFAMILY SSF51230 88 161 5.5E-21 T 25-04-2016 IPR011053 Single hybrid motif APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 PANTHER PTHR23151 1 162 1.0E-25 T 25-04-2016 APQ13_RS09660 5d7e970b1ff569e183400abb94f9ada8 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 162 6.0E-38 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APQ13_RS06655 cf34a154439e739e0aa7ba55ef4cf7b5 386 PANTHER PTHR22926:SF3 1 374 2.6E-87 T 25-04-2016 APQ13_RS06655 cf34a154439e739e0aa7ba55ef4cf7b5 386 ProSitePatterns PS01348 MraY family signature 2. 164 175 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS06655 cf34a154439e739e0aa7ba55ef4cf7b5 386 PANTHER PTHR22926 1 374 2.6E-87 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS06655 cf34a154439e739e0aa7ba55ef4cf7b5 386 Pfam PF00953 Glycosyl transferase family 4 89 246 5.0E-38 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 PANTHER PTHR11601 2 370 2.6E-137 T 25-04-2016 APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 PANTHER PTHR11601:SF20 2 370 2.6E-137 T 25-04-2016 APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 Gene3D G3DSA:3.40.640.10 15 244 1.7E-81 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 Pfam PF00266 Aminotransferase class-V 2 362 2.7E-78 T 25-04-2016 IPR000192 Aminotransferase class V domain APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 PIRSF PIRSF005572 1 372 6.5E-108 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 Gene3D G3DSA:3.90.1150.10 245 369 8.3E-27 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS03030 a28fd6b7d9b90ae6ad4852bd8a815fc0 372 SUPERFAMILY SSF53383 1 370 9.21E-98 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 258 29.21 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 PANTHER PTHR10314:SF4 77 130 5.5E-19 T 25-04-2016 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 PANTHER PTHR10314:SF4 11 54 5.5E-19 T 25-04-2016 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 Gene3D G3DSA:3.20.20.70 5 247 1.2E-78 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 PANTHER PTHR10314 77 130 5.5E-19 T 25-04-2016 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 PANTHER PTHR10314 11 54 5.5E-19 T 25-04-2016 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 SUPERFAMILY SSF51366 5 252 4.47E-70 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 Pfam PF00290 Tryptophan synthase alpha chain 10 248 2.8E-80 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 247 8.1E-60 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05270 4743fe646dc5630d57060b6cfed261f6 260 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 51 64 - T 25-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PIRSF PIRSF019574 1 356 3.7E-126 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 Pfam PF13416 Bacterial extracellular solute-binding protein 51 320 2.6E-39 T 25-04-2016 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 100 113 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 98 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 131 147 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 57 78 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 211 230 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 57 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 9.2E-58 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 SUPERFAMILY SSF53850 36 353 1.36E-91 T 25-04-2016 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 Gene3D G3DSA:3.40.190.10 142 277 2.0E-16 T 25-04-2016 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PANTHER PTHR30222 12 356 1.5E-112 T 25-04-2016 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 PANTHER PTHR30222:SF5 12 356 1.5E-112 T 25-04-2016 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 Gene3D G3DSA:3.40.190.10 35 140 2.7E-66 T 25-04-2016 APQ13_RS03335 46a8c99694ae8a6b15488ac78be34e88 357 Gene3D G3DSA:3.40.190.10 278 321 2.7E-66 T 25-04-2016 APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 150 1.1E-58 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 Gene3D G3DSA:2.40.280.10 8 127 1.2E-52 T 25-04-2016 IPR023620 Small protein B APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 1.0E-67 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 PANTHER PTHR30308 1 155 6.9E-83 T 25-04-2016 APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 SUPERFAMILY SSF74982 4 132 2.22E-51 T 25-04-2016 IPR023620 Small protein B APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 25-04-2016 IPR020081 SsrA-binding protein, conserved site APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 PANTHER PTHR30308:SF2 1 155 6.9E-83 T 25-04-2016 APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 73.255 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 APQ13_RS00570 1f0a7aa617c57e559b2e72fbc21f059c 155 Pfam PF01668 SmpB protein 8 72 3.5E-32 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 APQ13_RS04995 dbc453a6b6b5e5a1a5636c16390719a7 186 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 13 175 7.4E-30 T 25-04-2016 IPR030949 ECF transporter S component, folate family APQ13_RS04995 dbc453a6b6b5e5a1a5636c16390719a7 186 Pfam PF07155 ECF-type riboflavin transporter, S component 10 174 6.6E-13 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 25-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 Gene3D G3DSA:1.10.287.990 20 89 1.7E-28 T 25-04-2016 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 89 8.2E-30 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 SUPERFAMILY SSF54719 91 201 1.83E-45 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 5.0E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.0E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 5.0E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.0E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.0E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PANTHER PTHR11404 5 201 1.0E-98 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 SUPERFAMILY SSF46609 1 90 2.88E-33 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 PIRSF PIRSF000349 1 203 5.6E-80 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS04885 41e3fe97d80454a13e8f7e223e6a5604 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 194 2.7E-41 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 PANTHER PTHR24567 4 210 7.4E-44 T 25-04-2016 APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 Pfam PF00027 Cyclic nucleotide-binding domain 29 114 2.5E-14 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 SUPERFAMILY SSF46785 145 211 4.02E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 PANTHER PTHR24567:SF26 4 210 7.4E-44 T 25-04-2016 APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 Gene3D G3DSA:2.60.120.10 20 134 2.9E-21 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 Gene3D G3DSA:1.10.10.10 163 212 8.3E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 SUPERFAMILY SSF51206 17 132 3.93E-21 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like APQ13_RS07015 6a9b36cd3989461836ab3165b9f32d36 215 SMART SM00100 8 127 2.5E-6 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Gene3D G3DSA:2.60.260.20 209 256 9.1E-23 T 25-04-2016 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Gene3D G3DSA:2.60.260.20 110 135 9.1E-23 T 25-04-2016 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Gene3D G3DSA:2.60.260.20 260 337 7.1E-21 T 25-04-2016 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 PANTHER PTHR24078 1 353 8.0E-168 T 25-04-2016 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Gene3D G3DSA:1.10.287.110 1 106 1.4E-35 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Pfam PF00684 DnaJ central domain 146 210 5.2E-15 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Gene3D G3DSA:2.10.230.10 136 208 5.5E-22 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 PRINTS PR00625 DnaJ domain signature 7 25 1.1E-29 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 PRINTS PR00625 DnaJ domain signature 25 40 1.1E-29 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 PRINTS PR00625 DnaJ domain signature 41 61 1.1E-29 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 PRINTS PR00625 DnaJ domain signature 61 80 1.1E-29 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 SUPERFAMILY SSF49493 217 257 1.03E-18 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 SUPERFAMILY SSF49493 113 154 1.03E-18 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 39.826 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Pfam PF01556 DnaJ C terminal domain 119 336 6.9E-41 T 25-04-2016 IPR002939 Chaperone DnaJ, C-terminal APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 SMART SM00271 4 61 1.8E-28 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 Pfam PF00226 DnaJ domain 5 66 6.7E-25 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 SUPERFAMILY SSF49493 262 347 1.31E-22 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 PANTHER PTHR24078:SF190 1 353 8.0E-168 T 25-04-2016 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 SUPERFAMILY SSF46565 1 103 9.94E-34 T 25-04-2016 IPR001623 DnaJ domain APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 353 9.9E-142 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 SUPERFAMILY SSF57938 133 213 3.01E-20 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APQ13_RS07230 2ab2f4b599d6f2c13524d0bdd9028650 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 25-04-2016 IPR018253 DnaJ domain, conserved site APQ13_RS07475 909e8736ac17a60192fd5fc3a44f3225 431 Pfam PF05257 CHAP domain 329 406 4.3E-13 T 25-04-2016 IPR007921 CHAP domain APQ13_RS07475 909e8736ac17a60192fd5fc3a44f3225 431 SUPERFAMILY SSF54001 322 426 2.75E-23 T 25-04-2016 APQ13_RS07475 909e8736ac17a60192fd5fc3a44f3225 431 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 399 422 6.9E-58 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS07475 909e8736ac17a60192fd5fc3a44f3225 431 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 357 381 6.9E-58 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS07475 909e8736ac17a60192fd5fc3a44f3225 431 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 332 354 6.9E-58 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS07475 909e8736ac17a60192fd5fc3a44f3225 431 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 214 241 6.9E-58 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 Gene3D G3DSA:3.40.1390.10 29 108 2.6E-9 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 PANTHER PTHR23135 24 483 1.4E-121 T 25-04-2016 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 SUPERFAMILY SSF53244 330 478 8.11E-31 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 SUPERFAMILY SSF53623 81 342 1.57E-46 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 PANTHER PTHR23135:SF4 24 483 1.4E-121 T 25-04-2016 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 37 482 7.0E-91 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 Pfam PF08245 Mur ligase middle domain 119 310 2.0E-32 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 SUPERFAMILY SSF63418 26 109 1.44E-14 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 Gene3D G3DSA:3.90.190.20 334 472 1.1E-33 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 483 27.433 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 Gene3D G3DSA:3.40.1190.10 109 333 2.0E-51 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS00235 e67b3a5f732cdc6025359f567a36f7c6 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 414 3.0E-16 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS01590 a11fb45e411eccc378e337a8e3fab94f 172 Gene3D G3DSA:3.30.420.10 3 162 1.4E-22 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS01590 a11fb45e411eccc378e337a8e3fab94f 172 SUPERFAMILY SSF53098 2 171 1.13E-27 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS01590 a11fb45e411eccc378e337a8e3fab94f 172 PANTHER PTHR32552 1 163 3.4E-24 T 25-04-2016 APQ13_RS01590 a11fb45e411eccc378e337a8e3fab94f 172 Pfam PF00665 Integrase core domain 9 124 5.1E-17 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 SUPERFAMILY SSF55874 14 223 2.1E-73 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 431 445 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 122 136 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 497 513 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 79 92 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 583 599 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 515 532 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 535 547 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR00418 DNA topoisomerase II family signature 44 59 1.6E-67 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Pfam PF01751 Toprim domain 430 541 1.3E-17 T 25-04-2016 IPR006171 Toprim domain APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Gene3D G3DSA:3.30.230.10 231 403 1.1E-74 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 SUPERFAMILY SSF56719 405 642 7.32E-84 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Gene3D G3DSA:3.40.50.670 415 633 6.3E-89 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PANTHER PTHR10169 13 643 1.4E-301 T 25-04-2016 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 183 2.0E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Pfam PF00204 DNA gyrase B 232 401 1.4E-65 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 SMART SM00387 40 184 2.4E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Gene3D G3DSA:3.30.565.10 15 225 5.2E-92 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 650 88.799 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 15 25 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 385 405 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 323 339 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 371 385 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 231 253 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 620 636 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 481 490 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 190 205 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 604 616 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 PRINTS PR01159 DNA gyrase subunit B signature 205 218 4.1E-77 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 SMART SM00433 44 644 0.0 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 579 640 1.7E-28 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 648 2.3E-296 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS01955 1155dec36ff3829aaf054a8be2e4ff07 650 SUPERFAMILY SSF54211 232 402 5.5E-62 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Pfam PF07499 RuvA, C-terminal domain 153 196 6.5E-11 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 2 196 1.8E-48 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 SUPERFAMILY SSF50249 1 62 3.54E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 PANTHER PTHR33796 2 197 4.6E-67 T 25-04-2016 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Gene3D G3DSA:1.10.150.20 66 139 7.9E-26 T 25-04-2016 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 SUPERFAMILY SSF46929 150 196 9.94E-10 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Pfam PF01330 RuvA N terminal domain 1 61 5.0E-20 T 25-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Pfam PF14520 Helix-hairpin-helix domain 71 127 8.6E-11 T 25-04-2016 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Gene3D G3DSA:1.10.8.10 150 196 8.3E-13 T 25-04-2016 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 SMART SM00278 107 126 25.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 SMART SM00278 72 91 4.1 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 SUPERFAMILY SSF47781 65 134 1.28E-18 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Gene3D G3DSA:2.40.50.140 1 65 5.5E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08015 3b091879cea4ef3cb1c0271ca7824f2c 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 29.176 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 SUPERFAMILY SSF75445 127 203 1.31E-19 T 25-04-2016 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 217 1.1E-56 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 218 3.1E-81 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 Gene3D G3DSA:3.30.70.260 142 201 9.9E-22 T 25-04-2016 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 SUPERFAMILY SSF100950 2 147 5.33E-44 T 25-04-2016 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 Gene3D G3DSA:3.40.50.1360 2 141 1.4E-59 T 25-04-2016 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 PANTHER PTHR11934 1 223 1.6E-88 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APQ13_RS02200 f8f984c64246554131311083108d6ec4 225 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 221 33.484 T 25-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 186 5.6E-101 T 25-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 SUPERFAMILY SSF52833 1 186 4.88E-52 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 Gene3D G3DSA:3.40.30.10 3 183 5.0E-57 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 PIRSF PIRSF000239 1 186 1.5E-49 T 25-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 PANTHER PTHR10681 1 186 1.5E-84 T 25-04-2016 APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 PANTHER PTHR10681:SF121 1 186 1.5E-84 T 25-04-2016 APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 155 181 2.5E-5 T 25-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APQ13_RS04295 edae4c488f3d567f468e0dc2d1195949 186 Pfam PF00578 AhpC/TSA family 4 132 1.1E-31 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PANTHER PTHR13479 10 79 1.1E-32 T 25-04-2016 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Pfam PF01084 Ribosomal protein S18 22 73 7.6E-29 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 SUPERFAMILY SSF46911 6 78 2.75E-30 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 78 22.528 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 8.7E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 8.7E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 8.7E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 8.7E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 25-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 4.0E-25 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 77 1.7E-31 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09125 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Gene3D G3DSA:4.10.640.10 13 78 8.0E-34 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS05690 097789556cb3ddd61683213600615002 339 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 47 59 5.3E-5 T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05690 097789556cb3ddd61683213600615002 339 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 16 335 4.6E-74 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05690 097789556cb3ddd61683213600615002 339 Pfam PF00953 Glycosyl transferase family 4 85 249 5.7E-38 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05690 097789556cb3ddd61683213600615002 339 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 4 338 21.367 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05690 097789556cb3ddd61683213600615002 339 PANTHER PTHR22926 5 339 3.5E-118 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05690 097789556cb3ddd61683213600615002 339 PANTHER PTHR22926:SF5 5 339 3.5E-118 T 25-04-2016 APQ13_RS05690 097789556cb3ddd61683213600615002 339 ProSitePatterns PS01348 MraY family signature 2. 169 180 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS09700 0164e011348e5f312335ad824524419f 163 Pfam PF13673 Acetyltransferase (GNAT) domain 21 158 7.8E-11 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS09700 0164e011348e5f312335ad824524419f 163 Gene3D G3DSA:3.40.630.30 2 159 6.1E-40 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS09700 0164e011348e5f312335ad824524419f 163 SUPERFAMILY SSF55729 1 157 1.37E-22 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS09700 0164e011348e5f312335ad824524419f 163 PANTHER PTHR10908 1 159 1.3E-32 T 25-04-2016 APQ13_RS01895 79a0ec7cbf71f695935b2031dd96e317 90 Gene3D G3DSA:1.20.59.10 1 84 1.4E-23 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS01895 79a0ec7cbf71f695935b2031dd96e317 90 SUPERFAMILY SSF48600 2 86 3.97E-20 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS01895 79a0ec7cbf71f695935b2031dd96e317 90 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 3 83 2.6E-27 T 25-04-2016 IPR011279 Chorismate mutase, Gram-positive APQ13_RS01895 79a0ec7cbf71f695935b2031dd96e317 90 Pfam PF01817 Chorismate mutase type II 7 83 1.8E-20 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS01895 79a0ec7cbf71f695935b2031dd96e317 90 SMART SM00830 7 86 1.1E-21 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS01895 79a0ec7cbf71f695935b2031dd96e317 90 PANTHER PTHR38041 1 90 1.7E-14 T 25-04-2016 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 SMART SM01400 6 122 8.4E-78 T 25-04-2016 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 SUPERFAMILY SSF53271 71 308 7.61E-61 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 317 2.8E-119 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 PANTHER PTHR10210:SF41 1 322 1.8E-185 T 25-04-2016 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 2.1E-23 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 PANTHER PTHR10210 1 322 1.8E-185 T 25-04-2016 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 Gene3D G3DSA:3.40.50.2020 3 161 2.4E-74 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 2.9E-50 T 25-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 317 49.757 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 25-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APQ13_RS07470 10ca941bf17e7db94696de7cad528ae8 322 Gene3D G3DSA:3.40.50.2020 162 289 4.2E-49 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 PANTHER PTHR11098:SF1 9 478 1.9E-199 T 25-04-2016 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 Gene3D G3DSA:3.20.140.10 3 383 9.2E-131 T 25-04-2016 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 PIRSF PIRSF000484 2 478 3.0E-147 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 8 463 6.1E-186 T 25-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 SUPERFAMILY SSF51690 137 476 4.71E-126 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 PANTHER PTHR11098 9 478 1.9E-199 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 154 333 4.4E-8 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APQ13_RS05650 50e3c72276d084fafdf3fa5ba5923cac 486 SUPERFAMILY SSF54675 2 136 4.36E-47 T 25-04-2016 APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 PANTHER PTHR24220 8 325 1.2E-159 T 25-04-2016 APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 SUPERFAMILY SSF52540 6 254 2.11E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 SMART SM00382 35 233 4.9E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 PANTHER PTHR24220:SF535 8 325 1.2E-159 T 25-04-2016 APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 Gene3D G3DSA:3.40.50.300 5 257 9.2E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 4.1E-19 T 25-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 Pfam PF00005 ABC transporter 27 183 7.2E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06600 b5b488b29028f81cc1fc0c3aa65dfb80 350 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 297 5.9E-14 T 25-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APQ13_RS09270 3b80ca70051aff9be96cd8edb504d7f8 404 Gene3D G3DSA:3.40.640.10 51 279 3.1E-65 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS09270 3b80ca70051aff9be96cd8edb504d7f8 404 Pfam PF00155 Aminotransferase class I and II 34 383 2.5E-46 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS09270 3b80ca70051aff9be96cd8edb504d7f8 404 PANTHER PTHR11751 9 399 3.2E-160 T 25-04-2016 APQ13_RS09270 3b80ca70051aff9be96cd8edb504d7f8 404 Gene3D G3DSA:3.90.1150.10 280 404 7.2E-36 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS09270 3b80ca70051aff9be96cd8edb504d7f8 404 SUPERFAMILY SSF53383 5 402 4.84E-90 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS09270 3b80ca70051aff9be96cd8edb504d7f8 404 PANTHER PTHR11751:SF303 9 399 3.2E-160 T 25-04-2016 APQ13_RS00075 5c78f8fa13a843d79203fd9333f9bfb5 235 Hamap MF_01805 Segregation and condensation protein A [scpA]. 1 234 24.472 T 25-04-2016 IPR003768 Segregation and condensation protein A APQ13_RS00075 5c78f8fa13a843d79203fd9333f9bfb5 235 PANTHER PTHR33969 1 233 5.5E-60 T 25-04-2016 APQ13_RS00075 5c78f8fa13a843d79203fd9333f9bfb5 235 Pfam PF02616 Segregation and condensation protein ScpA 18 228 5.1E-26 T 25-04-2016 IPR003768 Segregation and condensation protein A APQ13_RS00075 5c78f8fa13a843d79203fd9333f9bfb5 235 PANTHER PTHR33969:SF2 1 233 5.5E-60 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 5.6E-43 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SUPERFAMILY SSF54980 601 688 2.73E-29 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.3E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.3E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PANTHER PTHR23115 1 177 0.0 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PANTHER PTHR23115 301 689 0.0 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PANTHER PTHR23115 253 281 0.0 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.7E-14 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PANTHER PTHR23115:SF66 1 177 0.0 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PANTHER PTHR23115:SF66 301 689 0.0 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 PANTHER PTHR23115:SF66 253 281 0.0 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SMART SM00838 598 685 1.6E-51 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 110.109 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 4.5E-71 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 689 0.0 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SUPERFAMILY SSF52540 6 280 5.48E-112 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Gene3D G3DSA:3.30.230.10 482 596 1.8E-49 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Pfam PF00679 Elongation factor G C-terminus 598 684 8.5E-30 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Pfam PF14492 Elongation Factor G, domain II 402 475 6.2E-34 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SUPERFAMILY SSF54980 400 478 5.4E-25 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Gene3D G3DSA:3.40.50.300 7 285 4.7E-110 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SUPERFAMILY SSF50447 263 400 1.84E-34 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Pfam PF03764 Elongation factor G, domain IV 477 596 3.5E-46 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SMART SM00889 478 596 3.3E-71 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 SUPERFAMILY SSF54211 477 597 1.09E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Gene3D G3DSA:2.40.30.10 303 403 4.7E-37 T 25-04-2016 APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Gene3D G3DSA:3.30.70.240 597 683 2.8E-33 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS06110 01c7297a58be897f9ab0f112fa1fdda8 693 Gene3D G3DSA:3.30.70.870 404 478 7.1E-38 T 25-04-2016 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Gene3D G3DSA:2.60.120.560 748 916 6.9E-29 T 25-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 SMART SM00635 924 1003 7.1E-17 T 25-04-2016 IPR003343 Bacterial Ig-like, group 2 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 SUPERFAMILY SSF49373 934 1005 1.65E-6 T 25-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 SUPERFAMILY SSF75005 438 754 6.28E-72 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 448 461 - T 25-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Gene3D G3DSA:2.120.10.10 493 694 4.9E-28 T 25-04-2016 IPR011040 Sialidases APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 PANTHER PTHR30175:SF0 431 917 7.7E-77 T 25-04-2016 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 SUPERFAMILY SSF49899 753 915 8.55E-27 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 802 872 1.2E-12 T 25-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 PANTHER PTHR30175 431 917 7.7E-77 T 25-04-2016 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 7 29 3.0E-6 T 25-04-2016 IPR022263 KxYKxGKxW signal peptide APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 SMART SM00640 448 876 8.9E-99 T 25-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Gene3D G3DSA:2.60.120.200 1104 1142 1.1E-5 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Pfam PF12733 Cadherin-like beta sandwich domain 360 432 8.2E-8 T 25-04-2016 IPR025883 Cadherin-like beta sandwich domain APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Gene3D G3DSA:2.60.40.1080 931 1007 6.8E-11 T 25-04-2016 APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 448 740 2.2E-50 T 25-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 SUPERFAMILY SSF49899 1072 1164 8.19E-8 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APQ13_RS07255 d923e51b039f0906f4d68c609442009a 1423 Pfam PF02368 Bacterial Ig-like domain (group 2) 924 1002 1.3E-20 T 25-04-2016 IPR003343 Bacterial Ig-like, group 2 APQ13_RS06920 1c5df297b89183f6f48ca514457a4d7c 130 SUPERFAMILY SSF54211 6 130 1.44E-48 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06920 1c5df297b89183f6f48ca514457a4d7c 130 PANTHER PTHR21569 1 130 4.0E-70 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APQ13_RS06920 1c5df297b89183f6f48ca514457a4d7c 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.543 T 25-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APQ13_RS06920 1c5df297b89183f6f48ca514457a4d7c 130 Gene3D G3DSA:3.30.230.10 5 130 1.6E-51 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS06920 1c5df297b89183f6f48ca514457a4d7c 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.4E-49 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APQ13_RS06920 1c5df297b89183f6f48ca514457a4d7c 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 25-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 Pfam PF00072 Response regulator receiver domain 4 123 8.8E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 PANTHER PTHR26402:SF577 2 216 9.2E-44 T 25-04-2016 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 Gene3D G3DSA:3.40.50.2300 1 137 2.6E-15 T 25-04-2016 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 SMART SM00850 150 244 2.4E-20 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 Pfam PF04397 LytTr DNA-binding domain 153 243 1.4E-22 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 Gene3D G3DSA:2.40.50.40 142 208 1.0E-15 T 25-04-2016 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 SMART SM00448 2 123 1.4E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 PANTHER PTHR26402 2 216 9.2E-44 T 25-04-2016 APQ13_RS08940 3cbf6ba875a53c4647874f6fdfe03ed6 250 SUPERFAMILY SSF52172 1 129 5.83E-12 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.3E-38 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.3E-38 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PRINTS PR00069 Aldo-keto reductase signature 154 183 1.3E-38 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PRINTS PR00069 Aldo-keto reductase signature 120 137 1.3E-38 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.3E-38 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PANTHER PTHR11732 1 279 2.8E-135 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 Gene3D G3DSA:3.20.20.100 2 266 6.1E-95 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 PANTHER PTHR11732:SF236 1 279 2.8E-135 T 25-04-2016 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 226 241 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 Pfam PF00248 Aldo/keto reductase family 23 257 2.8E-47 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 SUPERFAMILY SSF51430 3 264 6.55E-88 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS04645 43b49794ad0ea9c0330babe75563543a 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 Pfam PF00664 ABC transporter transmembrane region 17 280 4.3E-39 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 SUPERFAMILY SSF52540 326 569 2.95E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 Pfam PF00005 ABC transporter 350 497 3.8E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 Gene3D G3DSA:3.40.50.300 331 563 3.5E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 SUPERFAMILY SSF90123 4 317 4.84E-66 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 Gene3D G3DSA:1.20.1560.10 4 313 4.2E-63 T 25-04-2016 APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 SMART SM00382 359 545 4.3E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03640 874efa9daa2d842adfedb5beb6b9fb38 578 PANTHER PTHR24221 1 578 2.6E-178 T 25-04-2016 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 Pfam PF02142 MGS-like domain 14 128 6.9E-26 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 Gene3D G3DSA:3.40.140.20 239 359 2.0E-46 T 25-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 Gene3D G3DSA:3.40.50.1380 2 186 8.1E-85 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 SMART SM00851 14 129 5.0E-54 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 448 2.5E-114 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 Gene3D G3DSA:3.40.140.20 365 505 2.0E-55 T 25-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 PIRSF PIRSF000414 1 515 1.6E-208 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 SUPERFAMILY SSF52335 2 194 3.43E-71 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 SMART SM00798 134 450 3.1E-189 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 515 44.323 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 515 1.3E-212 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 PANTHER PTHR11692 1 515 6.1E-301 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 PANTHER PTHR11692:SF2 1 515 6.1E-301 T 25-04-2016 APQ13_RS07405 8bd8951c4bac47766d8e3ccc9cdd9aae 515 SUPERFAMILY SSF53927 208 515 3.31E-119 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 Gene3D G3DSA:1.10.10.10 79 163 1.6E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 SUPERFAMILY SSF53155 4 85 2.55E-19 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 SUPERFAMILY SSF46767 79 160 7.46E-28 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 Gene3D G3DSA:2.30.37.60 9 71 8.3E-4 T 25-04-2016 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 PANTHER PTHR10815:SF5 1 164 7.1E-53 T 25-04-2016 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 68 1.7E-5 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 81 159 1.1E-29 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 80 158 4.0E-32 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 PANTHER PTHR10815 1 164 7.1E-53 T 25-04-2016 APQ13_RS00360 ae663a3aff4ed55c4a8c6382be7daa24 164 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 25-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 157 9.4E-66 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 Pfam PF00731 AIR carboxylase 5 150 4.7E-65 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 Gene3D G3DSA:3.40.50.7700 2 161 7.4E-76 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 PANTHER PTHR23046 1 162 1.7E-90 T 25-04-2016 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 PANTHER PTHR23046:SF2 1 162 1.7E-90 T 25-04-2016 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 SMART SM01001 3 154 5.3E-100 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 PIRSF PIRSF001338 1 162 6.8E-70 T 25-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 SUPERFAMILY SSF52255 4 160 2.75E-66 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APQ13_RS07365 52ff1d449eba4ed832658a7de53fd766 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 32.444 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 507 530 5.8E-27 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 464 488 5.8E-27 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 439 461 5.8E-27 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 SUPERFAMILY SSF54001 409 543 9.42E-25 T 25-04-2016 APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 Pfam PF08481 GBS Bsp-like repeat 156 207 3.5E-11 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 Pfam PF08481 GBS Bsp-like repeat 221 309 5.3E-27 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 Pfam PF08481 GBS Bsp-like repeat 325 408 1.5E-23 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 Pfam PF08481 GBS Bsp-like repeat 34 121 3.4E-25 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS03950 16c697fc800f48ef1a97cccf482e2dec 544 Pfam PF05257 CHAP domain 436 514 9.7E-13 T 25-04-2016 IPR007921 CHAP domain APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 235 1.4E-10 T 25-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 SUPERFAMILY SSF55120 2 233 1.18E-75 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 PANTHER PTHR13767 2 292 2.8E-109 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 178 1.9E-53 T 25-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 215 2.5E-74 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 292 18.723 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS02595 37e02ffd7ef9ae4859ce197f0652a51f 293 PANTHER PTHR13767:SF2 2 292 2.8E-109 T 25-04-2016 APQ13_RS01285 885b05487e991b5c79f13cf6c2d3bc2b 183 Gene3D G3DSA:3.30.1830.10 42 174 1.2E-33 T 25-04-2016 IPR009736 Protein of unknown function DUF1307 APQ13_RS01285 885b05487e991b5c79f13cf6c2d3bc2b 183 PANTHER PTHR40578:SF1 5 174 1.2E-21 T 25-04-2016 APQ13_RS01285 885b05487e991b5c79f13cf6c2d3bc2b 183 Pfam PF06998 Protein of unknown function (DUF1307) 42 169 1.2E-37 T 25-04-2016 IPR009736 Protein of unknown function DUF1307 APQ13_RS01285 885b05487e991b5c79f13cf6c2d3bc2b 183 PANTHER PTHR40578 5 174 1.2E-21 T 25-04-2016 APQ13_RS01285 885b05487e991b5c79f13cf6c2d3bc2b 183 SUPERFAMILY SSF160704 39 173 2.88E-28 T 25-04-2016 IPR009736 Protein of unknown function DUF1307 APQ13_RS01285 885b05487e991b5c79f13cf6c2d3bc2b 183 PIRSF PIRSF006187 9 174 5.4E-55 T 25-04-2016 IPR009736 Protein of unknown function DUF1307 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 SUPERFAMILY SSF81271 287 371 8.28E-36 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PANTHER PTHR23305:SF12 1 371 1.0E-202 T 25-04-2016 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 371 1.2E-146 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Gene3D G3DSA:1.10.150.300 135 205 6.8E-30 T 25-04-2016 IPR023192 TGS-like domain APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Pfam PF01926 50S ribosome-binding GTPase 5 113 1.1E-23 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PIRSF PIRSF006641 1 371 1.3E-153 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PANTHER PTHR23305 1 371 1.0E-202 T 25-04-2016 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.3E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.3E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.3E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.3E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Gene3D G3DSA:3.40.50.300 206 274 1.4E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Gene3D G3DSA:3.40.50.300 4 134 1.4E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 SUPERFAMILY SSF52540 3 309 2.21E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 371 43.966 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Gene3D G3DSA:3.10.20.30 275 371 8.3E-50 T 25-04-2016 IPR012675 Beta-grasp domain APQ13_RS07645 aa826f88ef194ef54639b5985b4e9691 371 Pfam PF06071 Protein of unknown function (DUF933) 287 370 2.3E-40 T 25-04-2016 IPR013029 Domain of unknown function DUF933 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 6.3E-117 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 SUPERFAMILY SSF56553 48 169 2.22E-42 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 PANTHER PTHR32108 1 312 6.9E-136 T 25-04-2016 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 36.418 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 SMART SM00662 18 225 5.3E-87 T 25-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Gene3D G3DSA:1.10.150.20 244 311 9.4E-32 T 25-04-2016 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 SUPERFAMILY SSF47789 245 311 1.57E-23 T 25-04-2016 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 238 302 9.7E-28 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 SUPERFAMILY SSF55257 4 48 6.87E-30 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 SUPERFAMILY SSF55257 170 224 6.87E-30 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Gene3D G3DSA:3.30.1360.10 2 59 5.9E-12 T 25-04-2016 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 4.2E-21 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 PANTHER PTHR32108:SF0 1 312 6.9E-136 T 25-04-2016 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Gene3D G3DSA:2.170.120.12 60 168 2.6E-46 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 309 3.0E-26 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08530 f73d150a77236bfe156661aecc8a7265 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 150 1.8E-24 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 165 9.3E-53 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 SUPERFAMILY SSF46785 4 78 1.27E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 180 9.3E-46 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 PIRSF PIRSF019345 1 198 2.0E-51 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 SUPERFAMILY SSF46785 83 157 6.49E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 179 33.083 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 Gene3D G3DSA:1.10.10.10 83 157 1.8E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 PANTHER PTHR34298 1 197 1.3E-48 T 25-04-2016 APQ13_RS00080 93cfe01ca77ce36691d87e3b25a9aa88 198 Gene3D G3DSA:1.10.10.10 5 78 1.7E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07860 3f8e0e7406bcea6770df82e5226a0d94 95 Gene3D G3DSA:3.30.70.1060 2 83 5.6E-8 T 25-04-2016 APQ13_RS07860 3f8e0e7406bcea6770df82e5226a0d94 95 PANTHER PTHR37828 1 91 4.7E-25 T 25-04-2016 APQ13_RS07860 3f8e0e7406bcea6770df82e5226a0d94 95 PANTHER PTHR37828:SF1 1 91 4.7E-25 T 25-04-2016 APQ13_RS07860 3f8e0e7406bcea6770df82e5226a0d94 95 SUPERFAMILY SSF54909 1 84 3.75E-18 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel APQ13_RS07860 3f8e0e7406bcea6770df82e5226a0d94 95 Pfam PF03795 YCII-related domain 2 81 7.3E-14 T 25-04-2016 IPR005545 YCII-related APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 Pfam PF00265 Thymidine kinase 3 184 2.6E-48 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 Gene3D G3DSA:3.40.50.300 8 106 4.2E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 PANTHER PTHR11441 1 191 9.2E-63 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 Hamap MF_00124 Thymidine kinase [tdk]. 1 187 34.077 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 Gene3D G3DSA:3.30.60.20 140 190 6.1E-21 T 25-04-2016 APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 PIRSF PIRSF035805 1 191 2.2E-58 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 171 184 - T 25-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 SUPERFAMILY SSF52540 2 140 7.87E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02865 cdb2a09e1bf38197a59e0682d5d70ec0 191 SUPERFAMILY SSF57716 140 190 8.08E-17 T 25-04-2016 APQ13_RS07380 95566ee6ae73e5f6e21a17f4f12ae6b0 874 SUPERFAMILY SSF48452 536 665 1.49E-11 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APQ13_RS07380 95566ee6ae73e5f6e21a17f4f12ae6b0 874 Gene3D G3DSA:1.25.40.10 536 719 2.0E-13 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APQ13_RS07380 95566ee6ae73e5f6e21a17f4f12ae6b0 874 Pfam PF00931 NB-ARC domain 199 334 2.4E-10 T 25-04-2016 IPR002182 NB-ARC GO:0043531 APQ13_RS07380 95566ee6ae73e5f6e21a17f4f12ae6b0 874 Gene3D G3DSA:2.40.50.140 823 871 1.1E-4 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07380 95566ee6ae73e5f6e21a17f4f12ae6b0 874 Gene3D G3DSA:3.40.50.300 175 326 2.1E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07380 95566ee6ae73e5f6e21a17f4f12ae6b0 874 SUPERFAMILY SSF52540 177 427 2.49E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 TIGRFAM TIGR00416 sms: DNA repair protein RadA 14 461 1.6E-192 T 25-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 SMART SM00382 100 253 1.1E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 SUPERFAMILY SSF52540 78 300 2.77E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 Pfam PF13481 AAA domain 77 231 2.9E-15 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 Pfam PF13541 Subunit ChlI of Mg-chelatase 375 438 2.8E-9 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 222 250 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 133 150 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 183 207 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 92 120 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 331 354 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 23 47 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PRINTS PR01874 DNA repair protein radA signature 257 283 2.04E-87 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 PANTHER PTHR32472 15 465 3.4E-215 T 25-04-2016 APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 SUPERFAMILY SSF54211 264 278 1.71E-40 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 SUPERFAMILY SSF54211 312 465 1.71E-40 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 Gene3D G3DSA:3.40.50.300 68 285 2.9E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06275 db36aa17d6b55632bc0a37ef9b5b3805 466 Gene3D G3DSA:3.30.230.10 297 465 5.3E-35 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS03015 b575e6c1e7dcf13f970426c2f07461a3 231 PANTHER PTHR11922 30 231 1.2E-43 T 25-04-2016 APQ13_RS03015 b575e6c1e7dcf13f970426c2f07461a3 231 Gene3D G3DSA:3.40.50.880 1 230 2.0E-50 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS03015 b575e6c1e7dcf13f970426c2f07461a3 231 PANTHER PTHR11922:SF18 30 231 1.2E-43 T 25-04-2016 APQ13_RS03015 b575e6c1e7dcf13f970426c2f07461a3 231 Pfam PF07722 Peptidase C26 4 211 2.9E-71 T 25-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 APQ13_RS03015 b575e6c1e7dcf13f970426c2f07461a3 231 SUPERFAMILY SSF52317 1 227 2.22E-33 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 323 1.3E-111 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 145 4.1E-41 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 1.9E-28 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 1.9E-28 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 1.9E-28 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 302 313 1.9E-28 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 1.9E-28 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 Gene3D G3DSA:3.40.50.1370 3 142 1.1E-51 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PANTHER PTHR11405:SF44 288 326 6.0E-150 T 25-04-2016 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PANTHER PTHR11405:SF44 3 268 6.0E-150 T 25-04-2016 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 SUPERFAMILY SSF53671 3 325 3.4E-91 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 324 75.751 T 25-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 3.3E-20 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 3.3E-20 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 3.3E-20 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 3.3E-20 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 Gene3D G3DSA:3.40.50.1370 143 310 2.2E-61 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PANTHER PTHR11405 288 326 6.0E-150 T 25-04-2016 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 PANTHER PTHR11405 3 268 6.0E-150 T 25-04-2016 APQ13_RS05155 5edd5157fffd17921a4c34773243c8a0 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 321 4.5E-46 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 Gene3D G3DSA:1.10.3810.10 90 268 5.0E-68 T 25-04-2016 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 PANTHER PTHR32282:SF0 16 592 1.3E-189 T 25-04-2016 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 Pfam PF00905 Penicillin binding protein transpeptidase domain 361 659 2.3E-34 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 PANTHER PTHR32282 615 679 1.3E-189 T 25-04-2016 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 PANTHER PTHR32282 16 592 1.3E-189 T 25-04-2016 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 Gene3D G3DSA:3.40.710.10 269 679 1.0E-86 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 100 663 1.8E-162 T 25-04-2016 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 SUPERFAMILY SSF56601 303 678 1.41E-84 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 SUPERFAMILY SSF56601 248 270 1.41E-84 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 PANTHER PTHR32282:SF0 615 679 1.3E-189 T 25-04-2016 APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 SUPERFAMILY SSF53955 80 291 2.28E-67 T 25-04-2016 IPR023346 Lysozyme-like domain APQ13_RS05635 b490dda4802292455caaa8cb390eda72 743 Pfam PF00912 Transglycosylase 90 266 4.0E-60 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 308 3.0E-41 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Pfam PF03099 Biotin/lipoate A/B protein ligase family 113 207 7.9E-11 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 PANTHER PTHR12835 1 308 1.1E-62 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 SUPERFAMILY SSF50037 265 308 2.84E-6 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Gene3D G3DSA:2.30.30.100 263 308 2.1E-9 T 25-04-2016 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Pfam PF02237 Biotin protein ligase C terminal domain 263 309 2.4E-11 T 25-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Gene3D G3DSA:1.10.10.10 1 61 5.6E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Gene3D G3DSA:3.30.930.10 72 246 1.2E-45 T 25-04-2016 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Pfam PF08279 HTH domain 5 57 2.8E-15 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 309 30.461 T 25-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 SUPERFAMILY SSF55681 69 247 3.23E-46 T 25-04-2016 APQ13_RS00690 b64eab2c4a5c0d2c118addc5faf4cdfa 311 SUPERFAMILY SSF46785 3 59 8.96E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 Gene3D G3DSA:2.40.50.140 298 360 1.7E-12 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 PANTHER PTHR24220 5 307 8.8E-166 T 25-04-2016 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 Gene3D G3DSA:3.40.50.300 3 246 9.8E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 SMART SM00382 30 239 1.9E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 Pfam PF08402 TOBE domain 293 368 9.2E-8 T 25-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 PANTHER PTHR24220:SF151 5 307 8.8E-166 T 25-04-2016 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 Gene3D G3DSA:2.40.50.100 362 376 8.1E-23 T 25-04-2016 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 Gene3D G3DSA:2.40.50.100 251 297 8.1E-23 T 25-04-2016 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 SUPERFAMILY SSF52540 4 256 1.58E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 Pfam PF00005 ABC transporter 22 163 3.8E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00725 d665f5cbb18eaf27f0eb4f7e5dbea93c 377 SUPERFAMILY SSF50331 248 376 2.02E-27 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 Pfam PF00366 Ribosomal protein S17 11 78 9.7E-33 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.6E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.6E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.6E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 25-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 SUPERFAMILY SSF50249 6 83 2.74E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 2.3E-35 T 25-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 24.457 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 Gene3D G3DSA:2.40.50.140 6 83 6.5E-35 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 PANTHER PTHR10744 5 85 6.0E-40 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08445 3b9c7c133d10d07e3f120273d3c7c9ab 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 1.0E-35 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 TIGRFAM TIGR01231 lacC: tagatose-6-phosphate kinase 1 310 1.4E-186 T 25-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 Hamap MF_01557 Tagatose-6-phosphate kinase [lacC]. 1 310 60.066 T 25-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 PANTHER PTHR10584:SF178 1 310 6.9E-157 T 25-04-2016 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 SUPERFAMILY SSF53613 1 287 2.65E-67 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 3 307 1.2E-96 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 Gene3D G3DSA:3.40.1190.20 35 309 1.0E-78 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 PANTHER PTHR10584 1 310 6.9E-157 T 25-04-2016 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 Gene3D G3DSA:2.20.150.10 9 34 1.9E-4 T 25-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 PIRSF PIRSF000535 1 310 1.6E-137 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APQ13_RS01045 16a5931fcd836942d0ff6bc04d9cfb6d 310 Pfam PF00294 pfkB family carbohydrate kinase 7 292 8.5E-67 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Pfam PF04898 Glutamate synthase central domain 451 726 4.8E-102 T 25-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Pfam PF00310 Glutamine amidotransferases class-II 23 424 1.7E-158 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 PANTHER PTHR11938:SF1 12 1465 0.0 T 25-04-2016 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 SUPERFAMILY SSF69336 1206 1459 1.26E-81 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 SUPERFAMILY SSF56235 23 428 9.12E-140 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Gene3D G3DSA:3.20.20.70 822 1186 1.3E-164 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Pfam PF01645 Conserved region in glutamate synthase 788 1155 3.8E-146 T 25-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Gene3D G3DSA:3.20.20.70 437 773 1.5E-86 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Gene3D G3DSA:2.160.20.60 1207 1475 5.6E-90 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Gene3D G3DSA:3.60.20.10 23 434 1.8E-158 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 PANTHER PTHR11938 12 1465 0.0 T 25-04-2016 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 Pfam PF01493 GXGXG motif 1228 1412 9.8E-70 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APQ13_RS06080 0620fefb0cb06a330f04d3744f8a44e5 1505 SUPERFAMILY SSF51395 432 1183 4.49E-238 T 25-04-2016 APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 SMART SM00487 17 207 1.6E-42 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 SUPERFAMILY SSF52540 67 337 9.93E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 PANTHER PTHR24031:SF334 11 354 5.9E-101 T 25-04-2016 APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 SMART SM00490 242 323 9.3E-19 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 Pfam PF00271 Helicase conserved C-terminal domain 230 323 5.9E-19 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 Gene3D G3DSA:3.40.50.300 5 199 1.5E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 Gene3D G3DSA:3.40.50.300 200 343 1.4E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 Pfam PF00270 DEAD/DEAH box helicase 22 181 4.9E-38 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APQ13_RS01520 f0fdd7f43ee40b8b4538457e5f03679f 360 PANTHER PTHR24031 11 354 5.9E-101 T 25-04-2016 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 SUPERFAMILY SSF101353 249 454 1.22E-66 T 25-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 Pfam PF02272 DHHA1 domain 804 869 2.2E-10 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 SUPERFAMILY SSF50447 486 555 4.94E-14 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 855 1.4E-294 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 872 170.14 T 25-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 SUPERFAMILY SSF55186 555 714 4.58E-54 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PANTHER PTHR11777 1 870 0.0 T 25-04-2016 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 SMART SM00863 656 699 1.0E-21 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 Gene3D G3DSA:3.30.930.10 4 244 9.2E-87 T 25-04-2016 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 PANTHER PTHR11777:SF9 1 870 0.0 T 25-04-2016 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 SUPERFAMILY SSF55681 5 248 4.22E-79 T 25-04-2016 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 Pfam PF01411 tRNA synthetases class II (A) 8 559 4.5E-186 T 25-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APQ13_RS04780 9e2b55b6700c9f1e4f5c7956bf858499 872 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 698 4.2E-20 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 759 1.3E-54 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 SUPERFAMILY SSF52540 548 836 4.53E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Gene3D G3DSA:3.40.50.300 162 344 8.5E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 338 2.9E-11 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 SUPERFAMILY SSF52540 160 543 1.37E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Gene3D G3DSA:1.10.1780.10 1 149 9.0E-23 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 SMART SM01086 766 857 8.7E-26 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 PANTHER PTHR11638 1 860 0.0 T 25-04-2016 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 SUPERFAMILY SSF81923 3 157 2.22E-25 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 841 2.8E-19 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Gene3D G3DSA:1.10.8.60 347 423 7.4E-28 T 25-04-2016 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 PANTHER PTHR11638:SF18 1 860 0.0 T 25-04-2016 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 143 2.1E-7 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 66 0.0017 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 6.0E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 6.0E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 6.0E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 6.0E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Gene3D G3DSA:1.10.8.60 778 859 7.5E-24 T 25-04-2016 APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 SMART SM00382 200 345 1.9E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 SMART SM00382 595 743 6.7E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01350 eeb932007abcef01121b685e003c9604 860 Gene3D G3DSA:3.40.50.300 551 777 1.4E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 SUPERFAMILY SSF51735 1115 1392 5.11E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:3.40.50.720 1115 1400 2.9E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:3.30.300.30 901 1001 9.0E-24 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Pfam PF00501 AMP-binding enzyme 541 906 2.5E-77 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 557 929 6.6E-98 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 SUPERFAMILY SSF47336 5 77 2.22E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Pfam PF13745 HxxPF-repeated domain 410 495 1.4E-8 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:3.40.50.980 534 666 1.5E-39 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 SUPERFAMILY SSF52777 279 517 3.78E-36 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 PANTHER PTHR24095:SF137 6 1079 2.9E-169 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Pfam PF00668 Condensation domain 113 388 4.5E-51 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Pfam PF00550 Phosphopantetheine attachment site 1019 1078 8.6E-8 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Pfam PF00550 Phosphopantetheine attachment site 13 76 1.5E-9 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:2.30.38.10 822 895 2.6E-17 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Pfam PF07993 Male sterility protein 1117 1356 2.9E-49 T 25-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1039 1054 - T 25-04-2016 IPR006162 Phosphopantetheine attachment site APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:3.40.50.980 667 820 5.9E-36 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 SUPERFAMILY SSF52777 115 273 3.11E-23 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:1.10.1200.10 1007 1084 1.5E-12 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 Gene3D G3DSA:1.10.1200.10 4 78 2.3E-15 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 ProSitePatterns PS00455 Putative AMP-binding domain signature. 657 668 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 SUPERFAMILY SSF56801 515 1004 3.4E-107 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 PANTHER PTHR24095 6 1079 2.9E-169 T 25-04-2016 APQ13_RS01690 a111ba994129a7e2873e2845b057bf7e 1470 SUPERFAMILY SSF47336 1010 1079 6.54E-9 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 4.4E-18 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.8E-43 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 Gene3D G3DSA:3.30.1390.10 53 122 1.9E-28 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 SUPERFAMILY SSF54736 56 122 1.1E-21 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 SUPERFAMILY SSF48300 3 51 1.7E-13 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 94 6.0E-14 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 Gene3D G3DSA:1.20.5.710 2 52 3.7E-20 T 25-04-2016 APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 6.1E-27 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APQ13_RS03410 36f08638178691d1954aaff5d50db64a 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.418 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS00215 eb6d948290d0aaf5bd2f3e0268910350 124 Gene3D G3DSA:3.10.180.10 1 121 3.3E-31 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS00215 eb6d948290d0aaf5bd2f3e0268910350 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 117 1.1E-5 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APQ13_RS00215 eb6d948290d0aaf5bd2f3e0268910350 124 SUPERFAMILY SSF54593 2 123 1.2E-22 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS00215 eb6d948290d0aaf5bd2f3e0268910350 124 PANTHER PTHR35006 1 121 2.6E-42 T 25-04-2016 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 501 563 1.5E-10 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Gene3D G3DSA:3.40.120.10 20 215 5.3E-58 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 SUPERFAMILY SSF53738 227 312 6.67E-20 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Gene3D G3DSA:3.40.120.10 308 454 5.2E-38 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 SUPERFAMILY SSF55957 511 570 1.7E-14 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 SUPERFAMILY SSF55957 444 481 1.7E-14 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 SUPERFAMILY SSF53738 26 236 4.32E-44 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 225 311 1.3E-23 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Gene3D G3DSA:3.40.120.10 230 307 6.7E-23 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 451 2.2E-22 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Gene3D G3DSA:3.30.310.50 480 570 3.3E-24 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 PANTHER PTHR22573:SF54 20 570 1.7E-231 T 25-04-2016 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 138 147 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 SUPERFAMILY SSF53738 304 454 1.06E-30 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 PANTHER PTHR22573 20 570 1.7E-231 T 25-04-2016 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 178 4.1E-38 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 7.2E-5 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS02910 60a97171e3523e110e370e910a265c38 571 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 137 151 7.2E-5 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 Gene3D G3DSA:3.30.1240.10 88 184 2.8E-15 T 25-04-2016 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 Gene3D G3DSA:3.40.50.1000 185 272 1.7E-59 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 Gene3D G3DSA:3.40.50.1000 1 75 1.7E-59 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 266 1.5E-64 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 PANTHER PTHR10000:SF16 1 272 1.6E-78 T 25-04-2016 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 25-04-2016 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 266 3.6E-62 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 SUPERFAMILY SSF56784 1 271 2.76E-69 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 PANTHER PTHR10000 1 272 1.6E-78 T 25-04-2016 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 239 3.0E-27 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS05795 8409c800b34d02979d14f476fa8c40bd 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS02715 a0a952ac0dbc999cb8741f5b4359e2b2 358 PANTHER PTHR32196:SF30 8 353 9.6E-96 T 25-04-2016 APQ13_RS02715 a0a952ac0dbc999cb8741f5b4359e2b2 358 PANTHER PTHR32196 8 353 9.6E-96 T 25-04-2016 APQ13_RS02715 a0a952ac0dbc999cb8741f5b4359e2b2 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 338 1.7E-38 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 PIRSF PIRSF001435 2 202 3.5E-49 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 Gene3D G3DSA:1.10.1670.10 125 201 4.4E-29 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 SUPERFAMILY SSF48150 5 201 1.57E-67 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 Hamap MF_00942 Endonuclease III [nth]. 2 203 35.414 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 SMART SM00478 40 188 4.5E-62 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 TIGRFAM TIGR01083 nth: endonuclease III 6 197 3.0E-75 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 PANTHER PTHR10359 9 197 4.7E-75 T 25-04-2016 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 172 5.9E-27 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 25-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 Pfam PF00633 Helix-hairpin-helix motif 102 129 7.9E-9 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APQ13_RS00370 935472f507db6cd7db159fc4fd8293a6 207 Gene3D G3DSA:1.10.340.30 24 124 1.7E-39 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APQ13_RS06265 9316e9f5c972f7c237e0ff9c978ed05d 237 PANTHER PTHR31801 6 230 1.4E-41 T 25-04-2016 APQ13_RS06265 9316e9f5c972f7c237e0ff9c978ed05d 237 Pfam PF01987 Mitochondrial biogenesis AIM24 12 218 5.6E-49 T 25-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 APQ13_RS06265 9316e9f5c972f7c237e0ff9c978ed05d 237 PANTHER PTHR31801:SF0 6 230 1.4E-41 T 25-04-2016 APQ13_RS06265 9316e9f5c972f7c237e0ff9c978ed05d 237 Gene3D G3DSA:3.60.160.10 2 232 6.6E-78 T 25-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 APQ13_RS06265 9316e9f5c972f7c237e0ff9c978ed05d 237 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 6 234 4.0E-38 T 25-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 APQ13_RS06265 9316e9f5c972f7c237e0ff9c978ed05d 237 SUPERFAMILY SSF51219 6 231 8.37E-65 T 25-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain APQ13_RS05485 711c7370b323f056fa8a7cd80df87ce3 182 SUPERFAMILY SSF69754 3 111 3.92E-29 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APQ13_RS05485 711c7370b323f056fa8a7cd80df87ce3 182 Gene3D G3DSA:3.30.160.100 3 95 9.0E-32 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APQ13_RS05485 711c7370b323f056fa8a7cd80df87ce3 182 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 125 178 3.6E-24 T 25-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal APQ13_RS05485 711c7370b323f056fa8a7cd80df87ce3 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 1.0E-27 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APQ13_RS05485 711c7370b323f056fa8a7cd80df87ce3 182 PANTHER PTHR33231 1 182 3.8E-55 T 25-04-2016 APQ13_RS05485 711c7370b323f056fa8a7cd80df87ce3 182 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 103 5.5E-29 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APQ13_RS04790 2d701767bc679679af5feabf942dd58f 333 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 295 19.203 T 25-04-2016 IPR023059 Foldase protein PrsA GO:0003755 APQ13_RS04790 2d701767bc679679af5feabf942dd58f 333 Gene3D G3DSA:3.10.50.40 142 238 4.4E-5 T 25-04-2016 APQ13_RS04790 2d701767bc679679af5feabf942dd58f 333 SUPERFAMILY SSF54534 145 237 4.87E-7 T 25-04-2016 APQ13_RS04790 2d701767bc679679af5feabf942dd58f 333 Pfam PF13145 PPIC-type PPIASE domain 131 249 1.8E-16 T 25-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APQ13_RS04790 2d701767bc679679af5feabf942dd58f 333 SUPERFAMILY SSF109998 28 174 5.1E-21 T 25-04-2016 IPR027304 Trigger factor/SurA domain APQ13_RS08150 d2728ec6fd7be8b023497a346f6004c2 264 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS08150 d2728ec6fd7be8b023497a346f6004c2 264 PANTHER PTHR30204 3 116 1.1E-17 T 25-04-2016 APQ13_RS08150 d2728ec6fd7be8b023497a346f6004c2 264 SUPERFAMILY SSF46955 7 115 4.03E-22 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS08150 d2728ec6fd7be8b023497a346f6004c2 264 Pfam PF00376 MerR family regulatory protein 9 47 5.5E-14 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS08150 d2728ec6fd7be8b023497a346f6004c2 264 SMART SM00422 8 78 3.6E-10 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS08150 d2728ec6fd7be8b023497a346f6004c2 264 Gene3D G3DSA:1.10.1660.10 8 119 9.5E-22 T 25-04-2016 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Gene3D G3DSA:2.40.30.10 305 396 7.4E-45 T 25-04-2016 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PRINTS PR00315 GTP-binding elongation factor signature 81 91 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PRINTS PR00315 GTP-binding elongation factor signature 97 108 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Gene3D G3DSA:3.40.50.300 3 212 1.0E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PANTHER PTHR23115:SF112 1 397 3.5E-242 T 25-04-2016 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 1.0E-31 T 25-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 8.6E-59 T 25-04-2016 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 SUPERFAMILY SSF52540 6 222 5.68E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 SUPERFAMILY SSF50465 306 397 3.74E-35 T 25-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 2.5E-17 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Gene3D G3DSA:2.40.30.10 213 302 4.7E-38 T 25-04-2016 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 SUPERFAMILY SSF50447 208 305 4.37E-29 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 59.417 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 PANTHER PTHR23115 1 397 3.5E-242 T 25-04-2016 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 6.5E-13 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS04495 6f100b6a6d6e3229a4d2b0b4be0fa2cc 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 6.8E-222 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 PANTHER PTHR11252 1 712 0.0 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SMART SM00322 555 620 2.8E-11 T 25-04-2016 IPR004087 K Homology domain GO:0003676 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 696 29.244 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 323 2.2E-11 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Gene3D G3DSA:3.30.230.70 7 222 1.1E-79 T 25-04-2016 IPR027408 PNPase/RNase PH domain APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Gene3D G3DSA:3.30.230.70 314 545 4.2E-84 T 25-04-2016 IPR027408 PNPase/RNase PH domain APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF55666 453 551 1.31E-28 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 4.2E-13 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF03725 3' exoribonuclease family, domain 2 462 532 1.2E-7 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SMART SM00316 623 693 3.6E-25 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 PANTHER PTHR11252:SF0 1 712 0.0 T 25-04-2016 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF55666 143 233 2.23E-28 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 PIRSF PIRSF005499 1 727 2.9E-284 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF50249 614 697 8.57E-21 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF46915 236 323 1.41E-12 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Gene3D G3DSA:2.40.50.140 622 696 2.2E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF00575 S1 RNA binding domain 622 693 2.4E-19 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF54211 10 142 5.57E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF54791 559 641 9.48E-17 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF00013 KH domain 560 615 3.4E-9 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF01138 3' exoribonuclease family, domain 1 326 459 3.3E-14 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Pfam PF01138 3' exoribonuclease family, domain 1 13 142 3.9E-18 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 SUPERFAMILY SSF54211 297 490 1.11E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Gene3D G3DSA:3.30.1370.10 554 621 2.1E-22 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 Gene3D G3DSA:1.10.10.400 228 313 2.6E-34 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS06995 7c664f01c2a111c2c47cc904cad1931d 730 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 694 7.5E-299 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF81665 331 424 2.75E-16 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF81665 189 234 2.75E-16 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF81665 677 725 2.75E-16 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PANTHER PTHR24093:SF50 1 741 1.9E-253 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 162 737 3.5E-199 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 647 4.7E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 431 445 4.7E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 4.7E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 4.7E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 663 4.7E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 4.7E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 433 439 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF56784 429 449 2.31E-60 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF56784 486 735 2.31E-60 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 202 706 5.1E-101 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 ProSitePatterns PS01229 Hypothetical cof family signature 2. 628 650 - T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Pfam PF00403 Heavy-metal-associated domain 5 65 4.4E-15 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Pfam PF00702 haloacid dehalogenase-like hydrolase 427 642 1.4E-47 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF55008 3 72 5.76E-21 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Gene3D G3DSA:2.70.150.10 191 331 8.5E-35 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 SUPERFAMILY SSF81653 234 330 6.54E-30 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00943 Copper-transporting ATPase signature 605 622 1.6E-15 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00943 Copper-transporting ATPase signature 200 219 1.6E-15 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00943 Copper-transporting ATPase signature 414 429 1.6E-15 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00943 Copper-transporting ATPase signature 220 238 1.6E-15 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00943 Copper-transporting ATPase signature 353 367 1.6E-15 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PRINTS PR00943 Copper-transporting ATPase signature 147 166 1.6E-15 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Gene3D G3DSA:3.30.70.100 3 84 3.4E-24 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 145 738 1.8E-192 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 PANTHER PTHR24093 1 741 1.9E-253 T 25-04-2016 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Pfam PF00122 E1-E2 ATPase 201 422 2.1E-72 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Gene3D G3DSA:3.40.50.1000 556 697 5.6E-57 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Gene3D G3DSA:3.40.50.1000 402 447 5.6E-57 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05805 61868a481f4b34e701a546dbf533656c 742 Gene3D G3DSA:3.40.1110.10 448 555 8.2E-23 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 41.257 T 25-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Pfam PF12804 MobA-like NTP transferase domain 5 187 1.0E-20 T 25-04-2016 IPR025877 MobA-like NTP transferase APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 452 6.3E-176 T 25-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 SUPERFAMILY SSF51161 255 446 7.75E-47 T 25-04-2016 IPR011004 Trimeric LpxA-like APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 PANTHER PTHR22572 4 448 1.2E-218 T 25-04-2016 APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 SUPERFAMILY SSF53448 4 252 3.34E-62 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Gene3D G3DSA:2.160.10.10 333 451 8.0E-35 T 25-04-2016 APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 428 2.4E-6 T 25-04-2016 IPR001451 Hexapeptide repeat APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 350 1.0E-4 T 25-04-2016 IPR001451 Hexapeptide repeat APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Gene3D G3DSA:3.90.550.10 1 244 6.8E-76 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 PANTHER PTHR22572:SF115 4 448 1.2E-218 T 25-04-2016 APQ13_RS00435 cbc2e0b241473f636e360ea61be6944a 459 Gene3D G3DSA:2.160.10.10 245 332 1.9E-16 T 25-04-2016 APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 Gene3D G3DSA:3.40.640.10 108 326 4.1E-56 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 PANTHER PTHR11751:SF294 90 351 6.3E-64 T 25-04-2016 APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 PANTHER PTHR11751 90 351 6.3E-64 T 25-04-2016 APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 SUPERFAMILY SSF53383 96 355 2.07E-49 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 Pfam PF00155 Aminotransferase class I and II 110 351 2.4E-15 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 SUPERFAMILY SSF46785 3 77 3.15E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 Gene3D G3DSA:1.10.10.10 3 69 1.4E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 3.6E-11 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS03435 84701036b6f7ec727da54a1e774a39d9 420 SMART SM00345 8 67 2.0E-11 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 SUPERFAMILY SSF51246 300 356 1.96E-16 T 25-04-2016 IPR011054 Rudiment single hybrid motif APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 SUPERFAMILY SSF52440 4 86 1.87E-24 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 Gene3D G3DSA:3.30.1490.20 117 178 4.2E-19 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 Gene3D G3DSA:3.30.470.20 179 356 4.2E-64 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 PANTHER PTHR11609 1 356 6.2E-128 T 25-04-2016 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 Pfam PF02222 ATP-grasp domain 111 276 1.3E-46 T 25-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 SUPERFAMILY SSF56059 101 297 1.1E-54 T 25-04-2016 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 6 351 40.707 T 25-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 PANTHER PTHR11609:SF5 1 356 6.2E-128 T 25-04-2016 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 6 355 1.0E-109 T 25-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APQ13_RS07360 9fc06cd55db4904af0e9c90429740847 363 Gene3D G3DSA:3.40.50.20 3 110 4.5E-34 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS05970 71e8490a2cf7017ff8d6f00a11537dcd 141 PIRSF PIRSF021328 1 141 6.5E-53 T 25-04-2016 IPR016787 Uncharacterised conserved protein UCP021328 APQ13_RS05970 71e8490a2cf7017ff8d6f00a11537dcd 141 Pfam PF11208 Protein of unknown function (DUF2992) 3 141 5.4E-42 T 25-04-2016 IPR016787 Uncharacterised conserved protein UCP021328 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 PANTHER PTHR33989:SF6 1 441 1.9E-245 T 25-04-2016 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 Pfam PF02378 Phosphotransferase system, EIIC 28 348 5.4E-72 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 Gene3D G3DSA:3.40.50.270 464 567 1.8E-21 T 25-04-2016 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 PANTHER PTHR33989 1 441 1.9E-245 T 25-04-2016 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 SUPERFAMILY SSF52794 466 567 1.52E-18 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 423 5.5E-77 T 25-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 467 538 1.4E-10 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 421 561 4.5E-62 T 25-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 APQ13_RS01060 08e9127d8e4d15dfa4286492539e1f98 568 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 11 422 2.4E-238 T 25-04-2016 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 APQ13_RS02500 80f0dee78b08c025cdb6e1baf1f58532 187 PANTHER PTHR10681 43 177 1.2E-23 T 25-04-2016 APQ13_RS02500 80f0dee78b08c025cdb6e1baf1f58532 187 SUPERFAMILY SSF52833 1 186 8.55E-35 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS02500 80f0dee78b08c025cdb6e1baf1f58532 187 Pfam PF08534 Redoxin 39 175 3.6E-27 T 25-04-2016 IPR013740 Redoxin GO:0016491 APQ13_RS02500 80f0dee78b08c025cdb6e1baf1f58532 187 PANTHER PTHR10681:SF104 43 177 1.2E-23 T 25-04-2016 APQ13_RS02500 80f0dee78b08c025cdb6e1baf1f58532 187 Gene3D G3DSA:3.40.30.10 4 186 4.2E-45 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Pfam PF00889 Elongation factor TS 71 325 2.4E-66 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Gene3D G3DSA:1.10.8.10 2 55 2.9E-26 T 25-04-2016 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 SUPERFAMILY SSF54713 251 325 3.71E-36 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 SUPERFAMILY SSF54713 179 208 3.71E-36 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 SUPERFAMILY SSF54713 57 92 3.71E-36 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Gene3D G3DSA:1.10.286.20 242 280 2.5E-7 T 25-04-2016 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 342 1.8E-94 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Gene3D G3DSA:3.30.479.20 180 195 3.0E-31 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Gene3D G3DSA:3.30.479.20 57 93 3.0E-31 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Gene3D G3DSA:3.30.479.20 290 328 3.0E-31 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 Hamap MF_00050 Elongation factor Ts [tsf]. 1 343 66.809 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 PANTHER PTHR11741 254 345 6.6E-116 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 PANTHER PTHR11741 1 211 6.6E-116 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APQ13_RS08370 7c0d602d697ceeec78d152e33bfbe26b 348 SUPERFAMILY SSF46934 3 56 4.34E-18 T 25-04-2016 IPR009060 UBA-like GO:0005515 APQ13_RS06340 8b6472f3f57fd5f6c22cc908e063de50 162 PIRSF PIRSF011474 2 162 6.9E-63 T 25-04-2016 IPR009693 Glucitol operon activator APQ13_RS06340 8b6472f3f57fd5f6c22cc908e063de50 162 Pfam PF06923 Glucitol operon activator protein (GutM) 7 113 1.2E-35 T 25-04-2016 IPR009693 Glucitol operon activator APQ13_RS04570 e9fc9dd79553786c0fc298070f14d0ab 227 SUPERFAMILY SSF52540 1 221 7.45E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04570 e9fc9dd79553786c0fc298070f14d0ab 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 216 6.9E-80 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APQ13_RS04570 e9fc9dd79553786c0fc298070f14d0ab 227 Gene3D G3DSA:3.40.50.300 4 219 1.4E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04570 e9fc9dd79553786c0fc298070f14d0ab 227 Pfam PF02224 Cytidylate kinase 6 221 2.5E-75 T 25-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APQ13_RS04570 e9fc9dd79553786c0fc298070f14d0ab 227 PANTHER PTHR21299 6 224 1.8E-71 T 25-04-2016 APQ13_RS04570 e9fc9dd79553786c0fc298070f14d0ab 227 Hamap MF_00238 Cytidylate kinase [cmk]. 4 224 33.447 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APQ13_RS06530 ea5952d84732dae796c7b8a960ff716b 287 PANTHER PTHR12110:SF20 4 287 7.6E-102 T 25-04-2016 APQ13_RS06530 ea5952d84732dae796c7b8a960ff716b 287 Pfam PF01261 Xylose isomerase-like TIM barrel 23 233 8.7E-36 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APQ13_RS06530 ea5952d84732dae796c7b8a960ff716b 287 PANTHER PTHR12110 4 287 7.6E-102 T 25-04-2016 APQ13_RS06530 ea5952d84732dae796c7b8a960ff716b 287 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 286 2.6E-111 T 25-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 APQ13_RS06530 ea5952d84732dae796c7b8a960ff716b 287 Gene3D G3DSA:3.20.20.150 6 277 6.2E-47 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APQ13_RS06530 ea5952d84732dae796c7b8a960ff716b 287 SUPERFAMILY SSF51658 11 283 4.19E-58 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 SMART SM00363 1 64 5.3E-16 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 2.8E-47 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 PANTHER PTHR21600:SF2 1 240 1.8E-79 T 25-04-2016 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 PANTHER PTHR21600 1 240 1.8E-79 T 25-04-2016 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 Gene3D G3DSA:3.10.290.10 1 63 2.9E-26 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 SUPERFAMILY SSF55120 45 234 6.0E-45 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 Pfam PF01479 S4 domain 1 47 5.2E-14 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 SUPERFAMILY SSF55174 1 56 5.89E-16 T 25-04-2016 APQ13_RS00085 4b0f34eb018fa5ac157bee37de5bae83 240 Pfam PF00849 RNA pseudouridylate synthase 61 195 6.4E-23 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 PANTHER PTHR10099 2 235 7.2E-273 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 PANTHER PTHR10099 262 1241 7.2E-273 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SUPERFAMILY SSF56042 813 969 6.28E-14 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 976 1238 8.0E-80 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 Gene3D G3DSA:3.40.50.880 979 1215 4.8E-13 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SMART SM01211 976 1238 8.2E-104 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 Gene3D G3DSA:3.30.1330.10 647 806 1.1E-24 T 25-04-2016 IPR016188 PurM-like, N-terminal domain APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 Pfam PF02769 AIR synthase related protein, C-terminal domain 439 590 1.0E-23 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SUPERFAMILY SSF56042 440 606 5.23E-38 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 Gene3D G3DSA:3.30.1330.10 220 235 1.5E-54 T 25-04-2016 IPR016188 PurM-like, N-terminal domain APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 Gene3D G3DSA:3.30.1330.10 289 430 1.5E-54 T 25-04-2016 IPR016188 PurM-like, N-terminal domain APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SUPERFAMILY SSF52317 974 1238 4.31E-65 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SUPERFAMILY SSF55326 634 811 1.73E-36 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1238 0.0 T 25-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 PANTHER PTHR10099:SF1 2 235 7.2E-273 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 PANTHER PTHR10099:SF1 262 1241 7.2E-273 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SUPERFAMILY SSF55326 195 231 5.58E-33 T 25-04-2016 APQ13_RS07435 1e9e3cce659025110eabbc313b655353 1241 SUPERFAMILY SSF55326 303 429 5.58E-33 T 25-04-2016 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 PANTHER PTHR11410:SF7 1 238 6.3E-66 T 25-04-2016 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 16 231 2.4E-53 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 SUPERFAMILY SSF81336 70 229 2.22E-39 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 PRINTS PR00123 ATP synthase A subunit signature 162 184 3.4E-18 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 PRINTS PR00123 ATP synthase A subunit signature 146 161 3.4E-18 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 PRINTS PR00123 ATP synthase A subunit signature 215 230 3.4E-18 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 PRINTS PR00123 ATP synthase A subunit signature 78 94 3.4E-18 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 PANTHER PTHR11410 1 238 6.3E-66 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 Pfam PF00119 ATP synthase A chain 22 228 2.3E-52 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 235 13.758 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 Gene3D G3DSA:1.20.120.220 71 233 1.1E-41 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APQ13_RS00895 cc6b4a35bffddee06949f47408c533fe 239 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 25-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site APQ13_RS06070 124cd0f72939bee472b02db738b2a016 211 SUPERFAMILY SSF54106 30 75 8.11E-9 T 25-04-2016 IPR018392 LysM domain APQ13_RS06070 124cd0f72939bee472b02db738b2a016 211 SMART SM00257 31 75 4.4E-8 T 25-04-2016 IPR018392 LysM domain APQ13_RS06070 124cd0f72939bee472b02db738b2a016 211 Pfam PF01476 LysM domain 32 74 4.4E-7 T 25-04-2016 IPR018392 LysM domain APQ13_RS06070 124cd0f72939bee472b02db738b2a016 211 Pfam PF05257 CHAP domain 102 180 3.1E-15 T 25-04-2016 IPR007921 CHAP domain APQ13_RS06070 124cd0f72939bee472b02db738b2a016 211 Gene3D G3DSA:3.10.350.10 30 75 8.8E-13 T 25-04-2016 IPR018392 LysM domain APQ13_RS06070 124cd0f72939bee472b02db738b2a016 211 SUPERFAMILY SSF54001 100 210 2.75E-24 T 25-04-2016 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 9.1E-160 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 PANTHER PTHR11075:SF9 2 357 3.7E-169 T 25-04-2016 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 Gene3D G3DSA:3.30.160.20 212 285 1.7E-29 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 Pfam PF00472 RF-1 domain 213 322 9.7E-38 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 PANTHER PTHR11075 2 357 3.7E-169 T 25-04-2016 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 SMART SM00937 65 180 1.9E-60 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 Pfam PF03462 PCRF domain 11 205 1.9E-71 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 SUPERFAMILY SSF75620 10 354 1.01E-128 T 25-04-2016 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 Gene3D G3DSA:1.20.58.410 4 95 9.1E-21 T 25-04-2016 APQ13_RS02870 b212e607f3a80cbae5c19183ae59d395 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 39.386 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APQ13_RS04775 cf99f306b1bedc9bd2057f492a890446 342 PANTHER PTHR30024 7 274 1.6E-26 T 25-04-2016 APQ13_RS04775 cf99f306b1bedc9bd2057f492a890446 342 SUPERFAMILY SSF53850 47 272 3.96E-38 T 25-04-2016 APQ13_RS04775 cf99f306b1bedc9bd2057f492a890446 342 Gene3D G3DSA:3.40.190.10 141 254 1.7E-15 T 25-04-2016 APQ13_RS04775 cf99f306b1bedc9bd2057f492a890446 342 Gene3D G3DSA:3.40.190.10 64 140 3.6E-4 T 25-04-2016 APQ13_RS04775 cf99f306b1bedc9bd2057f492a890446 342 Pfam PF09084 NMT1/THI5 like 62 270 5.5E-22 T 25-04-2016 IPR015168 SsuA/THI5-like APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 PANTHER PTHR11624:SF77 3 340 1.8E-139 T 25-04-2016 APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 Pfam PF02780 Transketolase, C-terminal domain 208 330 3.1E-38 T 25-04-2016 IPR033248 Transketolase, C-terminal domain APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 PANTHER PTHR11624 3 340 1.8E-139 T 25-04-2016 IPR033247 Transketolase family APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 Gene3D G3DSA:3.40.50.920 212 335 1.9E-43 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 SUPERFAMILY SSF52922 203 338 1.05E-41 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 SMART SM00861 5 194 8.6E-53 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 SUPERFAMILY SSF52518 7 218 2.41E-59 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 Gene3D G3DSA:3.40.50.970 4 210 2.1E-72 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01365 9cd1b74a3eb5780c3ad6ac5d13f7a421 343 Pfam PF02779 Transketolase, pyrimidine binding domain 8 193 2.1E-44 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 Gene3D G3DSA:3.30.559.10 191 415 3.6E-68 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 PANTHER PTHR23151 3 411 8.3E-126 T 25-04-2016 APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 191 415 3.9E-69 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 Pfam PF02817 e3 binding domain 130 165 3.1E-15 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 SUPERFAMILY SSF51230 1 91 8.64E-26 T 25-04-2016 IPR011053 Single hybrid motif APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 Pfam PF00364 Biotin-requiring enzyme 4 75 3.1E-19 T 25-04-2016 IPR000089 Biotin/lipoyl attachment APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 Gene3D G3DSA:4.10.320.10 121 167 6.0E-19 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 Gene3D G3DSA:2.40.50.100 1 92 7.8E-28 T 25-04-2016 APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 SUPERFAMILY SSF47005 124 167 2.75E-12 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS01370 be1eb4db6d7cf2ceb40e759909b63a91 417 SUPERFAMILY SSF52777 191 415 3.34E-68 T 25-04-2016 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 Gene3D G3DSA:3.40.390.10 322 422 6.4E-5 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 Pfam PF01432 Peptidase family M3 202 581 1.0E-79 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 SUPERFAMILY SSF55486 53 596 2.84E-133 T 25-04-2016 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 PANTHER PTHR11804 146 596 1.7E-112 T 25-04-2016 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 Pfam PF08439 Oligopeptidase F 112 181 9.3E-22 T 25-04-2016 IPR013647 Oligopeptidase F, N-terminal domain APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 5 592 1.1E-179 T 25-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 PANTHER PTHR11804:SF8 146 596 1.7E-112 T 25-04-2016 APQ13_RS04805 139f586dfd304176a220f93dba70c4df 599 Gene3D G3DSA:1.10.287.830 181 225 1.7E-17 T 25-04-2016 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SMART SM00316 105 173 2.2E-9 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SMART SM00316 15 91 6.2E-4 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SMART SM00316 192 262 2.0E-25 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SMART SM00316 277 348 6.8E-27 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SUPERFAMILY SSF50249 4 103 6.04E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SUPERFAMILY SSF50249 262 351 5.15E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Gene3D G3DSA:2.40.50.140 9 91 3.3E-10 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Gene3D G3DSA:2.40.50.140 275 349 1.7E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Gene3D G3DSA:2.40.50.140 105 174 4.2E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SUPERFAMILY SSF50249 105 186 1.47E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Pfam PF00575 S1 RNA binding domain 14 74 2.7E-5 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Pfam PF00575 S1 RNA binding domain 275 348 1.4E-23 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Pfam PF00575 S1 RNA binding domain 191 262 2.6E-21 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Pfam PF00575 S1 RNA binding domain 106 173 3.2E-11 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 128 145 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 292 311 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 214 235 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 17 35 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 157 177 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 110 126 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PRINTS PR00681 Ribosomal protein S1 signature 331 349 2.0E-37 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 Gene3D G3DSA:2.40.50.140 194 274 1.1E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 SUPERFAMILY SSF50249 192 279 2.24E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02355 5207e4fc39778662ae6d9b55a2b8249b 399 PANTHER PTHR10724 118 363 7.0E-90 T 25-04-2016 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 Pfam PF00005 ABC transporter 351 499 1.8E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 PANTHER PTHR24221:SF195 17 578 2.0E-167 T 25-04-2016 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 Gene3D G3DSA:3.40.50.300 334 562 1.5E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 SMART SM00382 359 545 3.2E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 PANTHER PTHR24221 17 578 2.0E-167 T 25-04-2016 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 SUPERFAMILY SSF52540 328 567 2.39E-84 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 SUPERFAMILY SSF90123 6 320 1.57E-44 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 Pfam PF00664 ABC transporter transmembrane region 44 283 6.6E-13 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02530 6ce4fc2f372486182b6c9806c4932fca 581 Gene3D G3DSA:1.20.1560.10 6 320 5.1E-35 T 25-04-2016 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 172 6.9E-44 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 10 176 6.1E-45 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 SUPERFAMILY SSF50486 9 181 7.85E-51 T 25-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 4 176 24.213 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 Gene3D G3DSA:3.10.300.10 8 182 4.6E-53 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 PANTHER PTHR10429 11 192 3.5E-51 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 APQ13_RS07865 71c93142e8d4be96d798e1cb075adcba 192 PANTHER PTHR10429:SF0 11 192 3.5E-51 T 25-04-2016 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 PANTHER PTHR30204:SF4 1 112 1.1E-19 T 25-04-2016 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.8E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.8E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.8E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 PANTHER PTHR30204 1 112 1.1E-19 T 25-04-2016 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 SMART SM00422 1 69 7.9E-21 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 SUPERFAMILY SSF46955 1 112 2.09E-24 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 Gene3D G3DSA:1.10.1660.10 1 114 8.5E-30 T 25-04-2016 APQ13_RS04440 f13f4532aecdd8a049bd767d9a9274ce 127 Pfam PF13411 MerR HTH family regulatory protein 1 66 5.8E-18 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 SUPERFAMILY SSF102645 1 226 1.96E-49 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 Gene3D G3DSA:3.40.50.10300 1 226 2.2E-49 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 PANTHER PTHR14359 1 96 4.5E-65 T 25-04-2016 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 PANTHER PTHR14359 117 225 4.5E-65 T 25-04-2016 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 PANTHER PTHR14359:SF22 1 96 4.5E-65 T 25-04-2016 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 PANTHER PTHR14359:SF22 117 225 4.5E-65 T 25-04-2016 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 191 8.7E-31 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APQ13_RS02925 a61d7aa9109f85eae3f47daf9d8fe6b8 228 TIGRFAM TIGR02114 coaB_strep: phosphopantothenate--cysteine ligase 1 227 2.1E-103 T 25-04-2016 IPR011848 Phosphopantothenate--cysteine ligase APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 Gene3D G3DSA:1.20.120.140 222 306 9.6E-25 T 25-04-2016 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 SMART SM00963 197 278 5.7E-20 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 PANTHER PTHR11564:SF16 187 495 1.2E-127 T 25-04-2016 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 SMART SM00382 293 446 1.4E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 222 493 8.9E-107 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 SUPERFAMILY SSF52540 295 494 8.87E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 221 495 60.851 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 SMART SM00962 294 495 7.2E-112 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 Pfam PF00448 SRP54-type protein, GTPase domain 295 494 1.7E-75 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 Pfam PF02881 SRP54-type protein, helical bundle domain 208 274 2.1E-11 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 PANTHER PTHR11564 187 495 1.2E-127 T 25-04-2016 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 SUPERFAMILY SSF47364 195 272 4.45E-17 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 468 481 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS04370 f391214b2b07b67792635e88b96e0df5 498 Gene3D G3DSA:3.40.50.300 307 495 8.9E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 SUPERFAMILY SSF47240 26 169 3.9E-40 T 25-04-2016 IPR009078 Ferritin-like superfamily APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 147 165 1.2E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 1.2E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 74 90 1.2E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 Gene3D G3DSA:1.20.1260.10 22 173 2.0E-50 T 25-04-2016 IPR012347 Ferritin-related APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 ProSitePatterns PS00818 Dps protein family signature 1. 50 66 - T 25-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 PIRSF PIRSF005900 11 175 1.1E-41 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 Pfam PF00210 Ferritin-like domain 30 172 2.2E-29 T 25-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 PANTHER PTHR30295 8 173 1.7E-44 T 25-04-2016 APQ13_RS05260 4e8747101eaed080f7cf7db027f57279 175 PANTHER PTHR30295:SF6 8 173 1.7E-44 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 Gene3D G3DSA:1.10.275.10 7 111 2.1E-38 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 459 3.0E-194 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 42.816 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 Gene3D G3DSA:1.10.40.30 380 436 2.5E-27 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 1.5E-29 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 1.5E-29 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 1.5E-29 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 1.5E-29 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 Pfam PF00206 Lyase 11 303 3.6E-74 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 9.5E-68 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 9.5E-68 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 9.5E-68 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 9.5E-68 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 9.5E-68 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 9.5E-68 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 Pfam PF14698 Argininosuccinate lyase C-terminal 368 435 2.4E-22 T 25-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 SUPERFAMILY SSF48557 8 460 4.87E-150 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 Gene3D G3DSA:1.20.200.10 112 379 5.8E-103 T 25-04-2016 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PANTHER PTHR11444:SF3 1 460 2.8E-231 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06235 545a7fb832f4a40c9f7a2b9fdbf298a5 460 PANTHER PTHR11444 1 460 2.8E-231 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Pfam PF07085 DRTGG domain 75 177 3.6E-29 T 25-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Gene3D G3DSA:1.10.10.10 13 58 6.0E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Pfam PF00571 CBS domain 203 244 0.0021 T 25-04-2016 IPR000644 CBS domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Pfam PF00571 CBS domain 253 305 1.2E-5 T 25-04-2016 IPR000644 CBS domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 57 6.3E-5 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 SMART SM00116 203 247 9.5 T 25-04-2016 IPR000644 CBS domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 SMART SM00116 258 306 0.29 T 25-04-2016 IPR000644 CBS domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Gene3D G3DSA:3.40.1390.20 67 186 1.4E-41 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 SUPERFAMILY SSF54637 327 423 3.32E-9 T 25-04-2016 IPR029069 HotDog domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Gene3D G3DSA:3.10.580.10 187 312 8.4E-20 T 25-04-2016 APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 PANTHER PTHR11911 202 302 5.1E-14 T 25-04-2016 APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 SUPERFAMILY SSF46785 3 68 2.91E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 Gene3D G3DSA:3.10.129.10 317 420 6.8E-8 T 25-04-2016 IPR029069 HotDog domain APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 SUPERFAMILY SSF75138 71 183 7.32E-29 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APQ13_RS00785 ec465a97eddfb5ac2c10cac67bb58823 427 SUPERFAMILY SSF54631 184 307 3.03E-22 T 25-04-2016 APQ13_RS05885 6647d4478658334427ed06a38bdacb7f 406 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 79 236 9.9E-45 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APQ13_RS05885 6647d4478658334427ed06a38bdacb7f 406 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 80 236 1.7E-49 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APQ13_RS05885 6647d4478658334427ed06a38bdacb7f 406 PANTHER PTHR33392 1 338 1.1E-107 T 25-04-2016 APQ13_RS05885 6647d4478658334427ed06a38bdacb7f 406 PANTHER PTHR33392:SF5 1 338 1.1E-107 T 25-04-2016 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 25-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 SMART SM00883 1 93 6.8E-38 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 SUPERFAMILY SSF50129 1 93 2.71E-26 T 25-04-2016 IPR011032 GroES-like APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 Gene3D G3DSA:2.30.33.40 2 93 5.5E-28 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 PRINTS PR00297 10kDa chaperonin signature 24 45 3.3E-21 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 PRINTS PR00297 10kDa chaperonin signature 2 17 3.3E-21 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 PRINTS PR00297 10kDa chaperonin signature 59 71 3.3E-21 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 PRINTS PR00297 10kDa chaperonin signature 80 93 3.3E-21 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 20.346 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 2.4E-25 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS08765 06dd12f2e9defcb3b6ae7731cf74ebc5 95 PANTHER PTHR10772 2 95 2.6E-25 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 5 226 4.1E-121 T 25-04-2016 IPR022501 Gallidermin ABC transporter, ATP-binding subunit APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 SUPERFAMILY SSF52540 3 211 1.67E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 PANTHER PTHR24220:SF453 6 212 5.8E-105 T 25-04-2016 APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 PANTHER PTHR24220 6 212 5.8E-105 T 25-04-2016 APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 Gene3D G3DSA:3.40.50.300 2 211 5.8E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 SMART SM00382 29 205 4.6E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04760 02c8ad66c057a2537014a08888dd4686 233 Pfam PF00005 ABC transporter 21 157 4.4E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 Gene3D G3DSA:3.40.190.10 121 220 2.3E-21 T 25-04-2016 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 PANTHER PTHR30614:SF15 31 266 1.4E-62 T 25-04-2016 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 Gene3D G3DSA:3.40.190.10 225 260 3.5E-37 T 25-04-2016 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 Gene3D G3DSA:3.40.190.10 37 120 3.5E-37 T 25-04-2016 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 PANTHER PTHR30614 31 266 1.4E-62 T 25-04-2016 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 SUPERFAMILY SSF53850 5 260 1.24E-64 T 25-04-2016 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 259 1.0E-53 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 SMART SM00079 40 261 0.0038 T 25-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APQ13_RS04055 3f3ac39fe565428e9ca59a40ea368ba3 271 SMART SM00062 40 262 5.7E-46 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 ProSitePatterns PS00785 5'-nucleotidase signature 1. 5 17 - T 25-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PANTHER PTHR11575 5 432 1.2E-96 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PANTHER PTHR11575:SF23 5 432 1.2E-96 T 25-04-2016 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 1.1E-8 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 SUPERFAMILY SSF56300 4 270 1.82E-61 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PRINTS PR01607 Apyrase family signature 184 207 1.3E-14 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PRINTS PR01607 Apyrase family signature 165 182 1.3E-14 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PRINTS PR01607 Apyrase family signature 3 21 1.3E-14 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PRINTS PR01607 Apyrase family signature 212 232 1.3E-14 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 Gene3D G3DSA:3.90.780.10 288 384 7.6E-6 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 PIRSF PIRSF036361 1 443 7.4E-183 T 25-04-2016 IPR011240 Phosphoesterase-related protein YunD APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 SUPERFAMILY SSF55816 288 440 9.61E-9 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APQ13_RS05355 887863172adf397b94fca8571a5950c6 443 Gene3D G3DSA:3.60.21.10 4 269 1.3E-55 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.6E-96 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 PANTHER PTHR21499 2 242 6.7E-111 T 25-04-2016 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 PANTHER PTHR21499:SF23 2 242 6.7E-111 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 Gene3D G3DSA:3.40.1160.10 3 238 7.8E-83 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 43.352 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 PIRSF PIRSF005650 1 245 2.2E-90 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 Pfam PF00696 Amino acid kinase family 8 217 3.8E-25 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS00480 e59a3ed07e1be3f3c172001dda40b00f 245 SUPERFAMILY SSF53633 4 238 1.83E-70 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS01935 69b3b55f3397b641325fab437969b510 188 Gene3D G3DSA:1.10.357.10 11 186 2.8E-24 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS01935 69b3b55f3397b641325fab437969b510 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 59 1.2E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01935 69b3b55f3397b641325fab437969b510 188 SUPERFAMILY SSF46689 5 69 7.09E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01935 69b3b55f3397b641325fab437969b510 188 PANTHER PTHR30055 1 182 4.5E-21 T 25-04-2016 APQ13_RS01935 69b3b55f3397b641325fab437969b510 188 PANTHER PTHR30055:SF55 1 182 4.5E-21 T 25-04-2016 APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 Gene3D G3DSA:1.10.490.50 150 234 7.4E-12 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 Pfam PF13411 MerR HTH family regulatory protein 3 61 6.8E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 PANTHER PTHR30204:SF27 3 234 1.1E-25 T 25-04-2016 APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 Pfam PF07739 TipAS antibiotic-recognition domain 115 233 3.2E-16 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 PANTHER PTHR30204 3 234 1.1E-25 T 25-04-2016 APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 SUPERFAMILY SSF46955 3 94 1.65E-23 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 SMART SM00422 1 63 7.0E-17 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 Gene3D G3DSA:1.10.1660.10 3 48 1.5E-20 T 25-04-2016 APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 SUPERFAMILY SSF89082 150 234 2.35E-14 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain APQ13_RS06965 0e7c8eb8ef517c2df31be0d4c42cfecd 235 Gene3D G3DSA:1.10.1660.10 49 95 6.0E-8 T 25-04-2016 APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 Pfam PF06418 CTP synthase N-terminus 3 267 3.5E-128 T 25-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 PANTHER PTHR11550 1 535 0.0 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 SUPERFAMILY SSF52317 289 532 2.96E-76 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 Gene3D G3DSA:3.40.50.300 1 284 5.6E-139 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 TIGRFAM TIGR00337 PyrG: CTP synthase 1 528 2.8E-249 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 SUPERFAMILY SSF52540 1 270 1.44E-124 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 Gene3D G3DSA:3.40.50.880 288 534 9.6E-96 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 Pfam PF00117 Glutamine amidotransferase class-I 302 527 3.7E-54 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APQ13_RS07180 8e6e63e888182fdbbeabbd1189d3b58b 538 Hamap MF_01227 CTP synthase [pyrG]. 2 533 51.134 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APQ13_RS08590 aa28362bf52044f3948feffde408f1ff 270 PANTHER PTHR30477:SF0 1 267 1.4E-82 T 25-04-2016 APQ13_RS08590 aa28362bf52044f3948feffde408f1ff 270 PANTHER PTHR30477 1 267 1.4E-82 T 25-04-2016 APQ13_RS08590 aa28362bf52044f3948feffde408f1ff 270 Pfam PF00950 ABC 3 transport family 8 261 7.3E-76 T 25-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APQ13_RS08590 aa28362bf52044f3948feffde408f1ff 270 SUPERFAMILY SSF81345 4 261 4.32E-37 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS08590 aa28362bf52044f3948feffde408f1ff 270 Gene3D G3DSA:1.10.3470.10 47 262 3.3E-6 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 Gene3D G3DSA:3.40.930.10 1 154 2.1E-52 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 170 252 4.5E-29 T 25-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 1.7E-36 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 171 260 5.6E-17 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 Gene3D G3DSA:3.40.50.2300 166 268 4.3E-42 T 25-04-2016 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 SUPERFAMILY SSF52794 169 267 1.15E-35 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 PANTHER PTHR30505:SF0 405 648 7.5E-262 T 25-04-2016 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 PANTHER PTHR30505:SF0 43 383 7.5E-262 T 25-04-2016 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 289 651 2.6E-111 T 25-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 PANTHER PTHR30505 405 648 7.5E-262 T 25-04-2016 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 PANTHER PTHR30505 43 383 7.5E-262 T 25-04-2016 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.7E-42 T 25-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 Pfam PF02378 Phosphotransferase system, EIIC 299 599 9.1E-23 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS03780 8192475669af83570f136bfe23d958b5 655 SUPERFAMILY SSF55804 1 147 6.02E-44 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS03545 aa794ecf558edd4aeec8684dfb14e9e3 116 Pfam PF06993 Protein of unknown function (DUF1304) 10 114 3.4E-29 T 25-04-2016 IPR009732 Protein of unknown function DUF1304 APQ13_RS03545 aa794ecf558edd4aeec8684dfb14e9e3 116 PANTHER PTHR38446 2 116 2.3E-26 T 25-04-2016 APQ13_RS03545 aa794ecf558edd4aeec8684dfb14e9e3 116 PANTHER PTHR38446:SF1 2 116 2.3E-26 T 25-04-2016 APQ13_RS01430 d0f9f52f26c71de7e1570a06c548bf6a 291 Pfam PF03358 NADPH-dependent FMN reductase 1 146 7.4E-33 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APQ13_RS01430 d0f9f52f26c71de7e1570a06c548bf6a 291 PANTHER PTHR30543:SF6 1 194 4.4E-57 T 25-04-2016 APQ13_RS01430 d0f9f52f26c71de7e1570a06c548bf6a 291 PANTHER PTHR30543 1 194 4.4E-57 T 25-04-2016 APQ13_RS01430 d0f9f52f26c71de7e1570a06c548bf6a 291 SUPERFAMILY SSF52218 1 173 6.28E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS01430 d0f9f52f26c71de7e1570a06c548bf6a 291 Gene3D G3DSA:3.40.50.360 1 182 1.1E-43 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 Pfam PF00849 RNA pseudouridylate synthase 83 235 2.2E-36 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 SMART SM00363 10 73 7.0E-14 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 Gene3D G3DSA:3.10.290.10 10 58 8.6E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 SUPERFAMILY SSF55120 67 293 1.32E-78 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 Pfam PF01479 S4 domain 10 55 3.1E-10 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 SUPERFAMILY SSF55174 9 95 1.31E-13 T 25-04-2016 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 PANTHER PTHR11079:SF71 1 293 9.7E-128 T 25-04-2016 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 PANTHER PTHR11079 1 293 9.7E-128 T 25-04-2016 APQ13_RS03865 787c4ddbb7a640a4a10c5eeabc567387 296 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 293 3.4E-97 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 Gene3D G3DSA:3.40.30.10 3 103 2.1E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 PIRSF PIRSF000077 1 104 1.1E-37 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 Pfam PF00085 Thioredoxin 3 101 1.1E-28 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 SUPERFAMILY SSF52833 4 103 3.0E-35 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 PANTHER PTHR10438 1 104 5.9E-34 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 4.2E-34 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 PRINTS PR00421 Thioredoxin family signature 19 27 8.4E-7 T 25-04-2016 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 PRINTS PR00421 Thioredoxin family signature 68 79 8.4E-7 T 25-04-2016 APQ13_RS09090 095ed444e76d94cbc1a53559cc6c5f1a 104 PRINTS PR00421 Thioredoxin family signature 27 36 8.4E-7 T 25-04-2016 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 PANTHER PTHR10314 10 401 8.3E-232 T 25-04-2016 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 394 3.4E-191 T 25-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 PIRSF PIRSF001413 1 401 3.0E-167 T 25-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 382 3.7E-44 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 PANTHER PTHR10314:SF3 10 401 8.3E-232 T 25-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 SUPERFAMILY SSF53686 6 393 1.7E-142 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 Gene3D G3DSA:3.40.50.1100 181 397 7.5E-88 T 25-04-2016 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 395 51.9 T 25-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 25-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APQ13_RS05275 71fb188a54450335939a159b973e30a1 403 Gene3D G3DSA:3.40.50.1100 101 180 1.4E-19 T 25-04-2016 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 Gene3D G3DSA:1.10.1050.10 1 96 1.4E-36 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 PANTHER PTHR11831 1 199 2.3E-82 T 25-04-2016 IPR022801 Ribosomal protein S4/S9 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 Gene3D G3DSA:3.10.290.10 97 192 6.9E-35 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 Pfam PF01479 S4 domain 93 140 8.1E-22 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 3.4E-75 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 SMART SM00363 93 157 3.3E-20 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 PANTHER PTHR11831:SF4 1 199 2.3E-82 T 25-04-2016 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 SMART SM01390 3 92 1.7E-38 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 25-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.947 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 1.2E-23 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APQ13_RS07810 cc7de239f3c7c4b4b48ba6d8c96ae61e 203 SUPERFAMILY SSF55174 3 201 3.01E-66 T 25-04-2016 APQ13_RS00130 670757f6e9240c746401c926a99987a9 216 SMART SM00014 87 199 4.3E-25 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS00130 670757f6e9240c746401c926a99987a9 216 Pfam PF01569 PAP2 superfamily 94 204 5.6E-21 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS00130 670757f6e9240c746401c926a99987a9 216 SUPERFAMILY SSF48317 10 216 2.35E-46 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS00130 670757f6e9240c746401c926a99987a9 216 Gene3D G3DSA:1.20.144.10 49 203 1.9E-31 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS00130 670757f6e9240c746401c926a99987a9 216 PANTHER PTHR14969 35 206 4.3E-28 T 25-04-2016 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 SUPERFAMILY SSF53187 289 373 1.09E-76 T 25-04-2016 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 SUPERFAMILY SSF53187 3 188 1.09E-76 T 25-04-2016 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 Pfam PF01546 Peptidase family M20/M25/M40 65 366 2.2E-24 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 PIRSF PIRSF005962 1 375 4.6E-112 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 Gene3D G3DSA:3.30.70.360 172 288 3.5E-33 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 361 1.3E-106 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 SUPERFAMILY SSF55031 172 285 9.42E-27 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 Gene3D G3DSA:3.40.630.10 289 374 4.3E-87 T 25-04-2016 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 Gene3D G3DSA:3.40.630.10 3 169 4.3E-87 T 25-04-2016 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 PANTHER PTHR11014 1 377 2.4E-139 T 25-04-2016 APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 Pfam PF07687 Peptidase dimerisation domain 173 273 7.4E-7 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS07070 0cd782438181aea1f2d0d09e285fb02a 378 PANTHER PTHR11014:SF107 1 377 2.4E-139 T 25-04-2016 APQ13_RS08790 eeec2ab346aa25333915caa0a0eb2dee 50 Pfam PF00471 Ribosomal protein L33 5 50 9.8E-16 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08790 eeec2ab346aa25333915caa0a0eb2dee 50 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 50 1.6E-12 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08790 eeec2ab346aa25333915caa0a0eb2dee 50 PANTHER PTHR15238 3 50 3.8E-21 T 25-04-2016 APQ13_RS08790 eeec2ab346aa25333915caa0a0eb2dee 50 PANTHER PTHR15238:SF9 3 50 3.8E-21 T 25-04-2016 APQ13_RS08790 eeec2ab346aa25333915caa0a0eb2dee 50 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 50 15.296 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08790 eeec2ab346aa25333915caa0a0eb2dee 50 SUPERFAMILY SSF57829 4 50 5.95E-14 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Gene3D G3DSA:3.30.70.870 384 454 4.4E-15 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 511 2.4E-198 T 25-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 SUPERFAMILY SSF50447 249 379 7.95E-29 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Gene3D G3DSA:3.40.50.300 4 270 1.3E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PANTHER PTHR23115:SF69 1 181 3.2E-232 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PANTHER PTHR23115:SF69 239 486 3.2E-232 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 SUPERFAMILY SSF54980 383 455 1.15E-16 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PANTHER PTHR23115 1 181 3.2E-232 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PANTHER PTHR23115 239 486 3.2E-232 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 157 8.0E-21 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Pfam PF16658 Class II release factor RF3, C-terminal domain 377 501 1.5E-43 T 25-04-2016 IPR032090 Peptide chain release factor 3, C-terminal APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Pfam PF00009 Elongation factor Tu GTP binding domain 9 265 1.8E-50 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Gene3D G3DSA:2.40.30.10 282 383 1.8E-26 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 239 261 6.88E-9 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 120 143 6.88E-9 T 25-04-2016 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.52E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR00315 GTP-binding elongation factor signature 62 70 2.52E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR00315 GTP-binding elongation factor signature 98 109 2.52E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR00315 GTP-binding elongation factor signature 82 92 2.52E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.52E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 SUPERFAMILY SSF52540 6 265 2.51E-86 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 514 50.11 T 25-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APQ13_RS04965 c29448fb6ab3bce37d80d4d290defca6 514 Pfam PF03144 Elongation factor Tu domain 2 303 369 1.6E-13 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 Gene3D G3DSA:3.40.1390.30 113 221 5.6E-42 T 25-04-2016 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 Gene3D G3DSA:3.40.1390.30 1 112 1.5E-39 T 25-04-2016 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 257 7.1E-58 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 SUPERFAMILY SSF102705 1 261 5.23E-81 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 PANTHER PTHR13799 1 262 3.3E-71 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 PANTHER PTHR13799:SF13 1 262 3.3E-71 T 25-04-2016 APQ13_RS01190 af9da6d15324469cc9ba52de6cb19d75 262 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 239 2.3E-68 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 59 72 1.69E-17 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 40 54 1.69E-17 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 18 34 1.69E-17 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 189 201 1.69E-17 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 SUPERFAMILY SSF53335 12 284 3.79E-86 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PANTHER PTHR30481 9 283 3.6E-82 T 25-04-2016 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PANTHER PTHR30481:SF3 9 283 3.6E-82 T 25-04-2016 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 18 264 3.1E-71 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 Gene3D G3DSA:1.10.1020.10 69 167 2.6E-33 T 25-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 TIGRFAM TIGR00571 dam: DNA adenine methylase 13 282 9.7E-86 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 Gene3D G3DSA:3.40.50.150 174 284 3.1E-59 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 Gene3D G3DSA:3.40.50.150 8 68 3.1E-59 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05465 0d0f0e6716e89e205e59bf2faee960a8 285 PIRSF PIRSF000398 9 285 6.6E-77 T 25-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.7E-66 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 Gene3D G3DSA:2.40.50.140 1 136 1.5E-61 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 SUPERFAMILY SSF50249 2 136 3.26E-47 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PANTHER PTHR11652 1 129 2.4E-69 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.419 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 PIRSF PIRSF002133 1 137 8.7E-48 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06120 da1ba199dc6391d7da7c49299ff433e2 137 Pfam PF00164 Ribosomal protein S12/S23 2 136 6.3E-39 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03610 341600a776d860620e1c7ab8b60aed3d 127 Pfam PF11457 Protein of unknown function (DUF3021) 21 126 5.6E-10 T 25-04-2016 IPR021560 Protein of unknown function DUF3021 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 Gene3D G3DSA:3.10.150.10 134 254 2.0E-31 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 1.2E-28 T 25-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 SUPERFAMILY SSF55979 253 377 1.84E-29 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 Gene3D G3DSA:3.10.150.10 3 129 9.2E-22 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 PANTHER PTHR30478 3 378 1.8E-108 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 SMART SM00480 18 373 1.9E-140 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 PIRSF PIRSF000804 2 378 3.5E-97 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 377 1.6E-89 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 SUPERFAMILY SSF55979 3 127 4.08E-17 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 SUPERFAMILY SSF55979 132 251 1.68E-23 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 1.6E-26 T 25-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 Gene3D G3DSA:3.10.150.10 259 378 5.5E-34 T 25-04-2016 APQ13_RS07655 b6609c9e099cc4e317badee68f94ca48 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 126 3.2E-25 T 25-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS04140 5e7b3e768bc7771e0e71ee8f1635d831 129 SUPERFAMILY SSF54637 14 126 2.75E-25 T 25-04-2016 IPR029069 HotDog domain APQ13_RS04140 5e7b3e768bc7771e0e71ee8f1635d831 129 PANTHER PTHR21660 9 122 3.3E-23 T 25-04-2016 APQ13_RS04140 5e7b3e768bc7771e0e71ee8f1635d831 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 121 1.3E-15 T 25-04-2016 IPR003736 Phenylacetic acid degradation-related domain APQ13_RS04140 5e7b3e768bc7771e0e71ee8f1635d831 129 Pfam PF03061 Thioesterase superfamily 39 108 2.9E-16 T 25-04-2016 IPR006683 Thioesterase domain APQ13_RS04140 5e7b3e768bc7771e0e71ee8f1635d831 129 Gene3D G3DSA:3.10.129.10 14 127 5.3E-36 T 25-04-2016 IPR029069 HotDog domain APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 SUPERFAMILY SSF51735 1 150 1.89E-30 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 PIRSF PIRSF000193 1 256 1.1E-66 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 SUPERFAMILY SSF48179 152 256 9.01E-29 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 87 8.6E-13 T 25-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 PANTHER PTHR11645 1 256 6.9E-75 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 PANTHER PTHR11645:SF0 1 256 6.9E-75 T 25-04-2016 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 Gene3D G3DSA:3.40.50.720 2 149 2.7E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 152 256 3.8E-32 T 25-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 Gene3D G3DSA:1.10.3730.10 152 256 4.2E-32 T 25-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 256 2.9E-73 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 212 234 - T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS08680 48ba097ebb951411d939843fdb69c3fd 256 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 256 23.729 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 PANTHER PTHR10366 294 348 7.8E-69 T 25-04-2016 APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 PANTHER PTHR10366 14 275 7.8E-69 T 25-04-2016 APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 SUPERFAMILY SSF51735 13 345 1.35E-63 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 Gene3D G3DSA:3.40.50.720 14 338 1.1E-53 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 16 243 7.8E-29 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 PANTHER PTHR10366:SF124 294 348 7.8E-69 T 25-04-2016 APQ13_RS06005 dac4b5b52e9862ab2cc06b8481578a77 348 PANTHER PTHR10366:SF124 14 275 7.8E-69 T 25-04-2016 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 ProSitePatterns PS00579 Ribosomal protein L29 signature. 46 60 - T 25-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 67 16.441 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 Gene3D G3DSA:1.10.287.310 10 67 1.9E-24 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 PANTHER PTHR10916 1 66 5.9E-21 T 25-04-2016 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 SUPERFAMILY SSF46561 10 67 1.44E-19 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 PANTHER PTHR10916:SF0 1 66 5.9E-21 T 25-04-2016 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 Pfam PF00831 Ribosomal L29 protein 11 66 9.8E-23 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08440 f8bf06ba0b084c48f7d97140e98de2d8 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 12 66 6.1E-24 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:2.10.270.10 1323 1412 3.0E-18 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:2.10.270.10 1259 1322 1.2E-14 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:2.10.270.10 1187 1258 5.1E-12 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:2.10.270.10 185 237 2.4E-7 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF69360 1090 1309 6.41E-40 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:2.10.270.10 1094 1154 4.5E-15 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Pfam PF02324 Glycosyl hydrolase family 70 295 1091 0.0 T 25-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF69360 184 239 1.57E-6 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF51445 631 704 4.45E-29 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF51445 425 597 4.45E-29 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF51445 259 306 4.45E-29 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:3.20.20.80 409 603 1.1E-24 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:3.20.20.80 636 691 1.1E-24 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 4 25 2.0E-5 T 25-04-2016 IPR022263 KxYKxGKxW signal peptide APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Pfam PF01473 Putative cell wall binding repeat 1117 1135 4.8E-4 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Pfam PF01473 Putative cell wall binding repeat 1374 1392 0.0042 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1189 1251 2.5E-17 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1318 1382 2.3E-21 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1253 1316 2.6E-22 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1126 1184 1.3E-14 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF51445 855 1009 1.49E-26 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 SUPERFAMILY SSF69360 1301 1412 8.63E-25 T 25-04-2016 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:3.20.20.80 1155 1184 1.5E-20 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03200 79f89a1244aa7a5f8e4ab24729f4dded 1455 Gene3D G3DSA:3.20.20.80 878 961 1.5E-20 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS04575 12bdce78a88b9d14ea888f39b4da55ea 160 Gene3D G3DSA:3.10.350.10 115 159 2.8E-4 T 25-04-2016 IPR018392 LysM domain APQ13_RS04575 12bdce78a88b9d14ea888f39b4da55ea 160 SUPERFAMILY SSF54106 112 149 4.97E-5 T 25-04-2016 IPR018392 LysM domain APQ13_RS04575 12bdce78a88b9d14ea888f39b4da55ea 160 Pfam PF01476 LysM domain 115 159 1.4E-4 T 25-04-2016 IPR018392 LysM domain APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 25-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 PANTHER PTHR30266 1 127 5.1E-36 T 25-04-2016 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 123 7.7E-35 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 126 1.3E-31 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 5.0E-7 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 5.0E-7 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 5.0E-7 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 PANTHER PTHR30266:SF2 1 127 5.1E-36 T 25-04-2016 APQ13_RS04035 e400158191c3e9c15e075e46a41e8ff9 127 SUPERFAMILY SSF81330 10 119 3.27E-27 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 Gene3D G3DSA:3.20.20.140 69 417 3.4E-90 T 25-04-2016 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 Gene3D G3DSA:2.30.40.10 1 68 1.0E-22 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 PANTHER PTHR11647 1 421 7.8E-159 T 25-04-2016 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 25-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 Pfam PF01979 Amidohydrolase family 50 418 1.0E-31 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 SUPERFAMILY SSF51338 2 53 1.07E-21 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 SUPERFAMILY SSF51338 366 421 1.07E-21 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 421 6.2E-103 T 25-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 25-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 SUPERFAMILY SSF51556 54 364 1.15E-88 T 25-04-2016 IPR032466 Metal-dependent hydrolase APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 422 36.453 T 25-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02295 f53d04dbeeac4faf93da0fd4aff9c410 422 PANTHER PTHR11647:SF70 1 421 7.8E-159 T 25-04-2016 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 SUPERFAMILY SSF55874 288 427 3.93E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 SMART SM00387 319 431 4.5E-31 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 276 2.3E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 6.0E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 6.0E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 6.0E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PANTHER PTHR24423 1 8 8.6E-63 T 25-04-2016 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PANTHER PTHR24423 207 427 8.6E-63 T 25-04-2016 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 Gene3D G3DSA:3.30.565.10 288 427 4.3E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PANTHER PTHR24423:SF546 1 8 8.6E-63 T 25-04-2016 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 PANTHER PTHR24423:SF546 207 427 8.6E-63 T 25-04-2016 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 SMART SM00388 209 276 2.2E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 427 9.8E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 Gene3D G3DSA:1.10.287.130 205 272 5.9E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS02670 f8f4470bd85a434d5def2b45fd3730c9 431 SUPERFAMILY SSF47384 201 275 4.32E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 Gene3D G3DSA:1.10.580.10 12 234 2.8E-80 T 25-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 SUPERFAMILY SSF48256 4 372 8.77E-127 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 Gene3D G3DSA:1.10.230.10 235 319 2.0E-33 T 25-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PANTHER PTHR11739 6 372 1.5E-149 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 372 1.0E-145 T 25-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 ProSitePatterns PS00480 Citrate synthase signature. 255 267 - T 25-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PRINTS PR00143 Citrate synthase signature 124 137 8.4E-47 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PRINTS PR00143 Citrate synthase signature 195 223 8.4E-47 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PRINTS PR00143 Citrate synthase signature 305 321 8.4E-47 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PRINTS PR00143 Citrate synthase signature 325 339 8.4E-47 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PRINTS PR00143 Citrate synthase signature 173 188 8.4E-47 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PRINTS PR00143 Citrate synthase signature 248 268 8.4E-47 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 355 2.4E-125 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PANTHER PTHR11739:SF4 6 372 1.5E-149 T 25-04-2016 APQ13_RS04680 e4582826e15453e878e39b0d13a3a53c 372 PIRSF PIRSF001369 1 372 1.6E-158 T 25-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APQ13_RS04360 295df3f7097e78ca28de35330f0abaaa 271 Pfam PF09323 Domain of unknown function (DUF1980) 1 177 7.9E-59 T 25-04-2016 IPR015402 Protein of unknown function DUF1980 APQ13_RS04360 295df3f7097e78ca28de35330f0abaaa 271 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 19 266 8.9E-49 T 25-04-2016 IPR015402 Protein of unknown function DUF1980 APQ13_RS04360 295df3f7097e78ca28de35330f0abaaa 271 PANTHER PTHR40047 1 271 4.0E-69 T 25-04-2016 APQ13_RS04730 81abaa05f7f54c2c205b181e6397fd34 86 PANTHER PTHR10245:SF50 9 76 2.1E-33 T 25-04-2016 APQ13_RS04730 81abaa05f7f54c2c205b181e6397fd34 86 PANTHER PTHR10245 9 76 2.1E-33 T 25-04-2016 APQ13_RS04730 81abaa05f7f54c2c205b181e6397fd34 86 SUPERFAMILY SSF47413 3 74 5.36E-18 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS04730 81abaa05f7f54c2c205b181e6397fd34 86 Gene3D G3DSA:1.10.260.40 9 69 4.9E-21 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS04730 81abaa05f7f54c2c205b181e6397fd34 86 Pfam PF01381 Helix-turn-helix 13 65 1.2E-14 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS04730 81abaa05f7f54c2c205b181e6397fd34 86 SMART SM00530 12 67 1.2E-12 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 Pfam PF12833 Helix-turn-helix domain 208 285 1.8E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 SMART SM00342 201 284 1.6E-21 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 SUPERFAMILY SSF46689 237 287 3.19E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 1.0E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 1.0E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 Gene3D G3DSA:1.10.10.60 237 290 2.3E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 Gene3D G3DSA:1.10.10.60 190 232 1.5E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 PANTHER PTHR11019 35 145 2.7E-20 T 25-04-2016 APQ13_RS01425 be3effb7ec1c45adf2847eee9ba3c1a4 292 PANTHER PTHR11019 172 292 2.7E-20 T 25-04-2016 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 8 306 1.3E-97 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 PANTHER PTHR10285:SF7 268 306 2.5E-125 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 PANTHER PTHR10285:SF7 1 252 2.5E-125 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 SUPERFAMILY SSF52540 3 305 1.75E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 86 233 4.2E-15 T 25-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 PANTHER PTHR10285 268 306 2.5E-125 T 25-04-2016 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 PANTHER PTHR10285 1 252 2.5E-125 T 25-04-2016 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 146.363 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 PIRSF PIRSF000545 1 306 1.2E-134 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APQ13_RS02680 6400069a6f7f32515c3a584ade0588d0 306 Gene3D G3DSA:3.40.50.300 7 306 1.5E-101 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 PIRSF PIRSF000446 1 306 4.4E-104 T 25-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 Gene3D G3DSA:3.30.70.250 123 194 1.2E-26 T 25-04-2016 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 SUPERFAMILY SSF55048 128 195 1.83E-15 T 25-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 303 8.1E-37 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 PANTHER PTHR10982 1 306 7.1E-132 T 25-04-2016 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 Pfam PF00698 Acyl transferase domain 6 288 6.7E-38 T 25-04-2016 IPR014043 Acyl transferase APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 Gene3D G3DSA:3.40.366.10 195 301 1.9E-71 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 Gene3D G3DSA:3.40.366.10 2 120 1.9E-71 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 287 6.6E-101 T 25-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 SUPERFAMILY SSF52151 4 120 4.19E-74 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APQ13_RS09645 0a989ef8f7ebab42c6b7c7a20dfdd995 306 SUPERFAMILY SSF52151 188 304 4.19E-74 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 SUPERFAMILY SSF52540 2 223 1.0E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 PANTHER PTHR24220 3 235 2.2E-85 T 25-04-2016 APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 Pfam PF00005 ABC transporter 17 160 1.3E-24 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 Gene3D G3DSA:3.40.50.300 1 223 1.4E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 SMART SM00382 26 208 5.8E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03075 d4820906c9600e7d2d5a7764c7599775 248 PANTHER PTHR24220:SF160 3 235 2.2E-85 T 25-04-2016 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 PANTHER PTHR11548:SF1 12 279 1.6E-118 T 25-04-2016 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 Gene3D G3DSA:3.30.572.10 7 279 1.4E-64 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 Pfam PF00303 Thymidylate synthase 8 279 3.0E-64 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 PANTHER PTHR11548 12 279 1.6E-118 T 25-04-2016 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 PRINTS PR00108 Thymidylate synthase family signature 122 141 1.7E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 PRINTS PR00108 Thymidylate synthase family signature 54 75 1.7E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 PRINTS PR00108 Thymidylate synthase family signature 171 197 1.7E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 PRINTS PR00108 Thymidylate synthase family signature 209 226 1.7E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 ProSitePatterns PS00091 Thymidylate synthase active site. 133 162 - T 25-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 SUPERFAMILY SSF55831 3 278 4.45E-71 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS03475 c97b2e52912bf2743db82b36f8702737 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 30.341 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APQ13_RS01820 427e3150fd0898893643daa946a10070 296 Pfam PF03668 P-loop ATPase protein family 6 288 2.8E-104 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 APQ13_RS01820 427e3150fd0898893643daa946a10070 296 PIRSF PIRSF005052 6 291 4.0E-108 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 APQ13_RS01820 427e3150fd0898893643daa946a10070 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 288 41.768 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 APQ13_RS01820 427e3150fd0898893643daa946a10070 296 PANTHER PTHR30448 1 295 7.4E-151 T 25-04-2016 APQ13_RS01820 427e3150fd0898893643daa946a10070 296 PANTHER PTHR30448:SF0 1 295 7.4E-151 T 25-04-2016 APQ13_RS01820 427e3150fd0898893643daa946a10070 296 SUPERFAMILY SSF52540 8 160 3.86E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01820 427e3150fd0898893643daa946a10070 296 Gene3D G3DSA:3.40.50.300 4 160 9.5E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04815 382f0ce1bae53f0dd158f3c40859b2d0 297 Gene3D G3DSA:3.40.50.1820 16 293 1.3E-53 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04815 382f0ce1bae53f0dd158f3c40859b2d0 297 SUPERFAMILY SSF53474 27 293 2.94E-31 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04815 382f0ce1bae53f0dd158f3c40859b2d0 297 PANTHER PTHR23024:SF41 38 282 7.0E-20 T 25-04-2016 APQ13_RS04815 382f0ce1bae53f0dd158f3c40859b2d0 297 PANTHER PTHR23024 38 282 7.0E-20 T 25-04-2016 APQ13_RS04815 382f0ce1bae53f0dd158f3c40859b2d0 297 Pfam PF07859 alpha/beta hydrolase fold 44 261 2.4E-10 T 25-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 252 31.4 T 25-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 SUPERFAMILY SSF51366 8 251 4.0E-75 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 Gene3D G3DSA:3.20.20.70 5 251 4.5E-83 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 PANTHER PTHR22854:SF2 2 250 3.2E-87 T 25-04-2016 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 PANTHER PTHR22854 2 250 3.2E-87 T 25-04-2016 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 47 65 - T 25-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APQ13_RS05285 e58acc2c1a330d2f7e0833b04cc8521c 255 Pfam PF00218 Indole-3-glycerol phosphate synthase 19 250 1.1E-83 T 25-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 Gene3D G3DSA:2.40.110.10 121 214 2.2E-7 T 25-04-2016 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 Gene3D G3DSA:1.10.540.10 12 106 5.2E-13 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 SUPERFAMILY SSF56645 9 214 1.05E-27 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 105 4.3E-10 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 PANTHER PTHR10909:SF121 12 220 9.0E-21 T 25-04-2016 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 PANTHER PTHR10909:SF121 245 255 9.0E-21 T 25-04-2016 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 PANTHER PTHR10909 12 220 9.0E-21 T 25-04-2016 APQ13_RS03400 690da9d553fc97a20b414b27b52998ca 355 PANTHER PTHR10909 245 255 9.0E-21 T 25-04-2016 APQ13_RS00110 a7b58783f94737abcb70058c182c5897 275 Pfam PF13349 Putative adhesin 52 244 6.2E-22 T 25-04-2016 IPR025164 Putative adhesin APQ13_RS00020 3997b1b398f2099e9d5eeca88cf4c467 92 PANTHER PTHR10029 1 89 8.2E-19 T 25-04-2016 APQ13_RS00020 3997b1b398f2099e9d5eeca88cf4c467 92 Pfam PF00708 Acylphosphatase 1 90 1.1E-22 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APQ13_RS00020 3997b1b398f2099e9d5eeca88cf4c467 92 Gene3D G3DSA:3.30.70.100 1 89 2.8E-25 T 25-04-2016 APQ13_RS00020 3997b1b398f2099e9d5eeca88cf4c467 92 SUPERFAMILY SSF54975 1 90 2.18E-22 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APQ13_RS00020 3997b1b398f2099e9d5eeca88cf4c467 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 25-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APQ13_RS01695 428faa70946021956c54552939a05e98 405 PANTHER PTHR23513 2 405 3.5E-66 T 25-04-2016 APQ13_RS01695 428faa70946021956c54552939a05e98 405 SUPERFAMILY SSF103473 9 400 3.27E-43 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS01695 428faa70946021956c54552939a05e98 405 Gene3D G3DSA:1.20.1250.20 12 190 3.1E-21 T 25-04-2016 APQ13_RS01695 428faa70946021956c54552939a05e98 405 Pfam PF07690 Major Facilitator Superfamily 11 362 1.2E-26 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS01695 428faa70946021956c54552939a05e98 405 PANTHER PTHR23513:SF4 2 405 3.5E-66 T 25-04-2016 APQ13_RS01695 428faa70946021956c54552939a05e98 405 Gene3D G3DSA:1.20.1250.20 212 400 4.0E-11 T 25-04-2016 APQ13_RS08810 6491848a8c551cce4f6d970567381ab4 254 Pfam PF09359 VTC domain 11 236 2.8E-39 T 25-04-2016 IPR018966 VTC domain APQ13_RS08810 6491848a8c551cce4f6d970567381ab4 254 SUPERFAMILY SSF55154 14 237 7.85E-9 T 25-04-2016 IPR033469 CYTH-like domain APQ13_RS00135 7bdb56451bf11c05141fed5dfbc50950 120 PANTHER PTHR33931:SF2 2 112 7.6E-23 T 25-04-2016 APQ13_RS00135 7bdb56451bf11c05141fed5dfbc50950 120 Pfam PF03788 LrgA family 15 107 1.3E-26 T 25-04-2016 IPR005538 LrgA/CidA family GO:0016021 APQ13_RS00135 7bdb56451bf11c05141fed5dfbc50950 120 PANTHER PTHR33931 2 112 7.6E-23 T 25-04-2016 APQ13_RS08740 080586a7d2cf79f1084e103c7c38112e 143 PANTHER PTHR33799 2 142 1.9E-13 T 25-04-2016 APQ13_RS08740 080586a7d2cf79f1084e103c7c38112e 143 Gene3D G3DSA:3.40.50.510 1 140 7.9E-30 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APQ13_RS08740 080586a7d2cf79f1084e103c7c38112e 143 SUPERFAMILY SSF53062 1 132 7.06E-28 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APQ13_RS08740 080586a7d2cf79f1084e103c7c38112e 143 PANTHER PTHR33799:SF1 2 142 1.9E-13 T 25-04-2016 APQ13_RS08740 080586a7d2cf79f1084e103c7c38112e 143 Pfam PF03610 PTS system fructose IIA component 4 120 2.1E-23 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 Pfam PF00571 CBS domain 35 71 3.6E-6 T 25-04-2016 IPR000644 CBS domain APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 Pfam PF00571 CBS domain 92 138 1.0E-8 T 25-04-2016 IPR000644 CBS domain APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 SUPERFAMILY SSF54631 15 138 9.35E-26 T 25-04-2016 APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 Gene3D G3DSA:3.10.580.10 3 149 1.6E-31 T 25-04-2016 APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 PANTHER PTHR11911:SF103 22 150 2.3E-24 T 25-04-2016 APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 SMART SM00116 92 138 0.0091 T 25-04-2016 IPR000644 CBS domain APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 SMART SM00116 23 71 3.3 T 25-04-2016 IPR000644 CBS domain APQ13_RS00065 89c5bb0ea65c06015556cc08cf46ca84 153 PANTHER PTHR11911 22 150 2.3E-24 T 25-04-2016 APQ13_RS09635 051d0783ca6b185fdd72d8973acc5aa6 74 Pfam PF00550 Phosphopantetheine attachment site 5 69 3.2E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS09635 051d0783ca6b185fdd72d8973acc5aa6 74 Hamap MF_01217 Acyl carrier protein [acpP]. 2 73 17.51 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APQ13_RS09635 051d0783ca6b185fdd72d8973acc5aa6 74 Gene3D G3DSA:1.10.1200.10 3 72 3.0E-20 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS09635 051d0783ca6b185fdd72d8973acc5aa6 74 SUPERFAMILY SSF47336 3 72 8.38E-17 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS09635 051d0783ca6b185fdd72d8973acc5aa6 74 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 32 72 6.0E-15 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APQ13_RS00900 8d65e4bbbd029efb356efd640c25026c 165 PANTHER PTHR33445 8 165 5.2E-35 T 25-04-2016 APQ13_RS00900 8d65e4bbbd029efb356efd640c25026c 165 SUPERFAMILY SSF81573 70 127 1.44E-6 T 25-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APQ13_RS00900 8d65e4bbbd029efb356efd640c25026c 165 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 17 162 3.7E-52 T 25-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 APQ13_RS00900 8d65e4bbbd029efb356efd640c25026c 165 Gene3D G3DSA:1.20.5.620 66 105 5.5E-4 T 25-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APQ13_RS00900 8d65e4bbbd029efb356efd640c25026c 165 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 162 12.621 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APQ13_RS00900 8d65e4bbbd029efb356efd640c25026c 165 Pfam PF00430 ATP synthase B/B' CF(0) 13 142 1.3E-30 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 Pfam PF08222 CodY helix-turn-helix domain 202 260 2.2E-38 T 25-04-2016 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 PANTHER PTHR40062 2 261 1.1E-120 T 25-04-2016 APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 257 3.3E-122 T 25-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 Pfam PF06018 CodY GAF-like domain 3 182 5.7E-73 T 25-04-2016 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 261 129.056 T 25-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 Gene3D G3DSA:1.10.10.10 165 237 1.5E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 PIRSF PIRSF011572 1 261 2.6E-123 T 25-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 APQ13_RS09275 47a1ed5b8b36a755346bc1c903ed21d2 261 SUPERFAMILY SSF46785 171 260 2.83E-41 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08735 c8c7eb8db32e0c8fd19f2e23b0ad2e13 435 PANTHER PTHR30061 1 435 4.0E-35 T 25-04-2016 APQ13_RS08735 c8c7eb8db32e0c8fd19f2e23b0ad2e13 435 SUPERFAMILY SSF53850 47 431 1.28E-52 T 25-04-2016 APQ13_RS08735 c8c7eb8db32e0c8fd19f2e23b0ad2e13 435 Gene3D G3DSA:3.40.190.10 51 170 1.8E-15 T 25-04-2016 APQ13_RS08735 c8c7eb8db32e0c8fd19f2e23b0ad2e13 435 Pfam PF01547 Bacterial extracellular solute-binding protein 51 338 1.5E-29 T 25-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 APQ13_RS08735 c8c7eb8db32e0c8fd19f2e23b0ad2e13 435 Gene3D G3DSA:3.40.190.10 171 361 9.2E-26 T 25-04-2016 APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 SUPERFAMILY SSF46689 284 320 1.52E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 Gene3D G3DSA:1.10.10.60 284 319 5.2E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 PANTHER PTHR11019 200 319 3.5E-14 T 25-04-2016 APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 PANTHER PTHR11019:SF52 200 319 3.5E-14 T 25-04-2016 APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 SMART SM00342 237 318 1.9E-12 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 17 156 1.3E-6 T 25-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal APQ13_RS06445 5da1e4e8ab03f19c85129b0a62bc71bc 322 Pfam PF12833 Helix-turn-helix domain 243 319 4.1E-12 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 48 13.383 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 PANTHER PTHR15238 1 47 4.5E-17 T 25-04-2016 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 PANTHER PTHR15238:SF3 1 47 4.5E-17 T 25-04-2016 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 SUPERFAMILY SSF57829 2 47 1.95E-15 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 47 4.7E-18 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 Pfam PF00471 Ribosomal protein L33 3 47 8.1E-18 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS00555 8722380d20690ad787eec6e040cb82b6 48 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 25-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 SUPERFAMILY SSF47336 4 78 5.63E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 6.2E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 PANTHER PTHR41270:SF1 2 77 1.9E-34 T 25-04-2016 APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 Gene3D G3DSA:1.10.1200.10 1 76 3.7E-24 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 PANTHER PTHR41270 2 77 1.9E-34 T 25-04-2016 APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 77 50.777 T 25-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 APQ13_RS00185 abd55c087576e46e7a213073f7ab273f 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 74 5.3E-23 T 25-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.72 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 7.0E-16 T 25-04-2016 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.2E-30 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 PANTHER PTHR11661 1 139 1.6E-73 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.1E-26 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 SMART SM00649 9 140 1.4E-86 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 SUPERFAMILY SSF54747 3 72 1.31E-29 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 Gene3D G3DSA:3.30.1550.10 2 71 1.3E-37 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 4.8E-64 T 25-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 25-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 SUPERFAMILY SSF46906 67 139 8.24E-28 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS00470 268c60d6b18300c9e5985083937fe3a5 141 Gene3D G3DSA:1.10.10.250 72 139 5.0E-34 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS05105 cc4b6864df23fcb9395c97401a5293de 155 Pfam PF03788 LrgA family 27 120 5.8E-21 T 25-04-2016 IPR005538 LrgA/CidA family GO:0016021 APQ13_RS05105 cc4b6864df23fcb9395c97401a5293de 155 PANTHER PTHR33931:SF4 4 147 4.9E-31 T 25-04-2016 APQ13_RS05105 cc4b6864df23fcb9395c97401a5293de 155 PANTHER PTHR33931 4 147 4.9E-31 T 25-04-2016 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 Gene3D G3DSA:1.10.10.10 1 69 1.6E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 Gene3D G3DSA:1.10.60.10 72 134 1.4E-29 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 SUPERFAMILY SSF46785 1 60 7.63E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 62 130 7.6E-28 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 SMART SM00529 23 122 4.3E-37 T 25-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 SUPERFAMILY SSF47979 62 138 1.83E-26 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 PANTHER PTHR33238 1 217 1.7E-70 T 25-04-2016 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 55 1.0E-14 T 25-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 PANTHER PTHR33238:SF1 1 217 1.7E-70 T 25-04-2016 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 Pfam PF04023 FeoA domain 143 213 9.6E-6 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APQ13_RS06860 f0f2b5f62f7dad6a2d6bbd482a92359e 217 SMART SM00899 142 214 0.0012 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 PANTHER PTHR21000 1 567 0.0 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 SUPERFAMILY SSF52016 385 563 2.28E-55 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 SUPERFAMILY SSF143975 12 383 5.75E-137 T 25-04-2016 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 470 481 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 PANTHER PTHR21000:SF5 1 567 0.0 T 25-04-2016 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 Pfam PF00920 Dehydratase family 41 558 4.6E-209 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 10 561 44.826 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 24 561 2.0E-218 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS07835 de9fc5b64e9974d351b8cd616dc6037a 571 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 129 139 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 SUPERFAMILY SSF46785 14 87 1.1E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 PANTHER PTHR11751:SF384 29 109 1.6E-21 T 25-04-2016 APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 PANTHER PTHR11751 29 109 1.6E-21 T 25-04-2016 APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 Gene3D G3DSA:1.10.10.10 10 84 5.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 Gene3D G3DSA:1.20.120.530 86 228 2.0E-29 T 25-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 83 7.4E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 SMART SM00895 93 217 2.3E-9 T 25-04-2016 IPR011711 GntR, C-terminal APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 SMART SM00345 25 83 1.6E-8 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 Pfam PF07729 FCD domain 93 216 1.3E-17 T 25-04-2016 IPR011711 GntR, C-terminal APQ13_RS03165 ed1b06bcab7279ebbd77c5572f7f5615 229 SUPERFAMILY SSF48008 89 225 1.31E-19 T 25-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 ProSitePatterns PS00850 Glycine radical domain signature. 789 797 - T 25-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 Gene3D G3DSA:3.20.70.20 18 817 1.9E-276 T 25-04-2016 APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 Pfam PF01228 Glycine radical 696 800 3.7E-32 T 25-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 25 818 1.7E-278 T 25-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 Pfam PF02901 Pyruvate formate lyase-like 26 679 2.7E-209 T 25-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 PANTHER PTHR30191 25 818 0.0 T 25-04-2016 APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 SUPERFAMILY SSF51998 19 816 1.28E-233 T 25-04-2016 APQ13_RS05520 41db07800059babd99ae7a6502c1e3fa 818 PANTHER PTHR30191:SF6 25 818 0.0 T 25-04-2016 APQ13_RS02810 d4dd786ec7fca48459e2b213f445093a 158 Pfam PF01047 MarR family 35 90 3.3E-6 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS02810 d4dd786ec7fca48459e2b213f445093a 158 Gene3D G3DSA:1.10.10.10 7 132 7.7E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02810 d4dd786ec7fca48459e2b213f445093a 158 SUPERFAMILY SSF46785 10 142 2.06E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02810 d4dd786ec7fca48459e2b213f445093a 158 SMART SM00347 24 125 2.8E-11 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 Pfam PF04055 Radical SAM superfamily 26 190 1.6E-23 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 61 252 1.3E-59 T 25-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 PANTHER PTHR30352 1 255 2.2E-106 T 25-04-2016 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 Pfam PF13353 4Fe-4S single cluster domain 18 140 2.0E-13 T 25-04-2016 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 Gene3D G3DSA:3.80.30.10 84 257 1.2E-53 T 25-04-2016 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 PANTHER PTHR30352:SF4 1 255 2.2E-106 T 25-04-2016 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 25-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APQ13_RS05530 91baf35750eca278c5ed6db4badcb61d 258 SUPERFAMILY SSF102114 28 225 2.22E-21 T 25-04-2016 APQ13_RS04810 089c6591e515bf4c950512e97d12e855 312 PANTHER PTHR41265 1 311 1.0E-48 T 25-04-2016 APQ13_RS04810 089c6591e515bf4c950512e97d12e855 312 PANTHER PTHR41265:SF1 1 311 1.0E-48 T 25-04-2016 APQ13_RS04810 089c6591e515bf4c950512e97d12e855 312 Pfam PF06054 Competence protein CoiA-like family 1 263 3.0E-39 T 25-04-2016 IPR010330 Competence-induced protein CoiA-like APQ13_RS04810 089c6591e515bf4c950512e97d12e855 312 PIRSF PIRSF007487 1 312 5.4E-111 T 25-04-2016 IPR021176 Competence-induced protein CoiA-like, bacterial APQ13_RS09025 3e594659b3ff81d10af64e64e57e7550 122 PIRSF PIRSF021265 1 122 2.6E-55 T 25-04-2016 IPR010360 Protein of unknown function DUF956 APQ13_RS09025 3e594659b3ff81d10af64e64e57e7550 122 Pfam PF06115 Domain of unknown function (DUF956) 1 115 2.5E-44 T 25-04-2016 IPR010360 Protein of unknown function DUF956 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 Pfam PF00206 Lyase 7 286 2.0E-69 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 SUPERFAMILY SSF48557 3 427 2.2E-136 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.5E-9 T 25-04-2016 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.5E-9 T 25-04-2016 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.5E-9 T 25-04-2016 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 SMART SM00998 349 429 5.1E-40 T 25-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 4.7E-170 T 25-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PANTHER PTHR11444:SF2 3 424 4.1E-173 T 25-04-2016 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 Gene3D G3DSA:1.10.275.10 3 90 4.4E-37 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PANTHER PTHR11444 3 424 4.1E-173 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 Gene3D G3DSA:1.10.40.30 357 428 2.7E-33 T 25-04-2016 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 Gene3D G3DSA:1.20.200.10 91 356 2.4E-89 T 25-04-2016 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 3.6E-25 T 25-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS07330 6d636753b0a1aa623be882b517b91bb2 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 397 0.0 T 25-04-2016 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 SUPERFAMILY SSF56266 11 393 6.93E-135 T 25-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 PANTHER PTHR23100 1 397 7.0E-188 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 PANTHER PTHR23100:SF0 1 397 7.0E-188 T 25-04-2016 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 397 145.833 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 Gene3D G3DSA:3.60.70.12 5 270 9.7E-94 T 25-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 Pfam PF01960 ArgJ family 16 397 1.5E-145 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APQ13_RS04715 5e4b4f37584729eb1b83eeb3a88f5f8f 397 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 4 397 9.0E-152 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APQ13_RS04165 0db3f962b6646cd7852a45c0138e3077 462 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 205 380 2.2E-51 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APQ13_RS04165 0db3f962b6646cd7852a45c0138e3077 462 PANTHER PTHR33392:SF6 68 457 4.3E-78 T 25-04-2016 APQ13_RS04165 0db3f962b6646cd7852a45c0138e3077 462 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 204 380 4.8E-27 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APQ13_RS04165 0db3f962b6646cd7852a45c0138e3077 462 PANTHER PTHR33392 68 457 4.3E-78 T 25-04-2016 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 Hamap MF_00782 Glutathione biosynthesis bifunctional protein GshAB [gshAB]. 1 754 413.083 T 25-04-2016 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142|UniPathway: UPA00142 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 SUPERFAMILY SSF55931 2 455 3.6E-138 T 25-04-2016 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 PANTHER PTHR38761 1 465 4.3E-51 T 25-04-2016 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 SUPERFAMILY SSF56059 484 617 5.39E-30 T 25-04-2016 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 SUPERFAMILY SSF56059 653 735 5.39E-30 T 25-04-2016 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 Gene3D G3DSA:3.30.1490.20 495 568 5.7E-11 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 Pfam PF04262 Glutamate-cysteine ligase 6 246 4.3E-62 T 25-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 Pfam PF04262 Glutamate-cysteine ligase 249 326 8.5E-12 T 25-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 TIGRFAM TIGR01435 glu_cys_lig_rel: glutamate--cysteine ligase/glutathione synthase 16 742 7.3E-244 T 25-04-2016 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142|UniPathway: UPA00142 APQ13_RS06560 cbc240cf39c266f6e22ba14260ffe4bd 754 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 483 581 7.4E-6 T 25-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS02025 cfa3e4b986fa4517a4944886099c437b 104 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 88 7.6E-16 T 25-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APQ13_RS02025 cfa3e4b986fa4517a4944886099c437b 104 SUPERFAMILY SSF101386 2 89 1.31E-24 T 25-04-2016 APQ13_RS02025 cfa3e4b986fa4517a4944886099c437b 104 Gene3D G3DSA:1.10.287.1080 28 84 9.0E-4 T 25-04-2016 APQ13_RS02025 cfa3e4b986fa4517a4944886099c437b 104 PANTHER PTHR21256 1 91 4.4E-34 T 25-04-2016 APQ13_RS02025 cfa3e4b986fa4517a4944886099c437b 104 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 2 85 4.3E-31 T 25-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APQ13_RS02025 cfa3e4b986fa4517a4944886099c437b 104 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 85 17.079 T 25-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 SUPERFAMILY SSF53901 4 121 2.16E-78 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 SUPERFAMILY SSF53901 149 373 2.16E-78 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 ProSitePatterns PS00012 Phosphopantetheine attachment site. 626 641 - T 25-04-2016 IPR006162 Phosphopantetheine attachment site APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Pfam PF00668 Condensation domain 690 970 5.3E-51 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 SUPERFAMILY SSF47336 608 670 3.01E-12 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 376 2.6E-41 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Gene3D G3DSA:1.10.1200.10 600 672 8.5E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Pfam PF00550 Phosphopantetheine attachment site 615 667 2.5E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Gene3D G3DSA:3.40.47.10 264 429 1.2E-55 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 7 251 2.4E-67 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 SUPERFAMILY SSF52777 695 857 2.78E-27 T 25-04-2016 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Gene3D G3DSA:3.40.47.10 3 263 6.9E-77 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 PANTHER PTHR11712:SF288 3 500 3.8E-177 T 25-04-2016 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 SMART SM00825 Beta-ketoacyl synthase 9 430 1.2E-148 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 SUPERFAMILY SSF52777 865 1099 3.34E-30 T 25-04-2016 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 PANTHER PTHR11712 3 500 3.8E-177 T 25-04-2016 APQ13_RS01670 3dd1e1662dfd2c73cbef9838d8c4947c 1117 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 379 478 1.1E-11 T 25-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension APQ13_RS04690 08eaac3e2cacc6daeb3819b883a50671 74 Pfam PF00462 Glutaredoxin 4 58 4.8E-14 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APQ13_RS04690 08eaac3e2cacc6daeb3819b883a50671 74 PANTHER PTHR34386:SF3 4 74 1.6E-15 T 25-04-2016 APQ13_RS04690 08eaac3e2cacc6daeb3819b883a50671 74 Gene3D G3DSA:3.40.30.10 2 73 2.2E-25 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04690 08eaac3e2cacc6daeb3819b883a50671 74 SUPERFAMILY SSF52833 3 72 2.08E-19 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04690 08eaac3e2cacc6daeb3819b883a50671 74 PANTHER PTHR34386 4 74 1.6E-15 T 25-04-2016 APQ13_RS04690 08eaac3e2cacc6daeb3819b883a50671 74 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 4 73 7.5E-37 T 25-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 Pfam PF13932 GidA associated domain 404 619 1.2E-67 T 25-04-2016 IPR026904 GidA associated domain 3 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 25-04-2016 IPR020595 MnmG-related, conserved site APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 Pfam PF01134 Glucose inhibited division protein A 10 402 1.5E-163 T 25-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 Gene3D G3DSA:3.50.50.60 9 233 3.6E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 624 1.1E-272 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 SUPERFAMILY SSF51905 7 68 2.06E-40 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 SUPERFAMILY SSF51905 99 262 2.06E-40 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 627 41.302 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 SMART SM01228 549 620 3.9E-41 T 25-04-2016 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 25-04-2016 IPR020595 MnmG-related, conserved site APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 PANTHER PTHR11806 4 631 0.0 T 25-04-2016 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 PANTHER PTHR11806:SF0 4 631 0.0 T 25-04-2016 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 524 539 7.9E-7 T 25-04-2016 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 7.9E-7 T 25-04-2016 APQ13_RS07785 f85a9669ba6a05f5d5f941295e596300 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 7.9E-7 T 25-04-2016 APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 PANTHER PTHR24220:SF581 3 229 5.9E-105 T 25-04-2016 APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 Gene3D G3DSA:3.40.50.300 1 230 2.8E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 SUPERFAMILY SSF52540 2 227 1.15E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 SMART SM00382 26 211 2.3E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 PANTHER PTHR24220 3 229 5.9E-105 T 25-04-2016 APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 Pfam PF00005 ABC transporter 17 161 2.5E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06875 f42bc430b084c55bb046a22e64690e26 240 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 PANTHER PTHR11727 9 287 1.2E-95 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 273 2.0E-66 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 77 - T 25-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 18 286 56.454 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 SUPERFAMILY SSF53335 15 287 3.53E-77 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 18 284 2.6E-83 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 Gene3D G3DSA:3.40.50.150 3 211 2.3E-74 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 Gene3D G3DSA:1.10.8.100 214 287 2.2E-24 T 25-04-2016 IPR023165 rRNA adenine dimethylase-like APQ13_RS06170 042a6ecc542e96399a23f6e060d01495 291 SMART SM00650 34 210 3.9E-85 T 25-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 Pfam PF13411 MerR HTH family regulatory protein 6 73 1.0E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 SUPERFAMILY SSF55136 134 275 2.62E-5 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 Gene3D G3DSA:1.10.1660.10 4 64 4.4E-20 T 25-04-2016 APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 SMART SM00422 5 75 7.1E-11 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 PANTHER PTHR30204 1 277 1.5E-20 T 25-04-2016 APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 SUPERFAMILY SSF46955 5 109 2.86E-22 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 PANTHER PTHR30204:SF20 1 277 1.5E-20 T 25-04-2016 APQ13_RS05325 b950dcb3a6166fe1d149555057ee4e22 278 Gene3D G3DSA:1.10.1660.10 65 109 3.9E-4 T 25-04-2016 APQ13_RS07730 125b9ca01e2bc6e9f578b4ba7be48aec 415 Gene3D G3DSA:3.30.830.10 1 228 1.1E-70 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APQ13_RS07730 125b9ca01e2bc6e9f578b4ba7be48aec 415 PANTHER PTHR11851 198 402 3.5E-14 T 25-04-2016 APQ13_RS07730 125b9ca01e2bc6e9f578b4ba7be48aec 415 SUPERFAMILY SSF63411 7 211 4.48E-12 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APQ13_RS07730 125b9ca01e2bc6e9f578b4ba7be48aec 415 Pfam PF05193 Peptidase M16 inactive domain 188 351 2.9E-21 T 25-04-2016 IPR007863 Peptidase M16, C-terminal APQ13_RS07730 125b9ca01e2bc6e9f578b4ba7be48aec 415 Gene3D G3DSA:3.30.830.10 241 402 1.9E-30 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APQ13_RS07730 125b9ca01e2bc6e9f578b4ba7be48aec 415 SUPERFAMILY SSF63411 240 402 1.83E-30 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 PANTHER PTHR12029:SF31 19 180 3.3E-72 T 25-04-2016 APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 Gene3D G3DSA:3.40.1280.10 7 179 3.6E-62 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 18 168 34.126 T 25-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 PANTHER PTHR12029 19 180 3.3E-72 T 25-04-2016 APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 PIRSF PIRSF029256 17 171 4.0E-60 T 25-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 Pfam PF00588 SpoU rRNA Methylase family 19 159 2.3E-33 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APQ13_RS00105 857f8381b9a70737ef8ea591a660e60a 182 SUPERFAMILY SSF75217 19 169 2.16E-39 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 Pfam PF02080 TrkA-C domain 151 218 7.3E-15 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 SUPERFAMILY SSF116726 144 218 9.42E-15 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 PANTHER PTHR16254 1 161 1.1E-20 T 25-04-2016 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 Gene3D G3DSA:3.40.50.720 1 146 2.9E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 SUPERFAMILY SSF51735 1 146 5.31E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 PRINTS PR00335 TrkA potassium uptake protein signature 50 60 3.