locus-tag class description SMU_01 PF08299 Bacterial dnaA protein helix-turn-helix SMU_01 PF00308 Bacterial dnaA protein SMU_02 PF02768 DNA polymerase III beta subunit, C-terminal domain SMU_02 PF02767 DNA polymerase III beta subunit, central domain SMU_02 PF00712 DNA polymerase III beta subunit, N-terminal domain SMU_06 PF06071 Protein of unknown function (DUF933) SMU_06 PF01926 50S ribosome-binding GTPase SMU_07 PF01195 Peptidyl-tRNA hydrolase SMU_08 PF03461 TRCF domain SMU_08 PF02559 CarD-like/TRCF domain SMU_08 PF00270 DEAD/DEAH box helicase SMU_08 PF00271 Helicase conserved C-terminal domain SMU_08 PF17757 UvrB interaction domain SMU_09 PF01479 S4 domain SMU_1001 PF18255 DNA processing protein A sterile alpha motif domain SMU_1001 PF02481 DNA recombination-mediator protein A SMU_1002 PF01131 DNA topoisomerase SMU_1002 PF01751 Toprim domain SMU_1002 PF01396 Topoisomerase DNA binding C4 zinc finger SMU_1003 PF01134 Glucose inhibited division protein A SMU_1004 PF02324 Glycosyl hydrolase family 70 SMU_1004 PF01473 Putative cell wall binding repeat SMU_1005 PF01473 Putative cell wall binding repeat SMU_1005 PF02324 Glycosyl hydrolase family 70 SMU_1006 PF00005 ABC transporter SMU_1008 PF00072 Response regulator receiver domain SMU_1008 PF00486 Transcriptional regulatory protein, C terminal SMU_1009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_101 PF03609 PTS system sorbose-specific iic component SMU_1010 PF08218 Citrate lyase ligase C-terminal domain SMU_1011 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SMU_1013c PF03600 Citrate transporter SMU_1016 PF00364 Biotin-requiring enzyme SMU_1017 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SMU_1019 PF06857 Malonate decarboxylase delta subunit (MdcD) SMU_1020 PF03328 HpcH/HpaI aldolase/citrate lyase family SMU_1021 PF04223 Citrate lyase, alpha subunit (CitF) SMU_1022 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SMU_1023 PF00364 Biotin-requiring enzyme SMU_1023 PF02436 Conserved carboxylase domain SMU_1023 PF00682 HMGL-like SMU_1024c PF13333 Integrase core domain SMU_1024c PF00665 Integrase core domain SMU_1031 PF09035 Excisionase from transposon Tn916 SMU_1032 PF02920 DNA binding domain of tn916 integrase SMU_1032 PF00589 Phage integrase family SMU_1034c PF00589 Phage integrase family SMU_1034c PF13495 Phage integrase, N-terminal SAM-like domain SMU_1035 PF00005 ABC transporter SMU_1037c PF00512 His Kinase A (phospho-acceptor) domain SMU_1037c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1038c PF00486 Transcriptional regulatory protein, C terminal SMU_1038c PF00072 Response regulator receiver domain SMU_1039c PF08437 Glycosyl transferase family 8 C-terminal SMU_1039c PF01501 Glycosyl transferase family 8 SMU_104 PF16338 Domain of unknown function (DUF4968) SMU_104 PF17137 Domain of unknown function (DUF5110) SMU_104 PF13802 Galactose mutarotase-like SMU_104 PF01055 Glycosyl hydrolases family 31 SMU_1040c PF00106 short chain dehydrogenase SMU_1041 PF00005 ABC transporter SMU_1043c PF01515 Phosphate acetyl/butaryl transferase SMU_1044c PF00849 RNA pseudouridylate synthase SMU_1045c PF01513 ATP-NAD kinase SMU_1046c PF04607 Region found in RelA / SpoT proteins SMU_1048 PF01928 CYTH domain SMU_105 PF13407 Periplasmic binding protein domain SMU_105 PF00356 Bacterial regulatory proteins, lacI family SMU_1050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMU_1050 PF14572 Phosphoribosyl synthetase-associated domain SMU_1051 PF00266 Aminotransferase class-V SMU_1053 PF06971 Putative DNA-binding protein N-terminus SMU_1053 PF02629 CoA binding domain SMU_1054 PF07722 Peptidase C26 SMU_1055 PF04002 RadC-like JAB domain SMU_1060 PF02881 SRP54-type protein, helical bundle domain SMU_1060 PF02978 Signal peptide binding domain SMU_1060 PF00448 SRP54-type protein, GTPase domain SMU_1061 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SMU_1062 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1063 