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 PRINTS PR00335 TrkA potassium uptake protein signature 74 88 3.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 Gene3D G3DSA:3.30.70.1450 148 218 2.0E-11 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00770 7794b51529d86fa29a8e5e3f5bba8486 219 Pfam PF02254 TrkA-N domain 3 120 9.8E-25 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 PANTHER PTHR33449 1 99 2.6E-34 T 25-04-2016 APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 4.1E-28 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 20.432 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 Gene3D G3DSA:3.30.1310.10 1 97 1.6E-29 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 PANTHER PTHR33449:SF1 1 99 2.6E-34 T 25-04-2016 APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 SUPERFAMILY SSF82607 4 95 5.75E-28 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 PIRSF PIRSF004555 1 99 1.1E-28 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APQ13_RS05955 e6b43d6842f5af23f7838162674dd3a9 99 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 90 2.6E-22 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 Pfam PF08279 HTH domain 5 58 2.9E-17 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 PANTHER PTHR30595:SF5 1 240 2.0E-46 T 25-04-2016 APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 PANTHER PTHR30595 1 240 2.0E-46 T 25-04-2016 APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 Pfam PF13280 WYL domain 131 294 3.9E-33 T 25-04-2016 IPR026881 WYL domain APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 PIRSF PIRSF016838 1 299 5.5E-25 T 25-04-2016 IPR028349 Protein PafC APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 SUPERFAMILY SSF46785 2 59 3.03E-10 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS01150 878aa4f4b346d7f8acfe56f4d9b6341e 299 Gene3D G3DSA:1.10.10.10 1 62 2.0E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04325 342f45ffa58b0c9d55bd207e4bbfe075 259 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 130 142 - T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APQ13_RS04325 342f45ffa58b0c9d55bd207e4bbfe075 259 PANTHER PTHR30589:SF0 2 259 1.2E-101 T 25-04-2016 APQ13_RS04325 342f45ffa58b0c9d55bd207e4bbfe075 259 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 249 8.8E-68 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APQ13_RS04325 342f45ffa58b0c9d55bd207e4bbfe075 259 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 252 17.917 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APQ13_RS04325 342f45ffa58b0c9d55bd207e4bbfe075 259 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 246 1.6E-78 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APQ13_RS04325 342f45ffa58b0c9d55bd207e4bbfe075 259 PANTHER PTHR30589 2 259 1.2E-101 T 25-04-2016 APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 SUPERFAMILY SSF55326 5 169 4.64E-48 T 25-04-2016 APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 331 7.7E-135 T 25-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 Gene3D G3DSA:3.90.650.10 170 339 1.3E-61 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 PANTHER PTHR10520 7 330 1.1E-189 T 25-04-2016 APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 5 340 45.612 T 25-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 162 8.6E-17 T 25-04-2016 IPR016188 PurM-like, N-terminal domain APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 Gene3D G3DSA:3.30.1330.10 20 169 1.2E-60 T 25-04-2016 IPR016188 PurM-like, N-terminal domain APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 SUPERFAMILY SSF56042 170 338 6.88E-54 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APQ13_RS07420 5bba525136865bd093a3f6d5fd0baa28 340 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 339 3.3E-36 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Pfam PF00330 Aconitase family (aconitate hydratase) 71 560 8.6E-172 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 ProSitePatterns PS01244 Aconitase family signature 2. 491 504 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 SUPERFAMILY SSF52016 630 884 3.34E-79 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 ProSitePatterns PS00450 Aconitase family signature 1. 425 441 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 363 377 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 194 207 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 270 283 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 141 154 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 491 504 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 284 297 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 208 223 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 429 440 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PRINTS PR00415 Aconitase family signature 165 173 1.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Gene3D G3DSA:3.30.499.10 17 240 4.3E-73 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Gene3D G3DSA:3.30.499.10 360 384 9.0E-61 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Gene3D G3DSA:3.30.499.10 417 572 9.0E-61 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Pfam PF00694 Aconitase C-terminal domain 688 813 4.1E-43 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 14 885 0.0 T 25-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 SUPERFAMILY SSF53732 3 625 1.18E-212 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PANTHER PTHR11670 414 709 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PANTHER PTHR11670 746 888 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PANTHER PTHR11670 3 384 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Gene3D G3DSA:3.40.1060.10 241 358 9.0E-34 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PANTHER PTHR11670:SF1 414 709 0.0 T 25-04-2016 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PANTHER PTHR11670:SF1 746 888 0.0 T 25-04-2016 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 PANTHER PTHR11670:SF1 3 384 0.0 T 25-04-2016 APQ13_RS04685 14612f03d63d06157c2e1d9752513a55 888 Gene3D G3DSA:3.20.19.10 636 883 7.7E-74 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 Pfam PF00488 MutS domain V 324 505 3.3E-34 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 PIRSF PIRSF005814 1 776 2.0E-250 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 775 8.2E-209 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 Pfam PF01713 Smr domain 701 776 2.8E-20 T 25-04-2016 IPR002625 Smr domain APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 SMART SM00463 698 776 6.8E-20 T 25-04-2016 IPR002625 Smr domain APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 SUPERFAMILY SSF160443 699 775 2.48E-10 T 25-04-2016 IPR002625 Smr domain APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 PANTHER PTHR11361:SF14 21 593 7.6E-217 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 775 19.614 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 SMART SM00534 321 506 1.7E-65 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 SUPERFAMILY SSF48334 26 279 6.41E-30 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 SMART SM00533 13 310 1.2E-6 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 403 419 - T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 SUPERFAMILY SSF52540 288 506 4.5E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 Gene3D G3DSA:3.40.50.300 289 506 1.7E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09085 c37ece49f6d4aa58e6519d2db3d612b2 776 PANTHER PTHR11361 21 593 7.6E-217 T 25-04-2016 APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.7E-66 T 25-04-2016 IPR023798 Ribosomal protein S7 domain APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 25-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 SUPERFAMILY SSF47973 1 149 3.01E-60 T 25-04-2016 IPR023798 Ribosomal protein S7 domain APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.6E-69 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 Gene3D G3DSA:1.10.455.10 7 156 1.3E-65 T 25-04-2016 IPR023798 Ribosomal protein S7 domain APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.799 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 PIRSF PIRSF002122 2 156 3.7E-56 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APQ13_RS06115 f77d044cc29bb6721badaecdd5b239c1 156 PANTHER PTHR11205 1 156 1.2E-90 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APQ13_RS01650 27f6ad5498ecdd30bee21afdcadcde92 781 Pfam PF12704 MacB-like periplasmic core domain 430 580 6.2E-7 T 25-04-2016 IPR025857 MacB-like periplasmic core domain APQ13_RS01650 27f6ad5498ecdd30bee21afdcadcde92 781 PANTHER PTHR30489 1 391 3.3E-24 T 25-04-2016 APQ13_RS01650 27f6ad5498ecdd30bee21afdcadcde92 781 Gene3D G3DSA:2.10.260.10 536 563 7.6E-4 T 25-04-2016 APQ13_RS01650 27f6ad5498ecdd30bee21afdcadcde92 781 Pfam PF02687 FtsX-like permease family 264 384 3.8E-10 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS01650 27f6ad5498ecdd30bee21afdcadcde92 781 Pfam PF02687 FtsX-like permease family 655 771 1.3E-17 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS01605 27f6ad5498ecdd30bee21afdcadcde92 781 Pfam PF12704 MacB-like periplasmic core domain 430 580 6.2E-7 T 25-04-2016 IPR025857 MacB-like periplasmic core domain APQ13_RS01605 27f6ad5498ecdd30bee21afdcadcde92 781 PANTHER PTHR30489 1 391 3.3E-24 T 25-04-2016 APQ13_RS01605 27f6ad5498ecdd30bee21afdcadcde92 781 Gene3D G3DSA:2.10.260.10 536 563 7.6E-4 T 25-04-2016 APQ13_RS01605 27f6ad5498ecdd30bee21afdcadcde92 781 Pfam PF02687 FtsX-like permease family 264 384 3.8E-10 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS01605 27f6ad5498ecdd30bee21afdcadcde92 781 Pfam PF02687 FtsX-like permease family 655 771 1.3E-17 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 Gene3D G3DSA:2.70.70.10 504 651 1.9E-57 T 25-04-2016 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 Pfam PF00367 phosphotransferase system, EIIB 11 42 1.1E-14 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 107 1.4E-13 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 5 468 1.7E-218 T 25-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 SUPERFAMILY SSF51261 502 637 2.96E-52 T 25-04-2016 IPR011055 Duplicated hybrid motif APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 Pfam PF02378 Phosphotransferase system, EIIC 111 409 2.9E-38 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 SUPERFAMILY SSF55604 8 81 3.92E-20 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 569 581 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 Gene3D G3DSA:3.30.1360.60 4 82 1.3E-24 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 PANTHER PTHR30175 1 489 0.0 T 25-04-2016 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 PANTHER PTHR30175 506 602 0.0 T 25-04-2016 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 PANTHER PTHR30175:SF4 1 489 0.0 T 25-04-2016 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 PANTHER PTHR30175:SF4 506 602 0.0 T 25-04-2016 APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 506 631 2.8E-50 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08335 424a8d6e867d3afd2b7a0ebbcde8be1c 655 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 507 627 3.0E-41 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 SUPERFAMILY SSF52540 38 72 1.15E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 660 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 SMART SM00487 14 430 5.9E-28 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Pfam PF04851 Type III restriction enzyme, res subunit 17 143 3.2E-13 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 SUPERFAMILY SSF46600 617 661 8.76E-10 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Pfam PF00271 Helicase conserved C-terminal domain 438 549 2.3E-19 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 SUPERFAMILY SSF52540 8 419 3.41E-139 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Pfam PF02151 UvrB/uvrC motif 628 661 1.2E-8 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Gene3D G3DSA:3.40.50.300 11 94 4.8E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Gene3D G3DSA:3.40.50.300 283 343 4.8E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Gene3D G3DSA:3.40.50.300 393 414 4.8E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Gene3D G3DSA:3.40.50.300 423 584 1.2E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Gene3D G3DSA:4.10.860.10 607 662 1.8E-14 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Pfam PF12344 Ultra-violet resistance protein B 556 598 1.4E-22 T 25-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 PANTHER PTHR24029 4 662 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 662 43.478 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 SMART SM00490 464 550 3.0E-20 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 Gene3D G3DSA:3.30.2060.10 164 237 2.1E-12 T 25-04-2016 APQ13_RS04075 ebbb959ef2cd8f68973c034f3161ea38 663 SUPERFAMILY SSF52540 461 591 1.15E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 SMART SM00899 1 71 0.008 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 SMART SM00899 79 151 1.2E-19 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 Pfam PF04023 FeoA domain 80 149 1.1E-13 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 Pfam PF04023 FeoA domain 3 70 1.7E-4 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 SUPERFAMILY SSF50037 82 152 2.98E-18 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 PANTHER PTHR33238 74 155 1.3E-19 T 25-04-2016 APQ13_RS05135 8f29af0f709fada419e909c42029d9df 158 SUPERFAMILY SSF50037 3 70 6.41E-7 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 14 269 3.3E-43 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 Gene3D G3DSA:3.30.1240.10 93 189 4.3E-27 T 25-04-2016 APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 SUPERFAMILY SSF56784 7 274 1.03E-58 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 Gene3D G3DSA:3.40.50.1000 190 274 1.1E-40 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 Gene3D G3DSA:3.40.50.1000 1 83 1.1E-40 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 PANTHER PTHR10000:SF27 12 276 3.3E-65 T 25-04-2016 APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 PANTHER PTHR10000 12 276 3.3E-65 T 25-04-2016 APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 242 2.4E-23 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS04380 c58998cbfa706aa8165dc8f0a18f5541 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 269 2.6E-52 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.40.50.1380 931 1053 1.5E-28 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PANTHER PTHR11405:SF5 1 1053 0.0 T 25-04-2016 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.40.50.20 532 655 2.4E-58 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 6.4E-36 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.2E-77 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SUPERFAMILY SSF56059 128 399 6.72E-106 T 25-04-2016 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:1.10.1030.10 399 531 2.2E-48 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.30.1490.20 679 737 1.9E-27 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.30.470.20 738 927 9.8E-74 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.30.470.20 200 398 6.2E-73 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SUPERFAMILY SSF56059 666 927 1.31E-101 T 25-04-2016 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PANTHER PTHR11405 1 1053 0.0 T 25-04-2016 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SMART SM00851 949 1037 5.7E-26 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1058 13.175 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.30.1490.20 142 199 6.9E-25 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Gene3D G3DSA:3.40.50.20 3 108 2.9E-44 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 3.7E-39 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Pfam PF02142 MGS-like domain 950 1037 7.1E-18 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SUPERFAMILY SSF52335 929 1049 3.01E-28 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 13.059 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SUPERFAMILY SSF52440 1 127 3.45E-50 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SMART SM01096 420 540 7.8E-66 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SMART SM01209 674 837 0.0082 T 25-04-2016 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1048 0.0 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SUPERFAMILY SSF48108 395 547 1.12E-49 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03835 0cf88eb19927aef01021409cf1b6981b 1059 SUPERFAMILY SSF52440 550 668 7.91E-46 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS05245 f32e4739a3642c89d8a37abd93b88e7b 129 SMART SM00450 31 127 3.3E-18 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS05245 f32e4739a3642c89d8a37abd93b88e7b 129 Pfam PF00581 Rhodanese-like domain 35 123 1.4E-16 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS05245 f32e4739a3642c89d8a37abd93b88e7b 129 SUPERFAMILY SSF52821 10 123 1.38E-28 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS05245 f32e4739a3642c89d8a37abd93b88e7b 129 Gene3D G3DSA:3.40.250.10 14 123 6.2E-25 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 SUPERFAMILY SSF51569 1 213 1.03E-84 T 25-04-2016 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 SMART SM01133 2 213 8.8E-104 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 PANTHER PTHR10889 1 213 1.0E-110 T 25-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 Pfam PF01791 DeoC/LacD family aldolase 5 208 8.1E-20 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 1.5E-90 T 25-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 38.076 T 25-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 PIRSF PIRSF001357 1 219 1.1E-79 T 25-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APQ13_RS02695 4f741aa2619c86155484281aa49cab34 220 Gene3D G3DSA:3.20.20.70 1 214 2.5E-93 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 PANTHER PTHR32294:SF0 2 1034 0.0 T 25-04-2016 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 SUPERFAMILY SSF89550 150 172 1.75E-7 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 SUPERFAMILY SSF89550 9 88 1.75E-7 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 242 657 1.9E-154 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 Gene3D G3DSA:3.20.20.140 9 75 3.0E-6 T 25-04-2016 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 Pfam PF02811 PHP domain 7 99 3.4E-17 T 25-04-2016 IPR004013 PHP domain GO:0003824 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 Pfam PF01336 OB-fold nucleic acid binding domain 897 959 3.0E-7 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 Gene3D G3DSA:2.40.50.140 873 962 2.9E-9 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 PANTHER PTHR32294 2 1034 0.0 T 25-04-2016 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 SMART SM00481 3 70 1.1E-8 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 Pfam PF14579 Helix-hairpin-helix motif 735 810 5.3E-10 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS02395 e33954c8bec73c755dc4146a459ed38c 1034 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 156 925 6.5E-201 T 25-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 Gene3D G3DSA:1.20.1090.10 159 362 1.8E-42 T 25-04-2016 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 SUPERFAMILY SSF56796 5 349 3.27E-53 T 25-04-2016 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 Gene3D G3DSA:3.40.50.1970 5 157 4.0E-31 T 25-04-2016 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 PANTHER PTHR11496:SF55 17 362 3.5E-37 T 25-04-2016 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 347 6.6E-36 T 25-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 PIRSF PIRSF000112 1 363 1.0E-121 T 25-04-2016 APQ13_RS01805 55ff1ab745637c034f77e26ded3c0b1f 363 PANTHER PTHR11496 17 362 3.5E-37 T 25-04-2016 APQ13_RS09265 a2078ba0bf697ad4138a8b726bf9bbfb 178 Pfam PF02632 BioY family 29 170 6.1E-35 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 APQ13_RS09265 a2078ba0bf697ad4138a8b726bf9bbfb 178 PIRSF PIRSF016661 1 173 9.4E-41 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 APQ13_RS09265 a2078ba0bf697ad4138a8b726bf9bbfb 178 PANTHER PTHR34295:SF2 1 166 1.7E-45 T 25-04-2016 APQ13_RS09265 a2078ba0bf697ad4138a8b726bf9bbfb 178 PANTHER PTHR34295 1 166 1.7E-45 T 25-04-2016 APQ13_RS01815 9ef3f7c966895da32aa45b84554f2eda 252 Pfam PF06210 Protein of unknown function (DUF1003) 117 215 1.1E-34 T 25-04-2016 IPR010406 Protein of unknown function DUF1003 APQ13_RS01815 9ef3f7c966895da32aa45b84554f2eda 252 PANTHER PTHR41386:SF1 4 252 2.9E-31 T 25-04-2016 APQ13_RS01815 9ef3f7c966895da32aa45b84554f2eda 252 PANTHER PTHR41386 4 252 2.9E-31 T 25-04-2016 APQ13_RS03220 3775fd804bfd67a9a67991c3050ac899 280 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 277 2.0E-74 T 25-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APQ13_RS03220 3775fd804bfd67a9a67991c3050ac899 280 Gene3D G3DSA:3.40.50.450 105 248 4.7E-9 T 25-04-2016 APQ13_RS03220 3775fd804bfd67a9a67991c3050ac899 280 PANTHER PTHR32039 1 279 4.1E-92 T 25-04-2016 APQ13_RS03220 3775fd804bfd67a9a67991c3050ac899 280 Pfam PF02481 DNA recombination-mediator protein A 72 269 2.3E-77 T 25-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APQ13_RS03220 3775fd804bfd67a9a67991c3050ac899 280 PANTHER PTHR32039:SF8 1 279 4.1E-92 T 25-04-2016 APQ13_RS03220 3775fd804bfd67a9a67991c3050ac899 280 SUPERFAMILY SSF102405 75 276 2.56E-33 T 25-04-2016 APQ13_RS00505 793caa67d21dc51bb9beb68912b0a4f1 321 PANTHER PTHR30473:SF1 6 316 4.5E-160 T 25-04-2016 APQ13_RS00505 793caa67d21dc51bb9beb68912b0a4f1 321 Gene3D G3DSA:3.40.50.300 110 315 1.1E-88 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00505 793caa67d21dc51bb9beb68912b0a4f1 321 PANTHER PTHR30473 6 316 4.5E-160 T 25-04-2016 APQ13_RS00505 793caa67d21dc51bb9beb68912b0a4f1 321 Pfam PF02562 PhoH-like protein 112 315 1.9E-95 T 25-04-2016 IPR003714 PhoH-like protein GO:0005524 APQ13_RS00505 793caa67d21dc51bb9beb68912b0a4f1 321 SUPERFAMILY SSF52540 111 311 1.01E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03055 9a31a314c684c05e748e411075372a21 277 Hamap MF_00361 NAD kinase [nadK]. 10 273 23.75 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APQ13_RS03055 9a31a314c684c05e748e411075372a21 277 Pfam PF01513 ATP-NAD kinase 44 233 1.8E-22 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APQ13_RS03055 9a31a314c684c05e748e411075372a21 277 Gene3D G3DSA:2.60.200.30 135 239 1.0E-30 T 25-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APQ13_RS03055 9a31a314c684c05e748e411075372a21 277 PANTHER PTHR20275 28 269 1.7E-51 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APQ13_RS03055 9a31a314c684c05e748e411075372a21 277 SUPERFAMILY SSF111331 30 271 2.49E-59 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APQ13_RS03055 9a31a314c684c05e748e411075372a21 277 Gene3D G3DSA:3.40.50.10330 41 134 4.1E-19 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PANTHER PTHR22912 3 147 1.1E-195 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PANTHER PTHR22912 163 455 1.1E-195 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 2.2E-65 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 Gene3D G3DSA:3.50.50.60 112 328 3.8E-50 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PANTHER PTHR22912:SF147 3 147 1.1E-195 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PANTHER PTHR22912:SF147 163 455 1.1E-195 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.7E-19 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 3.7E-19 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 296 3.7E-19 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 3.7E-19 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 3.7E-19 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 Gene3D G3DSA:3.30.390.30 347 456 1.8E-32 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 SUPERFAMILY SSF51905 1 181 2.89E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 SUPERFAMILY SSF51905 211 358 2.89E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 Gene3D G3DSA:3.50.50.60 2 111 1.2E-16 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 5.6E-25 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 296 5.6E-25 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 5.6E-25 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 5.6E-25 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.6E-25 T 25-04-2016 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 443 5.4E-11 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS02725 224f66a2015cff4d90392fddc3482cf3 457 SUPERFAMILY SSF55424 335 456 3.09E-31 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 PANTHER PTHR15184:SF3 1 485 7.2E-293 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Gene3D G3DSA:2.40.30.20 3 93 1.3E-34 T 25-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 PANTHER PTHR15184 1 485 7.2E-293 T 25-04-2016 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 492 3.2E-46 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 SUPERFAMILY SSF50615 10 94 2.88E-28 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 SUPERFAMILY SSF47917 372 497 2.43E-46 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 SUPERFAMILY SSF52540 95 370 1.47E-95 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 1.5E-16 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Gene3D G3DSA:3.40.50.300 94 371 1.8E-112 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 496 1.4E-245 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 PIRSF PIRSF039088 1 501 5.2E-238 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Gene3D G3DSA:1.20.150.20 372 497 1.0E-48 T 25-04-2016 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.277 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00910 07efa465df29f1c3eb11ceec81c8092b 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.9E-70 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS06540 8433a984e01a6caaeb5d9d5f001897b6 161 PANTHER PTHR30505 1 156 1.5E-39 T 25-04-2016 APQ13_RS06540 8433a984e01a6caaeb5d9d5f001897b6 161 PANTHER PTHR30505:SF10 1 156 1.5E-39 T 25-04-2016 APQ13_RS06540 8433a984e01a6caaeb5d9d5f001897b6 161 Gene3D G3DSA:3.40.930.10 9 151 4.1E-50 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06540 8433a984e01a6caaeb5d9d5f001897b6 161 SUPERFAMILY SSF55804 9 147 1.12E-31 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS06540 8433a984e01a6caaeb5d9d5f001897b6 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 1.8E-32 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS07805 2a6275f64f2b24ea7afdbedaf62ea6c9 90 Gene3D G3DSA:2.30.30.100 1 90 1.9E-30 T 25-04-2016 APQ13_RS07805 2a6275f64f2b24ea7afdbedaf62ea6c9 90 PIRSF PIRSF037257 1 90 4.5E-27 T 25-04-2016 IPR009366 Protein Veg GO:0042710 APQ13_RS07805 2a6275f64f2b24ea7afdbedaf62ea6c9 90 PANTHER PTHR40026 6 90 8.2E-22 T 25-04-2016 APQ13_RS07805 2a6275f64f2b24ea7afdbedaf62ea6c9 90 PANTHER PTHR40026:SF1 6 90 8.2E-22 T 25-04-2016 IPR009366 Protein Veg GO:0042710 APQ13_RS07805 2a6275f64f2b24ea7afdbedaf62ea6c9 90 Pfam PF06257 Biofilm formation stimulator VEG 10 86 6.1E-25 T 25-04-2016 IPR009366 Protein Veg GO:0042710 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 164 223 2.3E-22 T 25-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 Pfam PF10531 SLBB domain 77 130 1.9E-14 T 25-04-2016 IPR019554 Soluble ligand binding domain APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 SUPERFAMILY SSF47781 148 224 7.0E-33 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 PANTHER PTHR21180 73 226 2.4E-41 T 25-04-2016 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 SMART SM00278 203 222 2.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 SMART SM00278 173 192 0.042 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 Gene3D G3DSA:1.10.150.320 153 225 3.4E-24 T 25-04-2016 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 Pfam PF12836 Helix-hairpin-helix motif 163 223 8.3E-25 T 25-04-2016 APQ13_RS04905 7b2e621e3826edcacfd4d3fd008bd3a5 226 Gene3D G3DSA:3.10.560.10 66 130 1.7E-8 T 25-04-2016 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 PANTHER PTHR11468:SF3 45 756 1.3E-277 T 25-04-2016 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 Pfam PF00343 Carbohydrate phosphorylase 83 756 6.4E-254 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 600 612 - T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 SUPERFAMILY SSF53756 6 756 1.26E-246 T 25-04-2016 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 756 4.4E-264 T 25-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 PIRSF PIRSF000460 2 757 1.7E-192 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 PANTHER PTHR11468 45 756 1.3E-277 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 Gene3D G3DSA:3.40.50.2000 427 742 1.5E-114 T 25-04-2016 APQ13_RS00755 7b04a4a618ff3a590fcd27a24f82cab7 758 Gene3D G3DSA:3.40.50.2000 5 426 3.1E-134 T 25-04-2016 APQ13_RS07615 f1e93bcdf826e74ba6af7a5ec9748b8b 411 Pfam PF13354 Beta-lactamase enzyme family 196 389 7.2E-31 T 25-04-2016 APQ13_RS07615 f1e93bcdf826e74ba6af7a5ec9748b8b 411 Gene3D G3DSA:3.40.710.10 169 410 5.4E-45 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS07615 f1e93bcdf826e74ba6af7a5ec9748b8b 411 SUPERFAMILY SSF56601 174 408 1.54E-32 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 185 7.1E-21 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 356 2.7E-25 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 587 702 4.5E-34 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 517 528 3.5E-38 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 3.5E-38 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 549 3.5E-38 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 657 3.5E-38 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 3.5E-38 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 640 3.5E-38 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Pfam PF00122 E1-E2 ATPase 90 325 9.5E-67 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF81660 341 521 7.85E-49 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Gene3D G3DSA:3.40.1110.10 325 524 7.2E-57 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Gene3D G3DSA:1.20.1110.10 590 884 7.4E-118 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Gene3D G3DSA:1.20.1110.10 62 117 7.4E-118 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF81665 234 328 8.76E-127 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF81665 671 885 8.76E-127 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF81665 10 123 8.76E-127 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Gene3D G3DSA:3.40.50.1000 527 580 5.6E-4 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Pfam PF00690 Cation transporter/ATPase, N-terminus 14 77 2.2E-19 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF81653 122 233 3.79E-31 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 678 3.4E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 476 494 3.4E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 593 609 3.4E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 637 3.4E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 635 6.2E-24 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF56784 332 352 1.11E-58 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SUPERFAMILY SSF56784 473 725 1.11E-58 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Gene3D G3DSA:2.70.150.10 118 233 2.1E-41 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Gene3D G3DSA:2.70.150.10 25 61 2.1E-41 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 SMART SM00831 9 82 1.5E-22 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 Pfam PF00689 Cation transporting ATPase, C-terminus 706 882 5.9E-46 T 25-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 PANTHER PTHR24093 24 891 0.0 T 25-04-2016 APQ13_RS04455 05c7706f310e52c103e926e8a958206c 893 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 25-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 SUPERFAMILY SSF52218 4 144 6.22E-39 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 Pfam PF00258 Flavodoxin 6 133 1.8E-22 T 25-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 Gene3D G3DSA:3.40.50.360 6 144 1.2E-40 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 TIGRFAM TIGR01753 flav_short: flavodoxin 5 142 3.3E-46 T 25-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 PRINTS PR00369 Flavodoxin signature 53 64 5.5E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 PRINTS PR00369 Flavodoxin signature 5 18 5.5E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 PRINTS PR00369 Flavodoxin signature 82 92 5.5E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 PANTHER PTHR19384 1 144 1.3E-51 T 25-04-2016 APQ13_RS01880 2ed64af2fe31884514e929066d237022 147 PANTHER PTHR19384:SF81 1 144 1.3E-51 T 25-04-2016 APQ13_RS04850 e31115b7c0ac8d3903ecf0a7686fc9d7 233 PANTHER PTHR11280 1 229 5.8E-93 T 25-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APQ13_RS04850 e31115b7c0ac8d3903ecf0a7686fc9d7 233 Gene3D G3DSA:3.40.50.1360 1 231 8.1E-82 T 25-04-2016 APQ13_RS04850 e31115b7c0ac8d3903ecf0a7686fc9d7 233 SUPERFAMILY SSF100950 1 230 1.12E-79 T 25-04-2016 APQ13_RS04850 e31115b7c0ac8d3903ecf0a7686fc9d7 233 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 40.422 T 25-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APQ13_RS04850 e31115b7c0ac8d3903ecf0a7686fc9d7 233 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 20 220 2.4E-15 T 25-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APQ13_RS01180 ae86aa844a447f43c3432b9455fa5dda 231 SUPERFAMILY SSF158499 127 193 4.32E-19 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APQ13_RS01180 ae86aa844a447f43c3432b9455fa5dda 231 Pfam PF07261 Replication initiation and membrane attachment 129 200 4.0E-24 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APQ13_RS01180 ae86aa844a447f43c3432b9455fa5dda 231 PANTHER PTHR41274 1 225 5.3E-55 T 25-04-2016 APQ13_RS01180 ae86aa844a447f43c3432b9455fa5dda 231 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 127 199 3.5E-26 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APQ13_RS01180 ae86aa844a447f43c3432b9455fa5dda 231 Gene3D G3DSA:1.10.10.630 124 199 9.8E-30 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 2.6E-11 T 25-04-2016 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 2.6E-11 T 25-04-2016 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 2.6E-11 T 25-04-2016 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 2.6E-11 T 25-04-2016 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 Gene3D G3DSA:3.40.640.10 45 274 2.4E-75 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 Pfam PF00155 Aminotransferase class I and II 32 387 2.4E-72 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 Gene3D G3DSA:3.90.1150.10 275 393 4.6E-42 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 PANTHER PTHR11751 14 393 9.7E-151 T 25-04-2016 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 PANTHER PTHR11751:SF306 14 393 9.7E-151 T 25-04-2016 APQ13_RS01795 9ade06956574b0753622d6bb54f01a1e 393 SUPERFAMILY SSF53383 1 392 1.73E-110 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS06685 e38111d4d2b3c0acee85da3888507622 196 Pfam PF04892 VanZ like family 82 180 6.2E-7 T 25-04-2016 IPR006976 VanZ-like APQ13_RS07985 7d1844c05d451497f9ef9302dd54a8fa 174 SUPERFAMILY SSF51206 25 148 4.58E-24 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like APQ13_RS07985 7d1844c05d451497f9ef9302dd54a8fa 174 PANTHER PTHR24567 1 148 1.4E-13 T 25-04-2016 APQ13_RS07985 7d1844c05d451497f9ef9302dd54a8fa 174 Gene3D G3DSA:2.60.120.10 12 146 1.5E-19 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS07985 7d1844c05d451497f9ef9302dd54a8fa 174 Pfam PF00027 Cyclic nucleotide-binding domain 35 120 3.1E-9 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain APQ13_RS00640 f67c789be026405e33ce8040dd80b16f 332 Gene3D G3DSA:3.40.50.2000 126 323 2.7E-16 T 25-04-2016 APQ13_RS00640 f67c789be026405e33ce8040dd80b16f 332 SUPERFAMILY SSF53756 10 329 1.47E-49 T 25-04-2016 APQ13_RS00640 f67c789be026405e33ce8040dd80b16f 332 PANTHER PTHR12526:SF394 20 331 6.7E-34 T 25-04-2016 APQ13_RS00640 f67c789be026405e33ce8040dd80b16f 332 Pfam PF13439 Glycosyltransferase Family 4 43 140 1.5E-16 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APQ13_RS00640 f67c789be026405e33ce8040dd80b16f 332 Pfam PF00534 Glycosyl transferases group 1 153 299 1.3E-12 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 APQ13_RS00640 f67c789be026405e33ce8040dd80b16f 332 PANTHER PTHR12526 20 331 6.7E-34 T 25-04-2016 APQ13_RS00750 475c178073f0ea062bc28152e6b6c623 509 Pfam PF02446 4-alpha-glucanotransferase 10 475 2.4E-155 T 25-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APQ13_RS00750 475c178073f0ea062bc28152e6b6c623 509 Gene3D G3DSA:3.20.20.80 2 496 4.1E-175 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00750 475c178073f0ea062bc28152e6b6c623 509 PANTHER PTHR32438 2 496 9.0E-134 T 25-04-2016 APQ13_RS00750 475c178073f0ea062bc28152e6b6c623 509 PANTHER PTHR32438:SF5 2 496 9.0E-134 T 25-04-2016 APQ13_RS00750 475c178073f0ea062bc28152e6b6c623 509 SUPERFAMILY SSF51445 3 496 7.49E-165 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS00750 475c178073f0ea062bc28152e6b6c623 509 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 496 1.0E-98 T 25-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 SUPERFAMILY SSF49452 1 100 1.57E-21 T 25-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 SUPERFAMILY SSF81296 130 243 2.8E-18 T 25-04-2016 IPR014756 Immunoglobulin E-set APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 PANTHER PTHR10357 136 494 1.8E-145 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 PANTHER PTHR10357 512 625 1.8E-145 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 PANTHER PTHR10357 641 750 1.8E-145 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 PANTHER PTHR10357:SF99 136 494 1.8E-145 T 25-04-2016 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 PANTHER PTHR10357:SF99 512 625 1.8E-145 T 25-04-2016 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 PANTHER PTHR10357:SF99 641 750 1.8E-145 T 25-04-2016 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 Gene3D G3DSA:2.60.40.10 133 243 1.8E-20 T 25-04-2016 IPR013783 Immunoglobulin-like fold APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 136 228 2.7E-10 T 25-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 Pfam PF00128 Alpha amylase, catalytic domain 312 403 1.8E-9 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 Pfam PF00128 Alpha amylase, catalytic domain 434 623 7.8E-6 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 SMART SM00642 273 644 4.1E-6 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 126 752 1.2E-258 T 25-04-2016 IPR011840 Pullulanase, type I APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 Gene3D G3DSA:3.20.20.80 258 688 1.4E-87 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 Pfam PF03714 Bacterial pullanase-associated domain 4 98 2.5E-12 T 25-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 APQ13_RS00855 533884effe47c5479de1401e8f7fbdf9 771 SUPERFAMILY SSF51445 257 687 3.13E-105 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.0E-36 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.0E-36 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.0E-36 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.0E-36 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 PANTHER PTHR12220 1 135 1.3E-69 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 Gene3D G3DSA:3.90.1170.10 23 135 4.8E-53 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.959 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 SUPERFAMILY SSF54686 1 135 1.44E-54 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.4E-48 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08435 6748d681ae488c4a1da85864e4260c4b 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 6.8E-57 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 SUPERFAMILY SSF55781 235 356 1.47E-7 T 25-04-2016 IPR029016 GAF domain-like APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 SMART SM00387 464 571 1.7E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 SUPERFAMILY SSF55874 463 571 7.47E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 Gene3D G3DSA:3.30.565.10 424 572 1.3E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 Pfam PF06580 Histidine kinase 371 449 9.3E-24 T 25-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 569 1.9E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 PANTHER PTHR34220 77 575 3.1E-140 T 25-04-2016 APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 PANTHER PTHR34220 1 59 3.1E-140 T 25-04-2016 APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 PANTHER PTHR34220:SF3 77 575 3.1E-140 T 25-04-2016 APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 PANTHER PTHR34220:SF3 1 59 3.1E-140 T 25-04-2016 APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 Gene3D G3DSA:3.30.450.40 238 353 3.3E-4 T 25-04-2016 IPR029016 GAF domain-like APQ13_RS05095 205888f80c0508a0b25aaad952bda5f3 580 Pfam PF07694 5TMR of 5TMR-LYT 25 200 2.4E-43 T 25-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 300 312 - T 25-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 PANTHER PTHR11911:SF6 1 287 1.2E-244 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 PANTHER PTHR11911:SF6 305 491 1.2E-244 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 SUPERFAMILY SSF51412 7 94 4.97E-122 T 25-04-2016 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 SUPERFAMILY SSF51412 222 483 4.97E-122 T 25-04-2016 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 479 1.0E-159 T 25-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 SUPERFAMILY SSF54631 99 210 2.4E-29 T 25-04-2016 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 Gene3D G3DSA:3.20.20.70 9 491 3.4E-202 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 SMART SM00116 100 150 5.5E-8 T 25-04-2016 IPR000644 CBS domain APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 SMART SM00116 163 211 6.2E-9 T 25-04-2016 IPR000644 CBS domain APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 PIRSF PIRSF000130 3 493 1.8E-208 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 Pfam PF00571 CBS domain 100 146 3.6E-8 T 25-04-2016 IPR000644 CBS domain APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 Pfam PF00571 CBS domain 160 206 8.2E-7 T 25-04-2016 IPR000644 CBS domain APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 PANTHER PTHR11911 1 287 1.2E-244 T 25-04-2016 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 PANTHER PTHR11911 305 491 1.2E-244 T 25-04-2016 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 492 83.792 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 461 8.5E-194 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APQ13_RS07715 479ec5bb5926bc0e68ba620c80a12de8 493 SMART SM01240 11 479 0.0 T 25-04-2016 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Pfam PF05190 MutS family domain IV 415 506 2.6E-28 T 25-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Pfam PF01624 MutS domain I 8 118 7.5E-43 T 25-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Gene3D G3DSA:3.40.50.300 554 786 1.9E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 846 0.0 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Pfam PF05188 MutS domain II 126 239 1.9E-15 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 SUPERFAMILY SSF55271 4 114 6.67E-42 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Gene3D G3DSA:3.30.420.110 125 246 5.4E-30 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 SUPERFAMILY SSF53150 118 265 1.57E-30 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Gene3D G3DSA:1.10.1420.10 249 455 5.0E-54 T 25-04-2016 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 SUPERFAMILY SSF48334 255 552 4.05E-88 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Pfam PF00488 MutS domain V 598 784 5.5E-81 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 SMART SM00534 595 782 9.7E-113 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 SMART SM00533 270 578 1.7E-109 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Gene3D G3DSA:3.40.1170.10 3 118 2.7E-49 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 PANTHER PTHR11361:SF86 1 847 0.0 T 25-04-2016 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 PANTHER PTHR11361 1 847 0.0 T 25-04-2016 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 841 23.975 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 Pfam PF05192 MutS domain III 256 546 2.3E-43 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APQ13_RS08000 01a38d6678cdddc7372bb688a5b9b96e 849 SUPERFAMILY SSF52540 554 786 2.31E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05780 0aab3103874ef050686abfcc5c28d09f 285 Gene3D G3DSA:1.10.357.20 63 162 7.8E-4 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APQ13_RS05780 0aab3103874ef050686abfcc5c28d09f 285 Pfam PF01061 ABC-2 type transporter 2 220 1.6E-13 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APQ13_RS03360 fc5ca062741277a4eb16cb1eedab0cb4 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 1.0E-39 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03360 fc5ca062741277a4eb16cb1eedab0cb4 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03360 fc5ca062741277a4eb16cb1eedab0cb4 159 SUPERFAMILY SSF55083 1 158 3.27E-58 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03360 fc5ca062741277a4eb16cb1eedab0cb4 159 Gene3D G3DSA:3.30.70.560 4 156 1.4E-60 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03360 fc5ca062741277a4eb16cb1eedab0cb4 159 PANTHER PTHR20941 1 159 5.0E-74 T 25-04-2016 APQ13_RS03360 fc5ca062741277a4eb16cb1eedab0cb4 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 7.7E-48 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 SUPERFAMILY SSF50447 1 205 7.59E-79 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 Gene3D G3DSA:2.40.30.10 155 206 1.2E-14 T 25-04-2016 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 Gene3D G3DSA:2.40.30.10 4 33 1.2E-14 T 25-04-2016 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 25-04-2016 IPR019926 Ribosomal protein L3, conserved site APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 Gene3D G3DSA:4.10.960.10 82 154 8.4E-33 T 25-04-2016 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 1.2E-83 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 38.725 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 Pfam PF00297 Ribosomal protein L3 97 177 1.7E-15 T 25-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08400 f31a08f6ce75910dd728588c28544bef 208 PANTHER PTHR11229 1 208 1.4E-109 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 PANTHER PTHR22648:SF0 1 390 6.6E-143 T 25-04-2016 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Gene3D G3DSA:2.40.50.140 128 197 1.5E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Gene3D G3DSA:3.30.300.20 291 360 8.9E-33 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 SUPERFAMILY SSF54814 292 357 9.81E-17 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 391 27.638 T 25-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Gene3D G3DSA:3.30.300.20 198 289 2.5E-28 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 SUPERFAMILY SSF50249 132 198 6.36E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Gene3D G3DSA:3.30.1480.10 1 124 1.1E-41 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 SUPERFAMILY SSF54814 199 271 3.01E-22 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 SUPERFAMILY SSF69705 1 124 4.58E-37 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 SMART SM00322 229 306 1.7 T 25-04-2016 IPR004087 K Homology domain GO:0003676 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 SMART SM00322 315 393 0.05 T 25-04-2016 IPR004087 K Homology domain GO:0003676 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Pfam PF08529 NusA N-terminal domain 4 124 1.0E-32 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 PANTHER PTHR22648 1 390 6.6E-143 T 25-04-2016 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 356 1.3E-112 T 25-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APQ13_RS05840 0a0699fbb3a8c8c8e9493bcf96063084 397 Pfam PF13184 NusA-like KH domain 229 310 6.1E-29 T 25-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APQ13_RS05350 60965a0e19ea8044e5cf3bb594002857 182 PANTHER PTHR41319:SF1 2 179 1.9E-45 T 25-04-2016 APQ13_RS05350 60965a0e19ea8044e5cf3bb594002857 182 PIRSF PIRSF012565 1 182 1.7E-63 T 25-04-2016 IPR009370 Protein of unknown function DUF1027 APQ13_RS05350 60965a0e19ea8044e5cf3bb594002857 182 PANTHER PTHR41319 2 179 1.9E-45 T 25-04-2016 APQ13_RS05350 60965a0e19ea8044e5cf3bb594002857 182 Pfam PF06265 Protein of unknown function (DUF1027) 31 112 6.1E-33 T 25-04-2016 IPR009370 Protein of unknown function DUF1027 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 ProSitePatterns PS01176 Initiation factor 2 signature. 869 891 - T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PANTHER PTHR23115:SF184 403 738 9.4E-200 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PANTHER PTHR23115:SF184 771 914 9.4E-200 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Gene3D G3DSA:3.40.50.10050 718 797 2.0E-28 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PANTHER PTHR23115 771 914 9.4E-200 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PANTHER PTHR23115 403 738 9.4E-200 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Gene3D G3DSA:3.40.50.300 414 578 7.6E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 SUPERFAMILY SSF50447 593 673 1.94E-22 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 421 577 3.3E-35 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Pfam PF11987 Translation-initiation factor 2 704 808 1.5E-37 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Gene3D G3DSA:2.40.30.10 593 680 3.4E-21 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 SUPERFAMILY SSF52156 698 825 7.72E-40 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Gene3D G3DSA:2.40.30.10 820 916 6.2E-35 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 SUPERFAMILY SSF52540 410 591 8.7E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Pfam PF00009 Elongation factor Tu GTP binding domain 422 579 6.6E-34 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 SUPERFAMILY SSF50447 819 916 2.83E-28 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 338 389 3.6E-14 T 25-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 51 1.5E-14 T 25-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 916 16.904 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PRINTS PR00449 Transforming protein P21 ras signature 460 482 3.3E-5 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PRINTS PR00449 Transforming protein P21 ras signature 559 581 3.3E-5 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PRINTS PR00449 Transforming protein P21 ras signature 518 531 3.3E-5 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 PRINTS PR00449 Transforming protein P21 ras signature 421 442 3.3E-5 T 25-04-2016 APQ13_RS05825 2ff1ce738159fe3a67ea1b2bf796cc89 916 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 331 916 7.3E-247 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 284 296 - T 25-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 Gene3D G3DSA:3.90.230.10 126 352 1.3E-82 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 Pfam PF00557 Metallopeptidase family M24 134 337 4.7E-63 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 Gene3D G3DSA:3.40.350.10 1 125 1.6E-25 T 25-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 PANTHER PTHR10804:SF86 26 352 1.4E-95 T 25-04-2016 APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 SUPERFAMILY SSF53092 9 127 2.44E-24 T 25-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 PANTHER PTHR10804 26 352 1.4E-95 T 25-04-2016 APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 SUPERFAMILY SSF55920 94 348 7.59E-78 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS09165 bb416716ba9c043f04b5e715df805d4f 354 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 127 1.2E-20 T 25-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 SUPERFAMILY SSF63520 292 393 8.5E-14 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 PANTHER PTHR30185 5 484 2.5E-53 T 25-04-2016 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Gene3D G3DSA:1.10.1790.10 183 280 2.0E-9 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Gene3D G3DSA:1.10.1790.10 292 394 5.1E-15 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 SUPERFAMILY SSF63520 179 280 1.22E-10 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Pfam PF08279 HTH domain 9 52 3.7E-5 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Gene3D G3DSA:3.40.50.270 401 485 5.4E-6 T 25-04-2016 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Pfam PF00874 PRD domain 193 278 1.3E-4 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Pfam PF00874 PRD domain 314 391 2.3E-11 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 SUPERFAMILY SSF52794 400 482 4.29E-8 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 PANTHER PTHR30185:SF5 5 484 2.5E-53 T 25-04-2016 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 401 479 3.6E-5 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Gene3D G3DSA:1.10.10.10 6 67 2.3E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06480 48828289030fc16935e03c3abd6f9f34 491 Pfam PF05043 Mga helix-turn-helix domain 96 160 8.4E-9 T 25-04-2016 IPR007737 Mga helix-turn-helix domain APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 Gene3D G3DSA:1.10.1040.10 41 326 5.9E-109 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 SUPERFAMILY SSF51735 4 183 2.46E-70 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 PIRSF PIRSF000116 6 323 1.8E-48 T 25-04-2016 IPR014359 Ketol-acid reductoisomerase, bacteria GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 Gene3D G3DSA:3.50.50.60 9 40 6.5E-5 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 327 1.8E-130 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 178 9.5E-76 T 25-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 SUPERFAMILY SSF48179 184 331 9.18E-66 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 329 42.753 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 326 6.6E-60 T 25-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06715 a9b17b1edcc77b47fe865970752b6669 340 PANTHER PTHR21371 4 338 1.0E-177 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 SUPERFAMILY SSF46785 2 70 2.04E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 Pfam PF07702 UTRA domain 90 227 1.1E-30 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 SMART SM00866 88 227 4.2E-21 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 Gene3D G3DSA:3.40.1410.10 63 235 7.4E-45 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 7.6E-17 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 Gene3D G3DSA:1.10.10.10 2 62 5.9E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.1E-6 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.1E-6 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 PANTHER PTHR11751:SF347 121 140 1.5E-21 T 25-04-2016 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 PANTHER PTHR11751:SF347 1 73 1.5E-21 T 25-04-2016 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 SUPERFAMILY SSF64288 72 232 4.55E-36 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 3 234 1.5E-92 T 25-04-2016 IPR012770 Trehalose operon transcriptional repressor APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 SMART SM00345 7 66 9.9E-14 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 PANTHER PTHR11751 121 140 1.5E-21 T 25-04-2016 APQ13_RS08330 135c48a85613dcfa3ba2f9df2338a7ac 237 PANTHER PTHR11751 1 73 1.5E-21 T 25-04-2016 APQ13_RS02940 86138acab8b0d9f9f8a1d11d23c2218a 283 SUPERFAMILY SSF53474 40 272 1.22E-15 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS02940 86138acab8b0d9f9f8a1d11d23c2218a 283 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 33 283 5.6E-97 T 25-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like APQ13_RS02940 86138acab8b0d9f9f8a1d11d23c2218a 283 Gene3D G3DSA:3.40.50.1820 37 282 8.3E-92 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04750 0478faebceb4caa60338f7fed4a454c3 248 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 4 244 1.2E-57 T 25-04-2016 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family APQ13_RS06645 a2af05451919ca2035bc28c04af3ca33 420 PANTHER PTHR30508:SF0 1 418 4.7E-134 T 25-04-2016 APQ13_RS06645 a2af05451919ca2035bc28c04af3ca33 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 408 4.4E-79 T 25-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 APQ13_RS06645 a2af05451919ca2035bc28c04af3ca33 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 392 5.2E-57 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APQ13_RS06645 a2af05451919ca2035bc28c04af3ca33 420 PANTHER PTHR30508 1 418 4.7E-134 T 25-04-2016 APQ13_RS06645 a2af05451919ca2035bc28c04af3ca33 420 SUPERFAMILY SSF101960 5 418 1.83E-115 T 25-04-2016 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 Pfam PF00406 Adenylate kinase 5 186 1.5E-57 T 25-04-2016 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 TIGRFAM TIGR01351 adk: adenylate kinase 2 208 3.7E-74 T 25-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 SUPERFAMILY SSF52540 1 209 7.63E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 Hamap MF_00235 Adenylate kinase [adk]. 1 209 48.126 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 PANTHER PTHR23359 1 211 6.2E-88 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 PRINTS PR00094 Adenylate kinase signature 4 17 2.1E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 PRINTS PR00094 Adenylate kinase signature 32 46 2.1E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 PRINTS PR00094 Adenylate kinase signature 173 187 2.1E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 PRINTS PR00094 Adenylate kinase signature 82 98 2.1E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 PRINTS PR00094 Adenylate kinase signature 156 171 2.1E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 Gene3D G3DSA:3.40.50.300 1 207 1.3E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08505 7ff458052dd4cbff63a633ff43be0022 212 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APQ13_RS02760 23a2d09f6a9e12b2896f741cb099834e 417 Pfam PF01566 Natural resistance-associated macrophage protein 33 382 8.8E-8 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 PANTHER PTHR34382:SF3 1 103 4.2E-64 T 25-04-2016 APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 Gene3D G3DSA:1.20.58.80 2 102 9.9E-36 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 SUPERFAMILY SSF46973 1 102 2.48E-33 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 PANTHER PTHR34382 1 103 4.2E-64 T 25-04-2016 APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 1.6E-46 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 1.4E-33 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS01055 0da67d4cc36613e1fbd41aae87e5b421 104 PIRSF PIRSF000699 1 104 1.4E-38 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 SUPERFAMILY SSF50331 248 376 3.4E-27 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 Pfam PF03459 TOBE domain 311 366 3.5E-10 T 25-04-2016 IPR005116 Transport-associated OB, type 1 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 PANTHER PTHR24220 5 303 2.8E-163 T 25-04-2016 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 Gene3D G3DSA:2.40.50.100 251 297 1.2E-20 T 25-04-2016 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 Gene3D G3DSA:2.40.50.100 362 377 1.2E-20 T 25-04-2016 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 SMART SM00382 30 213 4.4E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 Gene3D G3DSA:2.40.50.140 298 360 1.3E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 Gene3D G3DSA:3.40.50.300 4 246 1.2E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 Pfam PF00005 ABC transporter 22 163 7.0E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 PANTHER PTHR24220:SF151 5 303 2.8E-163 T 25-04-2016 APQ13_RS03725 8fbdb5da2d1402daf2a839cabcbeb846 377 SUPERFAMILY SSF52540 4 256 1.87E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00501 AMP-binding enzyme 203 586 5.5E-70 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00501 AMP-binding enzyme 1230 1628 3.6E-89 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF56801 1203 1722 3.01E-126 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF52777 2022 2237 6.89E-22 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 PANTHER PTHR24095:SF137 147 1709 0.0 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF52777 989 1192 1.78E-32 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF56801 163 688 3.79E-110 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF52777 2454 2695 8.78E-36 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF47336 1735 1829 3.93E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00668 Condensation domain 2275 2570 7.8E-53 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00668 Condensation domain 785 1063 2.5E-45 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00668 Condensation domain 1818 2111 6.8E-33 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF47336 696 767 8.77E-12 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1366 1377 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 ProSitePatterns PS00455 Putative AMP-binding domain signature. 344 355 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF13745 HxxPF-repeated domain 1096 1176 6.5E-6 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:3.40.50.980 1373 1540 6.7E-44 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:3.40.50.980 351 499 2.4E-32 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:3.30.300.30 581 685 7.5E-23 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:3.30.300.30 1622 1721 2.4E-27 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 ProSitePatterns PS00012 Phosphopantetheine attachment site. 723 738 - T 25-04-2016 IPR006162 Phosphopantetheine attachment site APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF52777 788 949 7.45E-23 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00550 Phosphopantetheine attachment site 1739 1801 3.4E-9 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Pfam PF00550 Phosphopantetheine attachment site 702 762 1.4E-10 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:3.40.50.980 197 350 5.5E-38 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:3.40.50.980 1223 1372 2.8E-44 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 PANTHER PTHR24095 147 1709 0.0 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF52777 2276 2462 2.11E-29 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1253 1646 5.6E-118 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 224 603 1.7E-99 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:1.10.1200.10 693 768 1.9E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:1.10.1200.10 1734 1806 1.5E-15 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 SUPERFAMILY SSF52777 1815 1983 2.22E-20 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:2.30.38.10 500 574 3.9E-18 T 25-04-2016 APQ13_RS01675 d494b54a894670e735c0b063b4439249 2724 Gene3D G3DSA:2.30.38.10 1541 1617 7.2E-25 T 25-04-2016 APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 25-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 PANTHER PTHR23029 3 196 1.7E-52 T 25-04-2016 APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 SUPERFAMILY SSF53254 1 186 8.3E-47 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 PANTHER PTHR23029:SF38 3 196 1.7E-52 T 25-04-2016 APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 SMART SM00855 3 152 1.8E-21 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 188 1.7E-41 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS02790 6251719aebbc8323334d4cd61977ceae 197 Gene3D G3DSA:3.40.50.1240 1 186 2.9E-46 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 PANTHER PTHR21262 2 200 2.8E-117 T 25-04-2016 APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 SUPERFAMILY SSF81301 1 197 5.56E-59 T 25-04-2016 APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 PANTHER PTHR21262:SF11 2 200 2.8E-117 T 25-04-2016 APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 Pfam PF04607 Region found in RelA / SpoT proteins 42 161 1.3E-37 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 Gene3D G3DSA:1.10.287.860 146 200 2.8E-24 T 25-04-2016 APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 SMART SM00954 42 163 1.6E-44 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS03050 493a48bee2bf9a7453211c9e979acf2b 221 Gene3D G3DSA:3.30.460.10 2 143 1.5E-39 T 25-04-2016 APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 583 727 1.4E-33 T 25-04-2016 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 Pfam PF01368 DHH family 83 228 1.1E-13 T 25-04-2016 IPR001667 DDH domain APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 29 556 2.1E-179 T 25-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 PANTHER PTHR30255 2 728 3.6E-278 T 25-04-2016 APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 Pfam PF02272 DHHA1 domain 370 432 1.1E-12 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 PANTHER PTHR30255:SF2 2 728 3.6E-278 T 25-04-2016 APQ13_RS01145 b1911b9c33ddecd2f61188b27caed7c4 734 SUPERFAMILY SSF64182 58 438 6.67E-121 T 25-04-2016 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 SMART SM00740 630 690 0.03 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 SMART SM00740 691 749 1.8E-7 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 SUPERFAMILY SSF56519 70 264 3.27E-47 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 Gene3D G3DSA:3.90.1310.10 166 271 9.0E-33 T 25-04-2016 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 246 4.8E-27 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 Pfam PF00905 Penicillin binding protein transpeptidase domain 291 600 1.4E-70 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 Pfam PF03793 PASTA domain 693 748 5.9E-8 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 SUPERFAMILY SSF54184 693 748 2.22E-12 T 25-04-2016 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 SUPERFAMILY SSF56601 265 614 1.76E-77 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 PANTHER PTHR30627:SF1 10 651 3.4E-152 T 25-04-2016 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 Gene3D G3DSA:3.40.710.10 272 610 4.0E-73 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 PANTHER PTHR30627 10 651 3.4E-152 T 25-04-2016 APQ13_RS05695 055bebb65ca7abfee195eb6725c6c8eb 749 SUPERFAMILY SSF54184 630 689 1.24E-15 T 25-04-2016 APQ13_RS05555 42d09d93f5cd0af4b13a1174e9a9f96a 231 PIRSF PIRSF031509 1 231 8.0E-89 T 25-04-2016 IPR016975 Cell wall-active antibiotic response protein GO:0016021 APQ13_RS05555 42d09d93f5cd0af4b13a1174e9a9f96a 231 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 115 228 3.7E-30 T 25-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF APQ13_RS09540 093bd303214f90f29447c95e1f993dda 271 SUPERFAMILY SSF140931 81 247 4.45E-22 T 25-04-2016 IPR003812 Fido domain APQ13_RS09540 093bd303214f90f29447c95e1f993dda 271 PANTHER PTHR39560 32 271 2.3E-49 T 25-04-2016 APQ13_RS09540 093bd303214f90f29447c95e1f993dda 271 Gene3D G3DSA:1.10.3290.10 71 248 5.4E-27 T 25-04-2016 IPR003812 Fido domain APQ13_RS09540 093bd303214f90f29447c95e1f993dda 271 Pfam PF02661 Fic/DOC family 92 200 8.5E-11 T 25-04-2016 IPR003812 Fido domain APQ13_RS09540 093bd303214f90f29447c95e1f993dda 271 PANTHER PTHR39560:SF1 32 271 2.3E-49 T 25-04-2016 APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 Pfam PF00005 ABC transporter 20 162 2.3E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 Gene3D G3DSA:3.40.50.300 2 232 7.3E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 PANTHER PTHR24220 6 251 4.6E-87 T 25-04-2016 APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 SMART SM00382 29 209 3.6E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 PANTHER PTHR24220:SF523 6 251 4.6E-87 T 25-04-2016 APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 SUPERFAMILY SSF52540 3 232 4.26E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03105 74cd1918d982fcde99e7e53b8142c205 303 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 Pfam PF12840 Helix-turn-helix domain 16 74 6.7E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.7E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 1.7E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 1.7E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 PANTHER PTHR33154:SF12 1 96 5.2E-31 T 25-04-2016 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 PANTHER PTHR33154 1 96 5.2E-31 T 25-04-2016 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 SMART SM00418 16 94 1.9E-11 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 Gene3D G3DSA:1.10.10.10 8 96 3.0E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02180 6ceb22f5045d3df6ab5757ce29b8957b 100 SUPERFAMILY SSF46785 4 93 8.3E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 SMART SM00388 195 257 8.2E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 SUPERFAMILY SSF55874 262 406 2.62E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 400 6.2E-10 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 PANTHER PTHR24423 193 398 3.3E-30 T 25-04-2016 APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 Gene3D G3DSA:3.30.565.10 244 407 2.5E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 Gene3D G3DSA:1.10.287.130 192 243 1.1E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 256 1.7E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 SUPERFAMILY SSF47384 187 256 2.16E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03550 59dd63444e8fa8a7e15ebfd30fcc0c6e 410 SMART SM00387 301 410 3.5E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Gene3D G3DSA:3.40.50.800 537 642 9.2E-37 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 SUPERFAMILY SSF55186 63 240 1.57E-64 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Gene3D G3DSA:3.30.54.20 131 186 1.4E-22 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PANTHER PTHR11451 1 644 6.8E-304 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 641 34.512 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Gene3D G3DSA:3.10.20.30 1 64 9.9E-24 T 25-04-2016 IPR012675 Beta-grasp domain APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 3.2E-16 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 SUPERFAMILY SSF52954 533 638 7.85E-34 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Gene3D G3DSA:3.30.980.10 66 130 7.3E-38 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Gene3D G3DSA:3.30.980.10 187 222 7.3E-38 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 637 4.6E-228 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 SMART SM00863 169 218 2.9E-24 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Pfam PF03129 Anticodon binding domain 547 635 7.0E-25 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 SUPERFAMILY SSF55681 242 532 7.57E-96 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PANTHER PTHR11451:SF5 1 644 6.8E-304 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Pfam PF02824 TGS domain 2 61 8.9E-11 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 4.4E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 4.4E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 4.4E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 4.4E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 4.4E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 534 1.4E-32 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 Gene3D G3DSA:3.30.930.10 241 536 4.0E-104 T 25-04-2016 APQ13_RS00660 0baa6e87809fb00a15aaac829a656134 649 SUPERFAMILY SSF81271 2 61 6.32E-16 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 Pfam PF13365 Trypsin-like peptidase domain 108 253 3.3E-29 T 25-04-2016 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 SUPERFAMILY SSF50494 60 290 1.14E-54 T 25-04-2016 IPR009003 Peptidase S1, PA clan APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 Gene3D G3DSA:2.40.10.10 106 182 1.7E-25 T 25-04-2016 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PANTHER PTHR22939 58 393 2.0E-96 T 25-04-2016 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 Gene3D G3DSA:2.30.42.10 301 398 7.8E-20 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 SMART SM00228 298 384 9.5E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 7.3E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PRINTS PR00834 HtrA/DegQ protease family signature 342 354 7.3E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 7.3E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 7.3E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 7.3E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 7.3E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 PANTHER PTHR22939:SF79 58 393 2.0E-96 T 25-04-2016 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 SUPERFAMILY SSF50156 326 397 5.26E-16 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 Pfam PF13180 PDZ domain 298 393 2.5E-20 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS07670 52ae9eb4e1ae80c199ad353102114752 402 Gene3D G3DSA:2.40.10.10 183 300 9.3E-42 T 25-04-2016 APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 93 7.5E-7 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 Gene3D G3DSA:3.40.1280.10 104 245 7.6E-44 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 Pfam PF00588 SpoU rRNA Methylase family 104 242 4.2E-35 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 PANTHER PTHR12029 1 245 1.5E-54 T 25-04-2016 APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 SUPERFAMILY SSF55315 3 92 7.18E-17 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 SUPERFAMILY SSF75217 85 245 7.19E-39 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 Gene3D G3DSA:3.30.1330.30 3 92 1.1E-18 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS00025 f7d5544cd3e145ff661c0d5dd1a72c98 246 SMART SM00967 29 95 6.9E-12 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 PIRSF PIRSF006230 1 278 8.9E-98 T 25-04-2016 IPR016478 GTPase, MTG1 APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 SUPERFAMILY SSF52540 10 192 1.63E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 Gene3D G3DSA:3.40.50.300 16 178 2.5E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 170 185 8.5E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 124 144 8.5E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 PANTHER PTHR11089 3 274 1.1E-68 T 25-04-2016 APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 Gene3D G3DSA:1.10.1580.10 181 268 2.6E-24 T 25-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 274 2.4E-107 T 25-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis APQ13_RS03260 71f8cecc747fc73d4f5ee48c186f6b7c 283 Pfam PF01926 50S ribosome-binding GTPase 124 193 1.6E-16 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 9 235 31.846 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 PANTHER PTHR11228 8 228 9.8E-40 T 25-04-2016 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 Gene3D G3DSA:3.20.20.70 24 125 1.3E-13 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 PIRSF PIRSF000370 7 238 1.7E-47 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 PANTHER PTHR11228:SF6 8 228 9.8E-40 T 25-04-2016 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 Pfam PF04055 Radical SAM superfamily 33 129 2.9E-11 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 SUPERFAMILY SSF102114 30 127 5.49E-12 T 25-04-2016 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 Pfam PF13353 4Fe-4S single cluster domain 20 123 9.1E-11 T 25-04-2016 APQ13_RS03600 6a38c62aacb63364548708b80214c549 238 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 238 6.3E-99 T 25-04-2016 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 197 324 1.5E-14 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 PIRSF PIRSF006809 2 415 1.2E-139 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 SUPERFAMILY SSF52540 199 369 9.78E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 Hamap MF_00900 GTPase HflX [hflX]. 28 384 42.551 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 4.1E-8 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 4.1E-8 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 Gene3D G3DSA:3.40.50.300 198 356 2.8E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 Pfam PF01926 50S ribosome-binding GTPase 200 319 1.0E-18 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.8E-29 T 25-04-2016 IPR032305 GTP-binding protein, middle domain APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 PANTHER PTHR10229 1 399 6.8E-144 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 Pfam PF13167 GTP-binding GTPase N-terminal 27 113 5.5E-30 T 25-04-2016 IPR025121 GTPase HflX, N-terminal APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 354 5.9E-137 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 APQ13_RS01125 a45623124d35e76610ae3654139cf815 415 PANTHER PTHR10229:SF0 1 399 6.8E-144 T 25-04-2016 APQ13_RS00365 2ccc1e3f7ea02597990369d0300c7ef5 117 Pfam PF03960 ArsC family 22 109 1.8E-13 T 25-04-2016 IPR006660 Arsenate reductase-like APQ13_RS00365 2ccc1e3f7ea02597990369d0300c7ef5 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 110 3.2E-31 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APQ13_RS00365 2ccc1e3f7ea02597990369d0300c7ef5 117 Gene3D G3DSA:3.40.30.10 1 111 2.2E-38 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS00365 2ccc1e3f7ea02597990369d0300c7ef5 117 PANTHER PTHR30041:SF3 1 109 7.8E-35 T 25-04-2016 APQ13_RS00365 2ccc1e3f7ea02597990369d0300c7ef5 117 PANTHER PTHR30041 1 109 7.8E-35 T 25-04-2016 APQ13_RS00365 2ccc1e3f7ea02597990369d0300c7ef5 117 SUPERFAMILY SSF52833 1 110 5.26E-31 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS05150 23f726fa77a5c187a97077138a2ac59f 76 SUPERFAMILY SSF143567 3 76 2.62E-24 T 25-04-2016 APQ13_RS05150 23f726fa77a5c187a97077138a2ac59f 76 Pfam PF08796 Protein of unknown function (DUF1797) 8 75 7.2E-24 T 25-04-2016 IPR014904 Protein of unknown function DUF1797 APQ13_RS05150 23f726fa77a5c187a97077138a2ac59f 76 PIRSF PIRSF037356 1 76 3.7E-30 T 25-04-2016 IPR014904 Protein of unknown function DUF1797 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Pfam PF06827 Zinc finger found in FPG and IleRS 885 912 1.0E-5 T 25-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 2.0E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 2.0E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 2.0E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 520 533 2.0E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 392 407 2.0E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PANTHER PTHR11946:SF11 885 917 0.0 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PANTHER PTHR11946:SF11 5 249 0.0 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PANTHER PTHR11946:SF11 274 866 0.0 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PANTHER PTHR11946 885 917 0.0 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PANTHER PTHR11946 5 249 0.0 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 PANTHER PTHR11946 274 866 0.0 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Gene3D G3DSA:3.90.740.10 205 382 2.1E-44 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Pfam PF08264 Anticodon-binding domain of tRNA 678 831 7.6E-27 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 SUPERFAMILY SSF52374 1 200 3.22E-150 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 SUPERFAMILY SSF52374 394 640 3.22E-150 T 25-04-2016 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 19.418 T 25-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Gene3D G3DSA:3.40.50.620 394 632 1.6E-142 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Gene3D G3DSA:3.40.50.620 16 203 1.6E-142 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 SUPERFAMILY SSF50677 202 394 2.09E-42 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 834 1.7E-280 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Gene3D G3DSA:1.10.730.10 634 818 2.6E-43 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 26 634 5.7E-203 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS05180 81bf70d53462acb1fd294d718a767c09 930 SUPERFAMILY SSF47323 645 916 1.01E-72 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS05490 814106792367434fef47ccb86f6f0154 221 PANTHER PTHR11907 24 221 1.0E-40 T 25-04-2016 APQ13_RS05490 814106792367434fef47ccb86f6f0154 221 PANTHER PTHR11907:SF9 24 221 1.0E-40 T 25-04-2016 APQ13_RS05490 814106792367434fef47ccb86f6f0154 221 SUPERFAMILY SSF53271 48 220 8.38E-21 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS05490 814106792367434fef47ccb86f6f0154 221 Gene3D G3DSA:3.40.50.2020 51 221 2.4E-17 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS08105 dfbaee3add03816a7267a0d3eb880631 264 PANTHER PTHR11040:SF56 7 257 6.5E-87 T 25-04-2016 APQ13_RS08105 dfbaee3add03816a7267a0d3eb880631 264 PANTHER PTHR11040 7 257 6.5E-87 T 25-04-2016 APQ13_RS08105 dfbaee3add03816a7267a0d3eb880631 264 Hamap MF_00548 Zinc transporter ZupT [zupT]. 5 264 36.834 T 25-04-2016 IPR023498 Zinc transporter ZupT APQ13_RS08105 dfbaee3add03816a7267a0d3eb880631 264 Pfam PF02535 ZIP Zinc transporter 101 258 1.1E-31 T 25-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 1.6E-58 T 25-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 PIRSF PIRSF002131 2 127 4.1E-52 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 Gene3D G3DSA:3.30.420.80 5 127 2.5E-56 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 PANTHER PTHR11759 8 127 2.4E-71 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 25-04-2016 IPR018102 Ribosomal S11, conserved site APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 33.558 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 Pfam PF00411 Ribosomal protein S11 17 126 1.8E-51 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08525 bdcfd32eb90b93b0f5dfa8758d48672a 127 SUPERFAMILY SSF53137 12 127 2.57E-49 T 25-04-2016 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 Gene3D G3DSA:3.30.1140.32 107 206 6.6E-44 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 7.8E-40 T 25-04-2016 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 SUPERFAMILY SSF54814 2 105 8.11E-38 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.238 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 SMART SM00322 59 124 9.0E-10 T 25-04-2016 IPR004087 K Homology domain GO:0003676 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 25-04-2016 IPR018280 Ribosomal protein S3, conserved site APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 PANTHER PTHR11760 2 214 1.1E-133 T 25-04-2016 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 PANTHER PTHR11760:SF19 2 214 1.1E-133 T 25-04-2016 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 Gene3D G3DSA:3.30.300.20 17 106 3.5E-34 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 SUPERFAMILY SSF54821 106 205 1.11E-37 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 6.5E-93 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APQ13_RS08430 eb0a494d90f09afa109a0c4bc0f3b29d 217 Pfam PF07650 KH domain 38 109 1.5E-20 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 PANTHER PTHR34185:SF1 1 284 6.1E-96 T 25-04-2016 APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 PIRSF PIRSF004793 14 278 2.2E-81 T 25-04-2016 IPR014046 Diadenylate cyclase-like APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 21 265 3.1E-80 T 25-04-2016 IPR014046 Diadenylate cyclase-like APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 PANTHER PTHR34185 1 284 6.1E-96 T 25-04-2016 APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 128 245 2.0E-40 T 25-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 SUPERFAMILY SSF143597 51 249 1.7E-63 T 25-04-2016 APQ13_RS01335 bbcd8e3194064f15d35b3c62a4d6223b 284 Gene3D G3DSA:3.40.1700.10 121 250 1.1E-50 T 25-04-2016 APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 199 33.419 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 PANTHER PTHR21235 2 198 1.2E-77 T 25-04-2016 APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 Gene3D G3DSA:3.40.50.880 1 200 8.1E-69 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 Pfam PF00117 Glutamine amidotransferase class-I 4 188 1.9E-22 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 198 2.0E-62 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 PIRSF PIRSF000495 1 201 2.2E-67 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 SUPERFAMILY SSF52317 2 199 3.34E-50 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS02005 fcb974ba5a0621dd0d3065583bbaf364 201 PANTHER PTHR21235:SF1 2 198 1.2E-77 T 25-04-2016 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 SUPERFAMILY SSF81324 19 227 3.14E-38 T 25-04-2016 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 Gene3D G3DSA:1.10.287.70 25 225 4.1E-39 T 25-04-2016 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 Pfam PF00520 Ion transport protein 22 227 1.7E-23 T 25-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 PANTHER PTHR11537:SF137 1 234 5.3E-28 T 25-04-2016 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 PRINTS PR00169 Potassium channel signature 114 140 7.8E-22 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 PRINTS PR00169 Potassium channel signature 13 41 7.8E-22 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 PRINTS PR00169 Potassium channel signature 170 192 7.8E-22 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 PRINTS PR00169 Potassium channel signature 199 225 7.8E-22 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APQ13_RS09175 5371acda4c7542fed0a5d2f8df947916 234 PANTHER PTHR11537 1 234 5.3E-28 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 PRINTS PR00332 Histidine triad family signature 5 21 5.2E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 PRINTS PR00332 Histidine triad family signature 93 103 5.2E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 PRINTS PR00332 Histidine triad family signature 26 44 5.2E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 PANTHER PTHR23089:SF14 1 120 1.8E-65 T 25-04-2016 APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 PANTHER PTHR23089 1 120 1.8E-65 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 Gene3D G3DSA:3.30.428.10 3 134 2.2E-42 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 SUPERFAMILY SSF54197 1 133 2.32E-41 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 APQ13_RS05875 f31c1ea06754eecdb27cca33d8775f07 139 Pfam PF01230 HIT domain 13 106 5.0E-27 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 163 1.3E-52 T 25-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 Gene3D G3DSA:3.40.50.720 3 186 3.2E-61 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PANTHER PTHR11728 1 337 2.2E-131 T 25-04-2016 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PIRSF PIRSF000114 1 335 4.2E-102 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 SUPERFAMILY SSF48179 183 334 1.17E-52 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.2E-41 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 2.2E-41 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.2E-41 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.2E-41 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.2E-41 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 2.2E-41 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 323 1.2E-49 T 25-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 Gene3D G3DSA:1.10.1040.10 187 329 2.1E-55 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 325 35.736 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APQ13_RS06290 d38fc693dc8486da4dab24a91e0663d1 339 SUPERFAMILY SSF51735 5 181 1.09E-56 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 Pfam PF13649 Methyltransferase domain 39 133 2.0E-17 T 25-04-2016 APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 Gene3D G3DSA:3.40.50.150 2 244 1.5E-43 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 PANTHER PTHR10108:SF872 191 246 1.7E-52 T 25-04-2016 APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 PANTHER PTHR10108:SF872 4 165 1.7E-52 T 25-04-2016 APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 SUPERFAMILY SSF53335 3 245 2.22E-51 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 PANTHER PTHR10108 191 246 1.7E-52 T 25-04-2016 APQ13_RS09360 beaee8132609e50912f72d750da7a4ed 247 PANTHER PTHR10108 4 165 1.7E-52 T 25-04-2016 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 Gene3D G3DSA:1.10.8.10 1 84 3.8E-10 T 25-04-2016 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 SUPERFAMILY SSF53335 5 253 3.38E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 PANTHER PTHR18895:SF64 35 274 1.4E-82 T 25-04-2016 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 19 273 2.5E-68 T 25-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 272 1.0E-84 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 276 39.742 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 Pfam PF05175 Methyltransferase small domain 101 199 2.8E-20 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 Gene3D G3DSA:3.40.50.150 86 274 2.7E-63 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02875 1860df0b9881c7092b029486e4ca47b7 277 PANTHER PTHR18895 35 274 1.4E-82 T 25-04-2016 APQ13_RS08755 f98602ba76498005191308ffdcf09a77 278 PANTHER PTHR32502 29 272 2.6E-40 T 25-04-2016 APQ13_RS08755 f98602ba76498005191308ffdcf09a77 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 272 4.7E-93 T 25-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APQ13_RS08755 f98602ba76498005191308ffdcf09a77 278 PANTHER PTHR32502:SF5 29 272 2.6E-40 T 25-04-2016 APQ13_RS09620 7947f791fe7644aa2943a881a29d13da 263 PANTHER PTHR11941:SF76 2 260 7.3E-93 T 25-04-2016 APQ13_RS09620 7947f791fe7644aa2943a881a29d13da 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 263 6.2E-49 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APQ13_RS09620 7947f791fe7644aa2943a881a29d13da 263 PANTHER PTHR11941 2 260 7.3E-93 T 25-04-2016 APQ13_RS09620 7947f791fe7644aa2943a881a29d13da 263 Gene3D G3DSA:3.90.226.10 1 261 1.2E-70 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS09620 7947f791fe7644aa2943a881a29d13da 263 SUPERFAMILY SSF52096 1 262 2.49E-70 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 265 282 2.0E-23 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 67 81 2.0E-23 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 163 175 2.0E-23 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 213 229 2.0E-23 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 96 106 2.0E-23 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 SUPERFAMILY SSF53335 3 281 1.79E-62 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 86 281 1.6E-47 T 25-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PANTHER PTHR22807:SF36 1 332 7.9E-113 T 25-04-2016 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 81 1.2E-14 T 25-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 308 369 7.9E-22 T 25-04-2016 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 Gene3D G3DSA:3.40.50.150 79 281 4.3E-59 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 PANTHER PTHR22807 1 332 7.9E-113 T 25-04-2016 APQ13_RS02620 f7fba8466c9cfe547389bb18a5df655b 434 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 387 434 7.6E-14 T 25-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 PANTHER PTHR22572 6 376 6.1E-110 T 25-04-2016 APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 Pfam PF00483 Nucleotidyl transferase 22 256 1.7E-11 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 5 370 1.0E-130 T 25-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 Gene3D G3DSA:3.90.550.10 303 346 1.5E-38 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 Gene3D G3DSA:3.90.550.10 20 270 1.5E-38 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 SUPERFAMILY SSF53448 22 259 1.55E-35 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 SUPERFAMILY SSF53448 320 336 1.55E-35 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 SUPERFAMILY SSF51161 290 356 1.24E-12 T 25-04-2016 IPR011004 Trimeric LpxA-like APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 PANTHER PTHR22572:SF9 6 376 6.1E-110 T 25-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 APQ13_RS00875 d78736cee1f7e974199af13dee6cc04b 377 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 324 357 1.2E-4 T 25-04-2016 IPR001451 Hexapeptide repeat APQ13_RS07910 790957b14584abbe8c641819106b2a62 130 SUPERFAMILY SSF52343 22 126 8.16E-5 T 25-04-2016 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 Gene3D G3DSA:3.30.1490.10 76 132 7.6E-30 T 25-04-2016 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.876 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 Gene3D G3DSA:3.30.1370.30 2 73 5.0E-30 T 25-04-2016 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 Pfam PF00410 Ribosomal protein S8 5 132 1.1E-52 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 PANTHER PTHR11758 1 132 5.7E-67 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08470 8191178191a394497b7c21d3f8d8f125 132 SUPERFAMILY SSF56047 2 132 2.62E-49 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 Gene3D G3DSA:3.40.50.150 43 186 2.6E-10 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 PANTHER PTHR23417:SF14 1 210 4.4E-65 T 25-04-2016 APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 27 208 8.2E-55 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 PANTHER PTHR23417 1 210 4.4E-65 T 25-04-2016 APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 Pfam PF02390 Putative methyltransferase 39 206 1.3E-45 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 SUPERFAMILY SSF53335 8 207 1.52E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05855 6825c9a099e727a4a55815195f28e558 211 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 211 28.078 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 515 532 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 579 595 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 40 55 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 535 547 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 275 288 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 75 88 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 117 131 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 431 445 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR00418 DNA topoisomerase II family signature 497 513 9.3E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 SMART SM00433 40 640 0.0 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Pfam PF00204 DNA gyrase B 229 399 2.8E-57 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 383 403 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 202 215 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 187 202 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 600 612 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 11 21 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 616 632 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 249 267 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 319 335 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 369 383 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PRINTS PR01159 DNA gyrase subunit B signature 481 490 8.5E-52 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Gene3D G3DSA:3.30.230.10 228 399 6.7E-64 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 SUPERFAMILY SSF56719 405 646 3.92E-86 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 179 5.3E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Pfam PF01751 Toprim domain 430 540 3.1E-18 T 25-04-2016 IPR006171 Toprim domain APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 SMART SM00387 36 182 3.1E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Gene3D G3DSA:3.40.50.670 416 628 3.3E-86 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Gene3D G3DSA:3.30.565.10 11 223 4.8E-87 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 648 0.0 T 25-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PANTHER PTHR10169:SF44 9 639 0.0 T 25-04-2016 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 PANTHER PTHR10169 9 639 0.0 T 25-04-2016 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 SUPERFAMILY SSF54211 229 399 1.29E-53 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 9 645 50.081 T 25-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 SUPERFAMILY SSF55874 10 222 1.06E-67 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02310 f39930365a056e4b4e06408fe54ebac6 649 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 576 636 4.0E-28 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS04115 01b9360cff6a6e70607efa769760a953 120 SUPERFAMILY SSF54637 4 119 3.92E-33 T 25-04-2016 IPR029069 HotDog domain APQ13_RS04115 01b9360cff6a6e70607efa769760a953 120 PIRSF PIRSF014972 3 120 3.4E-29 T 25-04-2016 IPR025540 Fluoroacetyl-CoA thioesterase APQ13_RS04115 01b9360cff6a6e70607efa769760a953 120 PANTHER PTHR36934 13 120 9.0E-21 T 25-04-2016 APQ13_RS04115 01b9360cff6a6e70607efa769760a953 120 Gene3D G3DSA:3.10.129.10 6 120 6.2E-34 T 25-04-2016 IPR029069 HotDog domain APQ13_RS08115 59e276cb20f7f6e4c1a28bc266eb4c29 974 PANTHER PTHR38454:SF1 8 462 3.3E-42 T 25-04-2016 APQ13_RS08115 59e276cb20f7f6e4c1a28bc266eb4c29 974 PANTHER PTHR38454:SF1 511 971 3.3E-42 T 25-04-2016 APQ13_RS08115 59e276cb20f7f6e4c1a28bc266eb4c29 974 Pfam PF09586 Bacterial membrane protein YfhO 26 950 1.4E-287 T 25-04-2016 IPR018580 Uncharacterised protein family YfhO APQ13_RS08115 59e276cb20f7f6e4c1a28bc266eb4c29 974 PANTHER PTHR38454 8 462 3.3E-42 T 25-04-2016 APQ13_RS08115 59e276cb20f7f6e4c1a28bc266eb4c29 974 PANTHER PTHR38454 511 971 3.3E-42 T 25-04-2016 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 PIRSF PIRSF001332 1 238 1.4E-95 T 25-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 Gene3D G3DSA:3.30.1330.80 2 106 2.3E-39 T 25-04-2016 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 Gene3D G3DSA:3.30.1330.80 107 204 8.6E-48 T 25-04-2016 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 PANTHER PTHR35524 1 238 7.8E-79 T 25-04-2016 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 4 238 1.5E-90 T 25-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 SUPERFAMILY SSF117856 4 238 6.63E-77 T 25-04-2016 APQ13_RS01240 cc2444df259b6413b7b6470ad2890932 238 Pfam PF03306 Alpha-acetolactate decarboxylase 6 226 2.5E-76 T 25-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 SUPERFAMILY SSF55729 35 116 4.77E-8 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 SMART SM00764 148 328 2.3E-121 T 25-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 PIRSF PIRSF005751 1 346 1.5E-132 T 25-04-2016 IPR005216 Citrate lyase ligase GO:0008771 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 Pfam PF00583 Acetyltransferase (GNAT) family 59 111 2.0E-4 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 SUPERFAMILY SSF52374 243 329 9.93E-17 T 25-04-2016 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 SUPERFAMILY SSF52374 154 213 9.93E-17 T 25-04-2016 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 PANTHER PTHR40599 1 349 5.4E-163 T 25-04-2016 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 PANTHER PTHR40599:SF1 1 349 5.4E-163 T 25-04-2016 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 112 327 5.0E-123 T 25-04-2016 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 151 185 3.9E-7 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 Gene3D G3DSA:3.40.50.620 131 329 2.2E-25 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 12 328 4.0E-91 T 25-04-2016 IPR005216 Citrate lyase ligase GO:0008771 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 Pfam PF08218 Citrate lyase ligase C-terminal domain 149 328 8.9E-79 T 25-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 APQ13_RS03175 d25f345c850c22f62100918b6bd96220 349 Gene3D G3DSA:3.40.630.30 60 116 1.2E-7 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 547 687 4.1E-28 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Gene3D G3DSA:1.10.10.10 2 64 3.2E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 SUPERFAMILY SSF55804 542 687 6.41E-34 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Gene3D G3DSA:3.40.930.10 542 690 1.5E-48 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 PANTHER PTHR30185:SF5 543 691 2.6E-87 T 25-04-2016 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 PANTHER PTHR30185:SF5 1 505 2.6E-87 T 25-04-2016 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Pfam PF00874 PRD domain 300 388 8.1E-18 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 SUPERFAMILY SSF52794 402 472 2.04E-5 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 SUPERFAMILY SSF63520 292 389 1.96E-17 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 PANTHER PTHR30185 543 691 2.6E-87 T 25-04-2016 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 PANTHER PTHR30185 1 505 2.6E-87 T 25-04-2016 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Pfam PF05043 Mga helix-turn-helix domain 97 165 4.0E-6 T 25-04-2016 IPR007737 Mga helix-turn-helix domain APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Gene3D G3DSA:1.10.1790.10 297 390 1.1E-16 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS05430 ff06100cfbea52a63974135cd029ebb8 693 Pfam PF08279 HTH domain 8 61 1.4E-5 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS00060 7a16b915fc3065d6d1549f43a78c837f 172 PANTHER PTHR11124:SF14 1 159 7.6E-43 T 25-04-2016 APQ13_RS00060 7a16b915fc3065d6d1549f43a78c837f 172 SUPERFAMILY SSF56300 5 169 3.11E-42 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS00060 7a16b915fc3065d6d1549f43a78c837f 172 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 6 140 6.7E-22 T 25-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APQ13_RS00060 7a16b915fc3065d6d1549f43a78c837f 172 Gene3D G3DSA:3.60.21.10 5 163 2.5E-38 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS00060 7a16b915fc3065d6d1549f43a78c837f 172 PANTHER PTHR11124 1 159 7.6E-43 T 25-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APQ13_RS00060 7a16b915fc3065d6d1549f43a78c837f 172 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 6 148 1.5E-18 T 25-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 Pfam PF03054 tRNA methyl transferase 8 360 4.3E-147 T 25-04-2016 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 PANTHER PTHR11933 1 373 2.4E-208 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 PANTHER PTHR11933:SF10 1 373 2.4E-208 T 25-04-2016 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 SUPERFAMILY SSF52402 5 244 1.01E-58 T 25-04-2016 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 Gene3D G3DSA:2.40.30.10 283 371 5.2E-33 T 25-04-2016 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 361 41.216 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 Gene3D G3DSA:2.30.30.280 214 281 2.3E-31 T 25-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 360 4.0E-137 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APQ13_RS07775 e2912f76a6899794cc6863e3c2a82e00 373 Gene3D G3DSA:3.40.50.620 4 212 1.1E-104 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Pfam PF03144 Elongation factor Tu domain 2 224 294 5.5E-13 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Gene3D G3DSA:2.40.30.10 211 308 1.6E-26 T 25-04-2016 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 604 1.9E-290 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Pfam PF00009 Elongation factor Tu GTP binding domain 7 200 6.9E-55 T 25-04-2016 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 SMART SM00838 403 485 1.7E-6 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Gene3D G3DSA:3.30.70.240 405 482 2.9E-33 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 SUPERFAMILY SSF54980 307 392 9.71E-15 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 SUPERFAMILY SSF52540 3 211 6.63E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PANTHER PTHR23115:SF14 189 596 5.1E-292 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PANTHER PTHR23115:SF14 1 173 5.1E-292 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Pfam PF00679 Elongation factor G C-terminus 401 480 1.8E-24 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 7.0E-24 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PANTHER PTHR23115 189 596 5.1E-292 T 25-04-2016 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PANTHER PTHR23115 1 173 5.1E-292 T 25-04-2016 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Gene3D G3DSA:3.40.50.300 3 210 2.0E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 SUPERFAMILY SSF54980 403 518 2.54E-29 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Gene3D G3DSA:3.30.70.870 309 404 1.0E-37 T 25-04-2016 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 Gene3D G3DSA:2.40.50.250 488 582 3.5E-39 T 25-04-2016 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 SUPERFAMILY SSF50447 155 304 2.91E-31 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS05240 3707a8324280bd2360b905ff790126a3 614 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS05725 e578b808f2b364158da6a87eb116a89d 84 PANTHER PTHR37300:SF1 1 78 3.7E-34 T 25-04-2016 APQ13_RS05725 e578b808f2b364158da6a87eb116a89d 84 PANTHER PTHR37300 1 78 3.7E-34 T 25-04-2016 APQ13_RS05725 e578b808f2b364158da6a87eb116a89d 84 Gene3D G3DSA:1.10.287.540 1 59 1.1E-25 T 25-04-2016 IPR023218 UPF0291 structural domain APQ13_RS05725 e578b808f2b364158da6a87eb116a89d 84 SUPERFAMILY SSF158221 2 41 8.37E-13 T 25-04-2016 APQ13_RS05725 e578b808f2b364158da6a87eb116a89d 84 Hamap MF_01103 UPF0291 protein . 1 59 16.234 T 25-04-2016 IPR009242 Protein of unknown function DUF896 APQ13_RS05725 e578b808f2b364158da6a87eb116a89d 84 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 67 1.9E-28 T 25-04-2016 IPR009242 Protein of unknown function DUF896 APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 3.23E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.23E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.23E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.58E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.58E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.58E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.58E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.58E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.58E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PANTHER PTHR24322 7 133 8.8E-69 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PANTHER PTHR24322 149 181 8.8E-69 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PANTHER PTHR24322:SF392 7 133 8.8E-69 T 25-04-2016 APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 PANTHER PTHR24322:SF392 149 181 8.8E-69 T 25-04-2016 APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 SUPERFAMILY SSF51735 4 232 2.24E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 Gene3D G3DSA:3.40.50.720 3 230 3.4E-59 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APQ13_RS03080 4d88f5f177bea1357c4edf5254dae706 251 Pfam PF00106 short chain dehydrogenase 4 187 4.3E-52 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 PANTHER PTHR11601 6 406 2.1E-201 T 25-04-2016 APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 Gene3D G3DSA:3.40.640.10 36 282 6.3E-87 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 PANTHER PTHR11601:SF17 6 406 2.1E-201 T 25-04-2016 APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 Gene3D G3DSA:3.90.1150.10 283 398 4.3E-29 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 SUPERFAMILY SSF53383 4 401 7.85E-128 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 3.8E-182 T 25-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APQ13_RS06640 280822f412350f184bb87e13e411acd4 409 Pfam PF00266 Aminotransferase class-V 25 394 7.7E-152 T 25-04-2016 IPR000192 Aminotransferase class V domain APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 25-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 SUPERFAMILY SSF53448 2 262 1.38E-83 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 SUPERFAMILY SSF53448 323 339 1.38E-83 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 PANTHER PTHR22572 6 364 3.1E-163 T 25-04-2016 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 Gene3D G3DSA:3.90.550.10 4 269 2.6E-87 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 Gene3D G3DSA:3.90.550.10 306 349 2.6E-87 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 SUPERFAMILY SSF51161 279 374 5.89E-15 T 25-04-2016 IPR011004 Trimeric LpxA-like APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 5.7E-144 T 25-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 Pfam PF00483 Nucleotidyl transferase 7 258 1.6E-66 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 373 46.901 T 25-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 25-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 25-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00870 5a317d6098610dd2f459cf6a618dfaa7 379 PANTHER PTHR22572:SF10 6 364 3.1E-163 T 25-04-2016 APQ13_RS02635 74b77749b45faefcad5116204ed3430c 295 Gene3D G3DSA:1.10.3720.10 58 288 3.5E-42 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02635 74b77749b45faefcad5116204ed3430c 295 PANTHER PTHR30425:SF0 1 294 2.2E-112 T 25-04-2016 APQ13_RS02635 74b77749b45faefcad5116204ed3430c 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 287 9.3E-79 T 25-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APQ13_RS02635 74b77749b45faefcad5116204ed3430c 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 291 2.1E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02635 74b77749b45faefcad5116204ed3430c 295 PANTHER PTHR30425 1 294 2.2E-112 T 25-04-2016 APQ13_RS02635 74b77749b45faefcad5116204ed3430c 295 SUPERFAMILY SSF161098 16 277 3.27E-37 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 268 6.7E-8 T 25-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 Gene3D G3DSA:3.40.50.300 5 257 1.9E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 PANTHER PTHR24220:SF336 10 287 1.9E-142 T 25-04-2016 APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 SMART SM00382 38 231 1.6E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 Pfam PF00005 ABC transporter 30 181 8.8E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 SUPERFAMILY SSF52540 8 253 1.69E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06595 3c9022753e4208aa4cb3c200745b2856 308 PANTHER PTHR24220 10 287 1.9E-142 T 25-04-2016 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 Pfam PF00575 S1 RNA binding domain 627 705 2.7E-15 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 SMART SM00955 252 581 5.7E-168 T 25-04-2016 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 SUPERFAMILY SSF50249 126 227 2.28E-5 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 Hamap MF_01895 Ribonuclease R [rnr]. 36 707 54.135 T 25-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 62 705 2.0E-185 T 25-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 SUPERFAMILY SSF50249 628 705 1.49E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 Pfam PF00773 RNB domain 252 578 2.4E-112 T 25-04-2016 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 Pfam PF08206 Ribonuclease B OB domain 72 129 2.1E-16 T 25-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 25-04-2016 IPR022966 Ribonuclease II/R, conserved site APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 SUPERFAMILY SSF50249 66 135 3.51E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 Gene3D G3DSA:2.40.50.140 628 705 8.0E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 PANTHER PTHR23355 70 776 1.9E-229 T 25-04-2016 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 SMART SM00316 626 707 4.1E-15 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 TIGRFAM TIGR02063 RNase_R: ribonuclease R 1 706 3.6E-245 T 25-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 SUPERFAMILY SSF50249 213 625 3.2E-138 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00565 d9232ecb7487b7fa36d8518ad39684db 778 PANTHER PTHR23355:SF9 70 776 1.9E-229 T 25-04-2016 APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 Pfam PF00682 HMGL-like 3 267 3.0E-48 T 25-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 SUPERFAMILY SSF89000 299 454 3.37E-50 T 25-04-2016 APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 Pfam PF02436 Conserved carboxylase domain 296 445 3.7E-50 T 25-04-2016 IPR003379 Carboxylase, conserved domain APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 PANTHER PTHR18866 1 441 3.3E-185 T 25-04-2016 APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 Gene3D G3DSA:3.20.20.70 2 278 1.6E-113 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 PANTHER PTHR18866:SF100 1 441 3.3E-185 T 25-04-2016 APQ13_RS03115 f0fc7adee31418c70f7faf57abb18857 463 SUPERFAMILY SSF51569 1 277 6.23E-88 T 25-04-2016 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 25-04-2016 IPR033135 ClpP, histidine active site APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 SUPERFAMILY SSF52096 8 194 4.97E-67 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 88 99 - T 25-04-2016 IPR018215 ClpP, Ser active site APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 1.6E-43 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 1.6E-43 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 1.6E-43 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 1.6E-43 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 1.6E-43 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 Pfam PF00574 Clp protease 10 192 1.1E-78 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 39.801 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PANTHER PTHR10381 1 194 1.8E-108 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 PANTHER PTHR10381:SF22 1 194 1.8E-108 T 25-04-2016 APQ13_RS00260 de2f233b044db548c162478901f9b3ff 196 Gene3D G3DSA:3.90.226.10 9 194 5.2E-78 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 Pfam PF02887 Pyruvate kinase, alpha/beta domain 385 496 3.1E-34 T 25-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 Gene3D G3DSA:3.20.20.60 197 354 6.0E-97 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 Gene3D G3DSA:3.20.20.60 4 94 6.0E-97 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 499 1.2E-151 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 Pfam PF00224 Pyruvate kinase, barrel domain 3 370 4.0E-146 T 25-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 SUPERFAMILY SSF50800 92 194 1.48E-18 T 25-04-2016 IPR011037 Pyruvate kinase-like, insert domain APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 SUPERFAMILY SSF51621 2 96 5.93E-83 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 SUPERFAMILY SSF51621 184 367 5.93E-83 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 245 271 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 341 357 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 322 340 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 81 97 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 214 228 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 272 296 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PRINTS PR01050 Pyruvate kinase family signature 297 321 2.2E-65 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 Gene3D G3DSA:3.40.1380.20 355 499 1.1E-48 T 25-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 SUPERFAMILY SSF52935 351 499 1.31E-40 T 25-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 Gene3D G3DSA:2.40.33.10 95 196 2.8E-22 T 25-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PANTHER PTHR11817:SF3 1 16 1.3E-196 T 25-04-2016 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PANTHER PTHR11817:SF3 38 500 1.3E-196 T 25-04-2016 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PANTHER PTHR11817 1 16 1.3E-196 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02405 8be42f0c482d8e5dd139ccb92e224c3e 500 PANTHER PTHR11817 38 500 1.3E-196 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS08465 431ab8c64153df98c673d2d9b0c651e5 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 25-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APQ13_RS08465 431ab8c64153df98c673d2d9b0c651e5 61 SUPERFAMILY SSF57716 4 61 7.84E-21 T 25-04-2016 APQ13_RS08465 431ab8c64153df98c673d2d9b0c651e5 61 Gene3D G3DSA:4.10.830.10 3 61 4.5E-27 T 25-04-2016 APQ13_RS08465 431ab8c64153df98c673d2d9b0c651e5 61 Pfam PF00253 Ribosomal protein S14p/S29e 11 60 6.1E-24 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08465 431ab8c64153df98c673d2d9b0c651e5 61 PANTHER PTHR19836 15 61 2.6E-34 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08465 431ab8c64153df98c673d2d9b0c651e5 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.399 T 25-04-2016 IPR023053 Ribosomal protein S14, type Z APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 313 4.0E-115 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 314 36.917 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 PANTHER PTHR11265 1 316 8.0E-140 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 PANTHER PTHR11265:SF0 1 316 8.0E-140 T 25-04-2016 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 SUPERFAMILY SSF53335 6 117 1.22E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 SUPERFAMILY SSF53335 219 314 1.22E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 Gene3D G3DSA:3.40.50.150 222 315 5.3E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 Gene3D G3DSA:3.40.50.150 7 114 5.3E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 PIRSF PIRSF004486 1 315 1.3E-106 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 Pfam PF01795 MraW methylase family 5 314 9.0E-129 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 SUPERFAMILY SSF81799 118 219 9.81E-35 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05705 1ef5a658f6f45d1843a498f052cae706 316 Gene3D G3DSA:1.10.150.170 117 221 6.6E-38 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 Gene3D G3DSA:3.40.190.120 346 443 2.6E-37 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 SUPERFAMILY SSF161098 16 195 1.02E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 207 3.8E-20 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 PANTHER PTHR30177:SF4 268 505 5.9E-215 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 PANTHER PTHR30177:SF4 1 202 5.9E-215 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 Gene3D G3DSA:3.40.190.10 232 345 3.1E-61 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 Gene3D G3DSA:3.40.190.10 455 506 3.1E-61 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 Gene3D G3DSA:1.10.3720.10 8 197 4.5E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 PANTHER PTHR30177 268 505 5.9E-215 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 PANTHER PTHR30177 1 202 5.9E-215 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 SUPERFAMILY SSF53850 236 505 5.83E-71 T 25-04-2016 APQ13_RS02820 81ddfdc06f3bcf79d2b8b3394f5852e9 506 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 236 501 4.9E-64 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APQ13_RS03685 d149f733abd82bde0bf5d9d54f4f0468 201 SUPERFAMILY SSF46689 6 76 5.03E-19 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS03685 d149f733abd82bde0bf5d9d54f4f0468 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.5E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS03685 d149f733abd82bde0bf5d9d54f4f0468 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.5E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS03685 d149f733abd82bde0bf5d9d54f4f0468 201 Gene3D G3DSA:1.10.357.10 10 185 2.9E-32 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS03685 d149f733abd82bde0bf5d9d54f4f0468 201 PANTHER PTHR30055 1 164 2.3E-20 T 25-04-2016 APQ13_RS03685 d149f733abd82bde0bf5d9d54f4f0468 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.4E-14 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 Gene3D G3DSA:3.40.50.300 1 234 4.7E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 SUPERFAMILY SSF52540 1 237 2.18E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 SMART SM00382 26 213 4.8E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 Pfam PF00005 ABC transporter 19 163 3.7E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 PANTHER PTHR24220:SF434 3 237 8.3E-128 T 25-04-2016 APQ13_RS02815 9d6d1207de6e0fdac836c0474d35f088 240 PANTHER PTHR24220 3 237 8.3E-128 T 25-04-2016 APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 PIRSF PIRSF016521 1 409 5.6E-113 T 25-04-2016 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 SUPERFAMILY SSF53474 148 409 3.46E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 Gene3D G3DSA:3.40.50.1820 149 267 3.7E-27 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 Gene3D G3DSA:3.40.50.1820 307 406 3.7E-27 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 210 408 1.9E-34 T 25-04-2016 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 PANTHER PTHR10824 163 409 1.2E-34 T 25-04-2016 APQ13_RS04865 028966c1561bffce936c0a5d7b288fa0 409 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 15 143 4.3E-15 T 25-04-2016 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 Gene3D G3DSA:3.40.1780.10 2 62 1.0E-98 T 25-04-2016 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 Gene3D G3DSA:3.40.1780.10 178 341 1.0E-98 T 25-04-2016 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 PANTHER PTHR30307:SF0 2 341 2.5E-174 T 25-04-2016 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 Gene3D G3DSA:2.40.10.240 64 143 2.2E-28 T 25-04-2016 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 SUPERFAMILY SSF111337 2 341 2.49E-135 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 45.834 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 PANTHER PTHR30307 2 341 2.5E-174 T 25-04-2016 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 341 1.2E-139 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS04860 c1de1783b5b42a78a2794294fbf6e90b 342 Pfam PF02547 Queuosine biosynthesis protein 3 341 9.7E-137 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 2 300 8.2E-115 T 25-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 SUPERFAMILY SSF51905 1 299 5.44E-56 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 Gene3D G3DSA:3.50.50.60 1 114 8.8E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 Gene3D G3DSA:3.50.50.60 236 300 8.8E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PANTHER PTHR22912 1 300 1.3E-134 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 130 150 - T 25-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 289 1.1E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.58E-34 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.58E-34 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 1.58E-34 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 243 1.58E-34 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.58E-34 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PANTHER PTHR22912:SF48 1 300 1.3E-134 T 25-04-2016 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 56 66 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 229 250 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 300 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 190 206 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 1.21E-73 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS05655 06c2f0edb74d0f593e29eb3aed4d86f7 304 Gene3D G3DSA:3.50.50.60 115 235 1.0E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PANTHER PTHR30477 1 346 4.3E-105 T 25-04-2016 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 325 506 6.4E-84 T 25-04-2016 IPR015304 ZinT domain GO:0008270 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PANTHER PTHR30477:SF10 1 346 4.3E-105 T 25-04-2016 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 Gene3D G3DSA:2.40.128.20 320 506 3.9E-84 T 25-04-2016 IPR012674 Calycin APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 SUPERFAMILY SSF50814 320 506 6.32E-81 T 25-04-2016 IPR011038 Calycin-like APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 Gene3D G3DSA:3.40.50.1980 30 191 1.6E-54 T 25-04-2016 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 SUPERFAMILY SSF53807 34 309 1.37E-82 T 25-04-2016 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00691 Adhesin B signature 35 56 5.5E-18 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00691 Adhesin B signature 79 98 5.5E-18 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00691 Adhesin B signature 290 308 5.5E-18 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00691 Adhesin B signature 197 214 5.5E-18 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00691 Adhesin B signature 60 78 5.5E-18 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00691 Adhesin B signature 141 160 5.5E-18 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 Gene3D G3DSA:3.40.50.1980 192 310 2.2E-37 T 25-04-2016 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 309 1.6E-78 T 25-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00690 Adhesin family signature 66 79 6.6E-12 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00690 Adhesin family signature 35 53 6.6E-12 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00690 Adhesin family signature 79 96 6.6E-12 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS01840 85f9e61fe1d87fbba4c4be0922cbae27 506 PRINTS PR00690 Adhesin family signature 197 218 6.6E-12 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 PANTHER PTHR12112 606 618 5.3E-69 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 PANTHER PTHR12112 36 521 5.3E-69 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 Pfam PF02272 DHHA1 domain 588 644 1.1E-9 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 Gene3D G3DSA:3.90.1640.10 339 530 1.8E-37 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 PANTHER PTHR12112:SF18 606 618 5.3E-69 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 PANTHER PTHR12112:SF18 36 521 5.3E-69 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 Gene3D G3DSA:3.30.450.20 61 144 1.9E-4 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 SUPERFAMILY SSF64182 339 639 9.94E-64 T 25-04-2016 APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 PIRSF PIRSF026583 1 657 9.7E-254 T 25-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA APQ13_RS07790 32e86d993672b0e62f21fe7e63142527 657 Pfam PF01368 DHH family 341 496 4.5E-18 T 25-04-2016 IPR001667 DDH domain APQ13_RS07770 f6d40545aa79e78bf829a027449ad018 196 Pfam PF01464 Transglycosylase SLT domain 126 168 5.0E-5 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 APQ13_RS07770 f6d40545aa79e78bf829a027449ad018 196 SUPERFAMILY SSF53955 125 188 4.97E-9 T 25-04-2016 IPR023346 Lysozyme-like domain APQ13_RS07770 f6d40545aa79e78bf829a027449ad018 196 Gene3D G3DSA:1.10.530.10 127 173 2.4E-6 T 25-04-2016 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 SUPERFAMILY SSF55973 5 110 1.88E-42 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Gene3D G3DSA:3.30.300.10 12 146 1.2E-42 T 25-04-2016 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 126 243 6.7E-50 T 25-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 SUPERFAMILY SSF55973 245 395 4.71E-68 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 394 2.9E-178 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 SUPERFAMILY SSF55973 121 244 8.83E-53 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 PANTHER PTHR11964 1 390 2.8E-267 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 395 56.744 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Gene3D G3DSA:3.30.300.10 256 396 3.6E-69 T 25-04-2016 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Gene3D G3DSA:3.30.300.10 147 245 7.3E-50 T 25-04-2016 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 127 137 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 PIRSF PIRSF000497 1 396 2.4E-175 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 384 4.4E-68 T 25-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS00715 1a92faeddf400de447982bdcf119d2a6 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.4E-38 T 25-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 159 1.0E-54 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PANTHER PTHR21342:SF1 1 159 1.5E-54 T 25-04-2016 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PANTHER PTHR21342 1 159 1.5E-54 T 25-04-2016 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 3.7E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 3.7E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 88 104 3.7E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 3.7E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 115 137 3.7E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 Pfam PF01467 Cytidylyltransferase-like 7 136 3.2E-14 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 SUPERFAMILY SSF52374 4 158 4.5E-39 T 25-04-2016 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 161 31.778 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 4 75 0.01 T 25-04-2016 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 9.1E-14 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APQ13_RS05365 2a0b7130d7133e2a5e7b9771066b2ba8 166 Gene3D G3DSA:3.40.50.620 1 159 3.0E-47 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 SUPERFAMILY SSF53167 2 233 2.62E-85 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 4.4E-89 T 25-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 25-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 Pfam PF01048 Phosphorylase superfamily 16 218 2.1E-43 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 Gene3D G3DSA:3.40.50.1580 10 233 4.0E-77 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 42.903 T 25-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 PANTHER PTHR21234 1 234 3.3E-63 T 25-04-2016 IPR018017 Nucleoside phosphorylase APQ13_RS02230 244267c808a1271b019da41c77a2ad3e 234 PANTHER PTHR21234:SF8 1 234 3.3E-63 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 PANTHER PTHR30177 8 277 6.3E-165 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 Gene3D G3DSA:3.40.190.10 316 402 6.2E-26 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 PANTHER PTHR30177:SF2 8 277 6.3E-165 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 SUPERFAMILY SSF161098 88 273 6.28E-40 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 Gene3D G3DSA:1.10.3720.10 50 273 3.5E-36 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 277 9.6E-28 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 Gene3D G3DSA:3.40.190.100 405 525 6.6E-38 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 PANTHER PTHR30177 351 568 6.3E-165 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 PANTHER PTHR30177:SF2 351 568 6.3E-165 T 25-04-2016 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 322 564 2.5E-64 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APQ13_RS02985 3979fdb1a2532e6499e4a36c13f42eeb 576 SUPERFAMILY SSF53850 317 575 7.47E-83 T 25-04-2016 APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 SUPERFAMILY SSF52922 193 328 2.75E-41 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 Gene3D G3DSA:3.40.50.920 198 326 4.7E-46 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 Pfam PF02779 Transketolase, pyrimidine binding domain 7 181 5.1E-47 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 SMART SM00861 7 182 5.5E-62 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 SUPERFAMILY SSF52518 7 195 6.42E-63 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 PANTHER PTHR11624 1 331 1.5E-166 T 25-04-2016 IPR033247 Transketolase family APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 Pfam PF02780 Transketolase, C-terminal domain 197 320 6.7E-42 T 25-04-2016 IPR033248 Transketolase, C-terminal domain APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 PANTHER PTHR11624:SF78 1 331 1.5E-166 T 25-04-2016 APQ13_RS07090 29fd3bd86666a9e538e2f1ff166e66cf 331 Gene3D G3DSA:3.40.50.970 4 197 5.8E-78 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 Gene3D G3DSA:3.90.1150.10 269 377 1.8E-34 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 Gene3D G3DSA:3.40.640.10 46 268 4.3E-84 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 SUPERFAMILY SSF53383 4 376 2.34E-115 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 PANTHER PTHR11986 8 379 1.5E-160 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 PANTHER PTHR11986:SF79 8 379 1.5E-160 T 25-04-2016 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 376 44.036 T 25-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 Pfam PF00202 Aminotransferase class-III 12 374 1.1E-112 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 202 239 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APQ13_RS04705 04de9a41fc60d3fa8df0fb91c9f09625 379 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 375 5.9E-145 T 25-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 SUPERFAMILY SSF51735 3 192 1.97E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 372 3.2E-69 T 25-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 153 165 - T 25-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 SUPERFAMILY SSF48179 205 379 3.4E-41 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 PANTHER PTHR30524:SF0 1 381 1.3E-173 T 25-04-2016 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 Gene3D G3DSA:1.10.1040.10 205 380 1.5E-38 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 126 2.2E-32 T 25-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 1.9E-21 T 25-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 1.9E-21 T 25-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 PRINTS PR00084 Mannitol dehydrogenase signature 117 130 1.9E-21 T 25-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 PRINTS PR00084 Mannitol dehydrogenase signature 153 166 1.9E-21 T 25-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 Gene3D G3DSA:3.40.50.720 3 195 9.6E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 PANTHER PTHR30524 1 381 1.3E-173 T 25-04-2016 APQ13_RS02440 f023d1af8971da82040271a5ae414139 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 42.711 T 25-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 111 1.9E-45 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 SUPERFAMILY SSF54843 6 114 6.54E-45 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 87 111 - T 25-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 Gene3D G3DSA:3.90.470.10 6 114 3.2E-45 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 Pfam PF00237 Ribosomal protein L22p/L17e 12 112 1.3E-35 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 PANTHER PTHR13501 1 113 9.8E-51 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08425 de444d13ac73864ba187904ff60e1645 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 114 29.876 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 SMART SM00382 377 566 4.6E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 SUPERFAMILY SSF90123 5 329 1.14E-47 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 Gene3D G3DSA:1.20.1560.10 5 329 3.9E-43 T 25-04-2016 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 Pfam PF00664 ABC transporter transmembrane region 17 266 7.4E-22 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 PANTHER PTHR24221:SF240 1 272 2.1E-150 T 25-04-2016 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 PANTHER PTHR24221:SF240 290 599 2.1E-150 T 25-04-2016 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 Pfam PF00005 ABC transporter 369 518 6.4E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 SUPERFAMILY SSF52540 347 590 2.17E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 Gene3D G3DSA:3.40.50.300 350 584 2.4E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 PANTHER PTHR24221 1 272 2.1E-150 T 25-04-2016 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 PANTHER PTHR24221 290 599 2.1E-150 T 25-04-2016 APQ13_RS03580 54a3ae225533b74fc31ef906b268c273 600 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 PANTHER PTHR24221:SF258 10 580 2.0E-225 T 25-04-2016 APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 Pfam PF00005 ABC transporter 357 505 4.6E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 SMART SM00382 366 557 7.2E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 SUPERFAMILY SSF52540 335 575 1.0E-84 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 Gene3D G3DSA:3.40.50.300 341 570 5.3E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 SUPERFAMILY SSF90123 12 327 4.58E-71 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 PANTHER PTHR24221 10 580 2.0E-225 T 25-04-2016 APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 Gene3D G3DSA:1.20.1560.10 13 322 1.4E-75 T 25-04-2016 APQ13_RS05330 177e729a056d96357f1ad3740fa116e4 580 Pfam PF00664 ABC transporter transmembrane region 26 295 1.3E-37 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 6.7E-28 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 PANTHER PTHR26402:SF614 2 232 9.0E-105 T 25-04-2016 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 SUPERFAMILY SSF52172 1 126 1.71E-42 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 PANTHER PTHR26402 2 232 9.0E-105 T 25-04-2016 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 Gene3D G3DSA:3.40.50.2300 1 124 6.9E-42 T 25-04-2016 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 SUPERFAMILY SSF46894 137 231 2.55E-29 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 Gene3D G3DSA:1.10.10.10 136 232 1.3E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 SMART SM00448 2 112 4.9E-46 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS00970 cffa11e030ada0a0f54c3244e8bdf00d 235 SMART SM00862 155 231 7.4E-27 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 PANTHER PTHR30345:SF4 1 171 1.3E-118 T 25-04-2016 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 2.3E-36 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 PIRSF PIRSF005384 1 148 1.5E-53 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 PANTHER PTHR30345 1 171 1.3E-118 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 Gene3D G3DSA:3.40.1400.10 1 155 1.8E-53 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 SUPERFAMILY SSF89623 1 149 2.75E-48 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 Hamap MF_01556 Galactose-6-phosphate isomerase subunit LacB [lacB]. 1 171 45.809 T 25-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 Pfam PF02502 Ribose/Galactose Isomerase 3 141 4.2E-42 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01040 8638ae231a55f6f58b23ae7f0aea2a63 171 TIGRFAM TIGR01119 lacB: galactose-6-phosphate isomerase, LacB subunit 1 171 2.3E-112 T 25-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 448 35.953 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 PANTHER PTHR23135 1 451 2.6E-167 T 25-04-2016 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 SUPERFAMILY SSF53244 309 447 9.34E-38 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 Gene3D G3DSA:3.40.50.720 6 100 2.7E-18 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 383 3.1E-9 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 PANTHER PTHR23135:SF2 1 451 2.6E-167 T 25-04-2016 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 446 8.8E-127 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 SUPERFAMILY SSF53623 103 307 5.76E-57 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 Gene3D G3DSA:3.90.190.20 311 443 2.3E-42 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 Pfam PF08245 Mur ligase middle domain 117 290 3.1E-36 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 Gene3D G3DSA:3.40.1190.10 102 308 3.8E-63 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS05230 9aa4da0ec6e77cbeb5806d55e05810fe 451 SUPERFAMILY SSF51984 10 100 1.96E-17 T 25-04-2016 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 754 0.0 T 25-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 270 2.1E-81 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 PANTHER PTHR11070:SF7 1 513 3.3E-231 T 25-04-2016 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 PANTHER PTHR11070:SF7 532 671 3.3E-231 T 25-04-2016 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 PANTHER PTHR11070:SF7 694 755 3.3E-231 T 25-04-2016 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Pfam PF13361 UvrD-like helicase C-terminal domain 276 619 6.5E-77 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 PANTHER PTHR11070 1 513 3.3E-231 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 PANTHER PTHR11070 532 671 3.3E-231 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 PANTHER PTHR11070 694 755 3.3E-231 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 SUPERFAMILY SSF52540 1 643 1.06E-173 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Gene3D G3DSA:1.10.10.160 112 185 5.1E-24 T 25-04-2016 IPR013986 DExx box DNA helicase domain APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Gene3D G3DSA:3.40.50.300 186 284 4.2E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Gene3D G3DSA:3.40.50.300 3 107 4.2E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Gene3D G3DSA:1.10.486.10 387 543 2.5E-44 T 25-04-2016 APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Gene3D G3DSA:3.40.50.300 285 386 7.0E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02475 8b380c951f44a418eb91a669f4de1f19 758 Gene3D G3DSA:3.40.50.300 555 643 7.0E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04430 22ea20b0e415d91886d0c33c78022377 70 SUPERFAMILY SSF89447 9 54 1.48E-11 T 25-04-2016 APQ13_RS04430 22ea20b0e415d91886d0c33c78022377 70 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 11 53 4.8E-14 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APQ13_RS04430 22ea20b0e415d91886d0c33c78022377 70 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 13 53 5.9E-8 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APQ13_RS04430 22ea20b0e415d91886d0c33c78022377 70 Gene3D G3DSA:2.10.260.10 11 46 2.9E-10 T 25-04-2016 APQ13_RS04430 22ea20b0e415d91886d0c33c78022377 70 SMART SM00966 12 58 2.5E-9 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APQ13_RS00320 15dd9925b78dcec77accb2fc88f18e57 110 Hamap MF_01159 Initiation-control protein YabA. 1 109 24.264 T 25-04-2016 IPR010377 Initiation control protein YabA GO:0006260 APQ13_RS00320 15dd9925b78dcec77accb2fc88f18e57 110 PANTHER PTHR41240 2 110 7.7E-30 T 25-04-2016 APQ13_RS00320 15dd9925b78dcec77accb2fc88f18e57 110 PIRSF PIRSF021439 1 110 2.7E-40 T 25-04-2016 IPR010377 Initiation control protein YabA GO:0006260 APQ13_RS00320 15dd9925b78dcec77accb2fc88f18e57 110 SUPERFAMILY SSF58026 23 55 8.63E-5 T 25-04-2016 APQ13_RS00320 15dd9925b78dcec77accb2fc88f18e57 110 Pfam PF06156 Protein of unknown function (DUF972) 1 105 4.2E-33 T 25-04-2016 IPR010377 Initiation control protein YabA GO:0006260 APQ13_RS00320 15dd9925b78dcec77accb2fc88f18e57 110 Gene3D G3DSA:1.20.5.490 23 50 6.2E-5 T 25-04-2016 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 PIRSF PIRSF001563 1 416 1.4E-114 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 409 3.8E-116 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 SUPERFAMILY SSF53623 2 292 7.23E-83 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 PANTHER PTHR11136 1 418 1.5E-107 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 Gene3D G3DSA:3.90.190.20 294 413 3.1E-19 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 PANTHER PTHR11136:SF0 1 418 1.5E-107 T 25-04-2016 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 Gene3D G3DSA:3.40.1190.10 3 293 2.5E-81 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 SUPERFAMILY SSF53244 294 411 3.66E-18 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 Pfam PF02875 Mur ligase family, glutamate ligase domain 292 356 3.6E-6 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS03935 24c9e2869554bc3617dd46f2b298f7d0 418 Pfam PF08245 Mur ligase middle domain 45 266 6.6E-8 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 Hamap MF_00973 Gluconeogenesis factor. 2 322 33.469 T 25-04-2016 IPR010119 Gluconeogenesis factor APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 320 2.6E-118 T 25-04-2016 IPR010119 Gluconeogenesis factor APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 PANTHER PTHR30135 1 324 1.3E-129 T 25-04-2016 APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 PANTHER PTHR30135:SF3 1 324 1.3E-129 T 25-04-2016 APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 SUPERFAMILY SSF142338 3 317 4.05E-98 T 25-04-2016 APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 Gene3D G3DSA:3.40.50.10680 76 321 4.7E-54 T 25-04-2016 APQ13_RS01825 0da529444c0f7e3e19fba67ab64cacb8 325 Pfam PF01933 Uncharacterised protein family UPF0052 6 297 1.4E-92 T 25-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 7.7E-12 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 7.7E-12 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 7.7E-12 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 1.3E-53 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 356 47.773 T 25-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PANTHER PTHR11405 3 355 2.4E-211 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00097 Anthranilate synthase component II signature 215 224 5.6E-7 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00097 Anthranilate synthase component II signature 327 340 5.6E-7 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00097 Anthranilate synthase component II signature 242 253 5.6E-7 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 Gene3D G3DSA:3.50.30.20 3 146 1.3E-61 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 Gene3D G3DSA:3.40.50.880 157 354 3.0E-67 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 SUPERFAMILY SSF52317 139 352 4.4E-58 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 3.1E-35 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 3.1E-35 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 3.1E-35 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 3.1E-35 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 3.1E-35 T 25-04-2016 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 SUPERFAMILY SSF52021 3 146 3.79E-57 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 SMART SM01097 2 132 1.3E-87 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 Pfam PF00117 Glutamine amidotransferase class-I 175 350 1.1E-46 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APQ13_RS03840 7c84153762c85fd61513132feca8c743 362 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 353 1.7E-147 T 25-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 SUPERFAMILY SSF55347 152 315 1.64E-66 T 25-04-2016 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PIRSF PIRSF000149 1 337 3.7E-113 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 25-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 315 6.2E-64 T 25-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 SMART SM00846 3 153 7.0E-80 T 25-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 Gene3D G3DSA:3.30.360.10 162 317 2.3E-70 T 25-04-2016 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 Gene3D G3DSA:3.40.50.720 1 161 4.1E-67 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 SUPERFAMILY SSF51735 3 169 8.72E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PANTHER PTHR10836 1 335 5.3E-237 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 7.0E-131 T 25-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.2E-33 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.2E-33 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.2E-33 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.2E-33 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.2E-33 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 PANTHER PTHR10836:SF57 1 335 5.3E-237 T 25-04-2016 APQ13_RS06105 a0a39756d2431a80519dad10d173417d 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 6.9E-52 T 25-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 Gene3D G3DSA:1.10.274.10 24 135 4.3E-41 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 SUPERFAMILY SSF52009 127 247 1.96E-36 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 2.9E-228 T 25-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 7.0E-33 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 25-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 SUPERFAMILY SSF47831 24 145 1.03E-35 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 545 9.7E-131 T 25-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 25-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 Gene3D G3DSA:3.50.30.10 136 258 6.7E-43 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 Gene3D G3DSA:3.20.20.60 259 573 2.5E-113 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 PANTHER PTHR22931 67 554 3.0E-206 T 25-04-2016 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 SUPERFAMILY SSF51621 251 553 2.28E-109 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 1.3E-32 T 25-04-2016 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 1.3E-32 T 25-04-2016 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 1.3E-32 T 25-04-2016 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 1.3E-32 T 25-04-2016 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 1.3E-21 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APQ13_RS04660 dc736cf33c1e7e6683cf8d2dab5fba51 577 PIRSF PIRSF000732 1 576 2.6E-212 T 25-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 SMART SM00421 135 192 2.0E-24 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 SMART SM00448 1 113 5.1E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 PANTHER PTHR26402:SF580 1 197 4.9E-97 T 25-04-2016 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 192 5.0E-21 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 SUPERFAMILY SSF46894 123 198 4.42E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 Gene3D G3DSA:3.40.50.2300 1 142 2.3E-33 T 25-04-2016 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 SUPERFAMILY SSF52172 1 128 1.85E-30 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS00830 029c0113585604c9ed7857613424daba 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.1E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.1E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.1E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 PANTHER PTHR26402 1 197 4.9E-97 T 25-04-2016 APQ13_RS00830 029c0113585604c9ed7857613424daba 198 Gene3D G3DSA:1.10.10.10 143 197 1.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00740 a3f649f72a5cb6d119dd5978dc45332f 415 Gene3D G3DSA:3.40.190.10 36 160 6.4E-18 T 25-04-2016 APQ13_RS00740 a3f649f72a5cb6d119dd5978dc45332f 415 SUPERFAMILY SSF53850 38 389 2.23E-57 T 25-04-2016 APQ13_RS00740 a3f649f72a5cb6d119dd5978dc45332f 415 Gene3D G3DSA:3.40.190.10 161 332 4.0E-29 T 25-04-2016 APQ13_RS00740 a3f649f72a5cb6d119dd5978dc45332f 415 Pfam PF13416 Bacterial extracellular solute-binding protein 54 354 2.1E-48 T 25-04-2016 APQ13_RS00740 a3f649f72a5cb6d119dd5978dc45332f 415 PANTHER PTHR30061 14 394 9.5E-39 T 25-04-2016 APQ13_RS00740 a3f649f72a5cb6d119dd5978dc45332f 415 PANTHER PTHR30061:SF21 14 394 9.5E-39 T 25-04-2016 APQ13_RS03250 c91a879da936709496ea834542960d56 320 PANTHER PTHR30472:SF27 15 319 4.5E-137 T 25-04-2016 APQ13_RS03250 c91a879da936709496ea834542960d56 320 Pfam PF01032 FecCD transport family 15 315 3.4E-63 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APQ13_RS03250 c91a879da936709496ea834542960d56 320 SUPERFAMILY SSF81345 4 315 2.22E-64 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS03250 c91a879da936709496ea834542960d56 320 Gene3D G3DSA:1.10.3470.10 2 317 2.1E-66 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS03250 c91a879da936709496ea834542960d56 320 PANTHER PTHR30472 15 319 4.5E-137 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APQ13_RS06015 456f54ec7323eb9250d6fc45cb487df0 300 SUPERFAMILY SSF47413 2 72 3.26E-10 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS06015 456f54ec7323eb9250d6fc45cb487df0 300 Gene3D G3DSA:1.10.260.40 2 73 4.5E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 PANTHER PTHR23501 8 440 2.1E-74 T 25-04-2016 APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 Pfam PF07690 Major Facilitator Superfamily 16 406 1.9E-44 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 SUPERFAMILY SSF103473 6 188 3.66E-52 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 SUPERFAMILY SSF103473 245 439 3.66E-52 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.9E-7 T 25-04-2016 APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 2.9E-7 T 25-04-2016 APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 Gene3D G3DSA:1.20.1250.20 261 445 5.3E-14 T 25-04-2016 APQ13_RS07915 c3c3d14f7090abc88ff4ba7476cdbfe5 453 Gene3D G3DSA:1.20.1250.20 13 185 1.9E-25 T 25-04-2016 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 SUPERFAMILY SSF47917 351 466 2.09E-50 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 SUPERFAMILY SSF50615 1 78 1.44E-22 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 7.6E-253 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 4.7E-67 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 Gene3D G3DSA:3.40.50.300 80 349 1.8E-108 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.967 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 3.4E-20 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 Gene3D G3DSA:1.10.1140.10 351 466 1.3E-50 T 25-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 SMART SM00382 147 332 4.1E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 PANTHER PTHR15184:SF8 1 466 0.0 T 25-04-2016 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 SUPERFAMILY SSF52540 81 353 3.91E-89 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 PANTHER PTHR15184 1 466 0.0 T 25-04-2016 APQ13_RS00920 ad159c429f9ad8b33d820a9beeb0ac8e 468 Gene3D G3DSA:2.40.10.170 1 78 4.8E-29 T 25-04-2016 APQ13_RS03440 08f59c928b7c08e0102222a22eca008f 316 SUPERFAMILY SSF82282 4 315 7.19E-78 T 25-04-2016 IPR003726 Homocysteine-binding domain APQ13_RS03440 08f59c928b7c08e0102222a22eca008f 316 Pfam PF02574 Homocysteine S-methyltransferase 14 312 6.5E-67 T 25-04-2016 IPR003726 Homocysteine-binding domain APQ13_RS03440 08f59c928b7c08e0102222a22eca008f 316 PANTHER PTHR21091 8 316 3.1E-85 T 25-04-2016 APQ13_RS03440 08f59c928b7c08e0102222a22eca008f 316 Gene3D G3DSA:3.20.20.330 4 315 2.7E-88 T 25-04-2016 IPR003726 Homocysteine-binding domain APQ13_RS03440 08f59c928b7c08e0102222a22eca008f 316 PANTHER PTHR21091:SF123 8 316 3.1E-85 T 25-04-2016 APQ13_RS07485 594d72c29519aed79f9c460b8644597b 272 PIRSF PIRSF038471 1 272 3.7E-51 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APQ13_RS07485 594d72c29519aed79f9c460b8644597b 272 Pfam PF04085 rod shape-determining protein MreC 119 270 2.6E-35 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APQ13_RS07485 594d72c29519aed79f9c460b8644597b 272 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 270 6.3E-38 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APQ13_RS07485 594d72c29519aed79f9c460b8644597b 272 PANTHER PTHR34138:SF1 1 270 5.0E-47 T 25-04-2016 APQ13_RS07485 594d72c29519aed79f9c460b8644597b 272 PANTHER PTHR34138 1 270 5.0E-47 T 25-04-2016 APQ13_RS04890 6b6d914296bf0027fdc40fedd22f5489 346 Gene3D G3DSA:1.10.8.60 147 232 4.3E-5 T 25-04-2016 APQ13_RS04890 6b6d914296bf0027fdc40fedd22f5489 346 SUPERFAMILY SSF52540 7 210 1.53E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04890 6b6d914296bf0027fdc40fedd22f5489 346 SUPERFAMILY SSF48019 216 344 2.04E-22 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APQ13_RS04890 6b6d914296bf0027fdc40fedd22f5489 346 PANTHER PTHR34388 1 346 1.5E-52 T 25-04-2016 APQ13_RS04890 6b6d914296bf0027fdc40fedd22f5489 346 Pfam PF06144 DNA polymerase III, delta subunit 20 191 5.8E-44 T 25-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APQ13_RS04890 6b6d914296bf0027fdc40fedd22f5489 346 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 341 5.3E-77 T 25-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APQ13_RS09290 8b9ba8bbf104960c9541ecf37754cf90 100 PANTHER PTHR15004:SF0 1 95 2.7E-30 T 25-04-2016 APQ13_RS09290 8b9ba8bbf104960c9541ecf37754cf90 100 SUPERFAMILY SSF141000 2 93 5.89E-29 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APQ13_RS09290 8b9ba8bbf104960c9541ecf37754cf90 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.173 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APQ13_RS09290 8b9ba8bbf104960c9541ecf37754cf90 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 2.5E-29 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APQ13_RS09290 8b9ba8bbf104960c9541ecf37754cf90 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.1E-17 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APQ13_RS09290 8b9ba8bbf104960c9541ecf37754cf90 100 PANTHER PTHR15004 1 95 2.7E-30 T 25-04-2016 APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 PANTHER PTHR10977 2 310 2.1E-85 T 25-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 Pfam PF00288 GHMP kinases N terminal domain 101 145 5.4E-7 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 PANTHER PTHR10977:SF3 2 310 2.1E-85 T 25-04-2016 APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 SUPERFAMILY SSF54211 14 183 2.73E-36 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 Gene3D G3DSA:3.30.70.890 179 308 8.5E-52 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 107 118 - T 25-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 Gene3D G3DSA:3.30.230.10 11 178 2.1E-60 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 SUPERFAMILY SSF55060 178 310 9.93E-43 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 PIRSF PIRSF015950 8 320 1.0E-96 T 25-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 APQ13_RS03510 58e3024e095da8e9598e01ceaa898438 320 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 17 310 1.1E-124 T 25-04-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 PANTHER PTHR11373 30 184 2.4E-42 T 25-04-2016 APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 PANTHER PTHR11373:SF29 30 184 2.4E-42 T 25-04-2016 APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 Gene3D G3DSA:1.10.3210.10 12 229 1.1E-57 T 25-04-2016 IPR006674 HD domain APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 Gene3D G3DSA:1.10.3550.10 342 422 8.2E-7 T 25-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 SMART SM00471 69 243 2.8E-9 T 25-04-2016 IPR003607 HD/PDEase domain APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 36 426 8.7E-97 T 25-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 Pfam PF01966 HD domain 73 229 2.8E-10 T 25-04-2016 IPR006674 HD domain APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 Gene3D G3DSA:1.10.3410.10 230 341 2.0E-13 T 25-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 Pfam PF13286 Phosphohydrolase-associated domain 337 422 3.9E-14 T 25-04-2016 IPR026875 Phosphohydrolase-associated domain APQ13_RS09535 e8dac0050fa25cd1a96532067fd64781 446 SUPERFAMILY SSF109604 29 437 3.93E-60 T 25-04-2016 APQ13_RS09045 c62f3c148362bea1e38c2c612de07046 272 PANTHER PTHR32502 1 272 5.7E-125 T 25-04-2016 APQ13_RS09045 c62f3c148362bea1e38c2c612de07046 272 Pfam PF03609 PTS system sorbose-specific iic component 4 240 3.3E-66 T 25-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APQ13_RS09045 c62f3c148362bea1e38c2c612de07046 272 PANTHER PTHR32502:SF10 1 272 5.7E-125 T 25-04-2016 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 1.0E-36 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 Gene3D G3DSA:3.30.1490.20 130 202 5.2E-30 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-45 T 25-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 SMART SM00878 337 444 1.6E-54 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 SUPERFAMILY SSF51246 332 445 1.26E-39 T 25-04-2016 IPR011054 Rudiment single hybrid motif APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 8.1E-75 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 Gene3D G3DSA:3.30.470.20 206 447 2.1E-93 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 SUPERFAMILY SSF56059 83 353 1.77E-67 T 25-04-2016 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 SUPERFAMILY SSF52440 1 113 1.15E-48 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 PANTHER PTHR18866 1 456 1.8E-286 T 25-04-2016 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.9E-202 T 25-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APQ13_RS09670 9fd71ab707d80e55d96cfd8a2b405514 456 Gene3D G3DSA:3.40.50.20 1 129 1.5E-49 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 Pfam PF00005 ABC transporter 544 693 3.3E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 Pfam PF00664 ABC transporter transmembrane region 212 481 4.1E-56 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 SUPERFAMILY SSF52540 521 759 2.49E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 Pfam PF03412 Peptidase C39 family 50 186 3.1E-40 T 25-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 Gene3D G3DSA:1.20.1560.10 201 506 9.1E-71 T 25-04-2016 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 Gene3D G3DSA:3.40.50.300 528 757 7.7E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 SMART SM00382 553 738 1.3E-21 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 ProSitePatterns PS00211 ABC transporters family signature. 665 679 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 SUPERFAMILY SSF90123 201 502 1.11E-62 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 Gene3D G3DSA:3.90.70.10 57 185 5.5E-16 T 25-04-2016 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 PANTHER PTHR24221 198 760 8.6E-169 T 25-04-2016 APQ13_RS06495 0daf61ea6ca8f0131b06b5f222ef593d 760 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 55 760 0.0 T 25-04-2016 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 KEGG: 00900+3.4.22.- APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Hamap MF_00141 Elongation factor P [efp]. 1 186 47.243 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 9.7E-18 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 SUPERFAMILY SSF50249 129 186 1.66E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 2.4E-22 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 SUPERFAMILY SSF50104 1 64 5.66E-17 T 25-04-2016 IPR008991 Translation protein SH3-like domain APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 SMART SM01185 68 122 8.1E-21 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 25-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.5E-22 T 25-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Gene3D G3DSA:2.30.30.30 1 64 7.8E-23 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 TIGRFAM TIGR00038 efp: translation elongation factor P 2 186 4.6E-67 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 SMART SM00841 130 185 3.9E-29 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 SUPERFAMILY SSF50249 66 130 1.16E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Gene3D G3DSA:2.40.50.140 66 128 9.5E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 Gene3D G3DSA:2.40.50.140 129 186 1.9E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 PANTHER PTHR30053 1 186 1.7E-76 T 25-04-2016 APQ13_RS09180 d0e0745d2eef7063ff13f2405d9fddda 186 PIRSF PIRSF005901 1 186 1.6E-62 T 25-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APQ13_RS02340 87c978af86c07f5d19ff9032601e84ec 76 Pfam PF11184 Protein of unknown function (DUF2969) 1 75 1.7E-20 T 25-04-2016 IPR021351 Protein of unknown function DUF2969 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 Gene3D G3DSA:3.30.230.10 230 343 1.4E-20 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 Gene3D G3DSA:2.30.42.10 132 201 5.3E-7 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 PANTHER PTHR10046 223 295 3.3E-36 T 25-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 PANTHER PTHR10046:SF48 311 343 3.3E-36 T 25-04-2016 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 Pfam PF13180 PDZ domain 131 195 4.2E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 233 313 1.9E-4 T 25-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 SUPERFAMILY SSF54211 161 343 5.69E-21 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 PANTHER PTHR10046 311 343 3.3E-36 T 25-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APQ13_RS05360 add73329be3392e904a17b8a014d95c0 346 PANTHER PTHR10046:SF48 223 295 3.3E-36 T 25-04-2016 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 Pfam PF01381 Helix-turn-helix 22 70 2.6E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 SMART SM00530 20 75 4.4E-9 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 SUPERFAMILY SSF51306 183 296 1.83E-30 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 SUPERFAMILY SSF47413 11 74 2.59E-10 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 PANTHER PTHR33516:SF2 165 296 2.9E-18 T 25-04-2016 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 PANTHER PTHR33516 165 296 2.9E-18 T 25-04-2016 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 Gene3D G3DSA:1.10.260.40 14 70 8.1E-12 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 Pfam PF00717 Peptidase S24-like 219 284 2.9E-18 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B APQ13_RS01465 5d51ad0bba75d942b43fb569b00a6e20 297 Gene3D G3DSA:2.10.109.10 183 296 7.7E-32 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 PIRSF PIRSF003101 1 452 2.2E-126 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Gene3D G3DSA:3.90.640.10 233 295 4.9E-22 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Pfam PF14450 Cell division protein FtsA 206 365 2.7E-16 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Pfam PF14450 Cell division protein FtsA 9 180 4.6E-8 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 7.4E-97 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 SUPERFAMILY SSF53067 6 195 7.54E-57 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Gene3D G3DSA:3.30.420.40 296 348 2.5E-16 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Gene3D G3DSA:3.30.420.40 195 232 2.5E-16 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Gene3D G3DSA:3.30.420.40 1 138 2.1E-51 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 PANTHER PTHR32432:SF4 1 398 1.4E-137 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 SMART SM00842 7 194 3.6E-86 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Pfam PF02491 SHS2 domain inserted in FTSA 85 160 3.9E-21 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 PANTHER PTHR32432 1 398 1.4E-137 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 SUPERFAMILY SSF53067 197 364 3.02E-36 T 25-04-2016 APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Pfam PF11983 Membrane-attachment and polymerisation-promoting switch 377 453 2.7E-19 T 25-04-2016 IPR021873 Cell division protein FtsA, C-terminal APQ13_RS05215 0dd04a558938be66ce351f370b9b1cbf 453 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 452 27.529 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 PANTHER PTHR10000 4 274 2.9E-54 T 25-04-2016 APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 PANTHER PTHR10000:SF8 4 274 2.9E-54 T 25-04-2016 APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 SUPERFAMILY SSF56784 2 273 4.86E-67 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 268 6.3E-69 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 25-04-2016 APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 268 3.1E-55 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 Gene3D G3DSA:3.40.50.1000 2 76 3.5E-50 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 Gene3D G3DSA:3.40.50.1000 187 273 3.5E-50 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 241 1.7E-33 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS05440 5bbaae3d9eddf82ae05af8432813a348 274 Gene3D G3DSA:3.30.1240.10 90 186 4.1E-16 T 25-04-2016 APQ13_RS08920 a13a76ef6d42683242d309266b3cc3c9 299 PANTHER PTHR30050 26 299 1.1E-88 T 25-04-2016 APQ13_RS08920 a13a76ef6d42683242d309266b3cc3c9 299 PANTHER PTHR30050:SF8 26 299 1.1E-88 T 25-04-2016 APQ13_RS08920 a13a76ef6d42683242d309266b3cc3c9 299 Pfam PF07319 Primosomal protein DnaI N-terminus 2 89 5.8E-22 T 25-04-2016 IPR009928 Primosomal DnaI, N-terminal APQ13_RS08920 a13a76ef6d42683242d309266b3cc3c9 299 SUPERFAMILY SSF52540 116 267 5.99E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08920 a13a76ef6d42683242d309266b3cc3c9 299 Pfam PF01695 IstB-like ATP binding protein 139 267 2.5E-12 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APQ13_RS08920 a13a76ef6d42683242d309266b3cc3c9 299 Gene3D G3DSA:3.40.50.300 102 290 8.6E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 SUPERFAMILY SSF55729 297 390 5.14E-26 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 SUPERFAMILY SSF55729 168 240 5.14E-26 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 Gene3D G3DSA:3.40.630.30 1 170 4.0E-63 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 SUPERFAMILY SSF55729 5 164 7.95E-51 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 PANTHER PTHR36174 1 404 1.2E-118 T 25-04-2016 APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 Pfam PF02388 FemAB family 8 394 3.6E-137 T 25-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 Gene3D G3DSA:3.40.630.30 297 372 7.1E-36 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 Gene3D G3DSA:3.40.630.30 171 239 7.1E-36 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04480 f05310cb3be55dc9fed3bb65d7cafcc1 404 PANTHER PTHR36174:SF1 1 404 1.2E-118 T 25-04-2016 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 PANTHER PTHR30560:SF3 1 427 1.1E-118 T 25-04-2016 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 PANTHER PTHR30560 1 427 1.1E-118 T 25-04-2016 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 421 7.3E-45 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Hamap MF_00303 Trigger factor [tig]. 