PF00005 ABC transporter SMU_1063 PF00571 CBS domain SMU_1065c PF07702 UTRA domain SMU_1065c PF00392 Bacterial regulatory proteins, gntR family SMU_1066 PF02540 NAD synthase SMU_1066 PF00117 Glutamine amidotransferase class-I SMU_1066 PF00958 GMP synthase C terminal domain SMU_1068c PF13732 Domain of unknown function (DUF4162) SMU_1068c PF00005 ABC transporter SMU_1073 PF01268 Formate--tetrahydrofolate ligase SMU_1075 PF02441 Flavoprotein SMU_1076 PF12822 ECF transporter, substrate-specific component SMU_1077 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMU_1077 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMU_1077 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMU_1077 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMU_1078c PF00664 ABC transporter transmembrane region SMU_1078c PF00005 ABC transporter SMU_1079c PF00664 ABC transporter transmembrane region SMU_1079c PF00005 ABC transporter SMU_1082 PF00464 Serine hydroxymethyltransferase SMU_1083c PF01300 Telomere recombination SMU_1083c PF03481 Putative GTP-binding controlling metal-binding SMU_1084 PF05175 Methyltransferase small domain SMU_1085 PF00472 RF-1 domain SMU_1085 PF03462 PCRF domain SMU_1086 PF00265 Thymidine kinase SMU_1087 PF01361 Tautomerase enzyme SMU_1088 PF02424 ApbE family SMU_1089 PF00890 FAD binding domain SMU_1089 PF03358 NADPH-dependent FMN reductase SMU_1089 PF04205 FMN-binding domain SMU_1090 PF04205 FMN-binding domain SMU_1090 PF00890 FAD binding domain SMU_1090 PF03358 NADPH-dependent FMN reductase SMU_1093 PF12704 MacB-like periplasmic core domain SMU_1093 PF02687 FtsX-like permease family SMU_1094 PF00005 ABC transporter SMU_1095 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1096 PF00571 CBS domain SMU_1096 PF00005 ABC transporter SMU_1098c PF00107 Zinc-binding dehydrogenase SMU_1098c PF08240 Alcohol dehydrogenase GroES-like domain SMU_110 PF01381 Helix-turn-helix SMU_1100c PF01594 AI-2E family transporter SMU_1102 PF00232 Glycosyl hydrolase family 1 SMU_1104c PF00300 Histidine phosphatase superfamily (branch 1) SMU_1105c PF00300 Histidine phosphatase superfamily (branch 1) SMU_1106c PF00300 Histidine phosphatase superfamily (branch 1) SMU_1112c PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMU_1113 PF04203 Sortase domain SMU_1114 PF00521 DNA gyrase/topoisomerase IV, subunit A SMU_1114 PF03989 DNA gyrase C-terminal domain, beta-propeller SMU_1115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SMU_1115 PF00056 lactate/malate dehydrogenase, NAD binding domain SMU_1117 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_1117 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_1118c PF02653 Branched-chain amino acid transport system / permease component SMU_1119c PF02653 Branched-chain amino acid transport system / permease component SMU_1120 PF00005 ABC transporter SMU_1121c PF02608 ABC transporter substrate-binding protein PnrA-like SMU_1122 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMU_1123 PF01791 DeoC/LacD family aldolase SMU_1124 PF02885 Glycosyl transferase family, helical bundle domain SMU_1124 PF00591 Glycosyl transferase family, a/b domain SMU_1124 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SMU_1125c PF05175 Methyltransferase small domain SMU_1126 PF00485 Phosphoribulokinase / Uridine kinase family SMU_1127 PF01649 Ribosomal protein S20 SMU_1128 PF00512 His Kinase A (phospho-acceptor) domain SMU_1128 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1129 PF00486 Transcriptional regulatory protein, C terminal SMU_1129 PF00072 Response regulator receiver domain SMU_113 PF00294 pfkB family carbohydrate kinase SMU_1132 PF11838 ERAP1-like C-terminal domain SMU_1132 PF01433 Peptidase family M1 domain SMU_1133 PF01895 PhoU domain SMU_1134c PF00005 ABC transporter SMU_1135 PF00005 ABC transporter SMU_1136 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1137 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1138 PF12849 PBP superfamily domain SMU_1139c PF01189 16S rRNA methyltransferase RsmB/F SMU_1139c PF17126 RsmF rRNA methyltransferase first C-terminal domain SMU_1139c PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SMU_114 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_114 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1140c PF00459 Inositol monophosphatase family SMU_1141c PF05256 Uncharacterised protein family (UPF0223) SMU_1142c PF03960 ArsC family SMU_1143c PF06574 FAD synthetase SMU_1143c PF01687 Riboflavin kinase SMU_1144 PF01509 TruB family pseudouridylate synthase (N terminal domain) SMU_1144 PF16198 tRNA pseudouridylate synthase B C-terminal domain SMU_1145c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1145c PF00512 His Kinase A (phospho-acceptor) domain SMU_1146c PF00486 Transcriptional regulatory protein, C terminal SMU_1146c PF00072 Response regulator receiver domain SMU_1148 PF00005 ABC transporter SMU_115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_116 PF01791 DeoC/LacD family aldolase SMU_1163c PF00664 ABC transporter transmembrane region SMU_1163c PF00005 ABC transporter SMU_1164c PF08021 Siderophore-interacting FAD-binding domain SMU_1164c PF00664 ABC transporter transmembrane region SMU_1164c PF00005 ABC transporter SMU_1164c PF04954 Siderophore-interacting protein SMU_1167c PF00005 ABC transporter SMU_1169c PF00578 AhpC/TSA family SMU_1170 PF02683 Cytochrome C biogenesis protein transmembrane region SMU_1173 PF01053 Cys/Met metabolism PLP-dependent enzyme SMU_1174 PF13361 UvrD-like helicase C-terminal domain SMU_1174 PF00580 UvrD/REP helicase N-terminal domain SMU_1175 PF01235 Sodium:alanine symporter family SMU_1176 PF16916 Dimerisation domain of Zinc Transporter SMU_1176 PF01545 Cation efflux family SMU_1177c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1178c PF00005 ABC transporter SMU_1179c PF00528 Binding-protein-dependent transport system inner membrane component SMU_1180 PF03831 PhnA domain SMU_1180 PF08274 PhnA Zinc-Ribbon SMU_1182 PF08125 Mannitol dehydrogenase C-terminal domain SMU_1182 PF01232 Mannitol dehydrogenase Rossmann domain SMU_1183 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1184c PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1184c PF08279 HTH domain SMU_1184c PF05043 Mga helix-turn-helix domain SMU_1185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1185 PF02378 Phosphotransferase system, EIIC SMU_1187 PF01380 SIS domain SMU_1189c PF04226 Transglycosylase associated protein SMU_118c PF00756 Putative esterase SMU_119 PF08240 Alcohol dehydrogenase GroES-like domain SMU_119 PF00107 Zinc-binding dehydrogenase SMU_1190 PF00224 Pyruvate kinase, barrel domain SMU_1190 PF02887 Pyruvate kinase, alpha/beta domain SMU_1191 PF00365 Phosphofructokinase SMU_1192 PF14579 Helix-hairpin-helix motif SMU_1192 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMU_1192 PF01336 OB-fold nucleic acid binding domain SMU_1192 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMU_1192 PF02811 PHP domain SMU_1193 PF00392 Bacterial regulatory proteins, gntR family SMU_1194 PF00005 ABC transporter SMU_120 PF00830 Ribosomal L28 family SMU_1200 PF00575 S1 RNA binding domain SMU_1203 PF01063 Amino-transferase class IV SMU_1204 PF00521 DNA gyrase/topoisomerase IV, subunit A SMU_1204 PF03989 DNA gyrase C-terminal domain, beta-propeller SMU_1207 PF02661 Fic/DOC family SMU_121 PF01554 MatE SMU_1210 PF00986 DNA gyrase B subunit, carboxyl terminus SMU_1210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1210 PF00204 DNA gyrase B SMU_1210 PF01751 Toprim domain SMU_1211 PF02660 Glycerol-3-phosphate acyltransferase SMU_1213c PF02872 5'-nucleotidase, C-terminal domain SMU_1213c PF00149 Calcineurin-like phosphoesterase SMU_1214 PF01979 Amidohydrolase family SMU_1215 PF03167 Uracil DNA glycosylase superfamily SMU_1216c PF00528 Binding-protein-dependent transport system inner