1 427 22.409 T 25-04-2016 IPR005215 Trigger factor GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Gene3D G3DSA:1.10.3120.10 218 400 6.9E-60 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 SUPERFAMILY SSF102735 1 127 1.83E-33 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Gene3D G3DSA:3.10.50.40 158 217 2.7E-11 T 25-04-2016 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 SUPERFAMILY SSF54534 89 243 1.51E-36 T 25-04-2016 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 SUPERFAMILY SSF109998 250 427 1.96E-38 T 25-04-2016 IPR027304 Trigger factor/SurA domain APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 TIGRFAM TIGR00115 tig: trigger factor 13 420 5.4E-128 T 25-04-2016 IPR005215 Trigger factor GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 8.0E-39 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 236 3.7E-15 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 Gene3D G3DSA:3.30.70.1050 1 119 3.1E-34 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APQ13_RS07195 01da713a1f13eb045dbcf1bd83363454 427 PIRSF PIRSF003095 1 427 1.1E-122 T 25-04-2016 IPR005215 Trigger factor GO:0015031 APQ13_RS00940 69de92fa0480f963a18bb630b35c8c1b 62 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 3 59 5.0E-14 T 25-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA APQ13_RS00940 69de92fa0480f963a18bb630b35c8c1b 62 Pfam PF11772 DNA-directed RNA polymerase subunit beta 15 61 3.4E-21 T 25-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:3.90.1100.10 405 551 2.6E-147 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:3.90.1100.10 621 675 2.6E-147 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:3.90.1100.10 21 140 2.6E-147 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF04563 RNA polymerase beta subunit 28 460 2.3E-27 T 25-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 220 892 3.7E-295 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:2.40.50.100 677 747 1.2E-26 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 PANTHER PTHR20856:SF20 2 291 0.0 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 PANTHER PTHR20856:SF20 383 1147 0.0 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 289 6.4E-23 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF04561 RNA polymerase Rpb2, domain 2 371 414 6.1E-8 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF00562 RNA polymerase Rpb2, domain 6 679 1065 7.7E-164 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:2.40.50.150 782 914 1.1E-57 T 25-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 618 1.2E-23 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:3.90.1110.10 380 404 2.6E-64 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:3.90.1110.10 142 300 2.6E-64 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1143 12.297 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 538 1.3E-28 T 25-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 SUPERFAMILY SSF64484 382 1151 0.0 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 SUPERFAMILY SSF64484 14 291 0.0 T 25-04-2016 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 PANTHER PTHR20856 2 291 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 PANTHER PTHR20856 383 1147 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:2.30.150.10 552 618 3.8E-26 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 9.7E-26 T 25-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:2.40.270.10 915 1043 1.2E-80 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 Gene3D G3DSA:2.40.270.10 748 775 1.2E-80 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08605 bab870f12c11264844fea1d322193dcb 1187 ProSitePatterns PS01166 RNA polymerases beta chain signature. 918 930 - T 25-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 SMART SM00347 26 126 6.2E-17 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 9.1E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 9.1E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 9.1E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 9.1E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 Gene3D G3DSA:1.10.10.10 2 141 7.6E-36 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 Pfam PF01047 MarR family 34 91 1.8E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 PANTHER PTHR33164 31 141 6.9E-17 T 25-04-2016 APQ13_RS09625 eaa38eed040cb0338175e7d3e9917b47 144 SUPERFAMILY SSF46785 5 142 5.96E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 SUPERFAMILY SSF52794 404 487 4.97E-10 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Gene3D G3DSA:3.40.50.270 405 486 2.7E-8 T 25-04-2016 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 406 462 3.0E-6 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 SUPERFAMILY SSF63520 203 290 7.32E-14 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Gene3D G3DSA:1.10.10.10 5 66 3.6E-10 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Pfam PF05043 Mga helix-turn-helix domain 97 173 9.3E-15 T 25-04-2016 IPR007737 Mga helix-turn-helix domain APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Pfam PF00874 PRD domain 319 394 3.2E-17 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Pfam PF00874 PRD domain 210 287 1.7E-12 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Gene3D G3DSA:1.10.10.10 88 158 3.4E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 519 655 1.5E-10 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 PANTHER PTHR30185:SF5 1 659 1.3E-147 T 25-04-2016 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 SUPERFAMILY SSF63520 297 398 2.62E-17 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Gene3D G3DSA:1.10.1790.10 205 287 8.7E-12 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Gene3D G3DSA:1.10.1790.10 297 398 6.4E-17 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 SUPERFAMILY SSF55804 520 656 1.57E-17 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 PANTHER PTHR30185 1 659 1.3E-147 T 25-04-2016 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Pfam PF08279 HTH domain 6 65 5.1E-16 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 SUPERFAMILY SSF46894 2 67 3.74E-5 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS00595 7854ef044835c764b04e996707e87e99 663 Gene3D G3DSA:3.40.930.10 514 656 8.7E-17 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 SMART SM01103 2 85 5.8E-34 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 5.0E-41 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 1.5E-19 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 95 3.2E-25 T 25-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 SUPERFAMILY SSF75471 1 95 7.85E-27 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 PANTHER PTHR31846 1 90 1.2E-29 T 25-04-2016 APQ13_RS09340 2242e3daca3cd2a3d365b0fed0050c25 102 Gene3D G3DSA:3.30.110.60 1 96 9.6E-30 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 PANTHER PTHR24220:SF587 4 216 1.4E-80 T 25-04-2016 APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 PANTHER PTHR24220 4 216 1.4E-80 T 25-04-2016 APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 Pfam PF00005 ABC transporter 22 165 1.4E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 Gene3D G3DSA:3.40.50.300 3 212 3.5E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 SMART SM00382 30 214 2.4E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02825 387a37acfb6b0a594a00c38ca4f81a33 218 SUPERFAMILY SSF52540 3 214 6.41E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08310 568d7259ea9115ad775b68e9e3eede5a 148 SUPERFAMILY SSF69500 1 144 8.63E-56 T 25-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APQ13_RS08310 568d7259ea9115ad775b68e9e3eede5a 148 Gene3D G3DSA:3.50.80.10 1 144 1.5E-56 T 25-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APQ13_RS08310 568d7259ea9115ad775b68e9e3eede5a 148 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.8E-55 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APQ13_RS08310 568d7259ea9115ad775b68e9e3eede5a 148 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.035 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APQ13_RS08310 568d7259ea9115ad775b68e9e3eede5a 148 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 4.4E-52 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APQ13_RS08310 568d7259ea9115ad775b68e9e3eede5a 148 PANTHER PTHR10472 2 147 3.3E-71 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PANTHER PTHR24322 7 134 7.1E-69 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PANTHER PTHR24322 150 182 7.1E-69 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 Gene3D G3DSA:3.40.50.720 3 251 1.1E-81 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.7E-39 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.7E-39 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.7E-39 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.7E-39 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-39 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.7E-39 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PANTHER PTHR24322:SF347 7 134 7.1E-69 T 25-04-2016 APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PANTHER PTHR24322:SF347 150 182 7.1E-69 T 25-04-2016 APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 7.5E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.5E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.5E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 251 2.4E-59 T 25-04-2016 APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 253 3.0E-105 T 25-04-2016 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 APQ13_RS01755 3fb82355b724a59b7c631f4fb68c46fc 254 SUPERFAMILY SSF51735 3 252 3.01E-80 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01595 198db5d10ec9de8b7479c0b4954e7249 199 SUPERFAMILY SSF53335 28 183 2.46E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS01595 198db5d10ec9de8b7479c0b4954e7249 199 Pfam PF13847 Methyltransferase domain 43 164 1.7E-15 T 25-04-2016 IPR025714 Methyltransferase domain APQ13_RS01595 198db5d10ec9de8b7479c0b4954e7249 199 Gene3D G3DSA:3.40.50.150 32 181 1.0E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS01595 198db5d10ec9de8b7479c0b4954e7249 199 PANTHER PTHR10108 35 181 3.5E-15 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Gene3D G3DSA:3.50.50.60 434 507 8.3E-13 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PIRSF PIRSF000238 2 510 4.9E-242 T 25-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 25-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 SUPERFAMILY SSF52833 104 194 4.97E-20 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 SUPERFAMILY SSF52833 3 101 7.83E-27 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PANTHER PTHR22912 195 506 1.5E-159 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Pfam PF13192 Thioredoxin domain 118 191 7.4E-8 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 482 1.3E-35 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 1.3E-35 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 1.3E-35 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.3E-35 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 1.3E-35 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 489 5.0E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 470 488 3.0E-63 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Gene3D G3DSA:3.40.30.10 102 194 3.2E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Gene3D G3DSA:3.50.50.60 332 433 5.8E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Gene3D G3DSA:3.40.30.10 3 93 1.2E-29 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 3 510 3.3E-221 T 25-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 PANTHER PTHR22912:SF107 195 506 1.5E-159 T 25-04-2016 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 SUPERFAMILY SSF51905 209 508 1.62E-47 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS04290 68cc80ffca662864dc5768b0d26c35c8 510 Gene3D G3DSA:3.50.50.60 209 331 2.8E-22 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 152 16.281 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 Pfam PF01252 Signal peptidase (SPase) II 10 145 1.5E-33 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 PANTHER PTHR33695:SF1 1 151 1.4E-42 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 TIGRFAM TIGR00077 lspA: signal peptidase II 5 148 1.1E-34 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 PANTHER PTHR33695 1 151 1.4E-42 T 25-04-2016 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 ProSitePatterns PS00855 Signal peptidases II signature. 96 108 - T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 8.9E-17 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 8.9E-17 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03870 2c42866eb9a3cba0ce94721865a68476 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 127 143 8.9E-17 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APQ13_RS03145 46b24c06a881f07a610ef82ceef8324a 373 PANTHER PTHR35806 5 373 9.4E-163 T 25-04-2016 APQ13_RS03145 46b24c06a881f07a610ef82ceef8324a 373 PIRSF PIRSF015658 2 373 1.1E-161 T 25-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APQ13_RS03145 46b24c06a881f07a610ef82ceef8324a 373 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 15 372 2.0E-155 T 25-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APQ13_RS03145 46b24c06a881f07a610ef82ceef8324a 373 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 15 366 1.5E-135 T 25-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APQ13_RS06630 f753577389db2bff6a1bd9f608046e6b 471 Pfam PF01458 Uncharacterized protein family (UPF0051) 217 442 6.4E-74 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APQ13_RS06630 f753577389db2bff6a1bd9f608046e6b 471 PANTHER PTHR30508:SF1 16 471 1.6E-231 T 25-04-2016 APQ13_RS06630 f753577389db2bff6a1bd9f608046e6b 471 PANTHER PTHR30508 16 471 1.6E-231 T 25-04-2016 APQ13_RS06630 f753577389db2bff6a1bd9f608046e6b 471 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 16 462 2.7E-219 T 25-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APQ13_RS06630 f753577389db2bff6a1bd9f608046e6b 471 SUPERFAMILY SSF101960 38 468 2.48E-136 T 25-04-2016 APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 PIRSF PIRSF039085 1 245 2.6E-102 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 Pfam PF00005 ABC transporter 19 168 1.9E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 Gene3D G3DSA:3.40.50.300 2 241 4.1E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 PANTHER PTHR24220:SF474 5 253 1.5E-138 T 25-04-2016 APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 PANTHER PTHR24220 5 253 1.5E-138 T 25-04-2016 APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 SMART SM00382 28 216 3.4E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00965 ffbb808e0b12122052c71ba9cfc15622 260 SUPERFAMILY SSF52540 3 239 5.18E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 Gene3D G3DSA:1.10.150.260 2 71 7.8E-29 T 25-04-2016 IPR023089 YozE SAM-like domain APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 PIRSF PIRSF037262 1 71 2.6E-30 T 25-04-2016 IPR010673 Protein of unknown function UPF0346 APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 PANTHER PTHR41284 2 71 5.1E-24 T 25-04-2016 APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 PANTHER PTHR41284:SF1 2 71 5.1E-24 T 25-04-2016 APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 Hamap MF_01538 UPF0346 protein . 1 71 22.293 T 25-04-2016 IPR010673 Protein of unknown function UPF0346 APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 SUPERFAMILY SSF140652 2 71 9.42E-27 T 25-04-2016 IPR023089 YozE SAM-like domain APQ13_RS00500 bad62e46a4485b211094afdf2b22dec5 71 Pfam PF06855 YozE SAM-like fold 4 69 1.1E-23 T 25-04-2016 IPR023089 YozE SAM-like domain APQ13_RS06040 5990d31275638ba0b25f738fa0f42929 247 SUPERFAMILY SSF53335 27 234 1.62E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS06040 5990d31275638ba0b25f738fa0f42929 247 Pfam PF08241 Methyltransferase domain 61 123 8.7E-5 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APQ13_RS06040 5990d31275638ba0b25f738fa0f42929 247 Gene3D G3DSA:3.40.50.150 18 160 1.7E-9 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 Gene3D G3DSA:3.40.50.2020 5 165 1.4E-71 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 SUPERFAMILY SSF53271 8 161 1.19E-52 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 SMART SM01400 10 126 6.0E-73 T 25-04-2016 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 SUPERFAMILY SSF53271 112 309 2.96E-43 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 213 317 1.4E-19 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 1.5E-46 T 25-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 PANTHER PTHR10210 1 323 3.5E-154 T 25-04-2016 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 25-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 1.9E-99 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 PANTHER PTHR10210:SF41 1 323 3.5E-154 T 25-04-2016 APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 Gene3D G3DSA:3.40.50.2020 166 287 3.4E-37 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS03035 ac571e9321a192b6a969c4a9cda77763 326 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 10 318 43.791 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APQ13_RS07880 a2c1022b91856403d7917601426e2153 210 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 207 1.2E-24 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS07880 a2c1022b91856403d7917601426e2153 210 SUPERFAMILY SSF161098 11 197 7.46E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS07880 a2c1022b91856403d7917601426e2153 210 PANTHER PTHR30177:SF7 1 205 1.2E-104 T 25-04-2016 APQ13_RS07880 a2c1022b91856403d7917601426e2153 210 Gene3D G3DSA:1.10.3720.10 7 195 1.1E-29 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS07880 a2c1022b91856403d7917601426e2153 210 PANTHER PTHR30177 1 205 1.2E-104 T 25-04-2016 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PIRSF PIRSF000102 4 324 4.0E-105 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 Gene3D G3DSA:3.90.110.10 150 316 3.3E-62 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PRINTS PR00086 L-lactate dehydrogenase signature 122 142 2.6E-44 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PRINTS PR00086 L-lactate dehydrogenase signature 36 60 2.6E-44 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PRINTS PR00086 L-lactate dehydrogenase signature 146 164 2.6E-44 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PRINTS PR00086 L-lactate dehydrogenase signature 9 33 2.6E-44 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PRINTS PR00086 L-lactate dehydrogenase signature 176 189 2.6E-44 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 9 148 3.3E-45 T 25-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PANTHER PTHR11540:SF3 4 327 2.6E-151 T 25-04-2016 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 7 317 45.187 T 25-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 SUPERFAMILY SSF51735 4 150 8.86E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 12 310 4.8E-123 T 25-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 Gene3D G3DSA:3.40.50.720 3 149 1.3E-49 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 178 184 - T 25-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 PANTHER PTHR11540 4 327 2.6E-151 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 SUPERFAMILY SSF56327 149 316 5.19E-57 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APQ13_RS02735 608f6e41537a909331a49aa5481ebf9d 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 318 8.6E-43 T 25-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 Pfam PF00072 Response regulator receiver domain 7 114 1.7E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 SUPERFAMILY SSF46894 146 222 2.15E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 SMART SM00862 148 222 2.0E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 SMART SM00448 5 114 2.6E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 PANTHER PTHR26402 5 220 2.4E-79 T 25-04-2016 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 Gene3D G3DSA:3.40.50.2300 3 129 1.4E-31 T 25-04-2016 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 2.6E-22 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 Gene3D G3DSA:1.10.10.10 147 222 3.9E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 SUPERFAMILY SSF52172 3 134 1.11E-30 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS03185 a391b0fb4e3329494167bb910de6cd68 223 PANTHER PTHR26402:SF519 5 220 2.4E-79 T 25-04-2016 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 Gene3D G3DSA:1.20.1560.10 5 318 1.8E-69 T 25-04-2016 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 Gene3D G3DSA:3.40.50.300 343 563 8.7E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 SUPERFAMILY SSF90123 5 324 3.53E-74 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 PANTHER PTHR24221:SF202 1 580 5.1E-213 T 25-04-2016 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 SUPERFAMILY SSF52540 327 571 8.78E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 Pfam PF00664 ABC transporter transmembrane region 20 291 3.7E-39 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 SMART SM00382 360 546 9.0E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 PANTHER PTHR24221 1 580 5.1E-213 T 25-04-2016 APQ13_RS05335 402362be2f4ba95d9bae39f582845d86 581 Pfam PF00005 ABC transporter 351 498 4.0E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 274 5.6E-72 T 25-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 Pfam PF02540 NAD synthase 23 265 1.0E-65 T 25-04-2016 IPR022310 NAD/GMP synthase APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 PANTHER PTHR23090:SF7 1 274 7.7E-159 T 25-04-2016 APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 PANTHER PTHR23090 1 274 7.7E-159 T 25-04-2016 APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 SUPERFAMILY SSF52402 4 273 5.67E-80 T 25-04-2016 APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 Gene3D G3DSA:3.40.50.620 4 268 2.0E-65 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS05645 53270a3e24b5f0f124323a0a6774429e 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 30.459 T 25-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 124 1.2E-39 T 25-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 SUPERFAMILY SSF52540 79 167 1.27E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 SUPERFAMILY SSF52540 202 370 1.27E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 SUPERFAMILY SSF116878 126 225 5.36E-48 T 25-04-2016 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 SUPERFAMILY SSF116878 380 455 5.36E-48 T 25-04-2016 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Gene3D G3DSA:3.40.50.300 223 251 9.5E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Gene3D G3DSA:3.30.1360.120 2 125 5.0E-47 T 25-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Gene3D G3DSA:3.40.50.300 291 385 9.9E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Pfam PF01926 50S ribosome-binding GTPase 225 336 3.7E-26 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 455 33.933 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 PANTHER PTHR11649 10 455 2.9E-158 T 25-04-2016 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 PANTHER PTHR11649:SF56 10 455 2.9E-158 T 25-04-2016 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 346 6.3E-26 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Gene3D G3DSA:1.20.120.430 386 455 1.4E-54 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Gene3D G3DSA:1.20.120.430 126 186 1.4E-54 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Gene3D G3DSA:1.20.120.430 252 276 1.4E-54 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 455 1.6E-128 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APQ13_RS02195 e9bd0c2f0cd48aac61941e91757944c4 455 Pfam PF12631 MnmE helical domain 127 452 4.1E-56 T 25-04-2016 IPR025867 MnmE, helical domain APQ13_RS02020 f2bacc2854fa2842fc0c01d04447a08b 113 SUPERFAMILY SSF141734 4 107 2.35E-49 T 25-04-2016 APQ13_RS02020 f2bacc2854fa2842fc0c01d04447a08b 113 PANTHER PTHR21256 4 109 4.6E-59 T 25-04-2016 APQ13_RS02020 f2bacc2854fa2842fc0c01d04447a08b 113 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 31.334 T 25-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APQ13_RS02020 f2bacc2854fa2842fc0c01d04447a08b 113 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 105 1.0E-26 T 25-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APQ13_RS02020 f2bacc2854fa2842fc0c01d04447a08b 113 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 102 3.9E-36 T 25-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 557 571 6.5E-27 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 6.5E-27 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 449 467 6.5E-27 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 524 542 6.5E-27 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 611 682 3.0E-20 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Gene3D G3DSA:3.40.50.300 401 621 7.0E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Gene3D G3DSA:3.40.50.300 77 260 1.4E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 SUPERFAMILY SSF52540 394 680 1.24E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 SMART SM00382 445 588 6.3E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 SMART SM00382 114 260 6.2E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 PANTHER PTHR11638:SF101 76 700 0.0 T 25-04-2016 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Gene3D G3DSA:1.10.8.60 622 699 3.9E-25 T 25-04-2016 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Gene3D G3DSA:1.10.8.60 262 342 1.0E-24 T 25-04-2016 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 PANTHER PTHR11638 76 700 0.0 T 25-04-2016 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 119 251 1.7E-14 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 SUPERFAMILY SSF52540 77 370 3.55E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 479 497 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 SMART SM01086 611 698 1.2E-25 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS03420 8c42dff0c595311753ae89fd9b3aed4f 701 Pfam PF07724 AAA domain (Cdc48 subfamily) 444 604 5.1E-42 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS06295 2bd2ac483ef9ba4532ed99db82261362 306 Pfam PF00483 Nucleotidyl transferase 8 268 5.5E-33 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APQ13_RS06295 2bd2ac483ef9ba4532ed99db82261362 306 SUPERFAMILY SSF53448 3 274 8.34E-65 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS06295 2bd2ac483ef9ba4532ed99db82261362 306 PANTHER PTHR22572:SF14 8 291 1.1E-109 T 25-04-2016 APQ13_RS06295 2bd2ac483ef9ba4532ed99db82261362 306 Gene3D G3DSA:3.90.550.10 7 280 9.8E-70 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS06295 2bd2ac483ef9ba4532ed99db82261362 306 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 270 6.0E-110 T 25-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APQ13_RS06295 2bd2ac483ef9ba4532ed99db82261362 306 PANTHER PTHR22572 8 291 1.1E-109 T 25-04-2016 APQ13_RS07830 5a05223a59196cdf37a71df39699297d 113 Pfam PF01883 Domain of unknown function DUF59 17 89 1.0E-10 T 25-04-2016 IPR002744 Domain of unknown function DUF59 APQ13_RS07830 5a05223a59196cdf37a71df39699297d 113 SUPERFAMILY SSF117916 16 109 8.5E-25 T 25-04-2016 APQ13_RS02285 1b6842500642c9780bee330bb1b8ba2e 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.9E-30 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS02285 1b6842500642c9780bee330bb1b8ba2e 217 Gene3D G3DSA:1.10.3720.10 15 214 5.4E-46 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02285 1b6842500642c9780bee330bb1b8ba2e 217 PANTHER PTHR30614 3 217 1.7E-81 T 25-04-2016 APQ13_RS02285 1b6842500642c9780bee330bb1b8ba2e 217 SUPERFAMILY SSF161098 14 203 4.97E-42 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02285 1b6842500642c9780bee330bb1b8ba2e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 5.6E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02285 1b6842500642c9780bee330bb1b8ba2e 217 PANTHER PTHR30614:SF18 3 217 1.7E-81 T 25-04-2016 APQ13_RS03900 7f8c4e4e389d6ac4b9957691a3d1cf66 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 104 24.513 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03900 7f8c4e4e389d6ac4b9957691a3d1cf66 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 4 102 3.6E-35 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APQ13_RS03900 7f8c4e4e389d6ac4b9957691a3d1cf66 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 5.2E-34 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03900 7f8c4e4e389d6ac4b9957691a3d1cf66 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 25-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03900 7f8c4e4e389d6ac4b9957691a3d1cf66 104 PANTHER PTHR21349 4 102 7.5E-37 T 25-04-2016 APQ13_RS03900 7f8c4e4e389d6ac4b9957691a3d1cf66 104 SUPERFAMILY SSF141091 4 103 4.19E-35 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 SUPERFAMILY SSF46946 132 221 8.64E-28 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 SUPERFAMILY SSF81624 2 141 6.8E-39 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 42.706 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 PANTHER PTHR22993:SF15 1 273 7.7E-114 T 25-04-2016 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 Pfam PF06827 Zinc finger found in FPG and IleRS 245 272 1.9E-11 T 25-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 9.6E-114 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 1.0E-32 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 25-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 Gene3D G3DSA:1.10.8.50 132 272 4.4E-48 T 25-04-2016 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 SMART SM00898 2 116 6.4E-48 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 3.9E-32 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 Gene3D G3DSA:3.20.190.10 2 125 2.2E-36 T 25-04-2016 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 PANTHER PTHR22993 1 273 7.7E-114 T 25-04-2016 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 SMART SM01232 132 224 9.8E-41 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APQ13_RS00535 f092d77ae0eb6a9b8de51f7654812e72 273 SUPERFAMILY SSF57716 220 272 8.91E-17 T 25-04-2016 APQ13_RS04520 8bb7a5c4c899d9b0dee75484ed10a640 282 SUPERFAMILY SSF51445 69 269 1.26E-37 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS04520 8bb7a5c4c899d9b0dee75484ed10a640 282 PANTHER PTHR34135:SF2 67 274 2.0E-46 T 25-04-2016 APQ13_RS04520 8bb7a5c4c899d9b0dee75484ed10a640 282 Gene3D G3DSA:3.20.20.80 67 261 2.7E-38 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS04520 8bb7a5c4c899d9b0dee75484ed10a640 282 Pfam PF01183 Glycosyl hydrolases family 25 69 253 2.0E-16 T 25-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 APQ13_RS04520 8bb7a5c4c899d9b0dee75484ed10a640 282 PANTHER PTHR34135 67 274 2.0E-46 T 25-04-2016 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 3.3E-14 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 SUPERFAMILY SSF50249 2 104 2.36E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 561 33.32 T 25-04-2016 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Pfam PF02938 GAD domain 313 403 1.0E-11 T 25-04-2016 IPR029351 GAD domain APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PANTHER PTHR22594:SF5 1 298 7.3E-223 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PANTHER PTHR22594:SF5 367 569 7.3E-223 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 SUPERFAMILY SSF55261 290 417 1.81E-23 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 555 3.7E-105 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Gene3D G3DSA:3.30.1360.30 278 411 6.1E-33 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Gene3D G3DSA:2.40.50.140 6 105 5.9E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 579 1.7E-215 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Gene3D G3DSA:3.30.930.10 132 277 6.7E-106 T 25-04-2016 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 Gene3D G3DSA:3.30.930.10 412 581 6.7E-106 T 25-04-2016 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 SUPERFAMILY SSF55681 422 581 4.98E-98 T 25-04-2016 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 SUPERFAMILY SSF55681 114 293 4.98E-98 T 25-04-2016 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PANTHER PTHR22594 1 298 7.3E-223 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PANTHER PTHR22594 367 569 7.3E-223 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 1.78E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.78E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 1.78E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09285 ca2da64960161ec429b069a66e76c429 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 1.78E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 PANTHER PTHR11808 1 364 3.6E-161 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 363 2.7E-122 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 Gene3D G3DSA:3.90.1150.10 247 363 2.0E-34 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 PIRSF PIRSF001434 1 364 9.5E-116 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 PANTHER PTHR11808:SF15 1 364 3.6E-161 T 25-04-2016 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 Gene3D G3DSA:3.40.640.10 6 245 8.1E-80 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS00245 fa486f48be51e79915d6d8fb4773c72e 364 SUPERFAMILY SSF53383 8 363 8.43E-95 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 PANTHER PTHR31238 162 378 2.3E-70 T 25-04-2016 APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 SUPERFAMILY SSF51182 15 375 1.24E-93 T 25-04-2016 IPR011051 RmlC-like cupin domain APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 Pfam PF00190 Cupin 236 366 2.6E-22 T 25-04-2016 IPR006045 Cupin 1 GO:0045735 APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 Pfam PF00190 Cupin 55 190 1.0E-15 T 25-04-2016 IPR006045 Cupin 1 GO:0045735 APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 SMART SM00835 229 370 9.1E-31 T 25-04-2016 IPR006045 Cupin 1 GO:0045735 APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 SMART SM00835 54 193 1.1E-10 T 25-04-2016 IPR006045 Cupin 1 GO:0045735 APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 Gene3D G3DSA:2.60.120.10 227 376 5.7E-56 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 Gene3D G3DSA:2.60.120.10 9 205 1.1E-54 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 14 376 2.7E-175 T 25-04-2016 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 APQ13_RS07035 3059031fb1332dd20ae531e4fe4802bc 394 PANTHER PTHR31238:SF32 162 378 2.3E-70 T 25-04-2016 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 PANTHER PTHR10277:SF9 2 509 5.8E-216 T 25-04-2016 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 25-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 Gene3D G3DSA:3.20.20.70 2 344 5.6E-135 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 496 4.2E-186 T 25-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 496 3.1E-28 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 PANTHER PTHR10277 2 509 5.8E-216 T 25-04-2016 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 SUPERFAMILY SSF110921 394 496 1.44E-14 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 510 38.686 T 25-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 Pfam PF00682 HMGL-like 3 271 1.1E-94 T 25-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 SUPERFAMILY SSF51569 2 290 6.23E-93 T 25-04-2016 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 SMART SM00917 368 501 3.0E-27 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS01535 3e4086d77bdecef3c74e2705624f947b 521 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 25-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APQ13_RS02770 5ba5617365c9ac9b19bddfce329453b3 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 203 1.6E-20 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS02770 5ba5617365c9ac9b19bddfce329453b3 213 SUPERFAMILY SSF52266 19 210 8.7E-45 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS02770 5ba5617365c9ac9b19bddfce329453b3 213 Gene3D G3DSA:3.40.50.1110 21 210 1.8E-46 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS02770 5ba5617365c9ac9b19bddfce329453b3 213 PANTHER PTHR30383 41 209 5.5E-17 T 25-04-2016 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 Gene3D G3DSA:3.40.640.10 37 284 8.5E-105 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.611 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 25-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 SUPERFAMILY SSF53383 4 416 9.96E-172 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 Gene3D G3DSA:3.90.1150.10 285 418 1.4E-47 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 Pfam PF00464 Serine hydroxymethyltransferase 9 386 4.2E-168 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 PIRSF PIRSF000412 1 420 8.1E-162 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APQ13_RS02885 adbc0dde3f637e2aecd4581bd8c29058 420 PANTHER PTHR11680 9 416 7.1E-234 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 SUPERFAMILY SSF63411 7 159 2.38E-60 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 146 2.0E-76 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PIRSF PIRSF006160 4 160 8.9E-63 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 52 70 2.8E-33 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 76 94 2.8E-33 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 31 49 2.8E-33 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 8 26 2.8E-33 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 120 139 2.8E-33 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 PANTHER PTHR35799 5 160 2.5E-84 T 25-04-2016 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 4 158 34.974 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 Gene3D G3DSA:3.30.1360.80 6 159 1.6E-65 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS05600 0e85595a1bc374fdc44e4d30801213da 160 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 7 151 1.3E-52 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Gene3D G3DSA:3.30.930.10 1 228 2.0E-88 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Gene3D G3DSA:3.30.930.10 441 495 2.0E-88 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 616 37.854 T 25-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 493 4.8E-58 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PANTHER PTHR11451 433 616 3.7E-127 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PANTHER PTHR11451 255 282 3.7E-127 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PANTHER PTHR11451 4 216 3.7E-127 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Gene3D G3DSA:3.40.50.800 514 615 2.9E-22 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 214 1.2E-98 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Pfam PF04073 Aminoacyl-tRNA editing domain 295 412 3.9E-28 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 SUPERFAMILY SSF55681 9 229 2.11E-84 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 SUPERFAMILY SSF55681 441 524 2.11E-84 T 25-04-2016 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 SUPERFAMILY SSF55826 256 422 2.09E-34 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Gene3D G3DSA:3.90.960.10 292 422 1.4E-33 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 Pfam PF03129 Anticodon binding domain 523 611 1.4E-13 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PANTHER PTHR11451:SF3 433 616 3.7E-127 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PANTHER PTHR11451:SF3 255 282 3.7E-127 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PANTHER PTHR11451:SF3 4 216 3.7E-127 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 9.3E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 9.3E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 9.3E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 9.3E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APQ13_RS09415 bdc6da6bdb6e52f562e745b4d94418cc 616 SUPERFAMILY SSF52954 511 614 8.67E-23 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 PIRSF PIRSF006092 1 160 1.4E-46 T 25-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 SUPERFAMILY SSF46557 4 78 1.14E-24 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 Gene3D G3DSA:3.10.50.30 78 157 7.2E-27 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 2.0E-24 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 31.373 T 25-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 157 4.9E-54 T 25-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 Gene3D G3DSA:1.10.287.180 4 77 1.8E-29 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 1.2E-26 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 PANTHER PTHR30437 1 157 1.3E-57 T 25-04-2016 APQ13_RS00010 ef7b97695d83bece0c00e48d25217720 160 SUPERFAMILY SSF54534 83 156 2.51E-19 T 25-04-2016 APQ13_RS00125 3a1c3121a6ab73183f504d41455d025a 190 PANTHER PTHR38438:SF1 1 190 2.7E-45 T 25-04-2016 APQ13_RS00125 3a1c3121a6ab73183f504d41455d025a 190 Pfam PF12822 Protein of unknown function (DUF3816) 6 175 2.0E-27 T 25-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 APQ13_RS00125 3a1c3121a6ab73183f504d41455d025a 190 PANTHER PTHR38438 1 190 2.7E-45 T 25-04-2016 APQ13_RS00125 3a1c3121a6ab73183f504d41455d025a 190 PIRSF PIRSF037778 1 187 2.5E-56 T 25-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 Gene3D G3DSA:3.40.5.10 1 52 3.1E-21 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 1.7E-25 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 SUPERFAMILY SSF55658 1 56 1.53E-15 T 25-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.3E-40 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 SUPERFAMILY SSF55653 57 149 4.84E-24 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 Gene3D G3DSA:3.10.430.100 61 149 2.5E-26 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 23.553 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 PANTHER PTHR21368 1 149 1.3E-36 T 25-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07795 d19a2f0b526dd92d055c6f0a11d5896f 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.4E-20 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Pfam PF05043 Mga helix-turn-helix domain 88 163 8.6E-10 T 25-04-2016 IPR007737 Mga helix-turn-helix domain APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 486 614 5.0E-19 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Gene3D G3DSA:1.10.10.10 80 132 3.4E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Gene3D G3DSA:1.10.1790.10 277 373 3.1E-15 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 SUPERFAMILY SSF63520 276 369 2.75E-16 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 PANTHER PTHR30185:SF4 3 620 6.2E-47 T 25-04-2016 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Pfam PF00874 PRD domain 283 369 6.8E-16 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 SUPERFAMILY SSF55804 485 613 1.62E-23 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Gene3D G3DSA:3.40.930.10 486 617 5.0E-27 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 PANTHER PTHR30185 3 620 6.2E-47 T 25-04-2016 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 Gene3D G3DSA:3.40.50.270 384 462 7.9E-6 T 25-04-2016 APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 SUPERFAMILY SSF46785 87 131 4.57E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06345 99e611472d763f80197c36029bafe4fe 621 SUPERFAMILY SSF52794 382 466 4.24E-9 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 1.0E-55 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 Gene3D G3DSA:3.20.20.70 3 250 1.4E-100 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 25-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 SUPERFAMILY SSF51351 1 250 7.85E-90 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 Pfam PF00121 Triosephosphate isomerase 6 247 3.2E-91 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 PANTHER PTHR21139 1 251 3.0E-114 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APQ13_RS04490 ce4cf696bd32470a83c42b6c91d01cbc 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 38.917 T 25-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APQ13_RS01395 d61ce21a738a138c66f80b1d6bb21f3f 205 SUPERFAMILY SSF55811 61 198 8.67E-25 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS01395 d61ce21a738a138c66f80b1d6bb21f3f 205 PANTHER PTHR22769:SF32 14 205 5.0E-41 T 25-04-2016 APQ13_RS01395 d61ce21a738a138c66f80b1d6bb21f3f 205 PANTHER PTHR22769 14 205 5.0E-41 T 25-04-2016 APQ13_RS01395 d61ce21a738a138c66f80b1d6bb21f3f 205 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 4 59 3.8E-26 T 25-04-2016 APQ13_RS01395 d61ce21a738a138c66f80b1d6bb21f3f 205 Gene3D G3DSA:3.90.79.10 56 193 1.4E-21 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS01395 d61ce21a738a138c66f80b1d6bb21f3f 205 Pfam PF00293 NUDIX domain 75 171 1.9E-7 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS02030 5246801f3c7c97eade1468460d07b7ba 59 Pfam PF05103 DivIVA protein 2 54 1.4E-6 T 25-04-2016 IPR007793 DivIVA family APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 SUPERFAMILY SSF52540 19 254 2.0E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 SMART SM00382 45 239 1.8E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 PANTHER PTHR24220 22 265 1.3E-134 T 25-04-2016 APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 267 3.3E-123 T 25-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 PANTHER PTHR24220:SF506 22 265 1.3E-134 T 25-04-2016 APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 Gene3D G3DSA:3.40.50.300 20 258 3.3E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02640 becbad03228cc26e459d0a14e0cdf766 267 Pfam PF00005 ABC transporter 37 191 1.0E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 Pfam PF16199 Radical_SAM C-terminal domain 213 296 5.4E-27 T 25-04-2016 IPR032432 Radical SAM, C-terminal extension APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 SMART SM00729 21 252 1.9E-28 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 Gene3D G3DSA:3.80.30.20 21 254 1.7E-27 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 SUPERFAMILY SSF102114 9 301 1.96E-44 T 25-04-2016 APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 PANTHER PTHR11135:SF1 1 303 1.2E-148 T 25-04-2016 IPR005911 Protein YhcC-like GO:0051536 APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 Pfam PF04055 Radical SAM superfamily 41 204 9.0E-13 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 PANTHER PTHR11135 1 303 1.2E-148 T 25-04-2016 APQ13_RS00145 80bb73708640efa7d8e7c3ad972447c7 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 4 307 1.1E-103 T 25-04-2016 IPR005911 Protein YhcC-like GO:0051536 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 Pfam PF01926 50S ribosome-binding GTPase 162 285 1.3E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PIRSF PIRSF002401 1 384 1.4E-136 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 1.5E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 227 1.5E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 1.5E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 247 1.5E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 Pfam PF09269 Domain of unknown function (DUF1967) 366 434 2.2E-24 T 25-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 337 1.3E-137 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PANTHER PTHR11702 4 374 5.5E-163 T 25-04-2016 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 162 331 5.8E-12 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 Gene3D G3DSA:2.70.210.12 3 157 2.7E-56 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 PANTHER PTHR11702:SF3 4 374 5.5E-163 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 Gene3D G3DSA:3.40.50.300 161 342 1.3E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 SUPERFAMILY SSF102741 364 436 3.4E-23 T 25-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 Pfam PF01018 GTP1/OBG 4 159 1.4E-59 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 366 435 1.9E-25 T 25-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 SUPERFAMILY SSF52540 152 339 3.88E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 ProSitePatterns PS00905 GTP1/OBG family signature. 214 227 - T 25-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 SUPERFAMILY SSF82051 3 159 1.96E-53 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APQ13_RS04105 adc9c85f8f6da7743f9b9aed47d9b70d 436 Hamap MF_01454 GTPase Obg [obg]. 3 338 46.221 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 SUPERFAMILY SSF53955 99 322 9.84E-55 T 25-04-2016 IPR023346 Lysozyme-like domain APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 PANTHER PTHR32282 31 740 1.3E-175 T 25-04-2016 APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 Gene3D G3DSA:3.40.710.10 358 741 3.7E-85 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 Gene3D G3DSA:1.10.3810.10 119 312 3.5E-55 T 25-04-2016 APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 PANTHER PTHR32282:SF5 31 740 1.3E-175 T 25-04-2016 APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 Pfam PF00912 Transglycosylase 110 282 1.3E-49 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 Pfam PF00905 Penicillin binding protein transpeptidase domain 420 654 4.5E-19 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 SUPERFAMILY SSF56601 281 301 2.21E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS08600 c32019fcdd0651fd1628b7f7ab55e9c2 784 SUPERFAMILY SSF56601 355 766 2.21E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 Gene3D G3DSA:3.30.70.360 286 370 1.3E-36 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 SUPERFAMILY SSF53187 2 188 2.46E-66 T 25-04-2016 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 SUPERFAMILY SSF53187 387 469 2.46E-66 T 25-04-2016 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 155 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 Gene3D G3DSA:3.40.630.10 4 188 1.2E-67 T 25-04-2016 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 Gene3D G3DSA:3.40.630.10 386 469 1.2E-67 T 25-04-2016 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 15 465 8.1E-175 T 25-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 SUPERFAMILY SSF55031 188 369 1.05E-50 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 Gene3D G3DSA:3.30.70.360 206 285 1.8E-28 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 TIGRFAM TIGR01886 dipeptidase: dipeptidase PepV 3 470 1.4E-218 T 25-04-2016 IPR011291 Peptidase M20A, peptidase V KEGG: 00480+3.4.13.- APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 PANTHER PTHR11014 1 192 6.9E-57 T 25-04-2016 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 PANTHER PTHR11014 260 470 6.9E-57 T 25-04-2016 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 Pfam PF01546 Peptidase family M20/M25/M40 86 466 4.8E-30 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APQ13_RS02170 63c642e44275b751e2af455fa22f6bcc 470 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 82 91 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 SUPERFAMILY SSF46894 253 313 1.77E-16 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 Pfam PF00196 Bacterial regulatory proteins, luxR family 259 308 6.9E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 259 273 2.2E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 273 289 2.2E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 289 301 2.2E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 SMART SM00421 256 313 9.1E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS06585 a829a06d945cc742205641b8b9996461 321 Gene3D G3DSA:1.10.10.10 256 313 9.3E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031 198 211 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031 283 580 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031 603 646 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031 253 266 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 SMART SM00490 315 385 0.48 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 SMART SM00490 486 567 1.8E-22 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 SMART SM00487 249 437 1.7E-29 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 642 6.3E-243 T 25-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Pfam PF17191 RecG wedge domain 10 157 1.3E-14 T 25-04-2016 IPR033454 RecG, wedge domain APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 SUPERFAMILY SSF52540 371 580 1.94E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Gene3D G3DSA:3.40.50.300 433 614 1.6E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Pfam PF00270 DEAD/DEAH box helicase 254 409 3.4E-16 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Pfam PF00271 Helicase conserved C-terminal domain 450 566 9.3E-23 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 SUPERFAMILY SSF50249 1 161 1.28E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Gene3D G3DSA:1.10.150.20 7 33 7.1E-4 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Gene3D G3DSA:3.40.50.300 247 432 3.9E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031:SF249 198 211 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031:SF249 283 580 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031:SF249 603 646 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 PANTHER PTHR24031:SF249 253 266 8.2E-123 T 25-04-2016 APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 SUPERFAMILY SSF52540 169 430 1.16E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09240 4304d4a93c2e7f1160c53b488454d5ef 671 Gene3D G3DSA:2.40.50.140 44 120 2.3E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PANTHER PTHR22912 1 450 1.7E-237 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PANTHER PTHR22912:SF106 1 450 1.7E-237 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 2.9E-67 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.0E-33 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PIRSF PIRSF000350 1 446 1.8E-74 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 SUPERFAMILY SSF51905 1 361 2.81E-56 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 2.9E-63 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 Gene3D G3DSA:3.50.50.60 248 329 3.1E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 Gene3D G3DSA:3.50.50.60 2 143 1.2E-43 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 Gene3D G3DSA:3.50.50.60 145 247 7.4E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 SUPERFAMILY SSF55424 336 450 1.15E-33 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.2E-26 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.2E-26 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.2E-26 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.2E-26 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.2E-26 T 25-04-2016 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 Gene3D G3DSA:3.30.390.30 330 450 1.3E-39 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APQ13_RS03940 f7b0709765d79fa27ab4da4ff65f88fb 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.7E-213 T 25-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 APQ13_RS01575 a3e1443a3893519f43ee0d2ae99e1429 60 Gene3D G3DSA:1.10.10.60 12 55 9.6E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01575 a3e1443a3893519f43ee0d2ae99e1429 60 Pfam PF13518 Helix-turn-helix domain 11 56 9.9E-9 T 25-04-2016 APQ13_RS01575 a3e1443a3893519f43ee0d2ae99e1429 60 SUPERFAMILY SSF48295 1 59 1.05E-11 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 518 622 5.1E-23 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 SUPERFAMILY SSF53850 1 246 1.12E-59 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:3.40.190.10 207 248 6.7E-35 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:3.40.190.10 275 351 1.1E-40 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:3.40.190.10 453 493 1.1E-40 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:3.40.190.10 25 113 6.7E-35 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 247 3.9E-57 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 276 493 2.2E-56 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 SUPERFAMILY SSF53850 274 494 7.98E-62 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 PANTHER PTHR30614 273 728 3.7E-234 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 SUPERFAMILY SSF161098 520 721 6.15E-44 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 SMART SM00079 27 248 9.9E-5 T 25-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 PANTHER PTHR30614:SF0 273 728 3.7E-234 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:3.40.190.10 114 206 1.3E-25 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:1.10.3720.10 513 727 4.7E-67 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Gene3D G3DSA:3.40.190.10 352 451 2.3E-25 T 25-04-2016 APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 SMART SM00062 274 495 1.0E-49 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 SMART SM00062 27 249 7.1E-52 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04085 037a1a84d15661e5306ce954bfe1c9e8 728 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 542 728 1.4E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 Pfam PF00271 Helicase conserved C-terminal domain 229 337 1.0E-25 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 1 435 50.325 T 25-04-2016 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 Gene3D G3DSA:3.40.50.300 3 210 9.9E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 SUPERFAMILY SSF52540 70 357 5.53E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 PANTHER PTHR24031 1 440 2.4E-203 T 25-04-2016 APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 SMART SM00487 20 220 1.5E-47 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 Gene3D G3DSA:3.40.50.300 217 359 3.2E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 Pfam PF00270 DEAD/DEAH box helicase 25 191 1.1E-42 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 SMART SM00490 256 337 2.0E-26 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS05680 1e065ebc50f5e0e1e42749d802cd4625 449 PANTHER PTHR24031:SF280 1 440 2.4E-203 T 25-04-2016 APQ13_RS08955 0f94ea3888b530df46f5d5addeebbb0f 76 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 68 2.0E-9 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 APQ13_RS00950 48e19ec64f020ff9c7da62ce855c66f4 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 102 8.3E-23 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS00950 48e19ec64f020ff9c7da62ce855c66f4 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 1.8E-20 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00950 48e19ec64f020ff9c7da62ce855c66f4 216 Gene3D G3DSA:1.10.3720.10 12 212 3.2E-46 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00950 48e19ec64f020ff9c7da62ce855c66f4 216 SUPERFAMILY SSF161098 12 203 1.14E-39 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00950 48e19ec64f020ff9c7da62ce855c66f4 216 PANTHER PTHR30614 9 216 4.0E-68 T 25-04-2016 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 SUPERFAMILY SSF55252 91 152 2.35E-11 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.77E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 PRINTS PR01467 Bacterial arginine repressor signature 91 104 8.77E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 PRINTS PR01467 Bacterial arginine repressor signature 21 34 8.77E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 PRINTS PR01467 Bacterial arginine repressor signature 37 52 8.77E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 Pfam PF01316 Arginine repressor, DNA binding domain 1 67 1.6E-24 T 25-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 Hamap MF_00173 Arginine repressor [argR]. 1 154 43.093 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 PANTHER PTHR34471 1 154 6.0E-35 T 25-04-2016 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 Gene3D G3DSA:1.10.10.10 9 66 6.6E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 Gene3D G3DSA:3.30.1360.40 93 152 4.4E-7 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 PANTHER PTHR34471:SF1 1 154 6.0E-35 T 25-04-2016 APQ13_RS05070 01ddb55c7494cba67520f16c1734e71f 154 SUPERFAMILY SSF46785 1 68 3.9E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02720 f14bc372444a0c1c3335a217bab5c07d 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 297 1.1E-38 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APQ13_RS02720 f14bc372444a0c1c3335a217bab5c07d 318 PANTHER PTHR32196 9 318 6.8E-116 T 25-04-2016 APQ13_RS02720 f14bc372444a0c1c3335a217bab5c07d 318 PANTHER PTHR32196:SF40 9 318 6.8E-116 T 25-04-2016 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 Pfam PF13377 Periplasmic binding protein-like domain 167 320 7.2E-19 T 25-04-2016 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 SUPERFAMILY SSF53822 61 314 5.8E-63 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.4E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.4E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 4.7E-19 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 Gene3D G3DSA:3.40.50.2300 170 302 1.2E-26 T 25-04-2016 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 PANTHER PTHR30146 2 319 4.7E-99 T 25-04-2016 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 SUPERFAMILY SSF47413 3 57 1.45E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 Gene3D G3DSA:1.10.260.40 4 54 1.8E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 PANTHER PTHR30146:SF31 2 319 4.7E-99 T 25-04-2016 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 Gene3D G3DSA:3.40.50.2300 55 169 8.1E-41 T 25-04-2016 APQ13_RS09195 3290228581f3ded46603a65c7dbe2a87 320 SMART SM00354 2 72 1.7E-36 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 ProSitePatterns PS00674 AAA-protein family signature. 325 343 - T 25-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 Pfam PF01434 Peptidase family M41 417 622 1.7E-78 T 25-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 PANTHER PTHR23076 1 656 4.3E-298 T 25-04-2016 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 PANTHER PTHR23076:SF10 1 656 4.3E-298 T 25-04-2016 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 SMART SM00382 218 357 3.2E-23 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 636 36.505 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 SUPERFAMILY SSF140990 437 631 4.32E-69 T 25-04-2016 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 Gene3D G3DSA:3.40.50.300 182 364 4.7E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 354 3.2E-44 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 Gene3D G3DSA:1.10.8.60 365 429 5.4E-26 T 25-04-2016 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 SUPERFAMILY SSF52540 181 425 9.3E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 Pfam PF06480 FtsH Extracellular 14 126 4.6E-10 T 25-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 APQ13_RS07600 7f13e800329da1494ad580095d52be06 656 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 134 623 2.2E-223 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 Gene3D G3DSA:3.40.1360.20 5 126 7.5E-38 T 25-04-2016 APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 PANTHER PTHR39156 4 190 4.0E-77 T 25-04-2016 APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 SUPERFAMILY SSF110455 5 125 2.41E-34 T 25-04-2016 APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 Pfam PF13331 Domain of unknown function (DUF4093) 99 184 4.4E-31 T 25-04-2016 IPR025156 Ribonuclease M5, C-terminal domain APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 6 182 2.9E-46 T 25-04-2016 IPR004466 Ribonuclease M5 GO:0043822 APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 Hamap MF_01469 Ribonuclease M5 [rnmV]. 7 187 30.835 T 25-04-2016 IPR004466 Ribonuclease M5 GO:0043822 APQ13_RS06200 2e359f1a80d7860cf18ff1f21f032bf1 190 Pfam PF13662 Toprim domain 9 73 2.5E-5 T 25-04-2016 IPR006171 Toprim domain APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 PANTHER PTHR18895 17 312 8.3E-90 T 25-04-2016 APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 PIRSF PIRSF000401 2 309 8.7E-110 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 SUPERFAMILY SSF53335 91 306 1.32E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 300 2.6E-74 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 Gene3D G3DSA:3.40.50.150 110 301 6.6E-45 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 PANTHER PTHR18895:SF3 17 312 8.3E-90 T 25-04-2016 APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 307 6.4E-112 T 25-04-2016 APQ13_RS08275 30bf2423dc3c469a7c0e4c81ddf48e76 317 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 307 34.808 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 PANTHER PTHR33799:SF7 3 330 3.8E-210 T 25-04-2016 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 Pfam PF03610 PTS system fructose IIA component 4 114 3.1E-35 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 SUPERFAMILY SSF53062 1 137 4.19E-36 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 Gene3D G3DSA:3.40.50.510 2 142 1.5E-49 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 SUPERFAMILY SSF52728 169 327 8.5E-53 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 PANTHER PTHR33799 3 330 3.8E-210 T 25-04-2016 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 Gene3D G3DSA:3.40.35.10 169 327 9.9E-63 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APQ13_RS09050 617ab4fa8dff6708e2581e4a6bc928cb 330 Pfam PF03830 PTS system sorbose subfamily IIB component 170 316 3.2E-50 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 SUPERFAMILY SSF47384 80 145 6.67E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 SMART SM00388 82 145 0.0061 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 Gene3D G3DSA:3.30.565.10 152 292 2.1E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 Gene3D G3DSA:1.10.287.130 82 140 8.0E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 SUPERFAMILY SSF55874 153 287 1.72E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 191 289 1.2E-5 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 PANTHER PTHR24423 55 292 2.5E-20 T 25-04-2016 APQ13_RS03095 e6a6c95fe8cc94d83f919dbef8c5ac16 292 PANTHER PTHR24423:SF427 55 292 2.5E-20 T 25-04-2016 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 438 5.7E-157 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 Pfam PF01235 Sodium:alanine symporter family 50 445 7.7E-150 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PRINTS PR00175 Sodium/alanine symporter signature 407 427 3.5E-56 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PRINTS PR00175 Sodium/alanine symporter signature 180 198 3.5E-56 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.5E-56 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.5E-56 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PRINTS PR00175 Sodium/alanine symporter signature 208 227 3.5E-56 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PRINTS PR00175 Sodium/alanine symporter signature 348 370 3.5E-56 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PANTHER PTHR30330:SF3 1 441 3.4E-217 T 25-04-2016 APQ13_RS02470 a20956d2b9dee08cb49d6ebf3d95075c 454 PANTHER PTHR30330 1 441 3.4E-217 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 PIRSF PIRSF004803 3 557 1.6E-222 T 25-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 Hamap MF_01491 Ribonuclease J [rnj]. 6 557 45.0 T 25-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 SMART SM00849 23 217 2.3E-25 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 SUPERFAMILY SSF56281 13 425 6.16E-91 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 366 394 - T 25-04-2016 IPR001587 Ribonuclease J, conserved site APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 Gene3D G3DSA:3.60.15.10 9 257 7.7E-77 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 12 554 1.3E-195 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 PANTHER PTHR11203:SF22 2 557 1.1E-234 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 409 1.5E-9 T 25-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 PANTHER PTHR11203 2 557 1.1E-234 T 25-04-2016 APQ13_RS06065 fb25d2a5918aaa0fa5cb0aeb6205e27a 560 Pfam PF00753 Metallo-beta-lactamase superfamily 21 169 5.7E-16 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01090 7b14224b5fd7f8ed95224170efec6b38 434 PANTHER PTHR37291:SF1 55 417 7.5E-42 T 25-04-2016 APQ13_RS01090 7b14224b5fd7f8ed95224170efec6b38 434 Gene3D G3DSA:3.40.50.300 124 331 1.5E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01090 7b14224b5fd7f8ed95224170efec6b38 434 SUPERFAMILY SSF52540 160 334 6.81E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01090 7b14224b5fd7f8ed95224170efec6b38 434 PANTHER PTHR37291 55 417 7.5E-42 T 25-04-2016 APQ13_RS01090 7b14224b5fd7f8ed95224170efec6b38 434 SMART SM00382 163 334 1.0E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01090 7b14224b5fd7f8ed95224170efec6b38 434 Pfam PF07728 AAA domain (dynein-related subfamily) 166 325 8.6E-16 T 25-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APQ13_RS09355 cd26b423d4db2a009c10eb32fb4219ba 117 PANTHER PTHR21043 1 113 9.8E-39 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APQ13_RS09355 cd26b423d4db2a009c10eb32fb4219ba 117 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 1.1E-27 T 25-04-2016 APQ13_RS09355 cd26b423d4db2a009c10eb32fb4219ba 117 SUPERFAMILY SSF81301 1 114 1.63E-39 T 25-04-2016 APQ13_RS09355 cd26b423d4db2a009c10eb32fb4219ba 117 Gene3D G3DSA:3.30.460.10 2 107 1.8E-39 T 25-04-2016 APQ13_RS09355 cd26b423d4db2a009c10eb32fb4219ba 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 4.6E-36 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APQ13_RS09355 cd26b423d4db2a009c10eb32fb4219ba 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 105 24.988 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 Pfam PF14489 QueF-like protein 59 137 3.6E-35 T 25-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 162 71.383 T 25-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 PANTHER PTHR34354 3 148 6.3E-67 T 25-04-2016 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 Gene3D G3DSA:3.30.1130.10 15 145 1.4E-56 T 25-04-2016 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 PIRSF PIRSF027377 4 144 3.8E-64 T 25-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 PANTHER PTHR34354:SF1 3 148 6.3E-67 T 25-04-2016 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 135 1.3E-54 T 25-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS03605 de543cd3456f0cfbbc825b07360d4e45 162 SUPERFAMILY SSF55620 18 132 4.82E-29 T 25-04-2016 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 SUPERFAMILY SSF109604 337 491 3.49E-19 T 25-04-2016 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 676 6.5E-214 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 7.1E-31 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 7.1E-31 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 7.1E-31 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 7.1E-31 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 7.1E-31 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 676 25.899 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 547 2.7E-196 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PANTHER PTHR30075:SF2 1 679 3.6E-300 T 25-04-2016 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 PANTHER PTHR30075 1 679 3.6E-300 T 25-04-2016 APQ13_RS05730 dfd3d7dc7cbfff020661f9a3b77c20b6 679 Gene3D G3DSA:1.10.3210.10 336 462 9.9E-4 T 25-04-2016 IPR006674 HD domain APQ13_RS01725 d5326556000fd890880e6658e453f031 154 PANTHER PTHR33498 1 150 1.2E-46 T 25-04-2016 APQ13_RS01725 d5326556000fd890880e6658e453f031 154 Pfam PF01610 Transposase 2 136 1.9E-17 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain APQ13_RS01725 d5326556000fd890880e6658e453f031 154 PANTHER PTHR33498:SF1 1 150 1.2E-46 T 25-04-2016 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 SMART SM00437 260 521 3.1E-109 T 25-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:3.40.50.140 20 152 6.2E-44 T 25-04-2016 IPR006171 Toprim domain APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 SMART SM00493 21 121 1.6E-28 T 25-04-2016 IPR006171 Toprim domain APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 311 320 2.5E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 95 108 2.5E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 2.5E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 484 498 2.5E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 180 198 2.5E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:2.70.20.10 334 467 4.1E-30 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:2.70.20.10 202 331 1.8E-30 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Pfam PF01751 Toprim domain 23 131 2.7E-29 T 25-04-2016 IPR006171 Toprim domain APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:1.10.460.10 631 634 3.3E-58 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:1.10.460.10 468 572 3.3E-58 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:1.10.460.10 153 200 3.3E-58 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 628 666 2.7E-12 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 624 1.6E-13 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 668 703 0.014 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PANTHER PTHR11390 19 699 0.0 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 23 622 3.1E-243 T 25-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 297 320 - T 25-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 SMART SM00436 122 210 3.9E-51 T 25-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Hamap MF_00952 DNA topoisomerase 1 [topA]. 21 644 55.714 T 25-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Gene3D G3DSA:3.30.65.10 576 630 5.3E-18 T 25-04-2016 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 PANTHER PTHR11390:SF27 19 699 0.0 T 25-04-2016 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 SUPERFAMILY SSF56712 21 600 1.07E-193 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 Pfam PF01131 DNA topoisomerase 146 559 1.1E-131 T 25-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APQ13_RS03215 963eb26d5ffdb97aaa8a140cbb758356 705 SUPERFAMILY SSF57783 583 624 9.35E-13 T 25-04-2016 APQ13_RS06575 027c416937242f6b271d2d02aaf9fa32 452 PANTHER PTHR11785:SF390 2 447 1.1E-146 T 25-04-2016 APQ13_RS06575 027c416937242f6b271d2d02aaf9fa32 452 PIRSF PIRSF006060 1 452 7.9E-60 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS06575 027c416937242f6b271d2d02aaf9fa32 452 PANTHER PTHR11785 2 447 1.1E-146 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS06575 027c416937242f6b271d2d02aaf9fa32 452 Pfam PF13520 Amino acid permease 7 438 2.8E-42 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 Pfam PF09397 Ftsk gamma domain 725 784 1.9E-27 T 25-04-2016 IPR018541 FtsK gamma domain APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 SMART SM00382 460 642 9.5E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 SUPERFAMILY SSF52540 400 693 7.59E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 PANTHER PTHR22683:SF41 12 784 4.0E-238 T 25-04-2016 APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 SMART SM00843 723 787 2.6E-33 T 25-04-2016 IPR018541 FtsK gamma domain APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 SUPERFAMILY SSF46785 723 786 7.44E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 Pfam PF01580 FtsK/SpoIIIE family 436 621 1.4E-58 T 25-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 PANTHER PTHR22683 12 784 4.0E-238 T 25-04-2016 APQ13_RS00460 e5858fec09ae69e609e981147ac18285 787 Gene3D G3DSA:3.40.50.300 400 687 3.3E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04925 6aef972240ea277642d985317e55497b 339 SUPERFAMILY SSF82771 251 322 1.31E-11 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily APQ13_RS04925 6aef972240ea277642d985317e55497b 339 PANTHER PTHR18895:SF75 10 242 6.8E-94 T 25-04-2016 APQ13_RS04925 6aef972240ea277642d985317e55497b 339 Gene3D G3DSA:3.40.50.150 34 245 2.3E-69 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04925 6aef972240ea277642d985317e55497b 339 SUPERFAMILY SSF53335 17 200 1.81E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04925 6aef972240ea277642d985317e55497b 339 Pfam PF01541 GIY-YIG catalytic domain 252 323 3.1E-16 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily APQ13_RS04925 6aef972240ea277642d985317e55497b 339 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS04925 6aef972240ea277642d985317e55497b 339 Pfam PF05175 Methyltransferase small domain 21 175 6.5E-13 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APQ13_RS04925 6aef972240ea277642d985317e55497b 339 PANTHER PTHR18895 10 242 6.8E-94 T 25-04-2016 APQ13_RS09140 d5d138d3ab7bc00856c3b188ed0d7a20 118 PANTHER PTHR37299 19 113 4.1E-12 T 25-04-2016 APQ13_RS09140 d5d138d3ab7bc00856c3b188ed0d7a20 118 SMART SM00850 18 115 9.6E-18 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS09140 d5d138d3ab7bc00856c3b188ed0d7a20 118 Pfam PF04397 LytTr DNA-binding domain 19 111 1.3E-19 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS09140 d5d138d3ab7bc00856c3b188ed0d7a20 118 Gene3D G3DSA:2.40.50.40 17 74 6.9E-12 T 25-04-2016 APQ13_RS04425 472e8b91f5112726c6b6c8119bce00ac 244 PANTHER PTHR24220:SF499 6 223 1.6E-73 T 25-04-2016 APQ13_RS04425 472e8b91f5112726c6b6c8119bce00ac 244 SMART SM00382 28 206 1.6E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04425 472e8b91f5112726c6b6c8119bce00ac 244 SUPERFAMILY SSF52540 3 220 3.3E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04425 472e8b91f5112726c6b6c8119bce00ac 244 Gene3D G3DSA:3.40.50.300 3 221 5.0E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04425 472e8b91f5112726c6b6c8119bce00ac 244 Pfam PF00005 ABC transporter 19 158 1.2E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS04425 472e8b91f5112726c6b6c8119bce00ac 244 PANTHER PTHR24220 6 223 1.6E-73 T 25-04-2016 APQ13_RS08170 510c8cfee4d40d8b5130d8fc3d0b1e21 254 Gene3D G3DSA:3.40.50.1820 16 123 4.1E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS08170 510c8cfee4d40d8b5130d8fc3d0b1e21 254 Gene3D G3DSA:3.40.50.1820 178 245 4.1E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS08170 510c8cfee4d40d8b5130d8fc3d0b1e21 254 PANTHER PTHR11487:SF0 15 254 1.0E-32 T 25-04-2016 APQ13_RS08170 510c8cfee4d40d8b5130d8fc3d0b1e21 254 Pfam PF00975 Thioesterase domain 16 240 1.4E-24 T 25-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 APQ13_RS08170 510c8cfee4d40d8b5130d8fc3d0b1e21 254 PANTHER PTHR11487 15 254 1.0E-32 T 25-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 APQ13_RS08170 510c8cfee4d40d8b5130d8fc3d0b1e21 254 SUPERFAMILY SSF53474 16 244 1.04E-26 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 SUPERFAMILY SSF53756 8 382 1.77E-71 T 25-04-2016 APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 13 384 1.8E-79 T 25-04-2016 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 ProSitePatterns PS00375 UDP-glycosyltransferases signature. 277 318 - T 25-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 221 367 1.5E-17 T 25-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 PANTHER PTHR11926 2 358 1.9E-44 T 25-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 Gene3D G3DSA:3.40.50.2000 8 222 7.8E-11 T 25-04-2016 APQ13_RS09310 1fec40adf588d359a62e4c3ce1f9e638 389 Gene3D G3DSA:3.40.50.2000 223 361 3.8E-33 T 25-04-2016 APQ13_RS00955 8435e9bb492f4802ee2e0843777d4297 234 Gene3D G3DSA:1.10.3720.10 21 224 1.5E-46 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00955 8435e9bb492f4802ee2e0843777d4297 234 SUPERFAMILY SSF161098 25 217 1.7E-42 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00955 8435e9bb492f4802ee2e0843777d4297 234 PANTHER PTHR30614 16 234 5.4E-75 T 25-04-2016 APQ13_RS00955 8435e9bb492f4802ee2e0843777d4297 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 219 9.7E-18 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00955 8435e9bb492f4802ee2e0843777d4297 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 123 1.6E-25 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS03235 5a21f17139ccc2a3912d2075e63a1760 340 Gene3D G3DSA:3.40.50.1980 186 337 1.3E-36 T 25-04-2016 APQ13_RS03235 5a21f17139ccc2a3912d2075e63a1760 340 Pfam PF01497 Periplasmic binding protein 66 309 3.4E-34 T 25-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APQ13_RS03235 5a21f17139ccc2a3912d2075e63a1760 340 PANTHER PTHR30532:SF4 1 339 5.7E-88 T 25-04-2016 APQ13_RS03235 5a21f17139ccc2a3912d2075e63a1760 340 PANTHER PTHR30532 1 339 5.7E-88 T 25-04-2016 APQ13_RS03235 5a21f17139ccc2a3912d2075e63a1760 340 SUPERFAMILY SSF53807 52 323 3.92E-62 T 25-04-2016 APQ13_RS03235 5a21f17139ccc2a3912d2075e63a1760 340 Gene3D G3DSA:3.40.50.1980 55 185 1.9E-25 T 25-04-2016 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 SUPERFAMILY SSF47729 3 91 1.15E-33 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.9E-35 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 PANTHER PTHR33175 1 91 1.7E-45 T 25-04-2016 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 Gene3D G3DSA:4.10.520.10 3 91 2.7E-39 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 25-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.4E-22 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.4E-22 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.4E-22 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APQ13_RS05045 8f1e88a32232ddaaa90501b72fe0853f 91 SMART SM00411 2 91 2.5E-47 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 363 379 1.6E-13 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 403 417 1.6E-13 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.6E-13 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.6E-13 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 PANTHER PTHR22594:SF16 6 448 4.7E-185 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 PANTHER PTHR22594 6 448 4.7E-185 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 Gene3D G3DSA:3.30.930.10 113 447 2.8E-104 T 25-04-2016 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 SUPERFAMILY SSF50249 12 113 1.07E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 Gene3D G3DSA:2.40.50.140 11 112 8.7E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 448 39.628 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 10 447 6.4E-139 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 442 3.9E-77 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 Pfam PF01336 OB-fold nucleic acid binding domain 19 106 1.2E-13 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APQ13_RS01800 c3995a8ffba3d4f1da346cac6539c6e1 448 SUPERFAMILY SSF55681 121 442 2.3E-87 T 25-04-2016 APQ13_RS06470 b296b9d88a0153c9c8a3f1934554e730 150 PANTHER PTHR30505:SF3 1 146 8.8E-51 T 25-04-2016 APQ13_RS06470 b296b9d88a0153c9c8a3f1934554e730 150 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06470 b296b9d88a0153c9c8a3f1934554e730 150 SUPERFAMILY SSF55804 1 146 3.92E-35 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS06470 b296b9d88a0153c9c8a3f1934554e730 150 Gene3D G3DSA:3.40.930.10 2 149 6.5E-52 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06470 b296b9d88a0153c9c8a3f1934554e730 150 PANTHER PTHR30505 1 146 8.8E-51 T 25-04-2016 APQ13_RS06470 b296b9d88a0153c9c8a3f1934554e730 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 9.7E-32 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.272 T 25-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 SUPERFAMILY SSF52080 4 144 9.42E-49 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 4.3E-55 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 25-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 7.5E-37 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 PANTHER PTHR12934 1 146 1.2E-74 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08495 cd4f60a39c983bda519724743989aea9 146 Gene3D G3DSA:3.100.10.10 32 146 4.5E-40 T 25-04-2016 APQ13_RS00465 25d0fc6569ee4c072d8baba26a3007bc 115 Pfam PF11877 Protein of unknown function (DUF3397) 4 112 4.0E-28 T 25-04-2016 IPR024515 Protein of unknown function DUF3397 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 410 1.2E-107 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 419 3.8E-161 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 SUPERFAMILY SSF55205 8 422 9.94E-135 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 Gene3D G3DSA:3.65.10.10 22 223 2.7E-64 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 Gene3D G3DSA:3.65.10.10 224 421 9.8E-58 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 PANTHER PTHR21090:SF19 2 423 1.2E-249 T 25-04-2016 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 PANTHER PTHR21090 2 423 1.2E-249 T 25-04-2016 APQ13_RS00935 09516345d1477d8fdd7efe4040b9c209 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 420 44.055 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 Gene3D G3DSA:1.20.1560.10 12 328 3.8E-74 T 25-04-2016 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 SUPERFAMILY SSF90123 2 328 1.7E-74 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 PANTHER PTHR24221 9 582 3.5E-270 T 25-04-2016 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 Pfam PF00005 ABC transporter 361 508 2.3E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 Gene3D G3DSA:3.40.50.300 344 572 6.2E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 Pfam PF00664 ABC transporter transmembrane region 24 297 7.5E-47 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 SMART SM00382 369 554 1.9E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 PANTHER PTHR24221:SF271 9 582 3.5E-270 T 25-04-2016 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03575 90dfb930089a13b95931082fa97c6e39 584 SUPERFAMILY SSF52540 334 579 8.68E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 PANTHER PTHR11712 4 409 5.7E-171 T 25-04-2016 APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 364 9.1E-32 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 SUPERFAMILY SSF53901 4 251 2.13E-67 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 SUPERFAMILY SSF53901 214 408 4.89E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 2.2E-51 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 PIRSF PIRSF000447 1 410 1.9E-175 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 Gene3D G3DSA:3.40.47.10 263 409 6.5E-55 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 SMART SM00825 Beta-ketoacyl synthase 6 399 4.6E-12 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 406 7.1E-172 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APQ13_RS09655 1722235fea09575d71e20447a5bd3b84 410 Gene3D G3DSA:3.40.47.10 4 259 1.3E-67 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 SUPERFAMILY SSF54211 1 85 4.93E-33 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 PANTHER PTHR23133 1 194 8.8E-103 T 25-04-2016 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 Gene3D G3DSA:3.30.230.40 1 89 1.9E-38 T 25-04-2016 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 PANTHER PTHR23133:SF2 1 194 8.8E-103 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 Gene3D G3DSA:3.30.230.40 90 194 7.6E-32 T 25-04-2016 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 1.4E-65 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 25-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 SUPERFAMILY SSF54211 87 179 1.9E-35 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 42.0 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APQ13_RS01995 5fd1bedef83b8ceb753dc8960dec2fa6 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 25-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APQ13_RS06210 14e66a9daf4c1c6f22350bccb888632f 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 2.0E-7 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06210 14e66a9daf4c1c6f22350bccb888632f 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 2.7E-20 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06210 14e66a9daf4c1c6f22350bccb888632f 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 25-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06210 14e66a9daf4c1c6f22350bccb888632f 44 PANTHER PTHR14503 2 44 2.4E-18 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06210 14e66a9daf4c1c6f22350bccb888632f 44 Pfam PF00468 Ribosomal protein L34 2 44 5.0E-22 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06210 14e66a9daf4c1c6f22350bccb888632f 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.594 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS00835 29e8ab4cc96d77daf92cb8a9ed7d2242 152 PANTHER PTHR38459 1 151 2.2E-18 T 25-04-2016 APQ13_RS00835 29e8ab4cc96d77daf92cb8a9ed7d2242 152 Pfam PF04138 GtrA-like protein 20 146 1.5E-23 T 25-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 Gene3D G3DSA:3.40.50.300 14 128 1.3E-143 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 Gene3D G3DSA:3.40.50.300 248 441 1.3E-143 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 25-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 PANTHER PTHR10025 1 555 0.0 T 25-04-2016 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 Gene3D G3DSA:3.10.410.10 443 532 5.6E-39 T 25-04-2016 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 1.1E-263 T 25-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 Gene3D G3DSA:3.30.1510.10 129 246 1.2E-54 T 25-04-2016 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 48.635 T 25-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 SUPERFAMILY SSF52540 4 554 1.31E-240 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02930 03fea26b794a596abac0a109d2d00240 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 25-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APQ13_RS01780 93a04ce0b9af24d2b81f106fee258654 217 PANTHER PTHR24220:SF66 106 194 9.5E-13 T 25-04-2016 APQ13_RS01780 93a04ce0b9af24d2b81f106fee258654 217 Pfam PF00005 ABC transporter 16 145 4.9E-11 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01780 93a04ce0b9af24d2b81f106fee258654 217 PANTHER PTHR24220 106 194 9.5E-13 T 25-04-2016 APQ13_RS01780 93a04ce0b9af24d2b81f106fee258654 217 Gene3D G3DSA:3.40.50.300 2 209 1.8E-27 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01780 93a04ce0b9af24d2b81f106fee258654 217 SUPERFAMILY SSF52540 5 194 1.42E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 PANTHER PTHR11751 14 388 1.2E-165 T 25-04-2016 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 Gene3D G3DSA:3.90.1150.10 256 388 1.6E-39 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 Pfam PF00155 Aminotransferase class I and II 31 382 5.7E-61 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 4.7E-13 T 25-04-2016 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 4.7E-13 T 25-04-2016 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 93 113 4.7E-13 T 25-04-2016 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 4.7E-13 T 25-04-2016 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 Gene3D G3DSA:3.40.640.10 44 255 2.1E-66 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 SUPERFAMILY SSF53383 6 389 2.26E-105 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS07465 7ca3c83801c03428b00e7a2230044b3b 391 PANTHER PTHR11751:SF417 14 388 1.2E-165 T 25-04-2016 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 25-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PIRSF PIRSF000724 1 398 1.1E-130 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 Gene3D G3DSA:3.40.50.1270 186 385 2.4E-75 T 25-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 Gene3D G3DSA:3.40.50.1260 4 185 6.3E-68 T 25-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 SUPERFAMILY SSF53748 3 397 4.95E-142 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 Pfam PF00162 Phosphoglycerate kinase 6 387 2.4E-145 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PANTHER PTHR11406 1 398 6.8E-198 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS06100 78d64595cdee688e91f01012de8e8b5d 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 397 39.45 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 PANTHER PTHR11638 103 753 0.0 T 25-04-2016 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Gene3D G3DSA:1.10.8.60 661 743 4.7E-26 T 25-04-2016 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 SMART SM01086 650 738 2.6E-28 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 529 547 1.8E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 484 502 1.8E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 605 1.8E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 558 576 1.8E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Pfam PF02151 UvrB/uvrC motif 368 400 2.5E-7 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 SUPERFAMILY SSF52540 113 365 1.15E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 156 275 6.7E-14 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Pfam PF07724 AAA domain (Cdc48 subfamily) 479 642 4.0E-49 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 SMART SM00382 151 291 6.9E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 SMART SM00382 480 651 5.6E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Gene3D G3DSA:3.40.50.300 114 294 4.1E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 SUPERFAMILY SSF52540 429 720 3.37E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Gene3D G3DSA:3.40.50.300 435 660 6.2E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Gene3D G3DSA:1.10.8.60 296 376 2.8E-31 T 25-04-2016 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 PANTHER PTHR11638:SF117 103 753 0.0 T 25-04-2016 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 650 721 4.3E-22 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 247 259 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APQ13_RS05160 19955b121fae310157b83d6d24cec007 753 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 514 532 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Gene3D G3DSA:1.10.260.30 328 430 1.7E-37 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 PANTHER PTHR11564:SF7 1 435 6.6E-254 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 3.6E-23 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 1.8E-77 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 1.6E-189 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 467 34.407 T 25-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 SMART SM00963 2 87 2.9E-32 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 SMART SM00962 101 297 1.3E-112 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 SUPERFAMILY SSF47446 329 429 1.96E-34 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 SUPERFAMILY SSF52540 43 355 7.79E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Gene3D G3DSA:3.40.50.300 98 298 5.2E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 PANTHER PTHR11564 1 435 6.6E-254 T 25-04-2016 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 SMART SM00382 100 248 1.8E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Pfam PF02978 Signal peptide binding domain 329 427 5.3E-31 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APQ13_RS02995 9a5ce2b0ebbc2697119329c5cb5476dd 512 Gene3D G3DSA:1.20.120.140 3 90 8.8E-34 T 25-04-2016 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 Pfam PF02780 Transketolase, C-terminal domain 546 650 1.2E-13 T 25-04-2016 IPR033248 Transketolase, C-terminal domain APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 SUPERFAMILY SSF52922 527 657 2.36E-40 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 ProSitePatterns PS00801 Transketolase signature 1. 10 30 - T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.2E-148 T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 PANTHER PTHR11624:SF1 338 655 0.0 T 25-04-2016 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 PANTHER PTHR11624:SF1 1 310 0.0 T 25-04-2016 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 Gene3D G3DSA:3.40.50.970 5 320 7.0E-116 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 Pfam PF02779 Transketolase, pyrimidine binding domain 352 521 1.8E-43 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 Gene3D G3DSA:3.40.50.920 533 656 1.4E-45 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 PANTHER PTHR11624 338 655 0.0 T 25-04-2016 IPR033247 Transketolase family APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 PANTHER PTHR11624 1 310 0.0 T 25-04-2016 IPR033247 Transketolase family APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 SUPERFAMILY SSF52518 4 320 1.35E-108 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 SMART SM00861 351 522 8.8E-63 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 Gene3D G3DSA:3.40.50.970 330 526 4.9E-70 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 ProSitePatterns PS00802 Transketolase signature 2. 464 480 - T 25-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 SUPERFAMILY SSF52518 340 521 4.21E-63 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06450 f9ffab244807004bbfa056bcc874a9f6 658 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 657 2.3E-275 T 25-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Gene3D G3DSA:3.40.50.300 170 357 7.7E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Gene3D G3DSA:3.40.50.300 3 169 2.4E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Pfam PF01926 50S ribosome-binding GTPase 177 295 1.8E-24 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 2.8E-26 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 PANTHER PTHR11649 1 436 1.4E-145 T 25-04-2016 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 SUPERFAMILY SSF52540 4 166 1.7E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 342 7.5E-26 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 125 3.6E-23 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 SUPERFAMILY SSF52540 138 435 4.04E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 PANTHER PTHR11649:SF5 1 436 1.4E-145 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 PIRSF PIRSF006485 2 436 1.0E-168 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Gene3D G3DSA:3.30.300.20 358 436 8.5E-38 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 3.4E-171 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 2.2E-33 T 25-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APQ13_RS08925 1c1786006c48d8f59d3d98b45a7ff92f 436 Hamap MF_00195 GTPase Der [der]. 3 436 39.601 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APQ13_RS02485 09b4efb54e6c299757e64dfa8fd8a941 246 PANTHER PTHR31118 15 241 5.8E-59 T 25-04-2016 APQ13_RS02485 09b4efb54e6c299757e64dfa8fd8a941 246 Gene3D G3DSA:3.50.30.50 14 244 2.4E-58 T 25-04-2016 APQ13_RS02485 09b4efb54e6c299757e64dfa8fd8a941 246 PANTHER PTHR31118:SF9 15 241 5.8E-59 T 25-04-2016 APQ13_RS02485 09b4efb54e6c299757e64dfa8fd8a941 246 Pfam PF04199 Putative cyclase 17 181 1.1E-31 T 25-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 APQ13_RS02485 09b4efb54e6c299757e64dfa8fd8a941 246 SUPERFAMILY SSF102198 14 243 2.22E-54 T 25-04-2016 APQ13_RS04620 b67147bc62977ab9f587c5cf78970b23 1137 SUPERFAMILY SSF52540 607 984 2.34E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04620 b67147bc62977ab9f587c5cf78970b23 1137 Pfam PF01935 Domain of unknown function DUF87 608 840 2.4E-13 T 25-04-2016 IPR002789 Helicase HerA, central domain APQ13_RS04620 b67147bc62977ab9f587c5cf78970b23 1137 Gene3D G3DSA:3.40.50.300 810 980 1.5E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04620 b67147bc62977ab9f587c5cf78970b23 1137 Gene3D G3DSA:3.40.50.300 610 707 1.5E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04620 b67147bc62977ab9f587c5cf78970b23 1137 PANTHER PTHR30121 593 1046 1.7E-22 T 25-04-2016 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 PANTHER PTHR30111:SF1 1 288 9.7E-82 T 25-04-2016 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 289 36.615 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 Gene3D G3DSA:3.55.30.10 1 231 1.2E-74 T 25-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 SUPERFAMILY SSF64397 1 239 7.72E-65 T 25-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 Pfam PF01430 Hsp33 protein 2 277 1.6E-82 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 PIRSF PIRSF005261 1 290 7.6E-76 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 SUPERFAMILY SSF118352 231 288 1.57E-19 T 25-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 Gene3D G3DSA:3.90.1280.10 232 288 3.4E-24 T 25-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APQ13_RS06850 24eb2c92e725ed4f2157c868ce8754a3 290 PANTHER PTHR30111 1 288 9.7E-82 T 25-04-2016 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 25-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 Gene3D G3DSA:3.40.50.1100 44 141 5.0E-42 T 25-04-2016 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 Gene3D G3DSA:3.40.50.1100 2 43 2.8E-66 T 25-04-2016 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 Gene3D G3DSA:3.40.50.1100 150 306 2.8E-66 T 25-04-2016 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 PANTHER PTHR10314:SF110 3 306 1.3E-142 T 25-04-2016 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 5.3E-130 T 25-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 3.1E-63 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 3.7E-124 T 25-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 SUPERFAMILY SSF53686 3 305 2.75E-97 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS05505 2ac05ef285fd8cd0c0874d8c6198b64b 308 PANTHER PTHR10314 3 306 1.3E-142 T 25-04-2016 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 PIRSF PIRSF000728 1 244 1.8E-73 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 SUPERFAMILY SSF53633 1 244 6.02E-53 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 PRINTS PR00474 Glutamate 5-kinase family signature 32 46 5.5E-6 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 5.5E-6 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 Gene3D G3DSA:3.40.1160.10 2 238 4.3E-62 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 PANTHER PTHR23342 4 244 6.8E-52 T 25-04-2016 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 Pfam PF00696 Amino acid kinase family 4 233 6.9E-36 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 232 5.1E-67 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04710 72234912c285fbc80757151c94d5aecb 245 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 244 24.945 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 Gene3D G3DSA:3.40.190.10 35 128 1.2E-36 T 25-04-2016 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 Gene3D G3DSA:3.40.190.10 225 259 1.2E-36 T 25-04-2016 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 PANTHER PTHR30614:SF15 32 265 2.2E-65 T 25-04-2016 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 SUPERFAMILY SSF53850 4 258 6.8E-59 T 25-04-2016 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 PANTHER PTHR30614 32 265 2.2E-65 T 25-04-2016 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 258 4.1E-53 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 SMART SM00062 39 262 4.3E-44 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 Gene3D G3DSA:3.40.190.10 130 215 3.7E-17 T 25-04-2016 APQ13_RS04045 ac15b109b90655fde572619693ad1d47 271 SMART SM00079 39 261 0.0014 T 25-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APQ13_RS09335 5250dcabecfdae6a03c8d5ebdb1a29b7 368 SUPERFAMILY SSF52540 65 282 3.67E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09335 5250dcabecfdae6a03c8d5ebdb1a29b7 368 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 368 1.4E-155 T 25-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH APQ13_RS09335 5250dcabecfdae6a03c8d5ebdb1a29b7 368 Gene3D G3DSA:3.40.50.300 72 225 2.7E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09335 5250dcabecfdae6a03c8d5ebdb1a29b7 368 Pfam PF01926 50S ribosome-binding GTPase 166 231 5.8E-14 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS09335 5250dcabecfdae6a03c8d5ebdb1a29b7 368 PANTHER PTHR11089 1 368 2.1E-204 T 25-04-2016 APQ13_RS09335 5250dcabecfdae6a03c8d5ebdb1a29b7 368 PANTHER PTHR11089:SF34 1 368 2.1E-204 T 25-04-2016 APQ13_RS06185 73ad2e9c7e7d05164529406146d9acec 104 PANTHER PTHR33204 5 104 9.1E-24 T 25-04-2016 APQ13_RS06185 73ad2e9c7e7d05164529406146d9acec 104 Gene3D G3DSA:1.10.10.10 5 103 2.1E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06185 73ad2e9c7e7d05164529406146d9acec 104 SUPERFAMILY SSF46785 5 104 4.79E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06185 73ad2e9c7e7d05164529406146d9acec 104 Pfam PF01638 HxlR-like helix-turn-helix 18 103 1.1E-17 T 25-04-2016 IPR002577 Helix-turn-helix, HxlR type APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 Gene3D G3DSA:3.60.120.10 7 449 7.3E-153 T 25-04-2016 IPR005801 ADC synthase GO:0009058 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 PANTHER PTHR11236 4 448 3.6E-205 T 25-04-2016 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 PANTHER PTHR11236:SF9 4 448 3.6E-205 T 25-04-2016 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 PRINTS PR00095 Anthranilate synthase component I signature 384 398 3.4E-23 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 PRINTS PR00095 Anthranilate synthase component I signature 290 303 3.4E-23 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 PRINTS PR00095 Anthranilate synthase component I signature 304 317 3.4E-23 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 PRINTS PR00095 Anthranilate synthase component I signature 399 413 3.4E-23 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 Pfam PF00425 chorismate binding enzyme 189 442 3.3E-92 T 25-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 9 449 2.0E-174 T 25-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 9 139 5.8E-31 T 25-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05300 679b319de781d758a84f4b24ef57ca2e 453 SUPERFAMILY SSF56322 5 448 1.11E-145 T 25-04-2016 IPR005801 ADC synthase GO:0009058 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 TIGRFAM TIGR02003 PTS-II-BC-unk1: PTS system, IIBC component 6 554 3.6E-291 T 25-04-2016 IPR011300 Phosphotransferase system, IIBC component KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 491 508 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 PANTHER PTHR30009 10 564 1.3E-300 T 25-04-2016 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 582 706 1.5E-46 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 441 538 2.3E-19 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 SUPERFAMILY SSF55604 479 552 1.12E-19 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 Pfam PF00367 phosphotransferase system, EIIB 481 512 6.8E-14 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 SUPERFAMILY SSF51261 580 725 1.01E-48 T 25-04-2016 IPR011055 Duplicated hybrid motif APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 645 657 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 Gene3D G3DSA:3.30.1360.60 475 553 4.8E-26 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 PANTHER PTHR30009:SF8 10 564 1.3E-300 T 25-04-2016 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 Pfam PF02378 Phosphotransferase system, EIIC 18 381 5.6E-55 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 586 703 4.5E-39 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS08295 5850be659145fbfadb70f485d99ca240 729 Gene3D G3DSA:2.70.70.10 579 727 6.4E-55 T 25-04-2016 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 SUPERFAMILY SSF51366 2 229 1.0E-71 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 224 1.9E-51 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 Gene3D G3DSA:3.20.20.70 2 228 1.9E-83 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 25-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 PANTHER PTHR32119:SF2 1 229 1.1E-109 T 25-04-2016 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 SMART SM00934 5 224 1.2E-93 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 PANTHER PTHR32119 1 229 1.1E-109 T 25-04-2016 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 225 6.9E-63 T 25-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02255 4110e08f631c5e5192b901f87dc798f3 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 229 40.807 T 25-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS00350 0ef6c3d5c44ce1f7e020e972f214b2d4 184 SUPERFAMILY SSF55729 1 157 8.37E-22 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS00350 0ef6c3d5c44ce1f7e020e972f214b2d4 184 Pfam PF00583 Acetyltransferase (GNAT) family 58 146 2.5E-7 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS00350 0ef6c3d5c44ce1f7e020e972f214b2d4 184 Gene3D G3DSA:3.40.630.30 1 179 3.0E-60 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Gene3D G3DSA:2.60.120.260 677 757 2.8E-59 T 25-04-2016 IPR008979 Galactose-binding domain-like APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Gene3D G3DSA:2.60.120.260 543 638 2.8E-59 T 25-04-2016 IPR008979 Galactose-binding domain-like APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 SUPERFAMILY SSF53474 149 551 1.01E-96 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 527 751 5.6E-29 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Gene3D G3DSA:3.40.50.1820 163 215 3.6E-50 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Gene3D G3DSA:3.40.50.1820 264 382 3.6E-50 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Gene3D G3DSA:3.40.50.1820 456 542 3.6E-50 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Hamap MF_00698 Xaa-Pro dipeptidyl-peptidase [pepX]. 1 757 37.271 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 SMART SM00940 1 145 1.4E-74 T 25-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 SUPERFAMILY SSF81761 1 147 3.53E-45 T 25-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PANTHER PTHR11731 437 534 1.2E-50 T 25-04-2016 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PANTHER PTHR11731 164 214 1.2E-50 T 25-04-2016 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PANTHER PTHR11731 259 400 1.2E-50 T 25-04-2016 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 SUPERFAMILY SSF49785 550 757 1.87E-73 T 25-04-2016 IPR008979 Galactose-binding domain-like APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 145 1.5E-45 T 25-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PANTHER PTHR11731:SF148 437 534 1.2E-50 T 25-04-2016 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PANTHER PTHR11731:SF148 164 214 1.2E-50 T 25-04-2016 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PANTHER PTHR11731:SF148 259 400 1.2E-50 T 25-04-2016 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 188 197 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 154 166 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 170 180 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 722 737 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 372 388 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 507 523 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 202 218 2.4E-39 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 SMART SM00939 515 754 2.4E-56 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 APQ13_RS05950 ade3284e47d72263cacc59fdfce42052 758 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 184 501 8.1E-85 T 25-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 SUPERFAMILY SSF52833 1 122 3.07E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 6.3E-35 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 Pfam PF00462 Glutaredoxin 2 45 4.1E-6 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 PANTHER PTHR30041:SF5 1 130 1.1E-63 T 25-04-2016 APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 Gene3D G3DSA:3.40.30.10 1 114 9.0E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 Pfam PF03960 ArsC family 55 113 8.6E-19 T 25-04-2016 IPR006660 Arsenate reductase-like APQ13_RS08035 22d14b084e15324d74bed56fc4514298 132 PANTHER PTHR30041 1 130 1.1E-63 T 25-04-2016 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 SUPERFAMILY SSF51735 3 145 3.45E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 PIRSF PIRSF000161 1 255 1.2E-67 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 Gene3D G3DSA:3.30.360.10 129 224 9.3E-37 T 25-04-2016 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 PANTHER PTHR20836 1 255 4.2E-83 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 255 4.7E-73 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 Gene3D G3DSA:3.40.50.720 3 128 4.7E-12 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 121 255 1.4E-31 T 25-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 25-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 255 27.81 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 SUPERFAMILY SSF55347 119 227 8.94E-40 T 25-04-2016 APQ13_RS03660 32866226922aefdfff46bcdaf417d42c 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 118 2.7E-29 T 25-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 PANTHER PTHR22573:SF15 1 448 6.2E-164 T 25-04-2016 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Gene3D G3DSA:3.30.310.50 369 445 3.8E-20 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 366 7.3E-32 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 SUPERFAMILY SSF53738 257 365 3.92E-31 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Gene3D G3DSA:3.40.120.10 250 368 9.4E-38 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 5.1E-41 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 443 1.0E-14 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 5.2E-191 T 25-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Gene3D G3DSA:3.40.120.10 175 249 1.4E-20 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 SUPERFAMILY SSF53738 3 180 2.51E-42 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Gene3D G3DSA:3.40.120.10 3 152 5.4E-45 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 PANTHER PTHR22573 1 448 6.2E-164 T 25-04-2016 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 169 253 1.3E-13 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 SUPERFAMILY SSF55957 357 447 2.09E-24 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.5E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.5E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.5E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 43.472 T 25-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS01345 0777d47fe288725d883b7af50d3edd02 449 SUPERFAMILY SSF53738 157 256 2.55E-23 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APQ13_RS05895 9994e43bc066e3d2f132106e1adaccab 476 PANTHER PTHR11119 171 462 7.5E-136 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APQ13_RS05895 9994e43bc066e3d2f132106e1adaccab 476 PANTHER PTHR11119 1 150 7.5E-136 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APQ13_RS05895 9994e43bc066e3d2f132106e1adaccab 476 Pfam PF00860 Permease family 17 435 2.3E-37 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APQ13_RS05895 9994e43bc066e3d2f132106e1adaccab 476 PIRSF PIRSF005353 1 475 2.6E-155 T 25-04-2016 IPR026033 Purine permease PbuG-like APQ13_RS05895 9994e43bc066e3d2f132106e1adaccab 476 PANTHER PTHR11119:SF9 171 462 7.5E-136 T 25-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APQ13_RS05895 9994e43bc066e3d2f132106e1adaccab 476 PANTHER PTHR11119:SF9 1 150 7.5E-136 T 25-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APQ13_RS03000 1ccf51544403f4057bfdacf19a55d1f8 222 Pfam PF16264 SatD family (SatD) 3 213 2.1E-106 T 25-04-2016 IPR032580 SatD family APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 174 29.393 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 Gene3D G3DSA:3.10.20.80 6 82 5.7E-33 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 SUPERFAMILY SSF54364 9 82 1.96E-27 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 ProSitePatterns PS00938 Initiation factor 3 signature. 62 75 - T 25-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 11 80 8.1E-29 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 PANTHER PTHR10938 3 172 6.0E-63 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 171 1.0E-34 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 Gene3D G3DSA:3.30.110.10 83 175 3.5E-35 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 SUPERFAMILY SSF55200 86 174 7.72E-31 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APQ13_RS04565 766789db74657b51c7902a6fe9c5063d 176 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 11 171 5.9E-63 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 25-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 SUPERFAMILY SSF50486 205 303 6.44E-31 T 25-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 SUPERFAMILY SSF53328 3 203 1.44E-57 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 PANTHER PTHR11138 3 299 9.8E-99 T 25-04-2016 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 304 2.5E-94 T 25-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 302 33.192 T 25-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 Pfam PF00551 Formyl transferase 4 179 2.1E-34 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 Pfam PF02911 Formyl transferase, C-terminal domain 204 299 1.4E-28 T 25-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 Gene3D G3DSA:3.40.50.170 3 205 4.9E-60 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS05575 19653de33b567af769d38ff9f5477d97 311 Gene3D G3DSA:3.10.25.10 208 310 1.8E-32 T 25-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS09145 3e52bdc2fe15c93a9a082984392f858d 220 Pfam PF06570 Protein of unknown function (DUF1129) 5 212 2.3E-76 T 25-04-2016 IPR009214 Protein of unknown function DUF1129 APQ13_RS09145 3e52bdc2fe15c93a9a082984392f858d 220 PIRSF PIRSF033111 1 220 6.0E-105 T 25-04-2016 IPR009214 Protein of unknown function DUF1129 APQ13_RS09145 3e52bdc2fe15c93a9a082984392f858d 220 SUPERFAMILY SSF103473 91 207 9.42E-5 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 252 1.7E-118 T 25-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 SMART SM00382 30 223 2.0E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 Gene3D G3DSA:3.40.50.300 4 246 3.9E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 SUPERFAMILY SSF52540 3 239 5.7E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 PANTHER PTHR24220 7 249 1.8E-125 T 25-04-2016 APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 Pfam PF00005 ABC transporter 21 177 3.5E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02645 31357723b8f5e37dfe8a998b6cbbae2c 252 PANTHER PTHR24220:SF585 7 249 1.8E-125 T 25-04-2016 APQ13_RS04990 d355724f366f07ecd638c059b9875acf 316 PANTHER PTHR10361 1 306 7.5E-81 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APQ13_RS04990 d355724f366f07ecd638c059b9875acf 316 Pfam PF01758 Sodium Bile acid symporter family 43 219 4.6E-36 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 PANTHER PTHR10954 12 302 1.0E-81 T 25-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 Pfam PF11858 Domain of unknown function (DUF3378) 3 76 7.4E-23 T 25-04-2016 IPR024568 Ribonuclease HIII, N-terminal APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 SUPERFAMILY SSF53098 87 301 2.88E-48 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 300 35.951 T 25-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 Pfam PF01351 Ribonuclease HII 88 293 1.6E-48 T 25-04-2016 IPR024567 Ribonuclease HII/HIII domain APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 Gene3D G3DSA:3.30.420.10 87 251 3.9E-34 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 7 292 2.9E-53 T 25-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 PANTHER PTHR10954:SF12 12 302 1.0E-81 T 25-04-2016 APQ13_RS09070 d7d1d22af37556065aa4984b3a465d43 303 PIRSF PIRSF037748 1 301 1.1E-110 T 25-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 APQ13_RS02630 49a26d1e21fca0711ae9dfcf8c8fc6a2 311 SUPERFAMILY SSF161098 23 302 1.11E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02630 49a26d1e21fca0711ae9dfcf8c8fc6a2 311 Gene3D G3DSA:1.10.3720.10 27 309 1.9E-43 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02630 49a26d1e21fca0711ae9dfcf8c8fc6a2 311 PANTHER PTHR30425 1 311 1.3E-158 T 25-04-2016 APQ13_RS02630 49a26d1e21fca0711ae9dfcf8c8fc6a2 311 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 20 305 7.5E-93 T 25-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APQ13_RS02630 49a26d1e21fca0711ae9dfcf8c8fc6a2 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 301 5.9E-27 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02630 49a26d1e21fca0711ae9dfcf8c8fc6a2 311 PANTHER PTHR30425:SF6 1 311 1.3E-158 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 Gene3D G3DSA:3.40.190.10 125 222 2.0E-42 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 Gene3D G3DSA:3.40.190.10 38 124 2.2E-20 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 Gene3D G3DSA:3.40.190.10 226 263 2.2E-20 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 SUPERFAMILY SSF53850 1 262 1.16E-46 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 PANTHER PTHR18966:SF208 22 266 2.6E-30 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 PANTHER PTHR18966 22 266 2.6E-30 T 25-04-2016 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 25-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 SMART SM00062 40 264 1.6E-43 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS02280 4000006b727dfb87b8c23db818fc4ed4 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 262 6.9E-44 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 PANTHER PTHR21248:SF5 50 512 5.3E-93 T 25-04-2016 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 PANTHER PTHR21248 50 512 5.3E-93 T 25-04-2016 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 SUPERFAMILY SSF56024 320 494 8.3E-37 T 25-04-2016 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 52 512 4.2E-94 T 25-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 SMART SM00155 248 275 9.7E-6 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 SMART SM00155 425 452 0.0019 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 SUPERFAMILY SSF56024 120 341 1.54E-41 T 25-04-2016 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 Pfam PF13091 PLD-like domain 167 308 4.3E-9 T 25-04-2016 IPR025202 Phospholipase D-like domain APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 Pfam PF13091 PLD-like domain 353 478 2.2E-19 T 25-04-2016 IPR025202 Phospholipase D-like domain APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 Gene3D G3DSA:3.30.870.10 143 346 1.2E-46 T 25-04-2016 APQ13_RS03290 c2859f64a23044c6dad79df8795e2dcd 512 Gene3D G3DSA:3.30.870.10 348 495 1.6E-31 T 25-04-2016 APQ13_RS02060 79b235e93e505031823847cadf05b582 328 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 53 134 6.1E-14 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APQ13_RS02060 79b235e93e505031823847cadf05b582 328 SUPERFAMILY SSF56349 51 317 3.24E-53 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APQ13_RS02060 79b235e93e505031823847cadf05b582 328 Pfam PF00589 Phage integrase family 164 315 6.5E-32 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS02060 79b235e93e505031823847cadf05b582 328 Gene3D G3DSA:1.10.150.130 51 148 9.0E-10 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal APQ13_RS02060 79b235e93e505031823847cadf05b582 328 PANTHER PTHR30349:SF5 5 327 3.5E-47 T 25-04-2016 APQ13_RS02060 79b235e93e505031823847cadf05b582 328 PANTHER PTHR30349 5 327 3.5E-47 T 25-04-2016 APQ13_RS02060 79b235e93e505031823847cadf05b582 328 Gene3D G3DSA:1.10.443.10 156 320 3.1E-40 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 Gene3D G3DSA:3.40.50.2000 191 334 1.5E-30 T 25-04-2016 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 PANTHER PTHR21015:SF27 5 354 1.6E-153 T 25-04-2016 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 PANTHER PTHR21015 5 354 1.6E-153 T 25-04-2016 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 354 23.219 T 25-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 145 1.6E-38 T 25-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 Gene3D G3DSA:3.40.50.2000 2 190 8.0E-54 T 25-04-2016 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 337 1.1E-26 T 25-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS05225 43202f48b3c424779e79c9004094b6f9 361 SUPERFAMILY SSF53756 4 335 4.28E-78 T 25-04-2016 APQ13_RS09115 f13334b4456d002ef0e5aec11e31da43 96 SUPERFAMILY SSF54995 1 95 3.92E-32 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS09115 f13334b4456d002ef0e5aec11e31da43 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 95 1.2E-26 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS09115 f13334b4456d002ef0e5aec11e31da43 96 Pfam PF01250 Ribosomal protein S6 3 93 1.1E-26 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS09115 f13334b4456d002ef0e5aec11e31da43 96 Gene3D G3DSA:3.30.70.60 1 95 1.9E-34 T 25-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APQ13_RS09115 f13334b4456d002ef0e5aec11e31da43 96 PANTHER PTHR21011 1 95 1.7E-26 T 25-04-2016 APQ13_RS09115 f13334b4456d002ef0e5aec11e31da43 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 96 22.184 T 25-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 Gene3D G3DSA:3.40.50.300 2 237 2.2E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 Gene3D G3DSA:3.40.50.300 287 528 1.6E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 SUPERFAMILY SSF52540 291 527 4.8E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 Pfam PF00005 ABC transporter 311 456 5.5E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 Pfam PF00005 ABC transporter 22 172 4.3E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 PANTHER PTHR24220 6 275 4.5E-188 T 25-04-2016 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 PANTHER PTHR24220 311 416 4.5E-188 T 25-04-2016 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 SUPERFAMILY SSF52540 3 236 3.04E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 PANTHER PTHR24220:SF588 6 275 4.5E-188 T 25-04-2016 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 PANTHER PTHR24220:SF588 311 416 4.5E-188 T 25-04-2016 APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 SMART SM00382 31 223 8.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 SMART SM00382 320 504 3.6E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08860 263c29dec1a0d9ef00fe14e33a52aebb 558 Pfam PF12558 ATP-binding cassette cobalt transporter 236 302 2.8E-14 T 25-04-2016 IPR022216 ABC cobalt transporter GO:0016820 KEGG: 00920+3.6.3.- APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 25-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 PANTHER PTHR11880 1 91 3.1E-53 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.472 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 Pfam PF00203 Ribosomal protein S19 3 83 1.6E-37 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 2.6E-47 T 25-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.0E-23 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.0E-23 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.0E-23 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 PIRSF PIRSF002144 1 92 3.7E-32 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APQ13_RS08420 7ecdc8fbb0572771730f46d7b5cac192 92 Gene3D G3DSA:3.30.860.10 1 91 1.0E-41 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 Gene3D G3DSA:1.10.390.10 302 450 1.2E-48 T 25-04-2016 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 3.6E-29 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 289 304 3.6E-29 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 320 3.6E-29 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 254 264 3.6E-29 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 3.6E-29 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 Pfam PF01433 Peptidase family M1 7 382 1.9E-126 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 SUPERFAMILY SSF55486 212 449 4.83E-78 T 25-04-2016 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 SUPERFAMILY SSF63737 10 191 1.57E-43 T 25-04-2016 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PANTHER PTHR11533:SF163 7 847 3.3E-244 T 25-04-2016 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 PANTHER PTHR11533 7 847 3.3E-244 T 25-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APQ13_RS02655 dd581178dc5792230a4ead9120bf1a78 849 Pfam PF11838 ERAP1-like C-terminal domain 514 826 2.9E-40 T 25-04-2016 IPR024571 ERAP1-like C-terminal domain APQ13_RS09395 e57fe32c12f2261055511d9c47af103d 127 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 68 1.6E-14 T 25-04-2016 IPR003849 Preprotein translocase YajC APQ13_RS09395 e57fe32c12f2261055511d9c47af103d 127 PANTHER PTHR33909:SF1 1 106 1.3E-17 T 25-04-2016 APQ13_RS09395 e57fe32c12f2261055511d9c47af103d 127 PANTHER PTHR33909 1 106 1.3E-17 T 25-04-2016 APQ13_RS09395 e57fe32c12f2261055511d9c47af103d 127 SMART SM01323 1 83 5.8E-28 T 25-04-2016 IPR003849 Preprotein translocase YajC APQ13_RS09395 e57fe32c12f2261055511d9c47af103d 127 Pfam PF02699 Preprotein translocase subunit 5 80 1.1E-19 T 25-04-2016 IPR003849 Preprotein translocase YajC APQ13_RS02920 47499184c95bc9717973d89b6dfa92ae 179 Pfam PF02441 Flavoprotein 3 133 1.5E-36 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 APQ13_RS02920 47499184c95bc9717973d89b6dfa92ae 179 PANTHER PTHR14359 3 179 4.8E-67 T 25-04-2016 APQ13_RS02920 47499184c95bc9717973d89b6dfa92ae 179 PANTHER PTHR14359:SF20 3 179 4.8E-67 T 25-04-2016 APQ13_RS02920 47499184c95bc9717973d89b6dfa92ae 179 SUPERFAMILY SSF52507 3 178 3.27E-55 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 APQ13_RS02920 47499184c95bc9717973d89b6dfa92ae 179 TIGRFAM TIGR02113 coaC_strep: phosphopantothenoylcysteine decarboxylase 3 178 1.8E-98 T 25-04-2016 IPR011847 Phosphopantothenoylcysteine decarboxylase KEGG: 00770+4.1.1.36|UniPathway: UPA00241 APQ13_RS02920 47499184c95bc9717973d89b6dfa92ae 179 Gene3D G3DSA:3.40.50.1950 3 178 1.4E-61 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 Pfam PF00347 Ribosomal protein L6 91 164 5.4E-18 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 Pfam PF00347 Ribosomal protein L6 12 82 1.1E-19 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 PANTHER PTHR11655 1 178 1.6E-85 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-73 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 Gene3D G3DSA:3.90.930.12 83 177 1.5E-37 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.2E-29 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.2E-29 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.2E-29 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 Gene3D G3DSA:3.90.930.12 2 82 1.9E-31 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 PIRSF PIRSF002162 1 177 2.6E-45 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 SUPERFAMILY SSF56053 83 177 1.31E-35 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 PANTHER PTHR11655:SF14 1 178 1.6E-85 T 25-04-2016 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.397 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 SUPERFAMILY SSF56053 1 82 1.44E-26 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08475 e6bf296d2da7be7d5a2a02466dc79fc2 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 25-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07415 ea8297c5d09c992306cf7e03981a7d89 184 SUPERFAMILY SSF53328 4 178 1.7E-53 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS07415 ea8297c5d09c992306cf7e03981a7d89 184 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 182 28.749 T 25-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APQ13_RS07415 ea8297c5d09c992306cf7e03981a7d89 184 Pfam PF00551 Formyl transferase 4 176 3.5E-48 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS07415 ea8297c5d09c992306cf7e03981a7d89 184 Gene3D G3DSA:3.40.50.170 3 179 3.8E-63 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APQ13_RS07415 ea8297c5d09c992306cf7e03981a7d89 184 PANTHER PTHR10520 4 179 6.2E-76 T 25-04-2016 APQ13_RS07415 ea8297c5d09c992306cf7e03981a7d89 184 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 179 3.3E-59 T 25-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 PIRSF PIRSF006488 1 73 5.1E-19 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 5 49 2.0E-18 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 14.582 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 PANTHER PTHR34137 1 73 2.9E-19 T 25-04-2016 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 Gene3D G3DSA:1.10.287.1040 3 70 5.0E-23 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 1.4E-22 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 Pfam PF02609 Exonuclease VII small subunit 8 57 2.5E-19 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05085 28dcb68b93eb79468f64914cb32db6ad 73 SUPERFAMILY SSF116842 2 70 5.23E-19 T 25-04-2016 APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 SMART SM00987 47 205 7.5E-35 T 25-04-2016 APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 SUPERFAMILY SSF52141 3 215 1.9E-85 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 216 38.537 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 4 208 8.7E-76 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 SMART SM00986 47 205 7.5E-35 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 Gene3D G3DSA:3.40.470.10 3 215 1.5E-91 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 25-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 Pfam PF03167 Uracil DNA glycosylase superfamily 52 204 5.6E-22 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02290 b435abd6197d60be20e84d643ab9e3c4 217 PANTHER PTHR11264 6 215 3.9E-113 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 ProSitePatterns PS00783 Ribosomal protein L13 signature. 107 129 - T 25-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 17 143 26.039 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 SUPERFAMILY SSF52161 6 144 2.62E-56 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 Gene3D G3DSA:3.90.1180.10 5 143 7.7E-61 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 Pfam PF00572 Ribosomal protein L13 16 140 6.5E-53 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 PIRSF PIRSF002181 1 147 3.3E-46 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 144 7.4E-58 T 25-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APQ13_RS06925 4ebe54bc634755909637e7aef6ea7b18 148 PANTHER PTHR11545 4 145 6.1E-68 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SUPERFAMILY SSF81923 151 176 2.22E-12 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SUPERFAMILY SSF81923 4 117 2.22E-12 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Gene3D G3DSA:1.10.8.60 376 450 7.9E-23 T 25-04-2016 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Gene3D G3DSA:3.40.50.300 704 731 2.8E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Gene3D G3DSA:3.40.50.300 497 670 2.8E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 669 6.1E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 6.1E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 611 6.1E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 6.1E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SUPERFAMILY SSF52540 193 483 3.71E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PANTHER PTHR11638:SF18 167 812 0.0 T 25-04-2016 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PANTHER PTHR11638:SF18 7 143 0.0 T 25-04-2016 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SUPERFAMILY SSF52540 493 803 2.39E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PANTHER PTHR11638 167 812 0.0 T 25-04-2016 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 PANTHER PTHR11638 7 143 0.0 T 25-04-2016 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SMART SM00382 544 684 8.1E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SMART SM00382 230 375 2.4E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Pfam PF07724 AAA domain (Cdc48 subfamily) 543 714 2.3E-53 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 55 0.0082 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 105 133 0.034 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Gene3D G3DSA:3.40.50.300 193 374 1.1E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 578 596 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Gene3D G3DSA:1.10.8.60 732 811 4.3E-28 T 25-04-2016 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Gene3D G3DSA:1.10.1780.10 3 137 4.1E-17 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 SMART SM01086 721 810 1.0E-33 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 326 338 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 235 366 4.9E-12 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS08380 76540c9ed161d7a8946db286b38c6776 813 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 721 801 9.5E-24 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS00210 21beecc30d5004915b9340831c864328 191 SUPERFAMILY SSF52317 4 171 2.14E-32 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS00210 21beecc30d5004915b9340831c864328 191 Gene3D G3DSA:3.40.50.880 4 172 1.0E-29 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS00210 21beecc30d5004915b9340831c864328 191 Pfam PF01965 DJ-1/PfpI family 5 166 5.5E-27 T 25-04-2016 IPR002818 DJ-1/PfpI APQ13_RS00210 21beecc30d5004915b9340831c864328 191 PANTHER PTHR11019 1 191 2.6E-18 T 25-04-2016 APQ13_RS00210 21beecc30d5004915b9340831c864328 191 PANTHER PTHR11019:SF4 1 191 2.6E-18 T 25-04-2016 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 SUPERFAMILY SSF56784 7 265 6.21E-61 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 287 464 1.1E-45 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 SUPERFAMILY SSF50891 415 467 9.79E-57 T 25-04-2016 IPR029000 Cyclophilin-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 SUPERFAMILY SSF50891 284 387 9.79E-57 T 25-04-2016 IPR029000 Cyclophilin-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 320 337 - T 25-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 Gene3D G3DSA:3.40.50.1000 3 82 1.7E-46 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 Gene3D G3DSA:3.40.50.1000 170 268 1.7E-46 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 234 6.2E-21 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 15 261 7.1E-49 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 261 2.3E-50 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 Gene3D G3DSA:2.40.100.10 275 468 1.2E-66 T 25-04-2016 IPR029000 Cyclophilin-like domain APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PANTHER PTHR11071:SF282 216 386 1.4E-92 T 25-04-2016 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PANTHER PTHR11071:SF282 411 470 1.4E-92 T 25-04-2016 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PANTHER PTHR11071 216 386 1.4E-92 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PANTHER PTHR11071 411 470 1.4E-92 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 325 337 2.5E-19 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 367 382 2.5E-19 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS05540 ae2d9aa0805fa90c5f8d516e48e532ef 471 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 299 314 2.5E-19 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS03995 64bd7ec607ae398c5b592c2337788ba9 269 PANTHER PTHR30413 7 269 1.5E-38 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APQ13_RS03995 64bd7ec607ae398c5b592c2337788ba9 269 PANTHER PTHR30413:SF8 7 269 1.5E-38 T 25-04-2016 APQ13_RS03995 64bd7ec607ae398c5b592c2337788ba9 269 Pfam PF01061 ABC-2 type transporter 12 222 5.3E-16 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APQ13_RS01920 ebc4bf2e558efcca85fbdc4807252378 392 SUPERFAMILY SSF103473 13 386 2.49E-61 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS01920 ebc4bf2e558efcca85fbdc4807252378 392 PANTHER PTHR23501 7 386 3.6E-48 T 25-04-2016 APQ13_RS01920 ebc4bf2e558efcca85fbdc4807252378 392 Gene3D G3DSA:1.20.1250.20 211 387 3.4E-16 T 25-04-2016 APQ13_RS01920 ebc4bf2e558efcca85fbdc4807252378 392 Gene3D G3DSA:1.20.1250.20 15 185 1.3E-31 T 25-04-2016 APQ13_RS01920 ebc4bf2e558efcca85fbdc4807252378 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APQ13_RS01920 ebc4bf2e558efcca85fbdc4807252378 392 Pfam PF07690 Major Facilitator Superfamily 17 353 3.2E-47 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 45.245 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Gene3D G3DSA:3.30.70.380 710 801 5.8E-30 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SUPERFAMILY SSF46955 410 480 4.21E-17 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Gene3D G3DSA:3.50.40.10 229 398 5.9E-77 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 709 801 1.1E-28 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 PANTHER PTHR10947:SF0 2 801 6.3E-284 T 25-04-2016 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 PANTHER PTHR10947 2 801 6.3E-284 T 25-04-2016 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SUPERFAMILY SSF55681 472 694 6.96E-46 T 25-04-2016 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Pfam PF01588 Putative tRNA binding domain 45 150 4.0E-19 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Gene3D G3DSA:3.30.930.10 493 694 5.3E-61 T 25-04-2016 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SMART SM00873 218 391 6.5E-86 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Gene3D G3DSA:3.30.56.20 410 480 7.6E-22 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SMART SM00874 408 476 7.3E-23 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Pfam PF03483 B3/4 domain 222 390 1.2E-64 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SUPERFAMILY SSF54991 703 801 1.7E-30 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SUPERFAMILY SSF56037 217 399 8.37E-67 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 8.0E-253 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Gene3D G3DSA:2.40.50.140 41 228 1.5E-50 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SMART SM00896 708 801 5.6E-41 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Pfam PF03484 tRNA synthetase B5 domain 411 476 5.3E-15 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 Gene3D G3DSA:3.30.56.10 1 38 1.2E-24 T 25-04-2016 APQ13_RS01005 e049cccdcec652fa3a99bd170167d907 801 SUPERFAMILY SSF50249 36 194 1.6E-43 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS05835 06898a3ab21aaad85a132ac9189260ef 98 PANTHER PTHR34215 1 94 2.7E-28 T 25-04-2016 APQ13_RS05835 06898a3ab21aaad85a132ac9189260ef 98 Gene3D G3DSA:3.30.1230.10 2 96 1.5E-30 T 25-04-2016 IPR007393 Domain of unknown function DUF448 APQ13_RS05835 06898a3ab21aaad85a132ac9189260ef 98 Pfam PF04296 Protein of unknown function (DUF448) 10 83 2.6E-21 T 25-04-2016 IPR007393 Domain of unknown function DUF448 APQ13_RS05835 06898a3ab21aaad85a132ac9189260ef 98 PANTHER PTHR34215:SF1 1 94 2.7E-28 T 25-04-2016 APQ13_RS05835 06898a3ab21aaad85a132ac9189260ef 98 SUPERFAMILY SSF64376 5 96 2.09E-26 T 25-04-2016 IPR007393 Domain of unknown function DUF448 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 SUPERFAMILY SSF63520 61 168 4.05E-26 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 PANTHER PTHR30185 1 276 1.0E-95 T 25-04-2016 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 Pfam PF00874 PRD domain 180 275 2.5E-20 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 Pfam PF00874 PRD domain 78 165 1.2E-21 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 Pfam PF03123 CAT RNA binding domain 1 54 4.1E-21 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 SUPERFAMILY SSF50151 1 53 9.29E-17 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 Gene3D G3DSA:1.10.1790.10 70 167 4.9E-26 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 Gene3D G3DSA:1.10.1790.10 177 277 7.7E-30 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 SMART SM01061 1 58 8.6E-22 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 Gene3D G3DSA:2.30.24.10 1 54 1.6E-21 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 PANTHER PTHR30185:SF2 1 276 1.0E-95 T 25-04-2016 APQ13_RS03330 ae288e08bfa538298aa03c2d8acba7fe 280 SUPERFAMILY SSF63520 179 276 1.96E-26 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS00430 af5c60dd72ef5e739ccff2b346d27516 157 PIRSF PIRSF021320 1 147 4.7E-68 T 25-04-2016 IPR009326 Protein of unknown function DUF984 APQ13_RS00430 af5c60dd72ef5e739ccff2b346d27516 157 SMART SM01022 24 144 2.9E-41 T 25-04-2016 IPR007374 ASCH domain APQ13_RS00430 af5c60dd72ef5e739ccff2b346d27516 157 Pfam PF04266 ASCH domain 24 144 8.7E-28 T 25-04-2016 IPR007374 ASCH domain APQ13_RS00430 af5c60dd72ef5e739ccff2b346d27516 157 SUPERFAMILY SSF88697 2 146 8.95E-55 T 25-04-2016 IPR015947 PUA-like domain APQ13_RS00430 af5c60dd72ef5e739ccff2b346d27516 157 PANTHER PTHR39203 1 147 3.3E-43 T 25-04-2016 APQ13_RS00430 af5c60dd72ef5e739ccff2b346d27516 157 Gene3D G3DSA:3.10.400.10 1 146 2.8E-61 T 25-04-2016 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Gene3D G3DSA:1.10.10.650 2 107 1.4E-38 T 25-04-2016 IPR023319 Tex-like protein, HTH domain APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Pfam PF16921 Tex protein YqgF-like domain 307 433 6.9E-53 T 25-04-2016 IPR032639 Tex protein, YqgF-like domain APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Gene3D G3DSA:1.10.150.310 481 612 3.5E-44 T 25-04-2016 IPR023097 Tex RuvX-like domain APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SMART SM00732 307 406 1.5E-36 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Pfam PF12836 Helix-hairpin-helix motif 473 537 4.1E-26 T 25-04-2016 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SUPERFAMILY SSF47781 542 614 1.22E-16 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SUPERFAMILY SSF53098 303 451 1.69E-47 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Gene3D G3DSA:3.30.420.140 307 432 9.3E-50 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 PANTHER PTHR10724 2 706 1.6E-303 T 25-04-2016 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SUPERFAMILY SSF158832 2 302 3.14E-98 T 25-04-2016 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Gene3D G3DSA:2.40.50.140 621 704 1.0E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Pfam PF00575 S1 RNA binding domain 630 701 1.4E-14 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Pfam PF09371 Tex-like protein N-terminal domain 7 188 1.9E-60 T 25-04-2016 IPR018974 Tex-like protein, N-terminal APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SMART SM00316 631 702 4.3E-23 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 PANTHER PTHR10724:SF1 2 706 1.6E-303 T 25-04-2016 APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SUPERFAMILY SSF50249 618 703 1.12E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Gene3D G3DSA:1.10.3500.10 433 480 2.2E-86 T 25-04-2016 IPR023323 Tex-like domain APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 Gene3D G3DSA:1.10.3500.10 108 303 2.2E-86 T 25-04-2016 IPR023323 Tex-like domain APQ13_RS04345 874f9cac9b45539e61b45c91b239a242 708 SUPERFAMILY SSF47781 452 540 1.63E-25 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 179 21.132 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 Gene3D G3DSA:3.30.70.940 7 119 3.3E-43 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 SMART SM00738 6 117 5.7E-49 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 Pfam PF02357 Transcription termination factor nusG 7 114 4.7E-27 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 Gene3D G3DSA:2.30.30.30 124 178 1.4E-16 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 177 5.8E-47 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 SMART SM00739 127 154 8.1E-6 T 25-04-2016 IPR005824 KOW APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 SUPERFAMILY SSF82679 7 118 7.06E-36 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 7.7E-8 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 PRINTS PR00338 Transcription termination factor NUSG signature 155 171 7.7E-8 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 PANTHER PTHR30265 2 179 1.9E-60 T 25-04-2016 APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 SUPERFAMILY SSF50104 117 177 9.89E-13 T 25-04-2016 IPR008991 Translation protein SH3-like domain APQ13_RS08800 1111c349b9487ad680049ffe366be4fd 179 Pfam PF00467 KOW motif 130 160 5.6E-7 T 25-04-2016 IPR005824 KOW APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.797 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 PANTHER PTHR20919:SF0 2 313 8.0E-145 T 25-04-2016 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.8E-134 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 4.2E-126 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 PANTHER PTHR20919 2 313 8.0E-145 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-151 T 25-04-2016 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 SUPERFAMILY SSF52317 17 297 7.44E-96 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 PIRSF PIRSF000450 1 309 1.1E-151 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APQ13_RS01175 9806c63bcb069dbb822b766086637be7 314 Gene3D G3DSA:3.40.50.880 34 300 1.6E-117 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 PANTHER PTHR24421 13 361 7.7E-58 T 25-04-2016 APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 Gene3D G3DSA:3.30.565.10 248 332 3.5E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 328 2.5E-6 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 SUPERFAMILY SSF55874 248 363 2.49E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 PANTHER PTHR24421:SF10 13 361 7.7E-58 T 25-04-2016 APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 SMART SM00387 279 367 4.5E-4 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00825 95e445afea0c880e6e307a578b453f10 369 Pfam PF07730 Histidine kinase 179 243 3.0E-17 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 Gene3D G3DSA:3.30.70.600 3 102 9.0E-44 T 25-04-2016 IPR027486 Ribosomal protein S10 domain APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 SUPERFAMILY SSF54999 5 102 4.45E-37 T 25-04-2016 IPR027486 Ribosomal protein S10 domain APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 PANTHER PTHR11700 1 102 8.0E-50 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.6E-44 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 25-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 SMART SM01403 7 101 6.8E-56 T 25-04-2016 IPR027486 Ribosomal protein S10 domain APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.641 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.8E-35 T 25-04-2016 IPR027486 Ribosomal protein S10 domain APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.0E-19 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.0E-19 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08395 ac204ceb52541b64ab2c59af485de2b6 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.0E-19 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 SUPERFAMILY SSF53067 1 195 9.06E-62 T 25-04-2016 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 SUPERFAMILY SSF53067 156 396 1.02E-86 T 25-04-2016 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 25-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PRINTS PR00471 Acetate kinase family signature 302 315 1.1E-41 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PRINTS PR00471 Acetate kinase family signature 203 224 1.1E-41 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PRINTS PR00471 Acetate kinase family signature 4 15 1.1E-41 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PRINTS PR00471 Acetate kinase family signature 378 390 1.1E-41 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PRINTS PR00471 Acetate kinase family signature 173 186 1.1E-41 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PRINTS PR00471 Acetate kinase family signature 324 340 1.1E-41 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PANTHER PTHR21060 1 396 9.1E-190 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 25-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 Gene3D G3DSA:3.30.420.40 3 204 8.3E-10 T 25-04-2016 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 Pfam PF00871 Acetokinase family 5 391 5.5E-145 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 4.9E-151 T 25-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 Gene3D G3DSA:3.30.420.40 205 396 1.6E-74 T 25-04-2016 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PIRSF PIRSF000722 1 399 4.9E-143 T 25-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 177.602 T 25-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APQ13_RS08660 bd818fdfd841d0fadab95a9da5264cae 399 PANTHER PTHR21060:SF11 1 396 9.1E-190 T 25-04-2016 APQ13_RS04530 673beaa31c459d991cdd298fa1c1297b 327 SUPERFAMILY SSF55846 160 303 4.89E-29 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APQ13_RS04530 673beaa31c459d991cdd298fa1c1297b 327 Gene3D G3DSA:3.40.80.10 163 300 1.5E-7 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APQ13_RS04530 673beaa31c459d991cdd298fa1c1297b 327 SMART SM00644 153 296 4.7E-25 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APQ13_RS04530 673beaa31c459d991cdd298fa1c1297b 327 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 166 295 3.9E-6 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APQ13_RS05305 7c2fa80609e3486a48d0fd2b6f51b637 98 Pfam PF01817 Chorismate mutase type II 8 86 1.2E-18 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS05305 7c2fa80609e3486a48d0fd2b6f51b637 98 SUPERFAMILY SSF48600 1 88 5.8E-22 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS05305 7c2fa80609e3486a48d0fd2b6f51b637 98 Gene3D G3DSA:1.20.59.10 2 86 2.0E-15 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS05305 7c2fa80609e3486a48d0fd2b6f51b637 98 SMART SM00830 8 89 4.1E-25 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 361 371 - T 25-04-2016 IPR025660 Cysteine peptidase, histidine active site APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 Gene3D G3DSA:3.90.70.10 51 443 1.5E-171 T 25-04-2016 APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 PANTHER PTHR10363 4 444 1.7E-262 T 25-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 PIRSF PIRSF005700 1 444 1.6E-176 T 25-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 SUPERFAMILY SSF54001 8 443 1.51E-125 T 25-04-2016 APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 PANTHER PTHR10363:SF4 4 444 1.7E-262 T 25-04-2016 APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 63 74 - T 25-04-2016 IPR000169 Cysteine peptidase, cysteine active site APQ13_RS05640 58bd670c3b2ad0df8fe0dc5f9b1844d8 444 Pfam PF03051 Peptidase C1-like family 4 440 1.2E-205 T 25-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Gene3D G3DSA:2.40.30.10 202 298 1.5E-22 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PANTHER PTHR23115 406 605 1.7E-290 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PANTHER PTHR23115 1 382 1.7E-290 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PANTHER PTHR23115:SF175 406 605 1.7E-290 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PANTHER PTHR23115:SF175 1 382 1.7E-290 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 1.8E-52 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 SUPERFAMILY SSF54980 408 503 6.23E-26 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 SMART SM00838 407 495 7.5E-5 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 183 1.5E-19 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 2.0E-50 T 25-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Pfam PF00679 Elongation factor G C-terminus 408 495 1.0E-24 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Gene3D G3DSA:3.30.70.870 301 378 2.5E-28 T 25-04-2016 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Gene3D G3DSA:3.30.70.240 410 499 1.5E-24 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 SUPERFAMILY SSF54980 301 379 9.71E-21 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 SUPERFAMILY SSF50447 175 297 6.24E-30 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 307.47 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Pfam PF03144 Elongation factor Tu domain 2 214 284 7.2E-8 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 SUPERFAMILY SSF52540 9 214 1.37E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Gene3D G3DSA:3.40.50.300 6 201 8.4E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01490 7da5067dd6ffd5cd0c7464ca4da98324 611 Pfam PF14492 Elongation Factor G, domain II 301 374 8.6E-7 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 497 7.2E-232 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 782 19.185 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SUPERFAMILY SSF52540 13 226 5.32E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SUPERFAMILY SSF52540 349 396 5.32E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SMART SM00958 227 339 2.3E-55 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Gene3D G3DSA:1.10.3060.10 601 781 4.0E-50 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SUPERFAMILY SSF81886 573 826 7.85E-73 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Pfam PF07517 SecA DEAD-like domain 10 383 8.4E-126 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Gene3D G3DSA:3.90.1440.10 230 349 1.8E-42 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 394 407 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 99 113 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 357 374 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 168 188 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 61 85 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 115 125 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PRINTS PR00906 SecA protein signature 320 342 4.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SUPERFAMILY SSF52540 397 567 4.07E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 ProSitePatterns PS01312 SecA family signature. 481 496 - T 25-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Pfam PF07516 SecA Wing and Scaffold domain 571 779 6.7E-56 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SMART SM00957 5 383 5.4E-264 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Gene3D G3DSA:3.40.50.300 398 567 4.9E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 PANTHER PTHR30612 1 839 0.0 T 25-04-2016 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Gene3D G3DSA:3.40.50.300 10 226 3.3E-114 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Gene3D G3DSA:3.40.50.300 350 397 3.3E-114 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Pfam PF02810 SEC-C motif 818 836 5.7E-9 T 25-04-2016 IPR004027 SEC-C motif APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 Pfam PF01043 SecA preprotein cross-linking domain 231 339 2.7E-34 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APQ13_RS09220 2622a9f147503c6a189874dd48d2d8a1 839 SUPERFAMILY SSF81767 231 349 1.27E-40 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 PANTHER PTHR11911:SF104 1 196 6.2E-48 T 25-04-2016 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 Gene3D G3DSA:3.10.580.10 1 132 3.8E-34 T 25-04-2016 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 Pfam PF00571 CBS domain 77 131 7.7E-12 T 25-04-2016 IPR000644 CBS domain APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 Pfam PF00571 CBS domain 3 55 4.8E-14 T 25-04-2016 IPR000644 CBS domain APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 PANTHER PTHR11911 1 196 6.2E-48 T 25-04-2016 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 SUPERFAMILY SSF55021 141 207 3.97E-6 T 25-04-2016 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 Gene3D G3DSA:3.30.70.260 141 200 2.2E-10 T 25-04-2016 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 SUPERFAMILY SSF54631 1 132 4.39E-35 T 25-04-2016 APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 SMART SM00116 84 131 1.1E-12 T 25-04-2016 IPR000644 CBS domain APQ13_RS00300 198416f909d495ad007ac6eff514a44f 219 SMART SM00116 10 57 1.0E-9 T 25-04-2016 IPR000644 CBS domain APQ13_RS06215 ddd49096fce997cd66fbe79a32a72c44 200 Pfam PF06197 Protein of unknown function (DUF998) 11 195 6.9E-29 T 25-04-2016 IPR009339 Protein of unknown function DUF998 APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 SUPERFAMILY SSF111331 5 307 1.53E-74 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 PANTHER PTHR12358:SF41 5 314 1.6E-127 T 25-04-2016 APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 132 1.3E-33 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 PANTHER PTHR12358 5 314 1.6E-127 T 25-04-2016 APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 SMART SM00046 7 138 1.3E-7 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 Gene3D G3DSA:3.40.50.10330 34 99 1.3E-6 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APQ13_RS00850 f24c16c49730a7900eff28192c766a72 347 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 301 2.6E-74 T 25-04-2016 IPR005218 Diacylglycerol/lipid kinase APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 PANTHER PTHR24220:SF470 5 230 1.6E-126 T 25-04-2016 APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 Pfam PF00005 ABC transporter 20 167 3.6E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 Gene3D G3DSA:3.40.50.300 2 222 3.3E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 PANTHER PTHR24220 5 230 1.6E-126 T 25-04-2016 APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 SUPERFAMILY SSF52540 3 225 3.33E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 SMART SM00382 29 223 3.4E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01740 051ca6b72cd608bc1939692029502da7 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 2.4E-91 T 25-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 APQ13_RS06475 7a52a1d6e7501f15c7cc060a0694f8f9 140 SUPERFAMILY SSF55804 8 134 4.32E-13 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS06475 7a52a1d6e7501f15c7cc060a0694f8f9 140 Gene3D G3DSA:3.40.930.10 9 133 4.4E-16 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06475 7a52a1d6e7501f15c7cc060a0694f8f9 140 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 133 5.0E-14 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 PANTHER PTHR23416 5 186 2.5E-76 T 25-04-2016 APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 149 2.7E-6 T 25-04-2016 IPR001451 Hexapeptide repeat APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 PIRSF PIRSF000441 2 199 1.7E-67 T 25-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 SUPERFAMILY SSF51161 4 174 6.24E-51 T 25-04-2016 IPR011004 Trimeric LpxA-like APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 Gene3D G3DSA:1.10.3130.10 5 59 3.5E-20 T 25-04-2016 APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 Gene3D G3DSA:2.160.10.10 60 192 1.1E-31 T 25-04-2016 APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 PANTHER PTHR23416:SF55 5 186 2.5E-76 T 25-04-2016 APQ13_RS06985 557fff8abd41278772a55a5f7d4bb080 205 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 165 2.8E-67 T 25-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:3.30.420.40 289 331 5.5E-34 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:3.30.420.40 165 199 5.5E-34 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 53 61 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 172 182 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 304 320 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 358 377 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 335 355 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 439 455 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PRINTS PR00301 70kDa heat shock protein signature 112 132 4.2E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:1.20.1270.10 502 573 6.6E-18 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 3.1E-282 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 SUPERFAMILY SSF100934 477 576 7.98E-11 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 SUPERFAMILY SSF53067 160 351 3.33E-65 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PANTHER PTHR19375 2 611 0.0 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 SUPERFAMILY SSF100920 354 510 9.29E-61 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 612 36.154 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:3.30.420.40 3 38 2.9E-58 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:3.30.420.40 99 164 2.9E-58 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:2.60.34.10 360 501 7.6E-71 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Pfam PF00012 Hsp70 protein 4 74 1.2E-24 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Pfam PF00012 Hsp70 protein 76 573 8.0E-215 T 25-04-2016 IPR013126 Heat shock protein 70 family APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 PANTHER PTHR19375:SF173 2 611 0.0 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:3.90.640.10 200 285 4.8E-30 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 Gene3D G3DSA:3.30.30.30 39 98 4.7E-12 T 25-04-2016 APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site APQ13_RS07235 49c1ea70b9604a41ad56231e0e052b41 612 SUPERFAMILY SSF53067 1 157 4.86E-56 T 25-04-2016 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 Gene3D G3DSA:3.40.720.10 3 107 2.7E-70 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 Gene3D G3DSA:3.40.720.10 230 401 2.7E-70 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 SUPERFAMILY SSF53649 3 108 5.71E-82 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 SUPERFAMILY SSF53649 227 402 5.71E-82 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 PANTHER PTHR21110:SF0 5 403 1.2E-144 T 25-04-2016 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 Gene3D G3DSA:3.30.70.1250 108 226 2.8E-52 T 25-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 SUPERFAMILY SSF143856 108 226 1.96E-47 T 25-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 PIRSF PIRSF001491 3 403 1.4E-148 T 25-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 Pfam PF01676 Metalloenzyme superfamily 6 390 2.4E-39 T 25-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 Hamap MF_00740 Phosphopentomutase [deoB]. 4 399 53.229 T 25-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 PANTHER PTHR21110 5 403 1.2E-144 T 25-04-2016 APQ13_RS02205 811859539495669a3c9d02b1b1e8c62b 403 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 396 8.1E-156 T 25-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APQ13_RS01290 d6fd7c37ef9fa9edf5a89fa797281b37 232 Gene3D G3DSA:3.40.390.10 70 230 7.3E-20 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APQ13_RS01290 d6fd7c37ef9fa9edf5a89fa797281b37 232 SUPERFAMILY SSF55486 49 230 1.61E-25 T 25-04-2016 APQ13_RS01290 d6fd7c37ef9fa9edf5a89fa797281b37 232 Pfam PF00413 Matrixin 100 231 3.9E-9 T 25-04-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 APQ13_RS05255 5a164b183976885c3279d915d93c874f 68 SUPERFAMILY SSF158379 1 62 5.1E-25 T 25-04-2016 IPR023164 YqgQ-like domain APQ13_RS05255 5a164b183976885c3279d915d93c874f 68 Gene3D G3DSA:1.10.287.760 1 66 1.4E-34 T 25-04-2016 IPR023164 YqgQ-like domain APQ13_RS05255 5a164b183976885c3279d915d93c874f 68 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 61 1.4E-30 T 25-04-2016 IPR009256 Protein of unknown function DUF910 APQ13_RS05255 5a164b183976885c3279d915d93c874f 68 PANTHER PTHR41311 1 67 1.1E-18 T 25-04-2016 APQ13_RS02545 f6ad3c629442e7e2c8c31f247012c428 143 SUPERFAMILY SSF55729 1 135 2.45E-22 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS02545 f6ad3c629442e7e2c8c31f247012c428 143 Pfam PF00583 Acetyltransferase (GNAT) family 49 132 1.4E-10 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS02545 f6ad3c629442e7e2c8c31f247012c428 143 PANTHER PTHR23091 1 135 1.4E-13 T 25-04-2016 APQ13_RS02545 f6ad3c629442e7e2c8c31f247012c428 143 Gene3D G3DSA:3.40.630.30 1 142 7.3E-25 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 SUPERFAMILY SSF52540 3 231 5.19E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 SMART SM00382 28 230 3.3E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 Pfam PF00005 ABC transporter 19 171 5.1E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 244 2.4E-109 T 25-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 PANTHER PTHR24220:SF85 5 255 2.3E-130 T 25-04-2016 APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 Gene3D G3DSA:3.40.50.300 3 235 2.0E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06650 233510984eda5c826a80cedca5b9cdd4 256 PANTHER PTHR24220 5 255 2.3E-130 T 25-04-2016 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 Gene3D G3DSA:3.40.50.300 531 760 5.6E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 SUPERFAMILY SSF52540 526 762 4.99E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 ProSitePatterns PS00211 ABC transporters family signature. 668 682 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 Pfam PF00664 ABC transporter transmembrane region 215 484 7.9E-54 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 PANTHER PTHR24221 186 763 3.7E-168 T 25-04-2016 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 Gene3D G3DSA:3.90.70.10 59 188 5.8E-13 T 25-04-2016 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 SUPERFAMILY SSF90123 197 509 7.46E-62 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 Pfam PF00005 ABC transporter 547 696 2.9E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 58 763 0.0 T 25-04-2016 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 KEGG: 00900+3.4.22.- APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 Gene3D G3DSA:1.20.1560.10 205 508 2.5E-69 T 25-04-2016 APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 SMART SM00382 556 741 1.6E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS09035 0d1c079fba3071b4f3eb771318a1a39f 763 Pfam PF03412 Peptidase C39 family 53 189 1.0E-38 T 25-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APQ13_RS04795 0ca4a979d748e84175fca2f9f935d1e6 235 SUPERFAMILY SSF53335 2 224 9.04E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04795 0ca4a979d748e84175fca2f9f935d1e6 235 Pfam PF01596 O-methyltransferase 37 226 5.2E-31 T 25-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 APQ13_RS04795 0ca4a979d748e84175fca2f9f935d1e6 235 Gene3D G3DSA:3.40.50.150 8 226 1.1E-56 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04795 0ca4a979d748e84175fca2f9f935d1e6 235 PANTHER PTHR10509 13 231 5.8E-66 T 25-04-2016 APQ13_RS04795 0ca4a979d748e84175fca2f9f935d1e6 235 PANTHER PTHR10509:SF14 13 231 5.8E-66 T 25-04-2016 APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 SUPERFAMILY SSF52833 38 128 2.49E-15 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 Gene3D G3DSA:1.20.1050.10 129 253 2.0E-40 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 PANTHER PTHR11260 16 262 2.2E-94 T 25-04-2016 APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 SUPERFAMILY SSF47616 179 257 1.13E-31 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 SUPERFAMILY SSF47616 115 150 1.13E-31 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 Gene3D G3DSA:3.40.30.10 31 128 1.2E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 PANTHER PTHR11260:SF258 16 262 2.2E-94 T 25-04-2016 APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 Pfam PF13410 Glutathione S-transferase, C-terminal domain 175 244 2.5E-8 T 25-04-2016 APQ13_RS01870 b41edc0f75ab1185c785314d5864025d 263 Pfam PF02798 Glutathione S-transferase, N-terminal domain 43 124 4.8E-5 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 SUPERFAMILY SSF100950 75 235 1.33E-30 T 25-04-2016 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 Pfam PF00455 DeoR C terminal sensor domain 76 233 4.8E-47 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 PANTHER PTHR30363 1 246 4.0E-121 T 25-04-2016 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-11 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-11 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 25-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 PANTHER PTHR30363:SF10 1 246 4.0E-121 T 25-04-2016 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.3E-22 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 SUPERFAMILY SSF46785 4 66 1.0E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 Gene3D G3DSA:1.10.10.10 8 77 7.7E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 SMART SM00420 6 58 3.3E-23 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 SMART SM01134 74 235 9.9E-59 T 25-04-2016 APQ13_RS01030 6ec2a1f5e9dd9778acf3cc46cac961ef 251 Gene3D G3DSA:3.40.50.1360 78 215 2.4E-9 T 25-04-2016 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 PANTHER PTHR11468:SF3 26 797 0.0 T 25-04-2016 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 Gene3D G3DSA:3.40.50.2000 467 780 5.1E-125 T 25-04-2016 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 SUPERFAMILY SSF53756 3 797 1.96E-277 T 25-04-2016 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 PIRSF PIRSF000460 2 798 4.5E-201 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 Pfam PF00343 Carbohydrate phosphorylase 94 796 9.9E-288 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 796 0.0 T 25-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 PANTHER PTHR11468 26 797 0.0 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APQ13_RS00885 5d15289cb297fbc8f8a06376ac677bef 798 Gene3D G3DSA:3.40.50.2000 2 466 1.5E-166 T 25-04-2016 APQ13_RS01360 328da265e01139a59b712c24077dcac2 357 PANTHER PTHR11516:SF25 8 357 3.8E-148 T 25-04-2016 APQ13_RS01360 328da265e01139a59b712c24077dcac2 357 Gene3D G3DSA:3.40.50.970 20 357 6.9E-128 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01360 328da265e01139a59b712c24077dcac2 357 PANTHER PTHR11516 8 357 3.8E-148 T 25-04-2016 APQ13_RS01360 328da265e01139a59b712c24077dcac2 357 SUPERFAMILY SSF52518 27 357 5.89E-102 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01360 328da265e01139a59b712c24077dcac2 357 Pfam PF00676 Dehydrogenase E1 component 51 347 1.0E-91 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 Gene3D G3DSA:3.90.470.20 1 116 4.6E-32 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 6 98 2.6E-18 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 116 6.7E-23 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 22.046 T 25-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 116 7.0E-58 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 117 2.2E-23 T 25-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS09230 c177f196affa2a84ced4d6f66cabf258 119 SUPERFAMILY SSF56214 1 116 3.4E-31 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 PANTHER PTHR11766 1 415 5.0E-206 T 25-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 417 1.4E-132 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 SMART SM00363 352 414 2.6E-4 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 Pfam PF00579 tRNA synthetases class I (W and Y) 29 322 4.9E-83 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 Gene3D G3DSA:3.40.50.620 3 231 5.0E-104 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 Gene3D G3DSA:3.10.290.10 316 418 7.4E-31 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 Gene3D G3DSA:1.10.240.10 232 315 6.9E-42 T 25-04-2016 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 2.2E-28 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.2E-28 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 2.2E-28 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 2.2E-28 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 SUPERFAMILY SSF52374 2 322 4.3E-110 T 25-04-2016 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 Pfam PF01479 S4 domain 357 399 1.7E-7 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 SUPERFAMILY SSF55174 321 417 1.96E-22 T 25-04-2016 APQ13_RS08595 cafd6eb1148510f79c70cef73793da89 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.529 T 25-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Gene3D G3DSA:3.30.300.30 406 512 7.8E-25 T 25-04-2016 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 SUPERFAMILY SSF56801 12 512 1.57E-113 T 25-04-2016 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 PANTHER PTHR24095 8 503 3.4E-152 T 25-04-2016 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 34 435 3.7E-106 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Pfam PF00501 AMP-binding enzyme 17 411 2.0E-80 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Gene3D G3DSA:3.40.50.980 13 162 1.4E-29 T 25-04-2016 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 8 515 7.8E-234 T 25-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 503 3.9E-8 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Gene3D G3DSA:2.30.38.10 327 399 1.4E-17 T 25-04-2016 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 515 278.849 T 25-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 APQ13_RS00175 65ae814f5bda7547922567e49eb85687 516 Gene3D G3DSA:3.40.50.980 163 317 1.4E-37 T 25-04-2016 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 SMART SM00642 4 392 1.1E-68 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 PANTHER PTHR10357:SF168 131 482 4.0E-142 T 25-04-2016 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 PANTHER PTHR10357:SF168 3 109 4.0E-142 T 25-04-2016 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 Pfam PF00128 Alpha amylase, catalytic domain 30 375 2.6E-28 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 PIRSF PIRSF001021 1 486 3.2E-226 T 25-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 Gene3D G3DSA:3.20.20.80 2 398 1.3E-69 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 Gene3D G3DSA:2.60.40.1180 399 483 2.2E-33 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 Pfam PF09154 Domain of unknown function (DUF1939) 430 480 1.6E-4 T 25-04-2016 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 PANTHER PTHR10357 131 482 4.0E-142 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 PANTHER PTHR10357 3 109 4.0E-142 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 SUPERFAMILY SSF51445 4 376 9.99E-98 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS00635 8183e9489da2cf4c7a878e145abf9059 486 SUPERFAMILY SSF51011 395 483 1.12E-33 T 25-04-2016 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 7.9E-88 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 Gene3D G3DSA:3.20.20.105 4 372 4.4E-161 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 PANTHER PTHR21148 1 371 1.8E-172 T 25-04-2016 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 373 4.2E-162 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 373 1.2E-170 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 SUPERFAMILY SSF51713 9 371 5.62E-153 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 PANTHER PTHR21148:SF26 1 371 1.8E-172 T 25-04-2016 APQ13_RS06390 b446ba4a34775428f387a6622cd5f413 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 365 55.947 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 PANTHER PTHR11059 2 551 2.2E-160 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 SUPERFAMILY SSF52540 302 506 1.59E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 SUPERFAMILY SSF52540 2 50 1.59E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 SUPERFAMILY SSF52540 1 219 5.43E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 510 9.5E-18 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 Gene3D G3DSA:3.40.50.300 1 208 2.7E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 3.5E-160 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 Gene3D G3DSA:3.40.50.300 427 507 6.0E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05065 89db3271fa588e42b1e6c8dc5495960c 552 PIRSF PIRSF003128 1 552 1.5E-167 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APQ13_RS03345 df2530af0738beebbc9570b10ad3ece5 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 259 7.3E-12 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03345 df2530af0738beebbc9570b10ad3ece5 264 PANTHER PTHR30193 7 264 7.7E-98 T 25-04-2016 APQ13_RS03345 df2530af0738beebbc9570b10ad3ece5 264 Gene3D G3DSA:1.10.3720.10 4 260 2.9E-46 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03345 df2530af0738beebbc9570b10ad3ece5 264 PANTHER PTHR30193:SF10 7 264 7.7E-98 T 25-04-2016 APQ13_RS03345 df2530af0738beebbc9570b10ad3ece5 264 SUPERFAMILY SSF161098 2 259 3.55E-50 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS01185 d244fc676466a56ab80d4690fd70272a 232 PANTHER PTHR38451 6 232 9.8E-70 T 25-04-2016 APQ13_RS01185 d244fc676466a56ab80d4690fd70272a 232 SUPERFAMILY SSF53335 12 112 6.16E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS01185 d244fc676466a56ab80d4690fd70272a 232 Gene3D G3DSA:3.40.50.150 19 158 1.3E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS01185 d244fc676466a56ab80d4690fd70272a 232 PIRSF PIRSF018637 8 232 3.8E-73 T 25-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 APQ13_RS01185 d244fc676466a56ab80d4690fd70272a 232 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 27 227 1.3E-79 T 25-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 Gene3D G3DSA:3.40.190.10 162 343 3.7E-37 T 25-04-2016 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 Pfam PF01547 Bacterial extracellular solute-binding protein 45 338 1.2E-41 T 25-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 SUPERFAMILY SSF53850 21 416 1.68E-69 T 25-04-2016 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 Gene3D G3DSA:3.40.190.10 46 161 1.5E-22 T 25-04-2016 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 25-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 PANTHER PTHR30061:SF1 1 358 5.8E-64 T 25-04-2016 APQ13_RS03745 90b8d72ca1d657924c6562651ae5c0ad 420 PANTHER PTHR30061 1 358 5.8E-64 T 25-04-2016 APQ13_RS07845 660b16372c77b612f20e14b99e44cd77 253 Gene3D G3DSA:3.40.50.1580 25 247 1.2E-41 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS07845 660b16372c77b612f20e14b99e44cd77 253 SUPERFAMILY SSF53167 1 253 1.7E-50 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS07845 660b16372c77b612f20e14b99e44cd77 253 Pfam PF01048 Phosphorylase superfamily 62 225 3.2E-20 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Gene3D G3DSA:3.40.50.300 289 305 1.3E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Gene3D G3DSA:3.40.50.300 62 252 1.3E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 406 3.8E-194 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 SUPERFAMILY SSF57716 11 46 2.85E-11 T 25-04-2016 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 SMART SM00382 110 260 2.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Gene3D G3DSA:1.10.8.60 311 408 8.2E-38 T 25-04-2016 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 PANTHER PTHR11262 4 406 9.3E-233 T 25-04-2016 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 305 5.9E-49 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 SMART SM00994 10 49 7.8E-22 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 410 52.186 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 SMART SM01086 312 406 5.0E-34 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 PANTHER PTHR11262:SF4 4 406 9.3E-233 T 25-04-2016 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.3E-17 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 SUPERFAMILY SSF52540 59 387 6.93E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03455 ff79136aa9d0c2915fe87a6c6e43ff39 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 388 1.4E-18 T 25-04-2016 IPR019489 Clp ATPase, C-terminal APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 Pfam PF04260 Protein of unknown function (DUF436) 11 179 1.4E-70 T 25-04-2016 IPR006340 Protein of unknown function DUF436 APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 Hamap MF_00800 UPF0340 protein . 1 187 93.689 T 25-04-2016 IPR006340 Protein of unknown function DUF436 APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 9 179 1.2E-76 T 25-04-2016 IPR006340 Protein of unknown function DUF436 APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 SUPERFAMILY SSF110710 4 186 3.66E-77 T 25-04-2016 APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 PIRSF PIRSF007510 1 182 6.9E-87 T 25-04-2016 IPR006340 Protein of unknown function DUF436 APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 26 186 2.0E-87 T 25-04-2016 IPR006340 Protein of unknown function DUF436 APQ13_RS07210 e4b16ac79491e2e261b26862f222b5db 187 Gene3D G3DSA:3.40.50.10360 4 186 1.0E-80 T 25-04-2016 IPR006340 Protein of unknown function DUF436 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 SUPERFAMILY SSF52172 1 179 1.18E-36 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 4.2E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 SMART SM00448 2 111 6.6E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 Pfam PF00072 Response regulator receiver domain 4 111 6.3E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 Gene3D G3DSA:1.10.10.10 124 218 2.9E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 SMART SM00862 144 218 1.3E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 Gene3D G3DSA:3.40.50.2300 2 122 2.3E-34 T 25-04-2016 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 PANTHER PTHR26402:SF556 2 219 1.2E-74 T 25-04-2016 APQ13_RS04740 4ed3e239d2cd6af74531c264c5813b09 219 PANTHER PTHR26402 2 219 1.2E-74 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 PIRSF PIRSF001604 1 652 2.3E-238 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 306 2.2E-114 T 25-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SMART SM00278 466 485 7.3 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SMART SM00278 530 549 210.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SMART SM00278 432 451 250.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SUPERFAMILY SSF47781 391 571 6.3E-57 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Hamap MF_01588 DNA ligase [ligA]. 1 652 48.384 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SUPERFAMILY SSF56091 2 306 2.08E-111 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SMART SM00292 579 652 3.5E-7 T 25-04-2016 IPR001357 BRCT domain APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 319 334 - T 25-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SUPERFAMILY SSF52113 579 651 1.66E-17 T 25-04-2016 IPR001357 BRCT domain APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Gene3D G3DSA:3.40.50.10190 579 651 1.9E-22 T 25-04-2016 IPR001357 BRCT domain APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Gene3D G3DSA:3.30.470.30 113 239 2.0E-43 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Gene3D G3DSA:2.40.50.140 308 379 2.1E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Gene3D G3DSA:1.10.150.20 421 489 3.7E-26 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 310 385 1.3E-33 T 25-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Gene3D G3DSA:1.10.287.610 2 63 1.6E-24 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Gene3D G3DSA:1.10.150.20 490 570 2.8E-22 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SUPERFAMILY SSF50249 306 386 1.88E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 582 650 3.5E-12 T 25-04-2016 IPR001357 BRCT domain APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 395 420 1.1E-8 T 25-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 PANTHER PTHR23389:SF9 1 510 4.2E-177 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 109 138 - T 25-04-2016 IPR018239 NAD-dependent DNA ligase, active site APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 8 647 1.7E-236 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Pfam PF12826 Helix-hairpin-helix motif 496 558 1.8E-19 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 SMART SM00532 2 434 3.6E-231 T 25-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 PANTHER PTHR23389 1 510 4.2E-177 T 25-04-2016 APQ13_RS00845 929857ddbfaaf1c2e74914a716e40436 652 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.5E-5 T 25-04-2016 APQ13_RS07025 6eecdff2bd346e04485655594a63800a 198 PANTHER PTHR37314:SF2 10 190 8.9E-25 T 25-04-2016 APQ13_RS07025 6eecdff2bd346e04485655594a63800a 198 Pfam PF06912 Protein of unknown function (DUF1275) 31 192 2.0E-24 T 25-04-2016 IPR010699 Protein of unknown function DUF1275 APQ13_RS07025 6eecdff2bd346e04485655594a63800a 198 PANTHER PTHR37314 10 190 8.9E-25 T 25-04-2016 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 SUPERFAMILY SSF53686 5 360 9.04E-100 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 TIGRFAM TIGR02079 THD1: threonine dehydratase 5 416 3.4E-180 T 25-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 25-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 SUPERFAMILY SSF55021 333 411 1.74E-11 T 25-04-2016 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 PANTHER PTHR10314:SF30 1 362 1.8E-166 T 25-04-2016 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 415 2.5E-25 T 25-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 PANTHER PTHR10314 1 362 1.8E-166 T 25-04-2016 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 310 2.2E-78 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 Gene3D G3DSA:3.40.50.1100 50 137 2.2E-32 T 25-04-2016 APQ13_RS06710 a96491762f27132c68ee550b17ed0ee9 416 Gene3D G3DSA:3.40.50.1100 138 326 1.2E-49 T 25-04-2016 APQ13_RS02390 d5a4a656382083d5fd7e7fd8ddf8918e 123 SMART SM00345 15 74 5.7E-14 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02390 d5a4a656382083d5fd7e7fd8ddf8918e 123 SUPERFAMILY SSF46785 4 86 1.37E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02390 d5a4a656382083d5fd7e7fd8ddf8918e 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-14 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02390 d5a4a656382083d5fd7e7fd8ddf8918e 123 PANTHER PTHR38445:SF2 1 119 7.6E-17 T 25-04-2016 APQ13_RS02390 d5a4a656382083d5fd7e7fd8ddf8918e 123 PANTHER PTHR38445 1 119 7.6E-17 T 25-04-2016 APQ13_RS02390 d5a4a656382083d5fd7e7fd8ddf8918e 123 Gene3D G3DSA:1.10.10.10 2 75 1.5E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 Pfam PF01228 Glycine radical 641 741 5.4E-23 T 25-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 PANTHER PTHR30191:SF0 1 762 0.0 T 25-04-2016 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 PANTHER PTHR30191 1 762 0.0 T 25-04-2016 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 ProSitePatterns PS00850 Glycine radical domain signature. 732 740 - T 25-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 Gene3D G3DSA:3.20.70.20 9 761 1.0E-232 T 25-04-2016 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 PIRSF PIRSF000379 11 762 3.5E-302 T 25-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 SUPERFAMILY SSF51998 9 761 2.24E-206 T 25-04-2016 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 Pfam PF02901 Pyruvate formate lyase-like 28 612 7.1E-154 T 25-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APQ13_RS05925 3d3d9fcc13d82e8fef031e4d69616abf 775 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 14 762 0.0 T 25-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APQ13_RS07960 1c2d2e6db7c3004868c93ca6229a895f 312 PANTHER PTHR33545 22 311 1.7E-106 T 25-04-2016 APQ13_RS07960 1c2d2e6db7c3004868c93ca6229a895f 312 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 42 245 7.1E-58 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT APQ13_RS07960 1c2d2e6db7c3004868c93ca6229a895f 312 PIRSF PIRSF006483 19 312 1.2E-96 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT APQ13_RS07960 1c2d2e6db7c3004868c93ca6229a895f 312 PANTHER PTHR33545:SF5 22 311 1.7E-106 T 25-04-2016 APQ13_RS07960 1c2d2e6db7c3004868c93ca6229a895f 312 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 251 306 8.0E-15 T 25-04-2016 IPR019264 Domain of unknown function DUF2179 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 PRINTS PR00139 Asparaginase/glutaminase family signature 76 94 4.4E-17 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 PRINTS PR00139 Asparaginase/glutaminase family signature 249 267 4.4E-17 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 4.4E-17 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 PIRSF PIRSF001220 1 318 6.3E-92 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 25-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 Gene3D G3DSA:3.40.50.1170 1 199 6.3E-59 T 25-04-2016 IPR027474 L-asparaginase, N-terminal APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 Pfam PF00710 Asparaginase, N-terminal 3 187 9.3E-55 T 25-04-2016 IPR027474 L-asparaginase, N-terminal APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 SMART SM00870 3 314 5.0E-133 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 Gene3D G3DSA:3.40.50.40 203 318 5.5E-31 T 25-04-2016 IPR027473 L-asparaginase, C-terminal domain APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 SUPERFAMILY SSF53774 1 318 1.7E-96 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 77 87 - T 25-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 PIRSF PIRSF500176 1 319 2.5E-94 T 25-04-2016 APQ13_RS09250 278a14e3b83c728667cc3bf7868ec85a 319 PANTHER PTHR11707 1 318 1.1E-55 T 25-04-2016 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Pfam PF02938 GAD domain 313 398 3.5E-23 T 25-04-2016 IPR029351 GAD domain APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 SUPERFAMILY SSF50249 2 110 1.83E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PANTHER PTHR22594:SF5 365 566 2.1E-240 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PANTHER PTHR22594:SF5 1 300 2.1E-240 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 SUPERFAMILY SSF55261 292 414 1.21E-38 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PANTHER PTHR22594 365 566 2.1E-240 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PANTHER PTHR22594 1 300 2.1E-240 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 552 9.6E-104 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Gene3D G3DSA:2.40.50.140 1 109 1.1E-35 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 SUPERFAMILY SSF55681 115 295 1.34E-102 T 25-04-2016 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 SUPERFAMILY SSF55681 419 579 1.34E-102 T 25-04-2016 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 9.3E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 9.3E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 9.3E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 9.3E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 580 8.3E-234 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Pfam PF01336 OB-fold nucleic acid binding domain 20 103 9.6E-15 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Gene3D G3DSA:3.30.930.10 409 580 3.0E-109 T 25-04-2016 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Gene3D G3DSA:3.30.930.10 134 279 3.0E-109 T 25-04-2016 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Gene3D G3DSA:3.30.1360.30 280 408 2.7E-47 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APQ13_RS07955 806e153c3831c3fc9d1ae16b2c4a5fcb 589 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 558 35.092 T 25-04-2016 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 SUPERFAMILY SSF82114 171 303 2.62E-43 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 303 4.2E-72 T 25-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 PANTHER PTHR22749:SF3 1 300 2.4E-98 T 25-04-2016 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 Gene3D G3DSA:3.40.50.620 8 177 4.5E-46 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 Pfam PF06574 FAD synthetase 12 165 5.2E-44 T 25-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 Pfam PF01687 Riboflavin kinase 182 301 4.4E-31 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 SMART SM00904 181 305 4.8E-53 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 PANTHER PTHR22749 1 300 2.4E-98 T 25-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 PIRSF PIRSF004491 1 306 1.5E-91 T 25-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 SUPERFAMILY SSF52374 18 179 1.58E-24 T 25-04-2016 APQ13_RS02600 ea6f39e11257a04338bd2d9f196c9da1 306 Gene3D G3DSA:2.40.30.30 178 303 2.5E-39 T 25-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 PANTHER PTHR10357:SF132 8 294 1.2E-143 T 25-04-2016 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 PANTHER PTHR10357:SF132 342 473 1.2E-143 T 25-04-2016 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 474 2.1E-270 T 25-04-2016 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 SMART SM00642 6 396 1.3E-4 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 PANTHER PTHR10357 8 294 1.2E-143 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 PANTHER PTHR10357 342 473 1.2E-143 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 Gene3D G3DSA:3.20.20.80 173 425 1.5E-96 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 Gene3D G3DSA:3.20.20.80 5 87 1.5E-96 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 Pfam PF00128 Alpha amylase, catalytic domain 36 261 2.2E-11 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 Gene3D G3DSA:3.90.400.10 88 167 7.7E-33 T 25-04-2016 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 PIRSF PIRSF003059 1 481 1.3E-193 T 25-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 APQ13_RS03730 fd60745d328f664007328f20eacd022d 481 SUPERFAMILY SSF51445 5 425 5.72E-77 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS00840 42a498daa580b5e80e08e878be0a4725 170 Pfam PF06177 QueT transporter 9 162 1.3E-33 T 25-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 APQ13_RS00840 42a498daa580b5e80e08e878be0a4725 170 PANTHER PTHR40044:SF1 1 170 5.6E-36 T 25-04-2016 APQ13_RS00840 42a498daa580b5e80e08e878be0a4725 170 PANTHER PTHR40044 1 170 5.6E-36 T 25-04-2016 APQ13_RS00840 42a498daa580b5e80e08e878be0a4725 170 PIRSF PIRSF031501 1 170 1.9E-51 T 25-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Pfam PF01225 Mur ligase family, catalytic domain 26 72 3.4E-6 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Gene3D G3DSA:3.90.190.20 306 451 4.5E-38 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 SUPERFAMILY SSF53244 307 450 8.06E-33 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Gene3D G3DSA:3.40.1190.10 83 303 5.9E-62 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 450 5.5E-114 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Gene3D G3DSA:3.40.1390.10 1 81 1.2E-21 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 PANTHER PTHR23135:SF3 14 451 6.1E-143 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 SUPERFAMILY SSF63418 2 97 1.57E-22 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 308 388 2.4E-9 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Pfam PF08245 Mur ligase middle domain 106 285 4.1E-44 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 PANTHER PTHR23135 14 451 6.1E-143 T 25-04-2016 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 451 32.42 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS04985 681cb3bbc29656edbfc69c59b415ddbc 452 SUPERFAMILY SSF53623 102 303 1.7E-47 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 PANTHER PTHR11735:SF11 1 127 7.3E-45 T 25-04-2016 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 205 5.4E-53 T 25-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 SUPERFAMILY SSF53067 107 203 4.01E-7 T 25-04-2016 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 Pfam PF00814 Glycoprotease family 32 167 5.2E-31 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 SUPERFAMILY SSF53067 1 102 2.24E-27 T 25-04-2016 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 Gene3D G3DSA:3.30.420.40 1 127 1.1E-40 T 25-04-2016 APQ13_RS05995 90ea982eae37410c40d317da022eb7b5 228 PANTHER PTHR11735 1 127 7.3E-45 T 25-04-2016 APQ13_RS00540 1726bf11f2a3a1568e9d9adad216a340 198 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 198 25.454 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APQ13_RS00540 1726bf11f2a3a1568e9d9adad216a340 198 PANTHER PTHR10695 4 196 6.1E-63 T 25-04-2016 APQ13_RS00540 1726bf11f2a3a1568e9d9adad216a340 198 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 3.8E-55 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APQ13_RS00540 1726bf11f2a3a1568e9d9adad216a340 198 Pfam PF01121 Dephospho-CoA kinase 4 181 8.3E-50 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APQ13_RS00540 1726bf11f2a3a1568e9d9adad216a340 198 Gene3D G3DSA:3.40.50.300 1 197 2.2E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00540 1726bf11f2a3a1568e9d9adad216a340 198 SUPERFAMILY SSF52540 1 193 4.67E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 Gene3D G3DSA:3.40.50.720 1 179 4.4E-49 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 PANTHER PTHR10366 3 338 4.1E-140 T 25-04-2016 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 7.2E-7 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 7.2E-7 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 7.2E-7 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 SUPERFAMILY SSF51735 1 336 1.2E-93 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 PANTHER PTHR10366:SF39 3 338 4.1E-140 T 25-04-2016 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 2.9E-136 T 25-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 262 5.5E-52 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 Gene3D G3DSA:3.90.25.10 180 232 3.1E-49 T 25-04-2016 APQ13_RS08120 50844d3c9694f8975770f992f4386e12 338 Gene3D G3DSA:3.90.25.10 264 337 3.1E-49 T 25-04-2016 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 9.3E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 SUPERFAMILY SSF52172 1 123 4.7E-35 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 PANTHER PTHR26402 2 227 4.1E-65 T 25-04-2016 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 Gene3D G3DSA:1.10.10.10 127 228 1.5E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 PANTHER PTHR26402:SF578 2 227 4.1E-65 T 25-04-2016 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 SMART SM00448 2 111 1.3E-33 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 Gene3D G3DSA:3.40.50.2300 1 123 5.1E-35 T 25-04-2016 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 Pfam PF00072 Response regulator receiver domain 4 111 6.3E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 SUPERFAMILY SSF46894 126 226 3.97E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS03090 63af45e27b286769e35a4a9405a38218 230 SMART SM00862 150 226 9.0E-20 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 Gene3D G3DSA:2.40.380.10 4 170 4.7E-45 T 25-04-2016 IPR007295 Domain of unknown function DUF402 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 SUPERFAMILY SSF159234 3 170 2.22E-31 T 25-04-2016 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 Hamap MF_01568 UPF0374 protein . 1 175 48.791 T 25-04-2016 IPR016882 Uncharacterised protein family UPF0374 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 Pfam PF04167 Protein of unknown function (DUF402) 60 124 3.8E-16 T 25-04-2016 IPR007295 Domain of unknown function DUF402 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 PIRSF PIRSF028345 1 177 1.1E-75 T 25-04-2016 IPR016882 Uncharacterised protein family UPF0374 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 PANTHER PTHR39159:SF1 1 176 2.0E-70 T 25-04-2016 APQ13_RS09470 e5268fd40dfd94148759b89fff15c680 177 PANTHER PTHR39159 1 176 2.0E-70 T 25-04-2016 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 SMART SM00422 3 71 8.2E-26 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 PANTHER PTHR30204 1 121 5.6E-33 T 25-04-2016 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 Gene3D G3DSA:1.10.1660.10 57 115 2.6E-11 T 25-04-2016 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 Gene3D G3DSA:1.10.1660.10 2 56 7.7E-27 T 25-04-2016 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.3E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.3E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.3E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 PANTHER PTHR30204:SF24 1 121 5.6E-33 T 25-04-2016 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 Pfam PF13411 MerR HTH family regulatory protein 3 67 9.7E-23 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS07895 0cb3b7a82b3c9f21fdb1bbd6e6fa2db5 124 SUPERFAMILY SSF46955 3 117 1.47E-32 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 314 7.7E-129 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 307 1.6E-105 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PANTHER PTHR11735 3 328 8.2E-145 T 25-04-2016 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PANTHER PTHR11735:SF6 3 328 8.2E-145 T 25-04-2016 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 4.6E-48 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 4.6E-48 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 4.6E-48 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 4.6E-48 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 4.6E-48 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 4.6E-48 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 Gene3D G3DSA:3.30.420.40 5 161 8.0E-48 T 25-04-2016 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 332 59.656 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 SUPERFAMILY SSF53067 5 309 3.24E-39 T 25-04-2016 APQ13_RS05985 6141d5804d8104767f69455544c6cb2a 336 Pfam PF00814 Glycoprotease family 27 308 1.7E-101 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.8E-27 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.8E-27 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.8E-27 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 25-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 PANTHER PTHR33705:SF2 1 84 1.2E-35 T 25-04-2016 APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 25-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 Pfam PF00381 PTS HPr component phosphorylation site 3 81 1.1E-28 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 PANTHER PTHR33705 1 84 1.2E-35 T 25-04-2016 APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.4E-32 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 SUPERFAMILY SSF55594 1 83 9.03E-28 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS04665 0ce1dc896c9d25653234e4f552a7eecf 87 Gene3D G3DSA:3.30.1340.10 1 83 4.3E-33 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 TIGRFAM TIGR00131 gal_kin: galactokinase 4 385 1.4E-118 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 Pfam PF00288 GHMP kinases N terminal domain 114 181 2.3E-10 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PIRSF PIRSF000530 1 388 6.2E-121 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 SUPERFAMILY SSF55060 206 386 1.23E-55 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.6E-41 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.6E-41 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00959 Mevalonate kinase family signature 333 350 2.6E-41 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00959 Mevalonate kinase family signature 24 48 2.6E-41 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 25-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 Gene3D G3DSA:3.30.70.890 211 385 5.8E-57 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 Pfam PF10509 Galactokinase galactose-binding signature 9 57 1.2E-21 T 25-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PANTHER PTHR10457 1 389 6.6E-120 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00473 Galactokinase signature 112 130 7.5E-30 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00473 Galactokinase signature 91 102 7.5E-30 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00473 Galactokinase signature 269 283 7.5E-30 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PRINTS PR00473 Galactokinase signature 26 44 7.5E-30 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 Hamap MF_00246 Galactokinase [galK]. 24 386 50.025 T 25-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 Gene3D G3DSA:3.30.230.10 4 210 8.5E-74 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 PANTHER PTHR10457:SF6 1 389 6.6E-120 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 SUPERFAMILY SSF54211 4 203 9.11E-63 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 25-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APQ13_RS03710 e8e238ea004be7f07b6cfe19b9a84f76 390 Pfam PF08544 GHMP kinases C terminal 285 363 8.5E-14 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 Pfam PF01544 CorA-like Mg2+ transporter protein 22 310 1.6E-58 T 25-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 PANTHER PTHR21535:SF40 4 314 1.8E-85 T 25-04-2016 APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 Gene3D G3DSA:3.30.460.20 6 114 6.9E-6 T 25-04-2016 APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 Gene3D G3DSA:1.20.58.340 236 314 6.3E-18 T 25-04-2016 APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 PANTHER PTHR21535 4 314 1.8E-85 T 25-04-2016 APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 SUPERFAMILY SSF143865 18 246 3.79E-45 T 25-04-2016 APQ13_RS09150 04c33f93e58fcbfa0312f8bb21004854 314 SUPERFAMILY SSF144083 247 312 3.53E-12 T 25-04-2016 APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 SUPERFAMILY SSF46955 3 105 3.66E-27 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 Gene3D G3DSA:1.10.490.50 152 238 4.5E-25 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 SUPERFAMILY SSF89082 150 238 6.41E-24 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 Pfam PF13411 MerR HTH family regulatory protein 3 68 3.5E-14 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 Gene3D G3DSA:1.10.1660.10 57 105 4.6E-5 T 25-04-2016 APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 SMART SM00422 3 71 1.2E-18 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 Gene3D G3DSA:1.10.1660.10 3 56 1.3E-22 T 25-04-2016 APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 Pfam PF07739 TipAS antibiotic-recognition domain 125 236 6.6E-28 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 PANTHER PTHR30204 3 237 2.0E-40 T 25-04-2016 APQ13_RS09380 71e6007c10bfb7e7cb0969801c21d3a0 238 PANTHER PTHR30204:SF27 3 237 2.0E-40 T 25-04-2016 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 PANTHER PTHR10055 3 339 5.0E-177 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 Pfam PF00579 tRNA synthetases class I (W and Y) 3 290 2.1E-58 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 Gene3D G3DSA:3.40.50.620 3 217 1.2E-76 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 PANTHER PTHR10055:SF6 3 339 5.0E-177 T 25-04-2016 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 Gene3D G3DSA:1.10.240.10 218 327 7.6E-36 T 25-04-2016 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 337 1.6E-78 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 338 34.73 T 25-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 SUPERFAMILY SSF52374 5 337 1.42E-79 T 25-04-2016 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 1.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APQ13_RS07710 d32ddfbbb3742644b6c83347baa9f915 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 1.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 PANTHER PTHR30175:SF7 501 612 5.6E-189 T 25-04-2016 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 PANTHER PTHR30175:SF7 1 472 5.6E-189 T 25-04-2016 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 Gene3D G3DSA:3.30.1360.60 1 81 2.6E-24 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 517 640 2.4E-50 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 27 98 1.9E-16 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 Pfam PF02378 Phosphotransferase system, EIIC 111 418 6.1E-62 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 517 637 1.5E-46 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 18 35 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 579 591 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 Gene3D G3DSA:2.70.70.10 508 662 8.7E-61 T 25-04-2016 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 473 6.8E-194 T 25-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 SUPERFAMILY SSF55604 7 81 1.31E-18 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 PANTHER PTHR30175 501 612 5.6E-189 T 25-04-2016 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 PANTHER PTHR30175 1 472 5.6E-189 T 25-04-2016 APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 SUPERFAMILY SSF51261 510 661 2.62E-54 T 25-04-2016 IPR011055 Duplicated hybrid motif APQ13_RS09205 32f1cdfc3510f3e510c415b100241bab 664 Pfam PF00367 phosphotransferase system, EIIB 9 40 1.4E-12 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 Pfam PF01171 PP-loop family 22 190 1.3E-53 T 25-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 PANTHER PTHR11807:SF2 1 401 7.6E-72 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 Gene3D G3DSA:3.40.50.620 6 167 1.3E-14 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 194 1.9E-52 T 25-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 SMART SM00977 346 418 7.9E-11 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 SUPERFAMILY SSF52402 8 212 2.56E-50 T 25-04-2016 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 346 389 1.6E-14 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 289 22.565 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 PANTHER PTHR11807 1 401 7.6E-72 T 25-04-2016 APQ13_RS07610 e10f44793f51e0a975d5dcf73ede9a7f 423 SUPERFAMILY SSF56037 341 399 1.99E-9 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 Pfam PF12327 FtsZ family, C-terminal domain 223 316 1.4E-29 T 25-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 SUPERFAMILY SSF52490 14 209 1.83E-66 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 25-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 PANTHER PTHR30314:SF3 1 405 2.2E-184 T 25-04-2016 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 SMART SM00865 208 325 6.0E-48 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 331 7.6E-125 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 6.1E-40 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 Gene3D G3DSA:3.30.1330.20 216 321 9.5E-45 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 PRINTS PR00423 Cell division protein FtsZ signature 99 119 1.5E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 PRINTS PR00423 Cell division protein FtsZ signature 127 148 1.5E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 PRINTS PR00423 Cell division protein FtsZ signature 213 234 1.5E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 PRINTS PR00423 Cell division protein FtsZ signature 190 212 1.5E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 PANTHER PTHR30314 1 405 2.2E-184 T 25-04-2016 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 Gene3D G3DSA:3.40.50.1440 15 215 1.1E-90 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 SUPERFAMILY SSF55307 205 319 3.2E-41 T 25-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 SMART SM00864 14 206 2.0E-108 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APQ13_RS05210 1d83c0281cf79a139466b8017e693a0e 434 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 426 37.525 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 Pfam PF01238 Phosphomannose isomerase type I 5 312 3.3E-75 T 25-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 PANTHER PTHR18964:SF114 1 255 4.1E-102 T 25-04-2016 APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 SUPERFAMILY SSF51182 1 311 5.94E-105 T 25-04-2016 IPR011051 RmlC-like cupin domain APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 PANTHER PTHR18964 1 255 4.1E-102 T 25-04-2016 APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 Gene3D G3DSA:2.60.120.10 232 312 4.4E-29 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 Gene3D G3DSA:2.60.120.10 2 216 5.8E-79 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 PIRSF PIRSF036894 2 314 2.7E-131 T 25-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APQ13_RS09215 811ed4e83bd89524e301cddcb421bda2 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 105 312 9.7E-43 T 25-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 Gene3D G3DSA:1.10.10.10 1 80 3.0E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 SUPERFAMILY SSF46785 1 97 2.23E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 SUPERFAMILY SSF53850 91 297 1.25E-20 T 25-04-2016 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 Gene3D G3DSA:3.40.190.10 117 184 3.4E-5 T 25-04-2016 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 Pfam PF03466 LysR substrate binding domain 119 298 1.2E-9 T 25-04-2016 IPR005119 LysR, substrate-binding APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.3E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.3E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.3E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 PANTHER PTHR30346 1 298 2.9E-77 T 25-04-2016 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 Gene3D G3DSA:3.40.190.10 185 266 1.1E-7 T 25-04-2016 APQ13_RS02240 108ea9246dea8243279e6ac3401991a7 302 PANTHER PTHR30346:SF0 1 298 2.9E-77 T 25-04-2016 APQ13_RS08865 fd250ba69245dcf7af076d14eeb0dbff 277 PANTHER PTHR33514 6 270 8.7E-104 T 25-04-2016 APQ13_RS08865 fd250ba69245dcf7af076d14eeb0dbff 277 Pfam PF02361 Cobalt transport protein 18 235 1.8E-27 T 25-04-2016 IPR003339 ABC/ECF transporter, transmembrane component APQ13_RS08865 fd250ba69245dcf7af076d14eeb0dbff 277 PANTHER PTHR33514:SF1 6 270 8.7E-104 T 25-04-2016 APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 PANTHER PTHR24220:SF589 6 243 5.3E-93 T 25-04-2016 APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 PANTHER PTHR24220 6 243 5.3E-93 T 25-04-2016 APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 SMART SM00382 36 215 1.5E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 SUPERFAMILY SSF52540 5 240 3.64E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 Pfam PF00005 ABC transporter 27 164 1.2E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS04770 3968db8e5d7afe42e1d71c3de471c889 249 Gene3D G3DSA:3.40.50.300 5 211 1.0E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07480 7138800bfd49835e3a73d49c98600370 168 Pfam PF04093 rod shape-determining protein MreD 4 164 4.7E-15 T 25-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APQ13_RS07480 7138800bfd49835e3a73d49c98600370 168 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 13 160 8.8E-10 T 25-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APQ13_RS02080 f3cf3afd521cc62396d51a01cb6e51bc 166 Gene3D G3DSA:3.40.50.9200 36 113 4.4E-6 T 25-04-2016 IPR015032 MTH538 TIR-like domain APQ13_RS02080 f3cf3afd521cc62396d51a01cb6e51bc 166 SUPERFAMILY SSF52206 49 101 1.7E-6 T 25-04-2016 IPR015032 MTH538 TIR-like domain APQ13_RS02080 f3cf3afd521cc62396d51a01cb6e51bc 166 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 6 118 4.9E-17 T 25-04-2016 IPR015032 MTH538 TIR-like domain APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 Pfam PF12833 Helix-turn-helix domain 213 292 3.6E-21 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 PANTHER PTHR11019:SF65 20 298 3.5E-43 T 25-04-2016 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 SUPERFAMILY SSF46689 243 294 5.38E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 Pfam PF02311 AraC-like ligand binding domain 25 169 1.8E-27 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 3.0E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 3.0E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 SUPERFAMILY SSF46689 191 241 2.51E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 PANTHER PTHR11019 20 298 3.5E-43 T 25-04-2016 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 SUPERFAMILY SSF51215 38 172 1.7E-10 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 Gene3D G3DSA:1.10.10.60 189 243 2.4E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 Gene3D G3DSA:1.10.10.60 244 294 8.2E-20 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 SMART SM00342 207 290 7.8E-26 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APQ13_RS03315 322eaf698f927adbc741787d85f2d39d 298 Gene3D G3DSA:2.60.120.280 18 172 6.7E-9 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 4.5E-25 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 4.5E-25 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 4.5E-25 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 4.5E-25 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 4.5E-25 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 4.5E-25 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 25-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 SUPERFAMILY SSF53697 5 448 1.27E-133 T 25-04-2016 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 Gene3D G3DSA:3.40.50.10490 200 418 1.2E-92 T 25-04-2016 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 409 426 - T 25-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 Gene3D G3DSA:3.40.50.10490 69 199 2.2E-24 T 25-04-2016 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 Pfam PF00342 Phosphoglucose isomerase 77 426 1.6E-22 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 436 24.497 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS06355 85ee4aaef1232ae625861bed29a99f73 449 PANTHER PTHR11469 57 447 9.6E-148 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 PANTHER PTHR30237 1 310 1.8E-90 T 25-04-2016 APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 PANTHER PTHR30237:SF5 1 310 1.8E-90 T 25-04-2016 APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 Gene3D G3DSA:3.50.30.60 182 314 4.0E-28 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 Pfam PF02016 LD-carboxypeptidase 10 306 3.3E-61 T 25-04-2016 IPR003507 Peptidase family S66 APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 Gene3D G3DSA:3.40.50.10740 2 166 1.8E-40 T 25-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 SUPERFAMILY SSF141986 163 308 1.44E-31 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 PIRSF PIRSF028757 1 318 9.2E-63 T 25-04-2016 IPR003507 Peptidase family S66 APQ13_RS08350 10ec13643ce51256470fbcbe306f679c 318 SUPERFAMILY SSF52317 2 162 1.28E-40 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 1.2E-53 T 25-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PANTHER PTHR11922 1 187 1.0E-71 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 Pfam PF00117 Glutamine amidotransferase class-I 3 183 8.2E-49 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 SUPERFAMILY SSF52317 1 185 7.64E-51 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PANTHER PTHR11922:SF7 1 187 1.0E-71 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 4.5E-13 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 45 54 4.5E-13 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 4.5E-13 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00097 Anthranilate synthase component II signature 162 175 9.0E-32 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00097 Anthranilate synthase component II signature 97 105 9.0E-32 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 9.0E-32 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00097 Anthranilate synthase component II signature 45 54 9.0E-32 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00097 Anthranilate synthase component II signature 72 83 9.0E-32 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00097 Anthranilate synthase component II signature 118 130 9.0E-32 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 72 88 9.3E-8 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 42 56 9.3E-8 T 25-04-2016 APQ13_RS05295 22f2ebb5707e5c200627cdab68921279 187 Gene3D G3DSA:3.40.50.880 1 185 3.7E-61 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS02265 15786c94a448760a24f33c7ba21242d8 166 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 161 4.9E-36 T 25-04-2016 IPR005247 YbhB/YbcL APQ13_RS02265 15786c94a448760a24f33c7ba21242d8 166 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 160 1.1E-27 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APQ13_RS02265 15786c94a448760a24f33c7ba21242d8 166 Gene3D G3DSA:3.90.280.10 9 160 2.1E-46 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APQ13_RS02265 15786c94a448760a24f33c7ba21242d8 166 SUPERFAMILY SSF49777 8 160 1.83E-32 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APQ13_RS02265 15786c94a448760a24f33c7ba21242d8 166 PANTHER PTHR30289 12 163 8.7E-33 T 25-04-2016 APQ13_RS04880 682a0413c559fe313efa648f4b4105bf 194 SUPERFAMILY SSF56601 1 169 1.25E-21 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS04880 682a0413c559fe313efa648f4b4105bf 194 Pfam PF13354 Beta-lactamase enzyme family 3 155 2.4E-5 T 25-04-2016 APQ13_RS04880 682a0413c559fe313efa648f4b4105bf 194 Gene3D G3DSA:3.40.710.10 1 169 1.2E-29 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PANTHER PTHR11071 1 175 6.9E-79 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PANTHER PTHR11071 198 252 6.9E-79 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 Gene3D G3DSA:2.40.100.10 55 252 9.7E-64 T 25-04-2016 IPR029000 Cyclophilin-like domain APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 SUPERFAMILY SSF50891 66 251 4.53E-54 T 25-04-2016 IPR029000 Cyclophilin-like domain APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 2.8E-15 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 2.8E-15 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 2.8E-15 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 100 117 - T 25-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 66 247 2.3E-49 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PANTHER PTHR11071:SF282 1 175 6.9E-79 T 25-04-2016 APQ13_RS00455 098d3ecc2ffc2fed9201deef48ecd662 258 PANTHER PTHR11071:SF282 198 252 6.9E-79 T 25-04-2016 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 45 59 - T 25-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 SUPERFAMILY SSF110324 13 94 8.37E-32 T 25-04-2016 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 39 80 6.0E-18 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 Pfam PF01016 Ribosomal L27 protein 13 92 2.7E-34 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 PANTHER PTHR15893 6 96 6.6E-46 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 Gene3D G3DSA:2.40.50.100 31 95 1.7E-30 T 25-04-2016 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 12 92 9.5E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 12 95 26.662 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 PRINTS PR00063 Ribosomal protein L27 signature 40 64 2.9E-36 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 PRINTS PR00063 Ribosomal protein L27 signature 15 39 2.9E-36 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03890 3c78aaec644250c9f634fd96312aff81 97 PRINTS PR00063 Ribosomal protein L27 signature 65 89 2.9E-36 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02320 1d451dc4a4c84832768983e6144c4c7c 185 Gene3D G3DSA:3.30.460.10 53 164 1.4E-6 T 25-04-2016 APQ13_RS02320 1d451dc4a4c84832768983e6144c4c7c 185 SUPERFAMILY SSF81301 45 183 1.28E-16 T 25-04-2016 APQ13_RS02320 1d451dc4a4c84832768983e6144c4c7c 185 SMART SM00954 73 184 5.4E-4 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS02320 1d451dc4a4c84832768983e6144c4c7c 185 Pfam PF04607 Region found in RelA / SpoT proteins 74 182 5.2E-9 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 SUPERFAMILY SSF48168 22 168 2.75E-39 T 25-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Pfam PF08343 Ribonucleotide reductase N-terminal 11 91 1.4E-27 T 25-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Pfam PF02867 Ribonucleotide reductase, barrel domain 170 698 1.3E-138 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 SUPERFAMILY SSF51998 169 701 1.01E-171 T 25-04-2016 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Gene3D G3DSA:3.20.70.20 569 609 1.6E-56 T 25-04-2016 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Gene3D G3DSA:3.20.70.20 645 669 1.6E-56 T 25-04-2016 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Gene3D G3DSA:3.20.70.20 79 291 1.6E-56 T 25-04-2016 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Gene3D G3DSA:3.20.70.20 344 507 1.6E-56 T 25-04-2016 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 2.7E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 2.7E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 2.7E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 2.7E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 245 264 2.7E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 94 165 6.4E-10 T 25-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 11 719 0.0 T 25-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 96 701 1.5E-149 T 25-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APQ13_RS04695 ed271d5d62c6aa2364bc0ede28bc6a48 719 PANTHER PTHR11573 8 701 7.9E-220 T 25-04-2016 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 430 442 1.4E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 469 485 1.4E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 448 460 1.4E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 539 550 1.4E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 Gene3D G3DSA:3.40.390.10 273 387 2.0E-90 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 Gene3D G3DSA:3.40.390.10 429 631 2.0E-90 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 Pfam PF05649 Peptidase family M13 5 384 1.1E-63 T 25-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 Pfam PF01431 Peptidase family M13 438 628 4.8E-62 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 SUPERFAMILY SSF55486 4 631 4.69E-186 T 25-04-2016 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 PANTHER PTHR11733 6 631 9.4E-136 T 25-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 APQ13_RS08345 33c6d9fd8e98df3bfd6c6cc7ba64e031 631 PANTHER PTHR11733:SF65 6 631 9.4E-136 T 25-04-2016 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PANTHER PTHR21109 1 56 2.5E-22 T 25-04-2016 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.0E-21 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 25-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.381 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 Pfam PF01165 Ribosomal protein S21 5 56 3.8E-21 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 7.0E-9 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04040 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 SUPERFAMILY SSF53335 5 91 1.7E-16 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 SUPERFAMILY SSF53335 165 308 1.7E-16 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 454 476 2.7E-8 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 477 491 2.7E-8 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 275 287 2.7E-8 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 311 6.7E-8 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 SUPERFAMILY SSF53335 252 288 2.15E-20 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 SUPERFAMILY SSF53335 331 508 2.15E-20 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 SUPERFAMILY SSF53335 743 885 1.07E-13 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 Gene3D G3DSA:3.40.50.150 743 863 1.5E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 753 759 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 278 284 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 Pfam PF01555 DNA methylase 750 889 1.1E-5 T 25-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 Pfam PF01555 DNA methylase 335 507 1.8E-13 T 25-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 Gene3D G3DSA:3.40.50.150 5 63 2.7E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04245 892a940d00e8bbaca1a069945b570eaa 965 Gene3D G3DSA:3.40.50.150 256 417 2.7E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 SUPERFAMILY SSF55035 117 220 5.49E-34 T 25-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 Gene3D G3DSA:3.90.770.10 234 375 1.3E-90 T 25-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 Gene3D G3DSA:3.90.770.10 11 121 1.3E-90 T 25-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 SUPERFAMILY SSF56542 229 427 2.35E-103 T 25-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 SUPERFAMILY SSF56542 12 124 2.35E-103 T 25-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 13 386 1.9E-102 T 25-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 PANTHER PTHR10572:SF6 11 427 4.1E-144 T 25-04-2016 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 PANTHER PTHR10572 11 427 4.1E-144 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 Gene3D G3DSA:3.30.70.420 122 220 5.3E-38 T 25-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03485 9810326e6f5a75154e334c837a7c84b7 427 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 20 387 1.7E-113 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 PANTHER PTHR26402:SF151 4 204 4.4E-82 T 25-04-2016 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.0E-21 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 PANTHER PTHR26402 4 204 4.4E-82 T 25-04-2016 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 SUPERFAMILY SSF52172 3 128 5.69E-31 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.0E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.0E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.0E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 SMART SM00421 145 202 1.7E-26 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 SMART SM00448 4 117 3.3E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 Pfam PF00072 Response regulator receiver domain 6 118 2.3E-24 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 Gene3D G3DSA:3.40.50.2300 2 120 4.2E-32 T 25-04-2016 APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 Gene3D G3DSA:1.10.10.10 121 210 2.3E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05545 31d4fc470491675b8f28d729faae9457 213 SUPERFAMILY SSF46894 142 209 9.86E-24 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 Pfam PF00294 pfkB family carbohydrate kinase 22 280 3.0E-52 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.3E-110 T 25-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 SUPERFAMILY SSF53613 1 281 5.92E-68 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 PIRSF PIRSF000535 1 303 1.1E-85 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 PANTHER PTHR10584 1 279 7.7E-108 T 25-04-2016 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 PANTHER PTHR10584:SF170 1 279 7.7E-108 T 25-04-2016 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 Gene3D G3DSA:3.40.1190.20 36 302 4.6E-82 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 5.0E-109 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APQ13_RS03785 c9a134711772eb89dc9ada17c84f8418 303 Gene3D G3DSA:2.20.150.10 9 35 1.0E-4 T 25-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 Gene3D G3DSA:1.10.150.210 17 67 5.2E-27 T 25-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 PANTHER PTHR10000:SF7 1 215 1.6E-77 T 25-04-2016 APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 SUPERFAMILY SSF56784 2 212 2.57E-48 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 177 5.3E-31 T 25-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 210 8.2E-74 T 25-04-2016 APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 Gene3D G3DSA:3.40.50.1000 68 200 1.6E-43 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 174 3.4E-24 T 25-04-2016 APQ13_RS01990 ff23cc460301f3c116eb515385b11138 215 PANTHER PTHR10000 1 215 1.6E-77 T 25-04-2016 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 PANTHER PTHR15680 1 115 4.0E-53 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 PIRSF PIRSF002191 1 115 2.1E-50 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 SUPERFAMILY SSF50104 1 114 3.51E-47 T 25-04-2016 IPR008991 Translation protein SH3-like domain APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 2.4E-49 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 25-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.353 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01910 2475a7fe7583d468b5f43fd2cfbe97ac 115 Pfam PF01245 Ribosomal protein L19 4 112 7.7E-52 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS04450 07ec511f83030d2b02a0712306ba51eb 246 SUPERFAMILY SSF51695 2 238 3.92E-64 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APQ13_RS04450 07ec511f83030d2b02a0712306ba51eb 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 232 7.9E-38 T 25-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APQ13_RS04450 07ec511f83030d2b02a0712306ba51eb 246 Gene3D G3DSA:3.20.20.190 2 242 3.1E-66 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APQ13_RS04450 07ec511f83030d2b02a0712306ba51eb 246 PANTHER PTHR23344 1 241 5.2E-63 T 25-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APQ13_RS01845 00bd9fc5d904224522ea554dc679a1cc 251 Gene3D G3DSA:3.40.50.150 16 243 1.2E-40 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS01845 00bd9fc5d904224522ea554dc679a1cc 251 PANTHER PTHR10108:SF805 13 211 6.8E-43 T 25-04-2016 APQ13_RS01845 00bd9fc5d904224522ea554dc679a1cc 251 PANTHER PTHR10108 13 211 6.8E-43 T 25-04-2016 APQ13_RS01845 00bd9fc5d904224522ea554dc679a1cc 251 SUPERFAMILY SSF53335 14 241 4.76E-41 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS01845 00bd9fc5d904224522ea554dc679a1cc 251 Pfam PF13649 Methyltransferase domain 42 139 8.3E-19 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 426 6.4E-134 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 Pfam PF00344 SecY translocase 69 412 1.8E-98 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PANTHER PTHR10906 6 430 8.5E-169 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 2.0E-87 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 SUPERFAMILY SSF103491 5 421 2.75E-117 T 25-04-2016 IPR023201 SecY subunit domain APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 Gene3D G3DSA:1.10.3370.10 6 431 1.2E-132 T 25-04-2016 IPR023201 SecY subunit domain APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PANTHER PTHR10906:SF2 6 430 8.5E-169 T 25-04-2016 APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 25-04-2016 IPR030659 SecY conserved site APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 430 26.635 T 25-04-2016 IPR026593 Protein translocase subunit SecY APQ13_RS08500 94749a4ad4c6b03a6c744a22b7a4b0b9 434 PIRSF PIRSF004557 2 434 5.8E-117 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 PANTHER PTHR30002:SF4 1 362 7.5E-111 T 25-04-2016 APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 7 338 7.5E-111 T 25-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 Gene3D G3DSA:1.25.10.10 297 365 3.9E-4 T 25-04-2016 IPR011989 Armadillo-like helical APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 Pfam PF13484 4Fe-4S double cluster binding domain 186 248 6.2E-13 T 25-04-2016 APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 PANTHER PTHR30002 1 362 7.5E-111 T 25-04-2016 APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 SUPERFAMILY SSF46548 155 250 5.75E-12 T 25-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APQ13_RS01730 9430a1494f1d35cbf822abaab52519e8 374 Pfam PF08331 Domain of unknown function (DUF1730) 54 133 7.2E-16 T 25-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 APQ13_RS08125 6fdfc8f9e26b85bef31b3969ae3bc2f0 932 PANTHER PTHR38454 49 930 5.3E-43 T 25-04-2016 APQ13_RS08125 6fdfc8f9e26b85bef31b3969ae3bc2f0 932 PANTHER PTHR38454:SF1 49 930 5.3E-43 T 25-04-2016 APQ13_RS08125 6fdfc8f9e26b85bef31b3969ae3bc2f0 932 Pfam PF09586 Bacterial membrane protein YfhO 67 904 2.4E-229 T 25-04-2016 IPR018580 Uncharacterised protein family YfhO APQ13_RS03965 4639e8b5d7d9e60cb0e68a62d0835361 308 SUPERFAMILY SSF53448 1 256 8.75E-41 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS03965 4639e8b5d7d9e60cb0e68a62d0835361 308 PANTHER PTHR10859 1 307 6.7E-137 T 25-04-2016 APQ13_RS03965 4639e8b5d7d9e60cb0e68a62d0835361 308 Pfam PF00535 Glycosyl transferase family 2 5 137 3.3E-30 T 25-04-2016 IPR001173 Glycosyltransferase 2-like APQ13_RS03965 4639e8b5d7d9e60cb0e68a62d0835361 308 PANTHER PTHR10859:SF81 1 307 6.7E-137 T 25-04-2016 APQ13_RS03965 4639e8b5d7d9e60cb0e68a62d0835361 308 Gene3D G3DSA:3.90.550.10 1 142 3.4E-26 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 PANTHER PTHR21600 1 236 3.4E-60 T 25-04-2016 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 3.4E-40 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 SUPERFAMILY SSF55120 50 237 1.5E-40 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 Pfam PF01479 S4 domain 1 44 3.2E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 SMART SM00363 1 60 1.8E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 Pfam PF00849 RNA pseudouridylate synthase 62 195 4.5E-15 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 PANTHER PTHR21600:SF19 1 236 3.4E-60 T 25-04-2016 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 SUPERFAMILY SSF55174 1 56 3.92E-11 T 25-04-2016 APQ13_RS04840 3aa6e4c419d990356a4859edcf563ea5 238 Gene3D G3DSA:3.10.290.10 1 64 4.5E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 PANTHER PTHR23029 1 199 1.4E-66 T 25-04-2016 APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 SMART SM00855 4 154 1.6E-20 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 25-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 SUPERFAMILY SSF53254 1 197 1.7E-47 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 189 2.0E-42 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 PANTHER PTHR23029:SF38 1 199 1.4E-66 T 25-04-2016 APQ13_RS02785 4a8f5fe21416dc1924a54e939571d607 204 Gene3D G3DSA:3.40.50.1240 1 186 5.1E-47 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS09225 aa5e093525b4f9592ff519c58b0dd36e 344 Gene3D G3DSA:3.20.20.70 3 342 2.6E-103 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS09225 aa5e093525b4f9592ff519c58b0dd36e 344 PIRSF PIRSF001361 1 344 5.0E-118 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS09225 aa5e093525b4f9592ff519c58b0dd36e 344 SUPERFAMILY SSF51569 4 342 3.22E-94 T 25-04-2016 APQ13_RS09225 aa5e093525b4f9592ff519c58b0dd36e 344 Pfam PF00793 DAHP synthetase I family 37 333 5.2E-51 T 25-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APQ13_RS09225 aa5e093525b4f9592ff519c58b0dd36e 344 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 21 343 1.6E-76 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS09225 aa5e093525b4f9592ff519c58b0dd36e 344 PANTHER PTHR21225 10 343 6.1E-157 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS03415 4a28e80a07f980e56b8a10db463718a4 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 162 27.59 T 25-04-2016 IPR022973 Ribosomal protein L10 APQ13_RS03415 4a28e80a07f980e56b8a10db463718a4 167 PANTHER PTHR11560 1 162 4.1E-55 T 25-04-2016 APQ13_RS03415 4a28e80a07f980e56b8a10db463718a4 167 SUPERFAMILY SSF160369 7 161 1.96E-50 T 25-04-2016 APQ13_RS03415 4a28e80a07f980e56b8a10db463718a4 167 Pfam PF00466 Ribosomal protein L10 7 102 2.2E-26 T 25-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APQ13_RS03415 4a28e80a07f980e56b8a10db463718a4 167 ProSitePatterns PS01109 Ribosomal protein L10 signature. 9 43 - T 25-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 Gene3D G3DSA:3.40.190.10 128 229 1.0E-22 T 25-04-2016 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 Gene3D G3DSA:3.40.190.10 230 270 8.6E-42 T 25-04-2016 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 Gene3D G3DSA:3.40.190.10 39 127 8.6E-42 T 25-04-2016 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 SMART SM00062 41 269 1.8E-74 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 SUPERFAMILY SSF53850 4 269 3.53E-67 T 25-04-2016 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 PANTHER PTHR18966 38 270 2.8E-36 T 25-04-2016 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 PANTHER PTHR18966:SF152 38 270 2.8E-36 T 25-04-2016 APQ13_RS02460 aac446a3de06ae2294d8e2752345f3c5 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 268 1.2E-60 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 Pfam PF02378 Phosphotransferase system, EIIC 113 405 8.1E-28 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 Gene3D G3DSA:3.30.1360.60 4 83 1.4E-29 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 498 621 8.5E-51 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 PANTHER PTHR30175 4 593 3.6E-171 T 25-04-2016 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 Pfam PF00367 phosphotransferase system, EIIB 10 43 4.6E-15 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 SUPERFAMILY SSF55604 7 82 3.01E-23 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 5 642 3.5E-208 T 25-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 Gene3D G3DSA:2.70.70.10 490 642 6.0E-62 T 25-04-2016 APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 SUPERFAMILY SSF51261 491 641 7.15E-56 T 25-04-2016 IPR011055 Duplicated hybrid motif APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 560 572 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 498 618 9.0E-45 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03325 7009d556dedfc353db45a333fdd0b002 644 PANTHER PTHR30175:SF1 4 593 3.6E-171 T 25-04-2016 APQ13_RS06535 ae65b7b79a38df19235296ceecad5fd4 221 SMART SM00934 7 212 3.0E-28 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS06535 ae65b7b79a38df19235296ceecad5fd4 221 PANTHER PTHR35039 1 221 1.6E-105 T 25-04-2016 APQ13_RS06535 ae65b7b79a38df19235296ceecad5fd4 221 Gene3D G3DSA:3.20.20.70 5 220 4.5E-73 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS06535 ae65b7b79a38df19235296ceecad5fd4 221 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 211 5.7E-29 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS06535 ae65b7b79a38df19235296ceecad5fd4 221 PANTHER PTHR35039:SF2 1 221 1.6E-105 T 25-04-2016 APQ13_RS06535 ae65b7b79a38df19235296ceecad5fd4 221 SUPERFAMILY SSF51366 6 216 5.6E-36 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Pfam PF00140 Sigma-70 factor, region 1.2 99 131 1.1E-14 T 25-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 161 174 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 SUPERFAMILY SSF88946 98 207 1.7E-53 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Pfam PF04539 Sigma-70 region 3 216 292 1.7E-30 T 25-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 133 358 5.4E-38 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Pfam PF04545 Sigma-70, region 4 305 358 4.0E-19 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 SUPERFAMILY SSF88659 267 368 2.06E-28 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Gene3D G3DSA:1.10.10.10 299 370 9.8E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 SUPERFAMILY SSF88659 210 284 1.21E-21 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Gene3D G3DSA:1.10.10.10 210 261 7.5E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Pfam PF03979 Sigma-70 factor, region 1.1 15 88 1.1E-7 T 25-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PANTHER PTHR30603 15 370 5.0E-201 T 25-04-2016 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Gene3D G3DSA:1.10.601.10 25 206 5.7E-74 T 25-04-2016 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PRINTS PR00046 Major sigma-70 factor signature 161 174 2.2E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PRINTS PR00046 Major sigma-70 factor signature 330 345 2.2E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PRINTS PR00046 Major sigma-70 factor signature 309 321 2.2E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PRINTS PR00046 Major sigma-70 factor signature 185 193 2.2E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PRINTS PR00046 Major sigma-70 factor signature 345 356 2.2E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 330 356 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 PANTHER PTHR30603:SF0 15 370 5.0E-201 T 25-04-2016 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 370 33.134 T 25-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 Pfam PF04542 Sigma-70 region 2 137 206 5.3E-23 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS04020 6ad9c30621e7340522909cfadebfb6ed 371 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 133 369 3.7E-125 T 25-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 SUPERFAMILY SSF47413 3 51 1.34E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 Pfam PF13377 Periplasmic binding protein-like domain 165 331 5.5E-32 T 25-04-2016 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 Gene3D G3DSA:3.40.50.2300 169 311 6.4E-34 T 25-04-2016 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 Gene3D G3DSA:1.10.260.40 1 48 1.7E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 SUPERFAMILY SSF53822 74 315 5.89E-42 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 PANTHER PTHR30146 1 330 8.9E-122 T 25-04-2016 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 SMART SM00354 1 72 5.6E-11 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.0E-6 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.0E-6 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 PANTHER PTHR30146:SF28 1 330 8.9E-122 T 25-04-2016 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-17 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS03715 447e2441230b20810b3872e18b772b15 332 Gene3D G3DSA:3.40.50.2300 74 168 9.2E-10 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PIRSF PIRSF000350 1 449 1.1E-56 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 Gene3D G3DSA:3.30.390.30 345 448 9.2E-19 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 Gene3D G3DSA:3.50.50.60 140 258 1.2E-23 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 445 1.1E-14 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 Gene3D G3DSA:3.50.50.60 265 337 3.7E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 Gene3D G3DSA:3.50.50.60 9 139 3.7E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PANTHER PTHR22912:SF157 10 453 2.2E-90 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 SUPERFAMILY SSF51905 9 319 5.7E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 315 1.5E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PANTHER PTHR22912 10 453 2.2E-90 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 360 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 446 9.4E-31 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 3.6E-20 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 3.6E-20 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 3.6E-20 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 3.6E-20 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 3.6E-20 T 25-04-2016 APQ13_RS07030 544549803d73a0666dd017d778ea1197 453 SUPERFAMILY SSF55424 345 449 5.33E-21 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 SMART SM00836 450 563 4.5E-41 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 563 3.3E-160 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Gene3D G3DSA:1.10.730.10 444 563 5.3E-37 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 563 27.456 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 PANTHER PTHR11956 1 563 2.2E-236 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 PANTHER PTHR11956:SF1 1 563 2.2E-236 T 25-04-2016 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 SUPERFAMILY SSF52374 109 444 3.13E-100 T 25-04-2016 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 SUPERFAMILY SSF47323 444 563 1.33E-33 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Pfam PF05746 DALR anticodon binding domain 450 563 1.8E-32 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 SMART SM01016 5 83 2.1E-25 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 83 1.4E-16 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Pfam PF00750 tRNA synthetases class I (R) 96 435 1.3E-99 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Gene3D G3DSA:3.30.1360.70 5 100 1.7E-30 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 SUPERFAMILY SSF55190 1 103 4.58E-25 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APQ13_RS07970 e9881ce0276591dfc82ab6368743d6ac 563 Gene3D G3DSA:3.40.50.620 108 443 4.5E-114 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 195 5.8E-15 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 202 2.2E-26 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 PANTHER PTHR12725 2 267 4.8E-39 T 25-04-2016 APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 4.25E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 4.25E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 4.25E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 SUPERFAMILY SSF56784 1 228 7.46E-42 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 Gene3D G3DSA:3.40.50.1000 87 233 1.0E-36 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04225 1698cd5cb39ff481e18c15d31d3b0a42 300 PANTHER PTHR12725:SF78 2 267 4.8E-39 T 25-04-2016 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SUPERFAMILY SSF52540 594 608 2.22E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SUPERFAMILY SSF52540 418 487 2.22E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SUPERFAMILY SSF52540 636 800 2.22E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SUPERFAMILY SSF52540 278 334 2.22E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SUPERFAMILY SSF53098 30 216 1.9E-46 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 30 544 9.1E-177 T 25-04-2016 IPR006310 DnaQ exonuclease/DinG helicase, predicted APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 PANTHER PTHR30231 15 486 9.7E-148 T 25-04-2016 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SMART SM00491 672 808 2.2E-8 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SMART SM00479 30 194 2.9E-37 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Gene3D G3DSA:3.40.50.300 773 805 2.7E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Gene3D G3DSA:3.40.50.300 655 740 2.7E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Pfam PF00929 Exonuclease 33 185 1.4E-26 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Pfam PF13307 Helicase C-terminal domain 667 820 3.6E-24 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Pfam PF00270 DEAD/DEAH box helicase 285 364 4.1E-5 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Gene3D G3DSA:3.30.420.10 26 194 1.4E-47 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 SMART SM00487 264 528 0.0023 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 30 195 5.0E-30 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 PANTHER PTHR30231:SF8 15 486 9.7E-148 T 25-04-2016 APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Gene3D G3DSA:3.40.50.300 276 357 3.3E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Gene3D G3DSA:3.40.50.300 429 500 3.3E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01790 a94ed21a967b5c96de92657f3cc6dfcd 842 Gene3D G3DSA:3.40.50.300 596 607 3.3E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05935 0b236027982d5bb1119eb5ca5757ff7b 316 PANTHER PTHR22935 4 298 1.0E-41 T 25-04-2016 APQ13_RS05935 0b236027982d5bb1119eb5ca5757ff7b 316 SUPERFAMILY SSF56601 3 295 1.8E-58 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05935 0b236027982d5bb1119eb5ca5757ff7b 316 PANTHER PTHR22935:SF10 4 298 1.0E-41 T 25-04-2016 APQ13_RS05935 0b236027982d5bb1119eb5ca5757ff7b 316 Pfam PF00144 Beta-lactamase 12 295 4.2E-42 T 25-04-2016 IPR001466 Beta-lactamase-related APQ13_RS05935 0b236027982d5bb1119eb5ca5757ff7b 316 Gene3D G3DSA:3.40.710.10 4 291 2.0E-48 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 Gene3D G3DSA:3.40.50.2300 2 121 9.6E-39 T 25-04-2016 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 Pfam PF00072 Response regulator receiver domain 5 114 3.5E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 SUPERFAMILY SSF52172 2 131 4.27E-38 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 207 5.1E-12 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 PANTHER PTHR26402:SF316 3 204 6.6E-59 T 25-04-2016 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 Gene3D G3DSA:1.10.10.10 126 210 3.3E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 SUPERFAMILY SSF46894 123 213 2.27E-13 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 SMART SM00862 146 223 4.4E-7 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 SMART SM00448 3 114 2.4E-41 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS03555 d1d304728e99c994e608108ca70beb83 228 PANTHER PTHR26402 3 204 6.6E-59 T 25-04-2016 APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 PANTHER PTHR24220 5 233 1.1E-97 T 25-04-2016 APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 SMART SM00382 32 215 1.1E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 Pfam PF00005 ABC transporter 24 166 1.1E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 SUPERFAMILY SSF52540 4 220 2.6E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 Gene3D G3DSA:3.40.50.300 3 218 3.3E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 PANTHER PTHR24220:SF577 5 233 1.1E-97 T 25-04-2016 APQ13_RS02510 62d5757efee65f2c1fd437ed1ae2127a 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 PANTHER PTHR11203:SF38 1 554 3.3E-270 T 25-04-2016 APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 SMART SM00849 16 212 7.7E-18 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 Pfam PF00753 Metallo-beta-lactamase superfamily 17 163 2.6E-13 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 PANTHER PTHR11203 1 554 3.3E-270 T 25-04-2016 APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 Gene3D G3DSA:3.60.15.10 2 253 3.6E-64 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 353 403 1.2E-10 T 25-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 Hamap MF_01491 Ribonuclease J [rnj]. 1 553 38.69 T 25-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 SUPERFAMILY SSF56281 4 418 1.16E-68 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01270 e0aa45b838f7d3d9ca5b308bc9305880 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 4 551 1.3E-147 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 PANTHER PTHR18964:SF2 2 378 4.9E-191 T 25-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 368 7.8E-156 T 25-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 Gene3D G3DSA:3.40.50.2000 1 206 6.0E-87 T 25-04-2016 APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 Gene3D G3DSA:3.40.50.2000 207 367 9.6E-63 T 25-04-2016 APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 PANTHER PTHR18964 2 378 4.9E-191 T 25-04-2016 APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 365 9.5E-123 T 25-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APQ13_RS01295 f777dc49c7c354486c45185c4997ccc0 382 SUPERFAMILY SSF53756 3 371 1.53E-133 T 25-04-2016 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 Pfam PF02926 THUMP domain 20 159 3.0E-6 T 25-04-2016 IPR004114 THUMP domain GO:0003723 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 SMART SM00981 58 159 1.3E-8 T 25-04-2016 IPR004114 THUMP domain GO:0003723 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 PANTHER PTHR18895 258 381 7.3E-90 T 25-04-2016 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 PANTHER PTHR18895 42 223 7.3E-90 T 25-04-2016 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 SUPERFAMILY SSF53335 259 370 1.36E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 SUPERFAMILY SSF53335 148 222 1.36E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 PANTHER PTHR18895:SF62 258 381 7.3E-90 T 25-04-2016 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 PANTHER PTHR18895:SF62 42 223 7.3E-90 T 25-04-2016 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 Pfam PF01170 Putative RNA methylase family UPF0020 167 371 2.3E-53 T 25-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 Gene3D G3DSA:3.40.50.150 150 219 1.3E-22 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05610 9174b7dc851c13f1784dcb3c7c411d9b 384 Gene3D G3DSA:3.40.50.150 256 378 1.3E-22 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 124 271 1.6E-41 T 25-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 PANTHER PTHR10996:SF20 10 347 1.9E-101 T 25-04-2016 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 SUPERFAMILY SSF51735 87 274 2.23E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 50 305 3.6E-17 T 25-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 139 166 - T 25-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 SUPERFAMILY SSF55021 308 389 5.0E-12 T 25-04-2016 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 Gene3D G3DSA:3.40.50.720 33 98 6.2E-19 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 Gene3D G3DSA:3.30.70.260 302 389 4.8E-19 T 25-04-2016 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 Gene3D G3DSA:3.40.50.720 99 276 6.4E-46 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 PANTHER PTHR10996 10 347 1.9E-101 T 25-04-2016 APQ13_RS00355 5d6c24e97c0330ac8e3673ce28df87a8 393 SUPERFAMILY SSF52283 28 109 1.78E-19 T 25-04-2016 APQ13_RS08665 08cc1415e98cd974fa6b233c37794bf9 81 Pfam PF01381 Helix-turn-helix 5 58 1.4E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08665 08cc1415e98cd974fa6b233c37794bf9 81 SUPERFAMILY SSF47413 3 66 7.24E-18 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08665 08cc1415e98cd974fa6b233c37794bf9 81 Gene3D G3DSA:1.10.260.40 1 64 1.2E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08665 08cc1415e98cd974fa6b233c37794bf9 81 SMART SM00530 4 59 1.1E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08665 08cc1415e98cd974fa6b233c37794bf9 81 PANTHER PTHR10245 1 67 7.6E-24 T 25-04-2016 APQ13_RS08665 08cc1415e98cd974fa6b233c37794bf9 81 PANTHER PTHR10245:SF26 1 67 7.6E-24 T 25-04-2016 APQ13_RS02555 7df316c07b6708198407dfa7b400fcb0 303 Gene3D G3DSA:3.20.20.80 134 283 2.8E-4 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS02555 7df316c07b6708198407dfa7b400fcb0 303 SUPERFAMILY SSF51445 55 281 4.94E-16 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Gene3D G3DSA:3.40.1110.10 323 559 2.2E-63 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF81660 340 556 5.67E-58 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF81653 121 231 9.15E-31 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 628 735 8.6E-33 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 91 354 1.9E-42 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Gene3D G3DSA:2.70.150.10 27 63 6.9E-43 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Gene3D G3DSA:2.70.150.10 117 231 6.9E-43 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 252 274 3.6E-21 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 71 85 3.6E-21 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 798 818 3.6E-21 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 729 750 3.6E-21 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 471 489 3.6E-21 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 326 347 3.6E-21 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Pfam PF00122 E1-E2 ATPase 90 324 2.2E-69 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Gene3D G3DSA:1.20.1110.10 624 928 4.7E-97 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Gene3D G3DSA:1.20.1110.10 64 116 4.7E-97 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Pfam PF00689 Cation transporting ATPase, C-terminus 741 924 9.2E-48 T 25-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF81665 233 327 1.01E-113 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF81665 18 122 1.01E-113 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF81665 705 929 1.01E-113 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 335 341 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF56784 501 762 2.88E-63 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SUPERFAMILY SSF56784 331 351 2.88E-63 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 SMART SM00831 11 84 9.0E-17 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PANTHER PTHR24093 816 929 0.0 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PANTHER PTHR24093 8 793 0.0 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 691 9.2E-42 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 674 9.2E-42 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 9.2E-42 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 563 9.2E-42 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 9.2E-42 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 574 584 9.2E-42 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PANTHER PTHR24093:SF268 816 929 0.0 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 PANTHER PTHR24093:SF268 8 793 0.0 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Pfam PF00702 haloacid dehalogenase-like hydrolase 331 669 9.0E-20 T 25-04-2016 APQ13_RS00760 8a579870bb89ac6f0ebdef47c6576aa2 930 Pfam PF00690 Cation transporter/ATPase, N-terminus 18 79 1.8E-16 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 433 1.4E-53 T 25-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 SUPERFAMILY SSF53335 143 435 1.77E-58 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 Gene3D G3DSA:1.10.940.10 5 156 8.7E-43 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 25-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 3.8E-28 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 3.8E-28 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 3.8E-28 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 418 435 3.8E-28 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 3.8E-28 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PANTHER PTHR22807 18 437 5.7E-109 T 25-04-2016 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 Gene3D G3DSA:3.40.50.150 232 435 2.0E-56 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 SUPERFAMILY SSF48013 8 155 4.06E-33 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 11 434 3.1E-108 T 25-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 PANTHER PTHR22807:SF30 18 437 5.7E-109 T 25-04-2016 APQ13_RS05570 a28dd4885497de0f869fc78ef8e5e667 437 Pfam PF01029 NusB family 7 129 1.2E-27 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 SUPERFAMILY SSF69065 7 163 7.15E-49 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 SMART SM00358 161 228 8.5E-22 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 227 8.1E-81 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 ProSitePatterns PS00517 Ribonuclease III family signature. 44 52 - T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 Gene3D G3DSA:1.10.1520.10 7 151 7.6E-46 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 SMART SM00535 20 155 6.1E-56 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 PANTHER PTHR11207 1 228 1.3E-81 T 25-04-2016 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 Pfam PF00035 Double-stranded RNA binding motif 161 227 1.9E-15 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 Pfam PF14622 Ribonuclease-III-like 18 147 1.6E-35 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 SUPERFAMILY SSF54768 115 227 5.03E-23 T 25-04-2016 APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 Gene3D G3DSA:3.30.160.20 160 227 6.4E-28 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain APQ13_RS00985 4ceb765cfa025b7128dfe65c8ee09bd1 231 Hamap MF_00104 Ribonuclease 3 [rnc]. 4 224 30.553 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APQ13_RS02850 a6f3e6c8eb117c07014f04a8b4db75a5 200 Gene3D G3DSA:3.40.50.360 1 181 2.8E-45 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS02850 a6f3e6c8eb117c07014f04a8b4db75a5 200 PANTHER PTHR30543 1 193 3.0E-69 T 25-04-2016 APQ13_RS02850 a6f3e6c8eb117c07014f04a8b4db75a5 200 Pfam PF03358 NADPH-dependent FMN reductase 1 145 1.3E-33 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APQ13_RS02850 a6f3e6c8eb117c07014f04a8b4db75a5 200 PANTHER PTHR30543:SF6 1 193 3.0E-69 T 25-04-2016 APQ13_RS02850 a6f3e6c8eb117c07014f04a8b4db75a5 200 SUPERFAMILY SSF52218 1 171 2.29E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS07105 963206402039d956ecead8e147d10260 142 PANTHER PTHR33164:SF4 11 138 3.7E-29 T 25-04-2016 APQ13_RS07105 963206402039d956ecead8e147d10260 142 PANTHER PTHR33164 11 138 3.7E-29 T 25-04-2016 APQ13_RS07105 963206402039d956ecead8e147d10260 142 Gene3D G3DSA:1.10.10.10 12 140 1.7E-37 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07105 963206402039d956ecead8e147d10260 142 SMART SM00347 29 129 6.3E-20 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS07105 963206402039d956ecead8e147d10260 142 SUPERFAMILY SSF46785 12 140 1.18E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07105 963206402039d956ecead8e147d10260 142 Pfam PF01047 MarR family 36 93 4.4E-16 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS07105 963206402039d956ecead8e147d10260 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 4.5E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS07105 963206402039d956ecead8e147d10260 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 4.5E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS07105 963206402039d956ecead8e147d10260 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 4.5E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS00310 5732e0b6ef6455decf710161a0f6cee2 291 Pfam PF13177 DNA polymerase III, delta subunit 7 162 3.1E-53 T 25-04-2016 APQ13_RS00310 5732e0b6ef6455decf710161a0f6cee2 291 SUPERFAMILY SSF52540 7 187 1.78E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00310 5732e0b6ef6455decf710161a0f6cee2 291 Gene3D G3DSA:3.40.50.300 7 161 1.0E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00310 5732e0b6ef6455decf710161a0f6cee2 291 PANTHER PTHR11669 7 185 1.0E-44 T 25-04-2016 APQ13_RS00310 5732e0b6ef6455decf710161a0f6cee2 291 PANTHER PTHR11669:SF8 7 185 1.0E-44 T 25-04-2016 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 Pfam PF02378 Phosphotransferase system, EIIC 19 280 3.0E-16 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 SUPERFAMILY SSF52794 382 470 1.03E-20 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 PANTHER PTHR30181:SF2 2 589 1.5E-293 T 25-04-2016 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 384 468 3.8E-9 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 SUPERFAMILY SSF52794 500 588 9.94E-12 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 PANTHER PTHR30181 2 589 1.5E-293 T 25-04-2016 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 347 5.3E-146 T 25-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 Gene3D G3DSA:3.40.50.10370 496 589 2.1E-20 T 25-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 APQ13_RS02425 490ba835088b9a83829abaec076fe9bf 589 Gene3D G3DSA:3.40.50.10370 381 474 1.3E-38 T 25-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 APQ13_RS06425 e9c1c700a99c39cbd4dede6c1b625e89 318 SUPERFAMILY SSF51735 1 105 3.0E-9 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06425 e9c1c700a99c39cbd4dede6c1b625e89 318 Gene3D G3DSA:3.40.50.720 1 191 9.8E-13 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06425 e9c1c700a99c39cbd4dede6c1b625e89 318 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 92 7.1E-8 T 25-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APQ13_RS03855 baf104d95d8787524042a61610638f96 176 SUPERFAMILY SSF53271 4 166 7.87E-40 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS03855 baf104d95d8787524042a61610638f96 176 PANTHER PTHR11608 1 173 1.7E-84 T 25-04-2016 APQ13_RS03855 baf104d95d8787524042a61610638f96 176 Pfam PF00156 Phosphoribosyl transferase domain 4 150 8.4E-23 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APQ13_RS03855 baf104d95d8787524042a61610638f96 176 Gene3D G3DSA:3.40.50.2020 3 165 2.0E-47 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS03855 baf104d95d8787524042a61610638f96 176 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 171 35.457 T 25-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PRINTS PR01607 Apyrase family signature 109 127 2.9E-18 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PRINTS PR01607 Apyrase family signature 468 491 2.9E-18 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PRINTS PR01607 Apyrase family signature 565 584 2.9E-18 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PRINTS PR01607 Apyrase family signature 320 343 2.9E-18 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 Gene3D G3DSA:3.60.21.10 108 401 2.4E-68 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 Gene3D G3DSA:3.90.780.10 408 611 1.2E-44 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PANTHER PTHR11575 112 304 2.5E-89 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PANTHER PTHR11575 322 612 2.5E-89 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 Pfam PF00149 Calcineurin-like phosphoesterase 112 337 7.1E-6 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 ProSitePatterns PS00786 5'-nucleotidase signature 2. 182 193 - T 25-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 Pfam PF02872 5'-nucleotidase, C-terminal domain 408 590 1.8E-33 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 SUPERFAMILY SSF56300 111 400 1.16E-57 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 SUPERFAMILY SSF55816 408 616 1.7E-41 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APQ13_RS02300 72e626f24a2a1f3535e87ab20526b861 741 PIRSF PIRSF033095 1 703 0.0 T 25-04-2016 IPR014579 Predicted 5'-nucleotidase, SA0022 type APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 Pfam PF01263 Aldose 1-epimerase 2 264 1.7E-28 T 25-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 SUPERFAMILY SSF74650 2 297 3.83E-46 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 Gene3D G3DSA:2.70.98.10 2 266 5.9E-15 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 PANTHER PTHR11122:SF14 2 58 2.7E-34 T 25-04-2016 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 PANTHER PTHR11122:SF14 74 169 2.7E-34 T 25-04-2016 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 PANTHER PTHR11122:SF14 201 287 2.7E-34 T 25-04-2016 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 PANTHER PTHR11122 2 58 2.7E-34 T 25-04-2016 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 PANTHER PTHR11122 74 169 2.7E-34 T 25-04-2016 APQ13_RS01070 5e088946ce7f48c9cf54a3f240aa85f8 298 PANTHER PTHR11122 201 287 2.7E-34 T 25-04-2016 APQ13_RS05700 4fbbaad8b49b9c8ad73547c7e5be3cd1 107 Hamap MF_00910 Cell division protein FtsL [ftsL]. 23 107 14.386 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APQ13_RS05700 4fbbaad8b49b9c8ad73547c7e5be3cd1 107 PANTHER PTHR41300:SF1 6 107 6.2E-18 T 25-04-2016 APQ13_RS05700 4fbbaad8b49b9c8ad73547c7e5be3cd1 107 PANTHER PTHR41300 6 107 6.2E-18 T 25-04-2016 APQ13_RS05700 4fbbaad8b49b9c8ad73547c7e5be3cd1 107 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 25 106 1.6E-18 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 SUPERFAMILY SSF52172 2 132 9.39E-35 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 1.4E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 Gene3D G3DSA:3.40.50.2300 2 158 2.7E-39 T 25-04-2016 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 SMART SM00448 2 115 3.2E-31 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 SMART SM00421 154 211 3.9E-17 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 PANTHER PTHR26402:SF151 2 215 5.0E-74 T 25-04-2016 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 Gene3D G3DSA:1.10.10.10 159 216 3.8E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 SUPERFAMILY SSF46894 141 216 5.1E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 PANTHER PTHR26402 2 215 5.0E-74 T 25-04-2016 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.2E-9 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.2E-9 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS08730 4e92ff730542c189f8420407fc8d3190 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.2E-9 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APQ13_RS08655 5a78de8047b3c20242d1400780b83a44 317 PIRSF PIRSF026567 1 317 6.8E-104 T 25-04-2016 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted APQ13_RS08655 5a78de8047b3c20242d1400780b83a44 317 SUPERFAMILY SSF53335 5 311 4.22E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS08655 5a78de8047b3c20242d1400780b83a44 317 Gene3D G3DSA:3.40.50.150 89 312 3.3E-20 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS08655 5a78de8047b3c20242d1400780b83a44 317 PANTHER PTHR41313 2 317 1.1E-97 T 25-04-2016 APQ13_RS08655 5a78de8047b3c20242d1400780b83a44 317 Pfam PF02384 N-6 DNA Methylase 78 283 2.6E-7 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 SUPERFAMILY SSF51604 139 430 5.99E-128 T 25-04-2016 IPR029065 Enolase C-terminal domain-like APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 Hamap MF_00318 Enolase [eno]. 2 415 44.688 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 ProSitePatterns PS00164 Enolase signature. 338 351 - T 25-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 Gene3D G3DSA:3.20.20.120 128 428 2.1E-134 T 25-04-2016 IPR029065 Enolase C-terminal domain-like APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PIRSF PIRSF001400 1 429 9.2E-189 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PRINTS PR00148 Enolase signature 338 352 1.0E-44 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PRINTS PR00148 Enolase signature 107 123 1.0E-44 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PRINTS PR00148 Enolase signature 367 384 1.0E-44 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PRINTS PR00148 Enolase signature 315 326 1.0E-44 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PRINTS PR00148 Enolase signature 161 174 1.0E-44 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PRINTS PR00148 Enolase signature 37 51 1.0E-44 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 SUPERFAMILY SSF54826 3 138 1.21E-58 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 Gene3D G3DSA:3.30.390.10 4 124 1.6E-57 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 427 1.1E-127 T 25-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 SMART SM01193 4 134 2.9E-96 T 25-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 SMART SM01192 139 429 3.8E-214 T 25-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 9.4E-208 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 Pfam PF03952 Enolase, N-terminal domain 4 134 3.6E-61 T 25-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APQ13_RS02135 159d5cbcea2d4e2d05c800eec47d4563 432 PANTHER PTHR11902 1 429 4.4E-263 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 Gene3D G3DSA:3.40.1030.10 70 323 3.8E-109 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 SUPERFAMILY SSF54680 325 420 2.09E-24 T 25-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 SMART SM00941 338 411 9.2E-23 T 25-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 Gene3D G3DSA:1.20.970.10 1 67 2.3E-33 T 25-04-2016 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 PIRSF PIRSF000478 1 425 6.2E-159 T 25-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 Pfam PF00591 Glycosyl transferase family, a/b domain 78 301 4.9E-37 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 PANTHER PTHR10515 1 425 1.8E-194 T 25-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 SUPERFAMILY SSF47648 1 69 7.85E-24 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 338 410 2.7E-22 T 25-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 Gene3D G3DSA:3.90.1170.30 324 415 9.6E-28 T 25-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 PANTHER PTHR10515:SF0 1 425 1.8E-194 T 25-04-2016 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 4.6E-23 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 SUPERFAMILY SSF52418 69 319 1.44E-85 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 410 1.8E-175 T 25-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APQ13_RS02690 88efbac674996cecc22380acb0a376c3 425 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 25-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 3.3E-97 T 25-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 25-04-2016 IPR014762 DNA mismatch repair, conserved site APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 SUPERFAMILY SSF55874 3 214 3.27E-53 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 SUPERFAMILY SSF118116 448 637 2.62E-52 T 25-04-2016 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 Gene3D G3DSA:3.30.565.10 3 202 8.1E-71 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 PANTHER PTHR10073 4 651 1.1E-161 T 25-04-2016 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 4.2E-35 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 635 27.34 T 25-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 Gene3D G3DSA:3.30.230.10 203 326 6.6E-36 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 125 1.5E-12 T 25-04-2016 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 SMART SM01340 209 327 8.8E-50 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 Pfam PF08676 MutL C terminal dimerisation domain 452 595 4.3E-41 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 SUPERFAMILY SSF54211 191 327 2.35E-34 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS08010 2f2507bf3e1e43e48498b678a8652110 651 SMART SM00853 453 595 4.7E-45 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 Gene3D G3DSA:3.40.50.800 326 415 6.6E-24 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 SUPERFAMILY SSF52954 328 415 1.11E-20 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 PANTHER PTHR11476 1 425 5.8E-208 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 PIRSF PIRSF001549 1 419 4.7E-120 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 PANTHER PTHR11476:SF9 1 425 5.8E-208 T 25-04-2016 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 Gene3D G3DSA:3.30.930.10 1 185 5.5E-97 T 25-04-2016 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 Gene3D G3DSA:3.30.930.10 221 320 5.5E-97 T 25-04-2016 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 423 33.283 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 409 4.4E-153 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 Pfam PF03129 Anticodon binding domain 330 415 4.2E-12 T 25-04-2016 IPR004154 Anticodon-binding APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 Pfam PF13393 Histidyl-tRNA synthetase 8 312 5.7E-42 T 25-04-2016 APQ13_RS07950 66e454e838f22da8ac2455eefe1d009a 429 SUPERFAMILY SSF55681 4 318 1.34E-100 T 25-04-2016 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 SUPERFAMILY SSF53335 59 246 2.66E-20 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 SMART SM00363 4 71 5.6E-5 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 PANTHER PTHR32319 1 266 5.7E-124 T 25-04-2016 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 Pfam PF01479 S4 domain 4 49 2.5E-5 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 PIRSF PIRSF005578 1 267 8.6E-98 T 25-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 Gene3D G3DSA:3.40.50.150 92 226 8.8E-6 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 SUPERFAMILY SSF55174 3 71 1.47E-8 T 25-04-2016 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 Gene3D G3DSA:3.10.290.10 4 91 4.5E-19 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 PANTHER PTHR32319:SF0 1 266 5.7E-124 T 25-04-2016 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 239 1.3E-79 T 25-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 APQ13_RS05075 868930e91abc9fb3f285a5488bfffe15 275 Pfam PF01728 FtsJ-like methyltransferase 62 242 2.2E-17 T 25-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APQ13_RS08895 62e25ed5fc4e41fb138d798d32afe021 191 Pfam PF14278 Transcriptional regulator C-terminal region 86 158 6.0E-13 T 25-04-2016 APQ13_RS08895 62e25ed5fc4e41fb138d798d32afe021 191 PANTHER PTHR30055 1 175 4.2E-16 T 25-04-2016 APQ13_RS08895 62e25ed5fc4e41fb138d798d32afe021 191 PANTHER PTHR30055:SF55 1 175 4.2E-16 T 25-04-2016 APQ13_RS08895 62e25ed5fc4e41fb138d798d32afe021 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 51 2.9E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS08895 62e25ed5fc4e41fb138d798d32afe021 191 SUPERFAMILY SSF46689 6 68 6.16E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS08895 62e25ed5fc4e41fb138d798d32afe021 191 Gene3D G3DSA:1.10.357.10 7 175 4.9E-13 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 Gene3D G3DSA:3.30.450.20 223 371 1.8E-34 T 25-04-2016 APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 Gene3D G3DSA:3.40.50.360 1 180 5.1E-45 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 Pfam PF13596 PAS domain 242 355 1.7E-27 T 25-04-2016 APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 Pfam PF03358 NADPH-dependent FMN reductase 1 147 1.1E-33 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 PANTHER PTHR30543 1 194 9.3E-84 T 25-04-2016 APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 PANTHER PTHR30543:SF6 1 194 9.3E-84 T 25-04-2016 APQ13_RS02845 099c45b72fb99254eec62833af55a592 418 SUPERFAMILY SSF52218 1 173 2.97E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS01275 92695da4216ce907b84d22f96d1bed32 104 PIRSF PIRSF017292 1 104 3.5E-38 T 25-04-2016 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type APQ13_RS01275 92695da4216ce907b84d22f96d1bed32 104 Pfam PF05495 CHY zinc finger 17 88 5.6E-8 T 25-04-2016 IPR008913 Zinc finger, CHY-type GO:0008270 APQ13_RS01275 92695da4216ce907b84d22f96d1bed32 104 PANTHER PTHR28082:SF1 17 104 2.1E-23 T 25-04-2016 APQ13_RS01275 92695da4216ce907b84d22f96d1bed32 104 PANTHER PTHR28082 17 104 2.1E-23 T 25-04-2016 APQ13_RS01275 92695da4216ce907b84d22f96d1bed32 104 SUPERFAMILY SSF161219 5 90 3.4E-15 T 25-04-2016 APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 274 450 3.6E-22 T 25-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 SUPERFAMILY SSF50249 2 57 8.0E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 PANTHER PTHR11061 2 450 8.3E-152 T 25-04-2016 APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 PANTHER PTHR11061:SF30 2 450 8.3E-152 T 25-04-2016 APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 SUPERFAMILY SSF53335 77 450 3.41E-76 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 443 2.6E-129 T 25-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 433 443 - T 25-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 Gene3D G3DSA:2.40.50.140 1 69 2.0E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 Gene3D G3DSA:3.40.50.150 244 449 3.8E-65 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 Pfam PF01938 TRAM domain 6 57 8.9E-8 T 25-04-2016 IPR002792 TRAM domain APQ13_RS04160 237c30b4f23bab79e0aa877c64719fe4 451 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 25-04-2016 IPR030390 RNA methyltransferase TrmA, active site APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 PANTHER PTHR11562:SF18 17 297 9.8E-69 T 25-04-2016 APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 PANTHER PTHR11562 17 297 9.8E-69 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 Gene3D G3DSA:1.20.1510.10 16 207 4.7E-42 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 SUPERFAMILY SSF161111 8 209 3.92E-47 T 25-04-2016 APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 288 5.9E-18 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 Gene3D G3DSA:3.30.70.1350 209 288 3.5E-25 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 288 2.6E-59 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 Pfam PF01545 Cation efflux family 17 207 5.2E-46 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APQ13_RS02465 dfcbc1675e6b9364ccdcb3bf1864ef44 396 SUPERFAMILY SSF160240 211 288 1.2E-18 T 25-04-2016 APQ13_RS01835 58a17813ad4a48c069196e8093cf6434 465 Pfam PF03577 Peptidase family C69 2 402 2.7E-200 T 25-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 APQ13_RS01835 58a17813ad4a48c069196e8093cf6434 465 PANTHER PTHR12994 3 458 5.6E-55 T 25-04-2016 APQ13_RS01835 58a17813ad4a48c069196e8093cf6434 465 PANTHER PTHR12994:SF17 3 458 5.6E-55 T 25-04-2016 APQ13_RS04405 dbd37bf69a2726fce0731dac377959b5 148 Gene3D G3DSA:1.10.10.10 7 73 1.0E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04405 dbd37bf69a2726fce0731dac377959b5 148 SUPERFAMILY SSF46785 10 132 1.1E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 Gene3D G3DSA:1.10.510.10 111 333 2.6E-50 T 25-04-2016 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 PANTHER PTHR24362:SF160 1 274 5.3E-115 T 25-04-2016 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 Pfam PF03793 PASTA domain 506 579 1.2E-12 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 Pfam PF03793 PASTA domain 370 432 6.1E-12 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 Pfam PF03793 PASTA domain 438 505 7.3E-13 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 42 - T 25-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 Pfam PF00069 Protein kinase domain 12 257 2.1E-53 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 25-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 SMART SM00220 12 270 3.0E-61 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 SMART SM00740 434 505 6.9E-12 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 SMART SM00740 506 579 0.33 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 SMART SM00740 366 433 7.7E-14 T 25-04-2016 IPR005543 PASTA domain APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 PANTHER PTHR24362 1 274 5.3E-115 T 25-04-2016 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 Gene3D G3DSA:3.30.200.20 7 110 1.7E-29 T 25-04-2016 APQ13_RS05560 cdb18b0f1078a329aa729f8749814308 616 SUPERFAMILY SSF56112 8 276 2.7E-78 T 25-04-2016 IPR011009 Protein kinase-like domain APQ13_RS08825 771467c7a93b8a7a9b79302b6b895130 280 Pfam PF03180 NLPA lipoprotein 32 280 1.5E-88 T 25-04-2016 IPR004872 Lipoprotein NlpA family APQ13_RS08825 771467c7a93b8a7a9b79302b6b895130 280 PIRSF PIRSF002854 1 280 8.0E-80 T 25-04-2016 IPR004872 Lipoprotein NlpA family APQ13_RS08825 771467c7a93b8a7a9b79302b6b895130 280 SUPERFAMILY SSF53850 31 280 6.47E-74 T 25-04-2016 APQ13_RS08825 771467c7a93b8a7a9b79302b6b895130 280 Gene3D G3DSA:3.40.190.10 29 164 3.9E-49 T 25-04-2016 APQ13_RS08825 771467c7a93b8a7a9b79302b6b895130 280 PANTHER PTHR30429 2 280 2.0E-79 T 25-04-2016 IPR004872 Lipoprotein NlpA family APQ13_RS04500 2f247c5be742fe42717e925236d70eeb 425 PANTHER PTHR30474:SF2 1 410 8.4E-128 T 25-04-2016 APQ13_RS04500 2f247c5be742fe42717e925236d70eeb 425 Pfam PF01098 Cell cycle protein 13 394 1.6E-87 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APQ13_RS04500 2f247c5be742fe42717e925236d70eeb 425 PANTHER PTHR30474 1 410 8.4E-128 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APQ13_RS06760 f37d32e85e1a1d93b569efcfe8af326a 181 Gene3D G3DSA:1.10.443.10 3 168 1.0E-29 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS06760 f37d32e85e1a1d93b569efcfe8af326a 181 PANTHER PTHR30349 5 178 9.4E-22 T 25-04-2016 APQ13_RS06760 f37d32e85e1a1d93b569efcfe8af326a 181 SUPERFAMILY SSF56349 3 169 8.83E-31 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APQ13_RS06760 f37d32e85e1a1d93b569efcfe8af326a 181 PANTHER PTHR30349:SF20 5 178 9.4E-22 T 25-04-2016 APQ13_RS06760 f37d32e85e1a1d93b569efcfe8af326a 181 Pfam PF00589 Phage integrase family 3 161 2.6E-19 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS02450 051bfc772da4b0fc4d0764b8b02fd7b3 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 210 2.4E-26 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02450 051bfc772da4b0fc4d0764b8b02fd7b3 213 Gene3D G3DSA:1.10.3720.10 8 209 1.7E-50 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02450 051bfc772da4b0fc4d0764b8b02fd7b3 213 PANTHER PTHR30614 1 213 7.8E-84 T 25-04-2016 APQ13_RS02450 051bfc772da4b0fc4d0764b8b02fd7b3 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 1.3E-29 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS02450 051bfc772da4b0fc4d0764b8b02fd7b3 213 PANTHER PTHR30614:SF11 1 213 7.8E-84 T 25-04-2016 APQ13_RS02450 051bfc772da4b0fc4d0764b8b02fd7b3 213 SUPERFAMILY SSF161098 10 198 6.93E-44 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS01875 802963cdc68ccd996b56959e5ec13718 337 Gene3D G3DSA:3.20.20.140 5 334 2.3E-96 T 25-04-2016 APQ13_RS01875 802963cdc68ccd996b56959e5ec13718 337 SUPERFAMILY SSF51556 4 335 1.5E-74 T 25-04-2016 IPR032466 Metal-dependent hydrolase APQ13_RS01875 802963cdc68ccd996b56959e5ec13718 337 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 9 330 7.3E-83 T 25-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 APQ13_RS01875 802963cdc68ccd996b56959e5ec13718 337 Hamap MF_00540 Adenosine deaminase [add]. 3 331 57.8 T 25-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APQ13_RS01875 802963cdc68ccd996b56959e5ec13718 337 Pfam PF00962 Adenosine/AMP deaminase 10 327 1.1E-58 T 25-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 APQ13_RS01875 802963cdc68ccd996b56959e5ec13718 337 PANTHER PTHR11409 10 334 4.9E-87 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF69360 161 200 1.57E-6 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1355 1418 2.8E-23 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1420 1474 1.8E-21 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1225 1288 6.3E-24 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1097 1157 6.3E-18 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1290 1353 2.8E-23 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1161 1223 1.6E-19 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 1164 1223 1.9E-13 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:3.20.20.80 610 665 3.3E-25 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:3.20.20.80 383 577 3.3E-25 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 1341 1405 3.8E-13 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 1224 1271 6.9E-11 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 1272 1340 1.8E-13 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 1406 1473 1.3E-13 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 1068 1163 2.8E-14 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:2.10.270.10 163 199 9.1E-5 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Pfam PF02324 Glycosyl hydrolase family 70 269 1074 0.0 T 25-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF51445 829 985 8.16E-27 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Gene3D G3DSA:3.20.20.80 852 935 2.7E-19 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF69360 1284 1473 1.96E-34 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Pfam PF01473 Putative cell wall binding repeat 1280 1299 0.0098 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Pfam PF01473 Putative cell wall binding repeat 1345 1364 0.0098 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Pfam PF01473 Putative cell wall binding repeat 1088 1106 3.5E-4 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 Pfam PF01473 Putative cell wall binding repeat 1410 1429 0.0098 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF51445 605 678 6.87E-30 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF51445 230 280 6.87E-30 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF51445 399 571 6.87E-30 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 SUPERFAMILY SSF69360 1065 1281 2.75E-38 T 25-04-2016 APQ13_RS03205 c62f7982553f80c26b107ae79ebd9b1e 1476 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 4 25 2.4E-5 T 25-04-2016 IPR022263 KxYKxGKxW signal peptide APQ13_RS06750 677c8449ee09ea474b9546a23f56a6e0 178 SUPERFAMILY SSF56784 12 101 9.57E-10 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS06750 677c8449ee09ea474b9546a23f56a6e0 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 101 3.1E-9 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS06750 677c8449ee09ea474b9546a23f56a6e0 178 Pfam PF05595 Domain of unknown function (DUF771) 133 173 1.4E-7 T 25-04-2016 IPR008489 Protein of unknown function DUF771 APQ13_RS06750 677c8449ee09ea474b9546a23f56a6e0 178 Gene3D G3DSA:3.40.50.1000 18 101 2.0E-8 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05930 034ff9d1c2db2f72bfabd69fcd301f0b 146 Pfam PF13673 Acetyltransferase (GNAT) domain 45 144 5.3E-19 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS05930 034ff9d1c2db2f72bfabd69fcd301f0b 146 Gene3D G3DSA:3.40.630.30 12 143 2.1E-33 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS05930 034ff9d1c2db2f72bfabd69fcd301f0b 146 PANTHER PTHR13355 16 145 6.0E-30 T 25-04-2016 APQ13_RS05930 034ff9d1c2db2f72bfabd69fcd301f0b 146 SUPERFAMILY SSF55729 6 145 2.87E-33 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS05930 034ff9d1c2db2f72bfabd69fcd301f0b 146 PANTHER PTHR13355:SF8 16 145 6.0E-30 T 25-04-2016 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 Pfam PF01791 DeoC/LacD family aldolase 21 282 2.3E-76 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 PANTHER PTHR39340:SF1 1 325 8.9E-135 T 25-04-2016 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 3 325 3.6E-187 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 SMART SM01133 21 283 2.1E-33 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 PANTHER PTHR39340 1 325 8.9E-135 T 25-04-2016 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 SUPERFAMILY SSF51569 7 322 8.06E-70 T 25-04-2016 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 325 209.985 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS01050 072450b198a77450f051eb73db3dbaa9 325 Gene3D G3DSA:3.20.20.70 5 324 6.6E-133 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 Gene3D G3DSA:2.40.150.20 1 122 2.9E-51 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.6E-56 T 25-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.5E-52 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 SMART SM01374 1 122 3.9E-83 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.008 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 PANTHER PTHR11761 1 122 1.0E-71 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 SUPERFAMILY SSF50193 1 122 3.01E-49 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APQ13_RS08450 e899bf0ddaf4facc39af42be636cb5b2 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 25-04-2016 IPR019972 Ribosomal protein L14P, conserved site APQ13_RS04540 3a5e2a8eeab656d62fd0d0c7befea0a2 157 Pfam PF04073 Aminoacyl-tRNA editing domain 39 147 4.8E-17 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APQ13_RS04540 3a5e2a8eeab656d62fd0d0c7befea0a2 157 Gene3D G3DSA:3.90.960.10 3 156 2.0E-39 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APQ13_RS04540 3a5e2a8eeab656d62fd0d0c7befea0a2 157 PANTHER PTHR30411 42 157 1.9E-35 T 25-04-2016 APQ13_RS04540 3a5e2a8eeab656d62fd0d0c7befea0a2 157 SUPERFAMILY SSF55826 12 155 8.5E-32 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APQ13_RS04540 3a5e2a8eeab656d62fd0d0c7befea0a2 157 PANTHER PTHR30411:SF0 42 157 1.9E-35 T 25-04-2016 APQ13_RS04540 3a5e2a8eeab656d62fd0d0c7befea0a2 157 PIRSF PIRSF006181 5 157 4.1E-49 T 25-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 700 2.6E-14 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 702 748 8.4E-4 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 546 596 8.1E-4 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 SUPERFAMILY SSF101904 496 814 5.1E-68 T 25-04-2016 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 467 6.2E-148 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Gene3D G3DSA:3.90.199.10 329 394 5.6E-116 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Gene3D G3DSA:3.90.199.10 26 231 5.6E-116 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Gene3D G3DSA:2.120.10.90 495 814 1.0E-64 T 25-04-2016 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 PANTHER PTHR10169:SF47 4 818 0.0 T 25-04-2016 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 SUPERFAMILY SSF56719 27 482 2.22E-164 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 5 742 0.0 T 25-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 3 817 33.246 T 25-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 PANTHER PTHR10169 4 818 0.0 T 25-04-2016 APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 Gene3D G3DSA:3.30.1360.40 232 328 1.5E-34 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain APQ13_RS02330 e7d7c2cecb267e36e888b63226a8e948 818 SMART SM00434 7 460 4.5E-249 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 6.5E-166 T 25-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.352 T 25-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 SUPERFAMILY SSF89095 297 401 3.66E-32 T 25-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 25-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 Pfam PF02637 GatB domain 327 474 1.1E-51 T 25-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 SUPERFAMILY SSF55931 4 295 9.16E-119 T 25-04-2016 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 SMART SM00845 327 474 5.1E-70 T 25-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 PANTHER PTHR11659 2 477 5.6E-245 T 25-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 PANTHER PTHR11659:SF0 2 477 5.6E-245 T 25-04-2016 APQ13_RS09300 aa61d35ea93ce98b22d7c4bfde721697 477 Pfam PF02934 GatB/GatE catalytic domain 6 288 6.1E-109 T 25-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 561 573 - T 25-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 7 907 17.363 T 25-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 907 3.5E-258 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PANTHER PTHR30523:SF0 3 907 0.0 T 25-04-2016 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 SUPERFAMILY SSF51621 17 907 1.41E-289 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 25-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 397 417 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 736 762 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 243 258 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 601 630 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 559 579 1.1E-52 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 PANTHER PTHR30523 3 907 0.0 T 25-04-2016 APQ13_RS04505 44da6ce8686940887dc5fb6a5f5f43ba 907 Gene3D G3DSA:1.20.1440.90 272 400 1.6E-29 T 25-04-2016 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 PANTHER PTHR18968 1 562 1.3E-291 T 25-04-2016 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 562 1.1E-232 T 25-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 SUPERFAMILY SSF52518 8 178 2.4E-60 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 PANTHER PTHR18968:SF116 1 562 1.3E-291 T 25-04-2016 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 SUPERFAMILY SSF52467 193 360 6.74E-55 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 Gene3D G3DSA:3.40.50.970 11 184 5.8E-72 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 335 3.7E-44 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 Gene3D G3DSA:3.40.50.970 354 554 2.0E-69 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 176 6.1E-58 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 SUPERFAMILY SSF52518 370 561 2.86E-61 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 539 3.5E-45 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 Gene3D G3DSA:3.40.50.1220 194 353 1.4E-59 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APQ13_RS06725 cc11e6a80b6fa5ebebd5ff470ab22a96 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 25-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APQ13_RS06635 37b54e61bb3f7554ebcf5000c1821929 144 PANTHER PTHR10093 1 140 4.0E-42 T 25-04-2016 APQ13_RS06635 37b54e61bb3f7554ebcf5000c1821929 144 Pfam PF01592 NifU-like N terminal domain 10 127 2.6E-27 T 25-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APQ13_RS06635 37b54e61bb3f7554ebcf5000c1821929 144 Gene3D G3DSA:3.90.1010.10 9 141 4.1E-42 T 25-04-2016 APQ13_RS06635 37b54e61bb3f7554ebcf5000c1821929 144 SUPERFAMILY SSF82649 2 141 9.16E-49 T 25-04-2016 APQ13_RS06635 37b54e61bb3f7554ebcf5000c1821929 144 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 139 2.3E-54 T 25-04-2016 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 PANTHER PTHR31377 1 368 1.3E-153 T 25-04-2016 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 Hamap MF_01841 Agmatine deiminase [aguA]. 8 368 60.355 T 25-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 16 367 7.3E-120 T 25-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 PANTHER PTHR31377:SF0 1 368 1.3E-153 T 25-04-2016 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 Gene3D G3DSA:3.75.10.10 5 368 7.0E-148 T 25-04-2016 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 SUPERFAMILY SSF55909 5 368 1.96E-139 T 25-04-2016 APQ13_RS06570 2147bad1b1c54927b26bbfa1743f72c8 369 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 8 368 4.5E-176 T 25-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 APQ13_RS05865 c9258794088a8ab84132e8b59f9a6ebd 344 PANTHER PTHR41253 1 344 8.3E-33 T 25-04-2016 APQ13_RS05865 c9258794088a8ab84132e8b59f9a6ebd 344 Pfam PF05975 Bacterial ABC transporter protein EcsB 157 326 6.9E-44 T 25-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 APQ13_RS05865 c9258794088a8ab84132e8b59f9a6ebd 344 Pfam PF05975 Bacterial ABC transporter protein EcsB 3 154 3.6E-35 T 25-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 Pfam PF01022 Bacterial regulatory protein, arsR family 291 336 2.1E-11 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 PANTHER PTHR33154 241 347 2.9E-15 T 25-04-2016 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 PANTHER PTHR33154:SF11 241 347 2.9E-15 T 25-04-2016 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 318 333 7.2E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 286 301 7.2E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 333 348 7.2E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 SMART SM00418 284 357 2.6E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 Gene3D G3DSA:1.10.10.10 266 353 5.8E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07920 4cf441b0533abc487f005d562c961f48 365 SUPERFAMILY SSF46785 278 360 4.29E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Gene3D G3DSA:3.30.1490.20 146 208 4.3E-25 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 280 308 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 94 105 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 SUPERFAMILY SSF52440 3 126 5.56E-30 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 PANTHER PTHR23132 1 345 4.4E-152 T 25-04-2016 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Gene3D G3DSA:3.30.470.20 209 337 1.2E-50 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Gene3D G3DSA:3.30.470.20 117 134 1.2E-50 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 PANTHER PTHR23132:SF8 1 345 4.4E-152 T 25-04-2016 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Gene3D G3DSA:3.40.50.20 1 116 9.0E-31 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 338 38.949 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 PIRSF PIRSF039102 1 346 1.5E-103 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Pfam PF07478 D-ala D-ala ligase C-terminus 137 334 4.2E-74 T 25-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 SUPERFAMILY SSF56059 127 337 2.23E-56 T 25-04-2016 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 Pfam PF01820 D-ala D-ala ligase N-terminus 6 116 2.7E-25 T 25-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS05000 0a2cc37b8c1e10d7d92ddcbbe779151a 349 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 337 5.2E-99 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 84 97 - T 25-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 PRINTS PR00340 P-II protein signature 2 17 7.9E-23 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 PRINTS PR00340 P-II protein signature 84 104 7.9E-23 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 PRINTS PR00340 P-II protein signature 53 76 7.9E-23 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 Gene3D G3DSA:3.30.70.120 1 113 4.3E-42 T 25-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 SUPERFAMILY SSF54913 1 113 2.0E-36 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 PANTHER PTHR30115 1 113 6.4E-45 T 25-04-2016 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 106 9.8E-36 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APQ13_RS00335 da9deee53fd881fb3c9d95f01452e6b1 113 SMART SM00938 4 106 9.1E-47 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 PANTHER PTHR30349:SF17 188 355 2.2E-102 T 25-04-2016 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 PANTHER PTHR30349:SF17 11 159 2.2E-102 T 25-04-2016 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 Pfam PF00589 Phage integrase family 191 344 1.2E-23 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 Hamap MF_01816 Tyrosine recombinase XerS [xerS]. 1 356 58.523 T 25-04-2016 IPR023670 Tyrosine recombinase XerS GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 Gene3D G3DSA:1.10.150.130 32 123 3.9E-12 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 PANTHER PTHR30349 188 355 2.2E-102 T 25-04-2016 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 PANTHER PTHR30349 11 159 2.2E-102 T 25-04-2016 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 Gene3D G3DSA:1.10.443.10 186 353 7.3E-38 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 SUPERFAMILY SSF56349 185 353 7.06E-34 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APQ13_RS03110 ba69f2c0ff9c6de01c09135683995ba4 356 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 33 122 7.3E-7 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 213.612 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 Gene3D G3DSA:3.40.440.10 195 264 1.2E-72 T 25-04-2016 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 Gene3D G3DSA:3.40.440.10 1 93 1.2E-72 T 25-04-2016 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 SMART SM00788 3 422 3.8E-298 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 Pfam PF00709 Adenylosuccinate synthetase 4 420 8.8E-183 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 PANTHER PTHR11846 4 426 1.0E-258 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 Gene3D G3DSA:1.10.300.10 100 194 1.5E-38 T 25-04-2016 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 25-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 SUPERFAMILY SSF52540 1 427 1.7E-177 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 1.1E-190 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 25-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APQ13_RS06555 b63bbe71dc5d237cce5eeb35978ac446 429 Gene3D G3DSA:3.90.170.10 265 423 1.3E-70 T 25-04-2016 APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 195 41.54 T 25-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 Gene3D G3DSA:3.20.19.10 1 191 5.8E-46 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 184 1.8E-67 T 25-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 SUPERFAMILY SSF52016 1 193 1.75E-57 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 Pfam PF00694 Aconitase C-terminal domain 1 124 5.4E-39 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 PANTHER PTHR11670:SF27 1 196 4.2E-93 T 25-04-2016 APQ13_RS01550 edbcdafa9d068a59aa5d4d9ecf5f5450 196 PANTHER PTHR11670 1 196 4.2E-93 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 PANTHER PTHR33867:SF1 7 162 8.7E-39 T 25-04-2016 APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 PANTHER PTHR33867 7 162 8.7E-39 T 25-04-2016 APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 SUPERFAMILY SSF75420 8 91 1.02E-23 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 13 163 20.891 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 Pfam PF02576 Putative ribosome maturation factor RimP 19 159 5.4E-35 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 SUPERFAMILY SSF74942 92 162 8.5E-18 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 Gene3D G3DSA:2.30.30.180 96 161 2.8E-26 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APQ13_RS05845 de28893d7789b1e245f64249d014ffd5 163 Gene3D G3DSA:3.30.300.70 10 88 3.2E-23 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APQ13_RS05755 87ace4cff8c283a9456696047afb188b 203 SUPERFAMILY SSF46689 6 73 4.44E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS05755 87ace4cff8c283a9456696047afb188b 203 PANTHER PTHR30328:SF20 1 197 9.1E-22 T 25-04-2016 APQ13_RS05755 87ace4cff8c283a9456696047afb188b 203 PANTHER PTHR30328 1 197 9.1E-22 T 25-04-2016 APQ13_RS05755 87ace4cff8c283a9456696047afb188b 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 2.7E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS05755 87ace4cff8c283a9456696047afb188b 203 Pfam PF14278 Transcriptional regulator C-terminal region 93 169 2.8E-8 T 25-04-2016 APQ13_RS05755 87ace4cff8c283a9456696047afb188b 203 Gene3D G3DSA:1.10.357.10 10 190 5.1E-24 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 Pfam PF00696 Amino acid kinase family 2 276 7.8E-45 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 Pfam PF13840 ACT domain 380 444 2.8E-10 T 25-04-2016 IPR027795 GATS-like ACT domain APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 PIRSF PIRSF000726 1 452 1.2E-83 T 25-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 SUPERFAMILY SSF53633 1 288 9.69E-69 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 PANTHER PTHR21499 3 452 2.0E-136 T 25-04-2016 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 25-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 Gene3D G3DSA:3.40.1160.10 1 54 2.7E-50 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 Gene3D G3DSA:3.40.1160.10 105 288 2.7E-50 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 SUPERFAMILY SSF55021 372 450 4.58E-22 T 25-04-2016 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 SUPERFAMILY SSF55021 298 359 1.95E-9 T 25-04-2016 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 PANTHER PTHR21499:SF3 3 452 2.0E-136 T 25-04-2016 APQ13_RS09610 5c74c4406e5210a03229a7444af7e1dd 452 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 4.2E-84 T 25-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Pfam PF00117 Glutamine amidotransferase class-I 12 194 1.3E-41 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 SUPERFAMILY SSF52317 8 205 6.17E-54 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00097 Anthranilate synthase component II signature 172 185 1.3E-6 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.3E-6 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.3E-6 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Pfam PF02540 NAD synthase 215 249 2.6E-7 T 25-04-2016 IPR022310 NAD/GMP synthase APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Gene3D G3DSA:3.40.50.620 218 392 2.3E-57 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.9E-6 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.9E-6 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.9E-6 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 53.661 T 25-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PANTHER PTHR11922:SF2 8 514 4.0E-284 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 4.7E-8 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 4.7E-8 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 4.7E-8 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 SUPERFAMILY SSF52402 192 410 7.5E-59 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Gene3D G3DSA:3.30.300.10 393 517 1.2E-50 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 SUPERFAMILY SSF54810 397 517 1.44E-49 T 25-04-2016 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Pfam PF00958 GMP synthase C terminal domain 425 516 2.4E-43 T 25-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 Gene3D G3DSA:3.40.50.880 7 217 1.5E-64 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 517 4.4E-151 T 25-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 199 5.7E-75 T 25-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APQ13_RS02965 b8f91683bbdc45f6f37d8bba8b4f480a 517 PANTHER PTHR11922 8 514 4.0E-284 T 25-04-2016 APQ13_RS06300 5a15aec3a4e289ba782700811d5f63eb 223 Pfam PF01694 Rhomboid family 52 190 2.3E-35 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APQ13_RS06300 5a15aec3a4e289ba782700811d5f63eb 223 PANTHER PTHR22936 11 190 1.5E-35 T 25-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APQ13_RS06300 5a15aec3a4e289ba782700811d5f63eb 223 SUPERFAMILY SSF144091 3 189 2.75E-38 T 25-04-2016 APQ13_RS06300 5a15aec3a4e289ba782700811d5f63eb 223 Gene3D G3DSA:1.20.1540.10 6 188 3.4E-38 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APQ13_RS06300 5a15aec3a4e289ba782700811d5f63eb 223 PANTHER PTHR22936:SF4 11 190 1.5E-35 T 25-04-2016 APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 Pfam PF01205 Uncharacterized protein family UPF0029 17 121 9.3E-29 T 25-04-2016 IPR001498 Impact, N-terminal APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 77 106 - T 25-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 Gene3D G3DSA:3.30.70.240 133 206 8.4E-7 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 PANTHER PTHR16301 2 196 6.7E-57 T 25-04-2016 IPR023582 Impact family APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 SUPERFAMILY SSF54211 3 129 4.93E-42 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 PANTHER PTHR16301:SF0 2 196 6.7E-57 T 25-04-2016 APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 3 195 1.2E-60 T 25-04-2016 IPR015796 Impact family, bacterial/archaeal APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 SUPERFAMILY SSF54980 136 197 4.46E-6 T 25-04-2016 IPR009022 Elongation factor G, III-V domain APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 Pfam PF09186 Domain of unknown function (DUF1949) 138 193 4.3E-8 T 25-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APQ13_RS05500 b9fa13e04217c638974193573e5bc90a 209 Gene3D G3DSA:3.30.230.30 3 130 5.7E-47 T 25-04-2016 IPR001498 Impact, N-terminal APQ13_RS04870 ea23c830de8e299688c1c2a8b9d58b4e 154 PANTHER PTHR35790:SF1 29 147 1.5E-18 T 25-04-2016 APQ13_RS04870 ea23c830de8e299688c1c2a8b9d58b4e 154 Gene3D G3DSA:1.10.10.10 27 143 6.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04870 ea23c830de8e299688c1c2a8b9d58b4e 154 SMART SM00347 29 129 4.4E-14 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS04870 ea23c830de8e299688c1c2a8b9d58b4e 154 PANTHER PTHR35790 29 147 1.5E-18 T 25-04-2016 APQ13_RS04870 ea23c830de8e299688c1c2a8b9d58b4e 154 SUPERFAMILY SSF46785 20 144 5.17E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04870 ea23c830de8e299688c1c2a8b9d58b4e 154 Pfam PF01047 MarR family 36 92 1.5E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 Gene3D G3DSA:3.30.470.10 3 160 8.7E-64 T 25-04-2016 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 Pfam PF01063 Amino-transferase class IV 56 293 4.3E-32 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 PANTHER PTHR11825 4 338 3.0E-155 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 SUPERFAMILY SSF56752 3 336 1.96E-98 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 30 339 1.2E-136 T 25-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 PIRSF PIRSF006468 2 341 4.3E-118 T 25-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 Gene3D G3DSA:3.20.10.10 161 325 8.8E-56 T 25-04-2016 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 25-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APQ13_RS02335 ac2c67800db0c74b40c064793ac6b054 341 PANTHER PTHR11825:SF2 4 338 3.0E-155 T 25-04-2016 APQ13_RS08410 acdf8ce2dec3f68a78f33def7a80dfb3 99 SUPERFAMILY SSF54189 1 91 7.91E-29 T 25-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08410 acdf8ce2dec3f68a78f33def7a80dfb3 99 PANTHER PTHR11620 1 93 9.4E-31 T 25-04-2016 APQ13_RS08410 acdf8ce2dec3f68a78f33def7a80dfb3 99 Gene3D G3DSA:3.30.70.330 1 94 8.0E-33 T 25-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APQ13_RS08410 acdf8ce2dec3f68a78f33def7a80dfb3 99 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 25-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site APQ13_RS08410 acdf8ce2dec3f68a78f33def7a80dfb3 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 95 21.593 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08410 acdf8ce2dec3f68a78f33def7a80dfb3 99 Pfam PF00276 Ribosomal protein L23 5 89 9.6E-30 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APQ13_RS01415 190e155b5799b76ae3fa1e9adbd29e17 391 Gene3D G3DSA:1.20.1250.20 11 194 3.6E-21 T 25-04-2016 APQ13_RS01415 190e155b5799b76ae3fa1e9adbd29e17 391 PANTHER PTHR23501 1 380 1.9E-14 T 25-04-2016 APQ13_RS01415 190e155b5799b76ae3fa1e9adbd29e17 391 Gene3D G3DSA:1.20.1250.20 208 387 1.2E-10 T 25-04-2016 APQ13_RS01415 190e155b5799b76ae3fa1e9adbd29e17 391 SUPERFAMILY SSF103473 1 380 2.88E-42 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS01415 190e155b5799b76ae3fa1e9adbd29e17 391 Pfam PF07690 Major Facilitator Superfamily 19 348 1.6E-28 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS01470 95d2958587d8e02f811f907ae78e2eca 94 SUPERFAMILY SSF47413 12 76 2.57E-10 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS01470 95d2958587d8e02f811f907ae78e2eca 94 Gene3D G3DSA:1.10.260.40 21 79 1.3E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS01470 95d2958587d8e02f811f907ae78e2eca 94 SMART SM00530 21 76 6.0E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS01470 95d2958587d8e02f811f907ae78e2eca 94 Pfam PF01381 Helix-turn-helix 22 74 3.5E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Gene3D G3DSA:3.40.50.980 158 328 2.7E-33 T 25-04-2016 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 SUPERFAMILY SSF47336 556 625 2.75E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 PANTHER PTHR22754:SF26 139 631 2.8E-50 T 25-04-2016 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Gene3D G3DSA:3.40.50.980 2 157 9.8E-15 T 25-04-2016 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Pfam PF00501 AMP-binding enzyme 13 432 7.5E-55 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Pfam PF00550 Phosphopantetheine attachment site 570 624 5.2E-10 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Gene3D G3DSA:1.10.1200.10 558 628 6.4E-12 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 PANTHER PTHR22754 139 631 2.8E-50 T 25-04-2016 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Gene3D G3DSA:3.30.300.30 425 530 1.3E-10 T 25-04-2016 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 Gene3D G3DSA:2.30.38.10 352 424 2.4E-17 T 25-04-2016 APQ13_RS01660 1be716191fdd4ee4c68bcf746f3f20aa 632 SUPERFAMILY SSF56801 3 534 4.58E-79 T 25-04-2016 APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 237 9.9E-32 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 PANTHER PTHR10000 1 271 5.6E-84 T 25-04-2016 APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 Gene3D G3DSA:3.30.1240.10 88 183 1.9E-18 T 25-04-2016 APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 265 1.4E-66 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 SUPERFAMILY SSF56784 2 270 2.01E-73 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 PANTHER PTHR10000:SF1 1 271 5.6E-84 T 25-04-2016 APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 265 6.0E-62 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 Gene3D G3DSA:3.40.50.1000 184 271 1.6E-55 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04375 82c4b5d55d753cd899770ae196d31ffe 273 Gene3D G3DSA:3.40.50.1000 1 77 1.6E-55 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 SUPERFAMILY SSF51735 259 540 8.37E-83 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 Pfam PF03949 Malic enzyme, NAD binding domain 259 514 4.0E-95 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PIRSF PIRSF000106 2 540 2.3E-201 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PANTHER PTHR23406 6 540 5.1E-225 T 25-04-2016 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 SUPERFAMILY SSF53223 4 258 5.97E-94 T 25-04-2016 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 Gene3D G3DSA:3.40.50.10380 4 256 3.3E-95 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 SMART SM01274 67 249 2.2E-83 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PANTHER PTHR23406:SF34 6 540 5.1E-225 T 25-04-2016 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 Pfam PF00390 Malic enzyme, N-terminal domain 68 249 5.9E-65 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 SMART SM00919 259 515 7.1E-103 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 255 271 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 171 193 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 135 164 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 393 409 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 230 248 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 73 97 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 PRINTS PR00072 Malic enzyme signature 286 302 1.6E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 ProSitePatterns PS00331 Malic enzymes signature. 255 271 - T 25-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APQ13_RS07045 2f3793147467c0337ea8aede393bf774 540 Gene3D G3DSA:3.40.50.720 257 540 1.6E-96 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 SUPERFAMILY SSF52540 6 233 3.22E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 Gene3D G3DSA:3.40.50.300 4 226 1.2E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 SMART SM00382 35 223 4.4E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 PANTHER PTHR24220:SF433 8 232 5.6E-72 T 25-04-2016 APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 Pfam PF00005 ABC transporter 27 175 2.4E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08155 a51e1ec5c346704a227288f3bd560ebf 252 PANTHER PTHR24220 8 232 5.6E-72 T 25-04-2016 APQ13_RS04835 251ff4635bfb3fbdac683e15948221a2 166 Gene3D G3DSA:3.40.630.30 1 158 4.0E-26 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04835 251ff4635bfb3fbdac683e15948221a2 166 PANTHER PTHR23091 1 157 6.9E-22 T 25-04-2016 APQ13_RS04835 251ff4635bfb3fbdac683e15948221a2 166 Pfam PF13673 Acetyltransferase (GNAT) domain 57 149 1.9E-15 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS04835 251ff4635bfb3fbdac683e15948221a2 166 SUPERFAMILY SSF55729 1 154 1.69E-25 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS07745 23873befddec3056308d98857aaf3c98 180 PANTHER PTHR14269 6 168 1.9E-45 T 25-04-2016 APQ13_RS07745 23873befddec3056308d98857aaf3c98 180 PIRSF PIRSF000847 2 180 1.9E-49 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APQ13_RS07745 23873befddec3056308d98857aaf3c98 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 74 1.0E-16 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APQ13_RS07745 23873befddec3056308d98857aaf3c98 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APQ13_RS07745 23873befddec3056308d98857aaf3c98 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 6 169 1.1E-52 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 SUPERFAMILY SSF50621 237 366 8.02E-49 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 Pfam PF00842 Alanine racemase, C-terminal domain 243 366 2.9E-39 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 SUPERFAMILY SSF51419 13 243 2.18E-60 T 25-04-2016 IPR029066 PLP-binding barrel APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 Gene3D G3DSA:3.20.20.10 15 221 8.0E-67 T 25-04-2016 IPR029066 PLP-binding barrel APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 TIGRFAM TIGR00492 alr: alanine racemase 8 366 5.2E-110 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 Gene3D G3DSA:2.40.37.10 222 368 2.1E-56 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PANTHER PTHR30511:SF0 3 369 6.8E-145 T 25-04-2016 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 Hamap MF_01201 Alanine racemase. 6 367 34.203 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 67 85 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 258 273 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 275 290 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 201 228 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 295 312 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 161 172 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 32 48 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 349 362 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PRINTS PR00992 Alanine racemase signature 127 139 2.2E-66 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 5.4E-62 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 47 - T 25-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 SMART SM01005 242 367 1.1E-67 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS09235 140e7304d85ed02a35161737286d1be5 371 PANTHER PTHR30511 3 369 6.8E-145 T 25-04-2016 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Pfam PF01473 Putative cell wall binding repeat 215 232 4.5E-5 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Pfam PF01473 Putative cell wall binding repeat 150 167 0.0011 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 PANTHER PTHR10655:SF24 385 651 4.8E-12 T 25-04-2016 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Pfam PF04650 YSIRK type signal peptide 4 28 2.6E-6 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 SUPERFAMILY SSF53474 452 649 1.35E-20 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 SUPERFAMILY SSF69360 150 296 1.1E-32 T 25-04-2016 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Gene3D G3DSA:2.10.270.10 228 295 6.2E-16 T 25-04-2016 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Pfam PF10503 Esterase PHB depolymerase 531 589 2.3E-6 T 25-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Gene3D G3DSA:3.40.50.1820 453 662 6.0E-24 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 38 8.8E-10 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 Gene3D G3DSA:2.10.270.10 157 227 5.0E-18 T 25-04-2016 APQ13_RS04265 31b9ac6fdb0feab32691212aa4690aa1 726 PANTHER PTHR10655 385 651 4.8E-12 T 25-04-2016 APQ13_RS01435 1c88ba7213d48fdb09525113bbb7281c 1345 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 4 1041 0.0 T 25-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 APQ13_RS01435 1c88ba7213d48fdb09525113bbb7281c 1345 Pfam PF13395 HNH endonuclease 821 871 1.0E-15 T 25-04-2016 IPR003615 HNH nuclease APQ13_RS01435 1c88ba7213d48fdb09525113bbb7281c 1345 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 3 1337 20.387 T 25-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 APQ13_RS01435 1c88ba7213d48fdb09525113bbb7281c 1345 Pfam PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 1081 1335 5.2E-48 T 25-04-2016 IPR032237 CRISPR-associated endonuclease Cas9, PAM-interacting domain APQ13_RS01435 1c88ba7213d48fdb09525113bbb7281c 1345 Pfam PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 62 94 9.9E-12 T 25-04-2016 IPR032239 CRISPR-associated endonuclease Cas9, bridge helix APQ13_RS01435 1c88ba7213d48fdb09525113bbb7281c 1345 Pfam PF16592 REC lobe of CRISPR-associated endonuclease Cas9 181 713 1.6E-216 T 25-04-2016 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 5.7E-86 T 25-04-2016 IPR003797 DegV APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 PANTHER PTHR33434 1 281 4.0E-71 T 25-04-2016 APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 PANTHER PTHR33434:SF3 1 281 4.0E-71 T 25-04-2016 APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 1.6E-80 T 25-04-2016 IPR003797 DegV APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 Gene3D G3DSA:3.30.1180.10 158 283 4.6E-38 T 25-04-2016 APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 SUPERFAMILY SSF82549 1 283 3.4E-80 T 25-04-2016 APQ13_RS06945 63b9763789a52ee2946321e6b869c6e6 286 Gene3D G3DSA:3.40.50.10170 1 152 1.2E-42 T 25-04-2016 APQ13_RS03695 d986b2ffe7b44c9d43a6f7cf58c5bf94 359 SUPERFAMILY SSF56601 44 328 5.45E-50 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS03695 d986b2ffe7b44c9d43a6f7cf58c5bf94 359 Pfam PF00144 Beta-lactamase 46 332 2.3E-29 T 25-04-2016 IPR001466 Beta-lactamase-related APQ13_RS03695 d986b2ffe7b44c9d43a6f7cf58c5bf94 359 Gene3D G3DSA:3.40.710.10 50 345 4.2E-45 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS03695 d986b2ffe7b44c9d43a6f7cf58c5bf94 359 PANTHER PTHR22935:SF1 43 334 3.6E-29 T 25-04-2016 APQ13_RS03695 d986b2ffe7b44c9d43a6f7cf58c5bf94 359 PANTHER PTHR22935 43 334 3.6E-29 T 25-04-2016 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 SUPERFAMILY SSF53681 1 116 2.16E-38 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 Gene3D G3DSA:3.40.50.1860 114 215 3.6E-36 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 SUPERFAMILY SSF53681 118 228 1.96E-34 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 Gene3D G3DSA:3.40.50.1860 1 113 4.1E-46 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 PANTHER PTHR21198 1 227 2.5E-81 T 25-04-2016 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 25-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 25-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 2.9E-77 T 25-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 5.8E-64 T 25-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07350 7494de304361fd6ccbcf70cc8efb8e22 230 PANTHER PTHR21198:SF7 1 227 2.5E-81 T 25-04-2016 APQ13_RS07285 e81c3f08be5ff3e2deca0e0e851ed6fc 433 PANTHER PTHR11206 5 421 8.7E-73 T 25-04-2016 APQ13_RS07285 e81c3f08be5ff3e2deca0e0e851ed6fc 433 PIRSF PIRSF006603 2 428 1.6E-81 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07285 e81c3f08be5ff3e2deca0e0e851ed6fc 433 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 401 4.1E-65 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07285 e81c3f08be5ff3e2deca0e0e851ed6fc 433 Pfam PF01554 MatE 13 171 9.3E-30 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07285 e81c3f08be5ff3e2deca0e0e851ed6fc 433 Pfam PF01554 MatE 227 387 2.2E-25 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07285 e81c3f08be5ff3e2deca0e0e851ed6fc 433 PANTHER PTHR11206:SF95 5 421 8.7E-73 T 25-04-2016 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 PRINTS PR00298 60kDa chaperonin signature 396 417 1.5E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 PRINTS PR00298 60kDa chaperonin signature 82 109 1.5E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 PRINTS PR00298 60kDa chaperonin signature 26 52 1.5E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 PRINTS PR00298 60kDa chaperonin signature 266 289 1.5E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 PRINTS PR00298 60kDa chaperonin signature 348 373 1.5E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 PANTHER PTHR11353 1 542 1.7E-237 T 25-04-2016 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 Gene3D G3DSA:3.50.7.10 195 365 3.5E-94 T 25-04-2016 IPR027409 GroEL-like apical domain APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 5.0E-103 T 25-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 41.019 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 SUPERFAMILY SSF54849 136 205 5.72E-26 T 25-04-2016 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 25-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 Gene3D G3DSA:1.10.560.10 3 194 7.4E-49 T 25-04-2016 IPR027413 GroEL-like equatorial domain APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 SUPERFAMILY SSF48592 6 133 9.16E-79 T 25-04-2016 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 SUPERFAMILY SSF48592 404 518 9.16E-79 T 25-04-2016 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 SUPERFAMILY SSF52029 182 374 1.32E-83 T 25-04-2016 IPR027409 GroEL-like apical domain APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 522 8.4E-253 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APQ13_RS08770 1945de7cecf83efcd741e317c392b91f 542 Gene3D G3DSA:1.10.560.10 366 515 2.5E-43 T 25-04-2016 IPR027413 GroEL-like equatorial domain APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 SMART SM00354 6 76 1.2E-37 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 SUPERFAMILY SSF53822 66 333 8.44E-68 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 Gene3D G3DSA:3.40.50.2300 177 313 6.2E-35 T 25-04-2016 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 PANTHER PTHR30146 6 333 5.8E-119 T 25-04-2016 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 TIGRFAM TIGR01481 ccpA: catabolite control protein A 5 333 4.6E-163 T 25-04-2016 IPR006377 Catabolite control protein A GO:0006355 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 Gene3D G3DSA:1.10.260.40 7 58 1.3E-27 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 SUPERFAMILY SSF47413 6 64 1.61E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 PANTHER PTHR30146:SF4 6 333 5.8E-119 T 25-04-2016 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 7.1E-22 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 Pfam PF13377 Periplasmic binding protein-like domain 175 332 3.6E-26 T 25-04-2016 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 8.1E-7 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 8.1E-7 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00630 80b51fb2856bfdf7a2af21b8e6c9790d 333 Gene3D G3DSA:3.40.50.2300 59 176 8.0E-44 T 25-04-2016 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 153 3.2E-62 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 PANTHER PTHR10173:SF6 1 151 5.6E-66 T 25-04-2016 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 SUPERFAMILY SSF55068 1 155 2.49E-68 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 Pfam PF01625 Peptide methionine sulfoxide reductase 4 154 1.6E-60 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 160 35.597 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 PANTHER PTHR10173 1 151 5.6E-66 T 25-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APQ13_RS00495 a298e6f711f165c586a482e7293fdc5f 169 Gene3D G3DSA:3.30.1060.10 1 154 3.1E-68 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 107 2.4E-26 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 Pfam PF00825 Ribonuclease P 1 104 9.0E-30 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 50 64 - T 25-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 SUPERFAMILY SSF54211 1 111 3.29E-31 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 109 17.865 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 100 1.0E-48 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 PANTHER PTHR33992 1 113 1.9E-29 T 25-04-2016 APQ13_RS06230 5e08e524fc18268c4642a71134692785 119 Gene3D G3DSA:3.30.230.10 1 111 1.3E-35 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS04000 de222ec6c1294a37d453979b7f4fc1fb 311 PANTHER PTHR22916 1 214 1.3E-29 T 25-04-2016 APQ13_RS04000 de222ec6c1294a37d453979b7f4fc1fb 311 Gene3D G3DSA:3.90.550.10 1 230 4.0E-43 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS04000 de222ec6c1294a37d453979b7f4fc1fb 311 SUPERFAMILY SSF53448 2 239 1.59E-47 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS04000 de222ec6c1294a37d453979b7f4fc1fb 311 Pfam PF00535 Glycosyl transferase family 2 5 116 9.3E-22 T 25-04-2016 IPR001173 Glycosyltransferase 2-like APQ13_RS04000 de222ec6c1294a37d453979b7f4fc1fb 311 PANTHER PTHR22916:SF23 1 214 1.3E-29 T 25-04-2016 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Gene3D G3DSA:3.40.50.720 226 360 2.1E-25 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Gene3D G3DSA:3.40.50.720 1 149 5.7E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 SUPERFAMILY SSF51735 226 361 4.71E-21 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 SUPERFAMILY SSF51735 1 149 1.76E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Pfam PF02254 TrkA-N domain 229 346 1.8E-18 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Pfam PF02254 TrkA-N domain 3 122 1.8E-24 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PANTHER PTHR13789 1 447 1.1E-39 T 25-04-2016 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 SUPERFAMILY SSF116726 135 219 7.59E-14 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Pfam PF02080 TrkA-C domain 384 449 2.7E-13 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Pfam PF02080 TrkA-C domain 152 216 1.9E-12 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Gene3D G3DSA:3.30.70.1450 152 222 4.8E-10 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 Gene3D G3DSA:3.30.70.1450 381 449 6.5E-12 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.6E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.6E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.6E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.6E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.6E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 SUPERFAMILY SSF116726 373 448 9.02E-15 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00100 cd943f96bdc33f352c1ce1b6faf6e222 451 PANTHER PTHR13789:SF225 1 447 1.1E-39 T 25-04-2016 APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 PANTHER PTHR24220 11 237 3.0E-80 T 25-04-2016 APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 Pfam PF00005 ABC transporter 25 163 3.4E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 PANTHER PTHR24220:SF464 11 237 3.0E-80 T 25-04-2016 APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 SUPERFAMILY SSF52540 8 223 1.11E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 SMART SM00382 34 211 2.1E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02955 e807e4f67d9af706c1d45a1480b849c8 286 Gene3D G3DSA:3.40.50.300 4 225 8.7E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 PANTHER PTHR10947:SF0 90 202 3.0E-21 T 25-04-2016 APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 PANTHER PTHR10947 90 202 3.0E-21 T 25-04-2016 APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 Gene3D G3DSA:3.30.1940.10 20 91 7.4E-27 T 25-04-2016 IPR027855 Domain of unknown function DUF4479 APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 Gene3D G3DSA:2.40.50.140 92 201 2.0E-37 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 Pfam PF14794 Domain of unknown function (DUF4479) 22 91 1.3E-26 T 25-04-2016 IPR027855 Domain of unknown function DUF4479 APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 SUPERFAMILY SSF50249 92 199 5.88E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08700 e0633974dad558d6f0756315ba703c9a 208 Pfam PF01588 Putative tRNA binding domain 96 198 5.9E-18 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 SMART SM00116 322 370 0.32 T 25-04-2016 IPR000644 CBS domain APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 SMART SM00116 262 310 1.2E-8 T 25-04-2016 IPR000644 CBS domain APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 Gene3D G3DSA:3.10.580.10 255 371 1.1E-23 T 25-04-2016 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 SMART SM00382 31 217 4.0E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 Gene3D G3DSA:3.40.50.300 2 240 3.6E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 SUPERFAMILY SSF52540 6 244 1.6E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 PANTHER PTHR24220 8 378 8.3E-173 T 25-04-2016 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 Pfam PF00005 ABC transporter 23 167 3.9E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 Pfam PF00571 CBS domain 315 367 8.2E-5 T 25-04-2016 IPR000644 CBS domain APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 Pfam PF00571 CBS domain 255 302 2.0E-10 T 25-04-2016 IPR000644 CBS domain APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 SUPERFAMILY SSF54631 253 379 1.08E-24 T 25-04-2016 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 PANTHER PTHR24220:SF350 8 378 8.3E-173 T 25-04-2016 APQ13_RS07885 38727e6c47cdeab8277f668e644d6926 383 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 16 375 1.6E-134 T 25-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 Gene3D G3DSA:3.30.420.40 1 107 1.3E-38 T 25-04-2016 APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 Gene3D G3DSA:3.30.420.40 108 289 9.7E-61 T 25-04-2016 APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 Pfam PF00480 ROK family 5 289 5.9E-85 T 25-04-2016 IPR000600 ROK family APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 PANTHER PTHR18964 1 293 3.0E-80 T 25-04-2016 APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 PANTHER PTHR18964:SF10 1 293 3.0E-80 T 25-04-2016 APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 ProSitePatterns PS01125 ROK family signature. 131 156 - T 25-04-2016 IPR000600 ROK family APQ13_RS09210 265752712f4e5bfd2b01e37a518a4925 293 SUPERFAMILY SSF53067 4 289 2.7E-42 T 25-04-2016 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 SUPERFAMILY SSF75304 2 481 8.11E-153 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 475 1.3E-187 T 25-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 Pfam PF01425 Amidase 24 463 7.4E-150 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 475 88.2 T 25-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 ProSitePatterns PS00571 Amidases signature. 