membrane component SMU_1217c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1218 PF01425 Amidase SMU_1219c PF04237 YjbR SMU_1220c PF01161 Phosphatidylethanolamine-binding protein SMU_1221 PF00156 Phosphoribosyl transferase domain SMU_1222 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMU_1223 PF01180 Dihydroorotate dehydrogenase SMU_1224 PF00970 Oxidoreductase FAD-binding domain SMU_1224 PF00175 Oxidoreductase NAD-binding domain SMU_1224 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SMU_1225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_1225 PF03466 LysR substrate binding domain SMU_1227 PF01048 Phosphorylase superfamily SMU_1228c PF00117 Glutamine amidotransferase class-I SMU_1229 PF01048 Phosphorylase superfamily SMU_123 PF11490 DNA polymerase III polC-type N-terminus II SMU_123 PF14480 DNA polymerase III polC-type N-terminus I SMU_123 PF02811 PHP domain SMU_123 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMU_123 PF14579 Helix-hairpin-helix motif SMU_123 PF00929 Exonuclease SMU_123 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMU_1233 PF01676 Metalloenzyme superfamily SMU_1234 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SMU_1235 PF01926 50S ribosome-binding GTPase SMU_1235 PF12631 MnmE helical domain SMU_1235 PF10396 GTP-binding protein TrmE N-terminus SMU_1238c PF03167 Uracil DNA glycosylase superfamily SMU_1239 PF01546 Peptidase family M20/M25/M40 SMU_124 PF01047 MarR family SMU_1240c PF00881 Nitroreductase family SMU_1241 PF08459 UvrC Helix-hairpin-helix N-terminal SMU_1241 PF02151 UvrB/uvrC motif SMU_1241 PF01541 GIY-YIG catalytic domain SMU_1245c PF13419 Haloacid dehalogenase-like hydrolase SMU_1247 PF03952 Enolase, N-terminal domain SMU_1247 PF00113 Enolase, C-terminal TIM barrel domain SMU_125 PF02525 Flavodoxin-like fold SMU_1252 PF02595 Glycerate kinase family SMU_1254 PF13419 Haloacid dehalogenase-like hydrolase SMU_1260c PF05103 DivIVA protein SMU_1261c PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SMU_1263 PF01502 Phosphoribosyl-AMP cyclohydrolase SMU_1264 PF00977 Histidine biosynthesis protein SMU_1265 PF00977 Histidine biosynthesis protein SMU_1266 PF00117 Glutamine amidotransferase class-I SMU_1268 PF00475 Imidazoleglycerol-phosphate dehydratase SMU_127 PF00676 Dehydrogenase E1 component SMU_1270 PF00815 Histidinol dehydrogenase SMU_1271 PF01634 ATP phosphoribosyltransferase SMU_1272 PF13393 Histidyl-tRNA synthetase SMU_1273 PF00155 Aminotransferase class I and II SMU_1276c PF06160 Septation ring formation regulator, EzrA SMU_1277 PF00986 DNA gyrase B subunit, carboxyl terminus SMU_1277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1277 PF00204 DNA gyrase B SMU_1277 PF01751 Toprim domain SMU_1279c PF01098 Cell cycle protein SMU_128 PF02779 Transketolase, pyrimidine binding domain SMU_128 PF02780 Transketolase, C-terminal domain SMU_128 PF00364 Biotin-requiring enzyme SMU_1286c PF07690 Major Facilitator Superfamily SMU_1288 PF01245 Ribosomal protein L19 SMU_1289c PF00654 Voltage gated chloride channel SMU_129 PF02817 e3 binding domain SMU_129 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMU_129 PF00364 Biotin-requiring enzyme SMU_1290c PF00654 Voltage gated chloride channel SMU_1291c PF01817 Chorismate mutase type II SMU_1291c PF00800 Prephenate dehydratase SMU_1293c PF01458 Uncharacterized protein family (UPF0051) SMU_1294 PF00258 Flavodoxin SMU_1295 PF00962 Adenosine/AMP deaminase SMU_1296 PF02798 Glutathione S-transferase, N-terminal domain SMU_1297 PF01368 DHH family SMU_1297 PF02272 DHHA1 domain SMU_1298 PF01197 Ribosomal protein L31 SMU_13 PF01171 PP-loop family SMU_130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_1301c PF13649 Methyltransferase domain SMU_1302 PF01297 Zinc-uptake complex component A periplasmic SMU_1302 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SMU_1303c PF03577 Peptidase family C69 SMU_1304c PF02650 WhiA C-terminal HTH domain