150 181 - T 25-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 PANTHER PTHR11895:SF7 2 481 1.4E-214 T 25-04-2016 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 PANTHER PTHR11895 2 481 1.4E-214 T 25-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS09295 7f6d848c2339eed84e55b6813321bda3 488 Gene3D G3DSA:3.90.1300.10 3 482 1.2E-166 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PANTHER PTHR11946 3 624 1.5E-294 T 25-04-2016 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 495 4.6E-168 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Gene3D G3DSA:2.170.220.10 118 236 7.3E-46 T 25-04-2016 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 SUPERFAMILY SSF50249 562 668 2.69E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Gene3D G3DSA:3.40.50.620 4 115 1.9E-72 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Gene3D G3DSA:3.40.50.620 237 347 1.9E-72 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PRINTS PR01041 Methionyl-tRNA synthetase signature 361 372 1.1E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 1.1E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.1E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.1E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.1E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PRINTS PR01041 Methionyl-tRNA synthetase signature 269 284 1.1E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 PANTHER PTHR11946:SF1 3 624 1.5E-294 T 25-04-2016 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 SUPERFAMILY SSF47323 363 579 5.61E-43 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Gene3D G3DSA:1.10.730.10 350 521 5.8E-50 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 520 48.691 T 25-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Pfam PF01588 Putative tRNA binding domain 572 666 5.1E-25 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 SUPERFAMILY SSF52374 4 360 1.31E-102 T 25-04-2016 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Pfam PF09334 tRNA synthetases class I (M) 7 373 4.6E-110 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 668 4.1E-40 T 25-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APQ13_RS00420 7a56069626d7d04c3fa5e669b522b948 669 Gene3D G3DSA:2.40.50.140 559 668 9.1E-40 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 Pfam PF01546 Peptidase family M20/M25/M40 86 454 2.9E-34 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 PANTHER PTHR11014 289 456 4.3E-108 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 PANTHER PTHR11014 1 269 4.3E-108 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 Gene3D G3DSA:3.30.70.360 212 369 1.1E-49 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 PANTHER PTHR11014:SF15 289 456 4.3E-108 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 PANTHER PTHR11014:SF15 1 269 4.3E-108 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 Gene3D G3DSA:3.40.630.10 19 211 7.8E-52 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 Gene3D G3DSA:3.40.630.10 397 456 7.8E-52 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 SUPERFAMILY SSF53187 371 456 1.03E-48 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 SUPERFAMILY SSF53187 15 201 1.03E-48 T 25-04-2016 APQ13_RS08830 c025d426d46d7358d8397e8110ad205e 457 Pfam PF07687 Peptidase dimerisation domain 199 358 3.9E-16 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PANTHER PTHR21256 28 427 7.4E-197 T 25-04-2016 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 424 43.124 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 Gene3D G3DSA:3.40.50.1980 221 369 1.8E-67 T 25-04-2016 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 25-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 Pfam PF00815 Histidinol dehydrogenase 25 423 5.2E-169 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.7E-166 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 Gene3D G3DSA:3.40.50.1980 28 220 1.1E-84 T 25-04-2016 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 SUPERFAMILY SSF53720 29 424 1.0E-83 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 3.0E-90 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS01985 65b615742d5c14974a15c71d33ed13ef 427 PIRSF PIRSF000099 2 427 1.6E-167 T 25-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APQ13_RS00665 4700959a5a9017d9e18ced42e538a0f5 174 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 53 1.8E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS00665 4700959a5a9017d9e18ced42e538a0f5 174 Pfam PF14278 Transcriptional regulator C-terminal region 77 153 7.8E-9 T 25-04-2016 APQ13_RS00665 4700959a5a9017d9e18ced42e538a0f5 174 PANTHER PTHR30055:SF55 5 174 2.1E-14 T 25-04-2016 APQ13_RS00665 4700959a5a9017d9e18ced42e538a0f5 174 Gene3D G3DSA:1.10.357.10 5 171 9.0E-15 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS00665 4700959a5a9017d9e18ced42e538a0f5 174 PANTHER PTHR30055 5 174 2.1E-14 T 25-04-2016 APQ13_RS00665 4700959a5a9017d9e18ced42e538a0f5 174 SUPERFAMILY SSF46689 5 62 7.18E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS06000 7bdd1afc7e06c54d75e50f461e160259 152 Gene3D G3DSA:1.10.10.10 7 134 1.1E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06000 7bdd1afc7e06c54d75e50f461e160259 152 SUPERFAMILY SSF46785 7 131 4.6E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06000 7bdd1afc7e06c54d75e50f461e160259 152 SMART SM00347 25 125 2.7E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS06000 7bdd1afc7e06c54d75e50f461e160259 152 PANTHER PTHR33164 7 150 2.3E-16 T 25-04-2016 APQ13_RS06000 7bdd1afc7e06c54d75e50f461e160259 152 Pfam PF01047 MarR family 32 89 1.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 SUPERFAMILY SSF51445 5 476 1.49E-156 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 Pfam PF00232 Glycosyl hydrolase family 1 5 475 1.5E-132 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PANTHER PTHR10353:SF74 7 478 1.8E-280 T 25-04-2016 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 6.9E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 6.9E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 6.9E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 6.9E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 6.9E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 25-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 PANTHER PTHR10353 7 478 1.8E-280 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS02795 caecd254f2e15ee3aad0c02e28b9c066 478 Gene3D G3DSA:3.20.20.80 6 476 3.4E-145 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 SUPERFAMILY SSF55811 1 150 3.38E-29 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 Pfam PF00293 NUDIX domain 21 143 3.0E-18 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 PANTHER PTHR22769:SF37 11 152 7.6E-26 T 25-04-2016 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 Gene3D G3DSA:3.90.79.10 7 149 6.6E-29 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 PANTHER PTHR22769 11 152 7.6E-26 T 25-04-2016 APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 PRINTS PR00502 NUDIX hydrolase family signature 57 72 1.2E-5 T 25-04-2016 IPR020476 NUDIX hydrolase APQ13_RS00525 b9906574152423cd1acd6ecf35f34949 174 PRINTS PR00502 NUDIX hydrolase family signature 43 57 1.2E-5 T 25-04-2016 IPR020476 NUDIX hydrolase APQ13_RS03860 96d1e43b6cc73db102b6654e8512ea99 190 PANTHER PTHR12677:SF26 2 178 8.3E-17 T 25-04-2016 APQ13_RS03860 96d1e43b6cc73db102b6654e8512ea99 190 Pfam PF09335 SNARE associated Golgi protein 61 176 4.5E-21 T 25-04-2016 IPR032816 SNARE associated Golgi protein APQ13_RS03860 96d1e43b6cc73db102b6654e8512ea99 190 PANTHER PTHR12677 2 178 8.3E-17 T 25-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 473 893 6.8E-31 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 SUPERFAMILY SSF52540 356 817 2.77E-110 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 SUPERFAMILY SSF52540 26 203 2.77E-110 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 SUPERFAMILY SSF52540 873 900 2.77E-110 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070:SF14 29 205 3.1E-276 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070:SF14 872 1205 3.1E-276 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070:SF14 766 828 3.1E-276 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070:SF14 551 749 3.1E-276 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070:SF14 340 532 3.1E-276 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 25 1210 16.695 T 25-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 SUPERFAMILY SSF52980 1008 1195 1.72E-24 T 25-04-2016 IPR011335 Restriction endonuclease type II-like APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070 29 205 3.1E-276 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070 872 1205 3.1E-276 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070 766 828 3.1E-276 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070 551 749 3.1E-276 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 PANTHER PTHR11070 340 532 3.1E-276 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:1.10.486.10 615 766 1.4E-18 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:3.90.320.10 1038 1195 4.9E-11 T 25-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:3.40.50.300 366 465 7.8E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:3.40.50.300 28 91 7.8E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:3.40.50.300 123 186 7.8E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 28 1206 0.0 T 25-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1041 1191 1.8E-10 T 25-04-2016 APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:3.40.50.300 779 935 3.4E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Gene3D G3DSA:3.40.50.300 477 604 3.4E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01025 15b3168b9a0ee3cb1f28b50134605287 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 464 7.7E-77 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 PANTHER PTHR30446 1 199 8.7E-108 T 25-04-2016 APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 Pfam PF13662 Toprim domain 80 172 3.7E-23 T 25-04-2016 IPR006171 Toprim domain APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.9E-82 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 SUPERFAMILY SSF111304 1 199 2.75E-73 T 25-04-2016 IPR023627 Recombination protein RecR APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 SMART SM00493 80 166 1.0E-14 T 25-04-2016 IPR006171 Toprim domain APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 25-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 Pfam PF02132 RecR protein 39 78 1.5E-14 T 25-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 PANTHER PTHR30446:SF0 1 199 8.7E-108 T 25-04-2016 APQ13_RS05005 d56ddb4348cae3e75ccc6d012dfa2105 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.46 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 Gene3D G3DSA:3.90.470.20 115 206 4.9E-25 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 104 205 2.8E-15 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 147 190 0.009 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 PANTHER PTHR12215 14 171 3.8E-39 T 25-04-2016 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 103 213 1.9E-12 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 SUPERFAMILY SSF56214 1 96 9.42E-25 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 SUPERFAMILY SSF56214 104 224 2.27E-26 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS01715 8a02d4942726669226ba3b54866461d6 230 Gene3D G3DSA:3.90.470.20 3 114 4.4E-34 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APQ13_RS05515 3f2dee1f18d9fc17eee1aae14d2ee760 222 SUPERFAMILY SSF51569 1 217 1.36E-57 T 25-04-2016 APQ13_RS05515 3f2dee1f18d9fc17eee1aae14d2ee760 222 Pfam PF00923 Transaldolase 3 207 1.6E-41 T 25-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APQ13_RS05515 3f2dee1f18d9fc17eee1aae14d2ee760 222 Gene3D G3DSA:3.20.20.70 1 216 5.9E-52 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05515 3f2dee1f18d9fc17eee1aae14d2ee760 222 PANTHER PTHR10683:SF11 1 219 1.4E-82 T 25-04-2016 APQ13_RS05515 3f2dee1f18d9fc17eee1aae14d2ee760 222 PANTHER PTHR10683 1 219 1.4E-82 T 25-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 SUPERFAMILY SSF52833 1 125 7.25E-40 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 Gene3D G3DSA:3.40.30.10 1 125 1.6E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 1.6E-36 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.406 T 25-04-2016 IPR023731 Regulatory protein Spx GO:0045892 APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 PANTHER PTHR30041:SF5 1 134 7.1E-71 T 25-04-2016 APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 PANTHER PTHR30041 1 134 7.1E-71 T 25-04-2016 APQ13_RS02605 ff6ef1bb383ec0988a0776a726d437e7 137 Pfam PF03960 ArsC family 21 113 2.4E-25 T 25-04-2016 IPR006660 Arsenate reductase-like APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 SMART SM00382 51 185 6.8E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 Gene3D G3DSA:1.10.10.10 257 327 1.9E-32 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 PANTHER PTHR13779:SF25 3 331 4.2E-173 T 25-04-2016 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 Gene3D G3DSA:1.10.8.60 185 255 2.8E-32 T 25-04-2016 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 5.8E-114 T 25-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 SUPERFAMILY SSF46785 257 328 3.36E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 329 1.0E-40 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 1.0E-140 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 Gene3D G3DSA:3.40.50.300 20 175 1.4E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 SUPERFAMILY SSF52540 20 251 1.18E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 331 166.127 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 PANTHER PTHR13779 3 331 4.2E-173 T 25-04-2016 APQ13_RS07310 85b8a7a07f58f8be2b1ecbeb813b88fb 331 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 2.7E-31 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 Gene3D G3DSA:3.40.350.10 3 131 1.3E-25 T 25-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 SUPERFAMILY SSF55920 132 358 2.62E-75 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 204 9.543448E-5 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 PRINTS PR00599 Methionine aminopeptidase-1 signature 213 229 9.543448E-5 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 PRINTS PR00599 Methionine aminopeptidase-1 signature 311 323 9.543448E-5 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 133 1.0E-19 T 25-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 289 301 - T 25-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 PANTHER PTHR10804 16 357 4.1E-167 T 25-04-2016 APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 PANTHER PTHR10804:SF106 16 357 4.1E-167 T 25-04-2016 APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 Pfam PF00557 Metallopeptidase family M24 143 343 1.6E-56 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 Gene3D G3DSA:3.90.230.10 133 356 2.4E-78 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00625 b9c9a4f09c3e5fe9d0f8e1336c15a244 359 SUPERFAMILY SSF53092 1 131 3.49E-25 T 25-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 569 2.6E-193 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 PANTHER PTHR30562:SF1 2 588 5.6E-261 T 25-04-2016 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Gene3D G3DSA:3.40.1440.10 16 91 1.1E-8 T 25-04-2016 IPR027299 GIY-YIG domain APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 27.194 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Pfam PF01541 GIY-YIG catalytic domain 17 90 1.6E-10 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 SUPERFAMILY SSF46600 184 235 2.35E-11 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Gene3D G3DSA:1.10.150.20 537 589 9.3E-17 T 25-04-2016 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 SUPERFAMILY SSF82771 15 97 5.36E-22 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Gene3D G3DSA:4.10.860.10 184 230 3.2E-13 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Pfam PF02151 UvrB/uvrC motif 196 228 1.4E-9 T 25-04-2016 IPR001943 UVR domain GO:0005515 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 373 523 4.3E-50 T 25-04-2016 IPR001162 UvrC family homology region APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 PANTHER PTHR30562 2 588 5.6E-261 T 25-04-2016 APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 SMART SM00465 15 95 5.1E-22 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily APQ13_RS02160 57bf2159de3bcb6815cc8582ffafe2f5 595 SUPERFAMILY SSF47781 502 592 5.72E-20 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 SUPERFAMILY SSF51569 1 293 2.93E-96 T 25-04-2016 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 PANTHER PTHR30304 1 293 2.1E-92 T 25-04-2016 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 PIRSF PIRSF001359 1 293 2.0E-116 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 Gene3D G3DSA:3.20.20.70 1 293 1.2E-102 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 293 1.9E-122 T 25-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 293 2.1E-91 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 133 144 - T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS07170 3cfa4e34522520a3c5777704c1f1e286 293 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 292 5.6E-95 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 PANTHER PTHR30055 1 161 2.3E-26 T 25-04-2016 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 SUPERFAMILY SSF46689 4 82 6.98E-19 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 6.0E-16 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 Gene3D G3DSA:1.10.357.10 5 189 7.9E-30 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.5E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.5E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01615 9a1040526a8812276eb58ba76cd2635c 193 PANTHER PTHR30055:SF66 1 161 2.3E-26 T 25-04-2016 APQ13_RS06605 905b8ba70e0fbc18f125749faa9495ca 343 Gene3D G3DSA:1.10.3720.10 135 338 1.9E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06605 905b8ba70e0fbc18f125749faa9495ca 343 PANTHER PTHR30465:SF75 21 342 8.6E-115 T 25-04-2016 APQ13_RS06605 905b8ba70e0fbc18f125749faa9495ca 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 339 1.5E-27 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06605 905b8ba70e0fbc18f125749faa9495ca 343 PANTHER PTHR30465 21 342 8.6E-115 T 25-04-2016 APQ13_RS06605 905b8ba70e0fbc18f125749faa9495ca 343 SUPERFAMILY SSF161098 135 323 1.57E-25 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06605 905b8ba70e0fbc18f125749faa9495ca 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 85 1.3E-14 T 25-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APQ13_RS02260 ea9494a7b04fd70580b9b277ea248db4 209 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 209 31.095 T 25-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02260 ea9494a7b04fd70580b9b277ea248db4 209 Gene3D G3DSA:3.40.50.2020 3 208 1.1E-57 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS02260 ea9494a7b04fd70580b9b277ea248db4 209 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 178 1.6E-47 T 25-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS02260 ea9494a7b04fd70580b9b277ea248db4 209 SUPERFAMILY SSF53271 9 208 2.49E-50 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS02260 ea9494a7b04fd70580b9b277ea248db4 209 Pfam PF00156 Phosphoribosyl transferase domain 47 190 8.4E-18 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APQ13_RS02260 ea9494a7b04fd70580b9b277ea248db4 209 PANTHER PTHR19278 3 203 9.7E-64 T 25-04-2016 APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 Pfam PF02687 FtsX-like permease family 717 835 8.5E-21 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 Gene3D G3DSA:3.40.50.300 1 224 1.0E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 Pfam PF00005 ABC transporter 21 169 1.1E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 SUPERFAMILY SSF52540 1 224 1.9E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 SMART SM00382 30 217 2.9E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 PANTHER PTHR24220 3 389 7.3E-114 T 25-04-2016 APQ13_RS01410 a691b637334c9cecb7872ac3890108f3 842 PANTHER PTHR24220:SF539 3 389 7.3E-114 T 25-04-2016 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 385 1.4E-159 T 25-04-2016 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|UniPathway: UPA00058 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 245 354 2.4E-14 T 25-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 47 151 3.4E-6 T 25-04-2016 IPR001099 Chalcone/stilbene synthase, N-terminal APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 SUPERFAMILY SSF53901 3 166 8.64E-34 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 PANTHER PTHR11877 3 385 2.6E-81 T 25-04-2016 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 SUPERFAMILY SSF53901 168 387 3.66E-63 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 Gene3D G3DSA:3.40.47.10 1 250 8.3E-78 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS03480 0364c1a2547b5674abb39b8c55ee56a3 391 PANTHER PTHR11877:SF26 3 385 2.6E-81 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 SUPERFAMILY SSF81271 382 455 4.14E-20 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Pfam PF04607 Region found in RelA / SpoT proteins 240 348 1.8E-37 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 SMART SM00471 46 158 5.2E-8 T 25-04-2016 IPR003607 HD/PDEase domain APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 737 3.8E-237 T 25-04-2016 IPR004811 RelA/SpoT family GO:0015969 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Pfam PF02824 TGS domain 395 454 1.3E-21 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Pfam PF13291 ACT domain 659 737 4.3E-19 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Gene3D G3DSA:3.10.20.30 394 456 1.5E-22 T 25-04-2016 IPR012675 Beta-grasp domain APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 SUPERFAMILY SSF81301 199 370 4.74E-64 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Gene3D G3DSA:3.30.460.10 199 329 1.5E-48 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Gene3D G3DSA:3.30.70.260 662 736 2.0E-11 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 SMART SM00954 240 349 1.4E-64 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 PANTHER PTHR21262 10 740 0.0 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 PANTHER PTHR21262:SF0 10 740 0.0 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 SUPERFAMILY SSF55021 662 737 1.46E-9 T 25-04-2016 APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 Pfam PF13328 HD domain 31 180 4.1E-48 T 25-04-2016 IPR003607 HD/PDEase domain APQ13_RS08305 68e889b05af831668533f7c8852d637f 740 SUPERFAMILY SSF109604 12 196 9.42E-76 T 25-04-2016 APQ13_RS01200 d32f617225ce012f628c4750f3384979 289 PANTHER PTHR22572 2 269 8.3E-182 T 25-04-2016 APQ13_RS01200 d32f617225ce012f628c4750f3384979 289 SUPERFAMILY SSF53448 1 286 1.06E-93 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS01200 d32f617225ce012f628c4750f3384979 289 Gene3D G3DSA:3.90.550.10 1 258 3.5E-72 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS01200 d32f617225ce012f628c4750f3384979 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.9E-153 T 25-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APQ13_RS01200 d32f617225ce012f628c4750f3384979 289 PANTHER PTHR22572:SF105 2 269 8.3E-182 T 25-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APQ13_RS01200 d32f617225ce012f628c4750f3384979 289 Pfam PF00483 Nucleotidyl transferase 2 237 4.5E-74 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 SUPERFAMILY SSF53850 1 181 3.26E-51 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 Gene3D G3DSA:3.40.190.10 1 90 1.9E-28 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 SUPERFAMILY SSF55021 173 269 3.56E-24 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 Gene3D G3DSA:3.30.70.260 187 271 7.1E-27 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 PANTHER PTHR21022:SF0 1 269 2.5E-98 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 Gene3D G3DSA:3.40.190.10 91 165 5.2E-24 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 Pfam PF00800 Prephenate dehydratase 3 179 6.1E-57 T 25-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 PANTHER PTHR21022 1 269 2.5E-98 T 25-04-2016 APQ13_RS04170 ce9314f91845786c1ee1cb50d95e434e 274 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 220 227 - T 25-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APQ13_RS03735 92ec269ca55aff204801524cfd3b4996 277 Gene3D G3DSA:1.10.3720.10 2 265 3.7E-53 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03735 92ec269ca55aff204801524cfd3b4996 277 SUPERFAMILY SSF161098 4 277 7.38E-59 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03735 92ec269ca55aff204801524cfd3b4996 277 PANTHER PTHR32243:SF24 1 277 1.6E-127 T 25-04-2016 APQ13_RS03735 92ec269ca55aff204801524cfd3b4996 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 271 2.8E-27 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03735 92ec269ca55aff204801524cfd3b4996 277 PANTHER PTHR32243 1 277 1.6E-127 T 25-04-2016 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 392 3.5E-160 T 25-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 395 54.062 T 25-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 25-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 SUPERFAMILY SSF52402 3 164 5.73E-47 T 25-04-2016 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 PANTHER PTHR11587:SF2 1 396 9.9E-215 T 25-04-2016 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 Gene3D G3DSA:3.90.1260.10 172 395 3.4E-89 T 25-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 Pfam PF00764 Arginosuccinate synthase 7 389 7.4E-172 T 25-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 SUPERFAMILY SSF69864 169 395 8.63E-90 T 25-04-2016 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 Gene3D G3DSA:3.40.50.620 4 169 9.1E-61 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 PANTHER PTHR11587 1 396 9.9E-215 T 25-04-2016 APQ13_RS06240 0bab721486b89a9e46abdc098cb31f7d 396 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 115 126 - T 25-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 385 3.5E-14 T 25-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PANTHER PTHR11482:SF5 10 416 9.6E-130 T 25-04-2016 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.4E-13 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 268 287 1.4E-13 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 1.4E-13 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.4E-13 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 SUPERFAMILY SSF50621 259 407 1.99E-45 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 Gene3D G3DSA:2.40.37.10 268 409 9.9E-45 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 SUPERFAMILY SSF51419 19 280 5.72E-55 T 25-04-2016 IPR029066 PLP-binding barrel APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 154 163 2.3E-11 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 2.3E-11 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 376 398 2.3E-11 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 295 313 2.3E-11 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 PANTHER PTHR11482 10 416 9.6E-130 T 25-04-2016 APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 Gene3D G3DSA:3.20.20.10 28 267 3.1E-59 T 25-04-2016 IPR029066 PLP-binding barrel APQ13_RS00040 19cfaf5ab60a094bcbfa4fae9370c3ed 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 30 278 6.3E-28 T 25-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APQ13_RS00160 fca2355603304d47ad7fbf97ff026b8a 364 PANTHER PTHR21716 7 351 9.9E-122 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS00160 fca2355603304d47ad7fbf97ff026b8a 364 Pfam PF01594 Domain of unknown function DUF20 19 349 3.1E-95 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS00160 fca2355603304d47ad7fbf97ff026b8a 364 PANTHER PTHR21716:SF10 7 351 9.9E-122 T 25-04-2016 APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 Gene3D G3DSA:3.10.129.10 3 126 7.3E-37 T 25-04-2016 IPR029069 HotDog domain APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 PANTHER PTHR31793:SF9 8 135 1.3E-30 T 25-04-2016 APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 SUPERFAMILY SSF54637 4 124 6.06E-30 T 25-04-2016 IPR029069 HotDog domain APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 110 5.5E-21 T 25-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 Pfam PF13279 Thioesterase-like superfamily 11 128 3.5E-14 T 25-04-2016 APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 PANTHER PTHR31793 8 135 1.3E-30 T 25-04-2016 APQ13_RS04130 3f7ad07f771e4572b7f8cc9618b358b9 135 PIRSF PIRSF003230 1 133 3.9E-27 T 25-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 Gene3D G3DSA:3.30.479.10 21 144 2.4E-39 T 25-04-2016 APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 SUPERFAMILY SSF55620 22 143 2.5E-37 T 25-04-2016 APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 PANTHER PTHR12589:SF5 14 148 5.3E-42 T 25-04-2016 APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 PANTHER PTHR12589 14 148 5.3E-42 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 25 114 6.4E-30 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 PIRSF PIRSF006113 20 143 3.4E-27 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APQ13_RS03595 33572a308523ae80755ddb12ef27079f 148 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 25 143 3.5E-36 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 SUPERFAMILY SSF100950 5 240 3.54E-74 T 25-04-2016 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 PIRSF PIRSF009451 1 511 1.7E-257 T 25-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 Gene3D G3DSA:3.40.1080.10 2 241 2.2E-107 T 25-04-2016 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 32 511 1.2E-237 T 25-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 PANTHER PTHR40596 2 511 6.2E-240 T 25-04-2016 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 45 511 6.4E-254 T 25-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 SUPERFAMILY SSF100950 244 510 9.02E-59 T 25-04-2016 APQ13_RS03125 1da4d2c9df18ca879382aab24d40d39c 511 Gene3D G3DSA:3.40.810.20 244 486 8.3E-80 T 25-04-2016 APQ13_RS02305 72fe025c021dc92fd774539281c41038 212 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 199 7.9E-52 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APQ13_RS02305 72fe025c021dc92fd774539281c41038 212 SMART SM01207 8 193 2.3E-74 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APQ13_RS02305 72fe025c021dc92fd774539281c41038 212 PANTHER PTHR30309:SF0 1 211 3.2E-73 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APQ13_RS02305 72fe025c021dc92fd774539281c41038 212 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 201 19.259 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APQ13_RS02305 72fe025c021dc92fd774539281c41038 212 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 192 8.0E-50 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APQ13_RS02305 72fe025c021dc92fd774539281c41038 212 PANTHER PTHR30309 1 211 3.2E-73 T 25-04-2016 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 PANTHER PTHR10108:SF927 4 288 2.8E-75 T 25-04-2016 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 Gene3D G3DSA:3.40.50.150 115 291 8.1E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 PANTHER PTHR10108 4 288 2.8E-75 T 25-04-2016 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 56 291 1.2E-99 T 25-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 SUPERFAMILY SSF51197 10 107 1.29E-29 T 25-04-2016 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 PIRSF PIRSF005215 2 293 1.2E-148 T 25-04-2016 IPR014431 Tellurite resistance methyltransferase, TehB type-2 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 SUPERFAMILY SSF53335 77 279 1.05E-24 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 Gene3D G3DSA:2.60.120.10 8 114 3.8E-38 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 1.8E-26 T 25-04-2016 IPR015392 Domain of unknown function DUF1971 APQ13_RS00395 54ac5cebf1a2d574984ac2a294d28768 293 Pfam PF03848 Tellurite resistance protein TehB 96 288 2.0E-86 T 25-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain APQ13_RS04185 7a070c9fa436233b868594112723828a 113 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 108 6.6E-26 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA APQ13_RS04185 7a070c9fa436233b868594112723828a 113 PANTHER PTHR41254 2 111 1.5E-30 T 25-04-2016 APQ13_RS04185 7a070c9fa436233b868594112723828a 113 Gene3D G3DSA:1.20.1500.10 1 112 1.5E-41 T 25-04-2016 IPR023378 YheA/YmcA-like domain APQ13_RS04185 7a070c9fa436233b868594112723828a 113 SUPERFAMILY SSF158622 3 111 1.57E-34 T 25-04-2016 IPR023378 YheA/YmcA-like domain APQ13_RS04185 7a070c9fa436233b868594112723828a 113 Hamap MF_01526 UPF0342 protein . 2 113 17.973 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 SMART SM00028 234 267 160.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 SMART SM00028 268 301 210.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 SMART SM00028 167 200 0.058 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 Gene3D G3DSA:1.25.40.10 146 402 5.0E-25 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 Pfam PF13181 Tetratricopeptide repeat 10 30 0.13 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 Pfam PF13181 Tetratricopeptide repeat 169 198 2.5E-6 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 Gene3D G3DSA:1.25.40.10 9 145 2.8E-10 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 PANTHER PTHR23083 5 409 8.8E-30 T 25-04-2016 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 SUPERFAMILY SSF48452 173 365 6.96E-21 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APQ13_RS01230 e2c7e41be55374b708f15e19d8831308 410 SUPERFAMILY SSF48452 9 124 6.96E-21 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APQ13_RS04915 3f4fafb943e06b44cf0c086a5dee2084 311 PANTHER PTHR10587 105 307 1.5E-33 T 25-04-2016 APQ13_RS04915 3f4fafb943e06b44cf0c086a5dee2084 311 Pfam PF01522 Polysaccharide deacetylase 104 226 4.6E-22 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APQ13_RS04915 3f4fafb943e06b44cf0c086a5dee2084 311 Gene3D G3DSA:3.20.20.370 84 310 2.4E-44 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APQ13_RS04915 3f4fafb943e06b44cf0c086a5dee2084 311 SUPERFAMILY SSF88713 103 308 1.68E-41 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 78 167 2.0E-47 T 25-04-2016 IPR004173 3H domain GO:0036094 APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 Gene3D G3DSA:1.10.10.10 1 62 8.0E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 SUPERFAMILY SSF46785 1 61 2.29E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 SUPERFAMILY SSF75500 70 173 1.19E-35 T 25-04-2016 IPR004173 3H domain GO:0036094 APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 PANTHER PTHR40068 1 174 2.7E-50 T 25-04-2016 APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 Pfam PF08279 HTH domain 6 58 8.9E-14 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 PIRSF PIRSF037847 1 174 3.3E-68 T 25-04-2016 IPR026043 Transcription repressor NadR APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 Gene3D G3DSA:3.30.1340.20 71 172 1.1E-36 T 25-04-2016 IPR004173 3H domain GO:0036094 APQ13_RS06255 b2324238b7be8fa3ff1def8744cb0f40 174 Pfam PF02829 3H domain 76 170 1.9E-33 T 25-04-2016 IPR004173 3H domain GO:0036094 APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 PANTHER PTHR31964 1 147 5.5E-35 T 25-04-2016 APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 PANTHER PTHR31964:SF45 1 147 5.5E-35 T 25-04-2016 APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 SUPERFAMILY SSF52402 4 146 2.34E-32 T 25-04-2016 APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 PRINTS PR01438 Universal stress protein signature 121 143 8.6E-18 T 25-04-2016 IPR006015 Universal stress protein A APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 PRINTS PR01438 Universal stress protein signature 103 115 8.6E-18 T 25-04-2016 IPR006015 Universal stress protein A APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 PRINTS PR01438 Universal stress protein signature 4 22 8.6E-18 T 25-04-2016 IPR006015 Universal stress protein A APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 PIRSF PIRSF006276 1 145 6.4E-18 T 25-04-2016 IPR006015 Universal stress protein A APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 Pfam PF00582 Universal stress protein family 4 143 6.9E-34 T 25-04-2016 IPR006016 UspA GO:0006950 APQ13_RS09260 afd03dc3d3ab27ecdfe7fff7653eb5c9 149 Gene3D G3DSA:3.40.50.620 4 143 1.2E-37 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 TIGRFAM TIGR04384 putr_carbamoyl: putrescine carbamoyltransferase 6 336 6.1E-178 T 25-04-2016 IPR024903 Putrescine carbamoyltransferase PtcA GO:0033390|GO:0050231 UniPathway: UPA00534 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 145 3.3E-43 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 309 1.3E-46 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PANTHER PTHR11405:SF43 2 316 5.3E-157 T 25-04-2016 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 SUPERFAMILY SSF53671 2 313 1.57E-89 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 3.5E-27 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 3.5E-27 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 3.5E-27 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 299 3.5E-27 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 Gene3D G3DSA:3.40.50.1370 142 298 1.2E-54 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 Gene3D G3DSA:3.40.50.1370 2 141 5.1E-49 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 6 311 9.1E-99 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PANTHER PTHR11405 2 316 5.3E-157 T 25-04-2016 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 Hamap MF_02102 Putrescine carbamoyltransferase [ptcA]. 3 339 61.959 T 25-04-2016 IPR024903 Putrescine carbamoyltransferase PtcA GO:0033390|GO:0050231 UniPathway: UPA00534 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 226 236 3.3E-23 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 3.3E-23 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 3.3E-23 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 290 301 3.3E-23 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS06580 8babedc7784c2c280bf200970ffe8697 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 3.3E-23 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APQ13_RS09325 21b8c3ddbb237e2104f220b530b1f2a2 205 Pfam PF14014 Protein of unknown function (DUF4230) 52 192 2.3E-6 T 25-04-2016 IPR025324 Protein of unknown function DUF4230 APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 SMART SM00855 4 153 7.4E-18 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 PANTHER PTHR23029:SF38 1 198 3.4E-56 T 25-04-2016 APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 187 8.8E-38 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 25-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 Gene3D G3DSA:3.40.50.1240 3 189 1.6E-42 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 SUPERFAMILY SSF53254 2 182 5.01E-44 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS02780 1f36ab85cfac39ba1c11f9648474aacc 198 PANTHER PTHR23029 1 198 3.4E-56 T 25-04-2016 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 Gene3D G3DSA:3.40.605.10 4 222 3.1E-96 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 Gene3D G3DSA:3.40.605.10 374 415 3.1E-96 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 Gene3D G3DSA:3.40.309.10 225 373 8.3E-45 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 Pfam PF00171 Aldehyde dehydrogenase family 76 282 1.9E-14 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 Pfam PF00171 Aldehyde dehydrogenase family 316 378 1.2E-5 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 SUPERFAMILY SSF53720 3 415 6.41E-112 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 344 - T 25-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 PANTHER PTHR11063:SF8 1 416 1.7E-170 T 25-04-2016 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 PIRSF PIRSF000151 1 416 4.0E-178 T 25-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 405 2.7E-155 T 25-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 PANTHER PTHR11063 1 416 1.7E-170 T 25-04-2016 APQ13_RS05710 0d41cea57fff09f06463f35295084d18 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 415 40.529 T 25-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS04060 a2f9952d9ecda52dc5fdfffaf064929f 154 Pfam PF00293 NUDIX domain 13 129 2.1E-15 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS04060 a2f9952d9ecda52dc5fdfffaf064929f 154 PANTHER PTHR22769 6 150 7.0E-25 T 25-04-2016 APQ13_RS04060 a2f9952d9ecda52dc5fdfffaf064929f 154 Gene3D G3DSA:3.90.79.10 9 137 1.4E-26 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS04060 a2f9952d9ecda52dc5fdfffaf064929f 154 PANTHER PTHR22769:SF30 6 150 7.0E-25 T 25-04-2016 APQ13_RS04060 a2f9952d9ecda52dc5fdfffaf064929f 154 SUPERFAMILY SSF55811 12 141 1.21E-25 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS04340 df0290fc8e4e990382540c9265e3be5f 145 Pfam PF10263 SprT-like family 7 141 1.3E-19 T 25-04-2016 IPR006640 SprT-like APQ13_RS04340 df0290fc8e4e990382540c9265e3be5f 145 SMART SM00731 1 142 6.5E-46 T 25-04-2016 IPR006640 SprT-like APQ13_RS04340 df0290fc8e4e990382540c9265e3be5f 145 Hamap MF_00745 Protein SprT-like. 1 142 38.329 T 25-04-2016 IPR023524 Uncharacterised protein family SprT-like APQ13_RS04340 df0290fc8e4e990382540c9265e3be5f 145 PANTHER PTHR41243:SF1 1 144 4.5E-56 T 25-04-2016 APQ13_RS04340 df0290fc8e4e990382540c9265e3be5f 145 PANTHER PTHR41243 1 144 4.5E-56 T 25-04-2016 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 12 204 2.5E-51 T 25-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 SMART SM00983 139 202 4.6E-17 T 25-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 Gene3D G3DSA:3.40.50.10240 3 111 1.2E-24 T 25-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 PANTHER PTHR41299:SF1 1 210 4.7E-42 T 25-04-2016 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 SUPERFAMILY SSF63999 1 126 6.41E-33 T 25-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 19 110 2.5E-18 T 25-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 140 200 1.2E-6 T 25-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APQ13_RS06140 4109b9da797f220074ba4e3c4fc30a60 210 PANTHER PTHR41299 1 210 4.7E-42 T 25-04-2016 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 Gene3D G3DSA:1.10.10.10 10 61 7.4E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 PRINTS PR01467 Bacterial arginine repressor signature 87 100 3.1E-19 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 PRINTS PR01467 Bacterial arginine repressor signature 22 35 3.1E-19 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 PRINTS PR01467 Bacterial arginine repressor signature 38 53 3.1E-19 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 PRINTS PR01467 Bacterial arginine repressor signature 117 132 3.1E-19 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 Hamap MF_00173 Arginine repressor [argR]. 1 151 50.345 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 Pfam PF01316 Arginine repressor, DNA binding domain 3 59 3.7E-20 T 25-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 90 126 3.0E-11 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 SUPERFAMILY SSF46785 3 62 3.13E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 Pfam PF02863 Arginine repressor, C-terminal domain 80 144 4.3E-20 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 PANTHER PTHR34471:SF1 1 152 4.5E-37 T 25-04-2016 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 PANTHER PTHR34471 1 152 4.5E-37 T 25-04-2016 APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 Gene3D G3DSA:3.30.1360.40 71 147 3.4E-25 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain APQ13_RS07975 49ec8a99d3a728bbabd724660d2bdecf 156 SUPERFAMILY SSF55252 78 147 6.8E-21 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 302 1.6E-23 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 1.9E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 1.9E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.9E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 1.9E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 Gene3D G3DSA:3.40.50.1370 149 283 2.8E-44 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 10 306 38.591 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 Gene3D G3DSA:3.40.50.1370 11 148 2.6E-42 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 SUPERFAMILY SSF53671 9 305 2.14E-86 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 11 151 1.6E-31 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PANTHER PTHR11405 11 307 1.7E-118 T 25-04-2016 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 1.6E-28 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 1.6E-28 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 1.6E-28 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 1.6E-28 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 138 155 1.6E-28 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 1.6E-28 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 11 304 1.5E-89 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APQ13_RS03845 a8955dc17c37711a85374d4c0cc10cdc 308 PANTHER PTHR11405:SF16 11 307 1.7E-118 T 25-04-2016 APQ13_RS03690 ce10d28914dec1f3ac7184455f315adf 167 SMART SM00014 57 165 1.3E-6 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS03690 ce10d28914dec1f3ac7184455f315adf 167 Pfam PF01569 PAP2 superfamily 59 165 1.9E-12 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS03690 ce10d28914dec1f3ac7184455f315adf 167 SUPERFAMILY SSF48317 30 165 5.89E-21 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS03690 ce10d28914dec1f3ac7184455f315adf 167 PANTHER PTHR14969:SF21 35 166 4.8E-25 T 25-04-2016 APQ13_RS03690 ce10d28914dec1f3ac7184455f315adf 167 Gene3D G3DSA:1.20.144.10 10 165 8.1E-20 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APQ13_RS03690 ce10d28914dec1f3ac7184455f315adf 167 PANTHER PTHR14969 35 166 4.8E-25 T 25-04-2016 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 Gene3D G3DSA:3.40.50.1000 3 72 1.1E-55 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 Gene3D G3DSA:3.40.50.1000 182 279 1.1E-55 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 273 5.1E-54 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 SUPERFAMILY SSF56784 3 276 5.22E-63 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 PANTHER PTHR10000:SF25 4 279 5.8E-89 T 25-04-2016 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 297 410 2.2E-26 T 25-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 PIRSF PIRSF037492 1 461 6.6E-268 T 25-04-2016 IPR017223 Predicted hydrolase of the HAD superfamily, SPs0319-type APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 ProSitePatterns PS01229 Hypothetical cof family signature 2. 227 249 - T 25-04-2016 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 PANTHER PTHR10000 4 279 5.8E-89 T 25-04-2016 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 273 1.8E-71 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 Gene3D G3DSA:1.10.3420.10 289 455 1.1E-55 T 25-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 246 7.5E-26 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS09255 62ac0ba3f4f83d53d4c356c5ba644467 461 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS07270 e9b17660b4807bef30f1e16ae2edadee 236 Gene3D G3DSA:3.40.50.1240 1 227 7.6E-51 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS07270 e9b17660b4807bef30f1e16ae2edadee 236 SUPERFAMILY SSF53254 4 226 1.24E-47 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS07270 e9b17660b4807bef30f1e16ae2edadee 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 217 1.1E-29 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS07270 e9b17660b4807bef30f1e16ae2edadee 236 PANTHER PTHR23029 1 220 4.5E-74 T 25-04-2016 APQ13_RS07270 e9b17660b4807bef30f1e16ae2edadee 236 PANTHER PTHR23029:SF29 1 220 4.5E-74 T 25-04-2016 APQ13_RS07270 e9b17660b4807bef30f1e16ae2edadee 236 SMART SM00855 5 182 3.7E-18 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 Gene3D G3DSA:3.40.50.300 4 240 1.6E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 PANTHER PTHR24220 7 244 6.3E-142 T 25-04-2016 APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 PIRSF PIRSF039085 2 244 2.4E-117 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 SMART SM00382 30 217 5.7E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 PANTHER PTHR24220:SF327 7 244 6.3E-142 T 25-04-2016 APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 SUPERFAMILY SSF52540 5 239 1.18E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05140 a49edb267bb1fe205561b47668acdc62 244 Pfam PF00005 ABC transporter 21 169 2.2E-37 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 PANTHER PTHR30346 1 302 6.7E-44 T 25-04-2016 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 9.2E-21 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 PANTHER PTHR30346:SF0 1 302 6.7E-44 T 25-04-2016 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.8E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.8E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.8E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 SUPERFAMILY SSF53850 85 292 1.3E-14 T 25-04-2016 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 Pfam PF03466 LysR substrate binding domain 118 294 3.4E-8 T 25-04-2016 IPR005119 LysR, substrate-binding APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 Gene3D G3DSA:3.40.190.10 117 197 1.6E-7 T 25-04-2016 APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 SUPERFAMILY SSF46785 1 87 8.82E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03540 758e4b68f1a5e2bedf47b5552953bb88 303 Gene3D G3DSA:1.10.10.10 1 80 2.0E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03040 885053c0ca7bcc2e02889686c9287f88 188 Gene3D G3DSA:2.40.320.10 4 171 1.7E-15 T 25-04-2016 IPR023577 CYTH domain APQ13_RS03040 885053c0ca7bcc2e02889686c9287f88 188 PIRSF PIRSF012526 1 188 1.1E-77 T 25-04-2016 IPR009195 Uncharacterised protein family YjbK KEGG: 00230+3.6.1.-|KEGG: 00332+3.6.1.-|KEGG: 00790+3.6.1.- APQ13_RS03040 885053c0ca7bcc2e02889686c9287f88 188 PANTHER PTHR41266 1 182 1.6E-54 T 25-04-2016 APQ13_RS03040 885053c0ca7bcc2e02889686c9287f88 188 SUPERFAMILY SSF55154 2 185 1.8E-30 T 25-04-2016 IPR033469 CYTH-like domain APQ13_RS03040 885053c0ca7bcc2e02889686c9287f88 188 Pfam PF01928 CYTH domain 4 182 9.1E-30 T 25-04-2016 IPR023577 CYTH domain APQ13_RS03040 885053c0ca7bcc2e02889686c9287f88 188 SMART SM01118 3 186 5.0E-21 T 25-04-2016 IPR023577 CYTH domain APQ13_RS06915 30c9fa50af4ad0ba29eb65d88905e076 81 SUPERFAMILY SSF89447 1 64 8.02E-16 T 25-04-2016 APQ13_RS06915 30c9fa50af4ad0ba29eb65d88905e076 81 PANTHER PTHR40516 2 81 5.4E-12 T 25-04-2016 APQ13_RS06915 30c9fa50af4ad0ba29eb65d88905e076 81 SMART SM00966 6 51 1.2E-7 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APQ13_RS06915 30c9fa50af4ad0ba29eb65d88905e076 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 4.1E-10 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APQ13_RS06915 30c9fa50af4ad0ba29eb65d88905e076 81 Gene3D G3DSA:2.10.260.10 1 81 1.6E-23 T 25-04-2016 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 PANTHER PTHR10359:SF1 13 365 1.2E-92 T 25-04-2016 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 Gene3D G3DSA:3.90.79.10 243 379 2.3E-26 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 Gene3D G3DSA:1.10.1670.10 136 237 4.0E-33 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 20 281 2.6E-96 T 25-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 PANTHER PTHR10359 13 365 1.2E-92 T 25-04-2016 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 Pfam PF00633 Helix-hairpin-helix motif 113 141 9.3E-8 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 Gene3D G3DSA:1.10.340.30 34 135 5.1E-44 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 SUPERFAMILY SSF55811 233 379 2.88E-21 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 SUPERFAMILY SSF48150 17 235 9.58E-70 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 SMART SM00478 52 203 8.5E-46 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 Pfam PF14815 NUDIX domain 248 375 3.4E-16 T 25-04-2016 IPR029119 MutY, C-terminal APQ13_RS09100 c2b431ca4a83b0bd37d9573e77c8ba27 381 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 172 2.6E-18 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 SUPERFAMILY SSF158504 7 89 9.94E-33 T 25-04-2016 IPR023324 BH2638-like domain APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 Gene3D G3DSA:1.10.220.80 14 91 6.4E-32 T 25-04-2016 IPR023324 BH2638-like domain APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 Hamap MF_01041 UPF0223 protein . 3 90 24.86 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 PANTHER PTHR41305 4 92 2.2E-30 T 25-04-2016 APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 4 90 2.0E-43 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 Pfam PF05256 Uncharacterised protein family (UPF0223) 4 88 4.2E-35 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 APQ13_RS02610 4bea85b56c7770c94bfdbb29146605c9 92 PIRSF PIRSF037260 1 92 8.2E-40 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 APQ13_RS07325 85cf298adc4cddaac26192f62912cc9c 229 PANTHER PTHR34070:SF1 14 229 2.5E-60 T 25-04-2016 APQ13_RS07325 85cf298adc4cddaac26192f62912cc9c 229 SUPERFAMILY SSF48371 20 228 7.48E-54 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 APQ13_RS07325 85cf298adc4cddaac26192f62912cc9c 229 Gene3D G3DSA:1.25.40.290 136 228 6.6E-40 T 25-04-2016 APQ13_RS07325 85cf298adc4cddaac26192f62912cc9c 229 Pfam PF08713 DNA alkylation repair enzyme 17 228 1.2E-69 T 25-04-2016 IPR014825 DNA alkylation repair enzyme APQ13_RS07325 85cf298adc4cddaac26192f62912cc9c 229 PANTHER PTHR34070 14 229 2.5E-60 T 25-04-2016 APQ13_RS01080 82564f6798caf91d702b4b57e40a579a 381 Gene3D G3DSA:3.20.20.210 6 381 1.4E-82 T 25-04-2016 APQ13_RS01080 82564f6798caf91d702b4b57e40a579a 381 PANTHER PTHR30519 9 381 2.5E-62 T 25-04-2016 APQ13_RS01080 82564f6798caf91d702b4b57e40a579a 381 PANTHER PTHR30519:SF3 9 381 2.5E-62 T 25-04-2016 APQ13_RS01080 82564f6798caf91d702b4b57e40a579a 381 SUPERFAMILY SSF51726 8 381 4.45E-55 T 25-04-2016 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 PIRSF PIRSF001359 1 285 8.6E-81 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 278 1.1E-72 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 Gene3D G3DSA:3.20.20.70 2 277 1.7E-88 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 130 141 - T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 SUPERFAMILY SSF51569 4 278 5.31E-81 T 25-04-2016 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 PANTHER PTHR30304 6 235 1.7E-67 T 25-04-2016 APQ13_RS05410 d515bc88788ff47ff892b8db0664e1f0 287 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 278 6.3E-85 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 Gene3D G3DSA:3.40.50.1860 2 172 5.5E-57 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 SUPERFAMILY SSF53681 5 106 1.18E-34 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 SUPERFAMILY SSF53681 110 262 1.11E-40 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 PANTHER PTHR21198:SF2 1 264 7.4E-112 T 25-04-2016 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 25-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 253 1.2E-78 T 25-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 PANTHER PTHR21198 1 264 7.4E-112 T 25-04-2016 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 Hamap MF_00258 Glutamate racemase [murI]. 4 256 39.989 T 25-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00050 974854055b6533db2e3de1ce33e341a5 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 213 5.7E-35 T 25-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 PANTHER PTHR10578 226 327 2.2E-102 T 25-04-2016 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 PANTHER PTHR10578 14 210 2.2E-102 T 25-04-2016 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 1 323 33.521 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 PANTHER PTHR10578:SF3 226 327 2.2E-102 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 PANTHER PTHR10578:SF3 14 210 2.2E-102 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 Pfam PF01070 FMN-dependent dehydrogenase 19 92 7.8E-6 T 25-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 Pfam PF01070 FMN-dependent dehydrogenase 159 315 1.1E-20 T 25-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 PIRSF PIRSF003314 1 331 4.1E-107 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 3 322 2.3E-110 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 SUPERFAMILY SSF51395 19 326 2.24E-74 T 25-04-2016 APQ13_RS03500 b7ef25d0d2fcc2b6f8b0ce5a10dfeace 331 Gene3D G3DSA:3.20.20.70 19 320 7.2E-112 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 Gene3D G3DSA:1.10.150.240 18 82 1.6E-31 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 8.2E-31 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 PANTHER PTHR18901 4 212 8.6E-37 T 25-04-2016 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 183 1.4E-13 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 Gene3D G3DSA:3.40.50.1000 2 17 1.5E-37 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 Gene3D G3DSA:3.40.50.1000 90 212 1.5E-37 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 3.4E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.4E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 3.4E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.4E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS09615 f8aee98ef7032242caa1bb432e8704d9 214 SUPERFAMILY SSF56784 2 213 1.06E-44 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01260 818aa758b7f3d9fa3200a3329e980060 289 PANTHER PTHR32196:SF27 2 280 1.5E-75 T 25-04-2016 APQ13_RS01260 818aa758b7f3d9fa3200a3329e980060 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 270 2.0E-26 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APQ13_RS01260 818aa758b7f3d9fa3200a3329e980060 289 PANTHER PTHR32196 2 280 1.5E-75 T 25-04-2016 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Gene3D G3DSA:3.40.1030.10 73 149 7.7E-82 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Gene3D G3DSA:3.40.1030.10 184 333 7.7E-82 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 35.738 T 25-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 331 8.5E-110 T 25-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 PANTHER PTHR11922 73 331 1.4E-106 T 25-04-2016 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 PANTHER PTHR11922:SF5 73 331 1.4E-106 T 25-04-2016 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 60 3.1E-19 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 1.9E-88 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 SUPERFAMILY SSF47648 1 67 4.45E-18 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 SUPERFAMILY SSF52418 73 331 3.01E-83 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Gene3D G3DSA:1.20.970.10 150 183 1.2E-36 T 25-04-2016 APQ13_RS05290 ca2662a7e575a10dc9f5b7470a28e062 335 Gene3D G3DSA:1.20.970.10 1 63 1.2E-36 T 25-04-2016 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 9.2E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 9.2E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 PANTHER PTHR30055 27 133 1.9E-22 T 25-04-2016 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 1.9E-17 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 25-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 SUPERFAMILY SSF46689 24 93 1.85E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 PANTHER PTHR30055:SF2 27 133 1.9E-22 T 25-04-2016 APQ13_RS06700 2b6cac85783fb91fab91e34a128206bd 213 Gene3D G3DSA:1.10.357.10 24 187 2.2E-26 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Gene3D G3DSA:3.30.390.30 444 575 1.9E-46 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Gene3D G3DSA:2.40.50.100 1 93 1.7E-28 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 SUPERFAMILY SSF55424 456 576 1.89E-40 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Gene3D G3DSA:3.50.50.60 123 256 2.2E-37 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 124 575 1.3E-158 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Gene3D G3DSA:3.50.50.60 257 443 5.8E-51 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Pfam PF00364 Biotin-requiring enzyme 4 76 2.1E-18 T 25-04-2016 IPR000089 Biotin/lipoyl attachment APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 SUPERFAMILY SSF51905 122 175 1.3E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 SUPERFAMILY SSF51905 222 309 1.3E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 SUPERFAMILY SSF51905 338 477 1.3E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 457 565 1.0E-36 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 424 6.3E-36 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 392 6.3E-36 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 146 6.3E-36 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 271 6.3E-36 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 310 6.3E-36 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 SUPERFAMILY SSF51230 1 93 6.02E-25 T 25-04-2016 IPR011053 Single hybrid motif APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 159 169 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 437 2.6E-67 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PANTHER PTHR22912 122 569 1.4E-176 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PANTHER PTHR22912:SF125 122 569 1.4E-176 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 540 560 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 391 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 292 317 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 453 474 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 518 533 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 126 148 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 173 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 424 3.5E-63 T 25-04-2016 APQ13_RS07080 c5dc1ece52e7d053c3e52c3d9937c6db 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 265 3.5E-63 T 25-04-2016 APQ13_RS08585 a4c7089fb9e19d49659cda0344c4c88f 236 Gene3D G3DSA:3.40.50.300 4 212 7.0E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08585 a4c7089fb9e19d49659cda0344c4c88f 236 SMART SM00382 28 216 1.4E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08585 a4c7089fb9e19d49659cda0344c4c88f 236 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08585 a4c7089fb9e19d49659cda0344c4c88f 236 SUPERFAMILY SSF52540 3 215 9.61E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08585 a4c7089fb9e19d49659cda0344c4c88f 236 PANTHER PTHR24220 5 207 2.3E-57 T 25-04-2016 APQ13_RS08585 a4c7089fb9e19d49659cda0344c4c88f 236 Pfam PF00005 ABC transporter 19 165 2.4E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1173 22.876 T 25-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 Gene3D G3DSA:3.40.50.300 1 184 1.5E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 Gene3D G3DSA:3.40.50.300 346 355 1.5E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 Gene3D G3DSA:3.40.50.300 1064 1174 1.5E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 SUPERFAMILY SSF52540 823 902 2.2E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 SUPERFAMILY SSF52540 981 1173 2.2E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1171 0.0 T 25-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 PIRSF PIRSF005719 1 1177 1.8E-284 T 25-04-2016 IPR024704 Structural maintenance of chromosomes protein APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 PANTHER PTHR18937 1 485 0.0 T 25-04-2016 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 PANTHER PTHR18937 509 1177 0.0 T 25-04-2016 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 SUPERFAMILY SSF52540 1 216 8.71E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 SUPERFAMILY SSF52540 1070 1156 8.71E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 SUPERFAMILY SSF75553 480 684 4.45E-51 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 Pfam PF06470 SMC proteins Flexible Hinge Domain 518 636 3.5E-26 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 PANTHER PTHR18937:SF251 1 485 0.0 T 25-04-2016 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 PANTHER PTHR18937:SF251 509 1177 0.0 T 25-04-2016 APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1164 4.6E-63 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APQ13_RS00990 1b45cd74c0e7c1fc3b866a0707547284 1178 SMART SM00968 518 637 6.4E-38 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 SMART SM00641 773 885 1.1E-7 T 25-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Gene3D G3DSA:3.20.20.80 772 972 1.1E-49 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 PANTHER PTHR34135:SF2 776 944 2.8E-19 T 25-04-2016 APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 SUPERFAMILY SSF51445 772 974 7.72E-37 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 777 813 - T 25-04-2016 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF01183 Glycosyl hydrolases family 25 776 960 1.4E-44 T 25-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 PANTHER PTHR34135 776 944 2.8E-19 T 25-04-2016 APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF08481 GBS Bsp-like repeat 672 757 1.0E-22 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF08481 GBS Bsp-like repeat 276 359 8.7E-26 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF08481 GBS Bsp-like repeat 569 656 5.0E-27 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF08481 GBS Bsp-like repeat 378 462 2.3E-24 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF08481 GBS Bsp-like repeat 498 559 2.2E-13 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04600 43cac5473ba0dc7f156e55ecdbbc9ef9 979 Pfam PF08481 GBS Bsp-like repeat 205 265 4.1E-14 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 PANTHER PTHR11136 1 423 1.9E-123 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 SUPERFAMILY SSF53623 1 292 3.11E-85 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 SUPERFAMILY SSF53244 294 413 1.59E-21 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 413 1.6E-118 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 PANTHER PTHR11136:SF0 1 423 1.9E-123 T 25-04-2016 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 Gene3D G3DSA:3.40.1190.10 1 288 1.7E-83 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 Pfam PF08245 Mur ligase middle domain 44 267 8.2E-8 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 Gene3D G3DSA:3.90.190.20 294 416 4.1E-23 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS03380 69df5f3fea17fde49c5d8fb0e9430902 425 PIRSF PIRSF001563 1 418 4.4E-124 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APQ13_RS06135 7497514c7e5c864d325c895fe06e80b3 424 SUPERFAMILY SSF58113 58 161 1.14E-6 T 25-04-2016 APQ13_RS06135 7497514c7e5c864d325c895fe06e80b3 424 Gene3D G3DSA:1.20.120.20 38 151 4.6E-5 T 25-04-2016 APQ13_RS06135 7497514c7e5c864d325c895fe06e80b3 424 Pfam PF02646 RmuC family 117 408 9.9E-73 T 25-04-2016 IPR003798 DNA recombination RmuC APQ13_RS06135 7497514c7e5c864d325c895fe06e80b3 424 PANTHER PTHR30563 40 423 7.8E-93 T 25-04-2016 APQ13_RS09640 45f95f2495de7ac5ecde5ad0f9580881 321 PANTHER PTHR32332 1 321 6.8E-127 T 25-04-2016 APQ13_RS09640 45f95f2495de7ac5ecde5ad0f9580881 321 Gene3D G3DSA:3.20.20.70 1 298 1.0E-73 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS09640 45f95f2495de7ac5ecde5ad0f9580881 321 SUPERFAMILY SSF51412 1 309 2.29E-73 T 25-04-2016 APQ13_RS09640 45f95f2495de7ac5ecde5ad0f9580881 321 Pfam PF03060 Nitronate monooxygenase 3 302 1.0E-72 T 25-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APQ13_RS09640 45f95f2495de7ac5ecde5ad0f9580881 321 PANTHER PTHR32332:SF20 1 321 6.8E-127 T 25-04-2016 APQ13_RS09640 45f95f2495de7ac5ecde5ad0f9580881 321 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 2 310 1.2E-152 T 25-04-2016 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative APQ13_RS08745 fddbfb2b66dd20612d56f1c3742b7cf4 164 Gene3D G3DSA:3.40.35.10 1 163 2.3E-42 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APQ13_RS08745 fddbfb2b66dd20612d56f1c3742b7cf4 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 5.1E-37 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APQ13_RS08745 fddbfb2b66dd20612d56f1c3742b7cf4 164 SUPERFAMILY SSF52728 1 163 1.96E-40 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APQ13_RS08745 fddbfb2b66dd20612d56f1c3742b7cf4 164 PANTHER PTHR33799 1 149 2.8E-16 T 25-04-2016 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 Pfam PF01632 Ribosomal protein L35 2 62 4.3E-21 T 25-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.2E-21 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 25-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 8.6E-17 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 8.6E-17 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 8.6E-17 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 SUPERFAMILY SSF143034 2 62 3.4E-19 T 25-04-2016 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.787 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APQ13_RS04560 f16a7823e5ca1526864aa29c832963c4 66 PANTHER PTHR33343 1 66 2.1E-22 T 25-04-2016 APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 Pfam PF02629 CoA binding domain 83 182 7.9E-28 T 25-04-2016 IPR003781 CoA-binding GO:0048037 APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 SUPERFAMILY SSF51735 84 210 1.63E-25 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 Gene3D G3DSA:1.10.10.10 6 76 7.0E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 Gene3D G3DSA:3.40.50.720 78 211 2.8E-48 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 SUPERFAMILY SSF46785 8 79 4.49E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 SMART SM00881 80 183 4.2E-17 T 25-04-2016 IPR003781 CoA-binding GO:0048037 APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 PANTHER PTHR35786 7 212 2.9E-97 T 25-04-2016 APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 212 38.684 T 25-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 Pfam PF06971 Putative DNA-binding protein N-terminus 7 54 2.3E-18 T 25-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 APQ13_RS03020 2b518fe11a5e1f933be20ca53fbbe7c7 213 PANTHER PTHR35786:SF1 7 212 2.9E-97 T 25-04-2016 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 2.3E-37 T 25-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 SUPERFAMILY SSF55620 2 119 1.28E-37 T 25-04-2016 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 PANTHER PTHR20941 1 120 3.3E-30 T 25-04-2016 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 8.6E-29 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 SMART SM00905 4 117 3.8E-47 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 Pfam PF02152 Dihydroneopterin aldolase 4 115 3.5E-30 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APQ13_RS03365 8547a9ca4c1435c9036563235340d747 120 Gene3D G3DSA:3.30.1130.10 1 119 1.3E-39 T 25-04-2016 APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 276 1.7E-90 T 25-04-2016 IPR003797 DegV APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 SUPERFAMILY SSF82549 1 278 3.92E-83 T 25-04-2016 APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 Gene3D G3DSA:3.40.50.10170 3 151 9.4E-46 T 25-04-2016 APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 Gene3D G3DSA:3.30.1180.10 155 278 1.5E-40 T 25-04-2016 APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 277 2.1E-89 T 25-04-2016 IPR003797 DegV APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 PANTHER PTHR33434:SF1 1 276 1.5E-120 T 25-04-2016 APQ13_RS05060 59f1ab5ab34aeb27b70bf46472e3a4aa 279 PANTHER PTHR33434 1 276 1.5E-120 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 SUPERFAMILY SSF56519 60 124 1.09E-25 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 SUPERFAMILY SSF56519 191 321 1.09E-25 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 305 3.5E-29 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 Gene3D G3DSA:3.40.710.10 321 687 2.4E-73 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 PANTHER PTHR30627 174 463 2.7E-150 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 PANTHER PTHR30627 482 691 2.7E-150 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 PANTHER PTHR30627 7 116 2.7E-150 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 PANTHER PTHR30627:SF2 174 463 2.7E-150 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 PANTHER PTHR30627:SF2 482 691 2.7E-150 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 PANTHER PTHR30627:SF2 7 116 2.7E-150 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 Gene3D G3DSA:3.90.1310.10 205 320 1.1E-24 T 25-04-2016 APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 SUPERFAMILY SSF56601 322 689 8.16E-65 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS05010 7c7bfbc6c56bf840448908d7320a982e 691 Pfam PF00905 Penicillin binding protein transpeptidase domain 354 681 4.1E-72 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 SUPERFAMILY SSF57863 80 232 4.97E-36 T 25-04-2016 APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 Pfam PF11967 Recombination protein O N terminal 1 77 4.2E-18 T 25-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 Gene3D G3DSA:2.40.50.140 1 81 3.1E-7 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 243 9.9E-73 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 Hamap MF_00201 DNA repair protein RecO [recO]. 2 243 24.18 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 Pfam PF02565 Recombination protein O C terminal 84 237 1.5E-33 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 SUPERFAMILY SSF50249 1 77 1.71E-12 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07460 eb28819002eb4789d46810857ff050e5 251 PANTHER PTHR33991 2 250 2.7E-49 T 25-04-2016 APQ13_RS02805 d109738667c45992675804958ce9406a 320 Pfam PF13602 Zinc-binding dehydrogenase 189 315 4.7E-14 T 25-04-2016 APQ13_RS02805 d109738667c45992675804958ce9406a 320 Gene3D G3DSA:3.90.180.10 1 147 8.6E-32 T 25-04-2016 IPR011032 GroES-like APQ13_RS02805 d109738667c45992675804958ce9406a 320 SUPERFAMILY SSF50129 1 148 1.05E-29 T 25-04-2016 IPR011032 GroES-like APQ13_RS02805 d109738667c45992675804958ce9406a 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 5.1E-6 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APQ13_RS02805 d109738667c45992675804958ce9406a 320 PANTHER PTHR11695 15 315 2.3E-50 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APQ13_RS02805 d109738667c45992675804958ce9406a 320 Gene3D G3DSA:3.40.50.720 148 259 1.7E-10 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02805 d109738667c45992675804958ce9406a 320 SUPERFAMILY SSF51735 116 283 4.65E-22 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02805 d109738667c45992675804958ce9406a 320 SMART SM00829 10 315 1.7E-5 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APQ13_RS03960 fbfaf8b428597788bef107666fd42eb0 312 SUPERFAMILY SSF53448 3 249 3.42E-33 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS03960 fbfaf8b428597788bef107666fd42eb0 312 PANTHER PTHR10859 3 297 3.0E-71 T 25-04-2016 APQ13_RS03960 fbfaf8b428597788bef107666fd42eb0 312 Gene3D G3DSA:3.90.550.10 2 117 1.4E-14 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS03960 fbfaf8b428597788bef107666fd42eb0 312 Pfam PF00535 Glycosyl transferase family 2 7 159 1.6E-17 T 25-04-2016 IPR001173 Glycosyltransferase 2-like APQ13_RS03960 fbfaf8b428597788bef107666fd42eb0 312 PANTHER PTHR10859:SF95 3 297 3.0E-71 T 25-04-2016 APQ13_RS04785 ad0dfca3cdd5fa1f32e95f38927ffb04 166 PANTHER PTHR31087 1 157 1.6E-36 T 25-04-2016 APQ13_RS04785 ad0dfca3cdd5fa1f32e95f38927ffb04 166 Pfam PF04525 LURP-one-related 3 147 6.8E-14 T 25-04-2016 IPR007612 LURP1-related protein domain APQ13_RS04785 ad0dfca3cdd5fa1f32e95f38927ffb04 166 PANTHER PTHR31087:SF9 1 157 1.6E-36 T 25-04-2016 APQ13_RS04785 ad0dfca3cdd5fa1f32e95f38927ffb04 166 SUPERFAMILY SSF54518 2 153 2.22E-38 T 25-04-2016 IPR025659 Tubby C-terminal-like domain APQ13_RS00780 9a10acf15d7d40b227da19559c10a2a0 184 Pfam PF13302 Acetyltransferase (GNAT) domain 17 153 9.3E-25 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS00780 9a10acf15d7d40b227da19559c10a2a0 184 PANTHER PTHR13256:SF31 1 180 1.4E-69 T 25-04-2016 APQ13_RS00780 9a10acf15d7d40b227da19559c10a2a0 184 Gene3D G3DSA:3.40.630.30 12 178 3.3E-39 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS00780 9a10acf15d7d40b227da19559c10a2a0 184 PANTHER PTHR13256 1 180 1.4E-69 T 25-04-2016 APQ13_RS00780 9a10acf15d7d40b227da19559c10a2a0 184 SUPERFAMILY SSF55729 12 176 1.01E-35 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS08845 202afdfea876656e9e74c73f5e964413 258 Pfam PF00795 Carbon-nitrogen hydrolase 3 244 1.9E-43 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APQ13_RS08845 202afdfea876656e9e74c73f5e964413 258 PANTHER PTHR23088 1 258 2.9E-73 T 25-04-2016 APQ13_RS08845 202afdfea876656e9e74c73f5e964413 258 SUPERFAMILY SSF56317 1 258 2.49E-67 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APQ13_RS08845 202afdfea876656e9e74c73f5e964413 258 Gene3D G3DSA:3.60.110.10 1 258 2.3E-72 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 PANTHER PTHR11496:SF79 372 889 3.3E-208 T 25-04-2016 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 Gene3D G3DSA:3.40.605.10 11 243 1.4E-32 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 Gene3D G3DSA:1.20.1090.10 667 886 2.1E-60 T 25-04-2016 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 Gene3D G3DSA:3.40.50.1970 468 666 9.1E-55 T 25-04-2016 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 Pfam PF00465 Iron-containing alcohol dehydrogenase 468 881 1.3E-111 T 25-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 SUPERFAMILY SSF53720 19 462 2.52E-65 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 656 684 - T 25-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 Gene3D G3DSA:3.40.309.10 244 412 3.7E-9 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 PIRSF PIRSF000111 2 889 0.0 T 25-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 SUPERFAMILY SSF56796 461 887 1.09E-99 T 25-04-2016 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 Pfam PF00171 Aldehyde dehydrogenase family 5 281 2.6E-18 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS07005 ea5ef3307196c750b2c552ee035b29e9 889 PANTHER PTHR11496 372 889 3.3E-208 T 25-04-2016 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 Gene3D G3DSA:3.40.190.10 172 261 3.3E-17 T 25-04-2016 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 8.0E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.7E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.7E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.7E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 PANTHER PTHR30126 1 288 2.3E-62 T 25-04-2016 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 SUPERFAMILY SSF53850 88 290 1.93E-34 T 25-04-2016 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 Pfam PF03466 LysR substrate binding domain 88 289 2.4E-36 T 25-04-2016 IPR005119 LysR, substrate-binding APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 Gene3D G3DSA:3.40.190.10 88 171 9.7E-11 T 25-04-2016 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 SUPERFAMILY SSF46785 6 107 1.33E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 PANTHER PTHR30126:SF11 1 288 2.3E-62 T 25-04-2016 APQ13_RS08140 d016c405bdad09d987566f35bee6be02 291 Gene3D G3DSA:1.10.10.10 6 84 9.2E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08945 e52dfee29b6e63159fac9c0530e0abf7 441 PANTHER PTHR40448:SF1 2 441 1.6E-63 T 25-04-2016 APQ13_RS08945 e52dfee29b6e63159fac9c0530e0abf7 441 SUPERFAMILY SSF55874 304 423 2.22E-10 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS08945 e52dfee29b6e63159fac9c0530e0abf7 441 Pfam PF14501 GHKL domain 337 440 1.1E-17 T 25-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain APQ13_RS08945 e52dfee29b6e63159fac9c0530e0abf7 441 Gene3D G3DSA:3.30.565.10 304 420 2.1E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS08945 e52dfee29b6e63159fac9c0530e0abf7 441 PANTHER PTHR40448 2 441 1.6E-63 T 25-04-2016 APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 SUPERFAMILY SSF56784 3 269 1.22E-61 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 3.1E-29 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 PANTHER PTHR10000 1 270 4.6E-86 T 25-04-2016 APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 PANTHER PTHR10000:SF23 1 270 4.6E-86 T 25-04-2016 APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 Gene3D G3DSA:3.40.50.1000 2 73 2.9E-52 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 Gene3D G3DSA:3.40.50.1000 171 270 2.9E-52 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 6.9E-49 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS05905 1a14a97d03dfdbbd695cea4c1ab036b2 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 265 3.6E-59 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 PANTHER PTHR24220 7 246 4.0E-127 T 25-04-2016 APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 PIRSF PIRSF039085 2 246 1.8E-107 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 SUPERFAMILY SSF52540 5 240 1.74E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 Pfam PF00005 ABC transporter 21 170 2.4E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 Gene3D G3DSA:3.40.50.300 4 242 4.0E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 PANTHER PTHR24220:SF327 7 246 4.0E-127 T 25-04-2016 APQ13_RS06680 a3d75f073527a7a41c52b9020b9f4c09 246 SMART SM00382 30 218 7.4E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 SUPERFAMILY SSF55681 117 417 4.98E-109 T 25-04-2016 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 3.6E-176 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 Gene3D G3DSA:3.30.930.10 106 420 2.2E-144 T 25-04-2016 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PIRSF PIRSF001529 1 424 2.5E-184 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 42.777 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 Gene3D G3DSA:1.10.287.40 1 105 1.2E-22 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PANTHER PTHR11778 1 424 3.4E-215 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.3E-31 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.7E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.7E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.7E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.7E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.7E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 399 1.0E-35 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09015 3f0b0096c450b916d87a6ad8a095baaf 424 SUPERFAMILY SSF46589 1 113 2.2E-29 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APQ13_RS05550 39d7e139f0d0723935471672e1e5c3de 334 SUPERFAMILY SSF55874 206 326 5.11E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS05550 39d7e139f0d0723935471672e1e5c3de 334 Gene3D G3DSA:3.30.565.10 209 329 2.2E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS05550 39d7e139f0d0723935471672e1e5c3de 334 PANTHER PTHR24421:SF1 1 334 2.3E-50 T 25-04-2016 APQ13_RS05550 39d7e139f0d0723935471672e1e5c3de 334 PANTHER PTHR24421 1 334 2.3E-50 T 25-04-2016 APQ13_RS05550 39d7e139f0d0723935471672e1e5c3de 334 PIRSF PIRSF037431 1 334 2.9E-126 T 25-04-2016 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 APQ13_RS05550 39d7e139f0d0723935471672e1e5c3de 334 Pfam PF07730 Histidine kinase 132 200 1.8E-17 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 SMART SM00382 26 216 1.8E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 PANTHER PTHR24220 3 250 3.3E-127 T 25-04-2016 APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 PANTHER PTHR24220:SF550 3 250 3.3E-127 T 25-04-2016 APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 Pfam PF00005 ABC transporter 17 168 6.7E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 Gene3D G3DSA:3.40.50.300 1 239 5.5E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 PIRSF PIRSF039085 1 244 4.9E-104 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APQ13_RS03515 090385181181cde6b43dbc4d5ae2e98b 254 SUPERFAMILY SSF52540 1 238 7.34E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 SUPERFAMILY SSF51621 2 234 2.39E-64 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 5.6E-80 T 25-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 Gene3D G3DSA:3.20.20.60 2 235 2.8E-73 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 PIRSF PIRSF015582 1 294 4.8E-82 T 25-04-2016 IPR011206 Citrate lyase beta subunit-like APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 PANTHER PTHR32308 1 289 9.5E-102 T 25-04-2016 IPR011206 Citrate lyase beta subunit-like APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 289 2.4E-138 T 25-04-2016 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 APQ13_RS03130 ebf60adbc11d55bfe888ca709482e420 300 PANTHER PTHR32308:SF0 1 289 9.5E-102 T 25-04-2016 APQ13_RS08880 e6466bdf3ad6550518e48c866aa13cc9 299 PANTHER PTHR10120:SF19 13 298 7.7E-91 T 25-04-2016 APQ13_RS08880 e6466bdf3ad6550518e48c866aa13cc9 299 PANTHER PTHR10120 13 298 7.7E-91 T 25-04-2016 APQ13_RS08880 e6466bdf3ad6550518e48c866aa13cc9 299 Hamap MF_00188 Protease HtpX [htpX]. 10 299 27.173 T 25-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 APQ13_RS08880 e6466bdf3ad6550518e48c866aa13cc9 299 Gene3D G3DSA:3.30.2010.10 70 159 1.3E-31 T 25-04-2016 APQ13_RS08880 e6466bdf3ad6550518e48c866aa13cc9 299 Pfam PF01435 Peptidase family M48 84 298 5.1E-36 T 25-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 PIRSF PIRSF000485 8 474 2.2E-174 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 Gene3D G3DSA:3.60.20.10 12 255 3.5E-64 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 PANTHER PTHR11907:SF0 9 471 1.0E-229 T 25-04-2016 APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 Gene3D G3DSA:3.40.50.2020 270 435 7.3E-44 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 Pfam PF00156 Phosphoribosyl transferase domain 272 384 3.7E-10 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 5.6E-155 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 SUPERFAMILY SSF56235 12 239 7.03E-66 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 Pfam PF13537 Glutamine amidotransferase domain 93 210 3.4E-18 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 459 45.778 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 SUPERFAMILY SSF53271 248 465 4.85E-74 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS07425 b7d8fcfa62471a0f9bd82fb1aa6f39f9 479 PANTHER PTHR11907 9 471 1.0E-229 T 25-04-2016 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 122 134 3.2E-6 T 25-04-2016 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 136 160 3.2E-6 T 25-04-2016 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 61 75 3.2E-6 T 25-04-2016 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 Gene3D G3DSA:3.40.50.150 10 192 2.2E-35 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 PANTHER PTHR18895 1 194 4.3E-82 T 25-04-2016 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 Pfam PF05175 Methyltransferase small domain 29 192 3.7E-50 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 PANTHER PTHR18895:SF72 1 194 4.3E-82 T 25-04-2016 APQ13_RS02685 659d0ef0c70c2fe12eefbf2dd0166079 198 SUPERFAMILY SSF53335 7 195 1.82E-40 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05630 26570490797de02375a4876aaa40945a 197 SUPERFAMILY SSF52980 29 193 1.66E-64 T 25-04-2016 IPR011335 Restriction endonuclease type II-like APQ13_RS05630 26570490797de02375a4876aaa40945a 197 Gene3D G3DSA:3.40.1350.10 28 193 4.0E-73 T 25-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APQ13_RS05630 26570490797de02375a4876aaa40945a 197 PIRSF PIRSF037785 18 197 2.7E-79 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 APQ13_RS05630 26570490797de02375a4876aaa40945a 197 PANTHER PTHR41275 1 197 1.7E-90 T 25-04-2016 APQ13_RS05630 26570490797de02375a4876aaa40945a 197 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 197 96.459 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 APQ13_RS05630 26570490797de02375a4876aaa40945a 197 Pfam PF03838 Recombination protein U 27 190 4.1E-64 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 APQ13_RS05630 26570490797de02375a4876aaa40945a 197 TIGRFAM TIGR00648 recU: recombination protein U 26 191 3.8E-62 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 PANTHER PTHR30204 5 111 8.3E-36 T 25-04-2016 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 Pfam PF13411 MerR HTH family regulatory protein 14 76 1.2E-18 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 SMART SM00422 13 81 1.8E-20 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 PANTHER PTHR30204:SF8 5 111 8.3E-36 T 25-04-2016 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 Gene3D G3DSA:1.10.1660.10 14 101 1.2E-21 T 25-04-2016 APQ13_RS06090 92df95bac94bb0312aacaa3777936387 123 SUPERFAMILY SSF46955 13 94 2.29E-19 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 ProSitePatterns PS00605 ATP synthase c subunit signature. 32 53 - T 25-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 Hamap MF_01396 ATP synthase subunit c [atpH]. 1 66 10.996 T 25-04-2016 APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 Pfam PF00137 ATP synthase subunit C 7 60 4.0E-8 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 SUPERFAMILY SSF81333 7 64 1.12E-12 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 Gene3D G3DSA:1.20.20.10 7 64 2.0E-17 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 PRINTS PR00124 ATP synthase C subunit signature 42 67 2.4E-6 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 PRINTS PR00124 ATP synthase C subunit signature 4 23 2.4E-6 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APQ13_RS00890 7233da59336e5636a61f4f75e30807ea 67 PRINTS PR00124 ATP synthase C subunit signature 25 40 2.4E-6 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 SUPERFAMILY SSF52374 24 210 3.03E-51 T 25-04-2016 APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 Pfam PF01467 Cytidylyltransferase-like 28 183 1.7E-33 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 Gene3D G3DSA:3.40.50.620 22 210 5.9E-63 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 PANTHER PTHR12039 3 210 6.7E-55 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 89 1.0E-8 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 24 210 29.971 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APQ13_RS09345 00da0d623c60645f57c155b7a28f32a2 210 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 28 209 3.4E-51 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APQ13_RS05890 41d7c42ea40a7b2307566f357f948ffe 147 Gene3D G3DSA:3.40.50.300 2 144 3.9E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05890 41d7c42ea40a7b2307566f357f948ffe 147 PANTHER PTHR33540 1 144 6.9E-43 T 25-04-2016 APQ13_RS05890 41d7c42ea40a7b2307566f357f948ffe 147 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 127 1.5E-33 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APQ13_RS05890 41d7c42ea40a7b2307566f357f948ffe 147 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 130 4.5E-37 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APQ13_RS05890 41d7c42ea40a7b2307566f357f948ffe 147 SUPERFAMILY SSF52540 17 117 5.27E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01700 dcfce6edb280079e1ba4ece737901897 249 SUPERFAMILY SSF53474 6 248 8.88E-22 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01700 dcfce6edb280079e1ba4ece737901897 249 Gene3D G3DSA:3.40.50.1820 6 247 3.9E-24 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01700 dcfce6edb280079e1ba4ece737901897 249 PANTHER PTHR10992 4 249 2.5E-13 T 25-04-2016 APQ13_RS06330 8313a7ae6869b34411ccfaf0ea14fcdb 336 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 336 2.0E-152 T 25-04-2016 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 APQ13_RS06330 8313a7ae6869b34411ccfaf0ea14fcdb 336 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 243 335 2.1E-43 T 25-04-2016 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 APQ13_RS06330 8313a7ae6869b34411ccfaf0ea14fcdb 336 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 6 188 2.5E-77 T 25-04-2016 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 APQ13_RS06330 8313a7ae6869b34411ccfaf0ea14fcdb 336 PANTHER PTHR39427 1 336 3.7E-104 T 25-04-2016 APQ13_RS03140 11512cbbdb8585c6770fc0a5c7c33a85 42 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 39 2.4E-5 T 25-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:1.10.8.280 284 405 6.9E-43 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:1.20.1580.10 694 820 5.0E-56 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 PANTHER PTHR32282 1 943 0.0 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 PANTHER PTHR32282:SF2 1 943 0.0 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Pfam PF00005 ABC transporter 624 860 2.9E-11 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SUPERFAMILY SSF52540 616 913 5.74E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SMART SM00382 24 260 19.0 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SMART SM00382 633 908 5.0E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:3.30.1490.20 132 154 2.5E-29 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:3.30.1490.20 201 248 2.5E-29 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.794 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SUPERFAMILY SSF52540 10 205 1.42E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SUPERFAMILY SSF52540 432 571 1.42E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SUPERFAMILY SSF52540 10 42 1.46E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 SUPERFAMILY SSF52540 196 342 1.46E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:1.20.1580.10 92 130 3.6E-50 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:1.20.1580.10 406 479 3.6E-50 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:1.20.1580.10 249 282 3.6E-50 T 25-04-2016 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:3.40.50.300 821 941 9.6E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:3.40.50.300 612 669 9.6E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:3.40.50.300 6 90 3.6E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09160 b2893305af8aecc7e3f1f2d923c8525d 943 Gene3D G3DSA:3.40.50.300 480 600 3.6E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04010 1e536a3cded473a4be8dfa310b57ac00 284 SUPERFAMILY SSF51735 2 280 8.7E-84 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04010 1e536a3cded473a4be8dfa310b57ac00 284 PANTHER PTHR10491:SF4 1 280 2.6E-96 T 25-04-2016 APQ13_RS04010 1e536a3cded473a4be8dfa310b57ac00 284 Pfam PF04321 RmlD substrate binding domain 2 280 6.7E-109 T 25-04-2016 IPR029903 RmlD-like substrate binding domain APQ13_RS04010 1e536a3cded473a4be8dfa310b57ac00 284 Gene3D G3DSA:3.40.50.720 2 229 5.6E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04010 1e536a3cded473a4be8dfa310b57ac00 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 279 1.6E-83 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APQ13_RS04010 1e536a3cded473a4be8dfa310b57ac00 284 PANTHER PTHR10491 1 280 2.6E-96 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 424 5.5E-138 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 SUPERFAMILY SSF53383 6 423 3.59E-126 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 PANTHER PTHR11808:SF12 267 426 3.3E-236 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 PANTHER PTHR11808:SF12 1 237 3.3E-236 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 424 2.3E-188 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 PANTHER PTHR11808 267 426 3.3E-236 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 PANTHER PTHR11808 1 237 3.3E-236 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 PIRSF PIRSF001434 1 426 1.1E-127 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 Gene3D G3DSA:3.40.640.10 6 288 1.8E-120 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS02480 5319f996aeaab9cb61062e536e211ba0 426 Gene3D G3DSA:3.90.1150.10 290 426 6.0E-47 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS07725 de109005b0940407631bdd5b1e3bce19 121 PANTHER PTHR32319:SF3 4 89 1.1E-27 T 25-04-2016 APQ13_RS07725 de109005b0940407631bdd5b1e3bce19 121 SUPERFAMILY SSF55174 2 66 6.67E-16 T 25-04-2016 APQ13_RS07725 de109005b0940407631bdd5b1e3bce19 121 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 2 61 1.7E-26 T 25-04-2016 IPR014330 RNA-binding S4-related,YaaA APQ13_RS07725 de109005b0940407631bdd5b1e3bce19 121 PANTHER PTHR32319 4 89 1.1E-27 T 25-04-2016 APQ13_RS07725 de109005b0940407631bdd5b1e3bce19 121 Gene3D G3DSA:3.10.290.10 1 64 4.3E-19 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07725 de109005b0940407631bdd5b1e3bce19 121 Pfam PF13275 S4 domain 4 66 2.1E-21 T 25-04-2016 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 PANTHER PTHR30514 2 218 3.7E-30 T 25-04-2016 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 PANTHER PTHR30514:SF1 2 218 3.7E-30 T 25-04-2016 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 68 2.7E-12 T 25-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 SUPERFAMILY SSF46689 4 68 5.55E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 Gene3D G3DSA:3.40.50.10490 57 209 2.7E-19 T 25-04-2016 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 Gene3D G3DSA:1.10.10.10 4 56 3.6E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 Pfam PF01380 SIS domain 112 212 2.9E-14 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APQ13_RS07160 dd08e12de05f68aecbae8aefe283f767 250 SUPERFAMILY SSF53697 84 246 9.3E-25 T 25-04-2016 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 25-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 155 311 3.2E-24 T 25-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 334 40.273 T 25-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 Gene3D G3DSA:3.30.360.10 155 308 2.9E-55 T 25-04-2016 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 Gene3D G3DSA:3.40.50.720 1 154 2.2E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 SMART SM00859 2 140 3.6E-34 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 PANTHER PTHR32338:SF8 1 337 1.3E-139 T 25-04-2016 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 SUPERFAMILY SSF55347 146 308 7.28E-50 T 25-04-2016 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 338 7.0E-124 T 25-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 PANTHER PTHR32338 1 337 1.3E-139 T 25-04-2016 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 132 5.1E-26 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APQ13_RS04720 7edeaad67ed3ae56575828a03ee6545b 340 SUPERFAMILY SSF51735 2 173 5.31E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08055 108d3996c3d4c8286772158a773d54a7 89 PANTHER PTHR40067 2 88 1.8E-44 T 25-04-2016 APQ13_RS08055 108d3996c3d4c8286772158a773d54a7 89 Hamap MF_01507 UPF0297 protein . 1 84 27.24 T 25-04-2016 IPR009309 Uncharacterised protein family UPF0297 APQ13_RS08055 108d3996c3d4c8286772158a773d54a7 89 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 1.9E-36 T 25-04-2016 IPR009309 Uncharacterised protein family UPF0297 APQ13_RS08055 108d3996c3d4c8286772158a773d54a7 89 PIRSF PIRSF037258 1 87 4.0E-44 T 25-04-2016 IPR009309 Uncharacterised protein family UPF0297 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 Gene3D G3DSA:3.40.50.1100 122 204 1.0E-10 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 Gene3D G3DSA:3.40.50.1100 205 446 1.2E-91 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 SUPERFAMILY SSF53686 3 491 1.02E-146 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 PANTHER PTHR10314:SF1 373 457 3.6E-129 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 PANTHER PTHR10314:SF1 54 342 3.6E-129 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 PANTHER PTHR10314:SF1 27 38 3.6E-129 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 PANTHER PTHR10314 373 457 3.6E-129 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 PANTHER PTHR10314 54 342 3.6E-129 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 PANTHER PTHR10314 27 38 3.6E-129 T 25-04-2016 APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 101 421 3.7E-13 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 Gene3D G3DSA:3.90.1380.10 4 85 5.7E-28 T 25-04-2016 IPR029144 Threonine synthase, N-terminal APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 Pfam PF14821 Threonine synthase N terminus 5 80 4.9E-23 T 25-04-2016 IPR029144 Threonine synthase, N-terminal APQ13_RS07290 e41274d826b2e4971a5e0c029062e75d 494 TIGRFAM TIGR00260 thrC: threonine synthase 84 444 5.9E-70 T 25-04-2016 IPR004450 Threonine synthase-like APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 2.1E-63 T 25-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 SMART SM00981 74 165 1.2E-18 T 25-04-2016 IPR004114 THUMP domain GO:0003723 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 1.1E-117 T 25-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 PANTHER PTHR14911 1 396 1.1E-175 T 25-04-2016 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 SUPERFAMILY SSF52402 174 386 1.96E-50 T 25-04-2016 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 Gene3D G3DSA:3.40.50.620 173 333 1.7E-51 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 405 164.654 T 25-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 PANTHER PTHR14911:SF16 1 396 1.1E-175 T 25-04-2016 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 SUPERFAMILY SSF143437 3 173 1.34E-49 T 25-04-2016 APQ13_RS03920 05b6cc19213daf970556a250b781f45b 405 Pfam PF02926 THUMP domain 44 162 6.7E-16 T 25-04-2016 IPR004114 THUMP domain GO:0003723 APQ13_RS05035 02c3431dac63278486874a1ef9ac55f4 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.1E-14 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS05035 02c3431dac63278486874a1ef9ac55f4 213 SUPERFAMILY SSF46689 1 78 1.23E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS05035 02c3431dac63278486874a1ef9ac55f4 213 PANTHER PTHR30055 1 181 1.1E-19 T 25-04-2016 APQ13_RS05035 02c3431dac63278486874a1ef9ac55f4 213 Gene3D G3DSA:1.10.357.10 3 185 9.3E-25 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS05035 02c3431dac63278486874a1ef9ac55f4 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.7E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS05035 02c3431dac63278486874a1ef9ac55f4 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.7E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 35 391 1.2E-137 T 25-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 SMART SM00382 52 249 7.3E-19 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 PANTHER PTHR24220 40 402 6.5E-152 T 25-04-2016 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 PANTHER PTHR24220 5 15 6.5E-152 T 25-04-2016 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 Pfam PF00005 ABC transporter 45 191 2.6E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 Pfam PF00571 CBS domain 340 389 0.0017 T 25-04-2016 IPR000644 CBS domain APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 PANTHER PTHR24220:SF374 40 402 6.5E-152 T 25-04-2016 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 PANTHER PTHR24220:SF374 5 15 6.5E-152 T 25-04-2016 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 Gene3D G3DSA:3.40.50.300 4 263 1.4E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 SUPERFAMILY SSF54631 273 391 2.0E-14 T 25-04-2016 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 Gene3D G3DSA:3.10.580.10 264 395 1.7E-16 T 25-04-2016 APQ13_RS02980 f75ab99218862c2fd3219c6169df8254 402 SUPERFAMILY SSF52540 42 269 7.98E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 PANTHER PTHR12592 1 277 2.9E-63 T 25-04-2016 APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 213 223 - T 25-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 SUPERFAMILY SSF53613 7 274 1.36E-61 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 9 273 1.8E-53 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 Gene3D G3DSA:3.40.1190.20 7 276 1.2E-73 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 Pfam PF01256 Carbohydrate kinase 27 270 2.5E-63 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 4 277 22.426 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APQ13_RS05115 b4215e07fcd585dfe0b374c566019cec 277 PANTHER PTHR12592:SF0 1 277 2.9E-63 T 25-04-2016 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 Gene3D G3DSA:3.40.50.300 349 579 9.7E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 Pfam PF00664 ABC transporter transmembrane region 21 303 7.1E-53 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 SUPERFAMILY SSF90123 9 330 4.32E-80 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 SMART SM00382 374 546 7.2E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 PANTHER PTHR24221:SF271 1 585 1.1E-277 T 25-04-2016 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 SUPERFAMILY SSF52540 343 585 1.67E-88 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 PANTHER PTHR24221 1 585 1.1E-277 T 25-04-2016 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 Gene3D G3DSA:1.20.1560.10 9 330 1.3E-79 T 25-04-2016 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 Pfam PF00005 ABC transporter 367 514 4.5E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03635 30d4bdf98df6e7e2884b6231fc37a5dc 590 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 Gene3D G3DSA:1.10.287.10 3 89 5.3E-38 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.0E-36 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 Pfam PF00312 Ribosomal protein S15 8 88 9.9E-34 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.792 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 PANTHER PTHR23321 1 89 3.3E-42 T 25-04-2016 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 SUPERFAMILY SSF47060 3 89 3.24E-34 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-40 T 25-04-2016 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07000 f4c327167a43fbfa51b0d9cf7b74d91f 89 SMART SM01387 8 88 3.0E-45 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 Gene3D G3DSA:1.10.10.10 3 64 3.8E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 Gene3D G3DSA:3.40.1410.10 65 231 1.4E-48 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 SMART SM00345 8 67 1.1E-24 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 SUPERFAMILY SSF64288 55 230 4.08E-46 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 PANTHER PTHR11751 116 140 1.2E-29 T 25-04-2016 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 PANTHER PTHR11751 1 69 1.2E-29 T 25-04-2016 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 SUPERFAMILY SSF46785 3 71 2.21E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 Pfam PF07702 UTRA domain 88 226 1.6E-36 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 SMART SM00866 88 226 2.5E-34 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 8.1E-22 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.0E-11 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.0E-11 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 PANTHER PTHR11751:SF333 116 140 1.2E-29 T 25-04-2016 APQ13_RS02970 96f62744cc99819c2a8c2534236aa982 232 PANTHER PTHR11751:SF333 1 69 1.2E-29 T 25-04-2016 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 PANTHER PTHR21403 1 211 7.9E-90 T 25-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 SUPERFAMILY SSF53850 2 200 6.92E-66 T 25-04-2016 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 25-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 185 5.4E-63 T 25-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 Pfam PF01634 ATP phosphoribosyltransferase 54 201 1.0E-49 T 25-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 58.854 T 25-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 Gene3D G3DSA:3.40.190.10 4 143 1.7E-43 T 25-04-2016 APQ13_RS01980 3413eeef60dfa8fc7fb69dce0316ca42 215 PANTHER PTHR21403:SF3 1 211 7.9E-90 T 25-04-2016 APQ13_RS08320 992de8265b31aa6005886ae0ce3bf4b7 298 Pfam PF10899 Putative abortive phage resistance protein AbiGi, antitoxin 47 255 8.5E-22 T 25-04-2016 IPR021223 Abortive phage resistance protein AbiGi APQ13_RS04390 a4f278000dfe974ac90aa51c660155fe 518 Gene3D G3DSA:2.160.20.20 56 355 6.1E-6 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like APQ13_RS04390 a4f278000dfe974ac90aa51c660155fe 518 Gene3D G3DSA:2.160.20.20 359 447 8.1E-4 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 6.4E-31 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 PANTHER PTHR10000 1 269 4.5E-105 T 25-04-2016 APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 Gene3D G3DSA:3.40.50.1000 1 76 6.0E-59 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 Gene3D G3DSA:3.40.50.1000 183 268 6.0E-59 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 SUPERFAMILY SSF56784 1 268 2.8E-80 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 PANTHER PTHR10000:SF16 1 269 4.5E-105 T 25-04-2016 APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 4.1E-67 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 Gene3D G3DSA:3.30.1240.10 87 182 4.3E-45 T 25-04-2016 APQ13_RS04475 8e7d880d733084cfc4dd6780c7eeaf1d 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 2.6E-70 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 318 8.6E-76 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 Gene3D G3DSA:3.40.50.720 3 193 1.4E-58 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 7 330 4.4E-135 T 25-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 PANTHER PTHR10366:SF437 6 345 1.4E-191 T 25-04-2016 APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 Gene3D G3DSA:3.90.25.10 194 333 8.2E-48 T 25-04-2016 APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 SUPERFAMILY SSF51735 5 335 1.12E-93 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01210 4d121e4f5167351142f0c89534d73bf1 348 PANTHER PTHR10366 6 345 1.4E-191 T 25-04-2016 APQ13_RS04065 8586da0d6307c3884510aa49ac89e7d4 294 PANTHER PTHR10245 1 62 8.5E-19 T 25-04-2016 APQ13_RS04065 8586da0d6307c3884510aa49ac89e7d4 294 SMART SM00530 6 61 1.7E-17 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS04065 8586da0d6307c3884510aa49ac89e7d4 294 PANTHER PTHR10245:SF47 1 62 8.5E-19 T 25-04-2016 APQ13_RS04065 8586da0d6307c3884510aa49ac89e7d4 294 Gene3D G3DSA:1.10.260.40 1 64 9.9E-25 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS04065 8586da0d6307c3884510aa49ac89e7d4 294 SUPERFAMILY SSF47413 1 66 2.82E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS04065 8586da0d6307c3884510aa49ac89e7d4 294 Pfam PF01381 Helix-turn-helix 7 61 1.7E-16 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 PANTHER PTHR33434:SF4 1 555 2.7E-251 T 25-04-2016 APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 9 555 1.7E-212 T 25-04-2016 IPR019986 DAK2 domain-containing protein YloV APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 Pfam PF13684 Dihydroxyacetone kinase family 240 555 5.4E-127 T 25-04-2016 IPR033470 Uncharacterised protein, DhaK domain APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 Pfam PF02734 DAK2 domain 34 198 7.1E-42 T 25-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 SMART SM01120 34 199 2.5E-70 T 25-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 SMART SM01121 240 555 1.0E-190 T 25-04-2016 IPR033470 Uncharacterised protein, DhaK domain APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 PANTHER PTHR33434 1 555 2.7E-251 T 25-04-2016 APQ13_RS06730 46c624d0ff7cca72803b1a8356bc8b88 555 SUPERFAMILY SSF101473 4 200 1.01E-47 T 25-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APQ13_RS04125 095ce5fcabe0f256b40f7e58f57576bc 277 Pfam PF05368 NmrA-like family 2 214 2.6E-23 T 25-04-2016 IPR008030 NmrA-like domain APQ13_RS04125 095ce5fcabe0f256b40f7e58f57576bc 277 SUPERFAMILY SSF51735 2 235 2.32E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04125 095ce5fcabe0f256b40f7e58f57576bc 277 PANTHER PTHR14194 2 276 3.2E-54 T 25-04-2016 APQ13_RS04125 095ce5fcabe0f256b40f7e58f57576bc 277 Gene3D G3DSA:3.40.50.720 2 209 7.8E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04125 095ce5fcabe0f256b40f7e58f57576bc 277 PANTHER PTHR14194:SF73 2 276 3.2E-54 T 25-04-2016 APQ13_RS07965 b1eac9b6421dab46e7c6fe35c33193e1 292 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 217 2.7E-58 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT APQ13_RS07965 b1eac9b6421dab46e7c6fe35c33193e1 292 PANTHER PTHR33545 1 286 2.0E-90 T 25-04-2016 APQ13_RS07965 b1eac9b6421dab46e7c6fe35c33193e1 292 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 276 1.7E-18 T 25-04-2016 IPR019264 Domain of unknown function DUF2179 APQ13_RS07965 b1eac9b6421dab46e7c6fe35c33193e1 292 PANTHER PTHR33545:SF7 1 286 2.0E-90 T 25-04-2016 APQ13_RS07965 b1eac9b6421dab46e7c6fe35c33193e1 292 PIRSF PIRSF006483 1 284 1.6E-73 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 SUPERFAMILY SSF53659 3 344 9.72E-118 T 25-04-2016 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 SMART SM01329 3 340 2.4E-185 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 340 2.7E-129 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 PANTHER PTHR11835:SF35 1 344 2.6E-187 T 25-04-2016 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 235 254 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 PANTHER PTHR11835 1 344 2.6E-187 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 344 45.264 T 25-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 342 2.0E-139 T 25-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APQ13_RS01540 227dcf6f4bed79322af41216cce72651 344 Gene3D G3DSA:3.40.718.10 2 344 1.0E-127 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PANTHER PTHR10458:SF8 16 204 1.1E-83 T 25-04-2016 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 17 198 1.9E-37 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PRINTS PR01576 Peptide deformylase signature 161 190 9.95E-28 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PRINTS PR01576 Peptide deformylase signature 59 88 9.95E-28 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PRINTS PR01576 Peptide deformylase signature 142 160 9.95E-28 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PRINTS PR01576 Peptide deformylase signature 129 140 9.95E-28 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PIRSF PIRSF004749 3 204 1.4E-43 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 Hamap MF_00163 Peptide deformylase [def]. 15 203 25.436 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 PANTHER PTHR10458 16 204 1.1E-83 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 Pfam PF01327 Polypeptide deformylase 16 192 2.2E-43 T 25-04-2016 IPR023635 Peptide deformylase APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 Gene3D G3DSA:3.90.45.10 16 200 2.2E-51 T 25-04-2016 IPR023635 Peptide deformylase APQ13_RS07020 183f10d3e80564f1180238740f777f73 204 SUPERFAMILY SSF56420 4 200 1.31E-56 T 25-04-2016 IPR023635 Peptide deformylase APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 SUPERFAMILY SSF52096 8 255 1.85E-80 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 10 95 8.3E-40 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PANTHER PTHR22855 1 256 3.4E-92 T 25-04-2016 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 144 153 6.3E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 100 113 6.3E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 60 78 6.3E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 129 6.3E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 97 6.3E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 35 46 6.3E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 256 35.406 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 Gene3D G3DSA:3.90.226.10 9 215 1.4E-46 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 7 256 3.0E-106 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09680 664d2d57f825cea9a075bae950039ad8 256 PANTHER PTHR22855:SF42 1 256 3.4E-92 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 SMART SM00062 27 264 2.6E-33 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 SUPERFAMILY SSF53850 1 247 6.21E-46 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 SUPERFAMILY SSF161098 291 496 5.89E-44 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 Gene3D G3DSA:3.40.190.10 225 249 2.8E-30 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 Gene3D G3DSA:3.40.190.10 25 116 2.8E-30 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 332 505 3.4E-19 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 Gene3D G3DSA:3.40.190.10 117 212 1.8E-13 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 291 399 8.3E-21 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 PANTHER PTHR30614:SF15 19 510 7.0E-141 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 PANTHER PTHR30614 19 510 7.0E-141 T 25-04-2016 APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 248 2.3E-35 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS06675 6f65e27d2e18d5461497ed1a794dc247 517 Gene3D G3DSA:1.10.3720.10 290 506 4.6E-56 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04980 c35673a5a1f143445a532716bb5ea28c 278 SUPERFAMILY SSF52200 19 104 1.57E-8 T 25-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 APQ13_RS04980 c35673a5a1f143445a532716bb5ea28c 278 Pfam PF13676 TIR domain 19 110 3.1E-7 T 25-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 350 6.0E-120 T 25-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 Gene3D G3DSA:3.40.50.1970 2 172 8.4E-64 T 25-04-2016 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 SUPERFAMILY SSF56796 1 354 9.03E-108 T 25-04-2016 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 PIRSF PIRSF001455 3 354 7.0E-105 T 25-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 Gene3D G3DSA:1.20.1090.10 174 354 3.0E-55 T 25-04-2016 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 Pfam PF01761 3-dehydroquinate synthase 70 323 5.7E-101 T 25-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 38.699 T 25-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APQ13_RS04200 a029b7f6a18e9757e83c8f4ba479a78e 355 PANTHER PTHR21090 1 355 1.2E-145 T 25-04-2016 APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Pfam PF01709 Transcriptional regulator 4 235 3.4E-81 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Gene3D G3DSA:1.10.10.200 1 77 5.6E-29 T 25-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Gene3D G3DSA:3.30.70.980 132 202 2.7E-23 T 25-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 62.071 T 25-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.216 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 1.5E-70 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 SUPERFAMILY SSF75625 1 236 7.46E-81 T 25-04-2016 IPR029072 YebC-like APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 PANTHER PTHR12532 1 236 2.0E-150 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Gene3D G3DSA:3.30.1270.10 210 236 3.3E-36 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 Gene3D G3DSA:3.30.1270.10 81 131 3.3E-36 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APQ13_RS09385 405ea79d329cdf127ae2230a1d5e4143 238 PANTHER PTHR12532:SF4 1 236 2.0E-150 T 25-04-2016 APQ13_RS01925 c4e97eaded0ee6ea70c24f55c1dac0d5 219 PANTHER PTHR15020:SF29 3 201 1.2E-12 T 25-04-2016 APQ13_RS01925 c4e97eaded0ee6ea70c24f55c1dac0d5 219 PANTHER PTHR15020 3 201 1.2E-12 T 25-04-2016 APQ13_RS01925 c4e97eaded0ee6ea70c24f55c1dac0d5 219 Gene3D G3DSA:3.40.50.720 1 209 1.0E-18 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01925 c4e97eaded0ee6ea70c24f55c1dac0d5 219 SUPERFAMILY SSF51735 1 207 1.01E-18 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01925 c4e97eaded0ee6ea70c24f55c1dac0d5 219 Pfam PF13460 NAD(P)H-binding 8 203 1.1E-19 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 Gene3D G3DSA:3.40.50.300 519 696 1.1E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 SMART SM00490 556 653 5.6E-10 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 793 24.01 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 Pfam PF04851 Type III restriction enzyme, res subunit 257 420 5.0E-19 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 SUPERFAMILY SSF52540 252 434 3.01E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 SMART SM00487 254 450 2.0E-20 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 TIGRFAM TIGR00595 priA: primosomal protein N' 281 790 1.7E-201 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 Pfam PF00271 Helicase conserved C-terminal domain 568 653 2.4E-9 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 SUPERFAMILY SSF52540 521 700 5.66E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 Gene3D G3DSA:3.40.50.300 243 443 1.6E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05580 53db2cd13b040649443a48d2f86d2ad1 794 PANTHER PTHR30580 1 794 6.7E-275 T 25-04-2016 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 Gene3D G3DSA:3.30.465.10 351 433 3.1E-24 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 Pfam PF01595 Domain of unknown function DUF21 15 200 3.0E-45 T 25-04-2016 IPR002550 Domain of unknown function DUF21 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 SUPERFAMILY SSF56176 353 433 1.53E-17 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 PANTHER PTHR22777:SF8 2 445 6.8E-185 T 25-04-2016 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 Gene3D G3DSA:3.10.580.10 203 350 8.3E-17 T 25-04-2016 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 SMART SM01091 352 436 1.0E-14 T 25-04-2016 IPR005170 Transporter-associated domain APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 SUPERFAMILY SSF54631 203 340 2.32E-29 T 25-04-2016 APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 Pfam PF00571 CBS domain 218 272 9.1E-7 T 25-04-2016 IPR000644 CBS domain APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 Pfam PF00571 CBS domain 289 337 3.7E-4 T 25-04-2016 IPR000644 CBS domain APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 Pfam PF03471 Transporter associated domain 353 433 2.7E-15 T 25-04-2016 IPR005170 Transporter-associated domain APQ13_RS00165 5d4c7379d37357b5fba54216b7a29e11 445 PANTHER PTHR22777 2 445 6.8E-185 T 25-04-2016 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PANTHER PTHR10353:SF35 5 477 2.2E-235 T 25-04-2016 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PANTHER PTHR10353 5 477 2.2E-235 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 Pfam PF00232 Glycosyl hydrolase family 1 3 474 7.5E-132 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 Gene3D G3DSA:3.20.20.80 2 474 1.0E-153 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 25-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 4.6E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 4.6E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 4.6E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 4.6E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 4.6E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS00585 73307b3c685a6bd483b9b1a6fbca1314 477 SUPERFAMILY SSF51445 2 470 2.37E-166 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS05420 d0e4c61e9f09889017472bbf0db0a598 429 Pfam PF03611 PTS system sugar-specific permease component 10 408 5.8E-122 T 25-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APQ13_RS05420 d0e4c61e9f09889017472bbf0db0a598 429 PANTHER PTHR33843 1 415 1.6E-145 T 25-04-2016 APQ13_RS05420 d0e4c61e9f09889017472bbf0db0a598 429 PANTHER PTHR33843:SF4 1 415 1.6E-145 T 25-04-2016 APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 SUPERFAMILY SSF53223 1 106 1.32E-35 T 25-04-2016 APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 284 33.531 T 25-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 Gene3D G3DSA:3.40.192.10 2 110 1.6E-40 T 25-04-2016 APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 6.0E-28 T 25-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 Gene3D G3DSA:3.40.50.720 111 287 6.6E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 SUPERFAMILY SSF51735 107 285 2.36E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 PANTHER PTHR21089 1 286 3.1E-87 T 25-04-2016 APQ13_RS04205 07478270524f9768fc8c8a22bf45e449 289 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 284 3.9E-66 T 25-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 PANTHER PTHR23406 1 325 1.7E-49 T 25-04-2016 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 Gene3D G3DSA:3.40.50.10750 138 299 3.2E-68 T 25-04-2016 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 Pfam PF01515 Phosphate acetyl/butaryl transferase 9 323 4.7E-121 T 25-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 PIRSF PIRSF000428 1 330 4.2E-109 T 25-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 PANTHER PTHR23406:SF3 1 325 1.7E-49 T 25-04-2016 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 SUPERFAMILY SSF53659 7 326 3.41E-96 T 25-04-2016 APQ13_RS03065 693739be7df7169c6f7cc0fa5495985b 331 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 21 323 1.5E-119 T 25-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Gene3D G3DSA:3.40.50.300 282 299 4.3E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Pfam PF12848 ABC transporter 231 311 2.9E-25 T 25-04-2016 IPR032781 ABC-transporter extension domain APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 PANTHER PTHR19211 1 580 0.0 T 25-04-2016 APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 SUPERFAMILY SSF52540 307 531 7.51E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Gene3D G3DSA:3.40.50.300 328 543 1.4E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Gene3D G3DSA:3.40.50.300 8 102 1.2E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Gene3D G3DSA:3.40.50.300 139 281 1.2E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Gene3D G3DSA:3.40.50.300 577 612 5.3E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 SUPERFAMILY SSF52540 132 249 1.17E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 SMART SM00382 28 243 2.5E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 SMART SM00382 351 517 3.3E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 SUPERFAMILY SSF52540 4 94 1.17E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 PANTHER PTHR19211:SF64 1 580 0.0 T 25-04-2016 APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Pfam PF16326 ABC transporter C-terminal domain 568 632 1.7E-8 T 25-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Pfam PF00005 ABC transporter 20 191 4.3E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01320 ccd3f0f43f2f4470fb06a118b1e55756 637 Pfam PF00005 ABC transporter 344 472 1.5E-19 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03525 0d53bb6c769f6c639d677b16b9fd1f97 230 Gene3D G3DSA:1.10.3720.10 14 226 1.2E-37 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03525 0d53bb6c769f6c639d677b16b9fd1f97 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 219 9.8E-16 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03525 0d53bb6c769f6c639d677b16b9fd1f97 230 PANTHER PTHR30614 7 230 4.1E-53 T 25-04-2016 APQ13_RS03525 0d53bb6c769f6c639d677b16b9fd1f97 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 8.6E-14 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS03525 0d53bb6c769f6c639d677b16b9fd1f97 230 SUPERFAMILY SSF161098 14 211 7.06E-33 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06610 1f0005478d336e28f8019c211a05a4a4 304 PANTHER PTHR30465:SF74 1 303 3.5E-124 T 25-04-2016 APQ13_RS06610 1f0005478d336e28f8019c211a05a4a4 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 1.3E-40 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06610 1f0005478d336e28f8019c211a05a4a4 304 Gene3D G3DSA:1.10.3720.10 87 298 3.8E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06610 1f0005478d336e28f8019c211a05a4a4 304 SUPERFAMILY SSF161098 89 285 4.91E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS06610 1f0005478d336e28f8019c211a05a4a4 304 PANTHER PTHR30465 1 303 3.5E-124 T 25-04-2016 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 PANTHER PTHR11806 6 442 5.4E-233 T 25-04-2016 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 346 369 - T 25-04-2016 IPR020595 MnmG-related, conserved site APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 SUPERFAMILY SSF51905 8 373 6.48E-24 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 PANTHER PTHR11806:SF2 6 442 5.4E-233 T 25-04-2016 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 444 35.603 T 25-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 Pfam PF01134 Glucose inhibited division protein A 6 376 1.4E-112 T 25-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 Gene3D G3DSA:3.50.50.60 328 403 7.8E-13 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 Gene3D G3DSA:3.50.50.60 8 229 7.8E-13 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03210 b4bf123176017de7f75f4782998ce0dc 444 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 442 1.4E-201 T 25-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 SUPERFAMILY SSF90123 3 316 1.05E-62 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 Gene3D G3DSA:3.40.50.300 330 560 1.1E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 PANTHER PTHR24221:SF190 1 577 5.1E-140 T 25-04-2016 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 Gene3D G3DSA:1.20.1560.10 2 316 1.5E-57 T 25-04-2016 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 Pfam PF00005 ABC transporter 349 499 2.7E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 SUPERFAMILY SSF52540 330 569 4.24E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 PANTHER PTHR24221 1 577 5.1E-140 T 25-04-2016 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 Pfam PF00664 ABC transporter transmembrane region 16 283 1.4E-39 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02900 ccde0d6690abece47e8e1215da32d2c0 577 SMART SM00382 358 545 9.6E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 SUPERFAMILY SSF46785 1 70 3.45E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 PANTHER PTHR34471 1 142 3.1E-38 T 25-04-2016 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 Pfam PF01316 Arginine repressor, DNA binding domain 1 69 4.0E-20 T 25-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 PRINTS PR01467 Bacterial arginine repressor signature 21 34 5.4E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 PRINTS PR01467 Bacterial arginine repressor signature 114 129 5.4E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 PRINTS PR01467 Bacterial arginine repressor signature 37 52 5.4E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 PRINTS PR01467 Bacterial arginine repressor signature 84 97 5.4E-14 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 Gene3D G3DSA:1.10.10.10 9 66 3.6E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 Hamap MF_00173 Arginine repressor [argR]. 1 145 47.186 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 PANTHER PTHR34471:SF1 1 142 3.1E-38 T 25-04-2016 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 Pfam PF02863 Arginine repressor, C-terminal domain 83 138 6.3E-15 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 142 1.9E-43 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 Gene3D G3DSA:3.30.1360.40 82 141 8.8E-19 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 SUPERFAMILY SSF55252 80 143 2.49E-16 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS07990 00791cb15b46143f36d5e26b6fec0912 145 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 85 132 7.0E-6 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 PIRSF PIRSF006779 1 278 4.7E-98 T 25-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 SUPERFAMILY SSF101852 170 276 2.09E-27 T 25-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 273 2.2E-66 T 25-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 PANTHER PTHR35092 2 281 6.5E-170 T 25-04-2016 APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 PANTHER PTHR35092:SF2 2 281 6.5E-170 T 25-04-2016 APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 SUPERFAMILY SSF102522 4 167 3.66E-53 T 25-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal APQ13_RS08850 e46e843c076056ecd078079b17e2cc7c 281 Gene3D G3DSA:2.40.30.90 170 276 1.3E-24 T 25-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APQ13_RS07780 55c6acc30c7068ce9eb0590f88ca5b65 210 SUPERFAMILY SSF89623 1 156 4.58E-29 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS07780 55c6acc30c7068ce9eb0590f88ca5b65 210 Pfam PF02502 Ribose/Galactose Isomerase 4 114 1.9E-22 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS07780 55c6acc30c7068ce9eb0590f88ca5b65 210 PANTHER PTHR30345:SF0 1 154 1.3E-15 T 25-04-2016 APQ13_RS07780 55c6acc30c7068ce9eb0590f88ca5b65 210 PANTHER PTHR30345 1 154 1.3E-15 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS07780 55c6acc30c7068ce9eb0590f88ca5b65 210 Gene3D G3DSA:3.40.1400.10 1 206 3.1E-66 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 Pfam PF01938 TRAM domain 6 59 2.0E-4 T 25-04-2016 IPR002792 TRAM domain APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 SUPERFAMILY SSF50249 3 59 1.26E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 PANTHER PTHR11061 3 455 2.2E-257 T 25-04-2016 APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 443 1.0E-133 T 25-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 Gene3D G3DSA:3.40.50.150 246 448 8.1E-58 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 PANTHER PTHR11061:SF35 3 455 2.2E-257 T 25-04-2016 APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 433 443 - T 25-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 382 413 - T 25-04-2016 IPR030390 RNA methyltransferase TrmA, active site APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 SUPERFAMILY SSF53335 68 450 1.26E-73 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 273 450 8.5E-19 T 25-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APQ13_RS09480 7a765559d1c7ae1110948a7969db75fc 459 Gene3D G3DSA:2.40.50.140 2 79 1.6E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 Gene3D G3DSA:1.10.10.10 10 79 2.5E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 Gene3D G3DSA:3.30.70.1450 138 208 5.1E-16 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 SUPERFAMILY SSF46785 9 85 1.12E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 Pfam PF02080 TrkA-C domain 139 207 2.5E-9 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 SMART SM00345 16 75 2.8E-9 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 SUPERFAMILY SSF116726 134 208 6.93E-15 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS02975 59e04defb499bff94583ef3bab685752 210 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.2E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 SMART SM00490 253 334 6.9E-35 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 SUPERFAMILY SSF52540 70 355 1.15E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 Pfam PF00270 DEAD/DEAH box helicase 26 190 4.2E-51 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 Gene3D G3DSA:3.40.50.300 2 207 2.8E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 PANTHER PTHR24031 2 516 6.5E-237 T 25-04-2016 APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 Gene3D G3DSA:3.40.50.300 208 369 3.2E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 Pfam PF00271 Helicase conserved C-terminal domain 226 334 2.4E-28 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 PANTHER PTHR24031:SF261 2 516 6.5E-237 T 25-04-2016 APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 SMART SM00487 20 217 4.1E-63 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 1 512 44.674 T 25-04-2016 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 APQ13_RS04950 cc2ea8edfcc6c3f1af1bb904a6cd94a1 517 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 25-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APQ13_RS04580 5e7aa16f08ff6d21f7fadb1cf6580f3e 64 Pfam PF13459 4Fe-4S single cluster domain 8 62 5.3E-8 T 25-04-2016 APQ13_RS04580 5e7aa16f08ff6d21f7fadb1cf6580f3e 64 SUPERFAMILY SSF54862 1 63 1.7E-7 T 25-04-2016 APQ13_RS04580 5e7aa16f08ff6d21f7fadb1cf6580f3e 64 Gene3D G3DSA:3.30.70.20 1 62 2.1E-14 T 25-04-2016 APQ13_RS01250 88da6870b425db1167b2f1696f145519 549 Pfam PF05670 Domain of unknown function (DUF814) 433 518 1.3E-24 T 25-04-2016 IPR008532 Domain of unknown function DUF814 APQ13_RS01250 88da6870b425db1167b2f1696f145519 549 PANTHER PTHR15239 402 539 2.2E-117 T 25-04-2016 APQ13_RS01250 88da6870b425db1167b2f1696f145519 549 PANTHER PTHR15239 1 385 2.2E-117 T 25-04-2016 APQ13_RS01250 88da6870b425db1167b2f1696f145519 549 Gene3D G3DSA:3.40.970.40 240 273 7.9E-13 T 25-04-2016 APQ13_RS01250 88da6870b425db1167b2f1696f145519 549 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 426 1.4E-149 T 25-04-2016 APQ13_RS01250 88da6870b425db1167b2f1696f145519 549 Gene3D G3DSA:2.30.310.10 1 167 2.4E-61 T 25-04-2016 APQ13_RS09465 ffee5a57f1f9ca35b8f4a815cf568e41 106 Gene3D G3DSA:3.10.450.150 1 104 1.9E-44 T 25-04-2016 APQ13_RS09465 ffee5a57f1f9ca35b8f4a815cf568e41 106 Pfam PF06124 Staphylococcal protein of unknown function (DUF960) 9 101 4.7E-30 T 25-04-2016 IPR009303 Protein of unknown function DUF960 APQ13_RS06175 003d9863ce598af09b473c5b3cc7c73d 148 Gene3D G3DSA:3.30.428.10 2 144 1.7E-32 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 APQ13_RS06175 003d9863ce598af09b473c5b3cc7c73d 148 SUPERFAMILY SSF54197 1 146 7.56E-29 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 APQ13_RS06175 003d9863ce598af09b473c5b3cc7c73d 148 Pfam PF01230 HIT domain 27 103 2.8E-8 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS06175 003d9863ce598af09b473c5b3cc7c73d 148 PANTHER PTHR23089 1 143 1.3E-48 T 25-04-2016 IPR001310 Histidine triad (HIT) protein APQ13_RS06175 003d9863ce598af09b473c5b3cc7c73d 148 PANTHER PTHR23089:SF13 1 143 1.3E-48 T 25-04-2016 APQ13_RS00150 4d237e75c6bf9b2aab216335a5c4aa5c 181 Gene3D G3DSA:3.40.50.150 11 155 1.7E-14 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS00150 4d237e75c6bf9b2aab216335a5c4aa5c 181 Pfam PF06962 Putative rRNA methylase 44 179 2.3E-52 T 25-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APQ13_RS00150 4d237e75c6bf9b2aab216335a5c4aa5c 181 PANTHER PTHR35276:SF1 2 181 1.2E-47 T 25-04-2016 APQ13_RS00150 4d237e75c6bf9b2aab216335a5c4aa5c 181 PANTHER PTHR35276 2 181 1.2E-47 T 25-04-2016 APQ13_RS00150 4d237e75c6bf9b2aab216335a5c4aa5c 181 SUPERFAMILY SSF53335 8 175 1.25E-18 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05090 8a79a1a50002bcdebd2026d113e33db1 447 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 1.1E-24 T 25-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APQ13_RS05090 8a79a1a50002bcdebd2026d113e33db1 447 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 439 8.4E-135 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05090 8a79a1a50002bcdebd2026d113e33db1 447 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 439 27.954 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APQ13_RS05090 8a79a1a50002bcdebd2026d113e33db1 447 Pfam PF02601 Exonuclease VII, large subunit 122 436 2.0E-92 T 25-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APQ13_RS05090 8a79a1a50002bcdebd2026d113e33db1 447 PANTHER PTHR30008 1 447 5.1E-156 T 25-04-2016 APQ13_RS05090 8a79a1a50002bcdebd2026d113e33db1 447 PANTHER PTHR30008:SF0 1 447 5.1E-156 T 25-04-2016 APQ13_RS04385 d8c02003dee2277afc6d3f9fb8401b8f 352 Pfam PF11311 Protein of unknown function (DUF3114) 53 322 7.2E-106 T 25-04-2016 IPR021462 Protein of unknown function DUF3114 APQ13_RS00670 461d27756e6d9d843ac6c3afcb2b894d 589 PANTHER PTHR37417:SF1 1 586 0.0 T 25-04-2016 APQ13_RS00670 461d27756e6d9d843ac6c3afcb2b894d 589 Pfam PF06100 MCRA family 23 519 3.3E-213 T 25-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 APQ13_RS00670 461d27756e6d9d843ac6c3afcb2b894d 589 PANTHER PTHR37417 1 586 0.0 T 25-04-2016 APQ13_RS00670 461d27756e6d9d843ac6c3afcb2b894d 589 Gene3D G3DSA:3.50.50.60 233 261 4.5E-6 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS00670 461d27756e6d9d843ac6c3afcb2b894d 589 Gene3D G3DSA:3.50.50.60 16 67 4.5E-6 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS00670 461d27756e6d9d843ac6c3afcb2b894d 589 SUPERFAMILY SSF51905 26 259 2.19E-17 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 PANTHER PTHR32219:SF5 4 259 3.5E-59 T 25-04-2016 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 Pfam PF01479 S4 domain 184 230 1.0E-5 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 SUPERFAMILY SSF55174 39 129 8.11E-27 T 25-04-2016 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 SUPERFAMILY SSF55174 181 248 8.11E-27 T 25-04-2016 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 Gene3D G3DSA:3.10.290.10 182 237 4.7E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 PANTHER PTHR32219 4 259 3.5E-59 T 25-04-2016 APQ13_RS05190 101dd448c3b676d6d2efdde47dae7cbb 262 SMART SM00363 184 255 4.3E-8 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 Gene3D G3DSA:3.30.460.10 10 153 1.1E-34 T 25-04-2016 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 PANTHER PTHR21262:SF11 47 202 2.7E-32 T 25-04-2016 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 PANTHER PTHR21262 47 202 2.7E-32 T 25-04-2016 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 Pfam PF04607 Region found in RelA / SpoT proteins 46 170 4.3E-35 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 Gene3D G3DSA:1.10.287.860 156 202 2.8E-20 T 25-04-2016 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 SUPERFAMILY SSF81301 13 203 6.7E-49 T 25-04-2016 APQ13_RS03560 692ffb1cf7c4d3714b137e68d78a58a4 207 SMART SM00954 46 173 2.1E-41 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 SUPERFAMILY SSF52777 998 1226 2.56E-32 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Gene3D G3DSA:3.40.50.980 230 385 9.4E-39 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 SUPERFAMILY SSF47336 735 836 1.15E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 256 652 3.1E-103 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Gene3D G3DSA:3.40.50.980 386 541 3.7E-32 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Pfam PF00501 AMP-binding enzyme 241 630 2.7E-71 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Pfam PF00550 Phosphopantetheine attachment site 739 802 2.7E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Pfam PF13745 HxxPF-repeated domain 1124 1212 1.1E-10 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Gene3D G3DSA:1.10.1200.10 745 807 1.9E-17 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 PANTHER PTHR24095:SF137 94 1225 5.0E-176 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 SUPERFAMILY SSF52777 821 1010 6.0E-34 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 ProSitePatterns PS00012 Phosphopantetheine attachment site. 761 776 - T 25-04-2016 IPR006162 Phosphopantetheine attachment site APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 PANTHER PTHR24095 94 1225 5.0E-176 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Gene3D G3DSA:2.30.38.10 542 619 5.1E-18 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 SUPERFAMILY SSF56801 186 748 9.29E-106 T 25-04-2016 APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 ProSitePatterns PS00455 Putative AMP-binding domain signature. 376 387 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Pfam PF00668 Condensation domain 821 1102 1.7E-57 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01680 f08ce188901a88ce2e97831f28d998d4 1229 Gene3D G3DSA:3.30.300.30 626 744 2.4E-21 T 25-04-2016 APQ13_RS02860 cb449df81dd3beb49577efe3093209b4 61 SUPERFAMILY SSF55331 2 58 1.15E-16 T 25-04-2016 IPR014347 Tautomerase/MIF superfamily APQ13_RS02860 cb449df81dd3beb49577efe3093209b4 61 Gene3D G3DSA:3.30.429.20 1 58 1.8E-21 T 25-04-2016 APQ13_RS02860 cb449df81dd3beb49577efe3093209b4 61 PANTHER PTHR35530 1 57 9.0E-14 T 25-04-2016 APQ13_RS02860 cb449df81dd3beb49577efe3093209b4 61 Pfam PF01361 Tautomerase enzyme 2 59 1.2E-23 T 25-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 35.779 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 PANTHER PTHR21091 9 233 4.0E-85 T 25-04-2016 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 PIRSF PIRSF005917 3 288 6.2E-98 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 25-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 286 3.1E-80 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 Gene3D G3DSA:3.40.1010.10 14 123 6.5E-12 T 25-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 PANTHER PTHR21091:SF18 9 233 4.0E-85 T 25-04-2016 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 214 4.7E-17 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 Gene3D G3DSA:3.30.950.10 124 234 1.1E-38 T 25-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APQ13_RS00325 def58f826eb1d8ea9874d8ee241c9e79 288 SUPERFAMILY SSF53790 13 231 9.68E-79 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APQ13_RS05625 9e3ca4a1c4b86a47e136e884765fc4ec 173 Hamap MF_01575 UPF0398 protein . 1 171 35.759 T 25-04-2016 IPR010697 Protein of unknown function DUF1273 APQ13_RS05625 9e3ca4a1c4b86a47e136e884765fc4ec 173 Gene3D G3DSA:3.40.50.450 1 172 9.3E-60 T 25-04-2016 APQ13_RS05625 9e3ca4a1c4b86a47e136e884765fc4ec 173 Pfam PF06908 Protein of unknown function (DUF1273) 4 165 1.8E-62 T 25-04-2016 IPR010697 Protein of unknown function DUF1273 APQ13_RS05625 9e3ca4a1c4b86a47e136e884765fc4ec 173 PIRSF PIRSF021290 1 173 3.2E-69 T 25-04-2016 IPR010697 Protein of unknown function DUF1273 APQ13_RS05625 9e3ca4a1c4b86a47e136e884765fc4ec 173 SUPERFAMILY SSF102405 1 170 1.37E-56 T 25-04-2016 APQ13_RS05625 9e3ca4a1c4b86a47e136e884765fc4ec 173 PANTHER PTHR38440 2 173 5.4E-39 T 25-04-2016 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Gene3D G3DSA:3.40.50.360 1 181 3.9E-44 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Gene3D G3DSA:3.50.50.60 286 355 4.0E-91 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Gene3D G3DSA:3.50.50.60 400 588 4.0E-91 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Gene3D G3DSA:3.50.50.60 740 800 4.0E-91 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 SUPERFAMILY SSF56425 590 740 1.79E-34 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Pfam PF04205 FMN-binding domain 201 273 1.6E-10 T 25-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 SUPERFAMILY SSF52218 1 172 6.98E-37 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Gene3D G3DSA:3.90.700.10 613 735 9.0E-33 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 SMART SM00900 201 275 3.2E-16 T 25-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 PANTHER PTHR11632 297 353 4.7E-95 T 25-04-2016 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 PANTHER PTHR11632 396 799 4.7E-95 T 25-04-2016 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Pfam PF03358 NADPH-dependent FMN reductase 1 147 4.8E-32 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 425 796 3.3E-91 T 25-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 SUPERFAMILY SSF51905 291 360 2.71E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 SUPERFAMILY SSF51905 743 800 2.71E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 SUPERFAMILY SSF51905 405 605 2.71E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06885 249dce087a4114c6542a4cf8cb010619 804 Pfam PF00890 FAD binding domain 302 784 3.9E-66 T 25-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APQ13_RS05265 7687a8520303b77de04af5268ca0ffdc 218 PANTHER PTHR30487:SF0 1 215 7.0E-31 T 25-04-2016 APQ13_RS05265 7687a8520303b77de04af5268ca0ffdc 218 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 9 87 8.5E-22 T 25-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APQ13_RS05265 7687a8520303b77de04af5268ca0ffdc 218 PANTHER PTHR30487 1 215 7.0E-31 T 25-04-2016 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 PANTHER PTHR30544:SF5 2 355 1.8E-171 T 25-04-2016 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 349 69.909 T 25-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 Gene3D G3DSA:3.20.20.70 96 330 2.7E-17 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 Pfam PF04055 Radical SAM superfamily 105 273 9.4E-18 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 PANTHER PTHR30544 2 355 1.8E-171 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 PIRSF PIRSF006004 1 361 3.8E-136 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 Pfam PF13394 4Fe-4S single cluster domain 110 203 4.5E-8 T 25-04-2016 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 SUPERFAMILY SSF102114 97 311 1.44E-15 T 25-04-2016 APQ13_RS05345 f32a3f219b4be8948cdcad0e046114d4 361 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 1 353 3.7E-131 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS07145 65e2e5d80ff6963a93dab8dd055a0546 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 2 144 2.2E-34 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS07145 65e2e5d80ff6963a93dab8dd055a0546 150 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 2 129 9.1E-39 T 25-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS07145 65e2e5d80ff6963a93dab8dd055a0546 150 SUPERFAMILY SSF55804 2 144 1.02E-35 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS07145 65e2e5d80ff6963a93dab8dd055a0546 150 PANTHER PTHR30505 1 147 1.2E-30 T 25-04-2016 APQ13_RS07145 65e2e5d80ff6963a93dab8dd055a0546 150 Gene3D G3DSA:3.40.930.10 1 146 3.1E-40 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 SUPERFAMILY SSF52402 5 210 2.43E-63 T 25-04-2016 APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 Gene3D G3DSA:3.40.50.620 4 210 2.3E-78 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 203 2.2E-79 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 PIRSF PIRSF006293 2 217 1.4E-77 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 Pfam PF06508 Queuosine biosynthesis protein QueC 6 210 2.9E-84 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 PANTHER PTHR11587:SF3 1 210 2.8E-94 T 25-04-2016 APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 PANTHER PTHR11587 1 210 2.8E-94 T 25-04-2016 APQ13_RS03590 ebb9e8f527001433236f85479c6e4911 217 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 216 48.257 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 PRINTS PR00701 60kDa inner membrane protein signature 133 156 3.1E-7 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 PRINTS PR00701 60kDa inner membrane protein signature 216 239 3.1E-7 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 PANTHER PTHR12428:SF20 4 306 4.7E-85 T 25-04-2016 APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 Pfam PF02096 60Kd inner membrane protein 61 249 1.4E-38 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 PANTHER PTHR12428 4 306 4.7E-85 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 5 253 29.027 T 25-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes APQ13_RS00015 4bd9a4d651164f36f15669bc5a6019a8 310 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 61 249 2.6E-43 T 25-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APQ13_RS07850 07499d5b5527850635bb1482ab83cc80 94 Pfam PF01638 HxlR-like helix-turn-helix 7 93 1.6E-20 T 25-04-2016 IPR002577 Helix-turn-helix, HxlR type APQ13_RS07850 07499d5b5527850635bb1482ab83cc80 94 PANTHER PTHR33204:SF8 1 94 1.1E-21 T 25-04-2016 APQ13_RS07850 07499d5b5527850635bb1482ab83cc80 94 PANTHER PTHR33204 1 94 1.1E-21 T 25-04-2016 APQ13_RS07850 07499d5b5527850635bb1482ab83cc80 94 SUPERFAMILY SSF46785 2 91 2.42E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07850 07499d5b5527850635bb1482ab83cc80 94 Gene3D G3DSA:1.10.10.10 2 93 3.7E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS09390 9a056445b3e67b21d82f61203b0b4071 115 Pfam PF13728 F plasmid transfer operon protein 7 111 1.0E-7 T 25-04-2016 APQ13_RS09390 9a056445b3e67b21d82f61203b0b4071 115 SUPERFAMILY SSF52833 3 113 1.7E-24 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS09390 9a056445b3e67b21d82f61203b0b4071 115 Gene3D G3DSA:3.40.30.10 3 113 6.6E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 PANTHER PTHR24222 1 572 2.1E-172 T 25-04-2016 APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 SMART SM00382 362 548 1.6E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 Gene3D G3DSA:3.40.50.300 338 567 3.8E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 Pfam PF00005 ABC transporter 353 502 2.3E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 Pfam PF00664 ABC transporter transmembrane region 22 293 7.7E-18 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 SUPERFAMILY SSF52540 330 572 3.73E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 Gene3D G3DSA:1.20.1560.10 9 325 5.7E-45 T 25-04-2016 APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 SUPERFAMILY SSF90123 9 325 2.22E-56 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02525 04cac16133f3fdd5f5615783f75c161f 590 PANTHER PTHR24222:SF24 1 572 2.1E-172 T 25-04-2016 APQ13_RS08580 f8bbda451e28728b7f064e5f99a4fd25 148 Pfam PF01047 MarR family 35 92 2.9E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08580 f8bbda451e28728b7f064e5f99a4fd25 148 PANTHER PTHR18964 7 148 7.3E-22 T 25-04-2016 APQ13_RS08580 f8bbda451e28728b7f064e5f99a4fd25 148 SMART SM00347 28 131 2.6E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08580 f8bbda451e28728b7f064e5f99a4fd25 148 PANTHER PTHR18964:SF125 7 148 7.3E-22 T 25-04-2016 APQ13_RS08580 f8bbda451e28728b7f064e5f99a4fd25 148 Gene3D G3DSA:1.10.10.10 6 143 1.8E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08580 f8bbda451e28728b7f064e5f99a4fd25 148 SUPERFAMILY SSF46785 12 146 6.59E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00905 557627718c42e60807b70d66ba730822 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 9 177 3.6E-35 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 178 15.213 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 8.6E-30 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 PRINTS PR00125 ATP synthase delta subunit signature 152 170 5.9E-15 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 PRINTS PR00125 ATP synthase delta subunit signature 8 27 5.9E-15 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 PRINTS PR00125 ATP synthase delta subunit signature 137 152 5.9E-15 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 5.9E-15 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 PANTHER PTHR11910 12 178 6.1E-29 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APQ13_RS00905 557627718c42e60807b70d66ba730822 178 SUPERFAMILY SSF47928 5 102 7.32E-18 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APQ13_RS00905 557627718c42e60807b70d66ba730822 178 Gene3D G3DSA:1.10.520.20 6 96 1.0E-12 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 SUPERFAMILY SSF75005 30 341 9.14E-87 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 340 1.2E-88 T 25-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 Gene3D G3DSA:2.60.120.560 333 474 6.3E-31 T 25-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 21 457 3.2E-168 T 25-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 385 446 8.9E-6 T 25-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 SMART SM00640 37 446 8.4E-124 T 25-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 Gene3D G3DSA:2.115.10.20 43 310 4.8E-16 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 PANTHER PTHR30175 1 460 2.2E-168 T 25-04-2016 APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 SUPERFAMILY SSF49899 342 478 4.75E-25 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 PANTHER PTHR30175:SF8 1 460 2.2E-168 T 25-04-2016 APQ13_RS09200 059d635cf3bbb7d58e894c41f267dcac 479 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 25-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 401 2.1E-66 T 25-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 SUPERFAMILY SSF52374 413 658 5.42E-136 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 SUPERFAMILY SSF52374 3 226 5.42E-136 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Pfam PF09334 tRNA synthetases class I (M) 40 164 9.6E-17 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 525 547 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 558 568 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.0E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Gene3D G3DSA:3.40.50.620 422 574 2.8E-158 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Gene3D G3DSA:3.40.50.620 609 638 2.8E-158 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Gene3D G3DSA:3.40.50.620 4 222 2.8E-158 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 SUPERFAMILY SSF47323 653 832 5.42E-32 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946 609 832 0.0 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946 240 265 0.0 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946 4 207 0.0 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946 471 575 0.0 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946 288 453 0.0 T 25-04-2016 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Pfam PF08264 Anticodon-binding domain of tRNA 684 794 1.8E-17 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Gene3D G3DSA:1.10.730.10 639 768 6.5E-37 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 833 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 832 22.425 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946:SF7 609 832 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946:SF7 240 265 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946:SF7 4 207 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946:SF7 471 575 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 PANTHER PTHR11946:SF7 288 453 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 609 636 1.5E-6 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 414 571 4.2E-5 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 Gene3D G3DSA:3.90.740.10 223 421 1.7E-60 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APQ13_RS08815 ac22cf8c42b998cff7660cca984a2dd9 833 SUPERFAMILY SSF50677 226 412 2.09E-55 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 SUPERFAMILY SSF55424 329 441 3.61E-32 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 311 1.0E-67 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 SUPERFAMILY SSF51905 3 363 2.47E-59 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 Gene3D G3DSA:3.50.50.60 138 317 5.2E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PIRSF PIRSF000350 1 443 4.3E-87 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 4.7E-36 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 4.7E-36 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.7E-36 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 4.7E-36 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.7E-36 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 434 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 327 348 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 407 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 264 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.7E-65 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 Gene3D G3DSA:3.30.390.30 318 442 9.4E-37 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 444 5.1E-144 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 Gene3D G3DSA:3.50.50.60 3 137 9.9E-44 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PANTHER PTHR22912 3 443 3.5E-158 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 PANTHER PTHR22912:SF125 3 443 3.5E-158 T 25-04-2016 APQ13_RS01355 710d4f37d45dae28b973ad12ec0ba9e1 445 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 439 2.0E-29 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APQ13_RS08780 83d7c4d23ba24fb0df623bb231d96c2b 288 PANTHER PTHR11079 39 278 1.1E-52 T 25-04-2016 APQ13_RS08780 83d7c4d23ba24fb0df623bb231d96c2b 288 Pfam PF00849 RNA pseudouridylate synthase 89 235 7.4E-32 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS08780 83d7c4d23ba24fb0df623bb231d96c2b 288 SUPERFAMILY SSF55120 81 279 9.66E-58 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS08780 83d7c4d23ba24fb0df623bb231d96c2b 288 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 37 279 2.3E-58 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS08780 83d7c4d23ba24fb0df623bb231d96c2b 288 PANTHER PTHR11079:SF73 39 278 1.1E-52 T 25-04-2016 APQ13_RS00255 28d91c29b6abd3ee4b6465bc4ef9d031 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 3.6E-92 T 25-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APQ13_RS00255 28d91c29b6abd3ee4b6465bc4ef9d031 209 PANTHER PTHR10285 9 198 7.2E-106 T 25-04-2016 APQ13_RS00255 28d91c29b6abd3ee4b6465bc4ef9d031 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 4.2E-78 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS00255 28d91c29b6abd3ee4b6465bc4ef9d031 209 SUPERFAMILY SSF53271 5 207 3.28E-74 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS00255 28d91c29b6abd3ee4b6465bc4ef9d031 209 Gene3D G3DSA:3.40.50.2020 6 209 1.7E-87 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS00255 28d91c29b6abd3ee4b6465bc4ef9d031 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 49.185 T 25-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 Pfam PF08402 TOBE domain 276 344 2.0E-5 T 25-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 PANTHER PTHR24220:SF150 7 381 7.2E-176 T 25-04-2016 APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 PANTHER PTHR24220 7 381 7.2E-176 T 25-04-2016 APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 Pfam PF00005 ABC transporter 23 165 1.5E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 SMART SM00382 32 215 1.0E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 SUPERFAMILY SSF52540 5 247 8.19E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 Gene3D G3DSA:3.40.50.300 3 238 5.4E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03350 7e871688a219d48318e2a65dadc0a2d3 384 SUPERFAMILY SSF50331 240 345 1.08E-11 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 Pfam PF16326 ABC transporter C-terminal domain 553 619 3.7E-15 T 25-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 PANTHER PTHR19211 1 563 3.0E-185 T 25-04-2016 APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 SUPERFAMILY SSF52540 308 522 1.23E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 SUPERFAMILY SSF52540 6 239 3.04E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 Pfam PF00005 ABC transporter 333 466 1.5E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 Pfam PF00005 ABC transporter 20 184 5.9E-22 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 Pfam PF12848 ABC transporter 223 290 3.8E-9 T 25-04-2016 IPR032781 ABC-transporter extension domain APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 SMART SM00382 28 235 6.8E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 SMART SM00382 341 516 4.4E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 Gene3D G3DSA:3.40.50.300 6 276 2.4E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03650 5c0ffab6bbc4c7dd40d185fd38b77bfc 622 Gene3D G3DSA:3.40.50.300 317 552 1.2E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 Pfam PF00248 Aldo/keto reductase family 14 267 7.9E-55 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 Gene3D G3DSA:3.20.20.100 4 271 3.8E-104 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PRINTS PR00069 Aldo-keto reductase signature 131 148 2.9E-45 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PRINTS PR00069 Aldo-keto reductase signature 165 194 2.9E-45 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PRINTS PR00069 Aldo-keto reductase signature 202 226 2.9E-45 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.9E-45 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PRINTS PR00069 Aldo-keto reductase signature 35 59 2.9E-45 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 131 148 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PIRSF PIRSF000097 1 279 6.7E-83 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 PANTHER PTHR11732 1 267 3.5E-135 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 SUPERFAMILY SSF51430 8 266 1.31E-92 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS03945 5a3e10dbed954652cb0b22c3753049b5 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 361 3.2E-149 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 Gene3D G3DSA:3.40.640.10 16 258 3.8E-98 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 Pfam PF00266 Aminotransferase class-V 3 348 3.9E-48 T 25-04-2016 IPR000192 Aminotransferase class V domain APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 PIRSF PIRSF000525 1 363 5.9E-144 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 PANTHER PTHR21152:SF1 3 363 7.5E-159 T 25-04-2016 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 Gene3D G3DSA:3.90.1150.10 260 362 9.2E-38 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 362 49.544 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 209 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 PANTHER PTHR21152 3 363 7.5E-159 T 25-04-2016 APQ13_RS00340 602c7f858721d5183ac62eaf18532ccb 363 SUPERFAMILY SSF53383 2 360 8.03E-107 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS02000 c8c4272120cb4d9f49f109d7fc6507ea 117 Pfam PF10823 Protein of unknown function (DUF2568) 11 100 4.7E-19 T 25-04-2016 IPR021214 Protein of unknown function DUF2568 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 PANTHER PTHR21071:SF4 1 304 3.0E-123 T 25-04-2016 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 Pfam PF01565 FAD binding domain 34 162 1.7E-26 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 SUPERFAMILY SSF56176 2 192 3.09E-48 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 Gene3D G3DSA:3.30.465.10 86 224 1.7E-47 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 PANTHER PTHR21071 1 304 3.0E-123 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 297 1.7E-68 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 Gene3D G3DSA:3.90.78.10 225 302 9.5E-30 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 306 94.225 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 SUPERFAMILY SSF56194 193 298 1.18E-33 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 198 296 3.1E-25 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS03355 8badb3c6e15d52139e70b5ec7fdffa15 306 Gene3D G3DSA:3.30.43.10 2 85 1.0E-31 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APQ13_RS02745 0540dfa888b9ab7c5b856191a081e881 246 Pfam PF04203 Sortase family 96 219 6.7E-27 T 25-04-2016 IPR005754 Sortase family APQ13_RS02745 0540dfa888b9ab7c5b856191a081e881 246 TIGRFAM TIGR01076 sortase_fam: sortase 94 218 1.2E-20 T 25-04-2016 IPR005754 Sortase family APQ13_RS02745 0540dfa888b9ab7c5b856191a081e881 246 SUPERFAMILY SSF63817 26 220 9.68E-47 T 25-04-2016 IPR023365 Sortase domain APQ13_RS02745 0540dfa888b9ab7c5b856191a081e881 246 PANTHER PTHR33393 4 244 2.5E-44 T 25-04-2016 APQ13_RS02745 0540dfa888b9ab7c5b856191a081e881 246 PANTHER PTHR33393:SF3 4 244 2.5E-44 T 25-04-2016 APQ13_RS02745 0540dfa888b9ab7c5b856191a081e881 246 Gene3D G3DSA:2.40.260.10 84 221 1.2E-42 T 25-04-2016 IPR023365 Sortase domain APQ13_RS07605 0cd716f98c15cf1fb11170da3e452e9e 180 Gene3D G3DSA:3.40.50.2020 2 179 6.6E-81 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS07605 0cd716f98c15cf1fb11170da3e452e9e 180 SUPERFAMILY SSF53271 6 178 1.31E-58 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS07605 0cd716f98c15cf1fb11170da3e452e9e 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 174 6.2E-63 T 25-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 APQ13_RS07605 0cd716f98c15cf1fb11170da3e452e9e 180 PANTHER PTHR22573:SF56 4 180 6.7E-78 T 25-04-2016 APQ13_RS07605 0cd716f98c15cf1fb11170da3e452e9e 180 Pfam PF00156 Phosphoribosyl transferase domain 15 160 6.2E-23 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APQ13_RS07605 0cd716f98c15cf1fb11170da3e452e9e 180 PANTHER PTHR22573 4 180 6.7E-78 T 25-04-2016 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 112 122 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 185 41.822 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 7 186 3.4E-76 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 Gene3D G3DSA:3.30.1130.10 56 186 8.4E-60 T 25-04-2016 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 PANTHER PTHR11109 3 186 3.3E-102 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 Pfam PF01227 GTP cyclohydrolase I 7 184 2.3E-79 T 25-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 SUPERFAMILY SSF55620 3 186 3.78E-78 T 25-04-2016 APQ13_RS03375 74d24b65a0bb7087a3dac9ab6272d009 187 Gene3D G3DSA:1.10.286.10 3 51 1.5E-26 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 PANTHER PTHR32329 1014 1427 0.0 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 PANTHER PTHR32329 2 992 0.0 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 907 1244 2.9E-53 T 25-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 252 2.4E-37 T 25-04-2016 IPR008275 CoA enzyme activase APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 318 572 3.9E-32 T 25-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 252 9.2E-21 T 25-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 SUPERFAMILY SSF53067 2 252 3.04E-53 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 674 893 2.1E-75 T 25-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 PANTHER PTHR32329:SF4 1014 1427 0.0 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 PANTHER PTHR32329:SF4 2 992 0.0 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 SUPERFAMILY SSF53067 317 572 5.9E-51 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 Gene3D G3DSA:3.30.420.40 95 232 3.9E-45 T 25-04-2016 APQ13_RS05760 b195c683c57868f9e7f99c7bc9c3e2d8 1433 Gene3D G3DSA:3.30.420.40 412 554 5.2E-48 T 25-04-2016 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 Pfam PF00912 Transglycosylase 132 297 2.4E-58 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 138 678 4.4E-166 T 25-04-2016 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 PANTHER PTHR32282 57 673 8.0E-190 T 25-04-2016 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 PANTHER PTHR32282:SF5 57 673 8.0E-190 T 25-04-2016 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 SUPERFAMILY SSF56601 279 301 7.34E-98 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 SUPERFAMILY SSF56601 334 689 7.34E-98 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 Pfam PF00905 Penicillin binding protein transpeptidase domain 397 670 5.5E-38 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 Gene3D G3DSA:1.10.3810.10 128 299 1.6E-67 T 25-04-2016 APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 SUPERFAMILY SSF53955 116 318 2.08E-67 T 25-04-2016 IPR023346 Lysozyme-like domain APQ13_RS08785 1a904247c7a7a6ebd48db7041f69ba35 758 Gene3D G3DSA:3.40.710.10 300 716 6.6E-98 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 PANTHER PTHR20861 1 277 7.3E-85 T 25-04-2016 APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 Gene3D G3DSA:3.30.70.890 164 281 2.0E-29 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 SUPERFAMILY SSF54211 2 158 2.58E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 Pfam PF08544 GHMP kinases C terminal 199 273 7.6E-8 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 PANTHER PTHR20861:SF2 1 277 7.3E-85 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 Gene3D G3DSA:3.30.230.10 5 158 8.0E-50 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 34.04 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 282 2.1E-79 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 Pfam PF00288 GHMP kinases N terminal domain 86 141 4.2E-9 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 PIRSF PIRSF010376 1 282 3.1E-90 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APQ13_RS08575 1f86a2485761fe365a90e3917b9912e7 282 SUPERFAMILY SSF55060 164 280 8.63E-29 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 Gene3D G3DSA:1.10.1900.20 55 117 3.6E-31 T 25-04-2016 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 PANTHER PTHR10986:SF12 2 117 6.1E-64 T 25-04-2016 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 SUPERFAMILY SSF74731 3 116 4.97E-49 T 25-04-2016 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 Pfam PF00453 Ribosomal protein L20 3 108 1.4E-48 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.6E-50 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 3.0E-10 T 25-04-2016 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.191 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.95E-41 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.95E-41 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.95E-41 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS04555 0c999991ba9b8a4305d43ce892bf4e83 119 PANTHER PTHR10986 2 117 6.1E-64 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APQ13_RS08675 4a2ee44c6f30fce3da365a82a30e6623 220 PANTHER PTHR36435 1 219 1.9E-14 T 25-04-2016 APQ13_RS08675 4a2ee44c6f30fce3da365a82a30e6623 220 PANTHER PTHR36435:SF1 1 219 1.9E-14 T 25-04-2016 APQ13_RS08675 4a2ee44c6f30fce3da365a82a30e6623 220 Pfam PF02517 CAAX protease self-immunity 123 211 2.7E-16 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 Pfam PF00534 Glycosyl transferases group 1 287 418 6.4E-10 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.4E-175 T 25-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 Pfam PF08323 Starch synthase catalytic domain 2 236 2.6E-82 T 25-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 SUPERFAMILY SSF53756 2 475 4.08E-123 T 25-04-2016 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 Gene3D G3DSA:3.40.50.2000 250 456 5.5E-72 T 25-04-2016 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 45.075 T 25-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 PANTHER PTHR12526 1 475 1.9E-149 T 25-04-2016 APQ13_RS00880 63a79848267987ff485fb338bd8e02bc 476 PANTHER PTHR12526:SF17 1 475 1.9E-149 T 25-04-2016 APQ13_RS08285 f5948f820350eb365ccfa60b58dd2b9e 98 SUPERFAMILY SSF47413 2 51 5.0E-12 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08285 f5948f820350eb365ccfa60b58dd2b9e 98 SMART SM00354 1 64 3.0E-11 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS08285 f5948f820350eb365ccfa60b58dd2b9e 98 Gene3D G3DSA:1.10.260.40 1 51 6.3E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08285 f5948f820350eb365ccfa60b58dd2b9e 98 PANTHER PTHR30146:SF30 1 50 1.2E-13 T 25-04-2016 APQ13_RS08285 f5948f820350eb365ccfa60b58dd2b9e 98 PANTHER PTHR30146 1 50 1.2E-13 T 25-04-2016 APQ13_RS08285 f5948f820350eb365ccfa60b58dd2b9e 98 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 46 2.2E-14 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS04820 d245f79e9e1e9854fa5e836f6fb91bf5 93 SUPERFAMILY SSF54427 14 78 2.84E-8 T 25-04-2016 IPR032710 NTF2-like domain APQ13_RS04820 d245f79e9e1e9854fa5e836f6fb91bf5 93 Gene3D G3DSA:3.10.450.50 17 83 9.2E-5 T 25-04-2016 IPR032710 NTF2-like domain APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 Pfam PF00005 ABC transporter 24 166 3.9E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 SUPERFAMILY SSF52540 3 221 6.75E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 PANTHER PTHR24220 5 226 2.0E-96 T 25-04-2016 APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 Gene3D G3DSA:3.40.50.300 2 218 4.0E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 SMART SM00382 32 215 1.6E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 PANTHER PTHR24220:SF577 5 226 2.0E-96 T 25-04-2016 APQ13_RS01600 2f2999d3ff8e20e76f062d2e74cd5ca9 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 Pfam PF00005 ABC transporter 24 166 3.9E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 SUPERFAMILY SSF52540 3 221 6.75E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 PANTHER PTHR24220 5 226 2.0E-96 T 25-04-2016 APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 Gene3D G3DSA:3.40.50.300 2 218 4.0E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 SMART SM00382 32 215 1.6E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 PANTHER PTHR24220:SF577 5 226 2.0E-96 T 25-04-2016 APQ13_RS01645 2f2999d3ff8e20e76f062d2e74cd5ca9 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 PANTHER PTHR11632:SF59 3 467 7.9E-28 T 25-04-2016 APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 Pfam PF00890 FAD binding domain 8 460 2.2E-45 T 25-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 SUPERFAMILY SSF56425 277 431 1.88E-22 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 Gene3D G3DSA:3.50.50.60 2 241 3.7E-58 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 Gene3D G3DSA:3.50.50.60 427 493 3.7E-58 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 Gene3D G3DSA:3.90.700.10 278 419 2.1E-24 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 PANTHER PTHR11632 3 467 7.9E-28 T 25-04-2016 APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 SUPERFAMILY SSF51905 430 493 1.16E-41 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01420 18dc8b855f65fcd855d5c78f3f47544e 496 SUPERFAMILY SSF51905 3 259 1.16E-41 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 PANTHER PTHR30483:SF6 1 384 3.1E-93 T 25-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 62 78 1.5E-5 T 25-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 40 56 1.5E-5 T 25-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 PANTHER PTHR30483 1 384 3.1E-93 T 25-04-2016 APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 Pfam PF13458 Periplasmic binding protein 39 379 3.9E-61 T 25-04-2016 IPR028081 Leucine-binding protein domain APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 Gene3D G3DSA:3.40.50.2300 38 239 2.9E-57 T 25-04-2016 APQ13_RS00275 a0e196abc39428960e62cf6508301a20 390 SUPERFAMILY SSF53822 38 381 1.9E-84 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS08315 5a3f0c19682c4f2c7a62b4d09bf4fac2 901 Pfam PF13199 Glycosyl hydrolase family 66 161 782 2.0E-152 T 25-04-2016 IPR025092 Glycosyl hydrolase family 66 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 PANTHER PTHR39191:SF1 2 491 2.1E-186 T 25-04-2016 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 PANTHER PTHR39191 2 491 2.1E-186 T 25-04-2016 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 PIRSF PIRSF006005 1 491 7.6E-239 T 25-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 18 225 3.3E-40 T 25-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 491 275.92 T 25-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 240 435 1.1E-50 T 25-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 5 487 4.8E-226 T 25-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS03705 f391e670a2fe42766cb0f8e4e237cdca 491 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 253 270 - T 25-04-2016 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS07450 bb304733415005467cf48a8763be26a5 82 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 17.128 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APQ13_RS07450 bb304733415005467cf48a8763be26a5 82 SUPERFAMILY SSF47336 1 79 6.81E-21 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS07450 bb304733415005467cf48a8763be26a5 82 Pfam PF00550 Phosphopantetheine attachment site 8 75 1.9E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS07450 bb304733415005467cf48a8763be26a5 82 Gene3D G3DSA:1.10.1200.10 1 80 2.8E-24 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS07450 bb304733415005467cf48a8763be26a5 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 74 3.0E-15 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 SUPERFAMILY SSF52540 21 195 1.65E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 PANTHER PTHR11649 1 197 2.2E-54 T 25-04-2016 APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.1E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 193 1.2E-72 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 197 29.103 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 Gene3D G3DSA:3.40.50.300 11 195 1.4E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03450 5cfd4580972ada6ac7e47f09b6e418c2 197 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 28 188 2.6E-13 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 25-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 209 30.527 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 PANTHER PTHR10344 1 208 1.1E-67 T 25-04-2016 APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 Gene3D G3DSA:3.40.50.300 3 208 1.8E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 Pfam PF02223 Thymidylate kinase 9 198 5.6E-53 T 25-04-2016 APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 7.5E-59 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APQ13_RS00305 287983373e5454c8ba4ce7e6e35e091e 212 SUPERFAMILY SSF52540 1 208 2.34E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 Gene3D G3DSA:3.20.20.70 1 236 1.9E-81 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 6.8E-85 T 25-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.981 T 25-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 SUPERFAMILY SSF51366 1 237 7.38E-72 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 PANTHER PTHR21235 1 237 6.9E-97 T 25-04-2016 APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 Pfam PF00977 Histidine biosynthesis protein 2 229 2.3E-79 T 25-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APQ13_RS02010 dc88f5a6d8638cc65440151be7606696 239 PANTHER PTHR21235:SF15 1 237 6.9E-97 T 25-04-2016 APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.1E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.1E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 PANTHER PTHR30328 1 107 3.1E-17 T 25-04-2016 APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 Gene3D G3DSA:1.10.357.10 2 195 7.3E-29 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 SUPERFAMILY SSF46689 1 72 6.48E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 Pfam PF13305 WHG domain 86 170 5.6E-7 T 25-04-2016 IPR025996 WHG domain APQ13_RS01380 f3cc64be6c0a5510444d48322ded576d 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 53 3.7E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS07650 5eb8ec20ee66b4fbc23bf3e600031c5e 63 PANTHER PTHR38455 1 63 4.8E-25 T 25-04-2016 APQ13_RS07650 5eb8ec20ee66b4fbc23bf3e600031c5e 63 PANTHER PTHR38455:SF1 1 63 4.8E-25 T 25-04-2016 APQ13_RS07650 5eb8ec20ee66b4fbc23bf3e600031c5e 63 Pfam PF06107 Bacterial protein of unknown function (DUF951) 2 63 4.2E-27 T 25-04-2016 IPR009296 Protein of unknown function DUF951 APQ13_RS07650 5eb8ec20ee66b4fbc23bf3e600031c5e 63 PIRSF PIRSF037263 1 63 2.3E-30 T 25-04-2016 IPR009296 Protein of unknown function DUF951 APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 SUPERFAMILY SSF47413 3 66 9.73E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 SMART SM00530 6 61 7.6E-16 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 Pfam PF01381 Helix-turn-helix 7 61 1.2E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 Gene3D G3DSA:1.10.260.40 2 63 2.1E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 Pfam PF00717 Peptidase S24-like 144 203 7.3E-10 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 Gene3D G3DSA:2.10.109.10 138 225 2.8E-15 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APQ13_RS08390 ec5100446463ee3a761e13bfb1ef6c07 228 SUPERFAMILY SSF51306 107 223 8.89E-23 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 PIRSF PIRSF005520 1 135 1.0E-51 T 25-04-2016 IPR008226 Mini-ribonuclease 3 family APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 SMART SM00535 2 135 0.0086 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 Pfam PF00636 Ribonuclease III domain 15 112 1.0E-13 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 SUPERFAMILY SSF69065 6 130 8.72E-44 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 PANTHER PTHR34276 6 130 1.4E-52 T 25-04-2016 APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 Gene3D G3DSA:1.10.1520.10 3 133 2.7E-52 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APQ13_RS06975 da9c040938cebcfff39a63cf4b4a8e75 139 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 4 130 28.445 T 25-04-2016 IPR008226 Mini-ribonuclease 3 family APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 Gene3D G3DSA:2.30.40.10 360 375 1.7E-6 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 Gene3D G3DSA:2.30.40.10 44 62 1.7E-6 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 PIRSF PIRSF038994 33 392 8.9E-117 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 46 386 2.1E-89 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 SUPERFAMILY SSF51338 8 61 6.34E-9 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 SUPERFAMILY SSF51338 359 390 6.34E-9 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 SUPERFAMILY SSF51556 62 359 2.93E-98 T 25-04-2016 IPR032466 Metal-dependent hydrolase APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 PANTHER PTHR11113 1 390 5.4E-138 T 25-04-2016 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 Gene3D G3DSA:3.20.20.140 63 359 1.2E-102 T 25-04-2016 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 PANTHER PTHR11113:SF7 1 390 5.4E-138 T 25-04-2016 APQ13_RS05765 809a8c8e7f3b6eb6b12d3bcef6f8997a 392 Pfam PF01979 Amidohydrolase family 59 387 3.3E-20 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 348 53.072 T 25-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 Gene3D G3DSA:3.90.1150.10 249 347 2.0E-25 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 PANTHER PTHR11751 1 348 1.3E-83 T 25-04-2016 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 SUPERFAMILY SSF53383 17 347 3.94E-73 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 PANTHER PTHR11751:SF398 1 348 1.3E-83 T 25-04-2016 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 Pfam PF00155 Aminotransferase class I and II 21 344 2.5E-53 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 Gene3D G3DSA:3.40.640.10 35 248 5.5E-60 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS01970 0753cc29996da46f411a7a7422ee18f3 349 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 347 2.9E-92 T 25-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APQ13_RS05380 121d2636bdd634f8776d0773449601eb 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 53 1.1E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS05380 121d2636bdd634f8776d0773449601eb 188 PANTHER PTHR30055 3 171 1.4E-22 T 25-04-2016 APQ13_RS05380 121d2636bdd634f8776d0773449601eb 188 Gene3D G3DSA:1.10.357.10 3 171 2.7E-17 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS05380 121d2636bdd634f8776d0773449601eb 188 PANTHER PTHR30055:SF55 3 171 1.4E-22 T 25-04-2016 APQ13_RS05380 121d2636bdd634f8776d0773449601eb 188 SUPERFAMILY SSF46689 3 61 1.37E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 Gene3D G3DSA:1.10.10.10 3 85 6.6E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 PANTHER PTHR33154 4 84 1.9E-21 T 25-04-2016 APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 SUPERFAMILY SSF46785 3 83 4.73E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.5E-10 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.5E-10 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.5E-10 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 Pfam PF12840 Helix-turn-helix domain 5 62 8.9E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00385 e7b2f3f0359f167aba85f7d355d5be94 92 SMART SM00418 5 83 6.8E-24 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 203 447 1.5E-87 T 25-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 SMART SM00839 205 447 3.2E-91 T 25-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 Gene3D G3DSA:3.40.50.720 210 373 1.7E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PANTHER PTHR11606 6 449 4.7E-254 T 25-04-2016 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 4.5E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 4.5E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 4.5E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 194 216 4.5E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 Gene3D G3DSA:1.10.285.10 6 68 1.0E-29 T 25-04-2016 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 Gene3D G3DSA:1.10.285.10 374 449 3.2E-26 T 25-04-2016 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 2.6E-51 T 25-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 Gene3D G3DSA:3.40.192.10 69 189 4.6E-64 T 25-04-2016 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 SUPERFAMILY SSF51735 203 448 6.79E-75 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 SUPERFAMILY SSF53223 7 197 7.04E-75 T 25-04-2016 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PIRSF PIRSF000185 23 449 3.2E-122 T 25-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APQ13_RS03615 c61f9c480c286b02286767e13140e7b2 449 PANTHER PTHR11606:SF4 6 449 4.7E-254 T 25-04-2016 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 265 3.0E-81 T 25-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 Pfam PF00696 Amino acid kinase family 9 229 8.8E-35 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PANTHER PTHR11063 3 263 2.1E-65 T 25-04-2016 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 Gene3D G3DSA:3.40.1160.10 9 264 5.3E-50 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PANTHER PTHR11063:SF12 3 263 2.1E-65 T 25-04-2016 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 SUPERFAMILY SSF53633 9 265 2.09E-62 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 266 33.989 T 25-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 4.9E-47 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PRINTS PR00474 Glutamate 5-kinase family signature 156 183 4.9E-47 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PRINTS PR00474 Glutamate 5-kinase family signature 217 237 4.9E-47 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 4.9E-47 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 4.9E-47 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 PIRSF PIRSF000729 4 266 2.8E-82 T 25-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS05715 52d6a46b8141cc3b9456f5c0df15dc35 266 ProSitePatterns PS00902 Glutamate 5-kinase signature. 215 232 - T 25-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 5 538 7.4E-253 T 25-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 PANTHER PTHR10357 442 519 6.2E-266 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 PANTHER PTHR10357 5 412 6.2E-266 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 SMART SM00642 11 407 1.5E-123 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 523 5.0E-10 T 25-04-2016 IPR032091 Maltogenic Amylase, C-terminal APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 Gene3D G3DSA:3.20.20.80 167 464 2.6E-112 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 Gene3D G3DSA:3.20.20.80 6 101 2.6E-112 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 SUPERFAMILY SSF51445 6 463 1.53E-136 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 SUPERFAMILY SSF51011 466 539 5.66E-15 T 25-04-2016 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 PANTHER PTHR10357:SF170 442 519 6.2E-266 T 25-04-2016 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 PANTHER PTHR10357:SF170 5 412 6.2E-266 T 25-04-2016 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 Pfam PF00128 Alpha amylase, catalytic domain 26 365 2.4E-100 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 Gene3D G3DSA:3.90.400.10 102 163 4.5E-24 T 25-04-2016 APQ13_RS08340 b7ce91a668a637dffc3d0ee97b7672ab 542 Gene3D G3DSA:2.60.40.1180 467 539 6.6E-18 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta APQ13_RS04630 159ac1e5d286aebb1e9ad3f202998feb 61 SUPERFAMILY SSF52949 4 60 2.94E-13 T 25-04-2016 APQ13_RS04630 159ac1e5d286aebb1e9ad3f202998feb 61 Gene3D G3DSA:3.40.220.10 3 60 5.2E-15 T 25-04-2016 APQ13_RS04630 159ac1e5d286aebb1e9ad3f202998feb 61 PANTHER PTHR11106 4 60 9.3E-16 T 25-04-2016 APQ13_RS04630 159ac1e5d286aebb1e9ad3f202998feb 61 Pfam PF01661 Macro domain 4 59 2.1E-13 T 25-04-2016 IPR002589 Macro domain APQ13_RS00030 c80a4b6b117f1e1eeec950fd964fb08d 167 Pfam PF01966 HD domain 37 115 5.2E-5 T 25-04-2016 IPR006674 HD domain APQ13_RS00030 c80a4b6b117f1e1eeec950fd964fb08d 167 SUPERFAMILY SSF109604 17 146 8.64E-21 T 25-04-2016 APQ13_RS00030 c80a4b6b117f1e1eeec950fd964fb08d 167 Gene3D G3DSA:1.10.3210.10 14 142 7.2E-27 T 25-04-2016 IPR006674 HD domain APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 326 4.6E-115 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Gene3D G3DSA:1.10.10.350 382 481 7.5E-18 T 25-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 SUPERFAMILY SSF48163 320 481 3.27E-42 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Gene3D G3DSA:3.90.800.10 70 197 1.3E-33 T 25-04-2016 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 SUPERFAMILY SSF52374 4 319 2.63E-105 T 25-04-2016 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PANTHER PTHR11451 3 247 3.2E-101 T 25-04-2016 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PANTHER PTHR11451 263 336 3.2E-101 T 25-04-2016 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PANTHER PTHR11451:SF41 3 247 3.2E-101 T 25-04-2016 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PANTHER PTHR11451:SF41 263 336 3.2E-101 T 25-04-2016 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 482 5.8E-173 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Gene3D G3DSA:3.40.50.620 198 247 6.1E-52 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Gene3D G3DSA:3.40.50.620 4 69 6.1E-52 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Gene3D G3DSA:1.10.1160.10 251 335 2.4E-35 T 25-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 5.5E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 5.5E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 220 5.5E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 5.5E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 206 5.5E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APQ13_RS06260 96f99c8602dbb7cb121b843cd3454d1f 485 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 481 34.223 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 Pfam PF04282 Family of unknown function (DUF438) 9 76 3.3E-23 T 25-04-2016 IPR007380 Domain of unknown function DUF438 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 Gene3D G3DSA:1.20.120.520 314 337 5.4E-70 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 Gene3D G3DSA:1.20.120.520 82 263 5.4E-70 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 PANTHER PTHR24423 327 454 5.7E-56 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 PANTHER PTHR24423 1 211 5.7E-56 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 SUPERFAMILY SSF55785 327 435 7.33E-6 T 25-04-2016 IPR000014 PAS domain APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 Pfam PF01814 Hemerythrin HHE cation binding domain 88 222 4.5E-24 T 25-04-2016 IPR012312 Haemerythrin-like APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 PANTHER PTHR24423:SF516 327 454 5.7E-56 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 PANTHER PTHR24423:SF516 1 211 5.7E-56 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 Gene3D G3DSA:3.30.450.20 338 435 5.7E-8 T 25-04-2016 APQ13_RS02565 4c9bc5be3ebd440b7c1a2fd82d523ab4 454 Pfam PF13596 PAS domain 332 441 1.6E-28 T 25-04-2016 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 25-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 SUPERFAMILY SSF46785 3 136 7.06E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 SMART SM00347 24 124 9.6E-19 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 Gene3D G3DSA:1.10.10.10 8 136 3.4E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 PANTHER PTHR33164 3 136 9.7E-22 T 25-04-2016 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 Pfam PF01047 MarR family 34 88 6.4E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.5E-11 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.5E-11 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.5E-11 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS08705 c907ee61d7b3274250b4604421599236 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.5E-11 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 SMART SM00382 33 218 4.1E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 SUPERFAMILY SSF52540 5 232 1.11E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 PANTHER PTHR24220:SF435 7 253 2.7E-104 T 25-04-2016 APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 PANTHER PTHR24220 7 253 2.7E-104 T 25-04-2016 APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 Pfam PF00005 ABC transporter 24 170 5.7E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 274 5.1E-115 T 25-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 APQ13_RS07750 4d3101b534c297c8558eaaf488343ff8 280 Gene3D G3DSA:3.40.50.300 4 232 4.2E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Pfam PF00270 DEAD/DEAH box helicase 617 775 6.8E-19 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SUPERFAMILY SSF141259 481 559 3.92E-24 T 25-04-2016 IPR003711 CarD-like/TRCF domain APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1122 28.815 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Pfam PF03461 TRCF domain 1016 1101 2.5E-25 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SUPERFAMILY SSF52540 793 999 1.92E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Gene3D G3DSA:3.30.2060.10 143 221 4.9E-18 T 25-04-2016 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 PANTHER PTHR14025 400 1152 0.0 T 25-04-2016 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Pfam PF02559 CarD-like/TRCF domain 491 586 2.3E-26 T 25-04-2016 IPR003711 CarD-like/TRCF domain APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 PANTHER PTHR14025:SF21 400 1152 0.0 T 25-04-2016 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SUPERFAMILY SSF52540 18 362 3.89E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SMART SM00982 1015 1115 1.0E-34 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SUPERFAMILY SSF143517 1004 1159 7.06E-34 T 25-04-2016 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SMART SM01058 490 587 3.8E-44 T 25-04-2016 IPR003711 CarD-like/TRCF domain APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Gene3D G3DSA:3.40.50.300 599 797 3.8E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SUPERFAMILY SSF52540 371 478 4.87E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SMART SM00487 611 801 1.7E-35 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SUPERFAMILY SSF52540 536 794 6.04E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Pfam PF00271 Helicase conserved C-terminal domain 817 920 1.2E-15 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 SMART SM00490 837 921 3.4E-16 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 159 1088 0.0 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APQ13_RS07635 b123024c044eefa92f47c40c3662f6d7 1165 Gene3D G3DSA:3.40.50.300 808 967 8.2E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 PANTHER PTHR19376 2 541 0.0 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 PANTHER PTHR19376 1120 1180 0.0 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1125 5.5E-63 T 25-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1184 0.0 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 475 2.4E-37 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Gene3D G3DSA:2.40.50.100 973 1029 5.0E-8 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 SUPERFAMILY SSF64484 5 1184 0.0 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Pfam PF05000 RNA polymerase Rpb1, domain 4 695 760 4.4E-13 T 25-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 PANTHER PTHR19376:SF32 1120 1180 0.0 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 PANTHER PTHR19376 559 1079 0.0 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Gene3D G3DSA:2.40.40.20 407 477 2.9E-37 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Gene3D G3DSA:2.40.40.20 339 366 2.9E-37 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1193 10.247 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 SMART SM00663 225 504 1.4E-175 T 25-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 664 1.0E-33 T 25-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 332 4.4E-87 T 25-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 PANTHER PTHR19376:SF32 2 541 0.0 T 25-04-2016 APQ13_RS08610 0024ddd523e422c997460a04570f47a4 1209 PANTHER PTHR19376:SF32 559 1079 0.0 T 25-04-2016 APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 Pfam PF01136 Peptidase family U32 85 311 4.2E-86 T 25-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 SUPERFAMILY SSF51412 17 152 2.29E-5 T 25-04-2016 APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 PANTHER PTHR30217:SF6 1 428 4.6E-216 T 25-04-2016 APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 Gene3D G3DSA:3.20.20.70 12 114 3.4E-5 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 Pfam PF16325 Peptidase family U32 C-terminal domain 326 407 1.5E-20 T 25-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 PANTHER PTHR30217 1 428 4.6E-216 T 25-04-2016 APQ13_RS04300 6b3ea403744b48234c1cc9cdae7a629e 428 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 25-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 PANTHER PTHR26402:SF518 2 222 1.4E-105 T 25-04-2016 APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 PANTHER PTHR26402 2 222 1.4E-105 T 25-04-2016 APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 SMART SM00448 2 112 1.7E-34 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 SUPERFAMILY SSF52172 1 176 6.49E-36 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 4.1E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 SMART SM00862 145 220 1.1E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 Gene3D G3DSA:1.10.10.10 124 221 6.0E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 Gene3D G3DSA:3.40.50.2300 2 121 1.4E-33 T 25-04-2016 APQ13_RS02665 66b0afbc8831e591c6b9394e50a2d537 224 Pfam PF00072 Response regulator receiver domain 5 112 6.3E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 191 208 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 54 72 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 217 235 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 73 92 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 262 280 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 29 50 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 283 301 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 133 152 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00691 Adhesin B signature 240 257 2.4E-96 T 25-04-2016 IPR006129 Adhesin B GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 Gene3D G3DSA:3.40.50.1980 19 183 4.2E-52 T 25-04-2016 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00690 Adhesin family signature 73 90 7.7E-58 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00690 Adhesin family signature 29 47 7.7E-58 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00690 Adhesin family signature 60 73 7.7E-58 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00690 Adhesin family signature 270 289 7.7E-58 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00690 Adhesin family signature 244 262 7.7E-58 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PRINTS PR00690 Adhesin family signature 191 212 7.7E-58 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PANTHER PTHR30477 4 268 2.8E-120 T 25-04-2016 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 Gene3D G3DSA:3.40.50.1980 184 305 5.0E-42 T 25-04-2016 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 SUPERFAMILY SSF53807 14 305 1.13E-85 T 25-04-2016 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 PANTHER PTHR30477:SF12 4 268 2.8E-120 T 25-04-2016 APQ13_RS06865 019ea187175d4ed7f8547b0bf7ade4eb 306 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 302 5.5E-73 T 25-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APQ13_RS00485 5b494a0954294fc1f50a486e3f8f81d5 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.954 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APQ13_RS00485 5b494a0954294fc1f50a486e3f8f81d5 185 PANTHER PTHR20982 1 185 2.3E-80 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APQ13_RS00485 5b494a0954294fc1f50a486e3f8f81d5 185 Gene3D G3DSA:1.10.132.20 66 185 5.9E-43 T 25-04-2016 IPR023584 Ribosome recycling factor domain APQ13_RS00485 5b494a0954294fc1f50a486e3f8f81d5 185 Pfam PF01765 Ribosome recycling factor 21 183 1.6E-63 T 25-04-2016 IPR023584 Ribosome recycling factor domain APQ13_RS00485 5b494a0954294fc1f50a486e3f8f81d5 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 3.0E-71 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APQ13_RS00485 5b494a0954294fc1f50a486e3f8f81d5 185 SUPERFAMILY SSF55194 1 185 2.49E-68 T 25-04-2016 IPR023584 Ribosome recycling factor domain APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 176 1.5E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 Gene3D G3DSA:3.40.50.1000 1 21 3.5E-29 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 Gene3D G3DSA:3.40.50.1000 78 195 3.5E-29 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 PANTHER PTHR18901 1 180 3.8E-30 T 25-04-2016 APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 7.1E-28 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 PANTHER PTHR18901:SF14 1 180 3.8E-30 T 25-04-2016 APQ13_RS04800 1962cf3fc91d3bc4a6ee112435357a15 205 SUPERFAMILY SSF56784 5 197 3.39E-39 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 350 5.1E-140 T 25-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 352 4.6E-8 T 25-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 1.7E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 1.7E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 Gene3D G3DSA:1.20.272.10 248 350 3.7E-8 T 25-04-2016 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 PANTHER PTHR11669:SF0 1 504 2.4E-175 T 25-04-2016 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 PANTHER PTHR11669 1 504 2.4E-175 T 25-04-2016 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 Gene3D G3DSA:1.10.8.60 165 242 1.5E-30 T 25-04-2016 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 SUPERFAMILY SSF48019 248 351 2.47E-12 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 SMART SM00382 36 176 2.9E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 SUPERFAMILY SSF52540 32 224 6.74E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.7E-43 T 25-04-2016 APQ13_RS00680 0a0cf78b3613351498875b70f0bdd5fb 558 Gene3D G3DSA:3.40.50.300 2 164 3.5E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04315 afd0616f0dc84d9ce2080052e6dc36ca 151 Pfam PF12732 YtxH-like protein 5 78 6.9E-13 T 25-04-2016 IPR024623 Uncharacterised protein family YtxH APQ13_RS01620 e18d317a67191c446fb6b98da5d5413f 96 SUPERFAMILY SSF46689 1 91 6.72E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS04465 4eaff1eed6ce50abd084820a44d98208 292 Pfam PF01925 Sulfite exporter TauE/SafE 12 151 5.0E-8 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APQ13_RS04465 4eaff1eed6ce50abd084820a44d98208 292 PANTHER PTHR30269 35 292 4.1E-13 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 9.8E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 9.8E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 9.8E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.8E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.8E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 Gene3D G3DSA:3.40.50.720 1 224 1.7E-56 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PANTHER PTHR24322:SF509 147 179 4.6E-60 T 25-04-2016 APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PANTHER PTHR24322:SF509 8 131 4.6E-60 T 25-04-2016 APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.8E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.8E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.8E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PANTHER PTHR24322 147 179 4.6E-60 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 PANTHER PTHR24322 8 131 4.6E-60 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 Pfam PF00106 short chain dehydrogenase 5 188 2.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS01140 6801f9c81d013b286f146c4bbc9447d8 254 SUPERFAMILY SSF51735 2 249 9.25E-55 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 Gene3D G3DSA:3.30.70.890 150 280 6.1E-37 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PANTHER PTHR20861 1 288 9.6E-86 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 Hamap MF_00384 Homoserine kinase [thrB]. 1 285 31.641 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 SUPERFAMILY SSF55060 154 263 5.22E-32 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 SUPERFAMILY SSF54211 1 142 1.29E-29 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 77 88 - T 25-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PRINTS PR00958 Homoserine kinase signature 236 251 1.1E-39 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PRINTS PR00958 Homoserine kinase signature 156 173 1.1E-39 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PRINTS PR00958 Homoserine kinase signature 118 131 1.1E-39 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PRINTS PR00958 Homoserine kinase signature 8 23 1.1E-39 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PRINTS PR00958 Homoserine kinase signature 84 99 1.1E-39 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PANTHER PTHR20861:SF1 1 288 9.6E-86 T 25-04-2016 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 TIGRFAM TIGR00191 thrB: homoserine kinase 1 287 4.2E-73 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 Pfam PF08544 GHMP kinases C terminal 193 264 2.6E-10 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 Gene3D G3DSA:3.30.230.10 1 142 3.6E-44 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 Pfam PF00288 GHMP kinases N terminal domain 71 131 4.5E-13 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APQ13_RS03385 b6676f8d387cb4327be0a39be1d65c8a 288 PIRSF PIRSF000676 1 288 1.6E-85 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 PANTHER PTHR39340:SF1 1 326 4.0E-126 T 25-04-2016 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 SUPERFAMILY SSF51569 7 322 1.46E-68 T 25-04-2016 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 Gene3D G3DSA:3.20.20.70 5 328 3.1E-132 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 329 207.134 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 SMART SM01133 21 283 1.9E-26 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 3 326 1.0E-180 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 Pfam PF01791 DeoC/LacD family aldolase 21 282 2.3E-71 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APQ13_RS07140 7962f8e4ecd29366b052c2ed4aa7d304 329 PANTHER PTHR39340 1 326 4.0E-126 T 25-04-2016 APQ13_RS02570 0a1faa3bb2600f05a969fff33efb695b 242 Pfam PF12730 ABC-2 family transporter protein 4 179 1.4E-16 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APQ13_RS08020 bcdbbd249de53c167cc40a85173a7b3d 186 Gene3D G3DSA:1.10.340.30 1 182 7.5E-79 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APQ13_RS08020 bcdbbd249de53c167cc40a85173a7b3d 186 Pfam PF03352 Methyladenine glycosylase 6 182 2.5E-75 T 25-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APQ13_RS08020 bcdbbd249de53c167cc40a85173a7b3d 186 SUPERFAMILY SSF48150 2 184 4.63E-76 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APQ13_RS08020 bcdbbd249de53c167cc40a85173a7b3d 186 PANTHER PTHR30037:SF4 1 185 2.0E-95 T 25-04-2016 APQ13_RS08020 bcdbbd249de53c167cc40a85173a7b3d 186 PANTHER PTHR30037 1 185 2.0E-95 T 25-04-2016 APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 PANTHER PTHR23407:SF1 1 173 2.1E-37 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 174 3.9E-45 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 Gene3D G3DSA:3.40.50.10420 2 174 2.8E-42 T 25-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 PIRSF PIRSF006806 1 178 1.0E-37 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 173 2.9E-45 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 PANTHER PTHR23407 1 173 2.1E-37 T 25-04-2016 APQ13_RS06305 ffa56a4f7302fdb2d53dc7e2c9dd3b56 178 SUPERFAMILY SSF100950 1 174 7.39E-42 T 25-04-2016 APQ13_RS03535 73c09fcc4b74100644f011d6ff5034c0 335 Gene3D G3DSA:3.20.20.210 5 333 1.3E-29 T 25-04-2016 APQ13_RS03535 73c09fcc4b74100644f011d6ff5034c0 335 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 83 333 9.3E-13 T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APQ13_RS03535 73c09fcc4b74100644f011d6ff5034c0 335 SUPERFAMILY SSF51726 4 333 4.84E-41 T 25-04-2016 APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 PIRSF PIRSF015601 1 246 2.6E-48 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 Gene3D G3DSA:3.40.1280.10 1 244 1.7E-66 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 PANTHER PTHR30027:SF3 1 247 2.4E-72 T 25-04-2016 APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 Pfam PF04452 RNA methyltransferase 14 241 2.3E-67 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 SUPERFAMILY SSF75217 68 244 4.36E-49 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 244 5.6E-51 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 PANTHER PTHR30027 1 247 2.4E-72 T 25-04-2016 APQ13_RS08280 29fdc5c14ed0440d403601e26e5bd866 247 SUPERFAMILY SSF88697 2 61 1.02E-10 T 25-04-2016 IPR015947 PUA-like domain APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 PRINTS PR01249 Ribosomal protein L31 signature 44 59 2.0E-20 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 PRINTS PR01249 Ribosomal protein L31 signature 59 77 2.0E-20 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-20 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 SUPERFAMILY SSF143800 1 79 1.1E-24 T 25-04-2016 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 Pfam PF01197 Ribosomal protein L31 1 78 1.3E-29 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 PANTHER PTHR33280 1 79 1.4E-35 T 25-04-2016 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.275 T 25-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS01860 845c71d1d553d56a5d1cb68374e570b7 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 4.7E-20 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02710 cf0b41142a602796361963022f62098d 510 Pfam PF00005 ABC transporter 22 170 2.7E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02710 cf0b41142a602796361963022f62098d 510 Pfam PF00005 ABC transporter 275 430 7.7E-17 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02710 cf0b41142a602796361963022f62098d 510 Gene3D G3DSA:3.40.50.300 253 494 3.2E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02710 cf0b41142a602796361963022f62098d 510 Gene3D G3DSA:3.40.50.300 3 233 4.1E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02710 cf0b41142a602796361963022f62098d 510 SUPERFAMILY SSF52540 256 489 1.51E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02710 cf0b41142a602796361963022f62098d 510 PANTHER PTHR24220:SF239 7 383 6.1E-192 T 25-04-2016 APQ13_RS02710 cf0b41142a602796361963022f62098d 510 PANTHER PTHR24220 7 383 6.1E-192 T 25-04-2016 APQ13_RS02710 cf0b41142a602796361963022f62098d 510 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02710 cf0b41142a602796361963022f62098d 510 SUPERFAMILY SSF52540 4 226 3.26E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02710 cf0b41142a602796361963022f62098d 510 SMART SM00382 30 218 1.6E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00045 2452b73a476cca44c535b35bc1e5b33b 82 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 69 1.8E-30 T 25-04-2016 IPR005359 Protein with unknown function UPF0154 APQ13_RS00045 2452b73a476cca44c535b35bc1e5b33b 82 Hamap MF_00363 UPF0154 protein . 2 72 23.802 T 25-04-2016 IPR005359 Protein with unknown function UPF0154 APQ13_RS00045 2452b73a476cca44c535b35bc1e5b33b 82 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 62 2.0E-20 T 25-04-2016 IPR005359 Protein with unknown function UPF0154 APQ13_RS00045 2452b73a476cca44c535b35bc1e5b33b 82 PANTHER PTHR41297 2 81 5.5E-30 T 25-04-2016 APQ13_RS08885 838d8177282c785a99c639ae601c04f3 870 Pfam PF02687 FtsX-like permease family 356 476 5.5E-16 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS08885 838d8177282c785a99c639ae601c04f3 870 Pfam PF02687 FtsX-like permease family 744 861 1.9E-15 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS08885 838d8177282c785a99c639ae601c04f3 870 PANTHER PTHR30287 328 870 9.9E-42 T 25-04-2016 APQ13_RS08885 838d8177282c785a99c639ae601c04f3 870 PANTHER PTHR30287 1 233 9.9E-42 T 25-04-2016 APQ13_RS08885 838d8177282c785a99c639ae601c04f3 870 Pfam PF12704 MacB-like periplasmic core domain 523 714 1.3E-6 T 25-04-2016 IPR025857 MacB-like periplasmic core domain APQ13_RS08885 838d8177282c785a99c639ae601c04f3 870 Pfam PF12704 MacB-like periplasmic core domain 24 188 2.6E-6 T 25-04-2016 IPR025857 MacB-like periplasmic core domain APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 PIRSF PIRSF029928 1 104 5.4E-36 T 25-04-2016 IPR016940 ComG operon protein C GO:0030420 APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 Gene3D G3DSA:3.30.700.10 12 73 1.3E-4 T 25-04-2016 APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 SUPERFAMILY SSF54523 12 93 4.79E-14 T 25-04-2016 APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 30 2.1E-6 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 1.1E-8 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 1.1E-8 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APQ13_RS08630 dfe1b7bf8007806baa047e38f65165bb 104 Pfam PF13633 Prokaryotic N-terminal methylation site 10 34 1.5E-7 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 PANTHER PTHR11476:SF5 1 316 1.7E-59 T 25-04-2016 APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 PIRSF PIRSF001549 1 320 1.6E-55 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 Pfam PF13393 Histidyl-tRNA synthetase 9 310 2.0E-60 T 25-04-2016 APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 320 31.817 T 25-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 PANTHER PTHR11476 1 316 1.7E-59 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 Gene3D G3DSA:3.30.930.10 20 311 1.6E-61 T 25-04-2016 APQ13_RS01975 d0331cf966593e27b9533e645c610fa5 320 SUPERFAMILY SSF55681 6 316 1.19E-57 T 25-04-2016 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 SMART SM00937 35 153 3.5E-50 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 Gene3D G3DSA:1.20.58.410 1 73 1.1E-12 T 25-04-2016 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 323 5.0E-140 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 Gene3D G3DSA:3.30.160.20 186 264 1.0E-31 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 Pfam PF03462 PCRF domain 1 178 9.5E-56 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 SUPERFAMILY SSF75620 1 324 4.05E-125 T 25-04-2016 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 PANTHER PTHR11075:SF6 1 325 7.3E-146 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 PANTHER PTHR11075 1 325 7.3E-146 T 25-04-2016 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 203 219 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APQ13_RS01735 272580f91264dea7d02f1755b0adf51e 325 Pfam PF00472 RF-1 domain 187 296 9.9E-38 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 3.1E-28 T 25-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 269 7.8E-123 T 25-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 PANTHER PTHR11776:SF9 48 263 8.3E-110 T 25-04-2016 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 73 3.0E-30 T 25-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 Gene3D G3DSA:3.40.50.2020 84 262 1.5E-53 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 SUPERFAMILY SSF46785 2 73 2.11E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 PANTHER PTHR11776 48 263 8.3E-110 T 25-04-2016 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 Gene3D G3DSA:1.10.10.10 1 73 3.1E-35 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 Pfam PF00156 Phosphoribosyl transferase domain 107 263 2.8E-24 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APQ13_RS06125 1bad5f18a2b068e48893a8b955cf9965 271 SUPERFAMILY SSF53271 85 247 2.27E-35 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS01745 e29dfe32705819d0ad156da1bcb83f80 311 PIRSF PIRSF003097 1 311 7.5E-77 T 25-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APQ13_RS01745 e29dfe32705819d0ad156da1bcb83f80 311 PANTHER PTHR30489 12 68 5.0E-32 T 25-04-2016 APQ13_RS01745 e29dfe32705819d0ad156da1bcb83f80 311 PANTHER PTHR30489 86 311 5.0E-32 T 25-04-2016 APQ13_RS01745 e29dfe32705819d0ad156da1bcb83f80 311 Pfam PF02687 FtsX-like permease family 193 311 6.0E-13 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS07275 ce9714087894b68960401197dac29624 445 Pfam PF05167 Uncharacterised ACR (DUF711) 12 409 1.8E-168 T 25-04-2016 IPR007841 Uncharacterised protein family UPF0210 APQ13_RS07275 ce9714087894b68960401197dac29624 445 PANTHER PTHR37560 1 445 6.7E-243 T 25-04-2016 APQ13_RS07275 ce9714087894b68960401197dac29624 445 SUPERFAMILY SSF51998 2 440 1.74E-176 T 25-04-2016 APQ13_RS07275 ce9714087894b68960401197dac29624 445 Gene3D G3DSA:3.20.70.20 1 445 3.7E-215 T 25-04-2016 APQ13_RS07275 ce9714087894b68960401197dac29624 445 Hamap MF_01221 UPF0210 protein . 1 445 51.707 T 25-04-2016 IPR007841 Uncharacterised protein family UPF0210 APQ13_RS07275 ce9714087894b68960401197dac29624 445 PANTHER PTHR37560:SF2 1 445 6.7E-243 T 25-04-2016 APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 Gene3D G3DSA:3.40.50.720 153 207 8.7E-8 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 Gene3D G3DSA:3.90.180.10 1 152 3.6E-40 T 25-04-2016 IPR011032 GroES-like APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 SMART SM00829 10 292 4.6E-9 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 SUPERFAMILY SSF50129 1 134 2.99E-29 T 25-04-2016 IPR011032 GroES-like APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 PANTHER PTHR11695 16 294 2.0E-51 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 SUPERFAMILY SSF51735 112 268 1.95E-17 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 4.6E-6 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APQ13_RS04435 1d1111de0d18a8e4f3f79c0413eb352a 294 Pfam PF13602 Zinc-binding dehydrogenase 195 291 6.6E-11 T 25-04-2016 APQ13_RS04335 fb179447f151c757217920d29dd0ae6c 99 Pfam PF04024 PspC domain 6 60 2.1E-12 T 25-04-2016 IPR007168 Phage shock protein, PspC, N-terminal APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 Pfam PF01895 PhoU domain 121 206 6.8E-18 T 25-04-2016 IPR026022 PhoU domain APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 Pfam PF01895 PhoU domain 19 104 6.5E-23 T 25-04-2016 IPR026022 PhoU domain APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 PANTHER PTHR10010:SF14 1 216 1.1E-55 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 PIRSF PIRSF003107 1 217 1.1E-62 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 Gene3D G3DSA:1.20.58.220 3 110 1.4E-35 T 25-04-2016 APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 PANTHER PTHR10010 1 216 1.1E-55 T 25-04-2016 APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 215 3.2E-74 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 SUPERFAMILY SSF109755 3 216 3.24E-62 T 25-04-2016 APQ13_RS02650 740b2a19c413f29431572a99b8902d86 217 Gene3D G3DSA:1.20.58.220 111 216 2.4E-28 T 25-04-2016 APQ13_RS01750 21ceefe6734d98625559ded3f51f3fde 212 SUPERFAMILY SSF56281 12 211 4.59E-49 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01750 21ceefe6734d98625559ded3f51f3fde 212 PANTHER PTHR11935 13 212 2.2E-54 T 25-04-2016 APQ13_RS01750 21ceefe6734d98625559ded3f51f3fde 212 Pfam PF00753 Metallo-beta-lactamase superfamily 14 182 4.7E-27 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01750 21ceefe6734d98625559ded3f51f3fde 212 SMART SM00849 12 194 1.5E-32 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01750 21ceefe6734d98625559ded3f51f3fde 212 PANTHER PTHR11935:SF8 13 212 2.2E-54 T 25-04-2016 APQ13_RS01750 21ceefe6734d98625559ded3f51f3fde 212 Gene3D G3DSA:3.60.15.10 12 210 1.6E-46 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS02455 b45553dcc7cf89593589ba1ada12e9c3 209 Pfam PF00005 ABC transporter 18 162 1.0E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02455 b45553dcc7cf89593589ba1ada12e9c3 209 SUPERFAMILY SSF52540 1 207 1.33E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02455 b45553dcc7cf89593589ba1ada12e9c3 209 Gene3D G3DSA:3.40.50.300 1 205 8.2E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02455 b45553dcc7cf89593589ba1ada12e9c3 209 SMART SM00382 26 200 1.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02455 b45553dcc7cf89593589ba1ada12e9c3 209 PANTHER PTHR24220 3 204 1.4E-83 T 25-04-2016 APQ13_RS02455 b45553dcc7cf89593589ba1ada12e9c3 209 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS04215 fdf39258ad8794630ea84bc54b8efc8a 385 SUPERFAMILY SSF53335 76 366 2.78E-60 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04215 fdf39258ad8794630ea84bc54b8efc8a 385 PANTHER PTHR11061:SF15 38 384 2.9E-105 T 25-04-2016 APQ13_RS04215 fdf39258ad8794630ea84bc54b8efc8a 385 Gene3D G3DSA:3.40.50.150 111 384 5.9E-64 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04215 fdf39258ad8794630ea84bc54b8efc8a 385 SUPERFAMILY SSF88697 1 67 5.72E-18 T 25-04-2016 IPR015947 PUA-like domain APQ13_RS04215 fdf39258ad8794630ea84bc54b8efc8a 385 PANTHER PTHR11061 38 384 2.9E-105 T 25-04-2016 APQ13_RS04215 fdf39258ad8794630ea84bc54b8efc8a 385 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 160 341 3.3E-30 T 25-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APQ13_RS06910 ef013a0139164e7327257c6a21412a3c 110 Gene3D G3DSA:2.30.30.110 2 107 2.8E-29 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APQ13_RS06910 ef013a0139164e7327257c6a21412a3c 110 PANTHER PTHR33988:SF3 1 108 6.9E-19 T 25-04-2016 APQ13_RS06910 ef013a0139164e7327257c6a21412a3c 110 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 107 4.3E-19 T 25-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 APQ13_RS06910 ef013a0139164e7327257c6a21412a3c 110 PANTHER PTHR33988 1 108 6.9E-19 T 25-04-2016 APQ13_RS06910 ef013a0139164e7327257c6a21412a3c 110 SUPERFAMILY SSF50118 2 107 4.36E-27 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 ProSitePatterns PS00935 Glyoxalase I signature 2. 68 80 - T 25-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 3.3E-39 T 25-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 PANTHER PTHR10374:SF8 1 126 7.5E-45 T 25-04-2016 APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 121 1.3E-16 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 SUPERFAMILY SSF54593 1 126 2.15E-32 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 PANTHER PTHR10374 1 126 7.5E-45 T 25-04-2016 APQ13_RS00575 16e29893330c2163982ecfbce63d7b82 130 Gene3D G3DSA:3.10.180.10 1 125 1.3E-36 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 PANTHER PTHR18901 2 213 1.3E-77 T 25-04-2016 APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 SUPERFAMILY SSF56784 1 213 2.84E-57 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 85 176 2.9E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 8.6E-33 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 Gene3D G3DSA:1.10.150.240 17 74 3.7E-24 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 Gene3D G3DSA:3.40.50.1000 75 213 1.1E-42 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02105 908ce3e605a249b16986aa17ef04c235 214 PANTHER PTHR18901:SF23 2 213 1.3E-77 T 25-04-2016 APQ13_RS08480 5d612c61bfcdd004d894a5848d6dff3b 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 10 121 3.4E-45 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08480 5d612c61bfcdd004d894a5848d6dff3b 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 121 1.8E-48 T 25-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08480 5d612c61bfcdd004d894a5848d6dff3b 121 PANTHER PTHR12899 14 121 6.2E-44 T 25-04-2016 APQ13_RS08480 5d612c61bfcdd004d894a5848d6dff3b 121 SUPERFAMILY SSF53137 10 119 3.74E-53 T 25-04-2016 APQ13_RS08480 5d612c61bfcdd004d894a5848d6dff3b 121 Gene3D G3DSA:3.30.420.100 27 121 1.2E-39 T 25-04-2016 APQ13_RS08480 5d612c61bfcdd004d894a5848d6dff3b 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 121 29.459 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.5E-9 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.5E-9 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 Gene3D G3DSA:1.10.10.60 4 42 1.1E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 Gene3D G3DSA:1.10.10.60 43 69 3.7E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 PANTHER PTHR30055 2 141 8.0E-18 T 25-04-2016 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 SUPERFAMILY SSF46689 5 77 3.18E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS09315 d87de2795d1e29c5ee2cc8d838f6bc2b 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 9.2E-16 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS01585 6ba427a12e13192fd768d9a7401107e6 106 Gene3D G3DSA:1.10.10.60 13 100 1.1E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01585 6ba427a12e13192fd768d9a7401107e6 106 SUPERFAMILY SSF46689 7 103 1.97E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS00730 71b058fc66f0ee59e490fce8cec96435 278 PANTHER PTHR32243 1 278 8.6E-83 T 25-04-2016 APQ13_RS00730 71b058fc66f0ee59e490fce8cec96435 278 SUPERFAMILY SSF161098 4 278 3.74E-62 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00730 71b058fc66f0ee59e490fce8cec96435 278 Gene3D G3DSA:1.10.3720.10 2 266 1.7E-59 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00730 71b058fc66f0ee59e490fce8cec96435 278 PANTHER PTHR32243:SF4 1 278 8.6E-83 T 25-04-2016 APQ13_RS00730 71b058fc66f0ee59e490fce8cec96435 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 270 6.4E-15 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 SUPERFAMILY SSF46946 2 112 7.65E-44 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 Gene3D G3DSA:1.10.8.50 1 71 5.8E-29 T 25-04-2016 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 Pfam PF00416 Ribosomal protein S13/S18 62 108 3.1E-18 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 PANTHER PTHR10871 1 121 2.2E-69 T 25-04-2016 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 25-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 PIRSF PIRSF002134 1 121 1.1E-42 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 Gene3D G3DSA:4.10.910.10 72 121 1.7E-27 T 25-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 113 2.2E-51 T 25-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08520 c40abc2f714a1788796fb7ee9f3ad742 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.139 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 235 250 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 286 306 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 402 424 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 513 529 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 538 554 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 352 367 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 324 338 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 460 475 2.7E-65 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 SUPERFAMILY SSF51445 319 633 8.12E-103 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 ProSitePatterns PS00512 Alpha-galactosidase signature. 353 368 - T 25-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PANTHER PTHR22762:SF81 325 705 1.1E-75 T 25-04-2016 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PIRSF PIRSF005536 1 720 9.6E-283 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 Pfam PF02065 Melibiase 283 628 5.4E-170 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 PANTHER PTHR22762 325 705 1.1E-75 T 25-04-2016 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 26 279 7.8E-65 T 25-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 651 717 1.8E-14 T 25-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APQ13_RS03750 c1e5622d785a5a48730ca1825acea2d1 720 Gene3D G3DSA:3.20.20.70 317 614 2.0E-44 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 SMART SM00382 36 223 2.2E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 PANTHER PTHR24220:SF578 9 231 4.2E-119 T 25-04-2016 APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 SUPERFAMILY SSF52540 7 229 1.39E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 PANTHER PTHR24220 9 231 4.2E-119 T 25-04-2016 APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 Pfam PF00005 ABC transporter 27 175 5.4E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03825 eb85bc9be22f4d93205711874b4145ef 235 Gene3D G3DSA:3.40.50.300 6 229 1.2E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 Gene3D G3DSA:3.20.20.80 3 473 5.9E-151 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PANTHER PTHR10353 3 478 8.0E-286 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 25-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PANTHER PTHR10353:SF35 3 478 8.0E-286 T 25-04-2016 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 Pfam PF00232 Glycosyl hydrolase family 1 3 473 5.4E-136 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 SUPERFAMILY SSF51445 1 473 2.6E-161 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 9.8E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 9.8E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 9.8E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 9.8E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS03305 6e32d800be11d53b22d27365a683f9fd 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 9.8E-17 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 Gene3D G3DSA:1.20.1250.20 253 455 8.9E-15 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 PANTHER PTHR23501:SF7 3 416 3.1E-109 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 SUPERFAMILY SSF103473 242 455 1.29E-53 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 SUPERFAMILY SSF103473 4 186 1.29E-53 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 158 182 7.4E-8 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 7.4E-8 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 7.4E-8 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 296 320 7.4E-8 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 PANTHER PTHR23501 3 416 3.1E-109 T 25-04-2016 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 Pfam PF07690 Major Facilitator Superfamily 12 402 2.4E-39 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS07065 b28b571b4930cbce7f6709e940227e8f 464 Gene3D G3DSA:1.20.1250.20 9 186 4.6E-24 T 25-04-2016 APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 PANTHER PTHR13932:SF5 1 378 6.2E-150 T 25-04-2016 APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 SMART SM00729 5 222 2.4E-55 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 Pfam PF06969 HemN C-terminal domain 301 366 8.3E-18 T 25-04-2016 IPR010723 HemN, C-terminal APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 355 4.0E-114 T 25-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 Gene3D G3DSA:3.80.30.20 5 238 2.0E-38 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 PANTHER PTHR13932 1 378 6.2E-150 T 25-04-2016 APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 Pfam PF04055 Radical SAM superfamily 10 174 7.7E-21 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APQ13_RS01385 7bc2da3a3b85d635004d8d81b7e21658 380 SUPERFAMILY SSF102114 4 376 8.63E-115 T 25-04-2016 APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 Gene3D G3DSA:3.40.50.300 2 242 2.4E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 PANTHER PTHR24220:SF534 6 245 1.5E-88 T 25-04-2016 APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 PANTHER PTHR24220 6 245 1.5E-88 T 25-04-2016 APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 Pfam PF00005 ABC transporter 25 180 2.2E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 SMART SM00382 34 229 2.8E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS01265 d5c7aec831ae5d7f167cfc620e4346ce 252 SUPERFAMILY SSF52540 4 238 2.56E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00180 16ccf3c197160854a6d64a07155eccf2 420 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 13 408 3.4E-163 T 25-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 APQ13_RS00180 16ccf3c197160854a6d64a07155eccf2 420 PANTHER PTHR13285 19 409 2.0E-57 T 25-04-2016 APQ13_RS00180 16ccf3c197160854a6d64a07155eccf2 420 PIRSF PIRSF500216 10 413 1.3E-181 T 25-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 APQ13_RS00180 16ccf3c197160854a6d64a07155eccf2 420 PIRSF PIRSF016636 14 410 1.6E-78 T 25-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 SUPERFAMILY SSF52777 216 455 2.31E-74 T 25-04-2016 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Pfam PF00364 Biotin-requiring enzyme 4 76 3.1E-18 T 25-04-2016 IPR000089 Biotin/lipoyl attachment APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Gene3D G3DSA:4.10.320.10 164 205 1.3E-15 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Gene3D G3DSA:4.10.320.10 117 163 1.4E-19 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Gene3D G3DSA:3.30.559.10 214 454 2.1E-76 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Pfam PF02817 e3 binding domain 163 198 3.2E-13 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Pfam PF02817 e3 binding domain 121 156 2.4E-14 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 PANTHER PTHR23151 3 164 2.7E-136 T 25-04-2016 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 PANTHER PTHR23151 206 454 2.7E-136 T 25-04-2016 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 SUPERFAMILY SSF47005 115 158 2.62E-12 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 SUPERFAMILY SSF51230 1 82 1.57E-23 T 25-04-2016 IPR011053 Single hybrid motif APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Gene3D G3DSA:2.40.50.100 1 84 1.6E-26 T 25-04-2016 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 SUPERFAMILY SSF47005 162 201 3.01E-10 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APQ13_RS07085 93ddc2fd968ec21c9dff62acd1409f2a 455 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 224 454 3.0E-73 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 SUPERFAMILY SSF47384 222 296 8.04E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 PRINTS PR01780 Lantibiotic regulatory protein signature 207 221 1.4E-11 T 25-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 PRINTS PR01780 Lantibiotic regulatory protein signature 408 423 1.4E-11 T 25-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 PRINTS PR01780 Lantibiotic regulatory protein signature 244 260 1.4E-11 T 25-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 PRINTS PR01780 Lantibiotic regulatory protein signature 343 358 1.4E-11 T 25-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 SMART SM00387 347 459 4.2E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 296 1.8E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 Gene3D G3DSA:3.30.565.10 302 459 7.9E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 Gene3D G3DSA:1.10.287.130 230 296 5.1E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 PANTHER PTHR24423 169 442 5.1E-40 T 25-04-2016 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 PANTHER PTHR24423 1 10 5.1E-40 T 25-04-2016 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 456 3.9E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 SMART SM00388 235 300 1.0E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS04735 60a2516ee5d27ad29fa471cbd5333336 460 SUPERFAMILY SSF55874 293 445 9.95E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 446 3.9E-109 T 25-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 Gene3D G3DSA:1.10.860.10 10 112 1.1E-34 T 25-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 PANTHER PTHR30153 2 454 8.4E-195 T 25-04-2016 APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 5.2E-32 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 Gene3D G3DSA:3.40.50.300 171 449 3.4E-103 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 SUPERFAMILY SSF52540 183 440 7.27E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 449 7.2E-166 T 25-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APQ13_RS07800 638e607036dd5b36991878138b1ac8ab 454 SUPERFAMILY SSF48024 8 119 1.05E-34 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APQ13_RS02385 2ea4db00e37923d336d2c1bf265dad6a 235 SMART SM00382 32 207 1.6E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02385 2ea4db00e37923d336d2c1bf265dad6a 235 PANTHER PTHR24220:SF530 9 234 5.0E-88 T 25-04-2016 APQ13_RS02385 2ea4db00e37923d336d2c1bf265dad6a 235 Pfam PF00005 ABC transporter 23 158 6.8E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02385 2ea4db00e37923d336d2c1bf265dad6a 235 PANTHER PTHR24220 9 234 5.0E-88 T 25-04-2016 APQ13_RS02385 2ea4db00e37923d336d2c1bf265dad6a 235 SUPERFAMILY SSF52540 6 221 7.48E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02385 2ea4db00e37923d336d2c1bf265dad6a 235 Gene3D G3DSA:3.40.50.300 5 223 2.1E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 PANTHER PTHR22769 17 142 1.2E-19 T 25-04-2016 APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 Pfam PF00293 NUDIX domain 19 135 4.0E-16 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 Gene3D G3DSA:3.90.79.10 4 146 2.2E-44 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 PANTHER PTHR22769:SF35 17 142 1.2E-19 T 25-04-2016 APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 SUPERFAMILY SSF55811 8 146 2.3E-29 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 PRINTS PR00502 NUDIX hydrolase family signature 58 73 9.6E-5 T 25-04-2016 IPR020476 NUDIX hydrolase APQ13_RS05165 c2ebc25da8f1b17b5437d8e795635e9f 151 PRINTS PR00502 NUDIX hydrolase family signature 44 58 9.6E-5 T 25-04-2016 IPR020476 NUDIX hydrolase APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 PIRSF PIRSF001461 1 219 6.8E-85 T 25-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 3.4E-76 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 Gene3D G3DSA:3.20.20.70 5 217 2.2E-91 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 PANTHER PTHR11749 2 219 5.3E-112 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 SUPERFAMILY SSF51366 3 213 1.47E-69 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS06145 cedbc22bae4c26d29cc8d39dd23851e0 219 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 213 6.3E-82 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APQ13_RS01495 d4d420e0ea4602f528ddcde40d24c297 275 Gene3D G3DSA:3.40.50.1820 17 192 2.5E-13 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01495 d4d420e0ea4602f528ddcde40d24c297 275 SUPERFAMILY SSF53474 21 184 2.17E-16 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 SUPERFAMILY SSF56672 5 247 1.25E-91 T 25-04-2016 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Pfam PF11799 impB/mucB/samB family C-terminal domain 248 358 3.2E-19 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 SUPERFAMILY SSF100879 251 351 7.65E-26 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Pfam PF00817 impB/mucB/samB family 17 167 3.8E-48 T 25-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Gene3D G3DSA:3.30.70.270 79 177 1.9E-32 T 25-04-2016 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Pfam PF11798 IMS family HHH motif 179 210 2.8E-7 T 25-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Gene3D G3DSA:1.10.150.20 179 248 4.7E-22 T 25-04-2016 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 PANTHER PTHR11076 1 363 3.1E-132 T 25-04-2016 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Hamap MF_01113 DNA polymerase IV [dinB]. 11 363 38.007 T 25-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS05920 4aa16c4f83dc821b13765720ddb55488 370 Gene3D G3DSA:3.30.1490.100 254 361 1.2E-28 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 Gene3D G3DSA:3.40.605.10 3 264 8.9E-86 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 SUPERFAMILY SSF53720 3 473 7.33E-143 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 PANTHER PTHR11699 4 474 1.5E-291 T 25-04-2016 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 Gene3D G3DSA:3.40.309.10 265 444 3.8E-64 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 Pfam PF00171 Aldehyde dehydrogenase family 16 470 7.8E-151 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS04655 b8ec7240c49d9bd5a9ae3470bd4003a7 475 PANTHER PTHR11699:SF160 4 474 1.5E-291 T 25-04-2016 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 PANTHER PTHR30570:SF4 19 285 3.6E-135 T 25-04-2016 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 Pfam PF12849 PBP superfamily domain 30 257 5.5E-33 T 25-04-2016 IPR024370 PBP domain APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 Gene3D G3DSA:3.40.190.10 232 273 1.1E-10 T 25-04-2016 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 Gene3D G3DSA:3.40.190.10 4 120 1.1E-10 T 25-04-2016 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 Gene3D G3DSA:3.40.190.10 121 231 1.9E-43 T 25-04-2016 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 SUPERFAMILY SSF53850 32 276 1.8E-71 T 25-04-2016 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 270 1.6E-86 T 25-04-2016 IPR011862 Phosphate binding protein GO:0006810 APQ13_RS02625 1a7757ac21d4b318f5dc9bcca5d977f3 287 PANTHER PTHR30570 19 285 3.6E-135 T 25-04-2016 APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 SUPERFAMILY SSF53383 1 375 8.8E-90 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 PANTHER PTHR11601:SF50 1 380 1.6E-193 T 25-04-2016 APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 PANTHER PTHR11601 1 380 1.6E-193 T 25-04-2016 APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 Pfam PF00266 Aminotransferase class-V 2 365 1.8E-62 T 25-04-2016 IPR000192 Aminotransferase class V domain APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 Gene3D G3DSA:3.90.1150.10 247 372 1.1E-28 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 Gene3D G3DSA:3.40.640.10 14 246 1.8E-74 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS03925 7809e9146c9d565b250bff85e4a4142f 380 PIRSF PIRSF005572 1 380 4.0E-112 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APQ13_RS09170 ce7892187b80b6380515997218e529ea 150 Gene3D G3DSA:3.40.140.10 6 140 1.1E-39 T 25-04-2016 APQ13_RS09170 ce7892187b80b6380515997218e529ea 150 PANTHER PTHR11086 1 144 4.4E-45 T 25-04-2016 IPR015517 Deoxycytidylate deaminase-related APQ13_RS09170 ce7892187b80b6380515997218e529ea 150 PIRSF PIRSF006019 1 150 1.8E-53 T 25-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 APQ13_RS09170 ce7892187b80b6380515997218e529ea 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 71 106 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APQ13_RS09170 ce7892187b80b6380515997218e529ea 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 116 1.6E-27 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APQ13_RS09170 ce7892187b80b6380515997218e529ea 150 SUPERFAMILY SSF53927 9 141 1.19E-38 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.7E-5 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.7E-5 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 Gene3D G3DSA:1.10.10.10 1 55 1.1E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 SMART SM01134 73 231 3.3E-43 T 25-04-2016 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 SUPERFAMILY SSF46785 4 75 4.6E-10 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 SUPERFAMILY SSF100950 75 231 1.26E-18 T 25-04-2016 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 Pfam PF00455 DeoR C terminal sensor domain 77 230 7.5E-33 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 SMART SM00420 6 58 1.3E-10 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 Pfam PF08220 DeoR-like helix-turn-helix domain 6 56 2.2E-14 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 PANTHER PTHR30363:SF13 1 247 1.7E-53 T 25-04-2016 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 25-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APQ13_RS05445 6321c852886ed28840fdbbbc489be17c 248 PANTHER PTHR30363 1 247 1.7E-53 T 25-04-2016 APQ13_RS09040 d75d35043428cef7e30be59d7bcb3325 308 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 222 2.0E-89 T 25-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APQ13_RS09040 d75d35043428cef7e30be59d7bcb3325 308 PANTHER PTHR32502 1 308 3.1E-158 T 25-04-2016 APQ13_RS09040 d75d35043428cef7e30be59d7bcb3325 308 PANTHER PTHR32502:SF5 1 308 3.1E-158 T 25-04-2016 APQ13_RS09040 d75d35043428cef7e30be59d7bcb3325 308 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 308 2.0E-118 T 25-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APQ13_RS01785 333a6cb1408dd225bb2ae46283b93121 277 PANTHER PTHR10907 22 213 5.5E-44 T 25-04-2016 APQ13_RS01785 333a6cb1408dd225bb2ae46283b93121 277 Gene3D G3DSA:3.40.50.1820 12 276 2.8E-48 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01785 333a6cb1408dd225bb2ae46283b93121 277 Pfam PF00756 Putative esterase 25 271 1.4E-24 T 25-04-2016 IPR000801 Putative esterase APQ13_RS01785 333a6cb1408dd225bb2ae46283b93121 277 PANTHER PTHR10907:SF58 22 213 5.5E-44 T 25-04-2016 APQ13_RS01785 333a6cb1408dd225bb2ae46283b93121 277 SUPERFAMILY SSF53474 14 276 7.48E-45 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 Gene3D G3DSA:3.40.50.720 1 137 3.2E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 114 5.1E-24 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 SUPERFAMILY SSF55347 163 287 5.56E-16 T 25-04-2016 APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 PANTHER PTHR22604:SF76 1 315 1.5E-98 T 25-04-2016 APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 169 211 2.6E-4 T 25-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 PANTHER PTHR22604 1 315 1.5E-98 T 25-04-2016 APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 Gene3D G3DSA:3.30.360.10 139 325 7.9E-53 T 25-04-2016 APQ13_RS01525 75b52f721fc5a8efaed09ac783aca036 326 SUPERFAMILY SSF51735 2 135 6.57E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 Pfam PF05043 Mga helix-turn-helix domain 83 153 1.0E-7 T 25-04-2016 IPR007737 Mga helix-turn-helix domain APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 PANTHER PTHR30185:SF5 2 642 4.4E-16 T 25-04-2016 APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 Gene3D G3DSA:1.10.10.10 79 143 7.1E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 Gene3D G3DSA:1.10.10.10 1 64 9.5E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 Gene3D G3DSA:3.40.930.10 532 640 5.4E-9 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 525 639 4.0E-7 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 SUPERFAMILY SSF55804 524 639 1.26E-10 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 Pfam PF08279 HTH domain 6 50 7.5E-5 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS02430 deedf37cc74f7570ba2d3829a974fad8 650 PANTHER PTHR30185 2 642 4.4E-16 T 25-04-2016 APQ13_RS04745 0d7fc726bfcd93e580b6df2ed16ff4de 279 Pfam PF05857 TraX protein 9 274 4.9E-29 T 25-04-2016 IPR008875 TraX APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 SMART SM00382 26 216 5.5E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 PANTHER PTHR24220:SF327 3 239 1.6E-113 T 25-04-2016 APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 Gene3D G3DSA:3.40.50.300 1 239 2.7E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 PIRSF PIRSF039085 1 244 2.4E-96 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 SUPERFAMILY SSF52540 1 238 4.54E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 Pfam PF00005 ABC transporter 17 168 1.4E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS05665 ec2c754979ec59e45b55fd5c24cbb074 247 PANTHER PTHR24220 3 239 1.6E-113 T 25-04-2016 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 Pfam PF02504 Fatty acid synthesis protein 3 320 9.6E-103 T 25-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 PIRSF PIRSF002465 1 331 2.2E-122 T 25-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 143.084 T 25-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 Gene3D G3DSA:3.40.718.10 1 328 6.4E-129 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 329 2.8E-111 T 25-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 PANTHER PTHR30100:SF1 1 327 3.6E-124 T 25-04-2016 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 PANTHER PTHR30100 1 327 3.6E-124 T 25-04-2016 APQ13_RS07455 5532e14664de32a91b0b4b5538cea1cf 332 SUPERFAMILY SSF53659 2 327 1.15E-98 T 25-04-2016 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 25-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 SUPERFAMILY SSF55347 138 303 2.16E-51 T 25-04-2016 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 PIRSF PIRSF000098 1 428 1.8E-165 T 25-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 Gene3D G3DSA:3.30.70.260 350 416 9.0E-4 T 25-04-2016 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 PANTHER PTHR21499 1 370 2.9E-130 T 25-04-2016 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 PANTHER PTHR21499:SF2 1 370 2.9E-130 T 25-04-2016 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 SUPERFAMILY SSF51735 3 159 1.15E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 130 3.9E-18 T 25-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 Gene3D G3DSA:3.30.360.10 150 300 5.5E-55 T 25-04-2016 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 Pfam PF00742 Homoserine dehydrogenase 138 316 7.2E-61 T 25-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS03390 f41e081635e3ca8f6223deb1d4dfb4f1 428 Gene3D G3DSA:3.40.50.720 2 149 1.1E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS07205 2c7189452e5d7e316018f39d5614fe47 285 SUPERFAMILY SSF50182 115 181 8.17E-13 T 25-04-2016 IPR010920 LSM domain APQ13_RS07205 2c7189452e5d7e316018f39d5614fe47 285 PANTHER PTHR30460 1 275 1.3E-69 T 25-04-2016 APQ13_RS07205 2c7189452e5d7e316018f39d5614fe47 285 Pfam PF00924 Mechanosensitive ion channel 72 273 2.6E-38 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APQ13_RS07205 2c7189452e5d7e316018f39d5614fe47 285 Gene3D G3DSA:2.30.30.60 130 176 7.1E-14 T 25-04-2016 APQ13_RS07205 2c7189452e5d7e316018f39d5614fe47 285 SUPERFAMILY SSF82861 23 113 2.35E-15 T 25-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 293 27.782 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 Gene3D G3DSA:3.40.50.300 2 164 1.0E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 274 6.4E-78 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 SUPERFAMILY SSF52540 140 250 3.12E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 SUPERFAMILY SSF52540 2 68 3.12E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 Pfam PF01715 IPP transferase 38 269 1.4E-70 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 PANTHER PTHR11088 1 268 2.1E-98 T 25-04-2016 APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 Gene3D G3DSA:1.10.287.890 188 267 9.0E-32 T 25-04-2016 APQ13_RS01120 dd4e0e9e9a826574d97736c8a621dff3 294 SUPERFAMILY SSF52540 5 144 2.35E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 Gene3D G3DSA:3.40.630.10 323 402 1.7E-108 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 Gene3D G3DSA:3.40.630.10 2 210 1.7E-108 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 PIRSF PIRSF037215 1 406 2.2E-182 T 25-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 Pfam PF07687 Peptidase dimerisation domain 208 308 1.9E-9 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 SUPERFAMILY SSF53187 323 402 4.72E-72 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 SUPERFAMILY SSF53187 3 211 4.72E-72 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 Pfam PF01546 Peptidase family M20/M25/M40 140 399 9.9E-10 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 SUPERFAMILY SSF55031 210 321 2.77E-40 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 402 1.0E-202 T 25-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 Gene3D G3DSA:3.30.70.360 211 320 4.8E-46 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 PANTHER PTHR11014:SF3 4 92 1.2E-166 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 PANTHER PTHR11014:SF3 132 402 1.2E-166 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 Hamap MF_00550 Peptidase T [pepT]. 3 405 56.879 T 25-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 PANTHER PTHR11014 4 92 1.2E-166 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 PANTHER PTHR11014 132 402 1.2E-166 T 25-04-2016 APQ13_RS04590 411d58e9dd284e7986edf9ef08583c2b 406 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 SMART SM00382 33 220 1.2E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 PANTHER PTHR24220 4 243 2.4E-107 T 25-04-2016 APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 Gene3D G3DSA:3.40.50.300 2 224 1.4E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 Pfam PF00005 ABC transporter 24 173 3.1E-37 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 PANTHER PTHR24220:SF494 4 243 2.4E-107 T 25-04-2016 APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 SUPERFAMILY SSF52540 3 225 1.23E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03195 2578bb18f54da7790822667d3fdc97e6 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08935 3c3d8c7444d11c8a239fc67d468efeb9 212 PANTHER PTHR30353 1 212 7.1E-63 T 25-04-2016 IPR032818 DedA family APQ13_RS08935 3c3d8c7444d11c8a239fc67d468efeb9 212 PANTHER PTHR30353:SF0 1 212 7.1E-63 T 25-04-2016 APQ13_RS08935 3c3d8c7444d11c8a239fc67d468efeb9 212 Pfam PF09335 SNARE associated Golgi protein 45 174 4.8E-23 T 25-04-2016 IPR032816 SNARE associated Golgi protein APQ13_RS08385 0d0eeb15c7aadbbed5072cf3ee51b314 795 SUPERFAMILY SSF75005 187 639 3.57E-81 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APQ13_RS08385 0d0eeb15c7aadbbed5072cf3ee51b314 795 Pfam PF02435 Levansucrase/Invertase 186 637 1.9E-158 T 25-04-2016 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 APQ13_RS08385 0d0eeb15c7aadbbed5072cf3ee51b314 795 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 4 26 5.2E-8 T 25-04-2016 IPR022263 KxYKxGKxW signal peptide APQ13_RS08385 0d0eeb15c7aadbbed5072cf3ee51b314 795 Gene3D G3DSA:2.115.10.20 177 634 4.8E-147 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 PANTHER PTHR24220 5 256 3.2E-83 T 25-04-2016 APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 Gene3D G3DSA:3.40.50.300 3 233 5.9E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 SUPERFAMILY SSF52540 3 232 5.11E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 Pfam PF00005 ABC transporter 19 170 3.2E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 SMART SM00382 28 229 6.7E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00155 01fa9ecfe6ef6cbb433e07b331c203ec 260 PANTHER PTHR24220:SF383 5 256 3.2E-83 T 25-04-2016 APQ13_RS03895 af00ebed12698a91fded120593e1f0a9 111 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 104 1.1E-24 T 25-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 APQ13_RS03895 af00ebed12698a91fded120593e1f0a9 111 Gene3D G3DSA:3.30.70.1490 6 107 1.8E-14 T 25-04-2016 APQ13_RS03895 af00ebed12698a91fded120593e1f0a9 111 PANTHER PTHR39178 2 110 3.3E-22 T 25-04-2016 APQ13_RS03895 af00ebed12698a91fded120593e1f0a9 111 SUPERFAMILY SSF118010 1 107 1.44E-31 T 25-04-2016 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 Pfam PF00455 DeoR C terminal sensor domain 65 217 4.1E-46 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 14 28 4.6E-7 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 46 4.6E-7 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 PANTHER PTHR30363 1 237 3.3E-71 T 25-04-2016 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 SUPERFAMILY SSF46785 5 67 4.38E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 SMART SM00420 1 48 3.4E-9 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 SMART SM01134 63 220 2.9E-63 T 25-04-2016 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 Pfam PF08220 DeoR-like helix-turn-helix domain 2 50 2.7E-13 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 PANTHER PTHR30363:SF4 1 237 3.3E-71 T 25-04-2016 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 SUPERFAMILY SSF100950 64 217 1.58E-32 T 25-04-2016 APQ13_RS03790 66bba88e5f2f47940ed5f8fcafab83e5 237 Gene3D G3DSA:3.40.50.1360 66 203 3.8E-14 T 25-04-2016 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 SUPERFAMILY SSF46785 87 133 7.37E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 SUPERFAMILY SSF63520 310 409 1.44E-22 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 Pfam PF08279 HTH domain 104 152 3.7E-5 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 PANTHER PTHR36203 4 502 3.3E-101 T 25-04-2016 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 Gene3D G3DSA:1.10.10.10 82 154 1.0E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 PANTHER PTHR36203:SF1 4 502 3.3E-101 T 25-04-2016 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 Pfam PF00874 PRD domain 254 298 1.9E-6 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 Pfam PF00874 PRD domain 322 409 1.2E-20 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS06485 b2bc87911a09c196e2ab7a46c6b4b08d 554 Gene3D G3DSA:1.10.1790.10 310 408 5.6E-20 T 25-04-2016 IPR011608 PRD domain GO:0006355 APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 Gene3D G3DSA:2.10.109.10 135 182 2.9E-19 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 Gene3D G3DSA:2.10.109.10 23 81 2.9E-19 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 154 1.2E-7 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 71 83 1.2E-7 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 PANTHER PTHR12383 4 184 2.7E-20 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 Pfam PF00717 Peptidase S24-like 42 94 4.1E-6 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 PANTHER PTHR12383:SF14 4 184 2.7E-20 T 25-04-2016 APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 SUPERFAMILY SSF51306 24 181 4.71E-35 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APQ13_RS02415 c0f4c320ff91cf4f804e4c315f54130d 184 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 175 2.4E-36 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS03885 eeeb202bfece55618f65dfc7c4bec455 231 SUPERFAMILY SSF55729 27 198 1.24E-37 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS03885 eeeb202bfece55618f65dfc7c4bec455 231 Pfam PF13302 Acetyltransferase (GNAT) domain 58 174 6.7E-16 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS03885 eeeb202bfece55618f65dfc7c4bec455 231 Gene3D G3DSA:3.40.630.30 16 214 1.3E-54 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS03885 eeeb202bfece55618f65dfc7c4bec455 231 PANTHER PTHR13256 7 221 6.2E-84 T 25-04-2016 APQ13_RS03885 eeeb202bfece55618f65dfc7c4bec455 231 PANTHER PTHR13256:SF22 7 221 6.2E-84 T 25-04-2016 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 Gene3D G3DSA:1.10.1750.10 357 452 3.9E-39 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 Gene3D G3DSA:3.40.50.300 108 278 2.8E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 362 430 1.3E-31 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 ProSitePatterns PS01008 DnaA protein signature. 411 430 - T 25-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 SMART SM00760 361 430 4.8E-42 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PANTHER PTHR30050 4 452 7.7E-177 T 25-04-2016 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 452 30.656 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 451 5.2E-156 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 SUPERFAMILY SSF52540 111 325 5.23E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 SMART SM00382 144 277 9.3E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 7.6E-49 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 411 430 7.6E-49 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 7.6E-49 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 245 272 7.6E-49 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 7.6E-49 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 PANTHER PTHR30050:SF2 4 452 7.7E-177 T 25-04-2016 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 SUPERFAMILY SSF48295 358 452 6.54E-35 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 Gene3D G3DSA:1.10.8.60 280 347 1.7E-19 T 25-04-2016 APQ13_RS07660 ff431d02dc5c51258d7bdd14b22fb3b6 452 Pfam PF00308 Bacterial dnaA protein 112 331 2.2E-85 T 25-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 PANTHER PTHR23135 1 426 3.0E-147 T 25-04-2016 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 378 3.7E-17 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Pfam PF01225 Mur ligase family, catalytic domain 4 103 1.6E-25 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Gene3D G3DSA:3.40.50.720 3 88 5.8E-25 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Gene3D G3DSA:3.40.1190.10 92 298 2.5E-59 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 5 427 3.9E-121 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Gene3D G3DSA:3.90.190.20 299 435 1.5E-42 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 SUPERFAMILY SSF51984 3 87 6.28E-19 T 25-04-2016 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 SUPERFAMILY SSF53623 90 295 2.88E-56 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 SUPERFAMILY SSF53244 296 433 6.04E-37 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 437 34.506 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 Pfam PF08245 Mur ligase middle domain 108 275 4.5E-21 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS09695 7a65a44c4bc4352377e8cea0a68fd4cb 443 PANTHER PTHR23135:SF5 1 426 3.0E-147 T 25-04-2016 APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 ProSitePatterns PS01125 ROK family signature. 139 166 - T 25-04-2016 IPR000600 ROK family APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 Gene3D G3DSA:3.30.420.40 145 302 7.2E-55 T 25-04-2016 APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 320 2.0E-99 T 25-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 Gene3D G3DSA:3.30.420.40 2 144 2.5E-42 T 25-04-2016 APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 SUPERFAMILY SSF53067 4 321 1.54E-68 T 25-04-2016 APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 Pfam PF00480 ROK family 6 319 1.7E-73 T 25-04-2016 IPR000600 ROK family APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 PANTHER PTHR18964 1 319 2.2E-97 T 25-04-2016 APQ13_RS05250 ad6b73d1cc19b37f4937ac1fdbb0cda3 323 PANTHER PTHR18964:SF123 1 319 2.2E-97 T 25-04-2016 APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 Pfam PF00005 ABC transporter 19 164 6.3E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 PANTHER PTHR24220 5 235 1.7E-133 T 25-04-2016 APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 Gene3D G3DSA:3.40.50.300 3 232 1.8E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 SUPERFAMILY SSF52540 3 234 3.11E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 SMART SM00382 28 215 6.7E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 PANTHER PTHR24220:SF568 5 235 1.7E-133 T 25-04-2016 APQ13_RS00295 a46f3c410d26e2db0214a330cb7f36c2 236 PIRSF PIRSF039137 1 236 2.7E-109 T 25-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 APQ13_RS08050 2a8f6e9b8707377c89c22d897341a3fb 144 Gene3D G3DSA:2.40.50.40 44 106 1.2E-8 T 25-04-2016 APQ13_RS08050 2a8f6e9b8707377c89c22d897341a3fb 144 SMART SM00850 47 143 1.9E-22 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS08050 2a8f6e9b8707377c89c22d897341a3fb 144 PANTHER PTHR37299:SF2 1 144 8.4E-16 T 25-04-2016 APQ13_RS08050 2a8f6e9b8707377c89c22d897341a3fb 144 PANTHER PTHR37299 1 144 8.4E-16 T 25-04-2016 APQ13_RS08050 2a8f6e9b8707377c89c22d897341a3fb 144 Pfam PF04397 LytTr DNA-binding domain 50 142 7.0E-19 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 PANTHER PTHR24220:SF523 248 281 1.6E-94 T 25-04-2016 APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 PANTHER PTHR24220:SF523 7 225 1.6E-94 T 25-04-2016 APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 Gene3D G3DSA:3.40.50.300 2 225 8.2E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 PANTHER PTHR24220 248 281 1.6E-94 T 25-04-2016 APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 PANTHER PTHR24220 7 225 1.6E-94 T 25-04-2016 APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 SMART SM00382 30 211 2.1E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 Pfam PF00005 ABC transporter 22 161 1.3E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 SUPERFAMILY SSF52540 2 227 1.65E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02580 70c1a6bd6b65b47d2c4b160b386fb16c 302 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 Pfam PF09383 NIL domain 278 349 9.1E-19 T 25-04-2016 IPR018449 NIL domain APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 SMART SM00930 275 350 8.7E-26 T 25-04-2016 IPR018449 NIL domain APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 Pfam PF00005 ABC transporter 26 178 1.4E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 SUPERFAMILY SSF55021 266 352 8.58E-20 T 25-04-2016 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 SMART SM00382 34 249 2.6E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 PANTHER PTHR24220:SF549 7 271 9.9E-136 T 25-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 PANTHER PTHR24220 7 271 9.9E-136 T 25-04-2016 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 Gene3D G3DSA:3.30.70.260 246 352 5.3E-26 T 25-04-2016 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 SUPERFAMILY SSF52540 5 249 4.26E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08835 55f80a84b31f09c30a5974a28b2309a1 354 Gene3D G3DSA:3.40.50.300 5 245 5.3E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04550 57a9b886269743977c06bef3b8597a57 208 Gene3D G3DSA:3.40.50.1240 1 206 1.8E-55 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS04550 57a9b886269743977c06bef3b8597a57 208 PANTHER PTHR23029:SF1 1 207 2.2E-41 T 25-04-2016 APQ13_RS04550 57a9b886269743977c06bef3b8597a57 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 202 4.1E-49 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS04550 57a9b886269743977c06bef3b8597a57 208 SUPERFAMILY SSF53254 1 205 6.67E-52 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS04550 57a9b886269743977c06bef3b8597a57 208 SMART SM00855 2 160 1.1E-17 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS04550 57a9b886269743977c06bef3b8597a57 208 PANTHER PTHR23029 1 207 2.2E-41 T 25-04-2016 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PANTHER PTHR11732 1 288 9.8E-131 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 SUPERFAMILY SSF51430 3 270 5.24E-86 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 Pfam PF00248 Aldo/keto reductase family 30 261 1.6E-42 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PANTHER PTHR11732:SF236 1 288 9.8E-131 T 25-04-2016 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PRINTS PR00069 Aldo-keto reductase signature 35 59 2.5E-43 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PRINTS PR00069 Aldo-keto reductase signature 158 187 2.5E-43 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PRINTS PR00069 Aldo-keto reductase signature 124 141 2.5E-43 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PRINTS PR00069 Aldo-keto reductase signature 197 221 2.5E-43 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 PRINTS PR00069 Aldo-keto reductase signature 95 113 2.5E-43 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS04640 a67accc7afbb93ca51db73800a6f4f3d 288 Gene3D G3DSA:3.20.20.100 3 265 6.9E-92 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 2.7E-37 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 2.7E-37 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 380 396 2.7E-37 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 2.7E-37 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 2.7E-37 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PANTHER PTHR22594 1 496 5.4E-266 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 SUPERFAMILY SSF55681 156 495 6.89E-118 T 25-04-2016 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 SUPERFAMILY SSF50249 8 149 2.03E-44 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 Pfam PF01336 OB-fold nucleic acid binding domain 64 138 9.6E-15 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 496 2.1E-206 T 25-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 Gene3D G3DSA:3.30.930.10 151 494 5.1E-120 T 25-04-2016 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 495 4.7E-78 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 PANTHER PTHR22594:SF4 1 496 5.4E-266 T 25-04-2016 APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 Gene3D G3DSA:2.40.50.140 10 149 6.5E-50 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS04240 e2381e453a11950e4fc4cd245fb798f7 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 15 496 43.38 T 25-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 PANTHER PTHR24220 6 230 2.9E-95 T 25-04-2016 APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 PANTHER PTHR24220:SF577 6 230 2.9E-95 T 25-04-2016 APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 SUPERFAMILY SSF52540 4 221 1.74E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 Pfam PF00005 ABC transporter 26 168 1.5E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 SMART SM00382 34 217 3.2E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08890 8e4fc1f3ba640e24d9a153f8a63da704 235 Gene3D G3DSA:3.40.50.300 3 221 6.8E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 Gene3D G3DSA:3.40.50.150 17 267 6.7E-70 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 41 55 1.7E-40 T 25-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 89 109 1.7E-40 T 25-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 200 217 1.7E-40 T 25-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 219 237 1.7E-40 T 25-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 242 262 1.7E-40 T 25-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 45 51 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PANTHER PTHR13370:SF8 25 51 3.0E-41 T 25-04-2016 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PANTHER PTHR13370:SF8 68 265 3.0E-41 T 25-04-2016 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 Pfam PF01555 DNA methylase 42 257 5.8E-57 T 25-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 SUPERFAMILY SSF53335 17 262 5.45E-68 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PANTHER PTHR13370 25 51 3.0E-41 T 25-04-2016 APQ13_RS05460 91aa36d95fe9d6b9ca02eb304c42c4af 269 PANTHER PTHR13370 68 265 3.0E-41 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 4 25 8.4E-7 T 25-04-2016 IPR022263 KxYKxGKxW signal peptide APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 SUPERFAMILY SSF51445 858 1038 1.34E-26 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1192 1255 1.6E-21 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1127 1188 2.4E-15 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1385 1448 8.6E-24 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1321 1384 2.6E-23 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1257 1319 5.9E-22 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:2.10.270.10 1091 1156 5.8E-11 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:2.10.270.10 175 211 1.6E-4 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:3.20.20.80 878 966 6.4E-20 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 SUPERFAMILY SSF69360 1295 1442 5.49E-27 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 SUPERFAMILY SSF51445 634 681 1.42E-32 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 SUPERFAMILY SSF51445 400 597 1.42E-32 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:2.10.270.10 1381 1459 1.1E-11 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:2.10.270.10 1320 1378 1.2E-15 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Pfam PF02324 Glycosyl hydrolase family 70 281 1103 0.0 T 25-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 SUPERFAMILY SSF69360 1080 1312 1.57E-42 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:3.20.20.80 384 689 5.3E-26 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 SUPERFAMILY SSF69360 173 219 7.19E-8 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:2.10.270.10 1189 1261 4.1E-17 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Gene3D G3DSA:2.10.270.10 1262 1319 1.5E-19 T 25-04-2016 APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Pfam PF01473 Putative cell wall binding repeat 1375 1393 1.1E-4 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Pfam PF01473 Putative cell wall binding repeat 1247 1265 6.8E-4 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Pfam PF01473 Putative cell wall binding repeat 1313 1329 0.0014 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Pfam PF01473 Putative cell wall binding repeat 1117 1136 2.0E-5 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS03625 64166ec411ba03c3ff2a0bca20b843c6 1462 Pfam PF01473 Putative cell wall binding repeat 1271 1285 0.16 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS01255 832e5af22209189861045d27af50b7f4 333 Gene3D G3DSA:3.40.50.2300 166 297 5.8E-56 T 25-04-2016 APQ13_RS01255 832e5af22209189861045d27af50b7f4 333 Pfam PF04392 ABC transporter substrate binding protein 40 329 1.5E-111 T 25-04-2016 IPR007487 ABC transporter, substrate-binding protein APQ13_RS01255 832e5af22209189861045d27af50b7f4 333 SUPERFAMILY SSF53822 38 259 1.01E-18 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS01255 832e5af22209189861045d27af50b7f4 333 Gene3D G3DSA:3.40.50.2300 38 165 3.5E-57 T 25-04-2016 APQ13_RS01255 832e5af22209189861045d27af50b7f4 333 PANTHER PTHR35271 8 332 1.6E-61 T 25-04-2016 APQ13_RS00270 98d6ee0b925814aba96f5126b9c0aae3 82 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 7 76 1.9E-28 T 25-04-2016 IPR016979 Protein of unknown function DUF2129 APQ13_RS00270 98d6ee0b925814aba96f5126b9c0aae3 82 PIRSF PIRSF031653 1 82 4.5E-32 T 25-04-2016 IPR016979 Protein of unknown function DUF2129 APQ13_RS00270 98d6ee0b925814aba96f5126b9c0aae3 82 PANTHER PTHR41304:SF1 3 82 7.6E-18 T 25-04-2016 APQ13_RS00270 98d6ee0b925814aba96f5126b9c0aae3 82 PANTHER PTHR41304 3 82 7.6E-18 T 25-04-2016 APQ13_RS00270 98d6ee0b925814aba96f5126b9c0aae3 82 Hamap MF_01126 UPF0298 protein . 3 80 22.039 T 25-04-2016 IPR016979 Protein of unknown function DUF2129 APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 PIRSF PIRSF000535 1 308 1.1E-69 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 SUPERFAMILY SSF53613 3 290 2.96E-60 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 PANTHER PTHR10584 3 305 1.3E-68 T 25-04-2016 APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 3 306 1.2E-102 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 3 306 1.2E-104 T 25-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 Gene3D G3DSA:3.40.1190.20 34 308 1.0E-64 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 Pfam PF00294 pfkB family carbohydrate kinase 12 291 9.6E-44 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB APQ13_RS07155 ddc82b8b293a7e6db897227eb10c7248 310 PANTHER PTHR10584:SF170 3 305 1.3E-68 T 25-04-2016 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 Pfam PF00664 ABC transporter transmembrane region 24 294 1.4E-43 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 Pfam PF00005 ABC transporter 358 506 1.2E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 SUPERFAMILY SSF90123 11 323 3.14E-69 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 SMART SM00382 366 558 2.3E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 Gene3D G3DSA:3.40.50.300 340 572 3.3E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 PANTHER PTHR24221 2 576 7.6E-272 T 25-04-2016 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 PANTHER PTHR24221:SF271 2 576 7.6E-272 T 25-04-2016 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 Gene3D G3DSA:1.20.1560.10 12 322 1.8E-67 T 25-04-2016 APQ13_RS02905 1df3ff074caa444b69ff43160ea030ec 581 SUPERFAMILY SSF52540 333 576 2.49E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 TIGRFAM TIGR03107 glu_aminopep: glutamyl aminopeptidase 5 353 2.9E-195 T 25-04-2016 IPR017538 Peptidase M42, glutamyl aminopeptidase MetaCyc: PWY-5706|MetaCyc: PWY-5707|MetaCyc: PWY-7614 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 PANTHER PTHR32481 1 355 1.4E-153 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 SUPERFAMILY SSF101821 71 182 8.7E-25 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 Gene3D G3DSA:3.40.630.10 1 74 1.2E-76 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 Gene3D G3DSA:3.40.630.10 171 354 1.2E-76 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 SUPERFAMILY SSF53187 174 352 2.88E-58 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 SUPERFAMILY SSF53187 3 81 2.88E-58 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 PIRSF PIRSF001123 1 355 1.9E-135 T 25-04-2016 IPR008007 Peptidase M42 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 PANTHER PTHR32481:SF0 1 355 1.4E-153 T 25-04-2016 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 Pfam PF05343 M42 glutamyl aminopeptidase 45 334 2.0E-97 T 25-04-2016 IPR008007 Peptidase M42 APQ13_RS08685 51a0a743302f3a7f5d8eb746f456108b 355 Gene3D G3DSA:2.40.30.40 76 163 9.9E-27 T 25-04-2016 IPR023367 Peptidase M42, domain 2 APQ13_RS06955 c63147225be4a567a2f60c7588fa7c10 184 Pfam PF03551 Transcriptional regulator PadR-like family 10 81 1.2E-12 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal APQ13_RS06955 c63147225be4a567a2f60c7588fa7c10 184 SUPERFAMILY SSF46785 6 170 1.28E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06955 c63147225be4a567a2f60c7588fa7c10 184 Gene3D G3DSA:1.10.10.10 6 92 1.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06955 c63147225be4a567a2f60c7588fa7c10 184 PANTHER PTHR33169 1 131 5.1E-13 T 25-04-2016 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 SMART SM01134 66 228 7.1E-57 T 25-04-2016 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 3 37 - T 25-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 SUPERFAMILY SSF46785 2 56 9.02E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 PANTHER PTHR30363:SF16 1 248 6.4E-115 T 25-04-2016 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 SUPERFAMILY SSF100950 67 229 1.05E-32 T 25-04-2016 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 Gene3D G3DSA:1.10.10.10 1 52 7.9E-10 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 21 35 4.9E-7 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 35 53 4.9E-7 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 Gene3D G3DSA:3.40.50.1360 70 211 1.0E-18 T 25-04-2016 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 Pfam PF08220 DeoR-like helix-turn-helix domain 3 57 4.5E-17 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 SMART SM00420 3 55 1.2E-16 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 PANTHER PTHR30363 1 248 6.4E-115 T 25-04-2016 APQ13_RS05525 4638674e44135afb471aea4a46f6b40b 248 Pfam PF00455 DeoR C terminal sensor domain 68 227 3.9E-47 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain APQ13_RS01280 6c94eafdb39197a6dc3672f567ab64d1 263 PANTHER PTHR10907:SF33 5 217 2.9E-34 T 25-04-2016 APQ13_RS01280 6c94eafdb39197a6dc3672f567ab64d1 263 Pfam PF00756 Putative esterase 10 246 7.6E-20 T 25-04-2016 IPR000801 Putative esterase APQ13_RS01280 6c94eafdb39197a6dc3672f567ab64d1 263 SUPERFAMILY SSF53474 4 252 5.4E-46 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01280 6c94eafdb39197a6dc3672f567ab64d1 263 Gene3D G3DSA:3.40.50.1820 5 253 5.6E-57 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01280 6c94eafdb39197a6dc3672f567ab64d1 263 PANTHER PTHR10907 5 217 2.9E-34 T 25-04-2016 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 Gene3D G3DSA:1.20.1250.20 193 380 1.0E-30 T 25-04-2016 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 Gene3D G3DSA:1.20.1250.20 2 185 7.7E-35 T 25-04-2016 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 SUPERFAMILY SSF103473 200 381 2.62E-31 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PANTHER PTHR23504 1 377 5.3E-80 T 25-04-2016 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 SUPERFAMILY SSF103473 2 233 1.44E-41 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PANTHER PTHR23504:SF14 1 377 5.3E-80 T 25-04-2016 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 330 353 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 127 149 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 9 25 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 39 58 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 211 228 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 269 290 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 PRINTS PR01035 Tetracycline resistance protein signature 97 118 2.7E-11 T 25-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APQ13_RS00550 2e1f614e8169fda403eb47b274dcc52a 389 Pfam PF07690 Major Facilitator Superfamily 4 288 6.7E-43 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS06335 e83dd931b331e1166c3d779066936262 180 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 170 3.5E-79 T 25-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 APQ13_RS06335 e83dd931b331e1166c3d779066936262 180 PIRSF PIRSF038321 1 180 1.4E-89 T 25-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 APQ13_RS06335 e83dd931b331e1166c3d779066936262 180 PANTHER PTHR40399 2 180 2.1E-76 T 25-04-2016 APQ13_RS06335 e83dd931b331e1166c3d779066936262 180 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 2 179 2.1E-80 T 25-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 APQ13_RS09405 3892213f8902a204a97e0529229de5c0 264 PANTHER PTHR13773:SF0 1 261 4.7E-66 T 25-04-2016 APQ13_RS09405 3892213f8902a204a97e0529229de5c0 264 Pfam PF01148 Cytidylyltransferase family 3 261 3.0E-72 T 25-04-2016 APQ13_RS09405 3892213f8902a204a97e0529229de5c0 264 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 223 249 - T 25-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 APQ13_RS09405 3892213f8902a204a97e0529229de5c0 264 PANTHER PTHR13773 1 261 4.7E-66 T 25-04-2016 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 PANTHER PTHR21235:SF2 1 251 3.6E-124 T 25-04-2016 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 SUPERFAMILY SSF51366 1 251 2.2E-84 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 PANTHER PTHR21235 1 251 3.6E-124 T 25-04-2016 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 Pfam PF00977 Histidine biosynthesis protein 5 234 7.3E-89 T 25-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.789 T 25-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.6E-110 T 25-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APQ13_RS02015 72c73818a9beccb71e1dd4a85c470264 251 Gene3D G3DSA:3.20.20.70 4 251 1.7E-103 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS01375 8b21e5bd4d3c2d3e8e8fefaeb9eab725 188 PANTHER PTHR10204 1 184 9.1E-42 T 25-04-2016 APQ13_RS01375 8b21e5bd4d3c2d3e8e8fefaeb9eab725 188 SUPERFAMILY SSF52218 1 188 2.17E-48 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS01375 8b21e5bd4d3c2d3e8e8fefaeb9eab725 188 Pfam PF02525 Flavodoxin-like fold 1 181 1.1E-39 T 25-04-2016 IPR003680 Flavodoxin-like fold APQ13_RS01375 8b21e5bd4d3c2d3e8e8fefaeb9eab725 188 PANTHER PTHR10204:SF40 1 184 9.1E-42 T 25-04-2016 APQ13_RS01375 8b21e5bd4d3c2d3e8e8fefaeb9eab725 188 Gene3D G3DSA:3.40.50.360 1 187 4.6E-51 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS03760 c29d4e43133612ee5b9a793124905c01 106 SUPERFAMILY SSF46689 7 103 2.51E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS03760 c29d4e43133612ee5b9a793124905c01 106 Gene3D G3DSA:1.10.10.60 13 100 7.4E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS06130 9a105c65d2675656b0a48121419fb0b9 322 SUPERFAMILY SSF109604 154 281 1.01E-9 T 25-04-2016 APQ13_RS06130 9a105c65d2675656b0a48121419fb0b9 322 Gene3D G3DSA:2.40.50.140 18 89 4.7E-5 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06130 9a105c65d2675656b0a48121419fb0b9 322 PANTHER PTHR37294:SF1 1 314 1.3E-113 T 25-04-2016 APQ13_RS06130 9a105c65d2675656b0a48121419fb0b9 322 Pfam PF01966 HD domain 159 278 1.8E-7 T 25-04-2016 IPR006674 HD domain APQ13_RS06130 9a105c65d2675656b0a48121419fb0b9 322 PANTHER PTHR37294 1 314 1.3E-113 T 25-04-2016 APQ13_RS06130 9a105c65d2675656b0a48121419fb0b9 322 Gene3D G3DSA:1.10.3210.10 159 279 7.8E-6 T 25-04-2016 IPR006674 HD domain APQ13_RS05585 cc782077f078eac7487457555b87b985 105 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 62 14.398 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS05585 cc782077f078eac7487457555b87b985 105 Pfam PF01192 RNA polymerase Rpb6 10 59 4.9E-11 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS05585 cc782077f078eac7487457555b87b985 105 Gene3D G3DSA:3.90.940.10 2 84 6.0E-25 T 25-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS05585 cc782077f078eac7487457555b87b985 105 SUPERFAMILY SSF63562 2 79 5.06E-23 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS05585 cc782077f078eac7487457555b87b985 105 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 59 1.5E-13 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS05585 cc782077f078eac7487457555b87b985 105 SMART SM01409 9 61 1.9E-11 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APQ13_RS05585 cc782077f078eac7487457555b87b985 105 PANTHER PTHR34476 3 91 3.9E-21 T 25-04-2016 APQ13_RS02505 a747920ee3f165cc5d37b929b2778d63 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 58 2.6E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02505 a747920ee3f165cc5d37b929b2778d63 185 Gene3D G3DSA:1.10.357.10 3 176 1.9E-15 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS02505 a747920ee3f165cc5d37b929b2778d63 185 SUPERFAMILY SSF46689 4 72 2.67E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS02505 a747920ee3f165cc5d37b929b2778d63 185 PANTHER PTHR30055 1 178 1.9E-24 T 25-04-2016 APQ13_RS02505 a747920ee3f165cc5d37b929b2778d63 185 PANTHER PTHR30055:SF55 1 178 1.9E-24 T 25-04-2016 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 PANTHER PTHR11938:SF106 26 310 1.1E-158 T 25-04-2016 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 Gene3D G3DSA:3.20.20.70 1 308 3.3E-79 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 PIRSF PIRSF000164 1 309 3.6E-69 T 25-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 SUPERFAMILY SSF51395 1 307 7.94E-72 T 25-04-2016 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 PANTHER PTHR11938 26 310 1.1E-158 T 25-04-2016 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 Pfam PF01180 Dihydroorotate dehydrogenase 5 292 4.0E-80 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 307 29.158 T 25-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 APQ13_RS05020 4f1affa292140de7ed6da4b16f1968e6 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 305 9.4E-57 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APQ13_RS00450 1a0570d4bae0ed9ad6ec47ce564e5552 230 Pfam PF01048 Phosphorylase superfamily 2 226 1.1E-47 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS00450 1a0570d4bae0ed9ad6ec47ce564e5552 230 SUPERFAMILY SSF53167 1 229 3.8E-70 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS00450 1a0570d4bae0ed9ad6ec47ce564e5552 230 PANTHER PTHR21234 1 230 2.4E-45 T 25-04-2016 IPR018017 Nucleoside phosphorylase APQ13_RS00450 1a0570d4bae0ed9ad6ec47ce564e5552 230 Gene3D G3DSA:3.40.50.1580 1 229 5.6E-70 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS00450 1a0570d4bae0ed9ad6ec47ce564e5552 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 1.5E-63 T 25-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Gene3D G3DSA:3.30.420.10 421 593 1.1E-58 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044:SF26 1124 1437 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044:SF26 22 554 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044:SF26 945 1086 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044:SF26 840 925 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Gene3D G3DSA:1.10.150.280 1399 1449 1.5E-8 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 SUPERFAMILY SSF50249 237 320 1.54E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 421 638 1.0E-36 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Gene3D G3DSA:3.20.20.140 634 810 8.5E-57 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Gene3D G3DSA:3.20.20.140 337 420 8.5E-57 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 206 4.5E-25 T 25-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 SMART SM00481 339 406 3.7E-24 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Pfam PF14480 DNA polymerase III polC-type N-terminus I 4 71 1.1E-14 T 25-04-2016 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 SMART SM00479 424 590 3.0E-41 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 SUPERFAMILY SSF53098 424 890 3.03E-92 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1461 0.0 T 25-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Pfam PF14579 Helix-hairpin-helix motif 1378 1455 6.0E-7 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044 1124 1437 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044 22 554 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044 945 1086 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 PANTHER PTHR23044 840 925 0.0 T 25-04-2016 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Gene3D G3DSA:2.40.50.140 228 329 2.0E-7 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1465 426.522 T 25-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Pfam PF02811 PHP domain 340 698 1.1E-45 T 25-04-2016 IPR004013 PHP domain GO:0003824 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 839 1270 1.9E-91 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS07110 361dc1f7bc76cfec0bc7b91a3bf145fe 1465 Pfam PF00929 Exonuclease 426 580 7.1E-33 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APQ13_RS00795 6f474b9b32197c36bf1849da867d5b96 310 PANTHER PTHR30213 2 287 5.1E-37 T 25-04-2016 APQ13_RS00795 6f474b9b32197c36bf1849da867d5b96 310 PANTHER PTHR30213:SF1 2 287 5.1E-37 T 25-04-2016 APQ13_RS00795 6f474b9b32197c36bf1849da867d5b96 310 PIRSF PIRSF035875 2 297 2.2E-56 T 25-04-2016 IPR017039 Virulence factor BrkB APQ13_RS00795 6f474b9b32197c36bf1849da867d5b96 310 Pfam PF03631 Virulence factor BrkB 25 278 1.8E-45 T 25-04-2016 IPR017039 Virulence factor BrkB APQ13_RS03880 ff1c86cd4659bf301f5e051a276d10fe 163 PANTHER PTHR22769 3 159 1.1E-21 T 25-04-2016 APQ13_RS03880 ff1c86cd4659bf301f5e051a276d10fe 163 Gene3D G3DSA:3.90.79.10 2 151 1.4E-29 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS03880 ff1c86cd4659bf301f5e051a276d10fe 163 Pfam PF00293 NUDIX domain 37 143 6.8E-17 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS03880 ff1c86cd4659bf301f5e051a276d10fe 163 SUPERFAMILY SSF55811 3 153 6.09E-30 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 2.2E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 2.2E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 2.2E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 2.2E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 2.2E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 25-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PANTHER PTHR10353:SF62 1 263 0.0 T 25-04-2016 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PANTHER PTHR10353:SF62 286 467 0.0 T 25-04-2016 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 1 468 65.935 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PANTHER PTHR10353 1 263 0.0 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 PANTHER PTHR10353 286 467 0.0 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 2 468 8.9E-274 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 Pfam PF00232 Glycosyl hydrolase family 1 2 465 3.8E-167 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 SUPERFAMILY SSF51445 2 466 4.99E-160 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS01065 bbbc41d92f97deda2c069850af247786 468 Gene3D G3DSA:3.20.20.80 3 465 1.2E-149 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 Gene3D G3DSA:3.60.10.10 1 274 6.2E-74 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 SUPERFAMILY SSF56219 1 274 5.1E-56 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 273 3.9E-56 T 25-04-2016 APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 250 3.3E-22 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 274 7.5E-81 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 234 245 - T 25-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APQ13_RS00375 f8d57c8afb1818b5955717042a0ff260 275 PANTHER PTHR22748 1 275 2.8E-82 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 PANTHER PTHR21599:SF0 1 368 6.8E-118 T 25-04-2016 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 PANTHER PTHR21599 1 368 6.8E-118 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 PIRSF PIRSF006078 1 369 7.0E-111 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 SUPERFAMILY SSF110738 1 368 2.22E-117 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 Gene3D G3DSA:3.90.1510.10 43 269 2.3E-66 T 25-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 Pfam PF02595 Glycerate kinase family 3 366 1.2E-118 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APQ13_RS02115 c660ffb8fa62d9d3ff8d9cec88a5429d 370 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 367 9.5E-125 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 SMART SM00382 71 242 4.5E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 18 341 1.8E-160 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 ProSitePatterns PS00321 recA signature. 227 235 - T 25-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PANTHER PTHR22942:SF1 5 353 5.8E-193 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 Gene3D G3DSA:3.40.50.300 40 285 2.5E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 SUPERFAMILY SSF52540 18 285 8.82E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 Pfam PF00154 recA bacterial DNA recombination protein 21 286 1.3E-138 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 SUPERFAMILY SSF54752 286 344 8.5E-20 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 Gene3D G3DSA:3.30.250.10 286 344 3.1E-26 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PANTHER PTHR22942 5 353 5.8E-193 T 25-04-2016 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PRINTS PR00142 RecA protein signature 179 208 2.1E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PRINTS PR00142 RecA protein signature 315 332 2.1E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PRINTS PR00142 RecA protein signature 224 252 2.1E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PRINTS PR00142 RecA protein signature 261 290 2.1E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PRINTS PR00142 RecA protein signature 107 136 2.1E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 PRINTS PR00142 RecA protein signature 141 170 2.1E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS08030 dafa32708cc7df609bd81bd63fbb9a4e 383 Hamap MF_00268 Protein RecA [recA]. 19 347 50.814 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APQ13_RS02270 460aaba1649212814b08f78132575c74 113 SUPERFAMILY SSF142906 3 111 1.31E-24 T 25-04-2016 APQ13_RS02270 460aaba1649212814b08f78132575c74 113 PANTHER PTHR35145 3 110 2.3E-17 T 25-04-2016 APQ13_RS02270 460aaba1649212814b08f78132575c74 113 Pfam PF04237 YjbR 14 107 4.4E-16 T 25-04-2016 IPR007351 Uncharacterised protein YjbR APQ13_RS03495 b38bab370da5fd2fd3317108bbb7c0be 218 PANTHER PTHR20855 17 218 1.9E-50 T 25-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APQ13_RS03495 b38bab370da5fd2fd3317108bbb7c0be 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 17 217 2.6E-59 T 25-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APQ13_RS03495 b38bab370da5fd2fd3317108bbb7c0be 218 Pfam PF03006 Haemolysin-III related 16 210 8.8E-29 T 25-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APQ13_RS03495 b38bab370da5fd2fd3317108bbb7c0be 218 PANTHER PTHR20855:SF3 17 218 1.9E-50 T 25-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 Gene3D G3DSA:1.20.1080.10 209 287 9.6E-77 T 25-04-2016 IPR023271 Aquaporin-like APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 Gene3D G3DSA:1.20.1080.10 3 176 9.6E-77 T 25-04-2016 IPR023271 Aquaporin-like APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 SUPERFAMILY SSF81338 5 169 1.22E-59 T 25-04-2016 IPR023271 Aquaporin-like APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 SUPERFAMILY SSF81338 202 288 1.22E-59 T 25-04-2016 IPR023271 Aquaporin-like APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 ProSitePatterns PS00221 MIP family signature. 67 75 - T 25-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PANTHER PTHR19139:SF147 9 168 1.2E-60 T 25-04-2016 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PANTHER PTHR19139:SF147 202 286 1.2E-60 T 25-04-2016 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 Pfam PF00230 Major intrinsic protein 7 169 8.2E-27 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 Pfam PF00230 Major intrinsic protein 207 280 6.8E-10 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PANTHER PTHR19139 9 168 1.2E-60 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PANTHER PTHR19139 202 286 1.2E-60 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.4E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PRINTS PR00783 Major intrinsic protein family signature 215 237 1.4E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.4E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PRINTS PR00783 Major intrinsic protein family signature 150 168 1.4E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.4E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS05945 1ea2185a1b2f69601417063741be756f 289 PRINTS PR00783 Major intrinsic protein family signature 266 286 1.4E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 Pfam PF00005 ABC transporter 333 450 8.4E-12 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 Pfam PF00005 ABC transporter 20 157 8.0E-18 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 SUPERFAMILY SSF52540 2 200 2.63E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 Gene3D G3DSA:3.40.50.300 1 245 7.7E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 SUPERFAMILY SSF52540 333 497 1.82E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 Gene3D G3DSA:3.40.50.300 333 498 8.6E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 SMART SM00382 339 501 2.7E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 SMART SM00382 28 203 1.1E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 PANTHER PTHR19211:SF64 278 494 2.1E-54 T 25-04-2016 APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 PANTHER PTHR19211:SF64 1 247 2.1E-54 T 25-04-2016 APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 PANTHER PTHR19211 278 494 2.1E-54 T 25-04-2016 APQ13_RS04095 e7359b82288e07a068dce3bde090b533 501 PANTHER PTHR19211 1 247 2.1E-54 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 8.0E-18 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 136 8.0E-18 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 8.0E-18 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 8.0E-18 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 262 8.0E-18 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 Gene3D G3DSA:3.50.50.60 134 254 2.6E-20 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PANTHER PTHR22912:SF158 1 326 1.2E-128 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 Hamap MF_01685 Ferredoxin--NADP reductase. 12 335 41.617 T 25-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 SUPERFAMILY SSF51905 13 320 1.79E-40 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 158 182 1.1E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 14 36 1.1E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 209 225 1.1E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 119 127 1.1E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 71 81 1.1E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 300 1.1E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 PANTHER PTHR22912 1 326 1.2E-128 T 25-04-2016 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 Gene3D G3DSA:3.50.50.60 255 333 1.1E-39 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 Gene3D G3DSA:3.50.50.60 10 133 1.1E-39 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS03795 43f23f3cf525d31cbbb5754e72c841de 337 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 307 1.4E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS02540 4c71cb0926c146b4a46e87b2dc7ad6d3 417 PIRSF PIRSF005850 1 417 3.3E-162 T 25-04-2016 IPR019219 Protein of unknown function DUF2130 APQ13_RS02540 4c71cb0926c146b4a46e87b2dc7ad6d3 417 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 146 404 3.3E-92 T 25-04-2016 IPR019219 Protein of unknown function DUF2130 APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 SUPERFAMILY SSF82282 2 367 1.31E-91 T 25-04-2016 IPR003726 Homocysteine-binding domain APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 Pfam PF02219 Methylenetetrahydrofolate reductase 322 591 5.8E-28 T 25-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 Gene3D G3DSA:3.20.20.220 325 610 3.3E-58 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 Gene3D G3DSA:3.20.20.330 2 324 7.1E-88 T 25-04-2016 IPR003726 Homocysteine-binding domain APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 PANTHER PTHR21091:SF122 11 360 1.2E-94 T 25-04-2016 APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 Pfam PF02574 Homocysteine S-methyltransferase 13 285 4.5E-53 T 25-04-2016 IPR003726 Homocysteine-binding domain APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 SUPERFAMILY SSF51730 323 608 5.1E-66 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like APQ13_RS03770 0697de7ba861e5a9c0c4a955843829ac 618 PANTHER PTHR21091 11 360 1.2E-94 T 25-04-2016 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 Gene3D G3DSA:3.40.1180.10 8 248 1.2E-96 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 247 6.9E-80 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 PANTHER PTHR10291 11 249 2.6E-122 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 SUPERFAMILY SSF64005 11 242 2.75E-89 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 193 210 - T 25-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 247 5.3E-84 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APQ13_RS09400 e531d1bd61927c2d3a446dfdf2edaefd 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 248 40.961 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APQ13_RS07100 f1a7c080034539328541b51443c6fde3 184 SUPERFAMILY SSF52218 3 178 1.35E-30 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS07100 f1a7c080034539328541b51443c6fde3 184 PANTHER PTHR30543:SF6 1 183 7.7E-38 T 25-04-2016 APQ13_RS07100 f1a7c080034539328541b51443c6fde3 184 Gene3D G3DSA:3.40.50.360 3 181 2.6E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS07100 f1a7c080034539328541b51443c6fde3 184 PANTHER PTHR30543 1 183 7.7E-38 T 25-04-2016 APQ13_RS07100 f1a7c080034539328541b51443c6fde3 184 Pfam PF03358 NADPH-dependent FMN reductase 4 145 6.3E-24 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 SMART SM00493 261 332 6.2E-17 T 25-04-2016 IPR006171 Toprim domain APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 TIGRFAM TIGR01391 dnaG: DNA primase 3 415 1.9E-139 T 25-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 254 6.2E-35 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Gene3D G3DSA:3.40.1360.10 243 363 2.5E-42 T 25-04-2016 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 PANTHER PTHR30313 1 566 4.2E-130 T 25-04-2016 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Pfam PF01807 CHC2 zinc finger 4 98 1.4E-36 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Gene3D G3DSA:3.90.580.10 4 96 4.4E-37 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 SUPERFAMILY SSF57783 3 95 2.89E-33 T 25-04-2016 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Gene3D G3DSA:3.90.980.10 112 242 4.7E-37 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Pfam PF13155 Toprim-like 264 347 1.2E-18 T 25-04-2016 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 PIRSF PIRSF002811 2 592 3.0E-172 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 SMART SM00400 34 88 6.7E-31 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 Hamap MF_00974 DNA primase [dnaG]. 2 582 27.103 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APQ13_RS04025 bd82dfa3c8ef44d4a2245bc2de758ecf 592 SUPERFAMILY SSF56731 113 424 9.55E-93 T 25-04-2016 APQ13_RS00205 1201575fd35e510e2bdedf4df6902e1c 307 Gene3D G3DSA:1.10.10.10 2 61 1.1E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00205 1201575fd35e510e2bdedf4df6902e1c 307 Pfam PF08279 HTH domain 5 58 5.9E-16 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 APQ13_RS00205 1201575fd35e510e2bdedf4df6902e1c 307 SUPERFAMILY SSF46785 2 58 6.68E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00205 1201575fd35e510e2bdedf4df6902e1c 307 PANTHER PTHR30595 1 202 7.7E-61 T 25-04-2016 APQ13_RS00205 1201575fd35e510e2bdedf4df6902e1c 307 PANTHER PTHR30595:SF5 1 202 7.7E-61 T 25-04-2016 APQ13_RS00205 1201575fd35e510e2bdedf4df6902e1c 307 Pfam PF13280 WYL domain 132 300 1.5E-27 T 25-04-2016 IPR026881 WYL domain APQ13_RS05830 7a1e1279ce1ca93c3f81865a3466087f 100 SUPERFAMILY SSF55315 5 99 2.36E-23 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS05830 7a1e1279ce1ca93c3f81865a3466087f 100 Gene3D G3DSA:3.30.1330.30 3 97 7.0E-20 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS05830 7a1e1279ce1ca93c3f81865a3466087f 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 95 5.4E-14 T 25-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PANTHER PTHR10133 2 878 0.0 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:1.10.150.20 193 253 1.7E-30 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Pfam PF00476 DNA polymerase family A 498 876 2.9E-152 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 729 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 825 838 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 774 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 811 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 741 752 5.0E-81 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 ProSitePatterns PS00447 DNA polymerase family A signature. 704 723 - T 25-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SUPERFAMILY SSF88723 3 177 1.64E-50 T 25-04-2016 IPR029060 PIN domain-like APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:3.30.70.370 611 660 1.1E-62 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:3.30.70.370 768 878 1.1E-62 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 177 3.7E-50 T 25-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SUPERFAMILY SSF53098 304 466 4.55E-30 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:1.20.1060.10 492 610 1.0E-36 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 PANTHER PTHR10133:SF27 2 878 0.0 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SUPERFAMILY SSF56672 470 878 2.33E-149 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SUPERFAMILY SSF47807 178 292 1.23E-33 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:3.30.420.10 304 490 9.8E-46 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:1.10.150.20 661 767 1.2E-38 T 25-04-2016 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SMART SM00279 180 215 2.3E-17 T 25-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SMART SM00475 5 269 1.1E-146 T 25-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 179 272 4.6E-33 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SMART SM00482 634 842 8.5E-116 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 SMART SM00474 288 466 2.5E-6 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 TIGRFAM TIGR00593 pola: DNA polymerase I 7 878 0.0 T 25-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APQ13_RS06405 97aa329b7a1d0868d59a1bd52a63a112 878 Gene3D G3DSA:3.40.50.1010 5 192 1.4E-67 T 25-04-2016 IPR029060 PIN domain-like APQ13_RS04625 cce6b0e563c41b17675f64c1e6bf186e 852 SUPERFAMILY SSF52540 266 455 8.45E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04625 cce6b0e563c41b17675f64c1e6bf186e 852 SUPERFAMILY SSF52540 125 233 8.45E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04625 cce6b0e563c41b17675f64c1e6bf186e 852 Gene3D G3DSA:3.40.50.300 241 434 1.5E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04625 cce6b0e563c41b17675f64c1e6bf186e 852 Gene3D G3DSA:3.40.50.300 137 207 1.5E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04625 cce6b0e563c41b17675f64c1e6bf186e 852 Pfam PF00350 Dynamin family 152 360 7.5E-27 T 25-04-2016 IPR022812 Dynamin superfamily APQ13_RS05110 11f3e55d13bd05d6dc14637b29e04003 243 PANTHER PTHR30249 1 243 8.3E-60 T 25-04-2016 APQ13_RS05110 11f3e55d13bd05d6dc14637b29e04003 243 Pfam PF04172 LrgB-like family 14 236 4.1E-58 T 25-04-2016 IPR007300 CidB/LrgB family APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 6.1E-80 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 25-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PANTHER PTHR13697:SF4 1 304 1.3E-122 T 25-04-2016 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 2.3E-122 T 25-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 SUPERFAMILY SSF53784 1 299 2.09E-105 T 25-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 Pfam PF00365 Phosphofructokinase 3 277 1.7E-105 T 25-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PIRSF PIRSF000532 1 323 5.4E-116 T 25-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 Gene3D G3DSA:3.40.50.450 1 208 1.9E-74 T 25-04-2016 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 PANTHER PTHR13697 1 304 1.3E-122 T 25-04-2016 APQ13_RS02400 943030e4b3b071fd9cbb7e827edf25ed 337 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 336 45.849 T 25-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 Pfam PF01926 50S ribosome-binding GTPase 8 122 5.2E-24 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 PANTHER PTHR11649:SF3 4 299 1.5E-124 T 25-04-2016 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 Gene3D G3DSA:3.40.50.300 7 188 3.1E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 SUPERFAMILY SSF54814 179 295 2.81E-42 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 277 4.1E-105 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 PANTHER PTHR11649 4 299 1.5E-124 T 25-04-2016 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 Pfam PF07650 KH domain 205 283 2.6E-24 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 Hamap MF_00367 GTPase Era [era]. 3 294 38.124 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 Gene3D G3DSA:3.30.300.20 189 289 1.7E-41 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 6.1E-33 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APQ13_RS00520 141be23ceb86de48421df7183ffce535 299 SUPERFAMILY SSF52540 8 203 7.65E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 2.1E-71 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 35.968 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 PANTHER PTHR23117:SF13 1 203 2.0E-91 T 25-04-2016 APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 Gene3D G3DSA:3.40.50.300 3 27 3.2E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 Gene3D G3DSA:3.40.50.300 88 203 3.2E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 25-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 Gene3D G3DSA:3.30.63.10 35 87 6.3E-27 T 25-04-2016 APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 PANTHER PTHR23117 1 203 2.0E-91 T 25-04-2016 APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 Pfam PF00625 Guanylate kinase 7 185 7.6E-50 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 SUPERFAMILY SSF52540 4 190 5.54E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05590 aff6dc13eaa44382f4c3fccf93f40c97 210 SMART SM00072 4 187 5.8E-69 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APQ13_RS00280 3e2aa38c76788ae26f030fbf2baa5c5d 289 PRINTS PR00173 Glutamate-aspartate symporter signature 47 72 2.5E-5 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APQ13_RS00280 3e2aa38c76788ae26f030fbf2baa5c5d 289 PRINTS PR00173 Glutamate-aspartate symporter signature 1 20 2.5E-5 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APQ13_RS00280 3e2aa38c76788ae26f030fbf2baa5c5d 289 PRINTS PR00173 Glutamate-aspartate symporter signature 177 199 2.5E-5 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APQ13_RS00280 3e2aa38c76788ae26f030fbf2baa5c5d 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 273 2.0E-47 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APQ13_RS00280 3e2aa38c76788ae26f030fbf2baa5c5d 289 PANTHER PTHR11795 1 289 6.4E-130 T 25-04-2016 APQ13_RS00280 3e2aa38c76788ae26f030fbf2baa5c5d 289 PANTHER PTHR11795:SF371 1 289 6.4E-130 T 25-04-2016 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 ProSitePatterns PS01244 Aconitase family signature 2. 390 403 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PANTHER PTHR11670 1 461 6.1E-215 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 SUPERFAMILY SSF53732 3 456 2.75E-154 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 Gene3D G3DSA:3.30.499.10 19 164 4.4E-21 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 457 54.622 T 25-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 Pfam PF00330 Aconitase family (aconitate hydratase) 8 448 4.6E-139 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 ProSitePatterns PS00450 Aconitase family signature 1. 330 346 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 Gene3D G3DSA:3.30.499.10 319 456 5.7E-56 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 Gene3D G3DSA:3.40.1060.10 168 279 6.8E-38 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 455 5.0E-196 T 25-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 133 148 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 82 95 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 390 403 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 195 208 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 209 222 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 108 116 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 119 132 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 284 298 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PRINTS PR00415 Aconitase family signature 334 345 3.1E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APQ13_RS01545 0cf20ffb63681b0fa4740791b486cf7f 461 PANTHER PTHR11670:SF12 1 461 6.1E-215 T 25-04-2016 APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 SUPERFAMILY SSF52151 194 290 3.66E-34 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 SUPERFAMILY SSF52151 2 133 3.66E-34 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 Gene3D G3DSA:3.40.366.10 2 128 1.1E-38 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 Gene3D G3DSA:3.40.366.10 193 291 1.1E-38 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 Pfam PF00698 Acyl transferase domain 4 303 1.3E-20 T 25-04-2016 IPR014043 Acyl transferase APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 PANTHER PTHR11712 2 288 6.6E-23 T 25-04-2016 APQ13_RS01705 361ff618db1c71f650a44de0ba34380b 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 301 2.7E-9 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 Gene3D G3DSA:2.30.30.40 41 110 8.0E-37 T 25-04-2016 APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 109 2.1E-51 T 25-04-2016 IPR004624 PhnA protein APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 Gene3D G3DSA:2.20.25.10 1 39 1.4E-22 T 25-04-2016 APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 Pfam PF08274 PhnA Zinc-Ribbon 2 30 8.9E-16 T 25-04-2016 IPR013987 PhnA protein, N-terminal APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 SUPERFAMILY SSF82057 38 109 9.16E-28 T 25-04-2016 APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 PANTHER PTHR30305 1 109 2.4E-81 T 25-04-2016 APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 Pfam PF03831 PhnA domain 44 109 8.2E-33 T 25-04-2016 IPR013988 PhnA protein, C-terminal APQ13_RS02445 177f54b1bf884a003efb50d95d025cf2 110 SUPERFAMILY SSF57783 1 37 6.46E-15 T 25-04-2016 APQ13_RS07630 64f2cfb4986f6ef378b4d991a31553a0 90 SMART SM00363 1 62 3.1E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07630 64f2cfb4986f6ef378b4d991a31553a0 90 Pfam PF01479 S4 domain 1 47 9.7E-8 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07630 64f2cfb4986f6ef378b4d991a31553a0 90 Gene3D G3DSA:3.10.290.10 1 84 8.5E-24 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APQ13_RS07630 64f2cfb4986f6ef378b4d991a31553a0 90 SUPERFAMILY SSF55174 1 79 4.84E-20 T 25-04-2016 APQ13_RS07630 64f2cfb4986f6ef378b4d991a31553a0 90 PIRSF PIRSF038881 1 89 3.0E-39 T 25-04-2016 IPR025490 RNA-binding protein, HP1423 type APQ13_RS09185 48778169c0929dc22dc483b26f12a92f 129 PANTHER PTHR34297 2 129 1.3E-31 T 25-04-2016 APQ13_RS09185 48778169c0929dc22dc483b26f12a92f 129 PANTHER PTHR34297:SF1 2 129 1.3E-31 T 25-04-2016 APQ13_RS09185 48778169c0929dc22dc483b26f12a92f 129 Pfam PF03780 Asp23 family, cell envelope-related function 7 108 9.4E-28 T 25-04-2016 IPR005531 Alkaline shock protein Asp23 APQ13_RS00645 97b239ac2493bb69d4eeb0337a9a3295 444 PANTHER PTHR12526 1 419 4.7E-93 T 25-04-2016 APQ13_RS00645 97b239ac2493bb69d4eeb0337a9a3295 444 Pfam PF13439 Glycosyltransferase Family 4 15 182 1.4E-29 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APQ13_RS00645 97b239ac2493bb69d4eeb0337a9a3295 444 PANTHER PTHR12526:SF363 1 419 4.7E-93 T 25-04-2016 APQ13_RS00645 97b239ac2493bb69d4eeb0337a9a3295 444 SUPERFAMILY SSF53756 1 376 1.1E-71 T 25-04-2016 APQ13_RS00645 97b239ac2493bb69d4eeb0337a9a3295 444 Gene3D G3DSA:3.40.50.2000 192 354 8.6E-24 T 25-04-2016 APQ13_RS00645 97b239ac2493bb69d4eeb0337a9a3295 444 Pfam PF00534 Glycosyl transferases group 1 193 343 2.4E-29 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 APQ13_RS08915 fe691ac2c0ae28770a2187f19cdbccfa 389 Pfam PF07261 Replication initiation and membrane attachment 259 326 7.7E-7 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 416 4.4E-60 T 25-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 144 7.2E-16 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Gene3D G3DSA:3.40.50.300 4 139 2.9E-27 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 PANTHER PTHR13779 5 404 5.1E-153 T 25-04-2016 APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Pfam PF16193 AAA C-terminal domain 173 251 5.1E-23 T 25-04-2016 IPR032423 AAA ATPase, C-terminal domain APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Gene3D G3DSA:1.20.272.10 233 330 3.7E-39 T 25-04-2016 APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Gene3D G3DSA:1.10.8.60 140 223 3.5E-13 T 25-04-2016 APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 SMART SM00382 38 150 2.2E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 Gene3D G3DSA:1.10.3710.10 331 419 3.4E-25 T 25-04-2016 APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 SUPERFAMILY SSF52540 4 207 1.9E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 PANTHER PTHR13779:SF7 5 404 5.1E-153 T 25-04-2016 APQ13_RS08255 5dcfd07ad2713730bc4167b5f5fbab9b 421 SUPERFAMILY SSF48019 237 418 1.13E-65 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APQ13_RS02880 767d91967a8daead4549e0218e1ecbf6 196 PANTHER PTHR17490 2 189 3.6E-57 T 25-04-2016 APQ13_RS02880 767d91967a8daead4549e0218e1ecbf6 196 Pfam PF01300 Telomere recombination 6 180 8.5E-45 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 APQ13_RS02880 767d91967a8daead4549e0218e1ecbf6 196 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 188 1.9E-44 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 APQ13_RS02880 767d91967a8daead4549e0218e1ecbf6 196 Gene3D G3DSA:3.90.870.10 2 192 6.6E-57 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APQ13_RS02880 767d91967a8daead4549e0218e1ecbf6 196 SUPERFAMILY SSF55821 3 192 9.16E-53 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APQ13_RS04510 4d86eb9d80e49f1bf8c4d6310d8b6a0c 129 Pfam PF14478 Domain of unknown function (DUF4430) 58 123 2.4E-21 T 25-04-2016 IPR027954 Domain of unknown function DUF4430 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 Pfam PF08455 Bacterial SNF2 helicase associated 215 577 3.4E-64 T 25-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 SUPERFAMILY SSF52540 783 1028 2.01E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 SUPERFAMILY SSF52540 570 781 8.14E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 SMART SM00487 581 762 6.1E-31 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 Pfam PF00271 Helicase conserved C-terminal domain 862 973 2.1E-21 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 Pfam PF00176 SNF2 family N-terminal domain 602 852 2.0E-40 T 25-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799:SF651 572 1028 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799:SF651 93 100 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799:SF651 8 74 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799:SF651 295 369 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 SMART SM00490 891 973 1.0E-21 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 Gene3D G3DSA:3.40.50.300 855 1008 1.6E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 Gene3D G3DSA:3.40.50.300 580 748 7.1E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799 572 1028 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799 93 100 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799 8 74 2.4E-238 T 25-04-2016 APQ13_RS09685 e6680aeee22b1a79340c15e217e8a2b3 1030 PANTHER PTHR10799 295 369 2.4E-238 T 25-04-2016 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 SUPERFAMILY SSF53850 37 305 3.58E-66 T 25-04-2016 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 302 4.1E-55 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 Gene3D G3DSA:3.40.190.120 145 244 1.2E-35 T 25-04-2016 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 PANTHER PTHR30177:SF9 1 306 5.6E-111 T 25-04-2016 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 PANTHER PTHR30177 1 306 5.6E-111 T 25-04-2016 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 Gene3D G3DSA:3.40.190.10 33 144 2.2E-45 T 25-04-2016 APQ13_RS07875 a8c648fb146ffd78da36cf3e0dbe8279 311 Gene3D G3DSA:3.40.190.10 256 306 2.2E-45 T 25-04-2016 APQ13_RS03630 a042dbb802c6d8ef54f2ab0056770450 306 PANTHER PTHR36838 3 304 2.6E-16 T 25-04-2016 APQ13_RS03630 a042dbb802c6d8ef54f2ab0056770450 306 Pfam PF03547 Membrane transport protein 7 147 5.1E-10 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APQ13_RS03630 a042dbb802c6d8ef54f2ab0056770450 306 Pfam PF03547 Membrane transport protein 153 296 4.6E-12 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 PANTHER PTHR10366:SF39 2 332 8.7E-111 T 25-04-2016 APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 SUPERFAMILY SSF51735 1 329 4.29E-93 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 Gene3D G3DSA:3.90.25.10 256 331 1.9E-46 T 25-04-2016 APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 Gene3D G3DSA:3.90.25.10 173 224 1.9E-46 T 25-04-2016 APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 328 1.1E-125 T 25-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 254 6.3E-59 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 Gene3D G3DSA:3.40.50.720 1 172 2.7E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03700 81d85a58f26d7509ae69e25617365576 333 PANTHER PTHR10366 2 332 8.7E-111 T 25-04-2016 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 PANTHER PTHR30346:SF0 1 292 5.0E-45 T 25-04-2016 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 PANTHER PTHR30346 1 292 5.0E-45 T 25-04-2016 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 SUPERFAMILY SSF46785 1 86 2.07E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 Gene3D G3DSA:3.40.190.10 98 202 2.8E-11 T 25-04-2016 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 Gene3D G3DSA:1.10.10.10 1 81 3.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 SUPERFAMILY SSF53850 98 294 4.5E-16 T 25-04-2016 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.9E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS03875 463febb68eb55d52abed11c3cc5e30eb 301 Pfam PF03466 LysR substrate binding domain 99 290 1.5E-11 T 25-04-2016 IPR005119 LysR, substrate-binding APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 SUPERFAMILY SSF52540 5 220 7.21E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 PANTHER PTHR24220:SF0 6 234 1.6E-87 T 25-04-2016 APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 SMART SM00382 29 217 2.1E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 PANTHER PTHR24220 6 234 1.6E-87 T 25-04-2016 APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 Pfam PF00005 ABC transporter 20 161 8.7E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS06690 a7d9ef469f99788c88a9aa55befabb42 239 Gene3D G3DSA:3.40.50.300 2 221 2.9E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 161 2.4E-39 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 130 140 - T 25-04-2016 IPR020549 Endoribonuclease YbeY, conserved site APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 164 21.811 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 Pfam PF02130 Uncharacterized protein family UPF0054 12 159 1.9E-40 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 SUPERFAMILY SSF55486 2 163 1.39E-39 T 25-04-2016 APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 Gene3D G3DSA:3.40.390.30 6 163 8.6E-44 T 25-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APQ13_RS00510 7f478b971de8217d93bb094d11799127 164 PANTHER PTHR22881 37 164 2.6E-37 T 25-04-2016 APQ13_RS01015 d5cba5762284e635a50aba2d8134ecd9 81 Pfam PF03083 Sugar efflux transporter for intercellular exchange 3 75 4.2E-7 T 25-04-2016 IPR004316 SWEET sugar transporter GO:0016021 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 5.8E-34 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 5.8E-34 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 5.8E-34 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 5.8E-34 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 SUPERFAMILY SSF52943 4 291 4.19E-84 T 25-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 Pfam PF00231 ATP synthase 4 291 1.5E-82 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 291 31.812 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 Gene3D G3DSA:1.10.287.80 20 61 3.5E-26 T 25-04-2016 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 Gene3D G3DSA:1.10.287.80 206 239 3.5E-26 T 25-04-2016 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 PANTHER PTHR11693 4 292 5.6E-93 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 291 2.3E-95 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 25-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 Gene3D G3DSA:3.40.1380.10 68 195 1.7E-38 T 25-04-2016 APQ13_RS00915 3dd636eaa0fb48e09f096044cea34edf 292 Gene3D G3DSA:1.10.287.80 240 286 7.3E-26 T 25-04-2016 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 330 4.8E-26 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 PANTHER PTHR18968:SF129 10 557 7.9E-265 T 25-04-2016 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 SUPERFAMILY SSF52467 189 355 1.37E-34 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 Gene3D G3DSA:3.40.50.1220 190 352 5.4E-33 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 174 1.3E-47 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 Gene3D G3DSA:3.40.50.970 10 180 3.7E-58 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 PANTHER PTHR18968 10 557 7.9E-265 T 25-04-2016 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 Gene3D G3DSA:3.40.50.970 366 549 1.9E-60 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 550 3.6E-276 T 25-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 SUPERFAMILY SSF52518 10 179 3.45E-47 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 539 3.8E-42 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 SUPERFAMILY SSF52518 366 549 1.87E-58 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS01235 36a9a1efed5c73a1611690589972a34e 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 25-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 PANTHER PTHR30290:SF10 1 547 1.9E-126 T 25-04-2016 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 SUPERFAMILY SSF53850 34 539 5.34E-109 T 25-04-2016 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 PIRSF PIRSF002741 5 549 2.6E-83 T 25-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 Gene3D G3DSA:3.10.105.10 298 519 4.1E-40 T 25-04-2016 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 Gene3D G3DSA:3.90.76.10 48 224 5.6E-44 T 25-04-2016 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 PANTHER PTHR30290 1 547 1.9E-126 T 25-04-2016 APQ13_RS06615 1c2c46514503038e9aa1754727cbaaf1 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 469 2.2E-72 T 25-04-2016 IPR000914 Solute-binding protein family 5 domain APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 SUPERFAMILY SSF51726 385 741 2.09E-106 T 25-04-2016 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 742 33.011 T 25-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 Gene3D G3DSA:3.20.20.210 5 365 2.1E-118 T 25-04-2016 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 308 8.0E-109 T 25-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 PANTHER PTHR30519:SF0 1 745 0.0 T 25-04-2016 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 742 0.0 T 25-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 415 737 2.0E-138 T 25-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 SUPERFAMILY SSF51726 6 364 1.96E-88 T 25-04-2016 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 PIRSF PIRSF000382 1 745 1.3E-302 T 25-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 Gene3D G3DSA:3.20.20.210 384 743 1.6E-118 T 25-04-2016 APQ13_RS03775 6f01c923f67d8ea94fe6cc9bc519e904 745 PANTHER PTHR30519 1 745 0.0 T 25-04-2016 APQ13_RS07430 ac5d9594f30db5bd8284c275aa01dde1 206 Pfam PF08713 DNA alkylation repair enzyme 27 180 7.3E-15 T 25-04-2016 IPR014825 DNA alkylation repair enzyme APQ13_RS07430 ac5d9594f30db5bd8284c275aa01dde1 206 Gene3D G3DSA:1.25.10.10 49 177 4.8E-10 T 25-04-2016 IPR011989 Armadillo-like helical APQ13_RS07430 ac5d9594f30db5bd8284c275aa01dde1 206 SUPERFAMILY SSF48371 25 202 3.84E-35 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 APQ13_RS08065 1863c36150d4240f56ed045969d95cc2 99 PANTHER PTHR40066 1 99 8.0E-26 T 25-04-2016 APQ13_RS08065 1863c36150d4240f56ed045969d95cc2 99 PANTHER PTHR40066:SF1 1 99 8.0E-26 T 25-04-2016 APQ13_RS08065 1863c36150d4240f56ed045969d95cc2 99 Pfam PF06949 Protein of unknown function (DUF1292) 17 97 8.5E-15 T 25-04-2016 IPR009711 Uncharacterised protein family UPF0473 APQ13_RS08065 1863c36150d4240f56ed045969d95cc2 99 Hamap MF_01448 UPF0473 protein . 8 98 21.737 T 25-04-2016 IPR009711 Uncharacterised protein family UPF0473 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 Pfam PF01409 tRNA synthetases class II core domain (F) 97 346 2.2E-106 T 25-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 Gene3D G3DSA:3.30.930.10 22 347 1.2E-130 T 25-04-2016 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 SUPERFAMILY SSF46589 24 103 1.62E-18 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 SUPERFAMILY SSF55681 97 346 4.59E-82 T 25-04-2016 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 14 346 46.321 T 25-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 43 346 7.9E-105 T 25-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 26 92 2.7E-22 T 25-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APQ13_RS00995 72eafe00b75d4fe94ecc29bca3540322 347 PANTHER PTHR11538 97 346 1.1E-108 T 25-04-2016 APQ13_RS03160 021e23fdc9f938f01ed7fe30cde53566 467 PANTHER PTHR10283:SF87 1 461 1.4E-105 T 25-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 APQ13_RS03160 021e23fdc9f938f01ed7fe30cde53566 467 TIGRFAM TIGR00784 citMHS: citrate transporter 68 461 6.4E-117 T 25-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 APQ13_RS03160 021e23fdc9f938f01ed7fe30cde53566 467 PANTHER PTHR10283 1 461 1.4E-105 T 25-04-2016 APQ13_RS03160 021e23fdc9f938f01ed7fe30cde53566 467 Pfam PF03600 Citrate transporter 14 409 4.9E-48 T 25-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 Gene3D G3DSA:3.30.300.20 1 115 1.1E-38 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 116 22.037 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 25-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 Pfam PF02033 Ribosome-binding factor A 5 109 6.8E-31 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 96 2.0E-45 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 PANTHER PTHR33515 1 116 1.5E-41 T 25-04-2016 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 6.0E-32 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APQ13_RS05820 3ef7e1d78276a4a85ca09be232f04ed4 116 SUPERFAMILY SSF89919 1 112 4.84E-31 T 25-04-2016 IPR023799 Ribosome-binding factor A domain APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PANTHER PTHR11946:SF5 1 790 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PANTHER PTHR11946:SF5 810 872 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 4.9E-16 T 25-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 SUPERFAMILY SSF47323 571 829 1.14E-66 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 560 1.1E-213 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Gene3D G3DSA:1.10.730.10 560 745 1.9E-56 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Gene3D G3DSA:3.90.740.10 197 339 1.1E-49 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 SUPERFAMILY SSF46589 814 878 5.02E-15 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 SUPERFAMILY SSF50677 193 344 1.7E-61 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 861 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 879 15.694 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 SUPERFAMILY SSF52374 4 195 1.28E-140 T 25-04-2016 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 SUPERFAMILY SSF52374 343 570 1.28E-140 T 25-04-2016 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Gene3D G3DSA:3.40.50.620 343 559 2.7E-139 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Gene3D G3DSA:3.40.50.620 8 196 2.7E-139 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Gene3D G3DSA:1.10.287.380 807 867 1.2E-4 T 25-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 Pfam PF08264 Anticodon-binding domain of tRNA 610 754 3.2E-41 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PANTHER PTHR11946 1 790 0.0 T 25-04-2016 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PANTHER PTHR11946 810 872 0.0 T 25-04-2016 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 2.3E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 2.3E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 2.3E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 2.3E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS09530 c56b1fc7692f66533d67e2d9a3cf8945 886 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 2.3E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 Gene3D G3DSA:3.30.70.250 126 187 5.9E-8 T 25-04-2016 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 PANTHER PTHR10982 6 284 5.9E-46 T 25-04-2016 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 Gene3D G3DSA:3.40.366.10 194 285 1.5E-39 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 Gene3D G3DSA:3.40.366.10 2 121 1.5E-39 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 Pfam PF00698 Acyl transferase domain 44 220 1.0E-9 T 25-04-2016 IPR014043 Acyl transferase APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 PANTHER PTHR10982:SF13 6 284 5.9E-46 T 25-04-2016 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 289 6.6E-10 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 SUPERFAMILY SSF55048 128 193 2.09E-9 T 25-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 SUPERFAMILY SSF52151 2 127 7.85E-42 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APQ13_RS01665 bf298107cab7986fa89a81490d0c2000 401 SUPERFAMILY SSF52151 196 291 7.85E-42 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APQ13_RS05205 455786c7d5cdf387ec646976568093e7 223 Gene3D G3DSA:3.20.20.10 2 222 8.3E-72 T 25-04-2016 IPR029066 PLP-binding barrel APQ13_RS05205 455786c7d5cdf387ec646976568093e7 223 SUPERFAMILY SSF51419 1 222 1.19E-66 T 25-04-2016 IPR029066 PLP-binding barrel APQ13_RS05205 455786c7d5cdf387ec646976568093e7 223 PIRSF PIRSF004848 1 223 1.0E-61 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 APQ13_RS05205 455786c7d5cdf387ec646976568093e7 223 Pfam PF01168 Alanine racemase, N-terminal domain 28 222 1.4E-15 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APQ13_RS05205 455786c7d5cdf387ec646976568093e7 223 PANTHER PTHR10146 1 222 1.9E-73 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 APQ13_RS05205 455786c7d5cdf387ec646976568093e7 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 223 3.0E-49 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 SUPERFAMILY SSF52540 3 198 1.03E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01530 909645442709ba3040404f3ed973b575 209 Gene3D G3DSA:3.40.50.300 4 206 4.7E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PRINTS PR00988 Uridine kinase signature 150 161 1.51E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PRINTS PR00988 Uridine kinase signature 5 22 1.51E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PRINTS PR00988 Uridine kinase signature 35 46 1.51E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PRINTS PR00988 Uridine kinase signature 136 146 1.51E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PRINTS PR00988 Uridine kinase signature 172 185 1.51E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PRINTS PR00988 Uridine kinase signature 80 95 1.51E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 PANTHER PTHR10285 3 207 3.6E-90 T 25-04-2016 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 TIGRFAM TIGR00235 udk: uridine kinase 3 205 6.4E-87 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 7.3E-46 T 25-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APQ13_RS01530 909645442709ba3040404f3ed973b575 209 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.34 T 25-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APQ13_RS00980 0f2814fd9be934d54dcf0bc6708ff113 267 SUPERFAMILY SSF56281 12 239 5.5E-45 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS00980 0f2814fd9be934d54dcf0bc6708ff113 267 PANTHER PTHR13754 1 265 4.5E-99 T 25-04-2016 APQ13_RS00980 0f2814fd9be934d54dcf0bc6708ff113 267 SMART SM00849 16 221 6.8E-13 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS00980 0f2814fd9be934d54dcf0bc6708ff113 267 Gene3D G3DSA:3.60.15.10 9 250 1.4E-41 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS00980 0f2814fd9be934d54dcf0bc6708ff113 267 PANTHER PTHR13754:SF15 1 265 4.5E-99 T 25-04-2016 APQ13_RS00980 0f2814fd9be934d54dcf0bc6708ff113 267 Pfam PF12706 Beta-lactamase superfamily domain 28 213 7.1E-22 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS07095 68a0cd6648414f08ca75b9ebfb96930f 320 Pfam PF00676 Dehydrogenase E1 component 13 310 7.9E-85 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APQ13_RS07095 68a0cd6648414f08ca75b9ebfb96930f 320 PANTHER PTHR11516 1 320 2.6E-133 T 25-04-2016 APQ13_RS07095 68a0cd6648414f08ca75b9ebfb96930f 320 SUPERFAMILY SSF52518 3 320 6.08E-98 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS07095 68a0cd6648414f08ca75b9ebfb96930f 320 Gene3D G3DSA:3.40.50.970 2 319 7.8E-124 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 Pfam PF13353 4Fe-4S single cluster domain 30 168 1.2E-52 T 25-04-2016 APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 Gene3D G3DSA:3.80.30.10 83 195 8.3E-17 T 25-04-2016 APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 21 170 6.6E-60 T 25-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 PIRSF PIRSF000368 11 185 3.6E-70 T 25-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 PANTHER PTHR30352:SF2 1 201 1.6E-100 T 25-04-2016 APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 SUPERFAMILY SSF102114 43 116 2.55E-8 T 25-04-2016 APQ13_RS08095 4a38416415b79ebc0d637f23bbd9c165 201 PANTHER PTHR30352 1 201 1.6E-100 T 25-04-2016 APQ13_RS03980 3cb4d03b59c775a7283236f83a10f342 583 Pfam PF05045 Rhamnan synthesis protein F 34 515 3.1E-186 T 25-04-2016 IPR007739 Rhamnan synthesis F APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 178 6.1E-20 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 172 2.0E-9 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 SUPERFAMILY SSF56784 4 182 1.23E-35 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 Gene3D G3DSA:3.40.50.1000 83 181 3.6E-28 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 Gene3D G3DSA:3.40.50.1000 4 18 3.6E-28 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 PANTHER PTHR18901 10 178 2.4E-19 T 25-04-2016 APQ13_RS01950 4c4bcb90d263de2ec274829c6928f40a 194 Gene3D G3DSA:1.10.150.240 19 82 2.3E-27 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APQ13_RS08135 78028ec0860a1481141362d7824035dc 217 Pfam PF16305 Domain of unknown function (DUF4947) 50 216 7.4E-77 T 25-04-2016 IPR032542 Protein of unknown function DUF4947 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 174 232 8.0E-17 T 25-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 Pfam PF01743 Poly A polymerase head domain 27 147 1.1E-35 T 25-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 PANTHER PTHR13734 12 229 7.8E-69 T 25-04-2016 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 SUPERFAMILY SSF81891 145 398 1.96E-56 T 25-04-2016 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 SUPERFAMILY SSF81301 10 144 7.52E-41 T 25-04-2016 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 Gene3D G3DSA:1.10.3090.10 148 367 3.0E-51 T 25-04-2016 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 Gene3D G3DSA:3.30.460.10 11 147 3.2E-45 T 25-04-2016 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 Hamap MF_01263 CCA-adding enzyme [cca]. 7 400 42.596 T 25-04-2016 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 APQ13_RS03655 b0e74cc5b48577b18d50ac021babab95 401 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 250 396 8.6E-49 T 25-04-2016 IPR032810 CCA-adding enzyme, C-terminal APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 Gene3D G3DSA:3.40.50.300 6 241 3.2E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 SMART SM00382 30 216 1.9E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 PANTHER PTHR24220:SF327 7 245 2.4E-139 T 25-04-2016 APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 PIRSF PIRSF039085 2 245 7.1E-116 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 Pfam PF00005 ABC transporter 21 169 8.9E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 SUPERFAMILY SSF52540 6 239 1.24E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04090 7d16672ff7608d87be6497aa230ff482 246 PANTHER PTHR24220 7 245 2.4E-139 T 25-04-2016 APQ13_RS02225 58662c7c5738b04b0913403cc3b8a471 236 SUPERFAMILY SSF52317 20 200 3.06E-34 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS02225 58662c7c5738b04b0913403cc3b8a471 236 PANTHER PTHR11922:SF11 22 204 3.9E-37 T 25-04-2016 APQ13_RS02225 58662c7c5738b04b0913403cc3b8a471 236 Pfam PF00117 Glutamine amidotransferase class-I 34 185 7.9E-15 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APQ13_RS02225 58662c7c5738b04b0913403cc3b8a471 236 PANTHER PTHR11922 22 204 3.9E-37 T 25-04-2016 APQ13_RS02225 58662c7c5738b04b0913403cc3b8a471 236 Gene3D G3DSA:3.40.50.880 1 231 3.5E-46 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS00945 6ece48e68f93029cb28cc33f5eaf37fb 293 SMART SM00892 115 292 9.4E-26 T 25-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APQ13_RS00945 6ece48e68f93029cb28cc33f5eaf37fb 293 Pfam PF01223 DNA/RNA non-specific endonuclease 104 251 2.2E-15 T 25-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APQ13_RS00945 6ece48e68f93029cb28cc33f5eaf37fb 293 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 177 185 - T 25-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 APQ13_RS00070 035734c707ea0a05a62457b9c11f9088 245 Gene3D G3DSA:1.10.150.130 4 78 1.0E-5 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal APQ13_RS00070 035734c707ea0a05a62457b9c11f9088 245 Hamap MF_01817 Tyrosine recombinase XerD-like. 1 243 37.27 T 25-04-2016 IPR020876 Tyrosine recombinase XerD-like GO:0005737 APQ13_RS00070 035734c707ea0a05a62457b9c11f9088 245 SUPERFAMILY SSF56349 7 243 7.06E-12 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APQ13_RS00070 035734c707ea0a05a62457b9c11f9088 245 Gene3D G3DSA:1.10.443.10 109 244 2.8E-10 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APQ13_RS09350 65fe46e3cd16427d036d941ccafc2d8c 197 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 18 188 7.7E-46 T 25-04-2016 IPR005249 Conserved hypothetical protein CHP00488 APQ13_RS09350 65fe46e3cd16427d036d941ccafc2d8c 197 SUPERFAMILY SSF109604 6 189 4.4E-30 T 25-04-2016 APQ13_RS09350 65fe46e3cd16427d036d941ccafc2d8c 197 SMART SM00471 22 149 3.7E-5 T 25-04-2016 IPR003607 HD/PDEase domain APQ13_RS09350 65fe46e3cd16427d036d941ccafc2d8c 197 PANTHER PTHR35795 3 197 1.3E-63 T 25-04-2016 APQ13_RS09350 65fe46e3cd16427d036d941ccafc2d8c 197 Pfam PF01966 HD domain 26 138 3.3E-10 T 25-04-2016 IPR006674 HD domain APQ13_RS09350 65fe46e3cd16427d036d941ccafc2d8c 197 Gene3D G3DSA:1.10.3210.10 3 192 4.3E-64 T 25-04-2016 IPR006674 HD domain APQ13_RS04955 13822acac4b993554a4367b878671778 1566 SUPERFAMILY SSF74914 464 840 7.98E-149 T 25-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Gene3D G3DSA:1.20.5.250 464 495 5.3E-20 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PRINTS PR01217 Proline rich extensin signature 880 896 2.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PRINTS PR01217 Proline rich extensin signature 851 872 2.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PRINTS PR01217 Proline rich extensin signature 929 954 2.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PRINTS PR01217 Proline rich extensin signature 898 915 2.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PRINTS PR01217 Proline rich extensin signature 836 848 2.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF16364 Cell surface antigen C-terminus 1290 1478 1.4E-26 T 25-04-2016 IPR032300 Cell surface antigen, C-terminal APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF00746 Gram positive anchor 1526 1562 8.8E-6 T 25-04-2016 IPR019948 Gram-positive anchor APQ13_RS04955 13822acac4b993554a4367b878671778 1566 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1532 1566 3.6E-5 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain APQ13_RS04955 13822acac4b993554a4367b878671778 1566 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 1159 1332 2.1E-66 T 25-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PANTHER PTHR13140 126 180 3.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 PANTHER PTHR13140 203 497 3.2E-16 T 25-04-2016 APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF08363 Glucan-binding protein C 492 820 2.6E-108 T 25-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain APQ13_RS04955 13822acac4b993554a4367b878671778 1566 TIGRFAM TIGR03726 strep_RK_lipo: putative cross-wall-targeting lipoprotein signal 7 40 3.6E-16 T 25-04-2016 IPR021197 Cross-wall-targeting lipoprotein motif APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 365 389 2.1E-7 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 390 414 7.7E-11 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 201 225 2.3E-9 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 308 332 7.9E-11 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 283 307 2.3E-8 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 447 470 3.6E-9 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS04955 13822acac4b993554a4367b878671778 1566 Pfam PF06696 Streptococcal surface antigen repeat 226 250 1.7E-6 T 25-04-2016 IPR009578 Cell surface antigen repeat APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 SUPERFAMILY SSF56808 6 226 3.14E-84 T 25-04-2016 IPR023674 Ribosomal protein L1-like APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 PANTHER PTHR23105 21 229 3.1E-81 T 25-04-2016 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 4.2E-52 T 25-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 Gene3D G3DSA:3.30.190.20 17 68 8.8E-45 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 Gene3D G3DSA:3.30.190.20 161 226 8.8E-45 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 PANTHER PTHR23105:SF5 21 229 3.1E-81 T 25-04-2016 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 Gene3D G3DSA:3.40.50.790 69 159 2.3E-44 T 25-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.898 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.7E-103 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 PIRSF PIRSF002155 1 227 3.7E-80 T 25-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APQ13_RS00475 b182b968c4497888520bfe1449bae19f 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 25-04-2016 IPR023673 Ribosomal protein L1, conserved site APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 PANTHER PTHR26402:SF578 3 229 1.6E-88 T 25-04-2016 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.5E-26 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 SUPERFAMILY SSF52172 3 125 2.56E-37 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 Gene3D G3DSA:3.40.50.2300 3 123 7.3E-38 T 25-04-2016 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 SUPERFAMILY SSF46894 128 227 1.33E-29 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 Gene3D G3DSA:1.10.10.10 130 228 1.1E-32 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 SMART SM00862 151 226 1.6E-25 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 Pfam PF00072 Response regulator receiver domain 5 114 4.7E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 PANTHER PTHR26402 3 229 1.6E-88 T 25-04-2016 APQ13_RS08905 f77a6c102280c3f8a68dc081d429324c 230 SMART SM00448 3 113 1.2E-39 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS04415 45f4de6dca3f244a4ae09e6fe38be1d0 65 Gene3D G3DSA:2.10.260.10 11 47 2.6E-6 T 25-04-2016 APQ13_RS04415 45f4de6dca3f244a4ae09e6fe38be1d0 65 SUPERFAMILY SSF89447 10 50 5.06E-7 T 25-04-2016 APQ13_RS04415 45f4de6dca3f244a4ae09e6fe38be1d0 65 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 12 47 1.7E-7 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 Gene3D G3DSA:3.40.50.720 173 286 3.7E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 PANTHER PTHR11695 12 347 1.9E-122 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 SUPERFAMILY SSF50129 1 174 1.95E-42 T 25-04-2016 IPR011032 GroES-like APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 Gene3D G3DSA:3.90.180.10 1 172 4.3E-42 T 25-04-2016 IPR011032 GroES-like APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 Pfam PF00107 Zinc-binding dehydrogenase 181 281 2.0E-20 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 SMART SM00829 10 345 0.006 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 PANTHER PTHR11695:SF601 12 347 1.9E-122 T 25-04-2016 APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 125 4.0E-22 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 SUPERFAMILY SSF51735 149 311 1.26E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09095 59320c7de35c38d1956a5c510157b2b3 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 4.3E-30 T 25-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 Gene3D G3DSA:3.40.47.10 160 324 5.3E-47 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 PANTHER PTHR18919:SF109 27 324 1.1E-114 T 25-04-2016 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 Gene3D G3DSA:3.40.47.10 4 159 9.5E-61 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 PANTHER PTHR18919 27 324 1.1E-114 T 25-04-2016 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 325 1.6E-32 T 25-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 SUPERFAMILY SSF53901 2 324 1.65E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 324 1.9E-107 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APQ13_RS09630 b43b57b655aa7a3c01f0344960b1e393 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 325 66.776 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APQ13_RS01450 14844b9af4b209eddcfd40a972faab35 220 TIGRFAM TIGR01866 cas_Csn2: CRISPR type II-A/NMEMI-associated protein Csn2 2 215 6.9E-49 T 25-04-2016 IPR010146 CRISPR-associated protein, Csn2-type APQ13_RS01450 14844b9af4b209eddcfd40a972faab35 220 Pfam PF09711 CRISPR-associated protein (Cas_Csn2) 37 212 1.1E-69 T 25-04-2016 IPR010146 CRISPR-associated protein, Csn2-type APQ13_RS02110 62e8a780f3e09aa26420e2c4a38a89a5 141 SUPERFAMILY SSF55729 12 139 2.49E-21 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS02110 62e8a780f3e09aa26420e2c4a38a89a5 141 Gene3D G3DSA:3.40.630.30 39 138 1.6E-20 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS02110 62e8a780f3e09aa26420e2c4a38a89a5 141 Pfam PF13673 Acetyltransferase (GNAT) domain 18 123 1.5E-13 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS03255 65f517c6f5e5fe87422bde51baaa3c4e 260 SUPERFAMILY SSF53098 60 258 2.73E-66 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS03255 65f517c6f5e5fe87422bde51baaa3c4e 260 Hamap MF_00052_B Ribonuclease HII [rnhB]. 71 252 34.15 T 25-04-2016 IPR022898 Ribonuclease HII GO:0004523 APQ13_RS03255 65f517c6f5e5fe87422bde51baaa3c4e 260 PANTHER PTHR10954:SF7 2 259 8.6E-97 T 25-04-2016 APQ13_RS03255 65f517c6f5e5fe87422bde51baaa3c4e 260 PANTHER PTHR10954 2 259 8.6E-97 T 25-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APQ13_RS03255 65f517c6f5e5fe87422bde51baaa3c4e 260 Pfam PF01351 Ribonuclease HII 73 250 3.4E-33 T 25-04-2016 IPR024567 Ribonuclease HII/HIII domain APQ13_RS03255 65f517c6f5e5fe87422bde51baaa3c4e 260 Gene3D G3DSA:3.30.420.10 71 213 1.1E-43 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 SUPERFAMILY SSF52540 293 514 6.34E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 Gene3D G3DSA:3.40.50.300 132 281 8.5E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 Gene3D G3DSA:3.40.50.300 3 100 8.5E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 PANTHER PTHR19211 1 534 0.0 T 25-04-2016 APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 PANTHER PTHR19211:SF38 1 534 0.0 T 25-04-2016 APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 SMART SM00382 344 512 2.5 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 SMART SM00382 26 228 2.9E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 Pfam PF12848 ABC transporter 224 306 7.0E-21 T 25-04-2016 IPR032781 ABC-transporter extension domain APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 Gene3D G3DSA:3.40.50.300 317 534 2.2E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 Pfam PF00005 ABC transporter 18 184 6.0E-24 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 Pfam PF00005 ABC transporter 335 467 9.9E-14 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 SUPERFAMILY SSF52540 125 250 4.5E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07705 832b1558db7d2e957df178d895ecbd8b 539 SUPERFAMILY SSF52540 2 92 4.5E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03245 742c830a2532fcd2f28b46a5969a9edd 323 PANTHER PTHR30472 28 323 9.0E-110 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APQ13_RS03245 742c830a2532fcd2f28b46a5969a9edd 323 SUPERFAMILY SSF81345 9 318 1.57E-57 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS03245 742c830a2532fcd2f28b46a5969a9edd 323 PANTHER PTHR30472:SF19 28 323 9.0E-110 T 25-04-2016 APQ13_RS03245 742c830a2532fcd2f28b46a5969a9edd 323 Pfam PF01032 FecCD transport family 33 318 1.8E-52 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APQ13_RS03245 742c830a2532fcd2f28b46a5969a9edd 323 Gene3D G3DSA:1.10.3470.10 30 321 1.4E-56 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS02215 a954fed8070e1c17d889f9265eb3161a 158 Pfam PF07799 Protein of unknown function (DUF1643) 18 146 4.2E-48 T 25-04-2016 IPR012441 Protein of unknown function DUF1643 APQ13_RS02215 a954fed8070e1c17d889f9265eb3161a 158 PIRSF PIRSF032209 1 158 2.5E-73 T 25-04-2016 IPR016992 Uncharacterised conserved protein UCP032209 APQ13_RS02830 ad244da920103c4fc3309468028dd053 502 Pfam PF02687 FtsX-like permease family 330 495 2.6E-21 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS02830 ad244da920103c4fc3309468028dd053 502 PANTHER PTHR30572:SF11 460 502 3.4E-28 T 25-04-2016 APQ13_RS02830 ad244da920103c4fc3309468028dd053 502 PANTHER PTHR30572:SF11 149 412 3.4E-28 T 25-04-2016 APQ13_RS02830 ad244da920103c4fc3309468028dd053 502 PANTHER PTHR30572 460 502 3.4E-28 T 25-04-2016 APQ13_RS02830 ad244da920103c4fc3309468028dd053 502 PANTHER PTHR30572 149 412 3.4E-28 T 25-04-2016 APQ13_RS05860 c6eb6969c2e7c9d4a62b17a2a7183687 260 SUPERFAMILY SSF56112 6 230 2.68E-32 T 25-04-2016 IPR011009 Protein kinase-like domain APQ13_RS05860 c6eb6969c2e7c9d4a62b17a2a7183687 260 Pfam PF01636 Phosphotransferase enzyme family 40 224 1.9E-18 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase APQ13_RS05860 c6eb6969c2e7c9d4a62b17a2a7183687 260 PANTHER PTHR40086 5 260 1.1E-56 T 25-04-2016 APQ13_RS05860 c6eb6969c2e7c9d4a62b17a2a7183687 260 Gene3D G3DSA:3.90.1200.10 69 210 5.0E-14 T 25-04-2016 APQ13_RS03100 c8abeb98045b84543ec8b65066cc6422 247 Pfam PF12730 ABC-2 family transporter protein 5 186 8.6E-9 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 Gene3D G3DSA:3.50.50.60 18 91 3.7E-12 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 Gene3D G3DSA:3.50.50.60 229 292 3.7E-12 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 Gene3D G3DSA:3.50.50.60 173 174 3.7E-12 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 Pfam PF06100 MCRA family 23 521 1.2E-227 T 25-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 PANTHER PTHR37417 1 588 0.0 T 25-04-2016 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 SUPERFAMILY SSF51905 26 264 3.29E-23 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05375 f8b82b4b5388d1bba89a45f2b6d0dfd1 591 PANTHER PTHR37417:SF1 1 588 0.0 T 25-04-2016 APQ13_RS06060 4c46b946c8130b9d2157d7ff1e0c3de6 76 Pfam PF07288 Protein of unknown function (DUF1447) 2 75 3.6E-30 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 APQ13_RS06060 4c46b946c8130b9d2157d7ff1e0c3de6 76 Hamap MF_01553 UPF0356 protein . 1 76 21.832 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 APQ13_RS06060 4c46b946c8130b9d2157d7ff1e0c3de6 76 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 75 6.0E-36 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 APQ13_RS06060 4c46b946c8130b9d2157d7ff1e0c3de6 76 PANTHER PTHR41306 2 76 6.0E-21 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 APQ13_RS03150 97e361c4cd9cd5a12d731b06991e3606 130 Gene3D G3DSA:2.40.50.100 62 130 1.5E-27 T 25-04-2016 APQ13_RS03150 97e361c4cd9cd5a12d731b06991e3606 130 PANTHER PTHR18866 5 129 4.5E-21 T 25-04-2016 APQ13_RS03150 97e361c4cd9cd5a12d731b06991e3606 130 SUPERFAMILY SSF51230 53 129 1.57E-24 T 25-04-2016 IPR011053 Single hybrid motif APQ13_RS03150 97e361c4cd9cd5a12d731b06991e3606 130 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 86 103 - T 25-04-2016 IPR001882 Biotin-binding site APQ13_RS03150 97e361c4cd9cd5a12d731b06991e3606 130 Pfam PF00364 Biotin-requiring enzyme 63 129 6.3E-23 T 25-04-2016 IPR000089 Biotin/lipoyl attachment APQ13_RS01710 07a4253e1ccf0ee369f9068130aed118 327 Gene3D G3DSA:3.20.20.70 9 301 9.3E-61 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS01710 07a4253e1ccf0ee369f9068130aed118 327 SUPERFAMILY SSF51412 7 267 3.66E-58 T 25-04-2016 APQ13_RS01710 07a4253e1ccf0ee369f9068130aed118 327 PANTHER PTHR32332 4 325 1.9E-104 T 25-04-2016 APQ13_RS01710 07a4253e1ccf0ee369f9068130aed118 327 PANTHER PTHR32332:SF20 4 325 1.9E-104 T 25-04-2016 APQ13_RS01710 07a4253e1ccf0ee369f9068130aed118 327 Pfam PF03060 Nitronate monooxygenase 81 306 1.8E-46 T 25-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APQ13_RS01710 07a4253e1ccf0ee369f9068130aed118 327 Pfam PF03060 Nitronate monooxygenase 5 77 2.1E-19 T 25-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APQ13_RS05740 5a94aebe1036221d092b61dd4d243b02 136 Pfam PF01878 EVE domain 3 131 8.3E-18 T 25-04-2016 IPR002740 EVE domain APQ13_RS05740 5a94aebe1036221d092b61dd4d243b02 136 Gene3D G3DSA:3.10.590.10 3 134 4.0E-24 T 25-04-2016 IPR002740 EVE domain APQ13_RS05740 5a94aebe1036221d092b61dd4d243b02 136 SUPERFAMILY SSF88697 3 133 2.98E-25 T 25-04-2016 IPR015947 PUA-like domain APQ13_RS05740 5a94aebe1036221d092b61dd4d243b02 136 Hamap MF_00771 UPF0310 protein . 2 133 30.158 T 25-04-2016 IPR022996 Uncharacterised protein family UPF0310 APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 SUPERFAMILY SSF52540 288 651 2.26E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 SUPERFAMILY SSF52980 745 930 6.43E-10 T 25-04-2016 IPR011335 Restriction endonuclease type II-like APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 1 1075 43.727 T 25-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 Gene3D G3DSA:3.40.50.300 283 358 3.9E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 Gene3D G3DSA:3.40.50.300 227 251 3.9E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 Pfam PF12705 PD-(D/E)XK nuclease superfamily 747 1024 3.3E-30 T 25-04-2016 APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 PANTHER PTHR30591 5 1071 1.1E-73 T 25-04-2016 APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 TIGRFAM TIGR02774 rexB_recomb: ATP-dependent nuclease subunit B 2 1069 0.0 T 25-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 APQ13_RS01020 bcf6da94d90c9c4077b374512e0e72be 1080 PANTHER PTHR30591:SF1 5 1071 1.1E-73 T 25-04-2016 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 PANTHER PTHR10890 1 444 1.8E-215 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 Pfam PF09190 DALR domain 344 396 1.6E-16 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 314 4.9E-132 T 25-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 SUPERFAMILY SSF47323 331 446 1.83E-30 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 Gene3D G3DSA:1.20.120.640 309 390 9.3E-16 T 25-04-2016 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 Gene3D G3DSA:3.40.50.620 19 307 2.6E-104 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 SUPERFAMILY SSF52374 2 314 2.68E-97 T 25-04-2016 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 446 2.9E-169 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 SMART SM00840 344 402 2.6E-14 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APQ13_RS06980 08b464abf1a0607fa2e569a2abc4184c 447 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 447 37.283 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Gene3D G3DSA:2.40.30.10 3 96 2.2E-32 T 25-04-2016 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 PANTHER PTHR19370 2 245 3.6E-62 T 25-04-2016 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 110 129 4.4E-6 T 25-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 4.4E-6 T 25-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 4.4E-6 T 25-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Pfam PF00175 Oxidoreductase NAD-binding domain 112 201 3.8E-6 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 PANTHER PTHR19370:SF68 2 245 3.6E-62 T 25-04-2016 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Pfam PF00970 Oxidoreductase FAD-binding domain 9 96 4.4E-5 T 25-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 215 255 7.3E-19 T 25-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 PIRSF PIRSF006816 1 258 1.3E-69 T 25-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Gene3D G3DSA:2.10.240.10 215 256 8.7E-19 T 25-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 SUPERFAMILY SSF52343 93 256 3.01E-31 T 25-04-2016 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Gene3D G3DSA:3.40.50.80 103 207 9.2E-34 T 25-04-2016 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 257 35.704 T 25-04-2016 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UniPathway: UPA00070 APQ13_RS02245 d1df5b6e26ab9133b8bba78ea953fc97 258 SUPERFAMILY SSF63380 2 98 1.09E-23 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 SUPERFAMILY SSF56059 103 322 2.47E-66 T 25-04-2016 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 SMART SM01210 327 419 5.8E-28 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 25-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 294 4.8E-80 T 25-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 41.424 T 25-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Gene3D G3DSA:3.90.600.10 328 418 1.2E-20 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 6.5E-30 T 25-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 SMART SM01209 102 294 8.4E-132 T 25-04-2016 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 PANTHER PTHR10520 1 419 4.5E-223 T 25-04-2016 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Gene3D G3DSA:3.30.470.20 190 321 5.6E-57 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 419 1.9E-144 T 25-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Gene3D G3DSA:3.30.1490.20 120 189 1.1E-31 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 416 7.7E-20 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 SUPERFAMILY SSF51246 326 419 4.32E-20 T 25-04-2016 IPR011054 Rudiment single hybrid motif APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 SUPERFAMILY SSF52440 1 101 3.6E-29 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS07375 11e63ac13f8d8a1f3b45e495752f614d 419 Gene3D G3DSA:3.40.50.20 2 94 2.3E-32 T 25-04-2016 IPR016185 Pre-ATP-grasp domain APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 29.319 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 Gene3D G3DSA:3.40.1280.10 1 159 1.9E-59 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 PIRSF PIRSF004505 1 159 5.7E-51 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 PANTHER PTHR33603:SF1 1 159 1.6E-63 T 25-04-2016 APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 4.4E-56 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 SUPERFAMILY SSF75217 1 157 7.85E-57 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 PANTHER PTHR33603 1 159 1.6E-63 T 25-04-2016 APQ13_RS07675 fbadf0ede1e906af005a6d66e692c36e 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 3.1E-51 T 25-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS00200 31089d6e67495d8c78b4e3287f83aff4 216 Pfam PF08820 Domain of unknown function (DUF1803) 3 93 8.3E-34 T 25-04-2016 IPR014924 Protein of unknown function DUF1803 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 Gene3D G3DSA:1.10.10.10 1 86 1.9E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 PANTHER PTHR30126:SF11 1 290 3.3E-42 T 25-04-2016 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.7E-14 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 Gene3D G3DSA:3.40.190.10 176 261 1.0E-15 T 25-04-2016 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 PANTHER PTHR30126 1 290 3.3E-42 T 25-04-2016 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 SUPERFAMILY SSF53850 94 295 4.21E-22 T 25-04-2016 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 Gene3D G3DSA:3.40.190.10 93 175 4.1E-6 T 25-04-2016 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 Pfam PF03466 LysR substrate binding domain 93 291 4.9E-24 T 25-04-2016 IPR005119 LysR, substrate-binding APQ13_RS07055 c8a6e7dfb097bf2707d997e55da9d0df 297 SUPERFAMILY SSF46785 1 85 1.01E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00620 bbe0e752562be22d281abfebee6ae9ad 193 Pfam PF01864 Putative integral membrane protein DUF46 27 191 7.9E-15 T 25-04-2016 IPR032690 CDP-archaeol synthase KEGG: 00564+2.7.7.67|MetaCyc: PWY-6349|UniPathway: UPA00940 APQ13_RS04635 f50ec02265338259ca370b7b3183d2bd 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 102 4.1E-19 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APQ13_RS04635 f50ec02265338259ca370b7b3183d2bd 112 PANTHER PTHR33570:SF1 2 112 2.8E-23 T 25-04-2016 APQ13_RS04635 f50ec02265338259ca370b7b3183d2bd 112 SUPERFAMILY SSF69118 10 107 5.76E-26 T 25-04-2016 IPR029032 AhpD-like APQ13_RS04635 f50ec02265338259ca370b7b3183d2bd 112 Gene3D G3DSA:1.20.1290.10 9 108 2.5E-20 T 25-04-2016 IPR029032 AhpD-like APQ13_RS04635 f50ec02265338259ca370b7b3183d2bd 112 PANTHER PTHR33570 2 112 2.8E-23 T 25-04-2016 APQ13_RS05125 8b7f351ab172eefa03a764cc53f2f7b4 48 Pfam PF12669 Virus attachment protein p12 family 3 36 1.8E-7 T 25-04-2016 APQ13_RS02490 96bf11af9b6a4d3775df69e8d1f94fd0 256 SUPERFAMILY SSF56784 3 221 1.76E-32 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02490 96bf11af9b6a4d3775df69e8d1f94fd0 256 Gene3D G3DSA:3.40.50.1000 3 70 4.2E-19 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02490 96bf11af9b6a4d3775df69e8d1f94fd0 256 Gene3D G3DSA:3.40.50.1000 160 251 4.2E-19 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02490 96bf11af9b6a4d3775df69e8d1f94fd0 256 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 222 1.1E-29 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02490 96bf11af9b6a4d3775df69e8d1f94fd0 256 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 218 3.8E-14 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS04145 5a633367a9c49a7163ddb2a9dd64bc7e 118 SUPERFAMILY SSF47413 1 51 5.09E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS04145 5a633367a9c49a7163ddb2a9dd64bc7e 118 Gene3D G3DSA:1.10.260.40 1 48 2.8E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS04145 5a633367a9c49a7163ddb2a9dd64bc7e 118 Pfam PF01381 Helix-turn-helix 1 46 3.1E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 PIRSF PIRSF034300 1 126 4.1E-54 T 25-04-2016 IPR014590 Uncharacterised conserved protein MORN repeat-containing APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 Gene3D G3DSA:2.20.110.10 34 124 7.5E-22 T 25-04-2016 APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 PANTHER PTHR23084 36 123 2.1E-20 T 25-04-2016 APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 SMART SM00698 67 88 0.023 T 25-04-2016 IPR003409 MORN motif APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 SMART SM00698 44 65 20.0 T 25-04-2016 IPR003409 MORN motif APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 SMART SM00698 90 111 0.5 T 25-04-2016 IPR003409 MORN motif APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 SUPERFAMILY SSF82185 39 122 9.02E-21 T 25-04-2016 APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 Pfam PF02493 MORN repeat 69 89 5.0E-4 T 25-04-2016 IPR003409 MORN motif APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 Pfam PF02493 MORN repeat 46 68 6.5E-5 T 25-04-2016 IPR003409 MORN motif APQ13_RS07300 8cc8a4989096e672b5fd2c6953be9cab 126 Pfam PF02493 MORN repeat 92 110 3.0E-4 T 25-04-2016 IPR003409 MORN motif APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 ProSitePatterns PS00571 Amidases signature. 145 176 - T 25-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 PANTHER PTHR11895 5 389 6.8E-111 T 25-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 PANTHER PTHR11895 417 475 6.8E-111 T 25-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 Gene3D G3DSA:3.90.1300.10 5 475 3.8E-103 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 Pfam PF01425 Amidase 22 467 6.4E-74 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 SUPERFAMILY SSF75304 5 387 1.57E-110 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 SUPERFAMILY SSF75304 420 475 1.57E-110 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 PANTHER PTHR11895:SF35 5 389 6.8E-111 T 25-04-2016 APQ13_RS02275 68bad66719698271fb894e248bfb0304 480 PANTHER PTHR11895:SF35 417 475 6.8E-111 T 25-04-2016 APQ13_RS01810 507cb35725ae29612b0fad91e802032a 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 123 1.7E-52 T 25-04-2016 IPR006056 RidA family APQ13_RS01810 507cb35725ae29612b0fad91e802032a 125 SUPERFAMILY SSF55298 2 124 2.51E-44 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APQ13_RS01810 507cb35725ae29612b0fad91e802032a 125 Pfam PF01042 Endoribonuclease L-PSP 7 123 5.8E-43 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family APQ13_RS01810 507cb35725ae29612b0fad91e802032a 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 25-04-2016 IPR019897 RidA, conserved site APQ13_RS01810 507cb35725ae29612b0fad91e802032a 125 PANTHER PTHR11803 4 124 6.2E-55 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family APQ13_RS01810 507cb35725ae29612b0fad91e802032a 125 Gene3D G3DSA:3.30.1330.40 2 122 1.4E-47 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APQ13_RS00090 57eccaf6071bdd3b9444081bb7475304 84 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 24.033 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APQ13_RS00090 57eccaf6071bdd3b9444081bb7475304 84 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 8.7E-29 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APQ13_RS00090 57eccaf6071bdd3b9444081bb7475304 84 Pfam PF01809 Haemolytic domain 2 67 9.2E-29 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APQ13_RS00090 57eccaf6071bdd3b9444081bb7475304 84 PANTHER PTHR33383 1 76 2.3E-38 T 25-04-2016 APQ13_RS00090 57eccaf6071bdd3b9444081bb7475304 84 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 7.0E-25 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APQ13_RS00090 57eccaf6071bdd3b9444081bb7475304 84 SMART SM01234 1 67 1.4E-44 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APQ13_RS05745 57c9aed44bfea80471b81263d15832a8 152 Gene3D G3DSA:1.10.10.10 9 151 1.7E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05745 57c9aed44bfea80471b81263d15832a8 152 SMART SM00347 34 138 1.8E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS05745 57c9aed44bfea80471b81263d15832a8 152 Pfam PF01047 MarR family 41 102 2.4E-11 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS05745 57c9aed44bfea80471b81263d15832a8 152 SUPERFAMILY SSF46785 13 151 1.32E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05745 57c9aed44bfea80471b81263d15832a8 152 PANTHER PTHR33164 15 150 8.7E-22 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Pfam PF00501 AMP-binding enzyme 24 417 4.9E-80 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Pfam PF00501 AMP-binding enzyme 1060 1448 1.2E-83 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Pfam PF00668 Condensation domain 606 892 1.9E-52 T 25-04-2016 IPR001242 Condensation domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:3.30.300.30 1445 1559 8.1E-33 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 SUPERFAMILY SSF52777 606 794 1.11E-28 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1195 1206 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 25-04-2016 IPR020845 AMP-binding, conserved site APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 45 440 4.2E-105 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1080 1473 2.3E-107 T 25-04-2016 IPR010071 Amino acid adenylation domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:2.30.38.10 1364 1438 6.5E-21 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:2.30.38.10 330 406 1.5E-17 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 SUPERFAMILY SSF52777 785 1021 2.33E-40 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 SUPERFAMILY SSF56801 1016 1568 1.01E-126 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:3.40.50.980 18 172 6.9E-45 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:3.40.50.980 1052 1204 3.1E-42 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:3.40.50.980 173 329 1.5E-29 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:3.40.50.980 1205 1363 2.3E-37 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Pfam PF00550 Phosphopantetheine attachment site 528 585 2.7E-10 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Pfam PF00550 Phosphopantetheine attachment site 1559 1622 2.1E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:1.10.1200.10 1560 1622 2.0E-16 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:1.10.1200.10 517 588 9.0E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 PANTHER PTHR24095 19 1529 0.0 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 SUPERFAMILY SSF47336 520 586 1.83E-10 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 SUPERFAMILY SSF56801 13 535 3.4E-117 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 SUPERFAMILY SSF47336 1551 1622 6.54E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 Gene3D G3DSA:3.30.300.30 411 509 7.4E-24 T 25-04-2016 APQ13_RS01685 044b96638fa7438e9d47b4b988c8cd7a 1628 PANTHER PTHR24095:SF137 19 1529 0.0 T 25-04-2016 APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 235 388 6.5E-15 T 25-04-2016 IPR004477 ComEC/Rec2-related protein APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 SUPERFAMILY SSF56281 485 731 6.36E-48 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 Pfam PF13567 Domain of unknown function (DUF4131) 28 174 1.8E-9 T 25-04-2016 IPR025405 Domain of unknown function DUF4131 APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 110 728 1.4E-86 T 25-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 PANTHER PTHR30619 1 744 6.7E-149 T 25-04-2016 APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 Pfam PF03772 Competence protein 214 459 1.5E-32 T 25-04-2016 IPR004477 ComEC/Rec2-related protein APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 Pfam PF00753 Metallo-beta-lactamase superfamily 492 698 1.7E-13 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 Gene3D G3DSA:3.60.15.10 477 724 5.8E-38 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 PANTHER PTHR30619:SF2 1 744 6.7E-149 T 25-04-2016 APQ13_RS04900 982d5fc9f85fee0570ae750dd69c3018 744 SMART SM00849 493 699 1.7E-14 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS08615 1b42e484ab5fcfa43332d568cb0e6a62 127 Pfam PF06279 Protein of unknown function (DUF1033) 1 116 2.8E-50 T 25-04-2016 IPR010434 Protein of unknown function DUF1033 APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 261 4.1E-50 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 SUPERFAMILY SSF53850 7 262 4.21E-59 T 25-04-2016 APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 SMART SM00062 44 265 4.4E-51 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 Gene3D G3DSA:3.40.190.10 123 225 9.0E-24 T 25-04-2016 APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 PANTHER PTHR18966 1 260 6.8E-29 T 25-04-2016 APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 Gene3D G3DSA:3.40.190.10 226 262 3.3E-35 T 25-04-2016 APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 Gene3D G3DSA:3.40.190.10 42 122 3.3E-35 T 25-04-2016 APQ13_RS00960 18f43a72692aebf21d800dbbf4ea4e92 270 PANTHER PTHR18966:SF191 1 260 6.8E-29 T 25-04-2016 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 Hamap MF_01555 Galactose-6-phosphate isomerase subunit LacA [lacA]. 1 142 40.87 T 25-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 Gene3D G3DSA:3.40.1400.10 1 141 1.4E-43 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 140 2.1E-36 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 PANTHER PTHR30345:SF5 1 142 2.6E-90 T 25-04-2016 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 Pfam PF02502 Ribose/Galactose Isomerase 3 138 8.2E-41 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 PANTHER PTHR30345 1 142 2.6E-90 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 SUPERFAMILY SSF89623 1 141 9.94E-46 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 PIRSF PIRSF005384 1 142 1.9E-43 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS01035 c636f87daaa815d3839f16e4d6ab8a30 142 TIGRFAM TIGR01118 lacA: galactose-6-phosphate isomerase, LacA subunit 1 141 6.0E-87 T 25-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 PIRSF PIRSF002161 1 180 2.6E-64 T 25-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 5.0E-39 T 25-04-2016 IPR031309 Ribosomal protein L5, C-terminal APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 SUPERFAMILY SSF55282 4 179 8.24E-75 T 25-04-2016 IPR022803 Ribosomal protein L5 domain APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 Gene3D G3DSA:3.30.1440.10 3 179 1.5E-75 T 25-04-2016 IPR022803 Ribosomal protein L5 domain APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 PANTHER PTHR11994 1 179 2.0E-93 T 25-04-2016 APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 Pfam PF00281 Ribosomal protein L5 25 81 8.0E-26 T 25-04-2016 IPR031310 Ribosomal protein L5, N-terminal APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.378 T 25-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08460 e1aa88215e40d5f01abe2384a671895f 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 25-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06285 fb475dc426f6eda5c57c34bdaeccb50c 147 Gene3D G3DSA:2.70.40.10 9 146 6.8E-37 T 25-04-2016 IPR029054 dUTPase-like APQ13_RS06285 fb475dc426f6eda5c57c34bdaeccb50c 147 Pfam PF00692 dUTPase 18 146 1.9E-15 T 25-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APQ13_RS06285 fb475dc426f6eda5c57c34bdaeccb50c 147 SUPERFAMILY SSF51283 13 146 4.84E-34 T 25-04-2016 IPR029054 dUTPase-like APQ13_RS07980 e305e2ad4ec507537d23cb13b2f5747f 74 SUPERFAMILY SSF56037 17 67 2.07E-6 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APQ13_RS07980 e305e2ad4ec507537d23cb13b2f5747f 74 Gene3D G3DSA:3.50.40.10 19 66 4.9E-4 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APQ13_RS00615 76819e05999b37d70f4ddb2f8ff8e8f7 256 Pfam PF00194 Eukaryotic-type carbonic anhydrase 35 255 3.9E-48 T 25-04-2016 IPR001148 Alpha carbonic anhydrase APQ13_RS00615 76819e05999b37d70f4ddb2f8ff8e8f7 256 Gene3D G3DSA:3.10.200.10 34 254 2.4E-73 T 25-04-2016 IPR001148 Alpha carbonic anhydrase APQ13_RS00615 76819e05999b37d70f4ddb2f8ff8e8f7 256 SUPERFAMILY SSF51069 35 254 6.54E-74 T 25-04-2016 IPR001148 Alpha carbonic anhydrase APQ13_RS00615 76819e05999b37d70f4ddb2f8ff8e8f7 256 PANTHER PTHR18952 5 255 1.0E-72 T 25-04-2016 IPR023561 Carbonic anhydrase, alpha-class APQ13_RS00615 76819e05999b37d70f4ddb2f8ff8e8f7 256 SMART SM01057 36 255 3.2E-88 T 25-04-2016 IPR001148 Alpha carbonic anhydrase APQ13_RS00615 76819e05999b37d70f4ddb2f8ff8e8f7 256 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 126 142 - T 25-04-2016 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APQ13_RS00675 eb655c65c6d75891c125352e1dc988e9 165 Gene3D G3DSA:3.30.450.40 3 150 1.0E-39 T 25-04-2016 IPR029016 GAF domain-like APQ13_RS00675 eb655c65c6d75891c125352e1dc988e9 165 PANTHER PTHR21021 6 147 3.5E-43 T 25-04-2016 APQ13_RS00675 eb655c65c6d75891c125352e1dc988e9 165 Pfam PF13185 GAF domain 48 148 2.7E-8 T 25-04-2016 IPR003018 GAF domain GO:0005515 APQ13_RS00675 eb655c65c6d75891c125352e1dc988e9 165 SUPERFAMILY SSF55781 3 150 1.18E-36 T 25-04-2016 IPR029016 GAF domain-like APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 Pfam PF16657 Maltogenic Amylase, C-terminal domain 465 508 1.6E-6 T 25-04-2016 IPR032091 Maltogenic Amylase, C-terminal APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 SUPERFAMILY SSF51011 465 535 1.03E-11 T 25-04-2016 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 Gene3D G3DSA:3.20.20.80 2 104 3.6E-114 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 Gene3D G3DSA:3.20.20.80 170 462 3.6E-114 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 PANTHER PTHR10357:SF142 440 504 2.6E-225 T 25-04-2016 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 PANTHER PTHR10357:SF142 1 379 2.6E-225 T 25-04-2016 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 PANTHER PTHR10357:SF142 395 407 2.6E-225 T 25-04-2016 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 Gene3D G3DSA:3.90.400.10 105 169 1.1E-27 T 25-04-2016 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 PANTHER PTHR10357 440 504 2.6E-225 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 PANTHER PTHR10357 1 379 2.6E-225 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 PANTHER PTHR10357 395 407 2.6E-225 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 Pfam PF00128 Alpha amylase, catalytic domain 28 359 4.1E-123 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 Gene3D G3DSA:2.60.40.1180 468 535 1.1E-13 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 SUPERFAMILY SSF51445 3 461 2.47E-142 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS03720 e79fba4a0900d29d8e8e91b4b2f749dd 536 SMART SM00642 13 402 6.2E-149 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 Gene3D G3DSA:2.160.10.10 85 221 3.5E-48 T 25-04-2016 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 231 41.823 T 25-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 161 196 2.0E-11 T 25-04-2016 IPR001451 Hexapeptide repeat APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 Gene3D G3DSA:3.30.70.250 4 83 4.9E-33 T 25-04-2016 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 PANTHER PTHR23416 53 232 2.8E-51 T 25-04-2016 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 SUPERFAMILY SSF51161 84 219 5.11E-48 T 25-04-2016 IPR011004 Trimeric LpxA-like APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 3.9E-9 T 25-04-2016 IPR001451 Hexapeptide repeat APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 82 5.4E-22 T 25-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 8 232 5.8E-112 T 25-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 APQ13_RS06315 081383d2999dbe8fae1ebe59cfab8a5b 232 PANTHER PTHR23416:SF50 53 232 2.8E-51 T 25-04-2016 APQ13_RS06460 323d7f8a9c97c8e38ad6ee5d3cccaf87 452 PANTHER PTHR33843:SF4 1 452 4.1E-204 T 25-04-2016 APQ13_RS06460 323d7f8a9c97c8e38ad6ee5d3cccaf87 452 Pfam PF03611 PTS system sugar-specific permease component 11 407 1.7E-135 T 25-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APQ13_RS06460 323d7f8a9c97c8e38ad6ee5d3cccaf87 452 PANTHER PTHR33843 1 452 4.1E-204 T 25-04-2016 APQ13_RS03820 1477215e15dd56594a6a32c3adb510c9 414 Pfam PF12704 MacB-like periplasmic core domain 18 250 1.1E-31 T 25-04-2016 IPR025857 MacB-like periplasmic core domain APQ13_RS03820 1477215e15dd56594a6a32c3adb510c9 414 Pfam PF02687 FtsX-like permease family 292 407 2.3E-21 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS03820 1477215e15dd56594a6a32c3adb510c9 414 PANTHER PTHR30572 1 414 1.4E-79 T 25-04-2016 APQ13_RS05280 f38c75b336bfc03163d089c2d28dbcaf 193 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 193 34.823 T 25-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APQ13_RS05280 f38c75b336bfc03163d089c2d28dbcaf 193 PANTHER PTHR22854 2 192 8.4E-61 T 25-04-2016 APQ13_RS05280 f38c75b336bfc03163d089c2d28dbcaf 193 PANTHER PTHR22854:SF6 2 192 8.4E-61 T 25-04-2016 APQ13_RS05280 f38c75b336bfc03163d089c2d28dbcaf 193 SUPERFAMILY SSF51366 2 191 9.26E-53 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APQ13_RS05280 f38c75b336bfc03163d089c2d28dbcaf 193 Gene3D G3DSA:3.20.20.70 2 192 2.6E-65 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS05280 f38c75b336bfc03163d089c2d28dbcaf 193 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 189 7.9E-50 T 25-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 Gene3D G3DSA:1.10.8.260 272 316 9.8E-7 T 25-04-2016 IPR023166 HI0933 insert-like domain APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 Pfam PF03486 HI0933-like protein 5 387 7.2E-140 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 SUPERFAMILY SSF160996 200 332 9.81E-33 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 PANTHER PTHR10617:SF103 1 287 8.4E-116 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 PANTHER PTHR10617:SF103 325 386 8.4E-116 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 SUPERFAMILY SSF51905 1 191 4.16E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 SUPERFAMILY SSF51905 332 386 4.16E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-6 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 2.0E-6 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 PANTHER PTHR10617 1 287 8.4E-116 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 PANTHER PTHR10617 325 386 8.4E-116 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 Gene3D G3DSA:2.40.30.10 192 271 2.8E-24 T 25-04-2016 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 386 1.2E-129 T 25-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 Gene3D G3DSA:3.50.50.60 1 189 1.1E-46 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS05965 10ad06d3bde7005119c708dbf5a3b7cf 390 Gene3D G3DSA:3.50.50.60 334 387 1.1E-46 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS00225 740a19a4102949adaac0b883c75f5632 169 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 23 152 2.6E-23 T 25-04-2016 IPR005247 YbhB/YbcL APQ13_RS00225 740a19a4102949adaac0b883c75f5632 169 Pfam PF01161 Phosphatidylethanolamine-binding protein 21 154 2.1E-21 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APQ13_RS00225 740a19a4102949adaac0b883c75f5632 169 PANTHER PTHR30289 19 158 7.6E-14 T 25-04-2016 APQ13_RS00225 740a19a4102949adaac0b883c75f5632 169 SUPERFAMILY SSF49777 5 154 3.4E-32 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APQ13_RS00225 740a19a4102949adaac0b883c75f5632 169 Gene3D G3DSA:3.90.280.10 6 157 2.8E-33 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APQ13_RS07995 3d19bad1fa860f2957dd6fa6287d1e4e 115 Gene3D G3DSA:1.20.1500.10 4 114 6.1E-30 T 25-04-2016 IPR023378 YheA/YmcA-like domain APQ13_RS07995 3d19bad1fa860f2957dd6fa6287d1e4e 115 SUPERFAMILY SSF158622 2 113 2.49E-26 T 25-04-2016 IPR023378 YheA/YmcA-like domain APQ13_RS07995 3d19bad1fa860f2957dd6fa6287d1e4e 115 PIRSF PIRSF021287 2 115 8.7E-41 T 25-04-2016 IPR016783 Biofilm formation YmcA APQ13_RS07995 3d19bad1fa860f2957dd6fa6287d1e4e 115 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 109 1.1E-16 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 PANTHER PTHR33602 1 222 3.2E-33 T 25-04-2016 APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 Gene3D G3DSA:1.10.10.10 104 149 2.0E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 PANTHER PTHR33602:SF1 1 222 3.2E-33 T 25-04-2016 APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 Gene3D G3DSA:1.10.10.10 59 103 6.6E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 Pfam PF02631 RecX family 205 255 1.2E-5 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 Pfam PF02631 RecX family 80 198 3.9E-25 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APQ13_RS09475 ba335bf25fdc1ca9b8c090fead3fc7b5 258 Hamap MF_01114 Regulatory protein RecX [recX]. 38 203 16.933 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APQ13_RS08265 9357ff0882f5fc5207d0fd4fdd876ef5 156 Pfam PF11217 Protein of unknown function (DUF3013) 1 155 3.2E-64 T 25-04-2016 IPR021380 Protein of unknown function DUF3013 APQ13_RS04015 98dc07b95262fd1f804fb79ce7d45015 111 PANTHER PTHR13696:SF62 5 108 3.9E-22 T 25-04-2016 APQ13_RS04015 98dc07b95262fd1f804fb79ce7d45015 111 PANTHER PTHR13696 5 108 3.9E-22 T 25-04-2016 APQ13_RS04015 98dc07b95262fd1f804fb79ce7d45015 111 SUPERFAMILY SSF117916 14 109 5.89E-32 T 25-04-2016 APQ13_RS04015 98dc07b95262fd1f804fb79ce7d45015 111 Pfam PF01883 Domain of unknown function DUF59 15 87 1.6E-22 T 25-04-2016 IPR002744 Domain of unknown function DUF59 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 Pfam PF00471 Ribosomal protein L33 3 49 2.2E-18 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 PANTHER PTHR15238:SF3 1 49 7.0E-17 T 25-04-2016 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 SUPERFAMILY SSF57829 1 49 2.08E-15 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.0E-17 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 25-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 PANTHER PTHR15238 1 49 7.0E-17 T 25-04-2016 APQ13_RS07935 730ff54406fcf7615d7f35d1ea9e2a42 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.717 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS06890 0235b937650a91324c5652850c4ebaf0 200 Pfam PF03358 NADPH-dependent FMN reductase 1 146 2.3E-35 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APQ13_RS06890 0235b937650a91324c5652850c4ebaf0 200 SUPERFAMILY SSF52218 1 172 3.14E-39 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS06890 0235b937650a91324c5652850c4ebaf0 200 PANTHER PTHR30543 1 194 3.6E-52 T 25-04-2016 APQ13_RS06890 0235b937650a91324c5652850c4ebaf0 200 PANTHER PTHR30543:SF6 1 194 3.6E-52 T 25-04-2016 APQ13_RS06890 0235b937650a91324c5652850c4ebaf0 200 Gene3D G3DSA:3.40.50.360 1 182 8.3E-45 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS09135 53b47b309497ea7d21a9028bdf83e508 228 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 129 206 4.4E-7 T 25-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 286 39.358 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 Pfam PF01039 Carboxyl transferase domain 69 245 2.4E-17 T 25-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 205 222 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 168 186 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 148 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 234 245 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 256 265 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PANTHER PTHR22855 13 284 4.8E-137 T 25-04-2016 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 SUPERFAMILY SSF52096 34 284 9.24E-74 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 Gene3D G3DSA:3.90.226.10 28 284 3.4E-71 T 25-04-2016 IPR029045 ClpP/crotonase-like domain APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 PANTHER PTHR22855:SF17 13 284 4.8E-137 T 25-04-2016 APQ13_RS09675 a2e857f2fbb030b1a41839bca7ffa9cf 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 18 284 2.7E-109 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APQ13_RS06190 7a0afe52857e3c93d54a24fa0251715a 85 SUPERFAMILY SSF160379 1 82 1.57E-14 T 25-04-2016 APQ13_RS06190 7a0afe52857e3c93d54a24fa0251715a 85 Pfam PF08002 Protein of unknown function (DUF1697) 1 47 6.4E-10 T 25-04-2016 IPR012545 Protein of unknown function DUF1697 APQ13_RS06190 7a0afe52857e3c93d54a24fa0251715a 85 Gene3D G3DSA:3.30.70.1280 1 49 3.0E-11 T 25-04-2016 APQ13_RS06905 7463f20e01c4460c5d25f182a36631f3 263 SUPERFAMILY SSF81301 11 132 2.98E-15 T 25-04-2016 APQ13_RS06905 7463f20e01c4460c5d25f182a36631f3 263 Pfam PF13228 Domain of unknown function (DUF4037) 113 208 2.7E-8 T 25-04-2016 IPR025117 Domain of unknown function DUF4037 APQ13_RS06905 7463f20e01c4460c5d25f182a36631f3 263 Gene3D G3DSA:3.30.460.10 11 100 1.4E-9 T 25-04-2016 APQ13_RS06905 7463f20e01c4460c5d25f182a36631f3 263 Pfam PF01909 Nucleotidyltransferase domain 6 107 9.3E-6 T 25-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APQ13_RS08090 bff515c3749bea7f553ac32d3edb8b4a 185 Gene3D G3DSA:3.40.630.30 2 164 1.1E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS08090 bff515c3749bea7f553ac32d3edb8b4a 185 PANTHER PTHR39173 1 170 2.5E-48 T 25-04-2016 APQ13_RS08090 bff515c3749bea7f553ac32d3edb8b4a 185 SUPERFAMILY SSF55729 2 162 3.36E-22 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS08090 bff515c3749bea7f553ac32d3edb8b4a 185 Pfam PF13302 Acetyltransferase (GNAT) domain 2 152 1.2E-12 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 122 456 4.0E-109 T 25-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 PANTHER PTHR30505 5 415 1.3E-198 T 25-04-2016 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 PANTHER PTHR30505:SF9 5 415 1.3E-198 T 25-04-2016 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 Gene3D G3DSA:3.40.50.2300 3 105 2.7E-41 T 25-04-2016 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 90 3.0E-33 T 25-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 Pfam PF02378 Phosphotransferase system, EIIC 136 402 7.8E-15 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 SUPERFAMILY SSF52794 5 103 3.31E-36 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS07150 5425deeb52678a270d0b25d98ad4e32d 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 9 96 6.5E-17 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS07400 122eb54068ee741a914c70f6b6e9c3c1 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 53 1.9E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS07400 122eb54068ee741a914c70f6b6e9c3c1 180 SUPERFAMILY SSF46689 4 64 1.54E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS07400 122eb54068ee741a914c70f6b6e9c3c1 180 Gene3D G3DSA:1.10.357.10 5 174 2.0E-12 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 PANTHER PTHR34134 1 128 1.2E-25 T 25-04-2016 APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 Gene3D G3DSA:1.10.10.10 1 78 2.1E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 3 132 2.0E-56 T 25-04-2016 IPR014071 Copper transport repressor CopY/TcrY APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 PIRSF PIRSF019455 1 129 3.8E-40 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 Pfam PF03965 Penicillinase repressor 4 116 7.9E-37 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 SUPERFAMILY SSF46785 2 116 2.53E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS05810 cdb8d1c2fe3dcb65839405d8dbebf3c7 147 PANTHER PTHR34134:SF1 1 128 1.2E-25 T 25-04-2016 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 PANTHER PTHR10060:SF20 1 258 3.6E-117 T 25-04-2016 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 PANTHER PTHR10060 1 258 3.6E-117 T 25-04-2016 IPR001130 TatD family GO:0016788 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 Pfam PF01026 TatD related DNase 5 254 3.7E-78 T 25-04-2016 IPR001130 TatD family GO:0016788 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 Gene3D G3DSA:3.20.20.140 2 257 2.0E-92 T 25-04-2016 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 SUPERFAMILY SSF51556 2 256 2.68E-91 T 25-04-2016 IPR032466 Metal-dependent hydrolase APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 PIRSF PIRSF005902 1 258 2.1E-80 T 25-04-2016 IPR001130 TatD family GO:0016788 APQ13_RS06205 98aa1381883b2ab52184b3c11ba245a0 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 4 255 2.6E-81 T 25-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 Pfam PF00746 Gram positive anchor 415 450 6.3E-7 T 25-04-2016 IPR019948 Gram-positive anchor APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 421 453 2.4E-6 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 SUPERFAMILY SSF49401 26 162 1.01E-21 T 25-04-2016 IPR008966 Adhesion domain APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 Gene3D G3DSA:2.60.40.1280 34 192 1.2E-28 T 25-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 Gene3D G3DSA:2.60.40.740 193 322 4.1E-18 T 25-04-2016 IPR008456 Collagen binding domain GO:0005518 APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 Pfam PF05737 Collagen binding domain 180 316 8.4E-37 T 25-04-2016 IPR008456 Collagen binding domain GO:0005518 APQ13_RS03295 a5bc4717b4e90ddd6a22e96d4999a356 453 SUPERFAMILY SSF49401 179 327 9.94E-23 T 25-04-2016 IPR008966 Adhesion domain APQ13_RS01555 cd33a85caca04d69b234702ca9e01bc1 178 SUPERFAMILY SSF51695 35 171 1.75E-20 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APQ13_RS01555 cd33a85caca04d69b234702ca9e01bc1 178 PANTHER PTHR23344 1 169 2.4E-36 T 25-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APQ13_RS01555 cd33a85caca04d69b234702ca9e01bc1 178 PANTHER PTHR23344:SF23 1 169 2.4E-36 T 25-04-2016 APQ13_RS01555 cd33a85caca04d69b234702ca9e01bc1 178 Gene3D G3DSA:3.20.20.190 28 171 1.3E-20 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APQ13_RS01555 cd33a85caca04d69b234702ca9e01bc1 178 Pfam PF13653 Glycerophosphoryl diester phosphodiesterase family 141 169 2.6E-8 T 25-04-2016 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 25-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 SMART SM01130 7 292 5.4E-107 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 Pfam PF00701 Dihydrodipicolinate synthetase family 10 291 3.0E-77 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PANTHER PTHR12128 11 292 1.7E-114 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 57.455 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 7.0E-28 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 7.0E-28 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 7.0E-28 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 7.0E-28 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 291 1.5E-87 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 SUPERFAMILY SSF51569 11 292 3.04E-87 T 25-04-2016 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PIRSF PIRSF001365 7 293 1.7E-82 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 Gene3D G3DSA:3.20.20.70 11 293 3.9E-101 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS03275 95e7c4ae9f025d3cf43821d68e11aed9 293 PANTHER PTHR12128:SF34 11 292 1.7E-114 T 25-04-2016 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 SUPERFAMILY SSF46604 90 135 2.88E-5 T 25-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 SUPERFAMILY SSF51344 4 87 2.35E-22 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 85 8.5E-26 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 135 8.3E-17 T 25-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 20 87 7.0E-24 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.0E-28 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 135 22.661 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 Gene3D G3DSA:1.20.5.440 93 136 1.3E-13 T 25-04-2016 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 PANTHER PTHR13822 1 135 7.8E-28 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS00925 92c4dfd1cb07519a749576811c3af1eb 138 Gene3D G3DSA:2.60.15.10 3 92 1.9E-24 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 PANTHER PTHR12553 1 156 1.7E-79 T 25-04-2016 APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 PANTHER PTHR12553 187 309 1.7E-79 T 25-04-2016 APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 Hamap MF_01818 Ribonuclease BN [rbn]. 1 309 38.35 T 25-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 Gene3D G3DSA:3.60.15.10 3 309 8.0E-81 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 Pfam PF12706 Beta-lactamase superfamily domain 206 275 9.8E-7 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 Pfam PF00753 Metallo-beta-lactamase superfamily 35 78 3.7E-9 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 308 2.4E-104 T 25-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APQ13_RS01135 6ce367444f35efe6ad9eb9eadf4c61a1 309 SUPERFAMILY SSF56281 1 309 4.59E-78 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS04355 295f025e08edb21983ddff418b6c6a59 301 Pfam PF03773 Predicted permease 13 298 7.8E-68 T 25-04-2016 IPR005524 Predicted permease DUF318 APQ13_RS04355 295f025e08edb21983ddff418b6c6a59 301 PANTHER PTHR34184:SF1 1 300 5.0E-108 T 25-04-2016 APQ13_RS04355 295f025e08edb21983ddff418b6c6a59 301 PANTHER PTHR34184 1 300 5.0E-108 T 25-04-2016 APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 Gene3D G3DSA:3.40.50.1240 1 226 2.1E-89 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 8.9E-27 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 PANTHER PTHR11931 1 229 7.6E-138 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 SUPERFAMILY SSF53254 1 221 1.46E-70 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 42.776 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 229 5.3E-105 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APQ13_RS05015 76948e2e4ae94f85d89f2f754c148253 230 SMART SM00855 3 189 1.3E-22 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS09410 aa2efe661069547f095566724b90a301 419 PANTHER PTHR22939 207 419 9.5E-60 T 25-04-2016 APQ13_RS09410 aa2efe661069547f095566724b90a301 419 Gene3D G3DSA:2.30.42.10 166 273 1.4E-14 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS09410 aa2efe661069547f095566724b90a301 419 SUPERFAMILY SSF50156 172 244 1.12E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 APQ13_RS09410 aa2efe661069547f095566724b90a301 419 Pfam PF02163 Peptidase family M50 6 405 1.5E-79 T 25-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APQ13_RS09410 aa2efe661069547f095566724b90a301 419 PANTHER PTHR22939:SF78 207 419 9.5E-60 T 25-04-2016 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 PANTHER PTHR10174 48 356 8.3E-68 T 25-04-2016 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 SMART SM00859 4 119 5.0E-40 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 Gene3D G3DSA:3.40.50.720 2 140 6.9E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 137 328 4.1E-57 T 25-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 342 37.107 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 25-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 PANTHER PTHR10174:SF2 48 356 8.3E-68 T 25-04-2016 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 117 4.8E-31 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 Gene3D G3DSA:3.30.360.10 141 325 4.5E-74 T 25-04-2016 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 342 3.5E-132 T 25-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 SUPERFAMILY SSF51735 3 155 1.54E-48 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 SUPERFAMILY SSF55347 127 329 2.17E-68 T 25-04-2016 APQ13_RS03280 b3a601e43ea80c328c2da4c1a90ae9fa 358 PIRSF PIRSF000148 2 347 1.2E-123 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APQ13_RS09485 8bd93cda0ac8d84fc899b5dcd6664d7e 153 PIRSF PIRSF005087 3 153 8.6E-38 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APQ13_RS09485 8bd93cda0ac8d84fc899b5dcd6664d7e 153 Pfam PF07972 NrdI Flavodoxin like 7 143 7.1E-38 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APQ13_RS09485 8bd93cda0ac8d84fc899b5dcd6664d7e 153 PANTHER PTHR37297 4 150 1.5E-30 T 25-04-2016 APQ13_RS09485 8bd93cda0ac8d84fc899b5dcd6664d7e 153 Gene3D G3DSA:3.40.50.360 6 148 1.2E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS09485 8bd93cda0ac8d84fc899b5dcd6664d7e 153 SUPERFAMILY SSF52218 3 142 1.57E-19 T 25-04-2016 IPR029039 Flavoprotein-like domain APQ13_RS09485 8bd93cda0ac8d84fc899b5dcd6664d7e 153 PANTHER PTHR37297:SF1 4 150 1.5E-30 T 25-04-2016 APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 PANTHER PTHR24220:SF160 3 223 1.1E-81 T 25-04-2016 APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 Pfam PF00005 ABC transporter 17 160 1.4E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 SUPERFAMILY SSF52540 2 221 7.03E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 PANTHER PTHR24220 3 223 1.1E-81 T 25-04-2016 APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 SMART SM00382 26 211 1.6E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05870 c06e6298c124c9d7d15528ccee714c22 241 Gene3D G3DSA:3.40.50.300 1 226 2.3E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 Gene3D G3DSA:3.40.50.1820 190 426 4.9E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 SUPERFAMILY SSF53474 194 428 2.55E-25 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 Pfam PF00326 Prolyl oligopeptidase family 291 404 6.6E-11 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 PANTHER PTHR10655:SF24 207 349 3.8E-16 T 25-04-2016 APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 PANTHER PTHR10655:SF24 373 430 3.8E-16 T 25-04-2016 APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 PANTHER PTHR10655 207 349 3.8E-16 T 25-04-2016 APQ13_RS03320 127891c3846ad211abe4463463fbb417 503 PANTHER PTHR10655 373 430 3.8E-16 T 25-04-2016 APQ13_RS07295 0b0e87d5ef391f29ce92ed030ef394ed 596 Gene3D G3DSA:3.40.50.1110 404 582 2.1E-6 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS07295 0b0e87d5ef391f29ce92ed030ef394ed 596 PANTHER PTHR23028 14 350 2.5E-53 T 25-04-2016 APQ13_RS07295 0b0e87d5ef391f29ce92ed030ef394ed 596 SUPERFAMILY SSF52266 411 582 2.89E-9 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS07295 0b0e87d5ef391f29ce92ed030ef394ed 596 PANTHER PTHR23028:SF53 14 350 2.5E-53 T 25-04-2016 APQ13_RS07295 0b0e87d5ef391f29ce92ed030ef394ed 596 Pfam PF01757 Acyltransferase family 4 339 3.1E-20 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APQ13_RS07900 aecd749f234344cafbcaaeff28dbdde5 178 Gene3D G3DSA:3.40.50.1240 2 172 1.4E-11 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS07900 aecd749f234344cafbcaaeff28dbdde5 178 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 44 156 1.5E-7 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APQ13_RS07900 aecd749f234344cafbcaaeff28dbdde5 178 SUPERFAMILY SSF53254 1 172 1.09E-14 T 25-04-2016 IPR029033 Histidine phosphatase superfamily APQ13_RS03430 b8bf8e9c0f38efe7bc816e2fc6c13572 283 PANTHER PTHR10534:SF0 1 259 2.5E-28 T 25-04-2016 APQ13_RS03430 b8bf8e9c0f38efe7bc816e2fc6c13572 283 Pfam PF08543 Phosphomethylpyrimidine kinase 76 255 9.4E-18 T 25-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APQ13_RS03430 b8bf8e9c0f38efe7bc816e2fc6c13572 283 Gene3D G3DSA:3.40.1190.20 2 265 4.0E-44 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS03430 b8bf8e9c0f38efe7bc816e2fc6c13572 283 PANTHER PTHR10534 1 259 2.5E-28 T 25-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APQ13_RS03430 b8bf8e9c0f38efe7bc816e2fc6c13572 283 SUPERFAMILY SSF53613 1 271 1.56E-47 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 PANTHER PTHR18804 1 38 6.7E-21 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 3.0E-10 T 25-04-2016 APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.445 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 Pfam PF00444 Ribosomal protein L36 1 38 4.5E-22 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 SUPERFAMILY SSF57840 1 38 7.46E-18 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08515 363da2e02d1259a7a20bd6bc6d646820 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.4E-23 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07050 99e8ccd1ffd3593f41e0b2ee6b3fc90b 117 SMART SM00530 14 69 7.1E-12 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS07050 99e8ccd1ffd3593f41e0b2ee6b3fc90b 117 SUPERFAMILY SSF47413 8 73 9.57E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS07050 99e8ccd1ffd3593f41e0b2ee6b3fc90b 117 PANTHER PTHR10245:SF49 12 85 2.8E-12 T 25-04-2016 APQ13_RS07050 99e8ccd1ffd3593f41e0b2ee6b3fc90b 117 PANTHER PTHR10245 12 85 2.8E-12 T 25-04-2016 APQ13_RS07050 99e8ccd1ffd3593f41e0b2ee6b3fc90b 117 Pfam PF01381 Helix-turn-helix 16 69 5.5E-12 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS07050 99e8ccd1ffd3593f41e0b2ee6b3fc90b 117 Gene3D G3DSA:1.10.260.40 8 73 3.7E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS00610 b58e1b2f395e8c6778d987448fb9f826 452 PANTHER PTHR33989 2 449 1.9E-107 T 25-04-2016 APQ13_RS00610 b58e1b2f395e8c6778d987448fb9f826 452 PIRSF PIRSF006351 4 452 7.1E-133 T 25-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APQ13_RS00610 b58e1b2f395e8c6778d987448fb9f826 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 21 447 1.9E-85 T 25-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APQ13_RS00610 b58e1b2f395e8c6778d987448fb9f826 452 Pfam PF02378 Phosphotransferase system, EIIC 36 373 2.5E-44 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 PANTHER PTHR30471 1 225 3.9E-96 T 25-04-2016 APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 SUPERFAMILY SSF102712 167 195 4.45E-5 T 25-04-2016 APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 225 4.2E-73 T 25-04-2016 IPR001405 RadC protein APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 SUPERFAMILY SSF47781 16 92 2.45E-5 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 Pfam PF04002 RadC-like JAB domain 106 222 1.2E-40 T 25-04-2016 IPR025657 RadC-like JAB domain APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 25-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 Gene3D G3DSA:3.40.140.10 102 223 8.8E-44 T 25-04-2016 APQ13_RS03010 503ac2f610583475b1dbe0da0d8dc432 226 PANTHER PTHR30471:SF3 1 225 3.9E-96 T 25-04-2016 APQ13_RS02095 b609f48071839fc2e1fd30a075ae9ef6 105 Gene3D G3DSA:1.10.260.40 13 91 4.0E-20 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS02095 b609f48071839fc2e1fd30a075ae9ef6 105 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 20 52 1.4E-4 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS02095 b609f48071839fc2e1fd30a075ae9ef6 105 SUPERFAMILY SSF47413 18 91 1.38E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS02095 b609f48071839fc2e1fd30a075ae9ef6 105 SMART SM00530 19 74 2.5E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 SUPERFAMILY SSF54768 8 75 8.58E-25 T 25-04-2016 APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 8.2E-68 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 156 1.5E-27 T 25-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 25-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 35.765 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 Gene3D G3DSA:3.30.160.20 9 71 2.5E-32 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 SUPERFAMILY SSF54211 79 157 5.31E-24 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 Gene3D G3DSA:3.30.230.10 75 157 7.5E-31 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 PANTHER PTHR13718 9 160 1.6E-71 T 25-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APQ13_RS08485 c766759be7a97b7489f63a8cd9438add 164 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 7.2E-32 T 25-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 SUPERFAMILY SSF53850 29 264 8.69E-42 T 25-04-2016 APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 PANTHER PTHR18966 30 261 1.3E-12 T 25-04-2016 APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 PANTHER PTHR18966:SF191 30 261 1.3E-12 T 25-04-2016 APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 Gene3D G3DSA:3.40.190.10 225 265 5.9E-24 T 25-04-2016 APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 Gene3D G3DSA:3.40.190.10 30 109 5.9E-24 T 25-04-2016 APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 SMART SM00062 32 266 1.2E-35 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 263 1.1E-41 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS05675 89ac8f533da0c399b897216adb9b3c65 273 Gene3D G3DSA:3.40.190.10 110 211 5.0E-20 T 25-04-2016 APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 Gene3D G3DSA:3.40.50.10410 85 177 6.3E-36 T 25-04-2016 IPR023215 Nitrophenylphosphatase-like domain APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 228 2.7E-36 T 25-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 PANTHER PTHR19288:SF3 2 253 7.3E-90 T 25-04-2016 APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 106 2.5E-20 T 25-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 3 252 7.1E-114 T 25-04-2016 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 Gene3D G3DSA:3.40.50.1000 178 251 1.8E-39 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 Gene3D G3DSA:3.40.50.1000 2 80 1.8E-39 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 SUPERFAMILY SSF56784 3 252 6.27E-72 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 PANTHER PTHR19288 2 253 7.3E-90 T 25-04-2016 APQ13_RS01400 aad86d0455cd26daf8e2e0c30a236cb1 257 Pfam PF13242 HAD-hyrolase-like 179 251 2.9E-18 T 25-04-2016 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 Gene3D G3DSA:4.10.1160.10 19 61 1.9E-21 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 1.6E-20 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 SUPERFAMILY SSF143800 1 60 7.85E-23 T 25-04-2016 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 PANTHER PTHR39080 2 62 1.4E-21 T 25-04-2016 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 PANTHER PTHR39080:SF1 2 62 1.4E-21 T 25-04-2016 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 Pfam PF00830 Ribosomal L28 family 3 58 1.4E-20 T 25-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APQ13_RS07120 fa53c05d456ec855bf977d691fa6991a 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 17.574 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08190 2859ad4445077e43d2a3b1955b91902f 255 Gene3D G3DSA:3.40.50.300 3 224 1.4E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08190 2859ad4445077e43d2a3b1955b91902f 255 SUPERFAMILY SSF52540 4 226 1.16E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08190 2859ad4445077e43d2a3b1955b91902f 255 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08190 2859ad4445077e43d2a3b1955b91902f 255 SMART SM00382 34 222 2.2E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS08190 2859ad4445077e43d2a3b1955b91902f 255 PANTHER PTHR24220 6 223 1.5E-76 T 25-04-2016 APQ13_RS08190 2859ad4445077e43d2a3b1955b91902f 255 Pfam PF00005 ABC transporter 25 174 7.0E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 Gene3D G3DSA:3.90.1030.10 2 128 2.7E-49 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 PANTHER PTHR14413:SF5 1 67 2.1E-57 T 25-04-2016 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 PANTHER PTHR14413:SF5 84 128 2.1E-57 T 25-04-2016 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 SUPERFAMILY SSF64263 2 128 1.57E-43 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 PANTHER PTHR14413 1 67 2.1E-57 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 PANTHER PTHR14413 84 128 2.1E-57 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 128 27.498 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 Pfam PF01196 Ribosomal protein L17 16 128 8.1E-40 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08535 f97453f5154e4398b0483c6048b850f2 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 128 5.9E-48 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 PIRSF PIRSF000164 1 304 3.7E-75 T 25-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 PANTHER PTHR11938:SF5 1 303 4.8E-70 T 25-04-2016 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 SUPERFAMILY SSF51395 4 304 8.86E-78 T 25-04-2016 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 Gene3D G3DSA:3.20.20.70 3 303 2.4E-88 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 5 306 38.026 T 25-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 Pfam PF01180 Dihydroorotate dehydrogenase 5 291 9.1E-85 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 301 5.4E-104 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APQ13_RS02250 e45341b6b9aedd6af609a272f5c0a30e 309 PANTHER PTHR11938 1 303 4.8E-70 T 25-04-2016 APQ13_RS02435 4aaef586120326ebef6532050fe2785c 145 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 46 62 - T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS02435 4aaef586120326ebef6532050fe2785c 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 143 1.6E-34 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS02435 4aaef586120326ebef6532050fe2785c 145 Gene3D G3DSA:3.40.930.10 3 143 3.7E-39 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS02435 4aaef586120326ebef6532050fe2785c 145 SUPERFAMILY SSF55804 3 143 1.57E-37 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APQ13_RS02435 4aaef586120326ebef6532050fe2785c 145 PANTHER PTHR30505 3 145 1.7E-67 T 25-04-2016 APQ13_RS02435 4aaef586120326ebef6532050fe2785c 145 PANTHER PTHR30505:SF8 3 145 1.7E-67 T 25-04-2016 APQ13_RS07280 9a7e767de8ae84c22d1f4a7710f8c7ae 88 SUPERFAMILY SSF55021 1 81 1.95E-22 T 25-04-2016 APQ13_RS07280 9a7e767de8ae84c22d1f4a7710f8c7ae 88 PANTHER PTHR34875 1 88 8.2E-30 T 25-04-2016 APQ13_RS07280 9a7e767de8ae84c22d1f4a7710f8c7ae 88 Gene3D G3DSA:3.30.70.260 1 87 3.6E-32 T 25-04-2016 APQ13_RS07280 9a7e767de8ae84c22d1f4a7710f8c7ae 88 Hamap MF_01054 UPF0237 protein . 1 88 25.248 T 25-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type APQ13_RS07280 9a7e767de8ae84c22d1f4a7710f8c7ae 88 Pfam PF13740 ACT domain 4 75 2.0E-13 T 25-04-2016 APQ13_RS06180 5350caa0b28f8033886597d3d9b8bd4f 205 Gene3D G3DSA:3.40.109.10 4 202 9.5E-45 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS06180 5350caa0b28f8033886597d3d9b8bd4f 205 SUPERFAMILY SSF55469 2 201 1.22E-46 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS06180 5350caa0b28f8033886597d3d9b8bd4f 205 PANTHER PTHR23026 6 97 5.4E-27 T 25-04-2016 APQ13_RS06180 5350caa0b28f8033886597d3d9b8bd4f 205 PANTHER PTHR23026 121 205 5.4E-27 T 25-04-2016 APQ13_RS06180 5350caa0b28f8033886597d3d9b8bd4f 205 Pfam PF00881 Nitroreductase family 10 184 2.3E-29 T 25-04-2016 IPR029479 Nitroreductase APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 Gene3D G3DSA:3.30.450.20 87 199 7.7E-10 T 25-04-2016 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 Gene3D G3DSA:3.30.565.10 261 436 3.4E-50 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 SMART SM00388 207 273 1.9E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 434 1.6E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 PANTHER PTHR24423 13 449 2.2E-184 T 25-04-2016 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 SMART SM00387 323 435 4.6E-40 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 Pfam PF00989 PAS fold 96 180 3.9E-7 T 25-04-2016 IPR013767 PAS fold GO:0006355 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 272 1.9E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 Gene3D G3DSA:1.10.287.130 200 260 6.5E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 SUPERFAMILY SSF55785 84 199 1.92E-11 T 25-04-2016 IPR000014 PAS domain APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 SUPERFAMILY SSF55874 263 433 1.2E-46 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 SUPERFAMILY SSF47384 193 272 2.16E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 SMART SM00091 94 159 3.1E-6 T 25-04-2016 IPR000014 PAS domain APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 2.8E-20 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 2.8E-20 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 2.8E-20 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 2.8E-20 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APQ13_RS00975 36c58f22f7a049442a0a2c4c88bde622 450 PANTHER PTHR24423:SF568 13 449 2.2E-184 T 25-04-2016 APQ13_RS04765 8e816c1f8a9868d130a5e3c19f427edd 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 145 312 5.5E-18 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04765 8e816c1f8a9868d130a5e3c19f427edd 328 SUPERFAMILY SSF161098 126 306 1.31E-26 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04765 8e816c1f8a9868d130a5e3c19f427edd 328 Gene3D G3DSA:1.10.3720.10 133 315 1.3E-20 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04765 8e816c1f8a9868d130a5e3c19f427edd 328 PANTHER PTHR30151:SF15 98 323 8.0E-60 T 25-04-2016 APQ13_RS04765 8e816c1f8a9868d130a5e3c19f427edd 328 PANTHER PTHR30151 98 323 8.0E-60 T 25-04-2016 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 Gene3D G3DSA:3.40.605.10 4 240 8.9E-58 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 PANTHER PTHR11699:SF205 1 455 6.9E-217 T 25-04-2016 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 SUPERFAMILY SSF53720 4 455 1.44E-126 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 Gene3D G3DSA:3.40.309.10 241 428 1.2E-57 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 Pfam PF00171 Aldehyde dehydrogenase family 3 449 3.9E-121 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APQ13_RS07840 4a34c26c7ef709bea79519202880bdd7 458 PANTHER PTHR11699 1 455 6.9E-217 T 25-04-2016 APQ13_RS08805 194880404c7ffba9e6c741a15a462239 229 Pfam PF16316 Domain of unknown function (DUF4956) 36 191 1.9E-24 T 25-04-2016 IPR032531 Protein of unknown function DUF4956 APQ13_RS00515 df2054d060068d6e0e039422645f4618 135 PANTHER PTHR34299:SF1 4 134 1.1E-33 T 25-04-2016 APQ13_RS00515 df2054d060068d6e0e039422645f4618 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 77 88 - T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APQ13_RS00515 df2054d060068d6e0e039422645f4618 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 125 1.9E-32 T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APQ13_RS00515 df2054d060068d6e0e039422645f4618 135 PANTHER PTHR34299 4 134 1.1E-33 T 25-04-2016 APQ13_RS00515 df2054d060068d6e0e039422645f4618 135 Gene3D G3DSA:1.10.3830.10 10 130 2.0E-41 T 25-04-2016 APQ13_RS05980 b9f05d1817e27e120954de67657e96d4 232 Pfam PF03591 AzlC protein 15 155 9.2E-35 T 25-04-2016 IPR011606 Branched-chain amino acid transport, permease APQ13_RS05980 b9f05d1817e27e120954de67657e96d4 232 PANTHER PTHR34979 6 232 2.7E-52 T 25-04-2016 APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 PANTHER PTHR13939:SF0 1 417 1.5E-172 T 25-04-2016 APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 SMART SM00852 4 172 4.8E-36 T 25-04-2016 IPR001453 MoaB/Mog domain APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 SUPERFAMILY SSF142433 252 412 6.8E-46 T 25-04-2016 IPR008136 CinA, C-terminal APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 411 6.5E-120 T 25-04-2016 IPR008135 Competence-induced protein CinA APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 266 410 1.4E-33 T 25-04-2016 IPR008136 CinA, C-terminal APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 Pfam PF02464 Competence-damaged protein 258 411 2.8E-46 T 25-04-2016 IPR008136 CinA, C-terminal APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 418 158.601 T 25-04-2016 IPR008135 Competence-induced protein CinA APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 Pfam PF00994 Probable molybdopterin binding domain 4 170 1.3E-32 T 25-04-2016 IPR001453 MoaB/Mog domain APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 PIRSF PIRSF006728 1 417 1.4E-151 T 25-04-2016 IPR008135 Competence-induced protein CinA APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 167 4.7E-26 T 25-04-2016 IPR001453 MoaB/Mog domain APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 PANTHER PTHR13939 1 417 1.5E-172 T 25-04-2016 APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 Gene3D G3DSA:3.40.980.10 1 102 1.4E-35 T 25-04-2016 IPR001453 MoaB/Mog domain APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 Gene3D G3DSA:3.40.980.10 144 171 1.4E-35 T 25-04-2016 IPR001453 MoaB/Mog domain APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 SUPERFAMILY SSF53218 2 204 1.44E-38 T 25-04-2016 IPR001453 MoaB/Mog domain APQ13_RS08025 9f04ca2b489c1caf188571c47d478bfb 418 Gene3D G3DSA:3.90.950.20 252 413 1.0E-51 T 25-04-2016 IPR008136 CinA, C-terminal APQ13_RS07115 844235e1249277e7c17986f97e31d2fe 442 Pfam PF01554 MatE 241 402 2.7E-28 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07115 844235e1249277e7c17986f97e31d2fe 442 Pfam PF01554 MatE 19 179 3.1E-35 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07115 844235e1249277e7c17986f97e31d2fe 442 PIRSF PIRSF006603 1 442 1.2E-111 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS07115 844235e1249277e7c17986f97e31d2fe 442 PANTHER PTHR11206 3 434 3.9E-136 T 25-04-2016 APQ13_RS07115 844235e1249277e7c17986f97e31d2fe 442 PANTHER PTHR11206:SF107 3 434 3.9E-136 T 25-04-2016 APQ13_RS07115 844235e1249277e7c17986f97e31d2fe 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 414 1.7E-81 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 PANTHER PTHR21090 1 419 1.0E-167 T 25-04-2016 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 SUPERFAMILY SSF55205 1 418 6.05E-132 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 3.6E-153 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 Gene3D G3DSA:3.65.10.10 21 221 8.2E-60 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 Gene3D G3DSA:3.65.10.10 222 417 8.6E-61 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 2.0E-87 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APQ13_RS00720 6cb37ec268e2381bff1234a8900df4f6 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 41.051 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 Gene3D G3DSA:3.30.390.50 243 328 4.9E-30 T 25-04-2016 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 326 1.8E-25 T 25-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 PANTHER PTHR12561 1 328 7.8E-113 T 25-04-2016 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 SUPERFAMILY SSF82649 243 328 1.1E-24 T 25-04-2016 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 SUPERFAMILY SSF55681 1 241 5.89E-79 T 25-04-2016 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 Gene3D G3DSA:3.90.1550.10 1 241 5.4E-85 T 25-04-2016 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 46 154 7.7E-8 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 PANTHER PTHR12561:SF3 1 328 7.8E-113 T 25-04-2016 APQ13_RS07075 1a2befb648a4f4840223e124be064104 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 321 1.5E-98 T 25-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 SMART SM00226 2 139 4.1E-24 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 PANTHER PTHR11717 1 141 6.7E-33 T 25-04-2016 APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 Gene3D G3DSA:3.40.50.270 1 140 6.3E-40 T 25-04-2016 APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 2.8E-13 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 78 93 2.8E-13 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.8E-13 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 137 1.1E-28 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APQ13_RS07305 0a248e3008aa14df7b694b985e775dfe 141 SUPERFAMILY SSF52788 1 140 6.15E-40 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 PANTHER PTHR24220 44 265 1.4E-94 T 25-04-2016 APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 PANTHER PTHR24220 9 19 1.4E-94 T 25-04-2016 APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 SUPERFAMILY SSF52540 34 242 8.1E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 Pfam PF00005 ABC transporter 47 178 1.7E-20 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 Gene3D G3DSA:3.40.50.300 3 247 5.0E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 PANTHER PTHR24220:SF117 44 265 1.4E-94 T 25-04-2016 APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 PANTHER PTHR24220:SF117 9 19 1.4E-94 T 25-04-2016 APQ13_RS03990 2e4f33dae9273187f27f5d81af5681ff 405 SMART SM00382 56 246 5.1E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 PANTHER PTHR11904:SF9 1 269 2.5E-121 T 25-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 Pfam PF01048 Phosphorylase superfamily 24 266 1.6E-46 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 SUPERFAMILY SSF53167 3 267 1.34E-86 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 266 9.0E-102 T 25-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 Gene3D G3DSA:3.40.50.1580 4 266 8.4E-100 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 266 2.0E-102 T 25-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 PANTHER PTHR11904 1 269 2.5E-121 T 25-04-2016 IPR001369 PNP/MTAP phosphorylase APQ13_RS02220 fd1a09c761dd846bb52f7d217fe448ab 269 PIRSF PIRSF000477 2 269 2.3E-105 T 25-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 Pfam PF07475 HPr Serine kinase C-terminal domain 131 298 3.5E-72 T 25-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 SUPERFAMILY SSF53795 132 298 1.01E-36 T 25-04-2016 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 Gene3D G3DSA:3.40.50.300 133 306 2.0E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 SUPERFAMILY SSF75138 2 131 5.1E-40 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 PANTHER PTHR30305 1 310 4.0E-136 T 25-04-2016 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 Gene3D G3DSA:3.40.1390.20 2 130 1.9E-46 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 306 41.147 T 25-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 Pfam PF02603 HPr Serine kinase N terminus 3 127 4.2E-40 T 25-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 3 301 6.1E-110 T 25-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 APQ13_RS04330 a4b33a294dae8e325fd88cd19d91c6bf 311 PANTHER PTHR30305:SF1 1 310 4.0E-136 T 25-04-2016 APQ13_RS06660 38126db1a9b502b3a802447da749f413 240 Hamap MF_01124 Adapter protein MecA [mecA]. 1 240 25.279 T 25-04-2016 IPR008681 Negative regulator of genetic competence, MecA APQ13_RS06660 38126db1a9b502b3a802447da749f413 240 PANTHER PTHR39161 2 239 2.0E-60 T 25-04-2016 APQ13_RS06660 38126db1a9b502b3a802447da749f413 240 PANTHER PTHR39161:SF1 2 239 2.0E-60 T 25-04-2016 APQ13_RS06660 38126db1a9b502b3a802447da749f413 240 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 236 7.1E-44 T 25-04-2016 IPR008681 Negative regulator of genetic competence, MecA APQ13_RS06660 38126db1a9b502b3a802447da749f413 240 PIRSF PIRSF029008 1 240 2.6E-66 T 25-04-2016 IPR008681 Negative regulator of genetic competence, MecA APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 128 332 1.5E-47 T 25-04-2016 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 PANTHER PTHR10824:SF4 83 296 1.4E-12 T 25-04-2016 APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 SUPERFAMILY SSF53474 245 302 9.62E-23 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 SUPERFAMILY SSF53474 64 184 9.62E-23 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 Gene3D G3DSA:3.40.50.1820 217 300 1.5E-21 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 Gene3D G3DSA:3.40.50.1820 46 183 1.5E-21 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS00230 d1550eb2099e82565b6ecbecb5574389 339 PANTHER PTHR10824 83 296 1.4E-12 T 25-04-2016 APQ13_RS04400 655b8b0f24ef533720f5c0068c63fc83 402 Gene3D G3DSA:3.40.50.1820 135 400 6.8E-55 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04400 655b8b0f24ef533720f5c0068c63fc83 402 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 208 238 - T 25-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 APQ13_RS04400 655b8b0f24ef533720f5c0068c63fc83 402 SUPERFAMILY SSF53474 22 265 6.95E-43 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04400 655b8b0f24ef533720f5c0068c63fc83 402 SUPERFAMILY SSF53474 292 399 6.95E-43 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS04400 655b8b0f24ef533720f5c0068c63fc83 402 Pfam PF12146 Serine aminopeptidase, S33 182 359 8.7E-7 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 APQ13_RS04400 655b8b0f24ef533720f5c0068c63fc83 402 Gene3D G3DSA:1.20.1440.110 19 131 1.5E-37 T 25-04-2016 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 Pfam PF01264 Chorismate synthase 1 363 2.0E-114 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 34.528 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 PANTHER PTHR21085 1 388 9.7E-176 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 SUPERFAMILY SSF103263 1 387 1.83E-144 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 Gene3D G3DSA:3.60.150.10 1 387 2.4E-145 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 129 145 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 PIRSF PIRSF001456 1 380 1.7E-122 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 2.4E-137 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04195 0560f69bfdfad900a201098e65d20064 388 PANTHER PTHR21085:SF0 1 388 9.7E-176 T 25-04-2016 APQ13_RS02185 3e3a2d62c3a0ff28b2d16c599d8b8147 116 SUPERFAMILY SSF54427 14 110 1.7E-15 T 25-04-2016 IPR032710 NTF2-like domain APQ13_RS02185 3e3a2d62c3a0ff28b2d16c599d8b8147 116 Gene3D G3DSA:3.10.450.50 19 112 2.8E-9 T 25-04-2016 IPR032710 NTF2-like domain APQ13_RS02185 3e3a2d62c3a0ff28b2d16c599d8b8147 116 Pfam PF12680 SnoaL-like domain 17 109 2.5E-6 T 25-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 PANTHER PTHR11751:SF294 149 457 3.6E-46 T 25-04-2016 APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 Gene3D G3DSA:3.40.640.10 133 350 6.5E-52 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 SMART SM00345 28 87 2.4E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 SUPERFAMILY SSF46785 22 91 1.09E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 Pfam PF00155 Aminotransferase class I and II 148 444 7.2E-23 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 87 8.9E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 SUPERFAMILY SSF53383 96 456 3.48E-59 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 Gene3D G3DSA:1.10.10.10 21 88 2.1E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04830 bdc040f879f99954a168df5005b6e661 457 PANTHER PTHR11751 149 457 3.6E-46 T 25-04-2016 APQ13_RS03670 21de52cc1dae7bee3e3b0197fc7426a0 124 SUPERFAMILY SSF54611 1 124 2.13E-49 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APQ13_RS03670 21de52cc1dae7bee3e3b0197fc7426a0 124 PIRSF PIRSF031568 1 124 3.8E-62 T 25-04-2016 IPR009530 Protein of unknown function DUF1149 APQ13_RS03670 21de52cc1dae7bee3e3b0197fc7426a0 124 Gene3D G3DSA:3.10.420.10 1 124 1.7E-52 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APQ13_RS03670 21de52cc1dae7bee3e3b0197fc7426a0 124 Pfam PF06619 Protein of unknown function (DUF1149) 1 124 9.1E-49 T 25-04-2016 IPR009530 Protein of unknown function DUF1149 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 PANTHER PTHR26402:SF50 6 226 1.7E-75 T 25-04-2016 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 SUPERFAMILY SSF52172 4 177 8.64E-39 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 SMART SM00448 6 117 7.0E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 3.8E-23 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 Gene3D G3DSA:3.40.50.2300 4 127 2.8E-35 T 25-04-2016 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 SMART SM00862 150 226 2.0E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 Gene3D G3DSA:1.10.10.10 128 228 3.7E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 Pfam PF00072 Response regulator receiver domain 8 117 1.9E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS02585 70ff7eaf4b71e48a12b5624c4ed0e38c 229 PANTHER PTHR26402 6 226 1.7E-75 T 25-04-2016 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 SUPERFAMILY SSF51717 9 265 1.7E-91 T 25-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 14 29 - T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 48 61 - T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 Pfam PF00809 Pterin binding enzyme 15 250 6.1E-83 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 Gene3D G3DSA:3.20.20.20 7 265 1.4E-102 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 PANTHER PTHR20941:SF1 14 266 4.0E-110 T 25-04-2016 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 263 1.6E-96 T 25-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03370 06f6fda768376a64b2429e3abc68ce37 266 PANTHER PTHR20941 14 266 4.0E-110 T 25-04-2016 APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 Gene3D G3DSA:3.40.630.30 1 161 1.6E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 PANTHER PTHR36174 1 410 1.2E-136 T 25-04-2016 APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 PANTHER PTHR36174:SF2 1 410 1.2E-136 T 25-04-2016 APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 Gene3D G3DSA:1.20.58.90 241 297 3.5E-5 T 25-04-2016 APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 SUPERFAMILY SSF55729 162 239 4.45E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 SUPERFAMILY SSF55729 306 402 4.45E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 SUPERFAMILY SSF55729 1 159 5.83E-42 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 Pfam PF02388 FemAB family 6 406 1.3E-147 T 25-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 Gene3D G3DSA:3.40.630.30 162 238 3.6E-47 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 Gene3D G3DSA:3.40.630.30 305 382 3.6E-47 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS04485 6b83ac280aedf0c3ddc6c194d26e3876 410 SUPERFAMILY SSF46589 239 302 3.71E-18 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 SMART SM00382 28 228 1.7E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 SUPERFAMILY SSF52540 3 250 1.3E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 PANTHER PTHR24220:SF358 5 110 3.8E-124 T 25-04-2016 APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 PANTHER PTHR24220:SF358 126 254 3.8E-124 T 25-04-2016 APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 PANTHER PTHR24220 5 110 3.8E-124 T 25-04-2016 APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 PANTHER PTHR24220 126 254 3.8E-124 T 25-04-2016 APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 Pfam PF00005 ABC transporter 21 179 7.8E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 Gene3D G3DSA:3.40.50.300 3 249 4.1E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00290 e7b363c4b8a08f2ed24aed1c29ee559a 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 2.4E-11 T 25-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APQ13_RS09665 06083f8c7bf8c85d87c1b981d0abe07c 140 Gene3D G3DSA:3.10.129.10 1 138 8.4E-56 T 25-04-2016 IPR029069 HotDog domain APQ13_RS09665 06083f8c7bf8c85d87c1b981d0abe07c 140 SUPERFAMILY SSF54637 5 138 2.23E-47 T 25-04-2016 IPR029069 HotDog domain APQ13_RS09665 06083f8c7bf8c85d87c1b981d0abe07c 140 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 1.9E-61 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APQ13_RS09665 06083f8c7bf8c85d87c1b981d0abe07c 140 Pfam PF07977 FabA-like domain 11 131 2.9E-36 T 25-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APQ13_RS09665 06083f8c7bf8c85d87c1b981d0abe07c 140 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 140 33.973 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APQ13_RS09665 06083f8c7bf8c85d87c1b981d0abe07c 140 PANTHER PTHR30272 1 140 1.7E-76 T 25-04-2016 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 PANTHER PTHR10457:SF4 23 320 2.7E-48 T 25-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 SUPERFAMILY SSF54211 21 202 9.11E-40 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 23 302 3.7E-79 T 25-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 Gene3D G3DSA:3.30.70.890 195 325 2.7E-36 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 Gene3D G3DSA:3.30.230.10 20 194 3.8E-36 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 PRINTS PR00959 Mevalonate kinase family signature 108 130 9.5E-22 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 PRINTS PR00959 Mevalonate kinase family signature 151 170 9.5E-22 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 PRINTS PR00959 Mevalonate kinase family signature 23 47 9.5E-22 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 PRINTS PR00959 Mevalonate kinase family signature 287 304 9.5E-22 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 SUPERFAMILY SSF55060 186 330 1.35E-30 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 Pfam PF00288 GHMP kinases N terminal domain 103 164 5.2E-15 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 PANTHER PTHR10457 23 320 2.7E-48 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APQ13_RS06880 44efb14ae19dbf22b773ed252dbd88d5 332 Pfam PF08544 GHMP kinases C terminal 241 320 9.2E-16 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 Gene3D G3DSA:1.20.58.110 1 78 6.7E-21 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 78 9.0E-19 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 76 3.0E-16 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 78 15.573 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 Pfam PF01649 Ribosomal protein S20 2 76 7.6E-20 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 SUPERFAMILY SSF46992 3 77 1.57E-21 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02675 6cab5346e931f6ebd2d0d4819c431deb 78 PANTHER PTHR33398 2 78 1.1E-23 T 25-04-2016 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 PIRSF PIRSF001430 1 249 7.3E-77 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 34.612 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 SUPERFAMILY SSF55120 1 249 3.17E-81 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 PANTHER PTHR11142 1 249 1.2E-87 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 Pfam PF01416 tRNA pseudouridine synthase 144 248 2.9E-28 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 Pfam PF01416 tRNA pseudouridine synthase 6 104 1.2E-11 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 Gene3D G3DSA:3.30.70.580 2 105 3.6E-36 T 25-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 PANTHER PTHR11142:SF0 1 249 1.2E-87 T 25-04-2016 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 Gene3D G3DSA:3.30.70.660 108 248 3.4E-42 T 25-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS07225 082c385dff9312fefdb94b1accb83a74 249 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 242 2.1E-63 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 Gene3D G3DSA:3.40.640.10 48 241 1.1E-52 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 Gene3D G3DSA:3.90.1150.10 242 370 1.4E-18 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 PANTHER PTHR11751 37 373 1.0E-81 T 25-04-2016 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 PANTHER PTHR11751:SF388 37 373 1.0E-81 T 25-04-2016 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 Pfam PF00155 Aminotransferase class I and II 51 363 8.5E-44 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS04050 1f6a6c9116b60104d12c3283cd9922c6 373 SUPERFAMILY SSF53383 35 370 1.18E-76 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS03060 822cfc2b63fa02029b8f1c20ce723ba2 296 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 21 290 9.8E-70 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS03060 822cfc2b63fa02029b8f1c20ce723ba2 296 SUPERFAMILY SSF55120 72 286 2.56E-66 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS03060 822cfc2b63fa02029b8f1c20ce723ba2 296 PANTHER PTHR11079:SF73 21 295 3.3E-79 T 25-04-2016 APQ13_RS03060 822cfc2b63fa02029b8f1c20ce723ba2 296 PANTHER PTHR11079 21 295 3.3E-79 T 25-04-2016 APQ13_RS03060 822cfc2b63fa02029b8f1c20ce723ba2 296 Pfam PF00849 RNA pseudouridylate synthase 84 236 1.6E-30 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS03060 822cfc2b63fa02029b8f1c20ce723ba2 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 127 141 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 172 4.8E-44 T 25-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 Gene3D G3DSA:3.40.50.720 4 184 2.3E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 Gene3D G3DSA:1.10.1040.10 185 230 2.7E-12 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 SUPERFAMILY SSF51735 2 180 1.04E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 PANTHER PTHR23309 4 229 1.5E-63 T 25-04-2016 APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 SUPERFAMILY SSF48179 183 229 1.11E-10 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 PIRSF PIRSF000105 1 236 2.4E-61 T 25-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 APQ13_RS08195 a1457812472a9aa3a295e338e2e1bfe2 238 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 183 229 2.5E-13 T 25-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APQ13_RS04525 bd7b68daa95cd75808f58f6e11638e9b 189 PANTHER PTHR41316 1 189 3.4E-39 T 25-04-2016 APQ13_RS04525 bd7b68daa95cd75808f58f6e11638e9b 189 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 6 183 2.1E-61 T 25-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 APQ13_RS04525 bd7b68daa95cd75808f58f6e11638e9b 189 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 8 181 8.8E-61 T 25-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 APQ13_RS09190 b5469f826f1e2565713446c3595db4af 142 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 7 142 22.55 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 APQ13_RS09190 b5469f826f1e2565713446c3595db4af 142 PANTHER PTHR11078 1 142 2.0E-41 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 APQ13_RS09190 b5469f826f1e2565713446c3595db4af 142 SUPERFAMILY SSF48013 8 137 3.79E-36 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APQ13_RS09190 b5469f826f1e2565713446c3595db4af 142 Gene3D G3DSA:1.10.940.10 8 140 1.1E-41 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APQ13_RS09190 b5469f826f1e2565713446c3595db4af 142 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 8 138 6.1E-40 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 APQ13_RS09190 b5469f826f1e2565713446c3595db4af 142 Pfam PF01029 NusB family 11 138 1.1E-32 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APQ13_RS03830 6adb3a91a34306e07f3d6ad8eb4b13b5 433 PANTHER PTHR32347 1 426 3.3E-61 T 25-04-2016 APQ13_RS03830 6adb3a91a34306e07f3d6ad8eb4b13b5 433 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 301 2.8E-12 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APQ13_RS03830 6adb3a91a34306e07f3d6ad8eb4b13b5 433 Gene3D G3DSA:2.40.50.100 220 238 9.1E-6 T 25-04-2016 APQ13_RS03830 6adb3a91a34306e07f3d6ad8eb4b13b5 433 Gene3D G3DSA:2.40.50.100 87 107 9.1E-6 T 25-04-2016 APQ13_RS03830 6adb3a91a34306e07f3d6ad8eb4b13b5 433 PANTHER PTHR32347:SF14 1 426 3.3E-61 T 25-04-2016 APQ13_RS03025 972e107f5d535bd0a461a30194efe0eb 115 SUPERFAMILY SSF160800 1 112 9.42E-43 T 25-04-2016 IPR014965 Putative amino acid metabolism APQ13_RS03025 972e107f5d535bd0a461a30194efe0eb 115 Pfam PF08866 Putative amino acid metabolism 1 111 9.9E-44 T 25-04-2016 IPR014965 Putative amino acid metabolism APQ13_RS03025 972e107f5d535bd0a461a30194efe0eb 115 Gene3D G3DSA:3.30.1820.10 1 112 8.2E-48 T 25-04-2016 IPR014965 Putative amino acid metabolism APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 Hamap MF_00269 Probable thiol peroxidase [tpx]. 1 161 37.013 T 25-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 PANTHER PTHR10681:SF81 1 161 5.9E-52 T 25-04-2016 APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 Gene3D G3DSA:3.40.30.10 2 161 6.6E-48 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 SUPERFAMILY SSF52833 2 158 2.94E-43 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 Pfam PF08534 Redoxin 17 157 4.0E-26 T 25-04-2016 IPR013740 Redoxin GO:0016491 APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 25-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 APQ13_RS03570 66f2ba281ccad38050168faf65fd1c39 161 PANTHER PTHR10681 1 161 5.9E-52 T 25-04-2016 APQ13_RS05990 9c4e4d4d796435ada57ff2f930bd922f 144 PANTHER PTHR23091:SF122 2 139 3.3E-23 T 25-04-2016 APQ13_RS05990 9c4e4d4d796435ada57ff2f930bd922f 144 SUPERFAMILY SSF55729 10 138 2.7E-26 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS05990 9c4e4d4d796435ada57ff2f930bd922f 144 PANTHER PTHR23091 2 139 3.3E-23 T 25-04-2016 APQ13_RS05990 9c4e4d4d796435ada57ff2f930bd922f 144 Gene3D G3DSA:3.40.630.30 4 139 2.3E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS05990 9c4e4d4d796435ada57ff2f930bd922f 144 Pfam PF13508 Acetyltransferase (GNAT) domain 43 117 8.0E-15 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS05990 9c4e4d4d796435ada57ff2f930bd922f 144 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 136 6.6E-37 T 25-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 APQ13_RS07265 e8cb6eecd1fc6663e3c5f87b20b112c5 249 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 92 225 1.0E-38 T 25-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 APQ13_RS07265 e8cb6eecd1fc6663e3c5f87b20b112c5 249 Gene3D G3DSA:3.30.1380.10 116 182 7.3E-8 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APQ13_RS07265 e8cb6eecd1fc6663e3c5f87b20b112c5 249 SUPERFAMILY SSF55166 84 234 1.18E-26 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APQ13_RS07265 e8cb6eecd1fc6663e3c5f87b20b112c5 249 PANTHER PTHR34385 1 248 5.1E-38 T 25-04-2016 APQ13_RS07265 e8cb6eecd1fc6663e3c5f87b20b112c5 249 PANTHER PTHR34385:SF1 1 248 5.1E-38 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 PANTHER PTHR30239 1 157 1.8E-74 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 Pfam PF13710 ACT domain 12 74 1.9E-13 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.2E-54 T 25-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 Gene3D G3DSA:3.30.70.1150 84 158 2.0E-28 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 SUPERFAMILY SSF55021 80 158 3.36E-23 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 2.0E-29 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 SUPERFAMILY SSF55021 2 80 9.43E-17 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 Gene3D G3DSA:3.30.70.260 1 79 3.0E-26 T 25-04-2016 APQ13_RS06720 d7ef2abcea374e48ee14cd4f53afa0f9 160 Pfam PF10369 Small subunit of acetolactate synthase 85 157 1.1E-26 T 25-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 PANTHER PTHR11751 5 384 1.7E-116 T 25-04-2016 APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 PANTHER PTHR11751:SF21 5 384 1.7E-116 T 25-04-2016 APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 Gene3D G3DSA:3.90.1150.10 250 386 2.5E-36 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 Gene3D G3DSA:3.40.640.10 42 249 3.1E-47 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 382 1.3E-119 T 25-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 SUPERFAMILY SSF53383 15 385 5.26E-91 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS00250 2f1e21b1bd52bb8f2a1f5ca216a70313 387 Pfam PF00155 Aminotransferase class I and II 36 381 2.0E-44 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 Gene3D G3DSA:1.50.10.10 2 367 3.6E-83 T 25-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 SUPERFAMILY SSF48208 9 367 1.93E-75 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 356 369 6.0E-18 T 25-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 129 147 6.0E-18 T 25-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 66 79 6.0E-18 T 25-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 235 246 6.0E-18 T 25-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 266 275 6.0E-18 T 25-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 129 147 - T 25-04-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS01315 b8b3245b8ec0c74de3694e2715338e4a 369 Pfam PF01270 Glycosyl hydrolases family 8 37 367 6.0E-30 T 25-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APQ13_RS06380 029816ba1cac19c65984c8528d52bca0 337 Gene3D G3DSA:3.40.50.620 157 296 2.7E-26 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS06380 029816ba1cac19c65984c8528d52bca0 337 PANTHER PTHR30336:SF2 34 337 2.7E-44 T 25-04-2016 APQ13_RS06380 029816ba1cac19c65984c8528d52bca0 337 PANTHER PTHR30336 34 337 2.7E-44 T 25-04-2016 APQ13_RS06380 029816ba1cac19c65984c8528d52bca0 337 Pfam PF02698 DUF218 domain 163 310 2.0E-28 T 25-04-2016 IPR003848 Domain of unknown function DUF218 APQ13_RS01105 74223970565c00b40ae4fb264eb41037 208 PANTHER PTHR10992 2 205 3.2E-19 T 25-04-2016 APQ13_RS01105 74223970565c00b40ae4fb264eb41037 208 PANTHER PTHR10992:SF732 2 205 3.2E-19 T 25-04-2016 APQ13_RS01105 74223970565c00b40ae4fb264eb41037 208 SUPERFAMILY SSF53474 3 204 8.11E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01105 74223970565c00b40ae4fb264eb41037 208 Gene3D G3DSA:3.40.50.1820 3 203 7.9E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01105 74223970565c00b40ae4fb264eb41037 208 Pfam PF12697 Alpha/beta hydrolase family 3 196 9.3E-11 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 Gene3D G3DSA:3.30.200.20 5 92 4.9E-38 T 25-04-2016 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 PANTHER PTHR11609:SF2 3 231 1.0E-113 T 25-04-2016 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 3 233 32.763 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 PANTHER PTHR11609 3 231 1.0E-113 T 25-04-2016 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 ProSitePatterns PS01058 SAICAR synthetase signature 2. 172 180 - T 25-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 Pfam PF01259 SAICAR synthetase 5 226 1.3E-61 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 214 2.4E-69 T 25-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 SUPERFAMILY SSF56104 3 232 7.52E-78 T 25-04-2016 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 Gene3D G3DSA:3.30.470.20 93 218 1.4E-50 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS07440 99043115b23df8b8d1014309bee48ec4 235 ProSitePatterns PS01057 SAICAR synthetase signature 1. 85 99 - T 25-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APQ13_RS07700 fa3ebc0a0f1246ccbabfbf89c301bce4 857 PANTHER PTHR38454 1 851 3.2E-89 T 25-04-2016 APQ13_RS07700 fa3ebc0a0f1246ccbabfbf89c301bce4 857 Pfam PF09586 Bacterial membrane protein YfhO 18 837 3.5E-248 T 25-04-2016 IPR018580 Uncharacterised protein family YfhO APQ13_RS07700 fa3ebc0a0f1246ccbabfbf89c301bce4 857 PANTHER PTHR38454:SF1 1 851 3.2E-89 T 25-04-2016 APQ13_RS04535 9ed44ee581cb7eed966bda4494eab822 280 Pfam PF04018 Domain of unknown function (DUF368) 19 236 6.6E-35 T 25-04-2016 IPR007163 Protein of unknown function DUF368 APQ13_RS04535 9ed44ee581cb7eed966bda4494eab822 280 PANTHER PTHR37308 1 278 5.0E-64 T 25-04-2016 APQ13_RS03490 3b7f1ff17631ded584b4523dbf65b296 156 SUPERFAMILY SSF46955 34 111 2.44E-5 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS03490 3b7f1ff17631ded584b4523dbf65b296 156 Pfam PF08876 Domain of unknown function (DUF1836) 7 105 3.1E-37 T 25-04-2016 IPR014975 Protein of unknown function DUF1836 APQ13_RS03490 3b7f1ff17631ded584b4523dbf65b296 156 PANTHER PTHR40056 4 156 5.7E-25 T 25-04-2016 APQ13_RS03490 3b7f1ff17631ded584b4523dbf65b296 156 Gene3D G3DSA:1.10.1660.10 34 125 9.5E-5 T 25-04-2016 APQ13_RS03490 3b7f1ff17631ded584b4523dbf65b296 156 PANTHER PTHR40056:SF1 4 156 5.7E-25 T 25-04-2016 APQ13_RS02705 3ca456a08216c7fb074c85c4fa1775a0 349 Gene3D G3DSA:3.40.50.2300 33 167 1.0E-49 T 25-04-2016 APQ13_RS02705 3ca456a08216c7fb074c85c4fa1775a0 349 Gene3D G3DSA:3.40.50.2300 168 241 3.6E-11 T 25-04-2016 APQ13_RS02705 3ca456a08216c7fb074c85c4fa1775a0 349 PANTHER PTHR34296 1 349 1.2E-130 T 25-04-2016 APQ13_RS02705 3ca456a08216c7fb074c85c4fa1775a0 349 Pfam PF02608 Basic membrane protein 38 348 3.6E-74 T 25-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 APQ13_RS02705 3ca456a08216c7fb074c85c4fa1775a0 349 SUPERFAMILY SSF53822 49 303 4.97E-17 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS02705 3ca456a08216c7fb074c85c4fa1775a0 349 PANTHER PTHR34296:SF2 1 349 1.2E-130 T 25-04-2016 APQ13_RS07315 5c954a0ca5a050161c8d666600b48a95 614 Pfam PF14262 Domain of unknown function (DUF4353) 392 471 1.2E-6 T 25-04-2016 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 APQ13_RS07315 5c954a0ca5a050161c8d666600b48a95 614 Pfam PF14262 Domain of unknown function (DUF4353) 192 413 7.7E-26 T 25-04-2016 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 25-04-2016 APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 SUPERFAMILY SSF56784 1 266 9.7E-61 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 3.7E-58 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 PANTHER PTHR10000:SF27 1 268 1.2E-80 T 25-04-2016 APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 Gene3D G3DSA:3.40.50.1000 1 74 2.2E-47 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 Gene3D G3DSA:3.40.50.1000 182 266 2.2E-47 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 PANTHER PTHR10000 1 268 1.2E-80 T 25-04-2016 APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 Gene3D G3DSA:3.30.1240.10 86 181 2.7E-19 T 25-04-2016 APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 1.2E-49 T 25-04-2016 IPR000150 Cof protein GO:0016787 APQ13_RS02765 d8f670a0e099e2860e900c5dc03d0bde 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 235 2.1E-23 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 SMART SM00331 7 241 8.6E-38 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 Gene3D G3DSA:3.60.40.10 2 240 6.1E-64 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 SUPERFAMILY SSF81606 2 240 9.81E-61 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 Pfam PF13672 Protein phosphatase 2C 12 209 1.6E-14 T 25-04-2016 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 PANTHER PTHR13832:SF278 1 239 1.0E-57 T 25-04-2016 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 PANTHER PTHR13832 1 239 1.0E-57 T 25-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 APQ13_RS05565 211eb52c451cc468def8a6a5af1ac6ea 247 SMART SM00332 1 239 5.7E-19 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 202 3.3E-45 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 PANTHER PTHR31760 4 237 2.7E-79 T 25-04-2016 APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 PIRSF PIRSF003078 1 221 2.8E-50 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 SUPERFAMILY SSF53335 1 237 6.05E-45 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 215 26.943 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 PANTHER PTHR31760:SF0 4 237 2.7E-79 T 25-04-2016 APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 Gene3D G3DSA:3.40.50.150 3 237 2.1E-72 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS08870 7a1b73c9c498bc57960b659d2571375b 237 Pfam PF02527 rRNA small subunit methyltransferase G 21 192 2.4E-47 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 Gene3D G3DSA:3.30.1180.10 154 277 2.7E-40 T 25-04-2016 APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 SUPERFAMILY SSF82549 1 278 3.14E-83 T 25-04-2016 APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 PANTHER PTHR33434 1 279 1.3E-68 T 25-04-2016 APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 PANTHER PTHR33434:SF2 1 279 1.3E-68 T 25-04-2016 APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 Gene3D G3DSA:3.40.50.10170 1 149 2.8E-37 T 25-04-2016 APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 279 3.1E-86 T 25-04-2016 IPR003797 DegV APQ13_RS03665 aa7a66750bee46d041b5dcbd12b923f2 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 277 5.5E-89 T 25-04-2016 IPR003797 DegV APQ13_RS01655 7c48abef9e842eb72a2b850bd9143764 240 Pfam PF00975 Thioesterase domain 10 236 5.6E-24 T 25-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 APQ13_RS01655 7c48abef9e842eb72a2b850bd9143764 240 PANTHER PTHR11487 10 234 2.0E-43 T 25-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 APQ13_RS01655 7c48abef9e842eb72a2b850bd9143764 240 SUPERFAMILY SSF53474 5 238 2.81E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01655 7c48abef9e842eb72a2b850bd9143764 240 Gene3D G3DSA:3.40.50.1820 4 117 4.1E-20 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01655 7c48abef9e842eb72a2b850bd9143764 240 Gene3D G3DSA:3.40.50.1820 175 238 4.1E-20 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 2 374 63.382 T 25-04-2016 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941|UniPathway: UPA00034 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 Gene3D G3DSA:3.40.630.10 4 171 7.2E-74 T 25-04-2016 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 Gene3D G3DSA:3.40.630.10 292 369 7.2E-74 T 25-04-2016 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 SUPERFAMILY SSF53187 4 190 7.78E-68 T 25-04-2016 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 SUPERFAMILY SSF53187 292 367 7.78E-68 T 25-04-2016 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 PANTHER PTHR11014:SF98 4 376 3.5E-206 T 25-04-2016 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 SUPERFAMILY SSF55031 174 290 2.36E-29 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 Gene3D G3DSA:3.30.70.360 174 291 3.1E-39 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 Pfam PF07687 Peptidase dimerisation domain 175 270 1.7E-9 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 PANTHER PTHR11014 4 376 3.5E-206 T 25-04-2016 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 PIRSF PIRSF005962 1 376 1.8E-103 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 5 362 3.7E-87 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 APQ13_RS06310 703788c7aaf00060c480c242a5959926 376 Pfam PF01546 Peptidase family M20/M25/M40 68 363 2.0E-24 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 Gene3D G3DSA:1.10.3660.10 225 282 4.3E-4 T 25-04-2016 APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 SUPERFAMILY SSF48179 177 285 1.47E-33 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 Pfam PF02153 Prephenate dehydrogenase 18 276 6.8E-71 T 25-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 PANTHER PTHR21363 2 365 1.1E-72 T 25-04-2016 APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 PANTHER PTHR21363:SF0 2 365 1.1E-72 T 25-04-2016 APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 Gene3D G3DSA:3.40.50.720 1 183 2.0E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04190 82d11a94eacd7fe9cec7b379489411f1 368 SUPERFAMILY SSF51735 6 173 8.32E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 PANTHER PTHR12383:SF14 1 195 2.2E-43 T 25-04-2016 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 187 5.2E-42 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 SUPERFAMILY SSF51306 22 192 2.22E-48 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 ProSitePatterns PS00760 Signal peptidases I lysine active site. 71 83 - T 25-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 146 165 1.53E-18 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 1.53E-18 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 69 81 1.53E-18 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 Pfam PF00717 Peptidase S24-like 30 93 5.3E-17 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 PANTHER PTHR12383 1 195 2.2E-43 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 Gene3D G3DSA:2.10.109.10 22 79 1.1E-27 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 Gene3D G3DSA:2.10.109.10 146 193 1.1E-27 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APQ13_RS09065 f432bf3fb8bc349ce39d6ef0ea0321da 195 ProSitePatterns PS00501 Signal peptidases I serine active site. 33 40 - T 25-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 Gene3D G3DSA:4.10.950.10 196 274 9.5E-34 T 25-04-2016 IPR014726 Ribosomal protein L2, domain 3 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.9E-55 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 SUPERFAMILY SSF50104 126 273 6.62E-58 T 25-04-2016 IPR008991 Translation protein SH3-like domain APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 SMART SM01383 42 118 4.0E-46 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 PIRSF PIRSF002158 5 277 4.6E-98 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 Gene3D G3DSA:2.30.30.30 118 195 2.2E-34 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.6E-34 T 25-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 25-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 PANTHER PTHR13691 3 276 4.6E-147 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 SMART SM01382 124 253 1.3E-87 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 SUPERFAMILY SSF50249 3 125 2.5E-51 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 Gene3D G3DSA:2.40.50.140 2 114 1.5E-52 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.046 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APQ13_RS08415 d62fe92e0cb99f05391884702afc09a5 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 7.8E-135 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APQ13_RS09005 cc361d255e71098bdebb583605f36a21 90 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 78 6.3E-7 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 APQ13_RS04585 1f1734b97b645ac070cd5787f7a56e0f 161 ProDom PD091538 PORE-FORMING FORMING PORE PEPTIDE EBSA PEPTIDE GBS1458 SMU.692 SAG1388 7 135 3.0E-58 T 25-04-2016 IPR020215 Pore-forming protein, EbsA APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 Pfam PF00005 ABC transporter 21 156 3.9E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 SMART SM00382 30 204 1.3E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 PANTHER PTHR24220 245 280 7.4E-70 T 25-04-2016 APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 PANTHER PTHR24220 7 219 7.4E-70 T 25-04-2016 APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 SUPERFAMILY SSF52540 3 218 6.47E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 Gene3D G3DSA:3.40.50.300 2 222 9.5E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 PANTHER PTHR24220:SF165 245 280 7.4E-70 T 25-04-2016 APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 PANTHER PTHR24220:SF165 7 219 7.4E-70 T 25-04-2016 APQ13_RS00815 d2a6ae3ec3a360a9077d97b0c37ecb29 293 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 PANTHER PTHR12826 202 534 3.2E-140 T 25-04-2016 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 Pfam PF00013 KH domain 228 283 1.4E-7 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 5 535 8.0E-233 T 25-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 SMART SM00322 223 290 3.8E-9 T 25-04-2016 IPR004087 K Homology domain GO:0003676 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 SMART SM00471 347 453 1.6E-13 T 25-04-2016 IPR003607 HD/PDEase domain APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 Gene3D G3DSA:1.10.3210.10 331 511 5.6E-42 T 25-04-2016 IPR006674 HD domain APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 Pfam PF12072 Domain of unknown function (DUF3552) 4 220 2.5E-43 T 25-04-2016 IPR022711 Ribonuclease Y, N-terminal APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 Gene3D G3DSA:3.30.1370.10 236 313 2.3E-8 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 SUPERFAMILY SSF109604 331 482 5.61E-28 T 25-04-2016 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 Hamap MF_00335 Ribonuclease Y [rny]. 2 535 24.863 T 25-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 TIGRFAM TIGR00277 HDIG: HDIG domain 347 424 4.6E-25 T 25-04-2016 IPR006675 HDIG domain APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 SUPERFAMILY SSF54791 223 319 2.06E-17 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APQ13_RS05595 42db164353ff3e921ae5941076bdc500 535 Pfam PF01966 HD domain 352 442 1.2E-18 T 25-04-2016 IPR006674 HD domain APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 2.2E-28 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 Gene3D G3DSA:3.10.20.70 5 109 9.4E-38 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 PANTHER PTHR20852 1 448 6.1E-186 T 25-04-2016 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 446 6.7E-169 T 25-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 25-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 PANTHER PTHR20852:SF7 1 448 6.1E-186 T 25-04-2016 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 SMART SM01230 106 358 1.5E-132 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 Gene3D G3DSA:3.30.590.10 110 434 3.7E-123 T 25-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 SUPERFAMILY SSF55931 107 446 4.02E-124 T 25-04-2016 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 SUPERFAMILY SSF54368 4 105 1.03E-29 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS06085 aaf9b6920514d41a78ca5a7d5699f166 448 Pfam PF00120 Glutamine synthetase, catalytic domain 107 444 3.6E-137 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APQ13_RS03585 0700d07e4f18d0611c88a895edfae23a 144 PANTHER PTHR33164 5 142 6.3E-16 T 25-04-2016 APQ13_RS03585 0700d07e4f18d0611c88a895edfae23a 144 SMART SM00347 24 126 1.8E-9 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APQ13_RS03585 0700d07e4f18d0611c88a895edfae23a 144 Gene3D G3DSA:1.10.10.10 3 140 2.2E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03585 0700d07e4f18d0611c88a895edfae23a 144 Pfam PF12802 MarR family 31 89 1.7E-9 T 25-04-2016 APQ13_RS03585 0700d07e4f18d0611c88a895edfae23a 144 SUPERFAMILY SSF46785 11 139 1.29E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS03585 0700d07e4f18d0611c88a895edfae23a 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 99 - T 25-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 Gene3D G3DSA:1.20.1090.10 159 362 1.2E-63 T 25-04-2016 APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 Gene3D G3DSA:3.40.50.1970 2 157 4.8E-42 T 25-04-2016 APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 PANTHER PTHR11496:SF57 1 361 9.4E-163 T 25-04-2016 APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 PIRSF PIRSF000112 1 360 5.3E-95 T 25-04-2016 APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 PANTHER PTHR11496 1 361 9.4E-163 T 25-04-2016 APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 347 5.2E-61 T 25-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APQ13_RS05510 6792269c8cc7792d0a036d93ca7605dd 363 SUPERFAMILY SSF56796 1 358 2.22E-85 T 25-04-2016 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 PANTHER PTHR26402:SF501 1 121 1.6E-25 T 25-04-2016 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 Pfam PF00072 Response regulator receiver domain 3 114 6.9E-18 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 SMART SM00850 146 243 7.3E-26 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 Gene3D G3DSA:2.20.25.10 207 243 1.7E-14 T 25-04-2016 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 SMART SM00448 1 114 1.4E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 Pfam PF04397 LytTr DNA-binding domain 147 242 1.1E-25 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 SUPERFAMILY SSF52172 1 123 5.41E-23 T 25-04-2016 IPR011006 CheY-like superfamily APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 Gene3D G3DSA:3.40.50.2300 1 122 1.9E-23 T 25-04-2016 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 Gene3D G3DSA:2.40.50.40 140 205 1.4E-10 T 25-04-2016 APQ13_RS05100 3edee044177c1a77d5b5a7047c7af9b4 244 PANTHER PTHR26402 1 121 1.6E-25 T 25-04-2016 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 2.6E-13 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 97.858 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 PANTHER PTHR32182:SF0 1 345 3.9E-72 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 ProSitePatterns PS00618 RecF protein signature 2. 305 323 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 1.4E-126 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 PANTHER PTHR32182 1 345 3.9E-72 T 25-04-2016 APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 Gene3D G3DSA:3.40.50.300 1 166 5.4E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 Gene3D G3DSA:3.40.50.300 234 360 5.4E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07720 90a8b4a3f6057b0fa78b01ca2324ad8f 363 SUPERFAMILY SSF52540 1 360 3.76E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 PANTHER PTHR11695 15 320 5.3E-55 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 Gene3D G3DSA:3.40.50.720 146 263 2.9E-16 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 9.2E-10 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 SUPERFAMILY SSF50129 1 149 3.2E-31 T 25-04-2016 IPR011032 GroES-like APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 PANTHER PTHR11695:SF294 15 320 5.3E-55 T 25-04-2016 APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 Gene3D G3DSA:3.90.180.10 1 145 9.6E-32 T 25-04-2016 IPR011032 GroES-like APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 SMART SM00829 10 320 1.3E-6 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 SUPERFAMILY SSF51735 128 278 3.74E-24 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS04825 e59d10a96256de71d2944efcd7b2621c 322 Pfam PF00107 Zinc-binding dehydrogenase 157 274 4.7E-12 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APQ13_RS05535 fadaa07ffacb60a5b5120ab5be550c1e 128 SUPERFAMILY SSF50249 1 83 3.23E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS05535 fadaa07ffacb60a5b5120ab5be550c1e 128 Gene3D G3DSA:2.40.50.140 2 80 3.9E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS05535 fadaa07ffacb60a5b5120ab5be550c1e 128 SMART SM00316 2 73 1.7E-22 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS05535 fadaa07ffacb60a5b5120ab5be550c1e 128 Pfam PF00575 S1 RNA binding domain 2 73 3.8E-17 T 25-04-2016 IPR003029 S1 domain GO:0003676 APQ13_RS05535 fadaa07ffacb60a5b5120ab5be550c1e 128 PANTHER PTHR10724 1 78 1.3E-27 T 25-04-2016 APQ13_RS07250 075b838db4f90e422e99cee5702a00bf 519 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 350 5.3E-59 T 25-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal APQ13_RS07250 075b838db4f90e422e99cee5702a00bf 519 SUPERFAMILY SSF75005 31 346 1.29E-47 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APQ13_RS07250 075b838db4f90e422e99cee5702a00bf 519 Gene3D G3DSA:2.120.10.10 50 281 1.7E-6 T 25-04-2016 IPR011040 Sialidases APQ13_RS07250 075b838db4f90e422e99cee5702a00bf 519 SMART SM00640 37 484 1.9E-65 T 25-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 APQ13_RS07250 075b838db4f90e422e99cee5702a00bf 519 PANTHER PTHR30175:SF0 31 478 3.1E-33 T 25-04-2016 APQ13_RS07250 075b838db4f90e422e99cee5702a00bf 519 PANTHER PTHR30175 31 478 3.1E-33 T 25-04-2016 APQ13_RS05200 bceb3c057bc2c5e57f9bc8af8633817c 191 PANTHER PTHR35798 10 191 4.9E-22 T 25-04-2016 APQ13_RS05200 bceb3c057bc2c5e57f9bc8af8633817c 191 Hamap MF_01197 Cell division protein SepF [sepF]. 4 176 18.85 T 25-04-2016 IPR023052 Cell division protein SepF GO:0090529 APQ13_RS05200 bceb3c057bc2c5e57f9bc8af8633817c 191 Pfam PF04472 Protein of unknown function (DUF552) 102 166 2.3E-16 T 25-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 APQ13_RS05200 bceb3c057bc2c5e57f9bc8af8633817c 191 PANTHER PTHR35798:SF1 10 191 4.9E-22 T 25-04-2016 APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 SUPERFAMILY SSF51998 137 703 4.27E-194 T 25-04-2016 APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 Gene3D G3DSA:3.20.70.20 139 702 6.3E-184 T 25-04-2016 APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 PANTHER PTHR21075 7 727 2.2E-269 T 25-04-2016 APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 Pfam PF03477 ATP cone domain 16 106 4.5E-19 T 25-04-2016 IPR005144 ATP-cone domain APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 ProSitePatterns PS00850 Glycine radical domain signature. 692 700 - T 25-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 132 721 1.8E-180 T 25-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APQ13_RS08080 a3c187312de52641bb9f2f44be4c18a1 734 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 131 721 2.8E-179 T 25-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APQ13_RS03520 fb706b7bdcb0fec8764ed44995ec7554 224 SUPERFAMILY SSF161098 14 209 4.32E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03520 fb706b7bdcb0fec8764ed44995ec7554 224 Gene3D G3DSA:1.10.3720.10 14 223 1.8E-32 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03520 fb706b7bdcb0fec8764ed44995ec7554 224 PANTHER PTHR30614 1 224 1.7E-55 T 25-04-2016 APQ13_RS03520 fb706b7bdcb0fec8764ed44995ec7554 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 223 5.0E-11 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 Gene3D G3DSA:3.40.50.300 538 656 3.7E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 SMART SM00487 248 470 9.2E-8 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 201 3.5E-36 T 25-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 SUPERFAMILY SSF52540 215 479 2.85E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 PANTHER PTHR30195:SF15 413 961 1.9E-207 T 25-04-2016 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 PANTHER PTHR30195:SF15 29 391 1.9E-207 T 25-04-2016 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 Pfam PF04851 Type III restriction enzyme, res subunit 255 435 1.1E-17 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 PANTHER PTHR30195 413 961 1.9E-207 T 25-04-2016 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 PANTHER PTHR30195 29 391 1.9E-207 T 25-04-2016 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 683 6.3E-177 T 25-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 Gene3D G3DSA:3.40.50.300 253 448 1.3E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 SUPERFAMILY SSF52540 512 690 2.66E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 SUPERFAMILY SSF52540 372 431 2.66E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02085 80ecf1fde3871d8d59566d5f006967f6 1034 Pfam PF11867 Domain of unknown function (DUF3387) 692 1010 8.7E-94 T 25-04-2016 IPR021810 Protein of unknown function DUF3387 APQ13_RS00600 67ca0eb5a0be6663b340d34bedfaa814 104 PIRSF PIRSF000699 1 104 3.1E-37 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS00600 67ca0eb5a0be6663b340d34bedfaa814 104 SUPERFAMILY SSF46973 1 102 7.59E-35 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS00600 67ca0eb5a0be6663b340d34bedfaa814 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 101 3.0E-34 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS00600 67ca0eb5a0be6663b340d34bedfaa814 104 PANTHER PTHR34382 1 103 1.2E-35 T 25-04-2016 APQ13_RS00600 67ca0eb5a0be6663b340d34bedfaa814 104 Gene3D G3DSA:1.20.58.80 2 103 1.3E-36 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PANTHER PTHR21087:SF0 4 157 9.0E-46 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 22.659 T 25-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 Pfam PF01202 Shikimate kinase 9 157 1.2E-42 T 25-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PRINTS PR01100 Shikimate kinase family signature 68 77 1.53E-22 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PRINTS PR01100 Shikimate kinase family signature 89 106 1.53E-22 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PRINTS PR01100 Shikimate kinase family signature 51 59 1.53E-22 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PRINTS PR01100 Shikimate kinase family signature 23 36 1.53E-22 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PRINTS PR01100 Shikimate kinase family signature 3 18 1.53E-22 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 PANTHER PTHR21087 4 157 9.0E-46 T 25-04-2016 APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 Gene3D G3DSA:3.40.50.300 4 158 1.2E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS04175 f1de7db14e50892b3b3e2668075ea857 158 SUPERFAMILY SSF52540 3 157 2.59E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08855 024b3b41810601ae159b8729bf587921 181 PANTHER PTHR37815:SF2 1 181 1.2E-74 T 25-04-2016 APQ13_RS08855 024b3b41810601ae159b8729bf587921 181 PANTHER PTHR37815 1 181 1.2E-74 T 25-04-2016 APQ13_RS08855 024b3b41810601ae159b8729bf587921 181 Hamap MF_01572 UPF0397 protein . 2 181 27.795 T 25-04-2016 IPR022914 Protein of unknown function UPF0397 APQ13_RS08855 024b3b41810601ae159b8729bf587921 181 Pfam PF07155 ECF-type riboflavin transporter, S component 3 170 2.4E-54 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 PANTHER PTHR35800 170 322 2.1E-51 T 25-04-2016 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 PANTHER PTHR35800 1 54 2.1E-51 T 25-04-2016 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 Gene3D G3DSA:3.30.300.120 176 250 7.0E-21 T 25-04-2016 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 Gene3D G3DSA:3.30.30.80 1 51 1.9E-17 T 25-04-2016 IPR032782 Jag, N-terminal APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 Gene3D G3DSA:3.30.1370.50 252 320 8.4E-25 T 25-04-2016 IPR001374 R3H domain GO:0003676 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 SMART SM00393 241 320 1.7E-11 T 25-04-2016 IPR001374 R3H domain GO:0003676 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 Pfam PF14804 Jag N-terminus 4 51 1.1E-17 T 25-04-2016 IPR032782 Jag, N-terminal APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 SUPERFAMILY SSF82708 261 318 5.3E-10 T 25-04-2016 IPR001374 R3H domain GO:0003676 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 Pfam PF13083 KH domain 177 247 1.6E-15 T 25-04-2016 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 Pfam PF01424 R3H domain 260 317 8.3E-14 T 25-04-2016 IPR001374 R3H domain GO:0003676 APQ13_RS06220 b1707cbcc38cc55e2084743cd11f5c41 322 SMART SM01245 3 54 6.8E-20 T 25-04-2016 IPR032782 Jag, N-terminal APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 53 190 2.9E-17 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 PRINTS PR01002 Flagellar protein FlgJ signature 42 65 2.6E-7 T 25-04-2016 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 PRINTS PR01002 Flagellar protein FlgJ signature 151 170 2.6E-7 T 25-04-2016 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 PRINTS PR01002 Flagellar protein FlgJ signature 66 84 2.6E-7 T 25-04-2016 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 2.6E-7 T 25-04-2016 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 PANTHER PTHR33308 46 195 7.6E-23 T 25-04-2016 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 SMART SM00047 37 194 1.1E-51 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APQ13_RS07260 a87fd3a596073cee43a11768a3bfe9eb 195 PANTHER PTHR33308:SF3 46 195 7.6E-23 T 25-04-2016 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 Gene3D G3DSA:3.20.20.70 14 252 6.5E-81 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 PANTHER PTHR11082:SF25 1 324 1.6E-127 T 25-04-2016 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 Pfam PF01207 Dihydrouridine synthase (Dus) 20 317 1.5E-85 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 10 323 8.0E-102 T 25-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 PANTHER PTHR11082 1 324 1.6E-127 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 Gene3D G3DSA:1.10.1200.80 261 323 9.1E-19 T 25-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 SUPERFAMILY SSF51395 17 322 7.87E-85 T 25-04-2016 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 25-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APQ13_RS06855 0bb15b6dc6cc32cd91a0c768c57e2b52 325 PIRSF PIRSF006621 7 325 2.0E-99 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 SUPERFAMILY SSF52313 6 231 3.01E-97 T 25-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PANTHER PTHR12534 1 237 1.1E-122 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 Pfam PF00318 Ribosomal protein S2 9 224 6.1E-98 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.332 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 Gene3D G3DSA:3.40.50.10490 158 239 3.1E-69 T 25-04-2016 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 Gene3D G3DSA:3.40.50.10490 23 99 3.1E-69 T 25-04-2016 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 25-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.7E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.7E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.7E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.7E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.7E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.7E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 Gene3D G3DSA:1.10.287.610 100 152 2.6E-25 T 25-04-2016 APQ13_RS08365 176df4eaab90e0e51619afeba44bb6bd 261 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.6E-106 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 SUPERFAMILY SSF50249 1 164 8.23E-54 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 PIRSF PIRSF002070 1 151 2.2E-36 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.702 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 Pfam PF00436 Single-strand binding protein family 2 103 6.1E-36 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 PANTHER PTHR10302 1 164 4.1E-44 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 Gene3D G3DSA:2.40.50.140 1 164 4.1E-46 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS09120 06c57825d3230b5b2e2a0bacff544095 164 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 164 3.0E-48 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS07320 e56ff0cb6200f9f854aadacc32ac6629 304 SMART SM00530 8 64 3.6E-5 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS07320 e56ff0cb6200f9f854aadacc32ac6629 304 SUPERFAMILY SSF47413 2 71 7.41E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS07320 e56ff0cb6200f9f854aadacc32ac6629 304 Pfam PF12844 Helix-turn-helix domain 6 69 1.3E-7 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS07320 e56ff0cb6200f9f854aadacc32ac6629 304 Gene3D G3DSA:1.10.260.40 5 100 1.8E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 PANTHER PTHR11851:SF134 14 412 3.1E-57 T 25-04-2016 APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 Pfam PF05193 Peptidase M16 inactive domain 185 366 2.3E-9 T 25-04-2016 IPR007863 Peptidase M16, C-terminal APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 SUPERFAMILY SSF63411 11 234 6.46E-36 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 Pfam PF00675 Insulinase (Peptidase family M16) 62 176 4.7E-18 T 25-04-2016 IPR011765 Peptidase M16, N-terminal APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 SUPERFAMILY SSF63411 279 416 2.2E-9 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 Gene3D G3DSA:3.30.830.10 10 233 7.7E-37 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 Gene3D G3DSA:3.30.830.10 318 419 3.7E-4 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APQ13_RS07735 cb0f2167489ae43d3595158091cac0dd 430 PANTHER PTHR11851 14 412 3.1E-57 T 25-04-2016 APQ13_RS00265 9beb8ab7862b3546e919c1c2eeafe9a4 146 Gene3D G3DSA:1.20.1500.10 9 126 1.7E-20 T 25-04-2016 IPR023378 YheA/YmcA-like domain APQ13_RS00265 9beb8ab7862b3546e919c1c2eeafe9a4 146 PANTHER PTHR38448:SF2 4 127 1.3E-23 T 25-04-2016 APQ13_RS00265 9beb8ab7862b3546e919c1c2eeafe9a4 146 PANTHER PTHR38448 4 127 1.3E-23 T 25-04-2016 APQ13_RS00265 9beb8ab7862b3546e919c1c2eeafe9a4 146 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 11 117 5.7E-16 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA APQ13_RS00265 9beb8ab7862b3546e919c1c2eeafe9a4 146 SUPERFAMILY SSF158622 7 127 4.06E-24 T 25-04-2016 IPR023378 YheA/YmcA-like domain APQ13_RS01245 c09fd0484c09a9be6fe4735100440e88 465 ProSitePatterns PS00218 Amino acid permeases signature. 53 83 - T 25-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APQ13_RS01245 c09fd0484c09a9be6fe4735100440e88 465 PIRSF PIRSF006060 1 465 3.1E-56 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS01245 c09fd0484c09a9be6fe4735100440e88 465 Pfam PF00324 Amino acid permease 28 449 1.9E-85 T 25-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APQ13_RS01245 c09fd0484c09a9be6fe4735100440e88 465 PANTHER PTHR11785 17 465 3.5E-125 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS01245 c09fd0484c09a9be6fe4735100440e88 465 PANTHER PTHR11785:SF29 17 465 3.5E-125 T 25-04-2016 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 25-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 PIRSF PIRSF006060 1 458 2.0E-74 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 PANTHER PTHR11785 1 177 6.9E-219 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 PANTHER PTHR11785 193 457 6.9E-219 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 PANTHER PTHR11785:SF399 1 177 6.9E-219 T 25-04-2016 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 PANTHER PTHR11785:SF399 193 457 6.9E-219 T 25-04-2016 APQ13_RS03445 e8a9acdb73ad6a8d6d3598e41fedecc6 458 Pfam PF00324 Amino acid permease 20 456 4.8E-104 T 25-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APQ13_RS03765 13e91fc68586a4d5b00d253875246992 144 Pfam PF13333 Integrase core domain 87 142 2.2E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APQ13_RS03765 13e91fc68586a4d5b00d253875246992 144 PANTHER PTHR32552 3 138 2.3E-17 T 25-04-2016 APQ13_RS03765 13e91fc68586a4d5b00d253875246992 144 SUPERFAMILY SSF53098 3 136 4.68E-21 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS03765 13e91fc68586a4d5b00d253875246992 144 Gene3D G3DSA:3.30.420.10 3 135 2.5E-15 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS06270 761aef23e6080359840edc3780a9fcc8 164 PANTHER PTHR11002:SF9 1 164 2.8E-56 T 25-04-2016 APQ13_RS06270 761aef23e6080359840edc3780a9fcc8 164 Gene3D G3DSA:3.40.1050.10 3 163 9.6E-40 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APQ13_RS06270 761aef23e6080359840edc3780a9fcc8 164 SUPERFAMILY SSF53056 4 163 2.75E-41 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APQ13_RS06270 761aef23e6080359840edc3780a9fcc8 164 PANTHER PTHR11002 1 164 2.8E-56 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APQ13_RS06270 761aef23e6080359840edc3780a9fcc8 164 SMART SM00947 24 164 3.2E-34 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APQ13_RS06270 761aef23e6080359840edc3780a9fcc8 164 Pfam PF00484 Carbonic anhydrase 32 159 1.2E-13 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APQ13_RS03470 12e8b444b82a8c5e4c6c9ecaaea7dc78 259 Pfam PF04973 Nicotinamide mononucleotide transporter 66 249 9.0E-41 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APQ13_RS03470 12e8b444b82a8c5e4c6c9ecaaea7dc78 259 PANTHER PTHR36122:SF2 44 259 1.4E-52 T 25-04-2016 APQ13_RS03470 12e8b444b82a8c5e4c6c9ecaaea7dc78 259 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 68 250 2.1E-48 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APQ13_RS03470 12e8b444b82a8c5e4c6c9ecaaea7dc78 259 PANTHER PTHR36122 44 259 1.4E-52 T 25-04-2016 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 240 107.39 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 PANTHER PTHR32125:SF1 1 222 2.5E-113 T 25-04-2016 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 PIRSF PIRSF000386 1 240 4.8E-99 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 PANTHER PTHR32125 1 222 2.5E-113 T 25-04-2016 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 Gene3D G3DSA:3.40.1280.10 1 154 7.6E-60 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 SUPERFAMILY SSF75217 1 237 2.52E-94 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 Gene3D G3DSA:1.10.1270.20 155 237 4.8E-37 T 25-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 215 4.9E-65 T 25-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APQ13_RS03800 7f8416f52d527ba200084eee4b4106d9 240 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 1.4E-92 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APQ13_RS09505 a3818864694dc0ddbf62d820fa8fc0a1 84 Gene3D G3DSA:1.20.58.90 1 84 4.1E-49 T 25-04-2016 APQ13_RS09505 a3818864694dc0ddbf62d820fa8fc0a1 84 SUPERFAMILY SSF140121 1 77 2.09E-42 T 25-04-2016 APQ13_RS09505 a3818864694dc0ddbf62d820fa8fc0a1 84 Pfam PF08930 Domain of unknown function (DUF1912) 1 84 6.1E-50 T 25-04-2016 IPR015026 Protein of unknown function DUF1912 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 4 26 3.5E-8 T 25-04-2016 IPR022263 KxYKxGKxW signal peptide APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 SUPERFAMILY SSF69360 154 337 1.02E-25 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Pfam PF01473 Putative cell wall binding repeat 180 197 0.44 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Pfam PF01473 Putative cell wall binding repeat 515 530 0.026 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Pfam PF01473 Putative cell wall binding repeat 160 177 0.26 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Pfam PF01473 Putative cell wall binding repeat 276 292 3.9E-4 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Pfam PF01473 Putative cell wall binding repeat 360 377 0.68 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Pfam PF01473 Putative cell wall binding repeat 437 452 0.021 T 25-04-2016 IPR018337 Cell wall/choline-binding repeat APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 349 409 2.3E-20 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 504 561 2.0E-16 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 264 333 3.1E-16 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 169 213 4.7E-15 T 25-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.20.120.10 484 515 2.6E-10 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.20.120.10 327 361 5.7E-5 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.20.120.10 238 275 6.5E-8 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.10.270.10 276 326 2.1E-8 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 SUPERFAMILY SSF69360 314 555 1.01E-31 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.10.270.10 151 237 6.4E-16 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.10.270.10 428 483 1.6E-8 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.10.270.10 362 427 1.2E-12 T 25-04-2016 APQ13_RS07905 8b81b75fd602f3793b71c1cab7e1afd4 563 Gene3D G3DSA:2.10.270.10 516 561 3.8E-11 T 25-04-2016 APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 Gene3D G3DSA:3.40.190.10 17 132 2.7E-36 T 25-04-2016 APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 Gene3D G3DSA:3.40.190.10 133 210 1.0E-6 T 25-04-2016 APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 SMART SM00062 31 258 4.2E-42 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 256 1.2E-44 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 SUPERFAMILY SSF53850 28 259 2.08E-46 T 25-04-2016 APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 PANTHER PTHR18966:SF208 25 256 5.3E-21 T 25-04-2016 APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 PANTHER PTHR18966 25 256 5.3E-21 T 25-04-2016 APQ13_RS08820 b495b5985fd30e2b6f1f8ccbacc0ec07 267 Gene3D G3DSA:1.10.10.10 224 265 0.001 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS04545 94fb2a4560f10374f38f7a363ca886c6 122 PANTHER PTHR31503 1 119 6.0E-24 T 25-04-2016 APQ13_RS04545 94fb2a4560f10374f38f7a363ca886c6 122 PIRSF PIRSF028777 1 122 9.1E-46 T 25-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 APQ13_RS04545 94fb2a4560f10374f38f7a363ca886c6 122 Pfam PF03733 Inner membrane component domain 4 54 3.2E-16 T 25-04-2016 IPR005185 Inner membrane component domain APQ13_RS04545 94fb2a4560f10374f38f7a363ca886c6 122 Pfam PF03733 Inner membrane component domain 66 115 1.5E-16 T 25-04-2016 IPR005185 Inner membrane component domain APQ13_RS04545 94fb2a4560f10374f38f7a363ca886c6 122 PANTHER PTHR31503:SF17 1 119 6.0E-24 T 25-04-2016 APQ13_RS08110 b3cad3ec72be010dae64f9d004422b74 319 Pfam PF00535 Glycosyl transferase family 2 4 169 3.3E-33 T 25-04-2016 IPR001173 Glycosyltransferase 2-like APQ13_RS08110 b3cad3ec72be010dae64f9d004422b74 319 PANTHER PTHR10859:SF81 1 316 1.3E-139 T 25-04-2016 APQ13_RS08110 b3cad3ec72be010dae64f9d004422b74 319 SUPERFAMILY SSF53448 1 253 1.63E-37 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS08110 b3cad3ec72be010dae64f9d004422b74 319 Gene3D G3DSA:3.90.550.10 1 168 4.5E-27 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS08110 b3cad3ec72be010dae64f9d004422b74 319 PANTHER PTHR10859 1 316 1.3E-139 T 25-04-2016 APQ13_RS08875 ef7af204f31f226879697ce33088a634 186 Gene3D G3DSA:1.20.1440.20 12 182 2.2E-68 T 25-04-2016 IPR023353 LemA-like domain APQ13_RS08875 ef7af204f31f226879697ce33088a634 186 SUPERFAMILY SSF140478 24 172 1.57E-56 T 25-04-2016 IPR023353 LemA-like domain APQ13_RS08875 ef7af204f31f226879697ce33088a634 186 PANTHER PTHR34478:SF2 1 185 1.7E-90 T 25-04-2016 APQ13_RS08875 ef7af204f31f226879697ce33088a634 186 PANTHER PTHR34478 1 185 1.7E-90 T 25-04-2016 APQ13_RS08875 ef7af204f31f226879697ce33088a634 186 Pfam PF04011 LemA family 5 182 3.8E-72 T 25-04-2016 IPR007156 LemA APQ13_RS00530 6da63645ac5b8f86f220ca31bbd69225 174 Gene3D G3DSA:1.20.120.450 1 171 9.3E-59 T 25-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase APQ13_RS00530 6da63645ac5b8f86f220ca31bbd69225 174 SUPERFAMILY SSF109854 1 171 8.61E-21 T 25-04-2016 APQ13_RS00530 6da63645ac5b8f86f220ca31bbd69225 174 Pfam PF04978 Protein of unknown function (DUF664) 7 169 9.9E-9 T 25-04-2016 IPR007061 Protein of unknown function DUF664 APQ13_RS06055 5eeb1c723b816e4318750297fe251111 281 PANTHER PTHR24220:SF428 7 273 4.5E-104 T 25-04-2016 APQ13_RS06055 5eeb1c723b816e4318750297fe251111 281 SUPERFAMILY SSF52540 3 225 3.06E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06055 5eeb1c723b816e4318750297fe251111 281 Gene3D G3DSA:3.40.50.300 2 231 8.8E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06055 5eeb1c723b816e4318750297fe251111 281 Pfam PF00005 ABC transporter 21 161 1.5E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS06055 5eeb1c723b816e4318750297fe251111 281 SMART SM00382 30 208 3.7E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS06055 5eeb1c723b816e4318750297fe251111 281 PANTHER PTHR24220 7 273 4.5E-104 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 SUPERFAMILY SSF56784 332 352 3.56E-55 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 SUPERFAMILY SSF56784 421 631 3.56E-55 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 SUPERFAMILY SSF81653 142 233 1.18E-23 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Gene3D G3DSA:2.70.150.10 8 32 5.9E-28 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Gene3D G3DSA:2.70.150.10 127 234 5.9E-28 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Gene3D G3DSA:3.40.1110.10 350 457 6.0E-11 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Pfam PF00702 haloacid dehalogenase-like hydrolase 330 545 1.2E-34 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 550 2.9E-30 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 2.9E-30 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 183 197 2.9E-30 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 478 488 2.9E-30 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 566 2.9E-30 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 456 467 2.9E-30 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 SUPERFAMILY SSF81665 234 334 6.8E-10 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 SUPERFAMILY SSF81665 82 136 6.8E-10 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Gene3D G3DSA:3.40.50.1000 307 349 1.9E-46 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Gene3D G3DSA:3.40.50.1000 458 596 1.9E-46 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 105 611 7.8E-83 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 531 547 1.2E-6 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 562 587 1.2E-6 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 503 519 1.2E-6 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PANTHER PTHR24093 48 606 2.9E-168 T 25-04-2016 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 Pfam PF00122 E1-E2 ATPase 103 321 1.6E-54 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 83 633 2.8E-165 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APQ13_RS08240 9c4768d0f694ff34ff469fb7b9175eaa 638 PANTHER PTHR24093:SF317 48 606 2.9E-168 T 25-04-2016 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Gene3D G3DSA:3.60.20.10 2 239 7.3E-67 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Pfam PF01380 SIS domain 290 413 2.0E-26 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Pfam PF01380 SIS domain 460 553 9.3E-16 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Pfam PF13522 Glutamine amidotransferase domain 64 189 2.0E-19 T 25-04-2016 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 604 3.9E-208 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 PANTHER PTHR10937 1 604 1.4E-268 T 25-04-2016 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Gene3D G3DSA:3.40.50.10490 445 604 6.4E-55 T 25-04-2016 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Gene3D G3DSA:3.40.50.10490 243 444 2.0E-50 T 25-04-2016 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 SUPERFAMILY SSF56235 2 235 1.12E-65 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 SUPERFAMILY SSF53697 246 604 7.67E-88 T 25-04-2016 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 PANTHER PTHR10937:SF0 1 604 1.4E-268 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APQ13_RS02420 eac70f8bb63a390e60ce5ec9dce45d3f 604 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 604 37.879 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF08481 GBS Bsp-like repeat 448 537 3.7E-31 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF08481 GBS Bsp-like repeat 344 432 1.8E-31 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF08481 GBS Bsp-like repeat 552 641 3.6E-30 T 25-04-2016 IPR013688 GBS Bsp-like APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF04650 YSIRK type signal peptide 11 33 5.4E-10 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF08460 Bacterial SH3 domain 264 326 2.5E-25 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF08460 Bacterial SH3 domain 184 247 3.5E-28 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 Pfam PF08460 Bacterial SH3 domain 653 714 5.6E-25 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 SMART SM00287 654 712 9.7E-11 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 SMART SM00287 267 333 3.4E-9 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 SMART SM00287 187 253 6.1E-13 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type APQ13_RS04960 21561c582b5bb075fec6de75b517ae03 715 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 43 6.8E-15 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 SMART SM00422 24 91 6.8E-9 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 PANTHER PTHR30204 14 82 8.7E-13 T 25-04-2016 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 SUPERFAMILY SSF46955 23 108 1.33E-15 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 34 47 9.9E-5 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 58 78 9.9E-5 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 34 9.9E-5 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 Pfam PF13411 MerR HTH family regulatory protein 24 83 8.5E-17 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS01915 dbeb99e2e8da05986228f07a07c38a52 116 Gene3D G3DSA:1.10.1660.10 22 83 8.4E-17 T 25-04-2016 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 PANTHER PTHR30146 1 335 2.2E-87 T 25-04-2016 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 PANTHER PTHR30146:SF30 1 335 2.2E-87 T 25-04-2016 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 Pfam PF13377 Periplasmic binding protein-like domain 175 333 1.3E-26 T 25-04-2016 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 SMART SM00354 1 71 5.8E-30 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 Gene3D G3DSA:3.40.50.2300 51 179 9.2E-31 T 25-04-2016 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 Gene3D G3DSA:1.10.260.40 1 50 1.1E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-19 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 SUPERFAMILY SSF53822 62 335 1.99E-50 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 SUPERFAMILY SSF47413 1 59 1.22E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS00745 79f322e961b959f9cd013961b8168531 339 Gene3D G3DSA:3.40.50.2300 180 313 1.7E-28 T 25-04-2016 APQ13_RS08795 148e79f4bfa17212754b62f1ee153ac5 58 Gene3D G3DSA:1.20.5.1030 1 52 2.0E-12 T 25-04-2016 APQ13_RS08795 148e79f4bfa17212754b62f1ee153ac5 58 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 2 50 4.2E-12 T 25-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APQ13_RS08795 148e79f4bfa17212754b62f1ee153ac5 58 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 2 49 6.6E-10 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APQ13_RS06670 96ac0c83bdccbb7f8a35f8e58eef2730 633 Pfam PF09972 Predicted membrane protein (DUF2207) 29 564 4.1E-72 T 25-04-2016 IPR018702 Protein of unknown function DUF2207, membrane APQ13_RS01445 4430c8cd8d43a3e4336cc3d420858a6e 114 Pfam PF09827 CRISPR associated protein Cas2 6 85 5.9E-17 T 25-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 APQ13_RS01445 4430c8cd8d43a3e4336cc3d420858a6e 114 SUPERFAMILY SSF143430 5 88 9.94E-16 T 25-04-2016 APQ13_RS01445 4430c8cd8d43a3e4336cc3d420858a6e 114 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 6 104 3.4E-31 T 25-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 APQ13_RS01445 4430c8cd8d43a3e4336cc3d420858a6e 114 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 6 104 13.524 T 25-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 Pfam PF13483 Beta-lactamase superfamily domain 42 290 1.2E-13 T 25-04-2016 APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 PANTHER PTHR15032:SF13 94 363 2.5E-131 T 25-04-2016 APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 PANTHER PTHR15032:SF13 1 77 2.5E-131 T 25-04-2016 APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 Gene3D G3DSA:3.60.15.10 1 345 7.8E-122 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 SUPERFAMILY SSF56281 218 327 2.1E-25 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 SUPERFAMILY SSF56281 165 189 2.1E-25 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 SUPERFAMILY SSF56281 100 134 2.1E-25 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 SUPERFAMILY SSF56281 40 63 2.1E-25 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 PANTHER PTHR15032 94 363 2.5E-131 T 25-04-2016 APQ13_RS06455 2dd99153a68b3978ad94eb0ffb3c7d0c 363 PANTHER PTHR15032 1 77 2.5E-131 T 25-04-2016 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 Pfam PF04914 DltD C-terminal region 264 391 2.2E-52 T 25-04-2016 IPR006998 DltD, C-terminal UniPathway: UPA00556 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 Pfam PF04918 DltD central region 100 262 8.6E-53 T 25-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 PIRSF PIRSF021438 1 393 9.3E-130 T 25-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 PANTHER PTHR40039:SF1 2 421 2.7E-122 T 25-04-2016 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 9 390 1.1E-141 T 25-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 Pfam PF04915 DltD N-terminal region 38 99 1.2E-25 T 25-04-2016 IPR006999 DltD, N-terminal UniPathway: UPA00556 APQ13_RS00190 f2d347f9b328a73becf3e19db129af4a 421 PANTHER PTHR40039 2 421 2.7E-122 T 25-04-2016 APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 PANTHER PTHR10108:SF868 47 178 1.6E-24 T 25-04-2016 APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 PANTHER PTHR10108:SF868 216 235 1.6E-24 T 25-04-2016 APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 SUPERFAMILY SSF53335 41 249 6.5E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 Gene3D G3DSA:3.40.50.150 36 235 7.4E-24 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 Pfam PF13649 Methyltransferase domain 56 151 9.2E-12 T 25-04-2016 APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 PANTHER PTHR10108 47 178 1.6E-24 T 25-04-2016 APQ13_RS00545 dedeb6ffa944da352519e7ab28c9e95f 278 PANTHER PTHR10108 216 235 1.6E-24 T 25-04-2016 APQ13_RS00315 5b0196138da78862cdd08b05eec722ac 268 Pfam PF04468 PSP1 C-terminal conserved region 63 147 3.8E-21 T 25-04-2016 IPR007557 PSP1, C-terminal APQ13_RS00315 5b0196138da78862cdd08b05eec722ac 268 PANTHER PTHR21600:SF3 53 260 7.5E-39 T 25-04-2016 APQ13_RS00315 5b0196138da78862cdd08b05eec722ac 268 PANTHER PTHR21600 53 260 7.5E-39 T 25-04-2016 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 Gene3D G3DSA:2.30.22.10 129 178 6.3E-21 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 Gene3D G3DSA:3.90.20.20 30 122 6.6E-22 T 25-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 PANTHER PTHR21237 12 177 4.8E-45 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 SUPERFAMILY SSF51064 131 178 5.1E-14 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 ProSitePatterns PS01071 grpE protein signature. 133 177 - T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 Hamap MF_01151 Protein GrpE [grpE]. 4 179 19.169 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 Pfam PF01025 GrpE 20 178 2.0E-43 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 SUPERFAMILY SSF58014 34 124 6.41E-21 T 25-04-2016 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 PRINTS PR00773 GrpE protein signature 130 145 1.6E-25 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 PRINTS PR00773 GrpE protein signature 158 177 1.6E-25 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 PRINTS PR00773 GrpE protein signature 53 69 1.6E-25 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS07240 01dbea7de281a375376c42d113fd84b6 179 PRINTS PR00773 GrpE protein signature 81 96 1.6E-25 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 Pfam PF03193 Protein of unknown function, DUF258 58 215 1.8E-57 T 25-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 Gene3D G3DSA:3.40.50.300 62 214 3.5E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 SUPERFAMILY SSF50249 2 62 1.88E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 PANTHER PTHR32120 2 290 8.8E-108 T 25-04-2016 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 SUPERFAMILY SSF52540 64 280 1.51E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 Gene3D G3DSA:1.10.40.50 219 288 2.4E-24 T 25-04-2016 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 273 5.2E-72 T 25-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 280 37.858 T 25-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 PANTHER PTHR32120:SF2 2 290 8.8E-108 T 25-04-2016 APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 Gene3D G3DSA:2.40.50.140 2 60 3.1E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS06150 4e430c58906a5831902bb211d0b80f55 290 Pfam PF16745 RsgA N-terminal domain 2 55 2.1E-23 T 25-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal APQ13_RS01390 ed43fd2b4110e2c84f21a6e929f6b2c9 242 SUPERFAMILY SSF54637 157 239 3.16E-21 T 25-04-2016 IPR029069 HotDog domain APQ13_RS01390 ed43fd2b4110e2c84f21a6e929f6b2c9 242 Gene3D G3DSA:3.10.129.10 150 240 1.9E-23 T 25-04-2016 IPR029069 HotDog domain APQ13_RS01390 ed43fd2b4110e2c84f21a6e929f6b2c9 242 Gene3D G3DSA:3.10.129.10 1 144 1.6E-34 T 25-04-2016 IPR029069 HotDog domain APQ13_RS01390 ed43fd2b4110e2c84f21a6e929f6b2c9 242 SUPERFAMILY SSF54637 1 146 3.18E-40 T 25-04-2016 IPR029069 HotDog domain APQ13_RS01390 ed43fd2b4110e2c84f21a6e929f6b2c9 242 PANTHER PTHR31727 48 212 2.5E-37 T 25-04-2016 APQ13_RS01390 ed43fd2b4110e2c84f21a6e929f6b2c9 242 Pfam PF01643 Acyl-ACP thioesterase 2 241 1.0E-93 T 25-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 PANTHER PTHR17224:SF1 3 188 2.6E-79 T 25-04-2016 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 SUPERFAMILY SSF53178 2 188 4.71E-68 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 Gene3D G3DSA:3.40.50.1470 1 188 1.7E-72 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 1.4E-65 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 Pfam PF01195 Peptidyl-tRNA hydrolase 4 187 2.1E-59 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 37.51 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APQ13_RS07640 038e30c024bad25ab58b8f0c14412b18 189 PANTHER PTHR17224 3 188 2.6E-79 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APQ13_RS01630 b258b903eb1814fd1bd6b6bd110e97bd 84 Gene3D G3DSA:3.30.420.10 6 84 2.1E-13 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS01630 b258b903eb1814fd1bd6b6bd110e97bd 84 SUPERFAMILY SSF53098 3 84 1.25E-15 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS01630 b258b903eb1814fd1bd6b6bd110e97bd 84 PANTHER PTHR32552 12 84 9.2E-18 T 25-04-2016 APQ13_RS01630 b258b903eb1814fd1bd6b6bd110e97bd 84 Pfam PF00665 Integrase core domain 10 84 2.3E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APQ13_RS08180 a4fe92fb4541a9c6cb5f24299d684504 342 PANTHER PTHR23513 8 283 1.2E-47 T 25-04-2016 APQ13_RS08180 a4fe92fb4541a9c6cb5f24299d684504 342 Gene3D G3DSA:1.20.1250.20 7 92 2.3E-7 T 25-04-2016 APQ13_RS08180 a4fe92fb4541a9c6cb5f24299d684504 342 Gene3D G3DSA:1.20.1250.20 129 321 9.2E-13 T 25-04-2016 APQ13_RS08180 a4fe92fb4541a9c6cb5f24299d684504 342 PANTHER PTHR23513:SF4 8 283 1.2E-47 T 25-04-2016 APQ13_RS08180 a4fe92fb4541a9c6cb5f24299d684504 342 Pfam PF07690 Major Facilitator Superfamily 7 266 3.0E-20 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS08180 a4fe92fb4541a9c6cb5f24299d684504 342 SUPERFAMILY SSF103473 7 326 2.35E-29 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS06705 3654db47c22b1a7f04b6c092c63a6d7a 295 SUPERFAMILY SSF117892 56 186 4.32E-25 T 25-04-2016 IPR001107 Band 7 domain APQ13_RS06705 3654db47c22b1a7f04b6c092c63a6d7a 295 Pfam PF01145 SPFH domain / Band 7 family 24 196 2.1E-26 T 25-04-2016 IPR001107 Band 7 domain APQ13_RS06705 3654db47c22b1a7f04b6c092c63a6d7a 295 PANTHER PTHR10264 1 292 3.3E-138 T 25-04-2016 IPR001972 Stomatin family GO:0016020 APQ13_RS06705 3654db47c22b1a7f04b6c092c63a6d7a 295 PANTHER PTHR10264:SF84 1 292 3.3E-138 T 25-04-2016 APQ13_RS06705 3654db47c22b1a7f04b6c092c63a6d7a 295 SMART SM00244 20 180 1.5E-29 T 25-04-2016 IPR001107 Band 7 domain APQ13_RS04470 6f211b8b7e4d095bf0a32731d2d9cefe 434 SMART SM00471 49 181 2.9E-11 T 25-04-2016 IPR003607 HD/PDEase domain APQ13_RS04470 6f211b8b7e4d095bf0a32731d2d9cefe 434 Gene3D G3DSA:1.10.3210.10 2 253 1.3E-85 T 25-04-2016 IPR006674 HD domain APQ13_RS04470 6f211b8b7e4d095bf0a32731d2d9cefe 434 PANTHER PTHR11373 3 316 2.0E-91 T 25-04-2016 APQ13_RS04470 6f211b8b7e4d095bf0a32731d2d9cefe 434 Pfam PF01966 HD domain 53 174 1.6E-13 T 25-04-2016 IPR006674 HD domain APQ13_RS04470 6f211b8b7e4d095bf0a32731d2d9cefe 434 SUPERFAMILY SSF109604 2 430 6.11E-124 T 25-04-2016 APQ13_RS05145 50298fd582fec8c801b0c285c55d4c6c 228 Gene3D G3DSA:1.10.3720.10 11 222 2.5E-48 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS05145 50298fd582fec8c801b0c285c55d4c6c 228 SUPERFAMILY SSF161098 12 208 7.19E-42 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS05145 50298fd582fec8c801b0c285c55d4c6c 228 PANTHER PTHR30614:SF15 1 228 7.3E-88 T 25-04-2016 APQ13_RS05145 50298fd582fec8c801b0c285c55d4c6c 228 PANTHER PTHR30614 1 228 7.3E-88 T 25-04-2016 APQ13_RS05145 50298fd582fec8c801b0c285c55d4c6c 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 2.2E-19 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS05145 50298fd582fec8c801b0c285c55d4c6c 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 222 2.4E-24 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS01085 6d28a2ee5e820129e0a5bf820c15dcbf 244 Gene3D G3DSA:3.20.20.140 3 242 1.5E-14 T 25-04-2016 APQ13_RS01085 6d28a2ee5e820129e0a5bf820c15dcbf 244 SUPERFAMILY SSF89550 2 242 4.71E-24 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APQ13_RS01085 6d28a2ee5e820129e0a5bf820c15dcbf 244 PANTHER PTHR21039 1 240 9.5E-23 T 25-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 APQ13_RS01205 bccc30bec8a4444135cdf2496abfc08b 198 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 18 189 3.9E-39 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APQ13_RS01205 bccc30bec8a4444135cdf2496abfc08b 198 PANTHER PTHR21047 3 193 1.6E-41 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APQ13_RS01205 bccc30bec8a4444135cdf2496abfc08b 198 SUPERFAMILY SSF51182 18 193 1.19E-51 T 25-04-2016 IPR011051 RmlC-like cupin domain APQ13_RS01205 bccc30bec8a4444135cdf2496abfc08b 198 Gene3D G3DSA:2.60.120.10 17 193 2.3E-54 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS01205 bccc30bec8a4444135cdf2496abfc08b 198 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 18 196 2.0E-101 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 SUPERFAMILY SSF55811 4 134 1.62E-27 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 Gene3D G3DSA:3.90.79.10 3 157 7.1E-37 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PRINTS PR01402 Mutator MutX protein signature 4 22 8.4E-69 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PRINTS PR01402 Mutator MutX protein signature 138 158 8.4E-69 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PRINTS PR01402 Mutator MutX protein signature 68 94 8.4E-69 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PRINTS PR01402 Mutator MutX protein signature 121 138 8.4E-69 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PRINTS PR01402 Mutator MutX protein signature 22 37 8.4E-69 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PRINTS PR01402 Mutator MutX protein signature 101 121 8.4E-69 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PANTHER PTHR22769 3 147 5.6E-47 T 25-04-2016 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 Pfam PF00293 NUDIX domain 4 130 3.7E-23 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 PANTHER PTHR22769:SF39 3 147 5.6E-47 T 25-04-2016 APQ13_RS01220 41e5067d51f762441aee2f12001530c6 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APQ13_RS04320 6061806f9f3a7f6252200c5e2019acf4 131 Pfam PF06103 Bacterial protein of unknown function (DUF948) 4 91 9.2E-31 T 25-04-2016 IPR009293 Uncharacterised protein family UPF0478 APQ13_RS04320 6061806f9f3a7f6252200c5e2019acf4 131 PANTHER PTHR40070 1 127 4.0E-26 T 25-04-2016 APQ13_RS04320 6061806f9f3a7f6252200c5e2019acf4 131 PANTHER PTHR40070:SF1 1 127 4.0E-26 T 25-04-2016 APQ13_RS03815 1972a7da07bc0db31e65bdf1b9c7838a 91 Gene3D G3DSA:3.30.1320.10 2 84 1.8E-36 T 25-04-2016 IPR023803 Ribosomal protein S16 domain APQ13_RS03815 1972a7da07bc0db31e65bdf1b9c7838a 91 Pfam PF00886 Ribosomal protein S16 9 67 4.5E-26 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03815 1972a7da07bc0db31e65bdf1b9c7838a 91 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.526 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03815 1972a7da07bc0db31e65bdf1b9c7838a 91 PANTHER PTHR12919 2 83 2.2E-45 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS03815 1972a7da07bc0db31e65bdf1b9c7838a 91 SUPERFAMILY SSF54565 2 88 3.53E-35 T 25-04-2016 IPR023803 Ribosomal protein S16 domain APQ13_RS03815 1972a7da07bc0db31e65bdf1b9c7838a 91 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.2E-35 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS02120 c273b70456e6feed2ab6214cfed01f12 150 Gene3D G3DSA:3.30.1330.30 1 132 2.5E-37 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS02120 c273b70456e6feed2ab6214cfed01f12 150 SUPERFAMILY SSF160515 1 130 1.96E-33 T 25-04-2016 APQ13_RS02120 c273b70456e6feed2ab6214cfed01f12 150 Pfam PF07997 Protein of unknown function (DUF1694) 1 119 3.8E-32 T 25-04-2016 IPR012543 Protein of unknown function DUF1694 APQ13_RS02120 c273b70456e6feed2ab6214cfed01f12 150 PIRSF PIRSF034303 1 150 7.3E-48 T 25-04-2016 IPR012543 Protein of unknown function DUF1694 APQ13_RS01225 08d5f323a7e453361efcdfd3a187ec21 389 PANTHER PTHR21716 44 371 1.8E-79 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS01225 08d5f323a7e453361efcdfd3a187ec21 389 PANTHER PTHR21716 8 28 1.8E-79 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS01225 08d5f323a7e453361efcdfd3a187ec21 389 Pfam PF01594 Domain of unknown function DUF20 36 366 2.4E-72 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 PANTHER PTHR11732 2 315 6.0E-91 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 PRINTS PR00069 Aldo-keto reductase signature 109 127 4.0E-8 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 PRINTS PR00069 Aldo-keto reductase signature 140 157 4.0E-8 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 Pfam PF00248 Aldo/keto reductase family 16 314 3.3E-64 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 SUPERFAMILY SSF51430 4 315 6.94E-71 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS06010 8ea01fe1fe63a14cbf2bfb50790548d0 322 Gene3D G3DSA:3.20.20.100 5 315 3.2E-74 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain APQ13_RS06325 9ccd13b9483fbc3016aa86887f3666de 121 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 1 118 2.0E-63 T 25-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06325 9ccd13b9483fbc3016aa86887f3666de 121 PANTHER PTHR40398 2 119 9.8E-21 T 25-04-2016 APQ13_RS06325 9ccd13b9483fbc3016aa86887f3666de 121 SUPERFAMILY SSF141530 4 120 2.35E-34 T 25-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06325 9ccd13b9483fbc3016aa86887f3666de 121 Gene3D G3DSA:2.40.33.40 1 120 9.1E-39 T 25-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS06325 9ccd13b9483fbc3016aa86887f3666de 121 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 117 6.7E-35 T 25-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APQ13_RS00590 4371dac4f3db3d07e8c3c29bdcad014c 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 103 3.6E-17 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS00590 4371dac4f3db3d07e8c3c29bdcad014c 105 Gene3D G3DSA:3.40.50.270 3 89 6.2E-17 T 25-04-2016 APQ13_RS00590 4371dac4f3db3d07e8c3c29bdcad014c 105 PANTHER PTHR34581 3 87 1.3E-16 T 25-04-2016 APQ13_RS00590 4371dac4f3db3d07e8c3c29bdcad014c 105 SUPERFAMILY SSF52794 3 90 3.4E-17 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS03180 ade67660a23bdb3e11d3e2ee5d451522 317 PANTHER PTHR24423 111 311 2.6E-46 T 25-04-2016 APQ13_RS03180 ade67660a23bdb3e11d3e2ee5d451522 317 PANTHER PTHR24423:SF557 111 311 2.6E-46 T 25-04-2016 APQ13_RS03180 ade67660a23bdb3e11d3e2ee5d451522 317 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 213 314 1.2E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03180 ade67660a23bdb3e11d3e2ee5d451522 317 SUPERFAMILY SSF55874 159 314 6.02E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03180 ade67660a23bdb3e11d3e2ee5d451522 317 Gene3D G3DSA:3.30.565.10 145 314 2.4E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS03180 ade67660a23bdb3e11d3e2ee5d451522 317 SMART SM00387 212 317 8.9E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS04110 6457ac826c7a370d309e1e9bb41be3c7 42 Pfam PF13253 Protein of unknown function (DUF4044) 8 39 6.8E-16 T 25-04-2016 IPR025270 Protein of unknown function DUF4044 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 SUPERFAMILY SSF51905 1 214 3.11E-25 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 SUPERFAMILY SSF51905 305 362 3.11E-25 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 Gene3D G3DSA:3.30.9.10 202 304 8.6E-14 T 25-04-2016 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 PANTHER PTHR13847 4 363 2.0E-104 T 25-04-2016 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 Gene3D G3DSA:3.50.50.60 141 201 3.7E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 Gene3D G3DSA:3.50.50.60 305 361 3.7E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 Gene3D G3DSA:3.50.50.60 1 80 3.7E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 SUPERFAMILY SSF54373 214 304 1.2E-9 T 25-04-2016 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 PANTHER PTHR13847:SF211 4 363 2.0E-104 T 25-04-2016 APQ13_RS01195 a55c93e29e911ef0063a95aa82fc2d68 367 Pfam PF01266 FAD dependent oxidoreductase 3 342 3.7E-40 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APQ13_RS02945 19c8f040d3da05eba6451d74fd0922d3 175 Gene3D G3DSA:2.40.50.40 62 129 9.8E-13 T 25-04-2016 APQ13_RS02945 19c8f040d3da05eba6451d74fd0922d3 175 PANTHER PTHR37299 1 174 9.0E-13 T 25-04-2016 APQ13_RS02945 19c8f040d3da05eba6451d74fd0922d3 175 SMART SM00850 71 168 1.2E-19 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS02945 19c8f040d3da05eba6451d74fd0922d3 175 Pfam PF04397 LytTr DNA-binding domain 74 167 6.3E-21 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS02945 19c8f040d3da05eba6451d74fd0922d3 175 Gene3D G3DSA:2.20.25.10 145 167 1.8E-4 T 25-04-2016 APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 Gene3D G3DSA:1.10.600.10 2 262 2.7E-79 T 25-04-2016 IPR008949 Isoprenoid synthase domain APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 PANTHER PTHR12001 1 283 2.9E-88 T 25-04-2016 IPR017446 Polyprenyl synthetase-related APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 75 91 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 PANTHER PTHR12001:SF23 1 283 2.9E-88 T 25-04-2016 APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 Pfam PF00348 Polyprenyl synthetase 25 258 4.4E-51 T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 205 217 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APQ13_RS05080 1da1ad7cfd00257a1a797d9ce99d3aaf 289 SUPERFAMILY SSF48576 2 265 1.77E-76 T 25-04-2016 IPR008949 Isoprenoid synthase domain APQ13_RS06375 5d9d404b6193c1e7b9784b7a27e21a15 258 PANTHER PTHR12553 1 247 3.2E-38 T 25-04-2016 APQ13_RS06375 5d9d404b6193c1e7b9784b7a27e21a15 258 Gene3D G3DSA:3.60.15.10 1 236 5.8E-47 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06375 5d9d404b6193c1e7b9784b7a27e21a15 258 SUPERFAMILY SSF56281 1 235 3.01E-47 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06375 5d9d404b6193c1e7b9784b7a27e21a15 258 Pfam PF12706 Beta-lactamase superfamily domain 32 214 2.2E-20 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS06375 5d9d404b6193c1e7b9784b7a27e21a15 258 SMART SM00849 18 213 2.9E-11 T 25-04-2016 IPR001279 Metallo-beta-lactamase APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Pfam PF13604 AAA domain 331 526 1.4E-45 T 25-04-2016 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 SUPERFAMILY SSF52540 552 731 4.49E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 PANTHER PTHR10887:SF284 659 714 3.1E-110 T 25-04-2016 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 PANTHER PTHR10887:SF284 287 587 3.1E-110 T 25-04-2016 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 2 776 28.105 T 25-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Gene3D G3DSA:3.40.50.300 651 719 4.0E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Gene3D G3DSA:3.40.50.300 510 582 4.0E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Pfam PF14490 Helix-hairpin-helix containing domain 147 236 5.3E-28 T 25-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 SUPERFAMILY SSF52540 185 495 1.97E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 SMART SM00382 344 495 1.0E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 PANTHER PTHR10887 659 714 3.1E-110 T 25-04-2016 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 PANTHER PTHR10887 287 587 3.1E-110 T 25-04-2016 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Pfam PF13538 UvrD-like helicase C-terminal domain 659 705 2.9E-16 T 25-04-2016 IPR027785 UvrD-like helicase C-terminal domain APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 SUPERFAMILY SSF52540 447 513 4.49E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 5 731 8.6E-280 T 25-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 APQ13_RS09060 60ca1a1a087495940d67928c3326f427 787 Gene3D G3DSA:3.40.50.300 290 509 2.2E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02070 37cd479a4562d5c67eb691875ab5c55d 191 SUPERFAMILY SSF116734 19 188 4.41E-21 T 25-04-2016 APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 Gene3D G3DSA:3.40.50.300 299 422 4.2E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 SMART SM00490 315 398 2.2E-12 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 SMART SM00487 91 273 3.4E-10 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 Pfam PF04851 Type III restriction enzyme, res subunit 94 168 5.9E-5 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 Pfam PF00271 Helicase conserved C-terminal domain 296 397 4.0E-13 T 25-04-2016 IPR001650 Helicase, C-terminal APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 SUPERFAMILY SSF52540 112 408 2.3E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05495 698c6f0fd5ebba98b20971173af471e8 433 Gene3D G3DSA:3.40.50.300 90 254 4.4E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 SUPERFAMILY SSF51735 4 230 3.75E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PANTHER PTHR24322:SF590 10 138 4.6E-35 T 25-04-2016 APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PANTHER PTHR24322:SF590 154 175 4.6E-35 T 25-04-2016 APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PANTHER PTHR24322 10 138 4.6E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PANTHER PTHR24322 154 175 4.6E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 Gene3D G3DSA:3.40.50.720 5 216 2.7E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 Pfam PF00106 short chain dehydrogenase 7 196 4.3E-30 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS07890 5237c3cef1c7cca367d549b09cf4d812 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS02700 08fc846d8316a8c1e2edf43729dc9107 128 SUPERFAMILY SSF53927 5 125 7.36E-46 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APQ13_RS02700 08fc846d8316a8c1e2edf43729dc9107 128 Gene3D G3DSA:3.40.140.10 4 125 4.3E-50 T 25-04-2016 APQ13_RS02700 08fc846d8316a8c1e2edf43729dc9107 128 PANTHER PTHR11644 4 124 5.9E-57 T 25-04-2016 APQ13_RS02700 08fc846d8316a8c1e2edf43729dc9107 128 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 92 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APQ13_RS02700 08fc846d8316a8c1e2edf43729dc9107 128 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 126 1.5E-45 T 25-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APQ13_RS02700 08fc846d8316a8c1e2edf43729dc9107 128 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 95 1.2E-14 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 SUPERFAMILY SSF50249 1 131 3.19E-37 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 117 1.4E-31 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 Pfam PF00436 Single-strand binding protein family 3 101 6.7E-28 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 PANTHER PTHR10302 1 121 3.9E-33 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 Gene3D G3DSA:2.40.50.140 1 117 1.4E-36 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 PIRSF PIRSF002070 1 125 8.5E-31 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS08715 94ec3e48919a9347a44def4e100879fb 131 Hamap MF_00984 Single-stranded DNA-binding protein. 2 106 30.712 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APQ13_RS01460 ae2ef5e9fb5b1cbca38f8fd89934c7d6 125 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 106 2.2E-12 T 25-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system APQ13_RS01460 ae2ef5e9fb5b1cbca38f8fd89934c7d6 125 SUPERFAMILY SSF143100 2 64 1.14E-15 T 25-04-2016 APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 Gene3D G3DSA:3.40.1280.10 96 247 7.9E-52 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 10 247 2.0E-79 T 25-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 12 85 7.3E-16 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 SUPERFAMILY SSF55315 3 82 1.63E-19 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 Pfam PF00588 SpoU rRNA Methylase family 102 241 1.7E-41 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 SMART SM00967 12 86 1.2E-14 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 PANTHER PTHR12029 1 245 1.6E-82 T 25-04-2016 APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 Gene3D G3DSA:3.30.1330.30 5 81 1.4E-22 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like APQ13_RS06950 5c2fb81aeb5ee03d7ea91499eb3e88ee 248 SUPERFAMILY SSF75217 80 247 1.57E-48 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases APQ13_RS06870 7f118c36fb05498eb638832e84ab958f 279 Pfam PF00950 ABC 3 transport family 11 266 1.3E-88 T 25-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APQ13_RS06870 7f118c36fb05498eb638832e84ab958f 279 PANTHER PTHR30477 4 279 8.1E-121 T 25-04-2016 APQ13_RS06870 7f118c36fb05498eb638832e84ab958f 279 PANTHER PTHR30477:SF13 4 279 8.1E-121 T 25-04-2016 APQ13_RS06870 7f118c36fb05498eb638832e84ab958f 279 Gene3D G3DSA:1.10.3470.10 14 263 1.2E-11 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS06870 7f118c36fb05498eb638832e84ab958f 279 SUPERFAMILY SSF81345 7 262 2.75E-43 T 25-04-2016 IPR029022 ABC transporter, BtuC-like APQ13_RS01850 6e89b4167f87d8715c78fc169a5f3f2c 115 Pfam PF07883 Cupin domain 42 107 4.2E-9 T 25-04-2016 IPR013096 Cupin 2, conserved barrel APQ13_RS01850 6e89b4167f87d8715c78fc169a5f3f2c 115 PANTHER PTHR37694 2 113 2.1E-25 T 25-04-2016 APQ13_RS01850 6e89b4167f87d8715c78fc169a5f3f2c 115 SUPERFAMILY SSF51182 3 108 3.34E-24 T 25-04-2016 IPR011051 RmlC-like cupin domain APQ13_RS01850 6e89b4167f87d8715c78fc169a5f3f2c 115 Gene3D G3DSA:2.60.120.10 3 111 1.6E-33 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS03985 b6384f301c2a443e737941a05f0602a7 465 PANTHER PTHR22916 3 231 1.9E-46 T 25-04-2016 APQ13_RS03985 b6384f301c2a443e737941a05f0602a7 465 PANTHER PTHR22916:SF2 3 231 1.9E-46 T 25-04-2016 APQ13_RS03985 b6384f301c2a443e737941a05f0602a7 465 Gene3D G3DSA:3.90.550.10 3 240 1.5E-36 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS03985 b6384f301c2a443e737941a05f0602a7 465 Pfam PF00535 Glycosyl transferase family 2 5 114 5.6E-21 T 25-04-2016 IPR001173 Glycosyltransferase 2-like APQ13_RS03985 b6384f301c2a443e737941a05f0602a7 465 SUPERFAMILY SSF53448 3 228 1.69E-40 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS01155 cbf6e5095c78b0ad453dd0ed9fe1b00e 210 Pfam PF06445 GyrI-like small molecule binding domain 18 205 6.4E-36 T 25-04-2016 IPR029442 GyrI-like small molecule binding domain APQ13_RS01155 cbf6e5095c78b0ad453dd0ed9fe1b00e 210 SUPERFAMILY SSF55136 96 200 7.32E-7 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain APQ13_RS01155 cbf6e5095c78b0ad453dd0ed9fe1b00e 210 PIRSF PIRSF031644 1 210 1.3E-92 T 25-04-2016 IPR008319 Uncharacterised conserved protein UCP031644 APQ13_RS01155 cbf6e5095c78b0ad453dd0ed9fe1b00e 210 Gene3D G3DSA:3.20.80.10 1 208 1.8E-78 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain APQ13_RS03310 2f7f673fa534d7dd5308015e9007dd07 166 Pfam PF05257 CHAP domain 56 143 8.6E-7 T 25-04-2016 IPR007921 CHAP domain APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 SUPERFAMILY SSF50346 99 168 3.92E-18 T 25-04-2016 IPR011033 PRC-barrel-like APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 SUPERFAMILY SSF50447 3 91 1.24E-19 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 Gene3D G3DSA:2.40.30.60 3 91 5.9E-14 T 25-04-2016 IPR002676 RimM protein GO:0006364 APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 168 23.037 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 Pfam PF01782 RimM N-terminal domain 6 89 9.0E-20 T 25-04-2016 IPR002676 RimM protein GO:0006364 APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 Pfam PF05239 PRC-barrel domain 97 167 3.3E-10 T 25-04-2016 IPR027275 PRC-barrel domain APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 PANTHER PTHR33692:SF1 3 172 2.7E-55 T 25-04-2016 APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 Gene3D G3DSA:2.30.30.240 99 168 3.6E-22 T 25-04-2016 APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 PANTHER PTHR33692 3 172 2.7E-55 T 25-04-2016 APQ13_RS03805 976c4b78d021122ca7703e11ce564a2a 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 167 8.0E-49 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APQ13_RS02035 0498afd9bf63c1183e112c482c7dd954 115 SUPERFAMILY SSF50118 4 113 5.67E-24 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APQ13_RS02035 0498afd9bf63c1183e112c482c7dd954 115 PANTHER PTHR33988 2 114 1.6E-16 T 25-04-2016 APQ13_RS02035 0498afd9bf63c1183e112c482c7dd954 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 107 1.4E-17 T 25-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 APQ13_RS02035 0498afd9bf63c1183e112c482c7dd954 115 Gene3D G3DSA:2.30.30.110 4 113 8.8E-28 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 Pfam PF13087 AAA domain 552 715 4.7E-24 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 Pfam PF10881 Protein of unknown function (DUF2726) 774 894 7.1E-10 T 25-04-2016 IPR024402 Domain of unknown function DUF2726 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 PANTHER PTHR10887 385 742 4.8E-61 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 PANTHER PTHR10887 45 50 4.8E-61 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 PANTHER PTHR10887 175 246 4.8E-61 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 Pfam PF13086 AAA domain 178 532 3.4E-27 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 SUPERFAMILY SSF52540 456 714 1.11E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 SUPERFAMILY SSF52540 176 244 1.11E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 PANTHER PTHR10887:SF340 385 742 4.8E-61 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 PANTHER PTHR10887:SF340 45 50 4.8E-61 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 PANTHER PTHR10887:SF340 175 246 4.8E-61 T 25-04-2016 APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 Gene3D G3DSA:3.40.50.300 585 739 8.4E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 Gene3D G3DSA:3.40.50.300 158 285 6.8E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS02535 bcbfb83c1d9f5604ee3cbffcb23b9108 899 Gene3D G3DSA:3.40.50.300 489 584 6.8E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08375 284860d76a9f4d45ea375ce417221a25 154 PANTHER PTHR40028:SF1 1 150 2.0E-57 T 25-04-2016 APQ13_RS08375 284860d76a9f4d45ea375ce417221a25 154 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 5 147 3.2E-49 T 25-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 APQ13_RS08375 284860d76a9f4d45ea375ce417221a25 154 PIRSF PIRSF010607 1 151 6.0E-61 T 25-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 APQ13_RS08375 284860d76a9f4d45ea375ce417221a25 154 PANTHER PTHR40028 1 150 2.0E-57 T 25-04-2016 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 PIRSF PIRSF005485 1 333 2.6E-74 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 SUPERFAMILY SSF55781 69 332 3.14E-30 T 25-04-2016 IPR029016 GAF domain-like APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 PANTHER PTHR30363 1 306 6.9E-67 T 25-04-2016 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 322 27.041 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 PANTHER PTHR30363:SF17 1 306 6.9E-67 T 25-04-2016 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 Gene3D G3DSA:1.10.10.10 2 81 6.4E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 326 2.6E-81 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 Pfam PF01628 HrcA protein C terminal domain 103 315 1.1E-27 T 25-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 56 6.6E-8 T 25-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 Gene3D G3DSA:3.30.450.40 182 329 5.8E-11 T 25-04-2016 IPR029016 GAF domain-like APQ13_RS07245 4d628f53ea2e4bdb710b19f436ceafc2 344 SUPERFAMILY SSF46785 2 81 3.96E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS07220 20ccc76bd2cbb383c98871ebee09e51f 255 SUPERFAMILY SSF53613 4 247 1.71E-55 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS07220 20ccc76bd2cbb383c98871ebee09e51f 255 Pfam PF08543 Phosphomethylpyrimidine kinase 13 247 1.7E-59 T 25-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APQ13_RS07220 20ccc76bd2cbb383c98871ebee09e51f 255 PANTHER PTHR20858 1 250 5.8E-58 T 25-04-2016 APQ13_RS07220 20ccc76bd2cbb383c98871ebee09e51f 255 Gene3D G3DSA:3.40.1190.20 5 248 4.7E-64 T 25-04-2016 IPR029056 Ribokinase-like APQ13_RS00775 a7213e2ba48e2d702bb7d552957d46ba 137 SUPERFAMILY SSF103481 41 136 1.44E-13 T 25-04-2016 APQ13_RS00775 a7213e2ba48e2d702bb7d552957d46ba 137 Pfam PF00892 EamA-like transporter family 2 136 5.8E-23 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APQ13_RS00775 a7213e2ba48e2d702bb7d552957d46ba 137 PANTHER PTHR22911 1 136 3.9E-21 T 25-04-2016 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 283 3.0E-144 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 291 2.6E-152 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 SUPERFAMILY SSF55681 6 283 1.27E-126 T 25-04-2016 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 Gene3D G3DSA:3.30.930.10 2 207 1.5E-99 T 25-04-2016 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 Gene3D G3DSA:1.20.58.180 209 290 6.9E-37 T 25-04-2016 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 285 57.028 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 1.4E-64 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 1.4E-64 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 1.4E-64 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 1.4E-64 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 1.4E-64 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 1.4E-64 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APQ13_RS05735 d87ddf1f6daa45624d6bd98017e559e9 305 PANTHER PTHR30075 1 304 8.3E-237 T 25-04-2016 APQ13_RS06900 a953d2f759c70282db2310780f2d4acd 406 PANTHER PTHR33989 230 392 5.4E-25 T 25-04-2016 APQ13_RS06900 a953d2f759c70282db2310780f2d4acd 406 PANTHER PTHR33989:SF4 230 392 5.4E-25 T 25-04-2016 APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 PANTHER PTHR24220:SF471 3 257 8.7E-132 T 25-04-2016 APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 SUPERFAMILY SSF52540 2 226 4.99E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 PANTHER PTHR24220 3 257 8.7E-132 T 25-04-2016 APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 Gene3D G3DSA:3.40.50.300 1 228 2.0E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 SMART SM00382 26 213 3.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS03240 621d96a0224aa8c2b1545121e391bc11 268 Pfam PF00005 ABC transporter 17 164 1.3E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS09375 6d862c06c8448a75298149568350fe76 366 PANTHER PTHR37825 2 364 1.2E-88 T 25-04-2016 APQ13_RS09375 6d862c06c8448a75298149568350fe76 366 Hamap MF_01539 UPF0348 protein . 2 361 33.446 T 25-04-2016 IPR008513 Uncharacterised protein family UPF0348 APQ13_RS09375 6d862c06c8448a75298149568350fe76 366 PANTHER PTHR37825:SF1 2 364 1.2E-88 T 25-04-2016 APQ13_RS09375 6d862c06c8448a75298149568350fe76 366 Gene3D G3DSA:3.40.50.620 1 212 3.9E-72 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APQ13_RS09375 6d862c06c8448a75298149568350fe76 366 Pfam PF05636 HIGH Nucleotidyl Transferase 1 347 1.2E-105 T 25-04-2016 IPR008513 Uncharacterised protein family UPF0348 APQ13_RS09375 6d862c06c8448a75298149568350fe76 366 SUPERFAMILY SSF52374 10 109 6.52E-18 T 25-04-2016 APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 SMART SM00986 27 185 5.8E-22 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 PANTHER PTHR42160:SF1 1 195 1.6E-97 T 25-04-2016 APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 PANTHER PTHR42160 1 195 1.6E-97 T 25-04-2016 APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 SMART SM00987 27 185 5.8E-22 T 25-04-2016 APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 Gene3D G3DSA:3.40.470.10 3 193 6.0E-35 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 SUPERFAMILY SSF52141 3 192 2.81E-47 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02175 6319425983912d640dbaf3db3b95c74c 195 Pfam PF03167 Uracil DNA glycosylase superfamily 32 185 6.7E-19 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like APQ13_RS02895 e22a1a25f132cfb92accb734bc625013 204 PANTHER PTHR34135:SF3 1 203 4.3E-53 T 25-04-2016 APQ13_RS02895 e22a1a25f132cfb92accb734bc625013 204 Pfam PF13702 Lysozyme-like 29 191 3.9E-60 T 25-04-2016 APQ13_RS02895 e22a1a25f132cfb92accb734bc625013 204 Gene3D G3DSA:1.10.530.10 28 149 2.3E-8 T 25-04-2016 APQ13_RS02895 e22a1a25f132cfb92accb734bc625013 204 PANTHER PTHR34135 1 203 4.3E-53 T 25-04-2016 APQ13_RS02895 e22a1a25f132cfb92accb734bc625013 204 SUPERFAMILY SSF53955 33 149 3.66E-10 T 25-04-2016 IPR023346 Lysozyme-like domain APQ13_RS07760 2bfa26c355283d04bffd35aba5afddf5 264 PANTHER PTHR33514:SF2 1 263 5.7E-121 T 25-04-2016 APQ13_RS07760 2bfa26c355283d04bffd35aba5afddf5 264 Pfam PF02361 Cobalt transport protein 14 232 2.4E-48 T 25-04-2016 IPR003339 ABC/ECF transporter, transmembrane component APQ13_RS07760 2bfa26c355283d04bffd35aba5afddf5 264 PANTHER PTHR33514 1 263 5.7E-121 T 25-04-2016 APQ13_RS07760 2bfa26c355283d04bffd35aba5afddf5 264 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 36.514 T 25-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 SUPERFAMILY SSF53335 12 500 4.56E-139 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 270 282 2.0E-12 T 25-04-2016 APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 2.0E-12 T 25-04-2016 APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 210 2.0E-12 T 25-04-2016 APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 Pfam PF02384 N-6 DNA Methylase 149 460 2.3E-113 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 Gene3D G3DSA:3.40.50.150 175 407 5.4E-32 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 PANTHER PTHR30408:SF8 95 480 6.4E-153 T 25-04-2016 APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 Pfam PF12161 HsdM N-terminal domain 12 138 3.6E-23 T 25-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain APQ13_RS02050 23b6123f9f615329426ea0dfca9f8da6 502 PANTHER PTHR30408 95 480 6.4E-153 T 25-04-2016 APQ13_RS01000 57b27226e8618fe60b8b4e31e95c03d5 173 SUPERFAMILY SSF55729 1 166 9.29E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS01000 57b27226e8618fe60b8b4e31e95c03d5 173 Gene3D G3DSA:3.40.630.30 3 161 4.8E-38 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS01000 57b27226e8618fe60b8b4e31e95c03d5 173 Pfam PF00583 Acetyltransferase (GNAT) family 69 149 1.7E-12 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS01000 57b27226e8618fe60b8b4e31e95c03d5 173 PANTHER PTHR23091:SF257 1 172 7.0E-43 T 25-04-2016 APQ13_RS01000 57b27226e8618fe60b8b4e31e95c03d5 173 PANTHER PTHR23091 1 172 7.0E-43 T 25-04-2016 APQ13_RS08220 193e153181b18311f3f6621ae1c9c105 233 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS08220 193e153181b18311f3f6621ae1c9c105 233 SUPERFAMILY SSF52540 2 218 1.47E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08220 193e153181b18311f3f6621ae1c9c105 233 Gene3D G3DSA:3.40.50.300 2 223 2.3E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08220 193e153181b18311f3f6621ae1c9c105 233 Pfam PF00005 ABC transporter 21 164 7.2E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS08220 193e153181b18311f3f6621ae1c9c105 233 PANTHER PTHR24220 7 218 2.2E-81 T 25-04-2016 APQ13_RS08220 193e153181b18311f3f6621ae1c9c105 233 SMART SM00382 30 213 4.2E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS04700 3bbd314a6e5721505ec8aa80e29a4b13 319 PIRSF PIRSF000355 1 314 1.0E-72 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APQ13_RS04700 3bbd314a6e5721505ec8aa80e29a4b13 319 Pfam PF00268 Ribonucleotide reductase, small chain 8 278 1.8E-83 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APQ13_RS04700 3bbd314a6e5721505ec8aa80e29a4b13 319 PANTHER PTHR23409 8 318 9.9E-85 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APQ13_RS04700 3bbd314a6e5721505ec8aa80e29a4b13 319 Gene3D G3DSA:1.10.620.20 5 280 3.8E-86 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APQ13_RS04700 3bbd314a6e5721505ec8aa80e29a4b13 319 SUPERFAMILY SSF47240 3 315 1.62E-98 T 25-04-2016 IPR009078 Ferritin-like superfamily APQ13_RS04700 3bbd314a6e5721505ec8aa80e29a4b13 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 316 8.8E-149 T 25-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APQ13_RS07040 e8f3d23ac20a03e94a64d6a975719b96 314 PANTHER PTHR36838 3 314 1.8E-30 T 25-04-2016 APQ13_RS07040 e8f3d23ac20a03e94a64d6a975719b96 314 Pfam PF03547 Membrane transport protein 7 155 1.0E-17 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APQ13_RS07040 e8f3d23ac20a03e94a64d6a975719b96 314 Pfam PF03547 Membrane transport protein 172 308 3.4E-12 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APQ13_RS07595 8f7e220c7d5d07cad799dc47f70e05b4 470 PIRSF PIRSF006060 5 461 6.7E-75 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS07595 8f7e220c7d5d07cad799dc47f70e05b4 470 PANTHER PTHR11785:SF342 12 460 2.5E-132 T 25-04-2016 APQ13_RS07595 8f7e220c7d5d07cad799dc47f70e05b4 470 PANTHER PTHR11785 12 460 2.5E-132 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS07595 8f7e220c7d5d07cad799dc47f70e05b4 470 Pfam PF13520 Amino acid permease 21 428 4.5E-46 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 PANTHER PTHR30193 123 449 2.9E-80 T 25-04-2016 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 Gene3D G3DSA:1.10.3720.10 214 443 3.1E-55 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 Gene3D G3DSA:1.20.58.370 156 185 5.2E-5 T 25-04-2016 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 SUPERFAMILY SSF160964 144 200 9.55E-7 T 25-04-2016 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 SUPERFAMILY SSF161098 200 439 5.76E-51 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 235 440 1.5E-22 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS00735 ed1065e51ddb5fec2ec62be198ded639 453 PANTHER PTHR30193:SF17 123 449 2.9E-80 T 25-04-2016 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 PANTHER PTHR11835:SF52 177 389 8.8E-203 T 25-04-2016 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 PANTHER PTHR11835:SF52 8 153 8.8E-203 T 25-04-2016 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 PANTHER PTHR11835 177 389 8.8E-203 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 PANTHER PTHR11835 8 153 8.8E-203 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 279 298 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 Gene3D G3DSA:3.40.718.10 3 390 2.0E-147 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 391 1.8E-173 T 25-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 20 387 5.1E-103 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 SMART SM01329 19 389 1.4E-165 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APQ13_RS04675 3f24dae766014d19af22ee96ee10ca7b 393 SUPERFAMILY SSF53659 4 392 1.44E-130 T 25-04-2016 APQ13_RS03740 7a51cde32d4b0fb1d037f09c930d38d1 290 PANTHER PTHR30193 1 289 9.8E-88 T 25-04-2016 APQ13_RS03740 7a51cde32d4b0fb1d037f09c930d38d1 290 Gene3D G3DSA:1.10.3720.10 6 281 4.4E-53 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03740 7a51cde32d4b0fb1d037f09c930d38d1 290 PANTHER PTHR30193:SF6 1 289 9.8E-88 T 25-04-2016 APQ13_RS03740 7a51cde32d4b0fb1d037f09c930d38d1 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 277 6.8E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03740 7a51cde32d4b0fb1d037f09c930d38d1 290 SUPERFAMILY SSF161098 55 279 6.28E-50 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 Pfam PF04471 Restriction endonuclease 668 779 3.3E-26 T 25-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 Gene3D G3DSA:3.40.50.150 392 499 1.0E-7 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 Gene3D G3DSA:3.40.50.150 30 94 1.3E-11 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 Gene3D G3DSA:3.40.50.150 313 353 1.0E-7 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 PANTHER PTHR30015 670 787 8.5E-19 T 25-04-2016 APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 SUPERFAMILY SSF53335 25 91 2.03E-13 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 Gene3D G3DSA:3.40.1350.10 666 783 4.9E-26 T 25-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 SUPERFAMILY SSF53335 317 353 9.97E-6 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 SUPERFAMILY SSF53335 395 513 9.97E-6 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 Pfam PF01555 DNA methylase 24 87 4.3E-11 T 25-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APQ13_RS04250 671d60919d2fdc683bf6d0ee7ab6643c 794 SUPERFAMILY SSF52980 671 784 3.81E-20 T 25-04-2016 IPR011335 Restriction endonuclease type II-like APQ13_RS04155 b8dc5aaeb40fa5b750220cb345f22c84 211 Pfam PF02517 CAAX protease self-immunity 105 200 7.6E-13 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 APQ13_RS03300 ead871cbfb1a7442c15ffbfffa0e5fc8 171 Pfam PF01381 Helix-turn-helix 21 50 5.6E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS03300 ead871cbfb1a7442c15ffbfffa0e5fc8 171 Gene3D G3DSA:1.10.260.40 16 115 8.8E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS03300 ead871cbfb1a7442c15ffbfffa0e5fc8 171 SUPERFAMILY SSF47413 14 52 5.07E-7 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS09330 874a673d55541680b5a4966d83872876 175 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 7 168 3.2E-40 T 25-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like APQ13_RS09330 874a673d55541680b5a4966d83872876 175 Pfam PF13242 HAD-hyrolase-like 93 147 1.9E-12 T 25-04-2016 APQ13_RS09330 874a673d55541680b5a4966d83872876 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 3.6E-17 T 25-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APQ13_RS09330 874a673d55541680b5a4966d83872876 175 Gene3D G3DSA:3.40.50.1000 12 157 2.8E-27 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS09330 874a673d55541680b5a4966d83872876 175 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 61 131 1.1E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APQ13_RS09330 874a673d55541680b5a4966d83872876 175 PANTHER PTHR19288:SF25 7 159 8.4E-33 T 25-04-2016 APQ13_RS09330 874a673d55541680b5a4966d83872876 175 PANTHER PTHR19288 7 159 8.4E-33 T 25-04-2016 APQ13_RS09330 874a673d55541680b5a4966d83872876 175 SUPERFAMILY SSF56784 4 148 2.1E-27 T 25-04-2016 IPR023214 HAD-like domain APQ13_RS07870 eb4fc3b22ad7d8da252efa16289ac7c1 221 SUPERFAMILY SSF161098 20 200 3.4E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS07870 eb4fc3b22ad7d8da252efa16289ac7c1 221 PANTHER PTHR30151:SF23 20 221 5.9E-73 T 25-04-2016 APQ13_RS07870 eb4fc3b22ad7d8da252efa16289ac7c1 221 PANTHER PTHR30151 20 221 5.9E-73 T 25-04-2016 APQ13_RS07870 eb4fc3b22ad7d8da252efa16289ac7c1 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 215 1.1E-25 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS07870 eb4fc3b22ad7d8da252efa16289ac7c1 221 Gene3D G3DSA:1.10.3720.10 15 200 2.5E-28 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS07940 c493c2cec87014022f5e44633c717b8c 60 PANTHER PTHR35534 1 60 1.1E-26 T 25-04-2016 APQ13_RS07940 c493c2cec87014022f5e44633c717b8c 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-19 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APQ13_RS07940 c493c2cec87014022f5e44633c717b8c 60 SUPERFAMILY SSF57829 2 54 1.65E-16 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APQ13_RS07940 c493c2cec87014022f5e44633c717b8c 60 Pfam PF01783 Ribosomal L32p protein family 2 54 3.5E-19 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APQ13_RS07940 c493c2cec87014022f5e44633c717b8c 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.706 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APQ13_RS04875 c35f04cb3bad9aa7354a6fdf326a2b2c 252 Pfam PF10086 Putative membrane peptidase family (DUF2324) 11 228 4.3E-74 T 25-04-2016 IPR011397 Uncharacterised conserved protein UCP033101 APQ13_RS04875 c35f04cb3bad9aa7354a6fdf326a2b2c 252 PIRSF PIRSF033101 1 251 3.4E-99 T 25-04-2016 IPR011397 Uncharacterised conserved protein UCP033101 APQ13_RS05315 e67410a28633385fe506c7b8873848e7 93 Gene3D G3DSA:3.30.70.900 1 89 1.4E-23 T 25-04-2016 APQ13_RS05315 e67410a28633385fe506c7b8873848e7 93 SUPERFAMILY SSF54909 4 91 1.49E-21 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel APQ13_RS05315 e67410a28633385fe506c7b8873848e7 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 69 2.8E-14 T 25-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APQ13_RS05315 e67410a28633385fe506c7b8873848e7 93 PANTHER PTHR33336 1 69 9.4E-17 T 25-04-2016 APQ13_RS06435 cb3d5a9f05ea49995508e6f9a164a1c3 147 Gene3D G3DSA:2.40.50.40 39 106 2.6E-17 T 25-04-2016 APQ13_RS06435 cb3d5a9f05ea49995508e6f9a164a1c3 147 Gene3D G3DSA:2.20.25.10 110 143 1.3E-7 T 25-04-2016 APQ13_RS06435 cb3d5a9f05ea49995508e6f9a164a1c3 147 PANTHER PTHR37299 1 143 1.6E-23 T 25-04-2016 APQ13_RS06435 cb3d5a9f05ea49995508e6f9a164a1c3 147 Pfam PF04397 LytTr DNA-binding domain 48 143 7.0E-25 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS06435 cb3d5a9f05ea49995508e6f9a164a1c3 147 SMART SM00850 47 144 5.2E-28 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS00095 e7e8f58891301c3399d3c78b9f051dfe 479 Pfam PF02386 Cation transport protein 41 472 7.1E-48 T 25-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APQ13_RS00095 e7e8f58891301c3399d3c78b9f051dfe 479 PANTHER PTHR32024 1 478 3.7E-187 T 25-04-2016 APQ13_RS00095 e7e8f58891301c3399d3c78b9f051dfe 479 PANTHER PTHR32024:SF2 1 478 3.7E-187 T 25-04-2016 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 Gene3D G3DSA:3.30.540.10 4 155 3.4E-32 T 25-04-2016 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 7.1E-21 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 7.1E-21 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 201 225 7.1E-21 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 7.1E-21 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 171 192 7.1E-21 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PANTHER PTHR20854 1 238 9.2E-50 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 PANTHER PTHR20854:SF4 1 238 9.2E-50 T 25-04-2016 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 Gene3D G3DSA:3.40.190.80 160 248 4.1E-16 T 25-04-2016 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 SUPERFAMILY SSF56655 5 251 6.15E-56 T 25-04-2016 APQ13_RS02615 b501c18551dc33ebcb15945140d1378d 252 Pfam PF00459 Inositol monophosphatase family 6 233 5.8E-38 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 Pfam PF01368 DHH family 3 146 4.7E-26 T 25-04-2016 IPR001667 DDH domain APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 SMART SM01131 182 308 2.2E-56 T 25-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 SUPERFAMILY SSF64182 3 310 2.62E-86 T 25-04-2016 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 Gene3D G3DSA:3.90.1640.10 2 188 1.3E-64 T 25-04-2016 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 Pfam PF02833 DHHA2 domain 184 306 4.9E-17 T 25-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 PANTHER PTHR12112:SF17 4 310 1.3E-117 T 25-04-2016 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 PANTHER PTHR12112 4 310 1.3E-117 T 25-04-2016 APQ13_RS00195 e663dda310b8f367cb73fd7a1ae46f18 310 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 310 45.07 T 25-04-2016 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 APQ13_RS08975 3eb7a60fe4ba4c4e3d14dc6acc5d7223 112 PANTHER PTHR33795 1 67 6.5E-18 T 25-04-2016 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 Pfam PF14437 MafB19-like deaminase 9 153 1.1E-35 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 95 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 PANTHER PTHR11079:SF72 10 156 4.8E-50 T 25-04-2016 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 PANTHER PTHR11079 10 156 4.8E-50 T 25-04-2016 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 SUPERFAMILY SSF53927 8 154 1.15E-51 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 Gene3D G3DSA:3.40.140.10 5 151 2.7E-58 T 25-04-2016 APQ13_RS06370 10c79a80e82123d7d0f6b8ae3cc7cb92 156 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 154 43.807 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 142 3.5E-22 T 25-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APQ13_RS06075 1129243f353d011bfed16227140f9541 478 Gene3D G3DSA:3.50.50.60 246 413 2.6E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 SUPERFAMILY SSF51971 154 414 7.65E-66 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PANTHER PTHR11938:SF75 346 475 8.7E-132 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PANTHER PTHR11938:SF75 22 330 8.7E-132 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PANTHER PTHR11938 346 475 8.7E-132 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PANTHER PTHR11938 22 330 8.7E-132 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 Gene3D G3DSA:3.40.50.720 414 473 4.8E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06075 1129243f353d011bfed16227140f9541 478 Gene3D G3DSA:3.40.50.720 159 245 4.8E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 5.9E-23 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PRINTS PR00419 Adrenodoxin reductase family signature 222 232 5.9E-23 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PRINTS PR00419 Adrenodoxin reductase family signature 157 179 5.9E-23 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 PRINTS PR00419 Adrenodoxin reductase family signature 180 193 5.9E-23 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 SUPERFAMILY SSF46548 5 166 2.77E-33 T 25-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 Gene3D G3DSA:1.10.1060.10 3 158 1.2E-37 T 25-04-2016 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 472 2.6E-178 T 25-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 APQ13_RS06075 1129243f353d011bfed16227140f9541 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 156 461 2.1E-25 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Gene3D G3DSA:3.20.20.80 142 508 1.1E-80 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Pfam PF00128 Alpha amylase, catalytic domain 172 246 1.0E-6 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 10 619 9.2E-204 T 25-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 1 623 37.181 T 25-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 SUPERFAMILY SSF81296 34 102 2.03E-10 T 25-04-2016 IPR014756 Immunoglobulin E-set APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 SUPERFAMILY SSF51445 79 514 1.08E-95 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 PANTHER PTHR10357 12 622 3.4E-281 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 PANTHER PTHR10357:SF160 12 622 3.4E-281 T 25-04-2016 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 22 103 7.6E-18 T 25-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Gene3D G3DSA:2.60.40.1180 520 622 1.8E-27 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 526 622 5.7E-17 T 25-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 Gene3D G3DSA:2.60.40.10 10 116 6.4E-29 T 25-04-2016 IPR013783 Immunoglobulin-like fold APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 SMART SM00642 147 507 2.3E-7 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 SUPERFAMILY SSF51011 521 623 8.39E-25 T 25-04-2016 APQ13_RS00865 fcaae49fe8a97b28e67493f1e59bf3c6 628 PIRSF PIRSF000463 1 628 4.7E-246 T 25-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APQ13_RS09305 9efd7254d0f43367ad21e41ab683efe7 302 Pfam PF00892 EamA-like transporter family 158 290 1.2E-16 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APQ13_RS09305 9efd7254d0f43367ad21e41ab683efe7 302 Pfam PF00892 EamA-like transporter family 6 144 1.5E-15 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APQ13_RS09305 9efd7254d0f43367ad21e41ab683efe7 302 SUPERFAMILY SSF103481 41 148 1.83E-10 T 25-04-2016 APQ13_RS09305 9efd7254d0f43367ad21e41ab683efe7 302 PANTHER PTHR22911:SF65 1 295 5.0E-64 T 25-04-2016 APQ13_RS09305 9efd7254d0f43367ad21e41ab683efe7 302 PANTHER PTHR22911 1 295 5.0E-64 T 25-04-2016 APQ13_RS09305 9efd7254d0f43367ad21e41ab683efe7 302 SUPERFAMILY SSF103481 195 293 1.14E-7 T 25-04-2016 APQ13_RS02990 9a6ad83c80109fca267deaa031f14ba2 110 Gene3D G3DSA:1.10.10.10 1 106 3.7E-41 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS02990 9a6ad83c80109fca267deaa031f14ba2 110 PANTHER PTHR40083 2 110 8.8E-42 T 25-04-2016 APQ13_RS02990 9a6ad83c80109fca267deaa031f14ba2 110 SUPERFAMILY SSF88659 2 104 9.91E-33 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS02990 9a6ad83c80109fca267deaa031f14ba2 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 100 3.6E-42 T 25-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like APQ13_RS02990 9a6ad83c80109fca267deaa031f14ba2 110 Hamap MF_00245 UPF0122 protein . 3 103 21.383 T 25-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like APQ13_RS09020 350f3ca3d8eefdf29f5fd9cadaa4ab4f 357 Pfam PF01757 Acyltransferase family 15 324 2.4E-28 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 SUPERFAMILY SSF53098 1 137 7.13E-43 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 Pfam PF03652 Holliday junction resolvase 1 136 4.1E-43 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 SMART SM00732 1 103 1.4E-42 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 Gene3D G3DSA:3.30.420.140 1 137 7.5E-50 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 PANTHER PTHR33317 1 138 2.1E-43 T 25-04-2016 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 PANTHER PTHR33317:SF1 1 138 2.1E-43 T 25-04-2016 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 139 27.194 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APQ13_RS08060 ada3044401c0ecd6d2acae7e99c19def 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 136 2.5E-44 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APQ13_RS07010 8ac2170207368cb2e00a77c4a40d8043 394 Pfam PF07690 Major Facilitator Superfamily 11 268 3.9E-17 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS07010 8ac2170207368cb2e00a77c4a40d8043 394 Gene3D G3DSA:1.20.1250.20 213 385 2.4E-13 T 25-04-2016 APQ13_RS07010 8ac2170207368cb2e00a77c4a40d8043 394 Gene3D G3DSA:1.20.1250.20 10 191 1.7E-19 T 25-04-2016 APQ13_RS07010 8ac2170207368cb2e00a77c4a40d8043 394 SUPERFAMILY SSF103473 10 389 8.24E-38 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS01440 1a24592df221cfc33728261fe63f06f8 288 PANTHER PTHR34353 1 241 3.2E-27 T 25-04-2016 APQ13_RS01440 1a24592df221cfc33728261fe63f06f8 288 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 273 6.2E-102 T 25-04-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype APQ13_RS01440 1a24592df221cfc33728261fe63f06f8 288 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 240 2.1E-23 T 25-04-2016 IPR002729 CRISPR-associated protein Cas1 APQ13_RS01440 1a24592df221cfc33728261fe63f06f8 288 Pfam PF01867 CRISPR associated protein Cas1 7 239 1.8E-22 T 25-04-2016 IPR002729 CRISPR-associated protein Cas1 APQ13_RS01440 1a24592df221cfc33728261fe63f06f8 288 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 4 286 13.282 T 25-04-2016 IPR002729 CRISPR-associated protein Cas1 APQ13_RS01310 a5fa7ae872709b8b2df68e40332c8331 436 PANTHER PTHR10859 32 337 3.6E-46 T 25-04-2016 APQ13_RS01310 a5fa7ae872709b8b2df68e40332c8331 436 PANTHER PTHR10859:SF37 32 337 3.6E-46 T 25-04-2016 APQ13_RS01310 a5fa7ae872709b8b2df68e40332c8331 436 SUPERFAMILY SSF53448 46 321 1.43E-44 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS01310 a5fa7ae872709b8b2df68e40332c8331 436 Gene3D G3DSA:3.90.550.10 49 297 2.2E-32 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APQ13_RS01310 a5fa7ae872709b8b2df68e40332c8331 436 Pfam PF13641 Glycosyltransferase like family 2 49 279 2.7E-25 T 25-04-2016 APQ13_RS02235 fb49ae46b029ae5078fc840f4f779620 255 Pfam PF09659 CRISPR-associated protein (Cas_Csm6) 3 250 7.4E-25 T 25-04-2016 IPR013489 CRISPR-associated protein Csm6 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 SUPERFAMILY SSF50129 321 372 2.92E-12 T 25-04-2016 IPR011032 GroES-like APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 SUPERFAMILY SSF51735 163 336 2.85E-45 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 Gene3D G3DSA:3.90.180.10 3 192 2.0E-68 T 25-04-2016 IPR011032 GroES-like APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 PANTHER PTHR11695:SF560 131 372 6.6E-202 T 25-04-2016 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 PANTHER PTHR11695:SF560 18 111 6.6E-202 T 25-04-2016 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 SUPERFAMILY SSF50129 3 187 8.37E-71 T 25-04-2016 IPR011032 GroES-like APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 Pfam PF00107 Zinc-binding dehydrogenase 200 319 3.6E-23 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 PANTHER PTHR11695 131 372 6.6E-202 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 PANTHER PTHR11695 18 111 6.6E-202 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 Gene3D G3DSA:3.40.50.720 193 312 1.6E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 SMART SM00829 13 370 0.002 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 4.6E-229 T 25-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 APQ13_RS07125 5d95783b55cd4cb41ce08393fe96d0f2 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 158 1.9E-26 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APQ13_RS02750 9b183d17927b27bf4ce83c6f260c70db 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 132 1.3E-15 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APQ13_RS02750 9b183d17927b27bf4ce83c6f260c70db 134 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 25-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APQ13_RS02750 9b183d17927b27bf4ce83c6f260c70db 134 Gene3D G3DSA:3.10.180.10 8 134 1.4E-38 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS02750 9b183d17927b27bf4ce83c6f260c70db 134 SUPERFAMILY SSF54593 1 134 2.01E-30 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS01325 791a2910f5d0b3f4af69466aa76d201a 262 PANTHER PTHR21343 1 250 4.5E-101 T 25-04-2016 APQ13_RS01325 791a2910f5d0b3f4af69466aa76d201a 262 Gene3D G3DSA:3.40.50.880 46 223 1.1E-16 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS01325 791a2910f5d0b3f4af69466aa76d201a 262 PANTHER PTHR21343:SF9 1 250 4.5E-101 T 25-04-2016 APQ13_RS01325 791a2910f5d0b3f4af69466aa76d201a 262 SUPERFAMILY SSF52317 34 207 7.31E-28 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like APQ13_RS01325 791a2910f5d0b3f4af69466aa76d201a 262 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 19 214 3.6E-46 T 25-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 APQ13_RS07765 7ee830e9440c46513efaba3a274eaf0f 288 Pfam PF01476 LysM domain 39 79 9.0E-13 T 25-04-2016 IPR018392 LysM domain APQ13_RS07765 7ee830e9440c46513efaba3a274eaf0f 288 Gene3D G3DSA:3.10.350.10 37 81 3.2E-16 T 25-04-2016 IPR018392 LysM domain APQ13_RS07765 7ee830e9440c46513efaba3a274eaf0f 288 Gene3D G3DSA:1.10.530.10 200 249 2.3E-4 T 25-04-2016 APQ13_RS07765 7ee830e9440c46513efaba3a274eaf0f 288 SMART SM00257 38 82 1.1E-13 T 25-04-2016 IPR018392 LysM domain APQ13_RS07765 7ee830e9440c46513efaba3a274eaf0f 288 SUPERFAMILY SSF54106 37 81 1.31E-10 T 25-04-2016 IPR018392 LysM domain APQ13_RS01855 585d7edf314b3bbf5d3a5fb9ea35172f 107 SUPERFAMILY SSF51182 4 100 4.63E-10 T 25-04-2016 IPR011051 RmlC-like cupin domain APQ13_RS01855 585d7edf314b3bbf5d3a5fb9ea35172f 107 Gene3D G3DSA:2.60.120.10 3 102 1.1E-18 T 25-04-2016 IPR014710 RmlC-like jelly roll fold APQ13_RS09525 b469e358b78f18c276c01a8a86a57114 102 SUPERFAMILY SSF81301 14 94 2.62E-5 T 25-04-2016 APQ13_RS09525 b469e358b78f18c276c01a8a86a57114 102 Gene3D G3DSA:3.30.460.10 25 94 2.7E-4 T 25-04-2016 APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 Gene3D G3DSA:1.10.3430.10 2 384 1.6E-133 T 25-04-2016 IPR029020 Ammonium/urea transporter APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 25-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 SUPERFAMILY SSF111352 2 384 1.16E-123 T 25-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 PANTHER PTHR11730 1 403 1.1E-173 T 25-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 Pfam PF00909 Ammonium Transporter Family 7 403 4.4E-119 T 25-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 PANTHER PTHR11730:SF17 1 403 1.1E-173 T 25-04-2016 APQ13_RS00330 6720b5222772bfcc1c841437f8376c0c 411 TIGRFAM TIGR00836 amt: ammonium transporter 6 403 1.4E-132 T 25-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APQ13_RS07385 c4eb11a725b3a41a9af528115fe43889 291 Pfam PF07751 Abi-like protein 33 213 4.1E-44 T 25-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like APQ13_RS07385 c4eb11a725b3a41a9af528115fe43889 291 PIRSF PIRSF034934 1 291 2.1E-86 T 25-04-2016 IPR017034 Abortive infection system protein AbiD/AbiF APQ13_RS07370 948b5cad815b059f01728c8559101703 393 Pfam PF02655 ATP-grasp domain 117 269 3.3E-6 T 25-04-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 APQ13_RS07370 948b5cad815b059f01728c8559101703 393 Gene3D G3DSA:3.30.1490.20 123 186 5.9E-5 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APQ13_RS07370 948b5cad815b059f01728c8559101703 393 Gene3D G3DSA:3.30.470.20 195 292 1.8E-17 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS07370 948b5cad815b059f01728c8559101703 393 SUPERFAMILY SSF56059 114 292 4.77E-22 T 25-04-2016 APQ13_RS01330 349210efab091add404ec8242b19e991 447 Pfam PF08245 Mur ligase middle domain 53 281 3.3E-14 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS01330 349210efab091add404ec8242b19e991 447 PANTHER PTHR23135:SF7 253 446 1.2E-130 T 25-04-2016 APQ13_RS01330 349210efab091add404ec8242b19e991 447 PANTHER PTHR23135:SF7 31 223 1.2E-130 T 25-04-2016 APQ13_RS01330 349210efab091add404ec8242b19e991 447 PANTHER PTHR23135 253 446 1.2E-130 T 25-04-2016 APQ13_RS01330 349210efab091add404ec8242b19e991 447 PANTHER PTHR23135 31 223 1.2E-130 T 25-04-2016 APQ13_RS01330 349210efab091add404ec8242b19e991 447 Pfam PF08353 Domain of unknown function (DUF1727) 319 429 6.6E-32 T 25-04-2016 IPR013564 Domain of unknown function DUF1727 APQ13_RS01330 349210efab091add404ec8242b19e991 447 Gene3D G3DSA:3.40.1190.10 38 189 2.8E-43 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS01330 349210efab091add404ec8242b19e991 447 Gene3D G3DSA:3.40.1190.10 223 298 2.8E-43 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS01330 349210efab091add404ec8242b19e991 447 SUPERFAMILY SSF53623 39 192 4.92E-36 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS01330 349210efab091add404ec8242b19e991 447 SUPERFAMILY SSF53623 224 296 4.92E-36 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APQ13_RS06095 b5f75b7734c0788784edfd9f25f845be 172 Pfam PF06081 Aromatic acid exporter family member 1 12 158 4.8E-13 T 25-04-2016 IPR010343 Aromatic acid exporter family member 1 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 638 1.0E-163 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 Pfam PF02421 Ferrous iron transport protein B 3 155 8.4E-64 T 25-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 Gene3D G3DSA:3.40.50.300 3 171 6.2E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 Pfam PF07664 Ferrous iron transport protein B C terminus 456 506 8.4E-15 T 25-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 Pfam PF07670 Nucleoside recognition 352 446 2.0E-13 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 Pfam PF07670 Nucleoside recognition 513 641 1.2E-30 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 PANTHER PTHR11649 1 143 1.9E-240 T 25-04-2016 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 PANTHER PTHR11649 261 677 1.9E-240 T 25-04-2016 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 2.7E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 2.7E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 PANTHER PTHR11649:SF37 1 143 1.9E-240 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 PANTHER PTHR11649:SF37 261 677 1.9E-240 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APQ13_RS05130 b31ec1724bacf17b012e464c697e78ea 716 SUPERFAMILY SSF52540 3 173 1.04E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 PANTHER PTHR11776:SF0 1 168 1.4E-75 T 25-04-2016 APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 SUPERFAMILY SSF53271 2 167 1.85E-49 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 Pfam PF00156 Phosphoribosyl transferase domain 34 166 2.2E-18 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 169 1.2E-67 T 25-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 PANTHER PTHR11776 1 168 1.4E-75 T 25-04-2016 APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 37.589 T 25-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APQ13_RS01170 4cdde24c61b929092b3bb2654c7d9f5c 172 Gene3D G3DSA:3.40.50.2020 1 170 1.1E-64 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like APQ13_RS01500 c1decee68878b244f4497b4b887cc980 158 PANTHER PTHR23091 1 146 1.1E-20 T 25-04-2016 APQ13_RS01500 c1decee68878b244f4497b4b887cc980 158 SUPERFAMILY SSF55729 1 153 6.81E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS01500 c1decee68878b244f4497b4b887cc980 158 Gene3D G3DSA:3.40.630.30 1 157 1.6E-34 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS01500 c1decee68878b244f4497b4b887cc980 158 Pfam PF00583 Acetyltransferase (GNAT) family 66 147 1.8E-13 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS06930 bcf0505cfcf08347f82e2432e3eb6e71 64 Pfam PF01381 Helix-turn-helix 6 60 9.8E-18 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS06930 bcf0505cfcf08347f82e2432e3eb6e71 64 Gene3D G3DSA:1.10.260.40 5 64 2.5E-23 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS06930 bcf0505cfcf08347f82e2432e3eb6e71 64 SMART SM00530 5 60 1.1E-16 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS06930 bcf0505cfcf08347f82e2432e3eb6e71 64 SUPERFAMILY SSF47413 5 63 8.04E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS06930 bcf0505cfcf08347f82e2432e3eb6e71 64 PANTHER PTHR10245:SF56 1 64 1.4E-29 T 25-04-2016 APQ13_RS06930 bcf0505cfcf08347f82e2432e3eb6e71 64 PANTHER PTHR10245 1 64 1.4E-29 T 25-04-2016 APQ13_RS09280 a2cce706b7393e9cf850b92349b433b4 183 Gene3D G3DSA:3.40.50.850 2 181 4.4E-49 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APQ13_RS09280 a2cce706b7393e9cf850b92349b433b4 183 SUPERFAMILY SSF52499 2 181 1.22E-51 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APQ13_RS09280 a2cce706b7393e9cf850b92349b433b4 183 PANTHER PTHR11080 1 182 3.4E-45 T 25-04-2016 APQ13_RS09280 a2cce706b7393e9cf850b92349b433b4 183 Pfam PF00857 Isochorismatase family 4 178 1.3E-36 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APQ13_RS05185 8fd17c547a42cca848feec348fc21d83 271 PANTHER PTHR35794 1 228 5.6E-57 T 25-04-2016 APQ13_RS05185 8fd17c547a42cca848feec348fc21d83 271 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 1.3E-11 T 25-04-2016 IPR019933 DivIVA domain APQ13_RS05185 8fd17c547a42cca848feec348fc21d83 271 Pfam PF05103 DivIVA protein 3 143 1.4E-40 T 25-04-2016 IPR007793 DivIVA family APQ13_RS05185 8fd17c547a42cca848feec348fc21d83 271 PANTHER PTHR35794:SF2 1 228 5.6E-57 T 25-04-2016 APQ13_RS00410 ad6ae646dea766450868617b7eb33a48 210 Gene3D G3DSA:3.30.240.20 156 210 4.3E-16 T 25-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain APQ13_RS00410 ad6ae646dea766450868617b7eb33a48 210 PANTHER PTHR34582:SF6 3 210 2.7E-63 T 25-04-2016 APQ13_RS00410 ad6ae646dea766450868617b7eb33a48 210 PANTHER PTHR34582 3 210 2.7E-63 T 25-04-2016 APQ13_RS00410 ad6ae646dea766450868617b7eb33a48 210 Pfam PF04239 Protein of unknown function (DUF421) 89 190 2.3E-30 T 25-04-2016 IPR007353 Protein of unknown function DUF421 APQ13_RS00410 ad6ae646dea766450868617b7eb33a48 210 Gene3D G3DSA:3.30.240.20 81 155 2.6E-22 T 25-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain APQ13_RS01890 b0bebaedc56ed82b3fd36b7a65fd4513 225 Pfam PF09335 SNARE associated Golgi protein 81 193 5.7E-12 T 25-04-2016 IPR032816 SNARE associated Golgi protein APQ13_RS04235 e0165792a3456ecbb6b83b289579c772 394 Gene3D G3DSA:3.10.350.10 71 115 1.7E-10 T 25-04-2016 IPR018392 LysM domain APQ13_RS04235 e0165792a3456ecbb6b83b289579c772 394 SMART SM00257 72 116 8.2E-8 T 25-04-2016 IPR018392 LysM domain APQ13_RS04235 e0165792a3456ecbb6b83b289579c772 394 SUPERFAMILY SSF54106 72 115 3.66E-8 T 25-04-2016 IPR018392 LysM domain APQ13_RS04235 e0165792a3456ecbb6b83b289579c772 394 Pfam PF01476 LysM domain 73 115 4.6E-7 T 25-04-2016 IPR018392 LysM domain APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 PANTHER PTHR24221:SF138 2 175 2.2E-57 T 25-04-2016 APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 SMART SM00382 1 175 1.5E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 PANTHER PTHR24221 2 175 2.2E-57 T 25-04-2016 APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 ProSitePatterns PS00211 ABC transporters family signature. 103 117 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 SUPERFAMILY SSF52540 2 176 4.26E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 Gene3D G3DSA:3.40.50.300 1 177 1.6E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07445 fef9be7f0800be3ba33d71bf900062a8 193 Pfam PF00005 ABC transporter 1 131 3.3E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 283 2.2E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 SUPERFAMILY SSF47384 213 284 1.8E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 PANTHER PTHR24423 214 432 9.3E-29 T 25-04-2016 APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 SMART SM00387 334 435 5.4E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 Gene3D G3DSA:1.10.287.130 222 273 9.9E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 Gene3D G3DSA:3.30.565.10 274 433 1.5E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 432 2.4E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 SUPERFAMILY SSF55874 297 433 6.94E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS02590 59e049b89189926a9041b39b506fd490 435 SMART SM00388 228 290 7.1E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APQ13_RS03975 d1b7d35108a0a91ed34f2d1067e83f0b 844 Gene3D G3DSA:3.40.720.10 642 782 3.3E-4 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APQ13_RS03975 d1b7d35108a0a91ed34f2d1067e83f0b 844 Pfam PF00884 Sulfatase 501 785 1.1E-43 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APQ13_RS03975 d1b7d35108a0a91ed34f2d1067e83f0b 844 SUPERFAMILY SSF53649 503 739 4.8E-6 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APQ13_RS01885 85a097a4bb184630b48a5c36da5f371d 460 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 5 451 4.2E-229 T 25-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APQ13_RS01885 85a097a4bb184630b48a5c36da5f371d 460 PANTHER PTHR30508 1 460 1.2E-217 T 25-04-2016 APQ13_RS01885 85a097a4bb184630b48a5c36da5f371d 460 Pfam PF01458 Uncharacterized protein family (UPF0051) 206 431 6.5E-70 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APQ13_RS01885 85a097a4bb184630b48a5c36da5f371d 460 SUPERFAMILY SSF101960 27 457 8.37E-135 T 25-04-2016 APQ13_RS01885 85a097a4bb184630b48a5c36da5f371d 460 PANTHER PTHR30508:SF1 1 460 1.2E-217 T 25-04-2016 APQ13_RS00240 53e71a048a71123087b97a60adde471e 544 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 378 524 1.6E-22 T 25-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APQ13_RS00240 53e71a048a71123087b97a60adde471e 544 PANTHER PTHR30250 4 541 1.5E-148 T 25-04-2016 APQ13_RS00240 53e71a048a71123087b97a60adde471e 544 PANTHER PTHR30250:SF6 4 541 1.5E-148 T 25-04-2016 APQ13_RS00240 53e71a048a71123087b97a60adde471e 544 PIRSF PIRSF038958 8 541 1.9E-72 T 25-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type APQ13_RS00240 53e71a048a71123087b97a60adde471e 544 Pfam PF01943 Polysaccharide biosynthesis protein 15 324 2.8E-32 T 25-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APQ13_RS08690 1b00ef74aa6846753e54cb67bb51750f 102 Pfam PF15513 Domain of unknown function (DUF4651) 34 94 2.4E-29 T 25-04-2016 IPR028105 Protein of unknown function DUF4651 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 Gene3D G3DSA:1.20.1250.20 264 444 4.1E-17 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.7E-9 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 3.7E-9 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.7E-9 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 3.7E-9 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.7E-9 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 417 1.3E-69 T 25-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 Pfam PF07690 Major Facilitator Superfamily 22 408 1.1E-39 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 SUPERFAMILY SSF103473 247 443 3.01E-52 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 SUPERFAMILY SSF103473 9 201 3.01E-52 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 PANTHER PTHR23501 18 444 3.9E-76 T 25-04-2016 APQ13_RS04365 f0c30c6a73ded3c18fc68008b1a5d6a0 454 Gene3D G3DSA:1.20.1250.20 16 200 3.9E-23 T 25-04-2016 APQ13_RS01640 c3b69717d63b3e0c33bb0ffee9cac072 191 SUPERFAMILY SSF46689 5 69 4.19E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS01640 c3b69717d63b3e0c33bb0ffee9cac072 191 Gene3D G3DSA:1.10.357.10 5 164 1.1E-11 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS06665 9897c38628a4d640ea2f5d7484a62d62 281 PANTHER PTHR30622 2 281 1.7E-129 T 25-04-2016 APQ13_RS06665 9897c38628a4d640ea2f5d7484a62d62 281 Pfam PF02673 Bacitracin resistance protein BacA 9 269 2.7E-77 T 25-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APQ13_RS06665 9897c38628a4d640ea2f5d7484a62d62 281 PANTHER PTHR30622:SF5 2 281 1.7E-129 T 25-04-2016 APQ13_RS06665 9897c38628a4d640ea2f5d7484a62d62 281 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 274 17.528 T 25-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APQ13_RS09490 464acb2dfc3a9108fe9a7feccb0455ff 81 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 54 5.2E-19 T 25-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ APQ13_RS09490 464acb2dfc3a9108fe9a7feccb0455ff 81 Pfam PF04221 RelB antitoxin 1 71 8.4E-16 T 25-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ APQ13_RS04910 0ea6e19c5208f75922437ec4c5407032 250 Gene3D G3DSA:3.40.1130.10 28 197 6.3E-19 T 25-04-2016 APQ13_RS04910 0ea6e19c5208f75922437ec4c5407032 250 SMART SM00563 36 146 1.7E-22 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APQ13_RS04910 0ea6e19c5208f75922437ec4c5407032 250 PANTHER PTHR10434 2 206 8.0E-52 T 25-04-2016 APQ13_RS04910 0ea6e19c5208f75922437ec4c5407032 250 PANTHER PTHR10434:SF21 2 206 8.0E-52 T 25-04-2016 APQ13_RS04910 0ea6e19c5208f75922437ec4c5407032 250 SUPERFAMILY SSF69593 2 199 1.12E-53 T 25-04-2016 APQ13_RS04910 0ea6e19c5208f75922437ec4c5407032 250 Pfam PF01553 Acyltransferase 27 143 5.8E-18 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APQ13_RS01560 bd92daf69095d097ee34c6171d68e2b2 261 SUPERFAMILY SSF55821 10 198 6.18E-21 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APQ13_RS01560 bd92daf69095d097ee34c6171d68e2b2 261 Gene3D G3DSA:3.90.870.10 22 189 6.0E-21 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APQ13_RS01560 bd92daf69095d097ee34c6171d68e2b2 261 Pfam PF01300 Telomere recombination 22 193 2.0E-9 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 APQ13_RS02755 e58fed07c3f3c834fedace64b860935d 323 Pfam PF06207 Protein of unknown function (DUF1002) 46 274 7.9E-60 T 25-04-2016 IPR009343 Protein of unknown function DUF1002 APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 46 234 1.8E-31 T 25-04-2016 APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 PANTHER PTHR24321:SF6 91 235 2.3E-15 T 25-04-2016 APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 PANTHER PTHR24321 91 235 2.3E-15 T 25-04-2016 APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 3.19E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 3.19E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 3.19E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.19E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 SUPERFAMILY SSF51735 43 235 3.21E-37 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06035 5ad0c39feda7cb153ba1733d18db8cb8 236 Gene3D G3DSA:3.40.50.720 45 235 1.7E-37 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05310 29771720ee33b9db027f5ac638d7d06a 245 Pfam PF06161 Protein of unknown function (DUF975) 1 144 2.5E-9 T 25-04-2016 IPR010380 Protein of unknown function DUF975 APQ13_RS05310 29771720ee33b9db027f5ac638d7d06a 245 Pfam PF06161 Protein of unknown function (DUF975) 134 224 5.9E-33 T 25-04-2016 IPR010380 Protein of unknown function DUF975 APQ13_RS05310 29771720ee33b9db027f5ac638d7d06a 245 PANTHER PTHR40076:SF1 2 245 1.2E-41 T 25-04-2016 APQ13_RS05310 29771720ee33b9db027f5ac638d7d06a 245 PANTHER PTHR40076 2 245 1.2E-41 T 25-04-2016 APQ13_RS00655 bccd8a3723df1f89c82ae814dfcd2061 213 Gene3D G3DSA:3.40.50.300 3 110 1.2E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS00655 bccd8a3723df1f89c82ae814dfcd2061 213 SUPERFAMILY SSF52540 3 198 1.87E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS01945 512975d860f58b826709188fcc532e07 408 PANTHER PTHR30474 9 403 5.8E-131 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APQ13_RS01945 512975d860f58b826709188fcc532e07 408 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 25-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APQ13_RS01945 512975d860f58b826709188fcc532e07 408 PANTHER PTHR30474:SF1 9 403 5.8E-131 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APQ13_RS01945 512975d860f58b826709188fcc532e07 408 Pfam PF01098 Cell cycle protein 16 386 1.5E-77 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APQ13_RS06420 7db3a97321a3ef9a98f8c44918638cee 246 SUPERFAMILY SSF46785 1 84 5.99E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06420 7db3a97321a3ef9a98f8c44918638cee 246 Gene3D G3DSA:1.10.10.10 1 85 9.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06420 7db3a97321a3ef9a98f8c44918638cee 246 PANTHER PTHR30126 1 84 3.9E-21 T 25-04-2016 APQ13_RS06420 7db3a97321a3ef9a98f8c44918638cee 246 PANTHER PTHR30126:SF31 1 84 3.9E-21 T 25-04-2016 APQ13_RS06420 7db3a97321a3ef9a98f8c44918638cee 246 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.6E-13 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APQ13_RS04895 35a64e355da398175abdc7ddafb7d1ce 208 PANTHER PTHR34980:SF2 1 206 2.7E-14 T 25-04-2016 APQ13_RS04895 35a64e355da398175abdc7ddafb7d1ce 208 Pfam PF05656 Protein of unknown function (DUF805) 12 156 4.9E-15 T 25-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APQ13_RS04895 35a64e355da398175abdc7ddafb7d1ce 208 PANTHER PTHR34980 1 206 2.7E-14 T 25-04-2016 APQ13_RS07060 8ea5250b9fbd9e10c275f3ba14dfac44 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.2E-9 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS07060 8ea5250b9fbd9e10c275f3ba14dfac44 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.2E-9 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS07060 8ea5250b9fbd9e10c275f3ba14dfac44 207 Gene3D G3DSA:1.10.357.10 7 197 1.4E-26 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS07060 8ea5250b9fbd9e10c275f3ba14dfac44 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.0E-14 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS07060 8ea5250b9fbd9e10c275f3ba14dfac44 207 SUPERFAMILY SSF46689 7 87 2.44E-19 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS07060 8ea5250b9fbd9e10c275f3ba14dfac44 207 PANTHER PTHR30055 6 92 1.9E-18 T 25-04-2016 APQ13_RS00440 776032c9a952c95a1ad00f156d4cb510 183 SUPERFAMILY SSF55811 6 179 1.9E-42 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS00440 776032c9a952c95a1ad00f156d4cb510 183 PANTHER PTHR11839 6 179 1.5E-53 T 25-04-2016 APQ13_RS00440 776032c9a952c95a1ad00f156d4cb510 183 PANTHER PTHR11839:SF9 6 179 1.5E-53 T 25-04-2016 APQ13_RS00440 776032c9a952c95a1ad00f156d4cb510 183 Pfam PF00293 NUDIX domain 42 155 9.1E-13 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APQ13_RS00440 776032c9a952c95a1ad00f156d4cb510 183 Gene3D G3DSA:3.90.79.10 4 180 4.6E-51 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APQ13_RS02935 4ad25c70ff54b5ba878485b4bced28ab 163 PANTHER PTHR23091 1 163 1.7E-24 T 25-04-2016 APQ13_RS02935 4ad25c70ff54b5ba878485b4bced28ab 163 SUPERFAMILY SSF55729 1 161 1.17E-29 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS02935 4ad25c70ff54b5ba878485b4bced28ab 163 PANTHER PTHR23091:SF183 1 163 1.7E-24 T 25-04-2016 APQ13_RS02935 4ad25c70ff54b5ba878485b4bced28ab 163 Gene3D G3DSA:3.40.630.30 1 161 2.2E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS02935 4ad25c70ff54b5ba878485b4bced28ab 163 Pfam PF13420 Acetyltransferase (GNAT) domain 3 156 1.4E-41 T 25-04-2016 APQ13_RS07815 cb6c827c45a6a6bd2fd1d51d7068604a 184 PANTHER PTHR30055:SF55 8 183 4.7E-30 T 25-04-2016 APQ13_RS07815 cb6c827c45a6a6bd2fd1d51d7068604a 184 SUPERFAMILY SSF46689 4 67 3.17E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS07815 cb6c827c45a6a6bd2fd1d51d7068604a 184 Gene3D G3DSA:1.10.357.10 5 183 3.2E-17 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS07815 cb6c827c45a6a6bd2fd1d51d7068604a 184 PANTHER PTHR30055 8 183 4.7E-30 T 25-04-2016 APQ13_RS07815 cb6c827c45a6a6bd2fd1d51d7068604a 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 56 8.5E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS00390 71dd028417f881f27c937dc7903a0b95 212 Pfam PF07853 Protein of unknown function (DUF1648) 13 61 3.1E-17 T 25-04-2016 IPR012867 Domain of unknown function DUF1648 APQ13_RS00390 71dd028417f881f27c937dc7903a0b95 212 PIRSF PIRSF038959 1 212 1.2E-38 T 25-04-2016 IPR026272 Immunity protein SdpI APQ13_RS00390 71dd028417f881f27c937dc7903a0b95 212 PANTHER PTHR37810:SF1 1 212 3.4E-21 T 25-04-2016 APQ13_RS00390 71dd028417f881f27c937dc7903a0b95 212 Pfam PF13630 SdpI/YhfL protein family 135 203 5.4E-24 T 25-04-2016 IPR025962 SdpI/YhfL protein family APQ13_RS00390 71dd028417f881f27c937dc7903a0b95 212 PANTHER PTHR37810 1 212 3.4E-21 T 25-04-2016 APQ13_RS04080 e9e574af2925be999471f2e7b3176bfa 305 Pfam PF02517 CAAX protease self-immunity 146 236 3.6E-16 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 APQ13_RS04080 e9e574af2925be999471f2e7b3176bfa 305 PANTHER PTHR39430 52 299 1.5E-42 T 25-04-2016 APQ13_RS08840 96bff40c953cc4123a78de3071f91ec6 229 SUPERFAMILY SSF161098 21 216 6.41E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS08840 96bff40c953cc4123a78de3071f91ec6 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 53 227 7.6E-15 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS08840 96bff40c953cc4123a78de3071f91ec6 229 PANTHER PTHR30450 23 229 4.1E-73 T 25-04-2016 APQ13_RS08840 96bff40c953cc4123a78de3071f91ec6 229 Gene3D G3DSA:1.10.3720.10 19 227 1.6E-31 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS08840 96bff40c953cc4123a78de3071f91ec6 229 PANTHER PTHR30450:SF1 23 229 4.1E-73 T 25-04-2016 APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 PANTHER PTHR10804 1 101 4.0E-159 T 25-04-2016 APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 PANTHER PTHR10804 128 284 4.0E-159 T 25-04-2016 APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 SUPERFAMILY SSF55920 1 101 6.75E-63 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 SUPERFAMILY SSF55920 129 279 6.75E-63 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 PANTHER PTHR10804:SF108 1 101 4.0E-159 T 25-04-2016 APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 PANTHER PTHR10804:SF108 128 284 4.0E-159 T 25-04-2016 APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 Pfam PF00557 Metallopeptidase family M24 131 271 3.2E-28 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 Pfam PF00557 Metallopeptidase family M24 11 100 6.1E-8 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 Hamap MF_01974 Methionine aminopeptidase [map]. 2 280 35.27 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 Gene3D G3DSA:3.90.230.10 1 280 1.7E-77 T 25-04-2016 IPR000994 Peptidase M24, structural domain APQ13_RS00790 fc74871719564ee46ea5f40d895525fa 286 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 130 279 8.1E-52 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APQ13_RS06505 86d83f8d1f558ec3239147adad8a2950 72 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 53 8.9E-8 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 25-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 PANTHER PTHR12903 1 101 1.2E-39 T 25-04-2016 APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 94 19.599 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 SUPERFAMILY SSF50104 2 99 1.81E-29 T 25-04-2016 IPR008991 Translation protein SH3-like domain APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 99 8.9E-25 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 Gene3D G3DSA:2.30.30.30 1 89 2.8E-20 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 SMART SM00739 2 29 2.3E-5 T 25-04-2016 IPR005824 KOW APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 Pfam PF00467 KOW motif 5 36 3.3E-6 T 25-04-2016 IPR005824 KOW APQ13_RS08455 1c55eaafa3d8b9e7d6583305d6c76401 101 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 99 4.7E-33 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 SUPERFAMILY SSF55129 1 59 1.83E-19 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.2E-27 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 PIRSF PIRSF002211 1 60 1.2E-27 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.852 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 PANTHER PTHR15892 1 60 1.5E-24 T 25-04-2016 APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.9E-18 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 Gene3D G3DSA:3.30.1390.20 1 59 3.0E-29 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APQ13_RS08490 ef42029d26b2837e3674b3e72922216c 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 25-04-2016 IPR018038 Ribosomal protein L30, conserved site APQ13_RS03190 31a9baf10b841731daf73381dbd63556 667 PANTHER PTHR30489:SF14 1 658 2.8E-55 T 25-04-2016 APQ13_RS03190 31a9baf10b841731daf73381dbd63556 667 PIRSF PIRSF018968 1 667 9.8E-70 T 25-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 APQ13_RS03190 31a9baf10b841731daf73381dbd63556 667 PANTHER PTHR30489 1 658 2.8E-55 T 25-04-2016 APQ13_RS03190 31a9baf10b841731daf73381dbd63556 667 Pfam PF02687 FtsX-like permease family 58 175 2.0E-11 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS03190 31a9baf10b841731daf73381dbd63556 667 Pfam PF02687 FtsX-like permease family 549 658 4.7E-6 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 PANTHER PTHR11067:SF9 121 318 1.7E-70 T 25-04-2016 APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 Pfam PF01725 Ham1 family 128 316 1.6E-49 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 SUPERFAMILY SSF52972 126 318 5.76E-64 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 Gene3D G3DSA:3.90.950.10 117 319 8.5E-74 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 127 318 7.5E-56 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 126 320 48.514 T 25-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APQ13_RS00055 93fd9585a6215a93be61a468b918a564 325 PANTHER PTHR11067 121 318 1.7E-70 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APQ13_RS02520 b6a53702400168012df3c918ffd79ff0 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 6.5E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02520 b6a53702400168012df3c918ffd79ff0 203 SUPERFAMILY SSF46689 5 76 8.48E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS02520 b6a53702400168012df3c918ffd79ff0 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.4E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02520 b6a53702400168012df3c918ffd79ff0 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.4E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02520 b6a53702400168012df3c918ffd79ff0 203 Gene3D G3DSA:1.10.357.10 11 193 3.9E-25 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 Gene3D G3DSA:3.40.710.10 8 291 8.7E-87 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 SUPERFAMILY SSF56601 4 292 8.07E-67 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 PANTHER PTHR21581 4 375 5.0E-105 T 25-04-2016 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 SUPERFAMILY SSF69189 286 405 9.61E-15 T 25-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 PANTHER PTHR21581:SF11 4 375 5.0E-105 T 25-04-2016 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 Gene3D G3DSA:2.60.410.10 297 394 6.2E-24 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 SMART SM00936 294 394 4.1E-18 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 394 2.2E-16 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 20 269 6.3E-88 T 25-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 3.8E-13 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 3.8E-13 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APQ13_RS06620 aff14f4e17e39ae6170eb8d670e71930 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 3.8E-13 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APQ13_RS00415 aaab1e7f04bec4ecbb80bb543fd7d852 66 SUPERFAMILY SSF69047 5 57 4.97E-9 T 25-04-2016 IPR008462 CsbD-like APQ13_RS00415 aaab1e7f04bec4ecbb80bb543fd7d852 66 Pfam PF05532 CsbD-like 3 52 6.6E-11 T 25-04-2016 IPR008462 CsbD-like APQ13_RS00415 aaab1e7f04bec4ecbb80bb543fd7d852 66 Gene3D G3DSA:1.10.1470.10 3 62 9.3E-15 T 25-04-2016 IPR008462 CsbD-like APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 Pfam PF01487 Type I 3-dehydroquinase 5 218 4.6E-54 T 25-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 PANTHER PTHR21089:SF5 1 225 3.0E-76 T 25-04-2016 APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 PANTHER PTHR21089 1 225 3.0E-76 T 25-04-2016 APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 Gene3D G3DSA:3.20.20.70 1 223 2.9E-70 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 SUPERFAMILY SSF51569 1 223 2.93E-63 T 25-04-2016 APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 2 218 1.0E-49 T 25-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APQ13_RS04210 7fb9ff2fc162139bad8e480f42833a34 225 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 2 222 36.954 T 25-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APQ13_RS06415 9044d1c61966e9bceb1504d4e8aa41c1 180 Pfam PF16157 Domain of unknown function (DUF4865) 1 172 1.2E-59 T 25-04-2016 IPR032349 Protein of unknown function DUF4865 APQ13_RS00140 35578915d5174f4dcaa710ea092f7a53 231 Pfam PF04172 LrgB-like family 15 227 7.4E-64 T 25-04-2016 IPR007300 CidB/LrgB family APQ13_RS00140 35578915d5174f4dcaa710ea092f7a53 231 PANTHER PTHR30249 1 230 1.7E-62 T 25-04-2016 APQ13_RS00560 b90250ff06047f458fa55cbb0ecab3b9 78 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 4.6E-17 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APQ13_RS00560 b90250ff06047f458fa55cbb0ecab3b9 78 Pfam PF03840 Preprotein translocase SecG subunit 4 74 5.4E-14 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APQ13_RS01865 417e1e2b3f833c44f05430200613e3d3 310 SUPERFAMILY SSF64182 14 308 4.58E-74 T 25-04-2016 APQ13_RS01865 417e1e2b3f833c44f05430200613e3d3 310 Gene3D G3DSA:3.90.1640.10 15 189 3.0E-33 T 25-04-2016 APQ13_RS01865 417e1e2b3f833c44f05430200613e3d3 310 Pfam PF01368 DHH family 17 152 2.5E-14 T 25-04-2016 IPR001667 DDH domain APQ13_RS01865 417e1e2b3f833c44f05430200613e3d3 310 Pfam PF02272 DHHA1 domain 250 295 1.7E-5 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APQ13_RS04220 ed12b5ae818e65d387beb8da02ea9325 717 PANTHER PTHR10342 226 587 3.6E-103 T 25-04-2016 APQ13_RS04220 ed12b5ae818e65d387beb8da02ea9325 717 PIRSF PIRSF005091 1 646 6.8E-175 T 25-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 APQ13_RS04220 ed12b5ae818e65d387beb8da02ea9325 717 Gene3D G3DSA:3.40.720.10 254 569 2.1E-34 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APQ13_RS04220 ed12b5ae818e65d387beb8da02ea9325 717 PANTHER PTHR10342:SF214 226 587 3.6E-103 T 25-04-2016 APQ13_RS04220 ed12b5ae818e65d387beb8da02ea9325 717 SUPERFAMILY SSF53649 252 659 7.2E-70 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APQ13_RS04220 ed12b5ae818e65d387beb8da02ea9325 717 Pfam PF00884 Sulfatase 254 556 7.7E-32 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APQ13_RS08725 4e628529691ce80c9f2a60cd361e7730 440 Gene3D G3DSA:3.30.565.10 348 434 2.2E-5 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS08725 4e628529691ce80c9f2a60cd361e7730 440 PANTHER PTHR24421 17 434 4.2E-41 T 25-04-2016 APQ13_RS08725 4e628529691ce80c9f2a60cd361e7730 440 SUPERFAMILY SSF55874 317 433 6.74E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APQ13_RS08725 4e628529691ce80c9f2a60cd361e7730 440 PANTHER PTHR24421:SF15 17 434 4.2E-41 T 25-04-2016 APQ13_RS08725 4e628529691ce80c9f2a60cd361e7730 440 Pfam PF07730 Histidine kinase 245 312 1.0E-18 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APQ13_RS05395 f229af5b4d6fb272f99944986c4a9727 99 PANTHER PTHR18895 10 99 6.9E-25 T 25-04-2016 APQ13_RS05395 f229af5b4d6fb272f99944986c4a9727 99 SUPERFAMILY SSF53335 16 96 3.45E-7 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05395 f229af5b4d6fb272f99944986c4a9727 99 PANTHER PTHR18895:SF75 10 99 6.9E-25 T 25-04-2016 APQ13_RS05395 f229af5b4d6fb272f99944986c4a9727 99 Gene3D G3DSA:3.40.50.150 34 97 2.3E-11 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 269 284 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 110 129 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 214 229 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 159 178 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 182 200 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 6.8E-61 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 SUPERFAMILY SSF53633 4 313 8.9E-84 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 TIGRFAM TIGR00746 arcC: carbamate kinase 4 314 6.9E-122 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PIRSF PIRSF000723 2 315 1.8E-114 T 25-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PANTHER PTHR30409 1 316 3.2E-138 T 25-04-2016 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 PANTHER PTHR30409:SF1 1 316 3.2E-138 T 25-04-2016 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 Gene3D G3DSA:3.40.1160.10 3 314 2.9E-105 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS06565 da6da7c9a30ce7bb8691f28764cc90c6 316 Pfam PF00696 Amino acid kinase family 5 288 8.5E-30 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APQ13_RS07340 71db1a3dddf51250e757e8ba30ead080 138 SUPERFAMILY SSF55961 10 131 5.5E-10 T 25-04-2016 APQ13_RS05960 cd8e48d48ca31f41aab32b61fbbd57ef 171 Pfam PF04394 Protein of unknown function, DUF536 104 146 4.5E-18 T 25-04-2016 IPR007489 Domain of unknown function DUF536 APQ13_RS05960 cd8e48d48ca31f41aab32b61fbbd57ef 171 Gene3D G3DSA:1.10.10.10 5 51 4.1E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS01580 56d93d6afe4a92db09f5a19a988cc619 80 Pfam PF13518 Helix-turn-helix domain 12 62 2.1E-10 T 25-04-2016 APQ13_RS01580 56d93d6afe4a92db09f5a19a988cc619 80 Gene3D G3DSA:1.10.10.10 5 60 5.8E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS01580 56d93d6afe4a92db09f5a19a988cc619 80 SUPERFAMILY SSF48295 1 62 2.46E-14 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APQ13_RS04030 a725f1a26308821cd444402cb51e4642 506 SUPERFAMILY SSF51126 229 503 6.28E-17 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor APQ13_RS07185 b39ca3dc2e2ad0e5f2c0782532f88728 194 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 83 1.2E-8 T 25-04-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 APQ13_RS07185 b39ca3dc2e2ad0e5f2c0782532f88728 194 PANTHER PTHR41322 2 194 1.2E-44 T 25-04-2016 APQ13_RS07185 b39ca3dc2e2ad0e5f2c0782532f88728 194 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 189 16.093 T 25-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 APQ13_RS07185 b39ca3dc2e2ad0e5f2c0782532f88728 194 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 94 1.4E-29 T 25-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 APQ13_RS01765 287868413823a6d4293faf489cf7f13a 250 SUPERFAMILY SSF53474 3 245 6.7E-21 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01765 287868413823a6d4293faf489cf7f13a 250 Gene3D G3DSA:3.40.50.1820 2 246 1.0E-20 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01765 287868413823a6d4293faf489cf7f13a 250 Pfam PF00756 Putative esterase 81 239 2.5E-12 T 25-04-2016 IPR000801 Putative esterase APQ13_RS03505 55dfde61f24a423aa8f35f18cbdf7dbe 332 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 5 327 1.7E-57 T 25-04-2016 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 APQ13_RS03505 55dfde61f24a423aa8f35f18cbdf7dbe 332 SUPERFAMILY SSF54211 4 195 6.98E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APQ13_RS03505 55dfde61f24a423aa8f35f18cbdf7dbe 332 Pfam PF00288 GHMP kinases N terminal domain 103 159 1.2E-7 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APQ13_RS03505 55dfde61f24a423aa8f35f18cbdf7dbe 332 SUPERFAMILY SSF55060 200 329 1.15E-29 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03505 55dfde61f24a423aa8f35f18cbdf7dbe 332 Gene3D G3DSA:3.30.70.890 202 330 1.2E-36 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain APQ13_RS03505 55dfde61f24a423aa8f35f18cbdf7dbe 332 Gene3D G3DSA:3.30.230.10 5 193 2.6E-65 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APQ13_RS06525 c814f3e4d062bb9dc58a8d4e8e4feeae 236 SMART SM01007 8 198 1.2E-72 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal APQ13_RS06525 c814f3e4d062bb9dc58a8d4e8e4feeae 236 PANTHER PTHR22789:SF8 1 231 7.2E-132 T 25-04-2016 APQ13_RS06525 c814f3e4d062bb9dc58a8d4e8e4feeae 236 SUPERFAMILY SSF53639 5 223 3.53E-71 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal APQ13_RS06525 c814f3e4d062bb9dc58a8d4e8e4feeae 236 Gene3D G3DSA:3.40.225.10 5 231 2.6E-75 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal APQ13_RS06525 c814f3e4d062bb9dc58a8d4e8e4feeae 236 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 197 7.5E-46 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal APQ13_RS06525 c814f3e4d062bb9dc58a8d4e8e4feeae 236 PANTHER PTHR22789 1 231 7.2E-132 T 25-04-2016 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 4.8E-40 T 25-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 7.8E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 Gene3D G3DSA:3.40.50.720 139 263 6.8E-54 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 9.5E-71 T 25-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 PANTHER PTHR10025 1 280 4.1E-154 T 25-04-2016 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 SUPERFAMILY SSF53223 1 121 5.37E-41 T 25-04-2016 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 SUPERFAMILY SSF51735 122 280 7.44E-52 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 38.812 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APQ13_RS05120 0128faa7d2ab5a41360da5e700f5054f 284 Gene3D G3DSA:3.40.192.10 6 138 3.3E-50 T 25-04-2016 APQ13_RS01100 173a5fe51c4a771ede867208ed7b5696 180 Pfam PF13302 Acetyltransferase (GNAT) domain 51 151 2.7E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS01100 173a5fe51c4a771ede867208ed7b5696 180 SUPERFAMILY SSF55729 2 157 2.61E-18 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS01100 173a5fe51c4a771ede867208ed7b5696 180 Gene3D G3DSA:3.40.630.30 2 158 6.9E-18 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS01100 173a5fe51c4a771ede867208ed7b5696 180 PANTHER PTHR39173 3 175 4.8E-36 T 25-04-2016 APQ13_RS06735 f0b46be6b63a20c2225780de42df83a9 121 PANTHER PTHR34297:SF2 1 121 6.1E-48 T 25-04-2016 APQ13_RS06735 f0b46be6b63a20c2225780de42df83a9 121 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 3.0E-31 T 25-04-2016 IPR005531 Alkaline shock protein Asp23 APQ13_RS06735 f0b46be6b63a20c2225780de42df83a9 121 PANTHER PTHR34297 1 121 6.1E-48 T 25-04-2016 APQ13_RS08750 427f1aafaec52a02d0e5b64da402ccdd 283 Pfam PF03609 PTS system sorbose-specific iic component 5 254 2.3E-65 T 25-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APQ13_RS05790 650cdca1baa92abf2db6878e103ddd09 163 Pfam PF10688 Bacterial inner membrane protein 3 158 5.8E-24 T 25-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV APQ13_RS08620 9a4364f6b9be1482416cf3322dd932cd 313 Gene3D G3DSA:3.30.450.90 2 108 4.5E-20 T 25-04-2016 APQ13_RS08620 9a4364f6b9be1482416cf3322dd932cd 313 PANTHER PTHR30258 9 267 3.3E-71 T 25-04-2016 APQ13_RS08620 9a4364f6b9be1482416cf3322dd932cd 313 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 197 211 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APQ13_RS08620 9a4364f6b9be1482416cf3322dd932cd 313 SUPERFAMILY SSF52540 3 268 3.13E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08620 9a4364f6b9be1482416cf3322dd932cd 313 Gene3D G3DSA:3.40.50.300 130 267 9.2E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08620 9a4364f6b9be1482416cf3322dd932cd 313 Pfam PF00437 Type II/IV secretion system protein 9 266 4.6E-42 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APQ13_RS06385 82aa82c9a901440ae01ab633ebf1410a 187 Pfam PF06042 Nucleotidyltransferase 22 182 8.4E-57 T 25-04-2016 IPR009267 Putative nucleotidyltransferase APQ13_RS06385 82aa82c9a901440ae01ab633ebf1410a 187 PANTHER PTHR39166 1 186 1.6E-53 T 25-04-2016 APQ13_RS05340 3959ea2b106d6bbea75f47ccb3740f99 178 Pfam PF04892 VanZ like family 24 160 2.9E-18 T 25-04-2016 IPR006976 VanZ-like APQ13_RS05340 3959ea2b106d6bbea75f47ccb3740f99 178 PANTHER PTHR36834 21 155 2.9E-21 T 25-04-2016 APQ13_RS05340 3959ea2b106d6bbea75f47ccb3740f99 178 PANTHER PTHR36834:SF1 21 155 2.9E-21 T 25-04-2016 APQ13_RS05975 c99e7485cecea7f020472930ae285bdd 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 1.4E-22 T 25-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 SUPERFAMILY SSF52540 3 239 3.99E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 PANTHER PTHR24220 4 246 5.2E-98 T 25-04-2016 APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 Pfam PF00005 ABC transporter 24 174 4.8E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 1.1E-120 T 25-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 SMART SM00382 32 244 1.8E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 Gene3D G3DSA:3.40.50.300 3 235 1.8E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS07755 82f7c75d07aef3817b54e674eb56ce7c 280 PANTHER PTHR24220:SF66 4 246 5.2E-98 T 25-04-2016 APQ13_RS03910 1d9136cd267c16a978ac00a6573874db 177 Pfam PF13508 Acetyltransferase (GNAT) domain 46 133 8.4E-8 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS03910 1d9136cd267c16a978ac00a6573874db 177 Gene3D G3DSA:3.40.630.30 12 149 1.1E-30 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS03910 1d9136cd267c16a978ac00a6573874db 177 SUPERFAMILY SSF55729 16 145 4.8E-14 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS03850 0c9a5f7aabbeb8726d9e8fa66a9ae5a3 421 PANTHER PTHR11119 3 421 1.8E-148 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APQ13_RS03850 0c9a5f7aabbeb8726d9e8fa66a9ae5a3 421 PANTHER PTHR11119:SF49 3 421 1.8E-148 T 25-04-2016 APQ13_RS03850 0c9a5f7aabbeb8726d9e8fa66a9ae5a3 421 Pfam PF00860 Permease family 20 393 6.1E-89 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APQ13_RS03850 0c9a5f7aabbeb8726d9e8fa66a9ae5a3 421 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 413 3.5E-117 T 25-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APQ13_RS03850 0c9a5f7aabbeb8726d9e8fa66a9ae5a3 421 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 25-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APQ13_RS04120 a4ff0e6d998a3891c33d3f2a12337377 72 Pfam PF15507 Domain of unknown function (DUF4649) 3 70 2.9E-32 T 25-04-2016 IPR027879 Protein of unknown function DUF4649 APQ13_RS08205 6651a9b65aaf53f9c5bc6dad519c3113 125 PANTHER PTHR37038:SF1 10 114 2.6E-25 T 25-04-2016 APQ13_RS08205 6651a9b65aaf53f9c5bc6dad519c3113 125 Pfam PF12844 Helix-turn-helix domain 16 55 1.6E-7 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08205 6651a9b65aaf53f9c5bc6dad519c3113 125 SMART SM00530 15 69 0.0092 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS08205 6651a9b65aaf53f9c5bc6dad519c3113 125 PANTHER PTHR37038 10 114 2.6E-25 T 25-04-2016 APQ13_RS08205 6651a9b65aaf53f9c5bc6dad519c3113 125 Gene3D G3DSA:1.10.260.40 8 69 4.1E-6 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS08205 6651a9b65aaf53f9c5bc6dad519c3113 125 SUPERFAMILY SSF47413 10 69 3.1E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS03135 c9e2826986a4be3e96b6a4b7fac9b112 102 PIRSF PIRSF002736 1 97 2.4E-43 T 25-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APQ13_RS03135 c9e2826986a4be3e96b6a4b7fac9b112 102 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 3.2E-37 T 25-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APQ13_RS03135 c9e2826986a4be3e96b6a4b7fac9b112 102 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.839 T 25-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APQ13_RS03135 c9e2826986a4be3e96b6a4b7fac9b112 102 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 4 86 1.9E-33 T 25-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein APQ13_RS03135 c9e2826986a4be3e96b6a4b7fac9b112 102 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 78 2.0E-33 T 25-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APQ13_RS05940 ea44980f97661b1d1033bee0bb1410f4 252 Gene3D G3DSA:3.10.180.40 82 185 1.2E-43 T 25-04-2016 APQ13_RS05940 ea44980f97661b1d1033bee0bb1410f4 252 SUPERFAMILY SSF54593 13 175 8.23E-8 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS05940 ea44980f97661b1d1033bee0bb1410f4 252 Pfam PF14507 CppA C-terminal 146 248 1.1E-39 T 25-04-2016 IPR032703 CppA, C-terminal APQ13_RS05940 ea44980f97661b1d1033bee0bb1410f4 252 Gene3D G3DSA:3.10.180.10 186 250 6.7E-17 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS05940 ea44980f97661b1d1033bee0bb1410f4 252 Gene3D G3DSA:3.10.180.10 4 81 1.9E-8 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APQ13_RS05940 ea44980f97661b1d1033bee0bb1410f4 252 Pfam PF14506 CppA N-terminal 9 132 8.5E-64 T 25-04-2016 IPR032702 CppA, N-terminal APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 SMART SM00316 4 72 2.3E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 PANTHER PTHR33370 2 72 9.9E-46 T 25-04-2016 APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 SUPERFAMILY SSF50249 2 71 5.9E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.635 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.0E-38 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 Gene3D G3DSA:2.40.50.140 2 72 1.3E-39 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08510 05943aa4fd4e93c664d9c55105fff944 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.6E-28 T 25-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APQ13_RS08260 924eb6740abcc48a3863ab03eb6ea1e0 163 PANTHER PTHR23091 1 157 4.1E-22 T 25-04-2016 APQ13_RS08260 924eb6740abcc48a3863ab03eb6ea1e0 163 SUPERFAMILY SSF55729 1 156 3.95E-29 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS08260 924eb6740abcc48a3863ab03eb6ea1e0 163 Gene3D G3DSA:3.40.630.30 1 158 6.1E-33 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase APQ13_RS08260 924eb6740abcc48a3863ab03eb6ea1e0 163 Pfam PF13673 Acetyltransferase (GNAT) domain 31 134 4.7E-14 T 25-04-2016 IPR000182 GNAT domain GO:0008080 APQ13_RS08635 8fde50f0adf6cbe3b8c725549e9d2b88 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 23 9.1E-4 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site APQ13_RS01625 d28192e56ca4e243e00bf8b6d864f5e5 97 Pfam PF13276 HTH-like domain 37 94 4.3E-15 T 25-04-2016 IPR025948 HTH-like domain APQ13_RS06550 38b15b6f34a64744524389fe80afbc09 485 PANTHER PTHR33843:SF5 2 462 1.8E-115 T 25-04-2016 APQ13_RS06550 38b15b6f34a64744524389fe80afbc09 485 Pfam PF03611 PTS system sugar-specific permease component 14 425 8.0E-112 T 25-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APQ13_RS06550 38b15b6f34a64744524389fe80afbc09 485 PANTHER PTHR33843 2 462 1.8E-115 T 25-04-2016 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 Gene3D G3DSA:3.40.50.1400 3 198 5.6E-61 T 25-04-2016 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 SUPERFAMILY SSF53800 4 319 2.04E-96 T 25-04-2016 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 Hamap MF_00323 Ferrochelatase [hemH]. 4 319 36.217 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 TIGRFAM TIGR00109 hemH: ferrochelatase 1 318 2.3E-98 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 ProSitePatterns PS00534 Ferrochelatase signature. 188 206 - T 25-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 PANTHER PTHR11108 1 319 1.2E-111 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 Pfam PF00762 Ferrochelatase 5 318 6.3E-105 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APQ13_RS08130 985e5521e2a6a221ee0545295c50607e 319 Gene3D G3DSA:3.40.50.1400 199 319 5.7E-36 T 25-04-2016 APQ13_RS04445 6f3c45de81406e940345f3fbfc31b901 285 Gene3D G3DSA:3.60.21.10 2 226 6.8E-13 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS04445 6f3c45de81406e940345f3fbfc31b901 285 TIGRFAM TIGR03729 acc_ester: putative phosphoesterase 3 226 1.1E-82 T 25-04-2016 IPR022302 Phosphoesterase, putative APQ13_RS04445 6f3c45de81406e940345f3fbfc31b901 285 SUPERFAMILY SSF56300 3 109 2.93E-17 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS04445 6f3c45de81406e940345f3fbfc31b901 285 SUPERFAMILY SSF56300 140 231 2.93E-17 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS08625 04599348a8b491a154ee302971191f12 325 PANTHER PTHR30012 1 325 3.2E-48 T 25-04-2016 APQ13_RS08625 04599348a8b491a154ee302971191f12 325 Pfam PF00482 Type II secretion system (T2SS), protein F 11 128 1.1E-7 T 25-04-2016 IPR018076 Type II secretion system F domain APQ13_RS08625 04599348a8b491a154ee302971191f12 325 Pfam PF00482 Type II secretion system (T2SS), protein F 196 316 2.3E-17 T 25-04-2016 IPR018076 Type II secretion system F domain APQ13_RS08625 04599348a8b491a154ee302971191f12 325 PRINTS PR00812 Bacterial general secretion pathway protein F signature 305 324 2.0E-7 T 25-04-2016 IPR003004 GspF/PilC family APQ13_RS08625 04599348a8b491a154ee302971191f12 325 PRINTS PR00812 Bacterial general secretion pathway protein F signature 100 128 2.0E-7 T 25-04-2016 IPR003004 GspF/PilC family APQ13_RS08625 04599348a8b491a154ee302971191f12 325 PRINTS PR00812 Bacterial general secretion pathway protein F signature 289 303 2.0E-7 T 25-04-2016 IPR003004 GspF/PilC family APQ13_RS08100 f18c80574ae58abeff700017dc556580 242 Pfam PF03883 Protein of unknown function (DUF328) 1 228 8.6E-56 T 25-04-2016 IPR005583 Peroxide stress protein YaaA APQ13_RS08100 f18c80574ae58abeff700017dc556580 242 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 240 30.094 T 25-04-2016 IPR005583 Peroxide stress protein YaaA APQ13_RS08100 f18c80574ae58abeff700017dc556580 242 PANTHER PTHR30283:SF3 2 239 5.0E-57 T 25-04-2016 APQ13_RS08100 f18c80574ae58abeff700017dc556580 242 PANTHER PTHR30283 2 239 5.0E-57 T 25-04-2016 APQ13_RS08300 b495c2946f7964eeaaed522eb01e6226 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 262 5.5E-16 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS08300 b495c2946f7964eeaaed522eb01e6226 273 PANTHER PTHR15822 1 266 3.1E-12 T 25-04-2016 APQ13_RS08300 b495c2946f7964eeaaed522eb01e6226 273 PANTHER PTHR15822:SF7 1 266 3.1E-12 T 25-04-2016 APQ13_RS08300 b495c2946f7964eeaaed522eb01e6226 273 SUPERFAMILY SSF56219 2 51 3.27E-28 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS08300 b495c2946f7964eeaaed522eb01e6226 273 SUPERFAMILY SSF56219 79 267 3.27E-28 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS08300 b495c2946f7964eeaaed522eb01e6226 273 Gene3D G3DSA:3.60.10.10 1 267 1.0E-19 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APQ13_RS08720 f83106d75e851d6a532b4d318d377e78 320 SUPERFAMILY SSF53822 36 314 5.69E-58 T 25-04-2016 IPR028082 Periplasmic binding protein-like I APQ13_RS08720 f83106d75e851d6a532b4d318d377e78 320 PANTHER PTHR30036 1 308 4.3E-29 T 25-04-2016 APQ13_RS08720 f83106d75e851d6a532b4d318d377e78 320 Pfam PF13407 Periplasmic binding protein domain 41 293 1.2E-37 T 25-04-2016 IPR025997 Periplasmic binding protein APQ13_RS08720 f83106d75e851d6a532b4d318d377e78 320 Gene3D G3DSA:3.40.50.2300 155 304 7.1E-35 T 25-04-2016 APQ13_RS08720 f83106d75e851d6a532b4d318d377e78 320 Gene3D G3DSA:3.40.50.2300 35 154 2.4E-27 T 25-04-2016 APQ13_RS06545 c72debdd64f6831227e0f5d5c1b02268 93 SUPERFAMILY SSF52794 1 92 7.06E-21 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS06545 c72debdd64f6831227e0f5d5c1b02268 93 Gene3D G3DSA:3.40.50.270 1 93 4.7E-18 T 25-04-2016 APQ13_RS06545 c72debdd64f6831227e0f5d5c1b02268 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 90 1.4E-16 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS06545 c72debdd64f6831227e0f5d5c1b02268 93 PANTHER PTHR33843 1 93 5.2E-15 T 25-04-2016 APQ13_RS02800 9c44121f970bbfa6e4a85c3d7598986a 374 Pfam PF01594 Domain of unknown function DUF20 21 359 3.2E-44 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS02800 9c44121f970bbfa6e4a85c3d7598986a 374 PANTHER PTHR21716 5 360 2.2E-46 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 629 829 5.0E-66 T 25-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 531 555 8.9E-5 T 25-04-2016 IPR023908 xxxLxxG heptad repeat APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 211 238 1.5E-4 T 25-04-2016 IPR023908 xxxLxxG heptad repeat APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 232 259 4.4E-6 T 25-04-2016 IPR023908 xxxLxxG heptad repeat APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 550 576 1.2E-6 T 25-04-2016 IPR023908 xxxLxxG heptad repeat APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 563 590 3.3E-6 T 25-04-2016 IPR023908 xxxLxxG heptad repeat APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 4 166 1.5E-62 T 25-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 PANTHER PTHR30294:SF25 4 244 2.5E-82 T 25-04-2016 APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 PANTHER PTHR30294:SF25 645 799 2.5E-82 T 25-04-2016 APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 PANTHER PTHR30294 4 244 2.5E-82 T 25-04-2016 APQ13_RS07820 ffede917dcb3a85dbefe6ef57a9207de 836 PANTHER PTHR30294 645 799 2.5E-82 T 25-04-2016 APQ13_RS05235 1809574ea27c2a4fcc221ae5c6fabde2 84 Pfam PF11364 Protein of unknown function (DUF3165) 1 80 2.0E-36 T 25-04-2016 IPR021506 Protein of unknown function DUF3165 APQ13_RS07825 6f02bf8f56e59c44087bca76898ed9f4 314 Pfam PF03595 Voltage-dependent anion channel 12 298 3.4E-17 T 25-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 APQ13_RS07825 6f02bf8f56e59c44087bca76898ed9f4 314 PANTHER PTHR37955:SF1 1 312 2.8E-62 T 25-04-2016 APQ13_RS07825 6f02bf8f56e59c44087bca76898ed9f4 314 PANTHER PTHR37955 1 312 2.8E-62 T 25-04-2016 APQ13_RS03120 c201e518a062a8f6ed68f28f5d8913d7 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 12 175 1.3E-48 T 25-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 APQ13_RS03120 c201e518a062a8f6ed68f28f5d8913d7 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 12 175 5.6E-51 T 25-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 APQ13_RS07945 4582aca10949fd98f29bc0cd91ed6d9b 614 Pfam PF13520 Amino acid permease 28 449 2.1E-31 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS07945 4582aca10949fd98f29bc0cd91ed6d9b 614 PANTHER PTHR11785 518 530 2.6E-158 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS07945 4582aca10949fd98f29bc0cd91ed6d9b 614 PANTHER PTHR11785 25 480 2.6E-158 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APQ13_RS07945 4582aca10949fd98f29bc0cd91ed6d9b 614 PANTHER PTHR11785:SF125 518 530 2.6E-158 T 25-04-2016 APQ13_RS07945 4582aca10949fd98f29bc0cd91ed6d9b 614 PANTHER PTHR11785:SF125 25 480 2.6E-158 T 25-04-2016 APQ13_RS08990 90358cfd3f1afe6d04cceda496d98d22 342 Gene3D G3DSA:3.40.30.10 125 242 7.7E-27 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS08990 90358cfd3f1afe6d04cceda496d98d22 342 SUPERFAMILY SSF52833 129 242 4.69E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS00120 5eb184486dccae5acbcb90bac86fcf78 108 Pfam PF03551 Transcriptional regulator PadR-like family 14 81 5.2E-20 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal APQ13_RS00120 5eb184486dccae5acbcb90bac86fcf78 108 PANTHER PTHR33169 10 100 5.6E-23 T 25-04-2016 APQ13_RS00120 5eb184486dccae5acbcb90bac86fcf78 108 PANTHER PTHR33169:SF3 10 100 5.6E-23 T 25-04-2016 APQ13_RS00120 5eb184486dccae5acbcb90bac86fcf78 108 Gene3D G3DSA:1.10.10.10 9 101 3.7E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS00120 5eb184486dccae5acbcb90bac86fcf78 108 SUPERFAMILY SSF46785 11 102 6.94E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APQ13_RS06280 6a5ae3b6fac393d5d25eb4c9569a58d8 156 Gene3D G3DSA:3.40.50.850 4 148 1.4E-18 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APQ13_RS06280 6a5ae3b6fac393d5d25eb4c9569a58d8 156 Pfam PF00857 Isochorismatase family 5 136 1.0E-15 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APQ13_RS06280 6a5ae3b6fac393d5d25eb4c9569a58d8 156 SUPERFAMILY SSF52499 4 150 1.24E-21 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APQ13_RS07200 d50effb5595fd26b854f0081400f9f8e 264 Pfam PF01226 Formate/nitrite transporter 11 253 2.6E-44 T 25-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APQ13_RS07200 d50effb5595fd26b854f0081400f9f8e 264 PANTHER PTHR30520 1 264 3.2E-75 T 25-04-2016 APQ13_RS07200 d50effb5595fd26b854f0081400f9f8e 264 Gene3D G3DSA:1.20.1080.10 28 257 1.2E-48 T 25-04-2016 IPR023271 Aquaporin-like APQ13_RS07200 d50effb5595fd26b854f0081400f9f8e 264 PANTHER PTHR30520:SF5 1 264 3.2E-75 T 25-04-2016 APQ13_RS03405 fb57d457cfbd888b0f515c32613b5327 183 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 87 3.7E-10 T 25-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APQ13_RS03405 fb57d457cfbd888b0f515c32613b5327 183 SUPERFAMILY SSF69118 1 180 3.0E-41 T 25-04-2016 IPR029032 AhpD-like APQ13_RS03405 fb57d457cfbd888b0f515c32613b5327 183 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 119 2.3E-12 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APQ13_RS03405 fb57d457cfbd888b0f515c32613b5327 183 PANTHER PTHR35446 1 181 1.6E-88 T 25-04-2016 APQ13_RS03405 fb57d457cfbd888b0f515c32613b5327 183 Gene3D G3DSA:1.20.1290.10 1 181 4.2E-32 T 25-04-2016 IPR029032 AhpD-like APQ13_RS03405 fb57d457cfbd888b0f515c32613b5327 183 PANTHER PTHR35446:SF1 1 181 1.6E-88 T 25-04-2016 APQ13_RS05620 d20cde66b0947d8d64bfc0b43bb5b93f 112 Pfam PF05103 DivIVA protein 6 79 3.9E-20 T 25-04-2016 IPR007793 DivIVA family APQ13_RS05620 d20cde66b0947d8d64bfc0b43bb5b93f 112 PIRSF PIRSF029938 1 112 7.0E-48 T 25-04-2016 IPR011229 Cell cycle protein GpsB APQ13_RS05620 d20cde66b0947d8d64bfc0b43bb5b93f 112 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 1 108 26.672 T 25-04-2016 IPR011229 Cell cycle protein GpsB APQ13_RS05620 d20cde66b0947d8d64bfc0b43bb5b93f 112 PANTHER PTHR35794:SF1 1 112 2.7E-42 T 25-04-2016 APQ13_RS05620 d20cde66b0947d8d64bfc0b43bb5b93f 112 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 7 39 2.8E-16 T 25-04-2016 IPR019933 DivIVA domain APQ13_RS05620 d20cde66b0947d8d64bfc0b43bb5b93f 112 PANTHER PTHR35794 1 112 2.7E-42 T 25-04-2016 APQ13_RS05785 aa91cbb66a5f148e7e7b7dc3fa34984b 288 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APQ13_RS05785 aa91cbb66a5f148e7e7b7dc3fa34984b 288 SUPERFAMILY SSF52540 2 210 9.65E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05785 aa91cbb66a5f148e7e7b7dc3fa34984b 288 SMART SM00382 27 203 2.8E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain APQ13_RS05785 aa91cbb66a5f148e7e7b7dc3fa34984b 288 Pfam PF00005 ABC transporter 19 148 4.6E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APQ13_RS05785 aa91cbb66a5f148e7e7b7dc3fa34984b 288 PANTHER PTHR24220 4 207 3.6E-82 T 25-04-2016 APQ13_RS05785 aa91cbb66a5f148e7e7b7dc3fa34984b 288 Gene3D G3DSA:3.40.50.300 2 212 5.3E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS08540 1ee6ae1654ab4265d32846f5ff4ea758 428 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 73 214 2.7E-4 T 25-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APQ13_RS08540 1ee6ae1654ab4265d32846f5ff4ea758 428 PANTHER PTHR34378 1 421 2.2E-83 T 25-04-2016 APQ13_RS08540 1ee6ae1654ab4265d32846f5ff4ea758 428 PANTHER PTHR34378:SF2 1 421 2.2E-83 T 25-04-2016 APQ13_RS08540 1ee6ae1654ab4265d32846f5ff4ea758 428 SUPERFAMILY SSF55931 15 37 5.69E-35 T 25-04-2016 APQ13_RS08540 1ee6ae1654ab4265d32846f5ff4ea758 428 SUPERFAMILY SSF55931 67 257 5.69E-35 T 25-04-2016 APQ13_RS08540 1ee6ae1654ab4265d32846f5ff4ea758 428 SUPERFAMILY SSF55931 309 403 5.69E-35 T 25-04-2016 APQ13_RS02130 c772bf644bd9ad4b8eeaae350ea917ec 213 Pfam PF11611 Domain of unknown function (DUF4352) 90 198 4.9E-11 T 25-04-2016 IPR029051 Domain of unknown function DUF4352 APQ13_RS02130 c772bf644bd9ad4b8eeaae350ea917ec 213 Gene3D G3DSA:2.60.40.1240 90 202 2.0E-12 T 25-04-2016 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 Gene3D G3DSA:3.40.430.10 8 169 1.6E-49 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 SUPERFAMILY SSF53597 3 169 2.38E-50 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PANTHER PTHR22778:SF16 9 170 1.1E-30 T 25-04-2016 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 Pfam PF00186 Dihydrofolate reductase 8 167 1.0E-51 T 25-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PRINTS PR00070 Dihydrofolate reductase signature 34 42 2.2E-11 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PRINTS PR00070 Dihydrofolate reductase signature 100 114 2.2E-11 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PRINTS PR00070 Dihydrofolate reductase signature 20 30 2.2E-11 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PRINTS PR00070 Dihydrofolate reductase signature 47 58 2.2E-11 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PIRSF PIRSF000194 3 170 7.7E-49 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 PANTHER PTHR22778 9 170 1.1E-30 T 25-04-2016 APQ13_RS03465 9154fa3c6b732654ade97dd8ec939a28 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 20 42 - T 25-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.7E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.7E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.7E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PANTHER PTHR24322 158 189 1.7E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PANTHER PTHR24322 14 142 1.7E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 SUPERFAMILY SSF51735 9 264 1.14E-61 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 Pfam PF00106 short chain dehydrogenase 10 198 4.5E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 Gene3D G3DSA:3.40.50.720 6 264 1.1E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.1E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.1E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.1E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 2.1E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.1E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS06350 2a182ca53d2875251a302c54f286438c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.1E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS04755 22f1298b4e40b7909927ace3140c1613 249 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 4 249 1.5E-68 T 25-04-2016 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE APQ13_RS06400 e9a13840e39a6440dd5d42dddfe633bf 142 PANTHER PTHR33303 1 138 1.8E-39 T 25-04-2016 APQ13_RS06400 e9a13840e39a6440dd5d42dddfe633bf 142 Pfam PF13380 CoA binding domain 21 138 2.5E-32 T 25-04-2016 IPR003781 CoA-binding GO:0048037 APQ13_RS06400 e9a13840e39a6440dd5d42dddfe633bf 142 Gene3D G3DSA:3.40.50.720 10 141 1.0E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS06400 e9a13840e39a6440dd5d42dddfe633bf 142 SMART SM00881 16 111 1.3E-15 T 25-04-2016 IPR003781 CoA-binding GO:0048037 APQ13_RS06400 e9a13840e39a6440dd5d42dddfe633bf 142 SUPERFAMILY SSF51735 12 141 9.35E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05055 02f46a296b4b024c9088b64772db6456 285 SUPERFAMILY SSF52266 52 278 2.11E-40 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS05055 02f46a296b4b024c9088b64772db6456 285 PANTHER PTHR30383 50 279 2.9E-24 T 25-04-2016 APQ13_RS05055 02f46a296b4b024c9088b64772db6456 285 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 55 268 8.2E-28 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS05055 02f46a296b4b024c9088b64772db6456 285 Gene3D G3DSA:3.40.50.1110 52 281 5.3E-53 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain APQ13_RS00810 3bfe8cdc5b49aa867c442cf5802f178a 121 TIGRFAM TIGR04342 EXLDI: EXLDI protein 3 121 1.9E-35 T 25-04-2016 IPR027580 EXLDI protein APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 SUPERFAMILY SSF51735 4 243 7.22E-83 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 241 3.4E-98 T 25-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 Gene3D G3DSA:3.40.50.720 2 243 1.8E-87 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 2.7E-65 T 25-04-2016 APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PANTHER PTHR24322:SF328 153 185 6.2E-62 T 25-04-2016 APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PANTHER PTHR24322:SF328 10 137 6.2E-62 T 25-04-2016 APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.9E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.9E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.9E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.9E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.9E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PANTHER PTHR24322 153 185 6.2E-62 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PANTHER PTHR24322 10 137 6.2E-62 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 2.5E-8 T 25-04-2016 APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS09650 722fb0eea08866536f9689feda98f60a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APQ13_RS08645 b7bbfdfbf089056d947184ef4e141da1 144 PIRSF PIRSF031611 1 144 3.0E-60 T 25-04-2016 IPR016977 Competence operon G, ComGF APQ13_RS08645 b7bbfdfbf089056d947184ef4e141da1 144 Pfam PF15980 Putative Competence protein ComGF 36 133 6.4E-26 T 25-04-2016 IPR016977 Competence operon G, ComGF APQ13_RS01475 0d965c9c23d467bfb1539f40eb60900f 583 SUPERFAMILY SSF74914 145 471 1.57E-104 T 25-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain APQ13_RS01475 0d965c9c23d467bfb1539f40eb60900f 583 Pfam PF08363 Glucan-binding protein C 166 455 5.1E-88 T 25-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain APQ13_RS01475 0d965c9c23d467bfb1539f40eb60900f 583 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 548 583 1.3E-4 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain APQ13_RS05660 95cd6b3a3f2ec11dd6066e066b9dce1c 74 Pfam PF13268 Protein of unknown function (DUF4059) 1 72 3.6E-32 T 25-04-2016 IPR025134 Protein of unknown function DUF4059 APQ13_RS01515 8bf2f73b6e25073b0392aa53cb273ed5 546 SUPERFAMILY SSF68923 53 230 2.79E-35 T 25-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APQ13_RS01515 8bf2f73b6e25073b0392aa53cb273ed5 546 Gene3D G3DSA:3.90.228.20 363 491 2.5E-23 T 25-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APQ13_RS01515 8bf2f73b6e25073b0392aa53cb273ed5 546 Gene3D G3DSA:3.90.228.20 235 306 2.5E-23 T 25-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APQ13_RS01515 8bf2f73b6e25073b0392aa53cb273ed5 546 Pfam PF01293 Phosphoenolpyruvate carboxykinase 102 488 1.7E-19 T 25-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APQ13_RS01515 8bf2f73b6e25073b0392aa53cb273ed5 546 SUPERFAMILY SSF53795 233 535 8.24E-65 T 25-04-2016 APQ13_RS03530 93ee054df99f3449af585c791dc3d1a1 284 SMART SM00062 37 277 7.2E-25 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS03530 93ee054df99f3449af585c791dc3d1a1 284 Gene3D G3DSA:3.40.190.10 36 115 9.6E-28 T 25-04-2016 APQ13_RS03530 93ee054df99f3449af585c791dc3d1a1 284 Gene3D G3DSA:3.40.190.10 235 278 9.6E-28 T 25-04-2016 APQ13_RS03530 93ee054df99f3449af585c791dc3d1a1 284 SUPERFAMILY SSF53850 37 278 1.09E-37 T 25-04-2016 APQ13_RS03530 93ee054df99f3449af585c791dc3d1a1 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 276 3.4E-37 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APQ13_RS03530 93ee054df99f3449af585c791dc3d1a1 284 Gene3D G3DSA:3.40.190.10 116 217 1.6E-6 T 25-04-2016 APQ13_RS05670 07063ed0ad44b6e0f2886949a537d583 267 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 33 143 4.0E-15 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APQ13_RS05670 07063ed0ad44b6e0f2886949a537d583 267 PANTHER PTHR30614 24 254 5.1E-71 T 25-04-2016 APQ13_RS05670 07063ed0ad44b6e0f2886949a537d583 267 PANTHER PTHR30614:SF16 24 254 5.1E-71 T 25-04-2016 APQ13_RS05670 07063ed0ad44b6e0f2886949a537d583 267 Gene3D G3DSA:1.10.3720.10 34 248 2.4E-36 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS05670 07063ed0ad44b6e0f2886949a537d583 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 54 249 5.2E-20 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS05670 07063ed0ad44b6e0f2886949a537d583 267 SUPERFAMILY SSF161098 35 234 1.96E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS08710 ecdbb7c82bee0624e2308643202015c1 118 Pfam PF00581 Rhodanese-like domain 21 109 2.9E-8 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS08710 ecdbb7c82bee0624e2308643202015c1 118 SMART SM00450 18 114 4.1E-10 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS08710 ecdbb7c82bee0624e2308643202015c1 118 SUPERFAMILY SSF52821 18 117 1.27E-17 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS08710 ecdbb7c82bee0624e2308643202015c1 118 Gene3D G3DSA:3.40.250.10 26 117 4.9E-16 T 25-04-2016 IPR001763 Rhodanese-like domain APQ13_RS02090 d0b9f19b7c35d34fe987c270633c42e7 107 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 23 87 2.9E-6 T 25-04-2016 IPR007711 Toxin HigB-1 APQ13_RS02090 d0b9f19b7c35d34fe987c270633c42e7 107 SUPERFAMILY SSF143011 22 88 4.71E-8 T 25-04-2016 APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 Pfam PF02096 60Kd inner membrane protein 55 236 1.3E-51 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 54 236 1.2E-57 T 25-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 240 30.405 T 25-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 PANTHER PTHR12428:SF14 55 238 5.1E-55 T 25-04-2016 APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 PRINTS PR00701 60kDa inner membrane protein signature 119 142 7.0E-8 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 PRINTS PR00701 60kDa inner membrane protein signature 203 226 7.0E-8 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS06225 8bc877b0436c4549aff74f97edca4cd1 271 PANTHER PTHR12428 55 238 5.1E-55 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APQ13_RS01455 f915e82ea30df8d27b83d83bed8a9e49 63 SUPERFAMILY SSF54786 5 62 4.32E-13 T 25-04-2016 APQ13_RS01455 f915e82ea30df8d27b83d83bed8a9e49 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 61 9.6E-17 T 25-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 APQ13_RS01455 f915e82ea30df8d27b83d83bed8a9e49 63 Gene3D G3DSA:3.30.920.30 5 62 1.4E-15 T 25-04-2016 APQ13_RS07390 461779899af85b80b2c726cdebb5974a 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 67 101 9.6E-6 T 25-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APQ13_RS07390 461779899af85b80b2c726cdebb5974a 108 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 62 106 2.5E-7 T 25-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APQ13_RS07390 461779899af85b80b2c726cdebb5974a 108 SUPERFAMILY SSF143011 53 105 6.02E-11 T 25-04-2016 APQ13_RS02055 1e63e00d4ff17e39bb8e5b28c65da83b 368 SUPERFAMILY SSF116734 202 365 8.5E-22 T 25-04-2016 APQ13_RS02055 1e63e00d4ff17e39bb8e5b28c65da83b 368 Pfam PF01420 Type I restriction modification DNA specificity domain 201 345 2.0E-12 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APQ13_RS02055 1e63e00d4ff17e39bb8e5b28c65da83b 368 Pfam PF01420 Type I restriction modification DNA specificity domain 4 184 5.6E-23 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APQ13_RS02055 1e63e00d4ff17e39bb8e5b28c65da83b 368 PANTHER PTHR30408 5 194 5.6E-16 T 25-04-2016 APQ13_RS02055 1e63e00d4ff17e39bb8e5b28c65da83b 368 SUPERFAMILY SSF116734 5 194 1.32E-37 T 25-04-2016 APQ13_RS02055 1e63e00d4ff17e39bb8e5b28c65da83b 368 PANTHER PTHR30408:SF7 5 194 5.6E-16 T 25-04-2016 APQ13_RS02915 716487f9a0f9661ce435bfd1bade2d59 190 Pfam PF12822 Protein of unknown function (DUF3816) 10 182 7.4E-16 T 25-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 APQ13_RS02365 9e580927ae5853f2a3dcb215e852e887 204 PANTHER PTHR12677:SF26 15 190 1.8E-12 T 25-04-2016 APQ13_RS02365 9e580927ae5853f2a3dcb215e852e887 204 Pfam PF09335 SNARE associated Golgi protein 74 190 5.0E-18 T 25-04-2016 IPR032816 SNARE associated Golgi protein APQ13_RS02365 9e580927ae5853f2a3dcb215e852e887 204 PANTHER PTHR12677 15 190 1.8E-12 T 25-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 SUPERFAMILY SSF116726 133 214 6.8E-8 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 Gene3D G3DSA:3.40.50.720 1 144 9.8E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.0E-12 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 Gene3D G3DSA:3.30.70.1450 149 214 1.7E-4 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 PANTHER PTHR16254 1 125 3.0E-29 T 25-04-2016 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 Pfam PF02080 TrkA-C domain 156 215 1.3E-8 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 PANTHER PTHR16254:SF23 1 125 3.0E-29 T 25-04-2016 APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 SUPERFAMILY SSF51735 1 144 6.14E-30 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS00765 75b7f4fbe58db2c7c28b2f1e1b913d69 217 Pfam PF02254 TrkA-N domain 3 117 1.6E-26 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APQ13_RS06590 a39e299bf3e68b597d2c45ef35e3602c 200 Gene3D G3DSA:3.40.109.10 3 199 3.7E-65 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS06590 a39e299bf3e68b597d2c45ef35e3602c 200 PANTHER PTHR23026 1 198 1.1E-66 T 25-04-2016 APQ13_RS06590 a39e299bf3e68b597d2c45ef35e3602c 200 Pfam PF00881 Nitroreductase family 9 177 4.0E-16 T 25-04-2016 IPR029479 Nitroreductase APQ13_RS06590 a39e299bf3e68b597d2c45ef35e3602c 200 SUPERFAMILY SSF55469 3 199 3.53E-69 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS06590 a39e299bf3e68b597d2c45ef35e3602c 200 PANTHER PTHR23026:SF89 1 198 1.1E-66 T 25-04-2016 APQ13_RS01340 5743d216277c6bf23d8d1582b1473a8b 318 PANTHER PTHR37804 2 297 2.2E-45 T 25-04-2016 APQ13_RS01340 5743d216277c6bf23d8d1582b1473a8b 318 Pfam PF07949 YbbR-like protein 52 135 8.0E-10 T 25-04-2016 IPR012505 YbbR-like APQ13_RS01340 5743d216277c6bf23d8d1582b1473a8b 318 Pfam PF07949 YbbR-like protein 237 313 4.9E-10 T 25-04-2016 IPR012505 YbbR-like APQ13_RS01340 5743d216277c6bf23d8d1582b1473a8b 318 Pfam PF07949 YbbR-like protein 151 219 6.8E-8 T 25-04-2016 IPR012505 YbbR-like APQ13_RS00035 5c9e9f4f1987c9c412fdbdf97a80f4e2 229 PANTHER PTHR23291 2 229 1.8E-71 T 25-04-2016 IPR006214 Bax inhibitor 1-related APQ13_RS00035 5c9e9f4f1987c9c412fdbdf97a80f4e2 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 16 225 5.8E-56 T 25-04-2016 APQ13_RS00035 5c9e9f4f1987c9c412fdbdf97a80f4e2 229 PANTHER PTHR23291:SF42 2 229 1.8E-71 T 25-04-2016 APQ13_RS07625 f72355efc6e5f9286e5c540777d5ff7f 123 PANTHER PTHR40027 1 121 1.9E-22 T 25-04-2016 APQ13_RS07625 f72355efc6e5f9286e5c540777d5ff7f 123 Pfam PF04977 Septum formation initiator 42 119 1.6E-20 T 25-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APQ13_RS07625 f72355efc6e5f9286e5c540777d5ff7f 123 PANTHER PTHR40027:SF1 1 121 1.9E-22 T 25-04-2016 APQ13_RS04280 906e31fd0c674dc08c313335e5b6fecd 70 PIRSF PIRSF037246 1 70 4.7E-37 T 25-04-2016 IPR017154 Uncharacterised conserved protein UCP037246 APQ13_RS04280 906e31fd0c674dc08c313335e5b6fecd 70 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 65 8.0E-11 T 25-04-2016 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 APQ13_RS00685 b280a23cb0e226047a734f76b5bf0cf3 64 Pfam PF11676 Protein of unknown function (DUF3272) 3 62 8.8E-22 T 25-04-2016 IPR021690 Protein of unknown function DUF3272 APQ13_RS04920 178f87fb5f41accc0d74c7bcd2359819 170 Pfam PF13787 Protein of unknown function with HXXEE motif 6 122 1.1E-21 T 25-04-2016 IPR025671 Protein of unknown function with HXXEE motif APQ13_RS05455 a152ee5372c2823447f74f690b860698 312 PIRSF PIRSF016080 19 312 3.3E-113 T 25-04-2016 IPR021191 Restriction endonuclease, type II, DpmII GO:0003677|GO:0009036|GO:0009307 APQ13_RS05455 a152ee5372c2823447f74f690b860698 312 Pfam PF04556 DpnII restriction endonuclease 25 308 3.3E-74 T 25-04-2016 IPR007637 Restriction endonuclease, type II, DpmII-like GO:0003677|GO:0009036|GO:0009307 APQ13_RS00820 cf31270b7cdcf2170d0a20221aef003c 245 PIRSF PIRSF006648 2 242 8.6E-15 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APQ13_RS00820 cf31270b7cdcf2170d0a20221aef003c 245 PANTHER PTHR30294 1 241 4.7E-47 T 25-04-2016 APQ13_RS00820 cf31270b7cdcf2170d0a20221aef003c 245 PANTHER PTHR30294:SF6 1 241 4.7E-47 T 25-04-2016 APQ13_RS00820 cf31270b7cdcf2170d0a20221aef003c 245 Pfam PF01061 ABC-2 type transporter 2 204 4.5E-13 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APQ13_RS03270 7c611147e6f8e9f7a76e67b43e25bb65 112 Pfam PF03477 ATP cone domain 1 92 7.2E-18 T 25-04-2016 IPR005144 ATP-cone domain APQ13_RS03270 7c611147e6f8e9f7a76e67b43e25bb65 112 PANTHER PTHR21075 1 96 8.5E-16 T 25-04-2016 APQ13_RS02515 2186f4b52abee3bc1f70052ff1edfb0a 877 PANTHER PTHR30489 4 475 9.6E-50 T 25-04-2016 APQ13_RS02515 2186f4b52abee3bc1f70052ff1edfb0a 877 Pfam PF02687 FtsX-like permease family 751 857 5.8E-16 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS02515 2186f4b52abee3bc1f70052ff1edfb0a 877 Pfam PF02687 FtsX-like permease family 351 469 4.9E-15 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS02515 2186f4b52abee3bc1f70052ff1edfb0a 877 PANTHER PTHR30489:SF11 4 475 9.6E-50 T 25-04-2016 APQ13_RS06740 ffa4b310bb652152e1f0e1b8ea149f76 187 Pfam PF04191 Phospholipid methyltransferase 70 169 4.8E-20 T 25-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 APQ13_RS06740 ffa4b310bb652152e1f0e1b8ea149f76 187 PANTHER PTHR12714 41 187 4.1E-31 T 25-04-2016 APQ13_RS07410 8bfa3bc8d33d58e091eaeffe2fc69ed1 235 PANTHER PTHR10928:SF2 35 205 2.2E-29 T 25-04-2016 APQ13_RS07410 8bfa3bc8d33d58e091eaeffe2fc69ed1 235 SUPERFAMILY SSF103359 32 235 1.83E-70 T 25-04-2016 APQ13_RS07410 8bfa3bc8d33d58e091eaeffe2fc69ed1 235 Pfam PF05076 Suppressor of fused protein (SUFU) 68 232 5.6E-34 T 25-04-2016 IPR020941 Suppressor of fused-like domain APQ13_RS07410 8bfa3bc8d33d58e091eaeffe2fc69ed1 235 PANTHER PTHR10928 35 205 2.2E-29 T 25-04-2016 IPR007768 Suppressor of fused APQ13_RS02140 591cf9c647cc4bd43906bc6345fafab4 98 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 64 3.3E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APQ13_RS02140 591cf9c647cc4bd43906bc6345fafab4 98 PANTHER PTHR30055:SF55 2 81 4.4E-16 T 25-04-2016 APQ13_RS02140 591cf9c647cc4bd43906bc6345fafab4 98 SUPERFAMILY SSF46689 10 77 5.64E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 APQ13_RS02140 591cf9c647cc4bd43906bc6345fafab4 98 Gene3D G3DSA:1.10.357.10 15 81 3.7E-11 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APQ13_RS02140 591cf9c647cc4bd43906bc6345fafab4 98 PANTHER PTHR30055 2 81 4.4E-16 T 25-04-2016 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 29 413 6.6E-100 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PANTHER PTHR11706:SF33 1 445 3.8E-156 T 25-04-2016 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PANTHER PTHR11706 1 445 3.8E-156 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 Pfam PF01566 Natural resistance-associated macrophage protein 49 419 1.8E-110 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 327 346 3.6E-50 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 218 241 3.6E-50 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 372 3.6E-50 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 136 155 3.6E-50 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 389 408 3.6E-50 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 108 134 3.6E-50 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS04275 288614e3d4d0f6093070b0606732b56f 446 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 20 445 34.403 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APQ13_RS00405 65733aafb78b95adeb64bcf8a215edc7 151 Pfam PF11694 Protein of unknown function (DUF3290) 2 144 6.1E-43 T 25-04-2016 IPR021707 Protein of unknown function DUF3290 APQ13_RS06695 8b1ea18433624429404d391f1959af10 406 PANTHER PTHR30294:SF12 1 405 2.6E-69 T 25-04-2016 APQ13_RS06695 8b1ea18433624429404d391f1959af10 406 PANTHER PTHR30294 1 405 2.6E-69 T 25-04-2016 APQ13_RS06695 8b1ea18433624429404d391f1959af10 406 Pfam PF12698 ABC-2 family transporter protein 18 397 3.9E-41 T 25-04-2016 APQ13_RS08695 d94175a574cde0ed335380ffabb8a748 109 PANTHER PTHR10438 8 107 1.6E-37 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APQ13_RS08695 d94175a574cde0ed335380ffabb8a748 109 SUPERFAMILY SSF52833 5 105 3.72E-22 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS08695 d94175a574cde0ed335380ffabb8a748 109 PANTHER PTHR10438:SF301 8 107 1.6E-37 T 25-04-2016 APQ13_RS08695 d94175a574cde0ed335380ffabb8a748 109 Gene3D G3DSA:3.40.30.10 8 104 3.4E-20 T 25-04-2016 IPR012336 Thioredoxin-like fold APQ13_RS08695 d94175a574cde0ed335380ffabb8a748 109 Pfam PF00085 Thioredoxin 8 102 1.1E-14 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 APQ13_RS02855 cc676e29bba04cf26e43337d5b9d6af5 311 PANTHER PTHR30040 9 307 9.1E-91 T 25-04-2016 APQ13_RS02855 cc676e29bba04cf26e43337d5b9d6af5 311 Pfam PF02424 ApbE family 10 287 3.7E-68 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APQ13_RS02855 cc676e29bba04cf26e43337d5b9d6af5 311 PANTHER PTHR30040:SF2 9 307 9.1E-91 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APQ13_RS02855 cc676e29bba04cf26e43337d5b9d6af5 311 PIRSF PIRSF006268 1 311 5.0E-90 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APQ13_RS02855 cc676e29bba04cf26e43337d5b9d6af5 311 SUPERFAMILY SSF143631 5 307 1.94E-84 T 25-04-2016 IPR003374 ApbE-like domain APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 SUPERFAMILY SSF102114 30 232 2.35E-28 T 25-04-2016 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 Pfam PF04055 Radical SAM superfamily 31 196 7.5E-32 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 Pfam PF13353 4Fe-4S single cluster domain 23 159 7.4E-16 T 25-04-2016 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 PANTHER PTHR30352:SF9 5 249 5.5E-117 T 25-04-2016 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 PANTHER PTHR30352 5 249 5.5E-117 T 25-04-2016 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 Gene3D G3DSA:3.80.30.10 79 252 4.3E-66 T 25-04-2016 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 ProSitePatterns PS01087 Radical activating enzymes signature. 25 46 - T 25-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APQ13_RS00170 765b6d54c84bd256023f9371518db40c 263 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 14 250 4.7E-94 T 25-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 APQ13_RS08900 472ab24def34e1c86047d9c28ef67f76 178 PANTHER PTHR41303:SF1 1 178 5.4E-36 T 25-04-2016 APQ13_RS08900 472ab24def34e1c86047d9c28ef67f76 178 Pfam PF02620 Uncharacterized ACR, COG1399 54 174 5.6E-23 T 25-04-2016 IPR003772 Protein of unknown function DUF177 APQ13_RS08900 472ab24def34e1c86047d9c28ef67f76 178 PANTHER PTHR41303 1 178 5.4E-36 T 25-04-2016 APQ13_RS03810 6e92fa804cd49297a7443b1e4d39f5f4 79 Hamap MF_00088 UPF0109 protein . 4 77 15.587 T 25-04-2016 IPR020627 Uncharacterised protein family UPF0109 APQ13_RS03810 6e92fa804cd49297a7443b1e4d39f5f4 79 Gene3D G3DSA:3.30.300.120 8 77 6.9E-11 T 25-04-2016 APQ13_RS03810 6e92fa804cd49297a7443b1e4d39f5f4 79 Pfam PF13083 KH domain 6 76 3.4E-16 T 25-04-2016 APQ13_RS03810 6e92fa804cd49297a7443b1e4d39f5f4 79 PANTHER PTHR34654 2 78 1.5E-22 T 25-04-2016 APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 SUPERFAMILY SSF109709 90 197 1.18E-32 T 25-04-2016 APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 Pfam PF02195 ParB-like nuclease domain 8 95 8.3E-26 T 25-04-2016 IPR003115 ParB/Sulfiredoxin APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 SMART SM00470 6 96 4.0E-32 T 25-04-2016 IPR003115 ParB/Sulfiredoxin APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 PANTHER PTHR33375:SF3 3 256 6.7E-92 T 25-04-2016 APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 Gene3D G3DSA:3.90.1530.10 2 102 2.9E-36 T 25-04-2016 APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 SUPERFAMILY SSF110849 6 98 5.49E-27 T 25-04-2016 IPR003115 ParB/Sulfiredoxin APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 3 179 2.8E-57 T 25-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 APQ13_RS07665 07b36b3952e7cb0e00988bb9d51e86da 256 PANTHER PTHR33375 3 256 6.7E-92 T 25-04-2016 APQ13_RS08405 5bf61ed6962009d445b2d602c4e7b197 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 1.2E-65 T 25-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APQ13_RS08405 5bf61ed6962009d445b2d602c4e7b197 207 Gene3D G3DSA:3.40.1370.10 58 207 7.6E-61 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APQ13_RS08405 5bf61ed6962009d445b2d602c4e7b197 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.1E-78 T 25-04-2016 IPR013005 50S ribosomal protein uL4 APQ13_RS08405 5bf61ed6962009d445b2d602c4e7b197 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.545 T 25-04-2016 IPR013005 50S ribosomal protein uL4 APQ13_RS08405 5bf61ed6962009d445b2d602c4e7b197 207 SUPERFAMILY SSF52166 1 206 5.23E-78 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APQ13_RS08405 5bf61ed6962009d445b2d602c4e7b197 207 PANTHER PTHR10746 1 206 2.4E-89 T 25-04-2016 IPR013005 50S ribosomal protein uL4 APQ13_RS00115 6e090a8af505bbfef640a3ed467c2a75 198 Pfam PF08006 Protein of unknown function (DUF1700) 1 188 2.2E-18 T 25-04-2016 IPR012963 Protein of unknown function DUF1700 APQ13_RS02165 d7fd16a4dc93430946a058c19369972b 200 Gene3D G3DSA:3.40.109.10 1 198 9.6E-50 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS02165 d7fd16a4dc93430946a058c19369972b 200 Pfam PF00881 Nitroreductase family 8 180 4.5E-26 T 25-04-2016 IPR029479 Nitroreductase APQ13_RS02165 d7fd16a4dc93430946a058c19369972b 200 PANTHER PTHR23026:SF115 1 200 3.9E-47 T 25-04-2016 APQ13_RS02165 d7fd16a4dc93430946a058c19369972b 200 PANTHER PTHR23026 1 200 3.9E-47 T 25-04-2016 APQ13_RS02165 d7fd16a4dc93430946a058c19369972b 200 SUPERFAMILY SSF55469 1 198 2.22E-47 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS05220 d568c278138035fb5700d1ab2efcdd24 374 Pfam PF08478 POTRA domain, FtsQ-type 127 197 4.0E-15 T 25-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APQ13_RS05220 d568c278138035fb5700d1ab2efcdd24 374 Pfam PF03799 Cell division protein FtsQ 201 314 2.0E-5 T 25-04-2016 IPR005548 Cell division protein FtsQ/DivIB APQ13_RS05220 d568c278138035fb5700d1ab2efcdd24 374 PANTHER PTHR37820 16 366 5.6E-32 T 25-04-2016 APQ13_RS05220 d568c278138035fb5700d1ab2efcdd24 374 Hamap MF_00912 Cell division protein DivIB [divIB]. 29 343 26.827 T 25-04-2016 IPR026580 Cell division protein DivIB APQ13_RS04005 27c84767ebc5e9eeb3b0cd6c35ace098 384 SUPERFAMILY SSF53756 30 380 1.26E-24 T 25-04-2016 APQ13_RS04005 27c84767ebc5e9eeb3b0cd6c35ace098 384 Pfam PF09314 Domain of unknown function (DUF1972) 2 185 3.7E-98 T 25-04-2016 IPR015393 Domain of unknown function DUF1972 APQ13_RS00285 d5a22520d2942d41281e1d3b20b91625 318 PANTHER PTHR30482 1 315 2.0E-104 T 25-04-2016 APQ13_RS00285 d5a22520d2942d41281e1d3b20b91625 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 290 1.0E-44 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APQ13_RS00285 d5a22520d2942d41281e1d3b20b91625 318 PANTHER PTHR30482:SF10 1 315 2.0E-104 T 25-04-2016 APQ13_RS05910 939831bd93280fdb9b943c4dcd3a9517 135 SUPERFAMILY SSF47413 1 66 1.85E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS05910 939831bd93280fdb9b943c4dcd3a9517 135 SMART SM00530 6 61 3.1E-13 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS05910 939831bd93280fdb9b943c4dcd3a9517 135 Pfam PF01381 Helix-turn-helix 7 61 1.0E-14 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APQ13_RS05910 939831bd93280fdb9b943c4dcd3a9517 135 Gene3D G3DSA:1.10.260.40 1 65 4.9E-26 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS05910 939831bd93280fdb9b943c4dcd3a9517 135 PANTHER PTHR10245 1 65 1.0E-20 T 25-04-2016 APQ13_RS05910 939831bd93280fdb9b943c4dcd3a9517 135 PANTHER PTHR10245:SF47 1 65 1.0E-20 T 25-04-2016 APQ13_RS04650 5f6c1c58dbace0b3c84c402e3a2b52cc 130 PANTHER PTHR30204 1 118 6.4E-42 T 25-04-2016 APQ13_RS04650 5f6c1c58dbace0b3c84c402e3a2b52cc 130 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.9E-15 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04650 5f6c1c58dbace0b3c84c402e3a2b52cc 130 SUPERFAMILY SSF46955 1 116 5.49E-30 T 25-04-2016 IPR009061 Putative DNA-binding domain APQ13_RS04650 5f6c1c58dbace0b3c84c402e3a2b52cc 130 SMART SM00422 1 70 1.7E-18 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APQ13_RS04650 5f6c1c58dbace0b3c84c402e3a2b52cc 130 PANTHER PTHR30204:SF2 1 118 6.4E-42 T 25-04-2016 APQ13_RS04650 5f6c1c58dbace0b3c84c402e3a2b52cc 130 Gene3D G3DSA:1.10.1660.10 1 119 1.8E-32 T 25-04-2016 APQ13_RS01565 38471cd2a7a9159efb4d57873b97ac7a 201 Pfam PF04229 GrpB protein 19 178 3.9E-45 T 25-04-2016 IPR007344 GrpB/Dephospho-CoA kinase APQ13_RS01565 38471cd2a7a9159efb4d57873b97ac7a 201 PANTHER PTHR34822 2 181 1.3E-42 T 25-04-2016 APQ13_RS01565 38471cd2a7a9159efb4d57873b97ac7a 201 Gene3D G3DSA:3.30.460.10 14 183 6.2E-53 T 25-04-2016 APQ13_RS01565 38471cd2a7a9159efb4d57873b97ac7a 201 SUPERFAMILY SSF81301 20 181 3.6E-48 T 25-04-2016 APQ13_RS04460 ebe61725f240a8ecc86a56b1b8fc16b9 130 Gene3D G3DSA:2.40.128.20 2 129 8.8E-22 T 25-04-2016 IPR012674 Calycin APQ13_RS04460 ebe61725f240a8ecc86a56b1b8fc16b9 130 Pfam PF09148 Domain of unknown function (DUF1934) 3 125 1.5E-19 T 25-04-2016 IPR015231 Protein of unknown function DUF1934 APQ13_RS04460 ebe61725f240a8ecc86a56b1b8fc16b9 130 SUPERFAMILY SSF50814 1 129 9.93E-34 T 25-04-2016 IPR011038 Calycin-like APQ13_RS01900 21f10f5603fa0c15c926917931d9f449 406 PRINTS PR00762 Chloride channel signature 317 337 8.7E-9 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01900 21f10f5603fa0c15c926917931d9f449 406 PRINTS PR00762 Chloride channel signature 345 361 8.7E-9 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01900 21f10f5603fa0c15c926917931d9f449 406 PRINTS PR00762 Chloride channel signature 154 173 8.7E-9 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01900 21f10f5603fa0c15c926917931d9f449 406 Pfam PF00654 Voltage gated chloride channel 63 393 2.7E-53 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01900 21f10f5603fa0c15c926917931d9f449 406 SUPERFAMILY SSF81340 11 402 1.57E-68 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APQ13_RS01900 21f10f5603fa0c15c926917931d9f449 406 Gene3D G3DSA:1.10.3080.10 22 399 9.0E-41 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APQ13_RS07680 e63d25ac9a100f7b053f8c2a042c0cc5 220 PANTHER PTHR37314:SF2 9 218 3.0E-29 T 25-04-2016 APQ13_RS07680 e63d25ac9a100f7b053f8c2a042c0cc5 220 PANTHER PTHR37314 9 218 3.0E-29 T 25-04-2016 APQ13_RS07680 e63d25ac9a100f7b053f8c2a042c0cc5 220 Pfam PF06912 Protein of unknown function (DUF1275) 14 210 2.3E-36 T 25-04-2016 IPR010699 Protein of unknown function DUF1275 APQ13_RS03005 ff2fa66d6d725ee4c3a509da3dfb0256 245 Pfam PF11750 Protein of unknown function (DUF3307) 16 136 6.0E-27 T 25-04-2016 IPR021737 Bacteriophage phiKZ, Orf197 APQ13_RS02890 cbbbb9fb5203caf00846f2c8c16a839c 325 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 321 1.1E-34 T 25-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APQ13_RS03170 58670f1859552d51ad31027e0086ca11 296 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 13 289 1.7E-73 T 25-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APQ13_RS03170 58670f1859552d51ad31027e0086ca11 296 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 9 291 1.1E-113 T 25-04-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APQ13_RS03170 58670f1859552d51ad31027e0086ca11 296 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 296 162.412 T 25-04-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APQ13_RS03170 58670f1859552d51ad31027e0086ca11 296 PANTHER PTHR30201 13 296 7.8E-72 T 25-04-2016 APQ13_RS02960 19f1d663ea55ddbd9d1e0cbf40668905 262 Pfam PF12679 ABC-2 family transporter protein 1 253 4.1E-15 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APQ13_RS03395 47e17af1d016e0e572e9149a9f20b309 299 SUPERFAMILY SSF88713 98 279 2.4E-37 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APQ13_RS03395 47e17af1d016e0e572e9149a9f20b309 299 PANTHER PTHR34216 23 294 2.2E-48 T 25-04-2016 APQ13_RS03395 47e17af1d016e0e572e9149a9f20b309 299 PANTHER PTHR34216:SF3 23 294 2.2E-48 T 25-04-2016 APQ13_RS03395 47e17af1d016e0e572e9149a9f20b309 299 Pfam PF01522 Polysaccharide deacetylase 136 257 1.6E-29 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APQ13_RS03395 47e17af1d016e0e572e9149a9f20b309 299 Gene3D G3DSA:3.20.20.370 109 258 8.1E-30 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APQ13_RS02210 b83fb39c79b876abac80827a062db24d 71 PANTHER PTHR36439 1 70 5.9E-24 T 25-04-2016 APQ13_RS02210 b83fb39c79b876abac80827a062db24d 71 PANTHER PTHR36439:SF1 1 70 5.9E-24 T 25-04-2016 APQ13_RS02210 b83fb39c79b876abac80827a062db24d 71 Gene3D G3DSA:3.30.70.1280 1 70 1.1E-26 T 25-04-2016 APQ13_RS02210 b83fb39c79b876abac80827a062db24d 71 Pfam PF08002 Protein of unknown function (DUF1697) 1 70 2.3E-25 T 25-04-2016 IPR012545 Protein of unknown function DUF1697 APQ13_RS02210 b83fb39c79b876abac80827a062db24d 71 SUPERFAMILY SSF160379 1 70 3.92E-26 T 25-04-2016 APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 PANTHER PTHR23026:SF101 131 219 5.4E-59 T 25-04-2016 APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 PANTHER PTHR23026:SF101 5 114 5.4E-59 T 25-04-2016 APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 Pfam PF00881 Nitroreductase family 16 199 1.4E-29 T 25-04-2016 IPR029479 Nitroreductase APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 PANTHER PTHR23026 131 219 5.4E-59 T 25-04-2016 APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 PANTHER PTHR23026 5 114 5.4E-59 T 25-04-2016 APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 SUPERFAMILY SSF55469 11 219 5.76E-52 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS00580 1d2f65fbc9080621647d45ef4e128f22 221 Gene3D G3DSA:3.40.109.10 7 219 1.9E-70 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS05425 da047c46feb79d547d9a923ce8c42bb6 102 SUPERFAMILY SSF52794 6 97 3.66E-16 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS05425 da047c46feb79d547d9a923ce8c42bb6 102 PANTHER PTHR33843 5 102 5.0E-13 T 25-04-2016 APQ13_RS05425 da047c46feb79d547d9a923ce8c42bb6 102 Gene3D G3DSA:3.40.50.270 7 96 1.4E-10 T 25-04-2016 APQ13_RS05425 da047c46feb79d547d9a923ce8c42bb6 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 92 6.1E-10 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APQ13_RS05425 da047c46feb79d547d9a923ce8c42bb6 102 PANTHER PTHR33843:SF2 5 102 5.0E-13 T 25-04-2016 APQ13_RS02190 4da2659ebd3e7a2de1a7dfa7a904e18e 267 Gene3D G3DSA:3.20.20.140 1 266 1.5E-60 T 25-04-2016 APQ13_RS02190 4da2659ebd3e7a2de1a7dfa7a904e18e 267 SUPERFAMILY SSF51556 1 264 4.33E-34 T 25-04-2016 IPR032466 Metal-dependent hydrolase APQ13_RS02190 4da2659ebd3e7a2de1a7dfa7a904e18e 267 Pfam PF04909 Amidohydrolase 71 264 1.8E-16 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APQ13_RS02190 4da2659ebd3e7a2de1a7dfa7a904e18e 267 PANTHER PTHR21240 63 263 5.5E-12 T 25-04-2016 APQ13_RS03340 6298c6fcc300a7104beaf6e7daf43e16 258 SUPERFAMILY SSF161098 5 248 2.8E-47 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03340 6298c6fcc300a7104beaf6e7daf43e16 258 Gene3D G3DSA:1.10.3720.10 3 257 2.9E-52 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03340 6298c6fcc300a7104beaf6e7daf43e16 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 248 4.3E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APQ13_RS03340 6298c6fcc300a7104beaf6e7daf43e16 258 PANTHER PTHR30222:SF1 3 256 3.8E-71 T 25-04-2016 APQ13_RS03340 6298c6fcc300a7104beaf6e7daf43e16 258 PANTHER PTHR30222 3 256 3.8E-71 T 25-04-2016 APQ13_RS06195 4a85c53bf557beac8d59c5ca68f78f27 173 Pfam PF04191 Phospholipid methyltransferase 87 156 3.8E-11 T 25-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 APQ13_RS04420 d72b6d3d2bb5496a0a28efa685f92b16 216 Pfam PF13346 ABC-2 family transporter protein 3 212 1.1E-29 T 25-04-2016 IPR025699 ABC-2 membrane transporter-like APQ13_RS00490 0ee77ec2b401c5ac2c56cbf993bec9b0 286 PANTHER PTHR37296 2 286 1.2E-99 T 25-04-2016 APQ13_RS00490 0ee77ec2b401c5ac2c56cbf993bec9b0 286 PIRSF PIRSF012524 1 285 3.1E-104 T 25-04-2016 IPR014464 Conserved virulence factor B APQ13_RS00490 0ee77ec2b401c5ac2c56cbf993bec9b0 286 Pfam PF13509 S1 domain 8 61 3.2E-10 T 25-04-2016 APQ13_RS00490 0ee77ec2b401c5ac2c56cbf993bec9b0 286 SUPERFAMILY SSF50249 147 218 1.47E-6 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold APQ13_RS08910 fcc4e28679834b9ace3297d1fd9aae6e 163 PANTHER PTHR30455:SF2 2 156 4.1E-66 T 25-04-2016 APQ13_RS08910 fcc4e28679834b9ace3297d1fd9aae6e 163 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 5.9E-58 T 25-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APQ13_RS08910 fcc4e28679834b9ace3297d1fd9aae6e 163 Pfam PF03477 ATP cone domain 50 136 6.8E-19 T 25-04-2016 IPR005144 ATP-cone domain APQ13_RS08910 fcc4e28679834b9ace3297d1fd9aae6e 163 PANTHER PTHR30455 2 156 4.1E-66 T 25-04-2016 APQ13_RS08910 fcc4e28679834b9ace3297d1fd9aae6e 163 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 81.811 T 25-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APQ13_RS01095 c220dbac7ea4c78bfd48d405df177aea 444 PANTHER PTHR38733:SF1 5 440 2.2E-46 T 25-04-2016 APQ13_RS01095 c220dbac7ea4c78bfd48d405df177aea 444 Pfam PF10117 McrBC 5-methylcytosine restriction system component 66 374 1.2E-71 T 25-04-2016 IPR019292 5-methylcytosine restriction system component APQ13_RS01095 c220dbac7ea4c78bfd48d405df177aea 444 PANTHER PTHR38733 5 440 2.2E-46 T 25-04-2016 APQ13_RS01405 a7a7bb40233413ebb9f3b84ce65c06a1 219 Pfam PF07314 Protein of unknown function (DUF1461) 7 180 6.2E-42 T 25-04-2016 IPR010178 Integral membrane protein 1906 APQ13_RS01405 a7a7bb40233413ebb9f3b84ce65c06a1 219 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 1 198 5.7E-51 T 25-04-2016 IPR010178 Integral membrane protein 1906 APQ13_RS02150 2062ad98816f15070ba374c0cf90e3e8 356 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 8 307 6.4E-49 T 25-04-2016 IPR010640 Low temperature requirement A APQ13_RS04670 4edcd2af1ccbb737328805db19e6a3c0 265 Pfam PF06541 Putative ABC-transporter type IV 10 159 7.0E-44 T 25-04-2016 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 APQ13_RS08075 6c1ee7e7692a28abbd4a787c06c2a16f 523 PIRSF PIRSF031639 1 523 1.3E-235 T 25-04-2016 IPR016978 Putative competence-induced protein Ccs4 APQ13_RS06025 45e0f5282e063b63450ab9b130180e10 412 PANTHER PTHR11986 22 314 1.6E-45 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APQ13_RS06025 45e0f5282e063b63450ab9b130180e10 412 SUPERFAMILY SSF53383 16 406 1.13E-62 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APQ13_RS06025 45e0f5282e063b63450ab9b130180e10 412 Gene3D G3DSA:3.40.640.10 70 312 1.4E-51 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APQ13_RS06025 45e0f5282e063b63450ab9b130180e10 412 Pfam PF00202 Aminotransferase class-III 16 404 5.0E-58 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APQ13_RS06025 45e0f5282e063b63450ab9b130180e10 412 Gene3D G3DSA:3.90.1150.10 18 53 4.4E-9 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS06025 45e0f5282e063b63450ab9b130180e10 412 Gene3D G3DSA:3.90.1150.10 319 405 4.4E-9 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APQ13_RS04855 1070cb86afca44f9756efe27ff0d132d 232 PANTHER PTHR31851 1 232 1.5E-55 T 25-04-2016 APQ13_RS04855 1070cb86afca44f9756efe27ff0d132d 232 Pfam PF01988 VIT family 20 227 2.0E-49 T 25-04-2016 IPR008217 Ccc1 family APQ13_RS04610 63a13de07adb30b496adcc5e610c8755 133 SUPERFAMILY SSF160631 19 130 2.22E-16 T 25-04-2016 APQ13_RS04610 63a13de07adb30b496adcc5e610c8755 133 Pfam PF14568 SMI1-KNR4 cell-wall 19 125 4.7E-12 T 25-04-2016 APQ13_RS04610 63a13de07adb30b496adcc5e610c8755 133 Gene3D G3DSA:3.40.1580.10 17 131 1.8E-12 T 25-04-2016 IPR018958 SMI1/KNR4-like domain APQ13_RS07740 b12770afbd5ae981eac78e393923efff 325 Gene3D G3DSA:1.10.260.40 3 82 3.0E-6 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS07740 b12770afbd5ae981eac78e393923efff 325 SUPERFAMILY SSF47413 3 63 8.28E-7 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS07740 b12770afbd5ae981eac78e393923efff 325 Pfam PF13413 Helix-turn-helix domain 8 65 2.7E-14 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS06960 ad332743b444b6bb44533f8632b98732 330 Pfam PF16169 Domain of unknown function (DUF4872) 154 324 8.6E-44 T 25-04-2016 IPR032369 Domain of unknown function DUF4872 APQ13_RS06960 ad332743b444b6bb44533f8632b98732 330 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 14 142 1.7E-38 T 25-04-2016 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019|UniPathway: UPA00964 APQ13_RS03905 f94f5f5882108a8ba8d707f47a47e860 195 Pfam PF06736 Protein of unknown function (DUF1211) 5 89 8.8E-23 T 25-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 APQ13_RS06440 4f3f8b8a624bab7e365eea08b945e09f 170 Pfam PF13787 Protein of unknown function with HXXEE motif 9 123 8.0E-18 T 25-04-2016 IPR025671 Protein of unknown function with HXXEE motif APQ13_RS08985 c535a50027b836cc416228e08c4c3975 62 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 8 22 0.0039 T 25-04-2016 IPR010133 Bacteriocin-type signal sequence APQ13_RS08985 c535a50027b836cc416228e08c4c3975 62 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 1 61 4.2E-9 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 APQ13_RS04255 514da44428938882dbee98e269f94f3e 163 Gene3D G3DSA:1.10.260.40 16 78 5.3E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APQ13_RS02950 0bc90b12d377d7193c4de5a2d075fcd9 148 Pfam PF11457 Protein of unknown function (DUF3021) 76 141 4.8E-8 T 25-04-2016 IPR021560 Protein of unknown function DUF3021 APQ13_RS08160 a51aabf98c86c9016c14d1625c9a9f82 767 Pfam PF02687 FtsX-like permease family 252 377 7.7E-12 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS08160 a51aabf98c86c9016c14d1625c9a9f82 767 Pfam PF02687 FtsX-like permease family 641 761 3.4E-13 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS05605 ecf67feba3d021d287e209af54aa0e6f 546 Hamap MF_01941 Mid-cell-anchored protein Z [mapZ]. 1 546 25.396 T 25-04-2016 IPR030858 Mid-cell-anchored protein Z GO:0016021|GO:0051301 APQ13_RS01760 a9d64a9fd22af3c267fcb3915e9da5c9 392 Pfam PF13535 ATP-grasp domain 151 291 6.4E-11 T 25-04-2016 APQ13_RS01760 a9d64a9fd22af3c267fcb3915e9da5c9 392 SUPERFAMILY SSF56059 91 318 2.65E-43 T 25-04-2016 APQ13_RS01760 a9d64a9fd22af3c267fcb3915e9da5c9 392 Gene3D G3DSA:3.30.470.20 111 311 7.7E-27 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APQ13_RS01905 7924139db896c092a6af7fbe587fe1f6 406 SUPERFAMILY SSF81340 12 404 1.57E-74 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APQ13_RS01905 7924139db896c092a6af7fbe587fe1f6 406 Gene3D G3DSA:1.10.3080.10 17 401 5.1E-40 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APQ13_RS01905 7924139db896c092a6af7fbe587fe1f6 406 Pfam PF00654 Voltage gated chloride channel 63 394 1.0E-57 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01905 7924139db896c092a6af7fbe587fe1f6 406 PRINTS PR00762 Chloride channel signature 345 361 3.1E-6 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01905 7924139db896c092a6af7fbe587fe1f6 406 PRINTS PR00762 Chloride channel signature 154 173 3.1E-6 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS01905 7924139db896c092a6af7fbe587fe1f6 406 PRINTS PR00762 Chloride channel signature 317 337 3.1E-6 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APQ13_RS08145 998f43726ebcf3024ab7389f34e6f562 341 PANTHER PTHR30106:SF1 6 341 3.6E-145 T 25-04-2016 APQ13_RS08145 998f43726ebcf3024ab7389f34e6f562 341 Pfam PF03601 Conserved hypothetical protein 698 10 319 2.8E-91 T 25-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APQ13_RS08145 998f43726ebcf3024ab7389f34e6f562 341 PANTHER PTHR30106 6 341 3.6E-145 T 25-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APQ13_RS02840 b9bf531e988b5de552e81d410381db54 507 Pfam PF00746 Gram positive anchor 465 504 1.6E-4 T 25-04-2016 IPR019948 Gram-positive anchor APQ13_RS02840 b9bf531e988b5de552e81d410381db54 507 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 471 504 9.1E-6 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain APQ13_RS02840 b9bf531e988b5de552e81d410381db54 507 TIGRFAM TIGR03726 strep_RK_lipo: putative cross-wall-targeting lipoprotein signal 4 38 3.3E-14 T 25-04-2016 IPR021197 Cross-wall-targeting lipoprotein motif APQ13_RS05720 76c1d6ac5f1c20e8f8295baa8e72608a 126 Pfam PF03413 Peptidase propeptide and YPEB domain 57 120 8.9E-11 T 25-04-2016 IPR025711 PepSY domain APQ13_RS06050 9c79b83c26b0ca1eee10237849a8a95b 237 Pfam PF12698 ABC-2 family transporter protein 51 227 3.0E-13 T 25-04-2016 APQ13_RS06895 ea7d70b424ecb2075da1ce3a4b3eb3c2 282 Gene3D G3DSA:3.40.50.1820 39 268 1.1E-70 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS06895 ea7d70b424ecb2075da1ce3a4b3eb3c2 282 SUPERFAMILY SSF53474 45 274 1.37E-11 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS06895 ea7d70b424ecb2075da1ce3a4b3eb3c2 282 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 34 270 1.0E-83 T 25-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like APQ13_RS07130 0e16489d8a736965f91471f9c2d9783f 280 SUPERFAMILY SSF53474 1 275 1.61E-90 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS07130 0e16489d8a736965f91471f9c2d9783f 280 PANTHER PTHR10061 1 277 2.3E-169 T 25-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APQ13_RS07130 0e16489d8a736965f91471f9c2d9783f 280 Pfam PF00756 Putative esterase 21 268 1.3E-64 T 25-04-2016 IPR000801 Putative esterase APQ13_RS07130 0e16489d8a736965f91471f9c2d9783f 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 272 2.4E-124 T 25-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APQ13_RS07130 0e16489d8a736965f91471f9c2d9783f 280 Gene3D G3DSA:3.40.50.1820 1 274 3.2E-81 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS07215 f84e779eeebbb45c92524d656bb4155f 154 Pfam PF07155 ECF-type riboflavin transporter, S component 5 151 9.2E-26 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 APQ13_RS03915 3d01416f0301cb08cc0cf81da3e0fdb5 393 PANTHER PTHR33393:SF2 53 292 1.5E-42 T 25-04-2016 APQ13_RS03915 3d01416f0301cb08cc0cf81da3e0fdb5 393 PANTHER PTHR33393 53 292 1.5E-42 T 25-04-2016 APQ13_RS03915 3d01416f0301cb08cc0cf81da3e0fdb5 393 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 49 295 7.2E-70 T 25-04-2016 IPR019079 Capsule synthesis protein, CapA APQ13_RS03915 3d01416f0301cb08cc0cf81da3e0fdb5 393 SUPERFAMILY SSF56300 49 313 5.26E-41 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS03915 3d01416f0301cb08cc0cf81da3e0fdb5 393 Gene3D G3DSA:3.60.21.10 64 390 9.9E-23 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like APQ13_RS03915 3d01416f0301cb08cc0cf81da3e0fdb5 393 SMART SM00854 48 295 1.3E-88 T 25-04-2016 IPR019079 Capsule synthesis protein, CapA APQ13_RS05050 3b4a8a25c40dc7ac22df3e983945360a 199 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 11 195 3.5E-63 T 25-04-2016 IPR018672 Protein of unknown function DUF2140 APQ13_RS09075 0a151c47e621ca257eaa45220ac50b89 101 SUPERFAMILY SSF102829 16 88 7.85E-5 T 25-04-2016 IPR007838 Cell division protein ZapA-like APQ13_RS05370 24d037775b6fe97e957349106128555f 179 PIRSF PIRSF004553 1 179 6.3E-59 T 25-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05370 24d037775b6fe97e957349106128555f 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 1.9E-52 T 25-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APQ13_RS05370 24d037775b6fe97e957349106128555f 179 PANTHER PTHR18895:SF60 14 179 1.5E-44 T 25-04-2016 APQ13_RS05370 24d037775b6fe97e957349106128555f 179 PANTHER PTHR18895 14 179 1.5E-44 T 25-04-2016 APQ13_RS05370 24d037775b6fe97e957349106128555f 179 Gene3D G3DSA:3.40.50.150 1 179 7.6E-61 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05370 24d037775b6fe97e957349106128555f 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APQ13_RS05370 24d037775b6fe97e957349106128555f 179 SUPERFAMILY SSF53335 1 178 1.92E-48 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APQ13_RS05370 24d037775b6fe97e957349106128555f 179 Pfam PF03602 Conserved hypothetical protein 95 1 177 2.5E-65 T 25-04-2016 APQ13_RS08960 56987c62852a4df4fc039ca24eebf54a 133 SUPERFAMILY SSF103473 12 130 3.27E-6 T 25-04-2016 IPR020846 Major facilitator superfamily domain APQ13_RS04310 dfe7a2fe466119dda420edacbc66778b 95 Pfam PF11674 Protein of unknown function (DUF3270) 6 89 7.1E-33 T 25-04-2016 IPR021688 Protein of unknown function DUF3270 APQ13_RS08980 9853e4090bd80b02c60a24d830e87332 70 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 57 1.1E-7 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 APQ13_RS05900 49d5206ca56d781c63afe9ce8bce61f5 199 Pfam PF07099 Protein of unknown function (DUF1361) 31 189 3.3E-35 T 25-04-2016 IPR009793 Protein of unknown function DUF1361 APQ13_RS06970 e6cebe5005dcbe178c1a9221c726e9ce 301 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 85 289 4.6E-64 T 25-04-2016 IPR018728 Domain of unknown function DUF2268 APQ13_RS05750 34ca0fbb01c4474742715ed67d8e405a 138 SUPERFAMILY SSF55961 1 136 4.12E-39 T 25-04-2016 APQ13_RS08325 996624fddf8a45828ee74a94758298f8 401 Pfam PF16873 Putative abortive phage resistance protein AbiGii toxin 3 391 1.2E-98 T 25-04-2016 IPR031707 Putative abortive phage resistance protein AbiGii toxin APQ13_RS01960 5962277199d46165f309bd0bae308ce2 574 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 6 568 27.119 T 25-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 APQ13_RS01960 5962277199d46165f309bd0bae308ce2 574 PANTHER PTHR41314 3 574 2.0E-149 T 25-04-2016 APQ13_RS01960 5962277199d46165f309bd0bae308ce2 574 Pfam PF06160 Septation ring formation regulator, EzrA 8 565 1.4E-185 T 25-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 APQ13_RS05320 9b4ef742e9728dc6c80d338bf6d43c52 344 Gene3D G3DSA:3.40.50.720 4 139 6.4E-20 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05320 9b4ef742e9728dc6c80d338bf6d43c52 344 SUPERFAMILY SSF51735 5 142 1.14E-16 T 25-04-2016 IPR016040 NAD(P)-binding domain APQ13_RS05320 9b4ef742e9728dc6c80d338bf6d43c52 344 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 11 103 2.8E-10 T 25-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APQ13_RS06395 05d00c0e0ea4e0d9bdcc21779fc998c8 72 Pfam PF03047 COMC family 1 24 1.5E-5 T 25-04-2016 IPR004288 Competence protein, ComC GO:0005186 APQ13_RS03425 d552c11eb7b8edb99a3b93c2c6e3bb4d 177 Pfam PF07155 ECF-type riboflavin transporter, S component 6 168 2.4E-15 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 APQ13_RS02065 4616bea413ac021337399532ed3b5151 178 SUPERFAMILY SSF116734 2 176 2.29E-25 T 25-04-2016 APQ13_RS02065 4616bea413ac021337399532ed3b5151 178 Pfam PF01420 Type I restriction modification DNA specificity domain 3 175 2.6E-16 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APQ13_RS02375 fc4d426bbd523d266fad9ba7999f2a0a 206 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 47 205 8.7E-76 T 25-04-2016 IPR024418 Protein of unknown function DUF3862 APQ13_RS05800 a0b3ce6b8a2232ccf899b495a74971de 67 Pfam PF00403 Heavy-metal-associated domain 4 62 1.0E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APQ13_RS05800 a0b3ce6b8a2232ccf899b495a74971de 67 Gene3D G3DSA:3.30.70.100 2 62 1.7E-15 T 25-04-2016 APQ13_RS05800 a0b3ce6b8a2232ccf899b495a74971de 67 SUPERFAMILY SSF55008 1 63 3.01E-13 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APQ13_RS02410 40dae53414b29967a1f50881cc64c0b2 80 Pfam PF04226 Transglycosylase associated protein 33 77 9.4E-10 T 25-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 APQ13_RS08225 5c797555c1d3aaa1a4d6485575383160 568 Pfam PF02687 FtsX-like permease family 444 555 1.3E-7 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS05195 3ae30d4d10b4b5ed8495c65b8090c168 86 Pfam PF02325 YGGT family 13 81 1.2E-16 T 25-04-2016 IPR003425 CCB3/YggT GO:0016020 APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 SUPERFAMILY SSF53474 30 234 1.99E-36 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 SUPERFAMILY SSF53474 268 370 1.99E-36 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 Gene3D G3DSA:3.40.50.1820 105 371 7.1E-36 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 PANTHER PTHR17630 129 232 7.7E-12 T 25-04-2016 APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 PANTHER PTHR17630 306 340 7.7E-12 T 25-04-2016 APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 PANTHER PTHR17630:SF54 129 232 7.7E-12 T 25-04-2016 APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 PANTHER PTHR17630:SF54 306 340 7.7E-12 T 25-04-2016 APQ13_RS01940 bf98668942f4931531ffdbe8bc0921d8 372 Pfam PF00561 alpha/beta hydrolase fold 143 339 1.1E-9 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APQ13_RS08185 3911170380c7ad6b94cf7f79c4ec78c3 773 PANTHER PTHR30287 1 773 6.0E-31 T 25-04-2016 APQ13_RS08185 3911170380c7ad6b94cf7f79c4ec78c3 773 Pfam PF02687 FtsX-like permease family 650 765 4.1E-11 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS08185 3911170380c7ad6b94cf7f79c4ec78c3 773 Pfam PF02687 FtsX-like permease family 261 379 1.5E-10 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APQ13_RS04605 ea1d8bf5cc662ee0f353d21c1cd1506a 165 Pfam PF03692 Putative zinc- or iron-chelating domain 52 140 1.4E-15 T 25-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APQ13_RS05170 5764bb2e5ad16d16e316ede54f2b5cc6 100 Gene3D G3DSA:3.40.1720.10 1 98 3.9E-43 T 25-04-2016 APQ13_RS05170 5764bb2e5ad16d16e316ede54f2b5cc6 100 Pfam PF08860 Domain of unknown function (DUF1827) 1 97 2.1E-37 T 25-04-2016 IPR014959 Protein of unknown function DUF1827 APQ13_RS00930 e3aba73b969c8d8ceb1a5324b46f9b96 77 Pfam PF06612 Protein of unknown function (DUF1146) 14 63 2.9E-13 T 25-04-2016 IPR009526 Protein of unknown function DUF1146 APQ13_RS00930 e3aba73b969c8d8ceb1a5324b46f9b96 77 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 8 76 3.7E-21 T 25-04-2016 IPR009526 Protein of unknown function DUF1146 APQ13_RS02560 5a7d5a1e634f56acfbd0ba4c9934db03 77 Pfam PF08984 Domain of unknown function (DUF1858) 5 62 2.1E-17 T 25-04-2016 IPR015077 Domain of unknown function DUF1858 APQ13_RS02560 5a7d5a1e634f56acfbd0ba4c9934db03 77 SUPERFAMILY SSF140683 1 76 1.31E-20 T 25-04-2016 APQ13_RS02560 5a7d5a1e634f56acfbd0ba4c9934db03 77 Gene3D G3DSA:1.10.3910.10 1 76 1.5E-32 T 25-04-2016 IPR015077 Domain of unknown function DUF1858 APQ13_RS01115 031688e7f417ab9d92130e0f281965c3 58 Pfam PF11240 Protein of unknown function (DUF3042) 5 56 1.3E-22 T 25-04-2016 IPR021402 Protein of unknown function DUF3042 APQ13_RS08640 35b4cbda6d3dcf279d5af0551e6db744 97 Pfam PF11773 Type II secretory pathway pseudopilin 13 94 2.0E-33 T 25-04-2016 IPR021749 Type II secretory pathway pseudopilin APQ13_RS08640 35b4cbda6d3dcf279d5af0551e6db744 97 Gene3D G3DSA:3.60.20.10 37 90 4.3E-4 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APQ13_RS05775 c18f21cf4def85e31a8c019041b78076 152 Pfam PF04397 LytTr DNA-binding domain 54 150 4.7E-20 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS05775 c18f21cf4def85e31a8c019041b78076 152 Gene3D G3DSA:2.40.50.40 46 114 1.8E-14 T 25-04-2016 APQ13_RS05775 c18f21cf4def85e31a8c019041b78076 152 SMART SM00850 54 151 7.6E-21 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APQ13_RS05405 0fbcf41c4a3a0aac3b2c3769b631f388 203 Gene3D G3DSA:3.40.50.300 4 136 5.3E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05405 0fbcf41c4a3a0aac3b2c3769b631f388 203 SUPERFAMILY SSF52540 4 129 4.94E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APQ13_RS05405 0fbcf41c4a3a0aac3b2c3769b631f388 203 Pfam PF13671 AAA domain 5 130 2.8E-8 T 25-04-2016 APQ13_RS04305 31d1b62e0ea327813d708f386ca6a3de 308 Pfam PF01136 Peptidase family U32 74 304 4.1E-42 T 25-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APQ13_RS04305 31d1b62e0ea327813d708f386ca6a3de 308 PANTHER PTHR30217:SF7 1 307 2.6E-144 T 25-04-2016 APQ13_RS04305 31d1b62e0ea327813d708f386ca6a3de 308 PANTHER PTHR30217 1 307 2.6E-144 T 25-04-2016 APQ13_RS06745 78337a40af69d59e58ee4d44abe973b9 182 Pfam PF13612 Transposase DDE domain 9 157 2.3E-19 T 25-04-2016 IPR025668 Transposase DDE domain APQ13_RS04970 846341a50172ad009c42d63e7375104a 227 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 19 211 1.6E-33 T 25-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 APQ13_RS04970 846341a50172ad009c42d63e7375104a 227 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 17 215 4.1E-24 T 25-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 APQ13_RS05770 46a5160d5d814f182f9d348d88c6c1bf 132 Pfam PF11457 Protein of unknown function (DUF3021) 1 124 9.5E-27 T 25-04-2016 IPR021560 Protein of unknown function DUF3021 APQ13_RS09080 90d2d3aaf26ba6d8e9bb19c475fe4cc0 181 Pfam PF02674 Colicin V production protein 2 162 5.5E-22 T 25-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APQ13_RS01075 517bbe33be95c0bbb45fd7c3ff6c0617 89 Pfam PF13024 Protein of unknown function (DUF3884) 17 88 1.1E-32 T 25-04-2016 IPR024979 Protein of unknown function DUF3884 APQ13_RS08045 c7dc63f65c25b8592b5287ab7a31ebac 148 Pfam PF11457 Protein of unknown function (DUF3021) 5 145 3.3E-27 T 25-04-2016 IPR021560 Protein of unknown function DUF3021 APQ13_RS09130 0537def7371ef60d164934217ff3eb5d 239 Pfam PF05857 TraX protein 4 232 1.2E-23 T 25-04-2016 IPR008875 TraX APQ13_RS06490 d3fd1f322ca4fb9cf744e3c2b3a55ed1 300 Pfam PF13437 HlyD family secretion protein 160 272 3.0E-17 T 25-04-2016 APQ13_RS03620 36d93d402a908024ffe36ac1b7f468a7 168 Pfam PF03729 Short repeat of unknown function (DUF308) 64 111 0.0012 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane APQ13_RS03620 36d93d402a908024ffe36ac1b7f468a7 168 Pfam PF03729 Short repeat of unknown function (DUF308) 7 76 2.7E-11 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane APQ13_RS08570 8dfbe85d8fd7031adef59746251b8dad 160 SUPERFAMILY SSF88946 3 91 7.59E-6 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APQ13_RS05040 efff1fefea054fbc1974c634aea8f47e 372 Gene3D G3DSA:3.40.109.10 44 105 1.7E-11 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS05040 efff1fefea054fbc1974c634aea8f47e 372 Gene3D G3DSA:3.40.109.10 275 369 1.7E-11 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 APQ13_RS06990 3c9753db13b4cc41325b80ce6344d0cc 246 Pfam PF07179 SseB protein N-terminal domain 144 241 4.0E-6 T 25-04-2016 IPR009839 SseB protein N-terminal domain APQ13_RS08950 9f72cbb9c238ecb65777457adf8bf7de 46 Pfam PF03047 COMC family 1 32 3.1E-12 T 25-04-2016 IPR004288 Competence protein, ComC GO:0005186 APQ13_RS02575 101b73a3c34d8815c8c705960e1f3368 246 Pfam PF12730 ABC-2 family transporter protein 6 174 2.2E-13 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APQ13_RS04615 9244a84794daca8a8426960bdce586b8 229 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 147 222 1.7E-30 T 25-04-2016 IPR026834 LHH APQ13_RS07395 3a49076c07182d32bf01bab122d3585d 169 Pfam PF13787 Protein of unknown function with HXXEE motif 8 120 2.0E-17 T 25-04-2016 IPR025671 Protein of unknown function with HXXEE motif APQ13_RS05815 bd2683f562808e5ddcc390f431d49b9e 76 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 70 1.8E-16 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742