SMU_1304c PF14527 WhiA LAGLIDADG-like domain SMU_1304c PF10298 WhiA N-terminal LAGLIDADG-like domain SMU_1305c PF01933 Uncharacterised protein family UPF0052 SMU_1306c PF03668 P-loop ATPase protein family SMU_1308 PF01042 Endoribonuclease L-PSP SMU_1309c PF00465 Iron-containing alcohol dehydrogenase SMU_131 PF10437 Bacterial lipoate protein ligase C-terminus SMU_131 PF03099 Biotin/lipoate A/B protein ligase family SMU_1311 PF01336 OB-fold nucleic acid binding domain SMU_1311 PF00152 tRNA synthetases class II (D, K and N) SMU_1312 PF00155 Aminotransferase class I and II SMU_1313c PF04851 Type III restriction enzyme, res subunit SMU_1313c PF13307 Helicase C-terminal domain SMU_1313c PF00929 Exonuclease SMU_1315c PF00005 ABC transporter SMU_132 PF01546 Peptidase family M20/M25/M40 SMU_132 PF07687 Peptidase dimerisation domain SMU_1321c PF01820 D-ala D-ala ligase N-terminus SMU_1321c PF07478 D-ala D-ala ligase C-terminus SMU_1323 PF00753 Metallo-beta-lactamase superfamily SMU_1324 PF18075 FtsX extracellular domain SMU_1324 PF02687 FtsX-like permease family SMU_1325 PF00005 ABC transporter SMU_1326 PF00472 RF-1 domain SMU_1326 PF03462 PCRF domain SMU_1327c PF08331 Domain of unknown function (DUF1730) SMU_1330c PF13683 Integrase core domain SMU_1330c PF01610 Transposase SMU_1334 PF01648 4'-phosphopantetheinyl transferase superfamily SMU_1335c PF03060 Nitronate monooxygenase SMU_1339 PF00975 Thioesterase domain SMU_1339 PF00550 Phosphopantetheine attachment site SMU_1339 PF00668 Condensation domain SMU_1339 PF13193 AMP-binding enzyme C-terminal domain SMU_1339 PF00501 AMP-binding enzyme SMU_133c PF07690 Major Facilitator Superfamily SMU_134 PF00440 Bacterial regulatory proteins, tetR family SMU_1340 PF00668 Condensation domain SMU_1340 PF00550 Phosphopantetheine attachment site SMU_1340 PF13193 AMP-binding enzyme C-terminal domain SMU_1340 PF00501 AMP-binding enzyme SMU_1341c PF00550 Phosphopantetheine attachment site SMU_1341c PF00668 Condensation domain SMU_1341c PF00975 Thioesterase domain SMU_1341c PF00501 AMP-binding enzyme SMU_1341c PF13193 AMP-binding enzyme C-terminal domain SMU_1342 PF00550 Phosphopantetheine attachment site SMU_1342 PF00668 Condensation domain SMU_1342 PF00501 AMP-binding enzyme SMU_1342 PF13193 AMP-binding enzyme C-terminal domain SMU_1343c PF00109 Beta-ketoacyl synthase, N-terminal domain SMU_1343c PF00202 Aminotransferase class-III SMU_1343c PF00668 Condensation domain SMU_1343c PF13193 AMP-binding enzyme C-terminal domain SMU_1343c PF00550 Phosphopantetheine attachment site SMU_1343c PF00501 AMP-binding enzyme SMU_1343c PF02801 Beta-ketoacyl synthase, C-terminal domain SMU_1343c PF16197 Ketoacyl-synthetase C-terminal extension SMU_1345c PF13193 AMP-binding enzyme C-terminal domain SMU_1345c PF00668 Condensation domain SMU_1345c PF00501 AMP-binding enzyme SMU_1345c PF00202 Aminotransferase class-III SMU_1345c PF16197 Ketoacyl-synthetase C-terminal extension SMU_1345c PF00109 Beta-ketoacyl synthase, N-terminal domain SMU_1345c PF02801 Beta-ketoacyl synthase, C-terminal domain SMU_1345c PF00550 Phosphopantetheine attachment site SMU_1348c PF00005 ABC transporter SMU_135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_135 PF03466 LysR substrate binding domain SMU_1353 PF13333 Integrase core domain SMU_1353 PF00665 Integrase core domain SMU_1353 PF13276 HTH-like domain SMU_1361c PF00440 Bacterial regulatory proteins, tetR family SMU_1361c PF16295 Tetracyclin repressor-like, C-terminal domain SMU_1363c PF01797 Transposase IS200 like SMU_1366c PF00005 ABC transporter SMU_1367c PF13649 Methyltransferase domain SMU_137 PF00390 Malic enzyme, N-terminal domain SMU_137 PF03949 Malic enzyme, NAD binding domain SMU_1370c PF00665 Integrase core domain SMU_1370c PF13333 Integrase core domain SMU_1370c PF13276 HTH-like domain SMU_1375c PF13673 Acetyltransferase (GNAT) domain SMU_1375c PF04229 GrpB protein SMU_138 PF03547 Membrane transport protein SMU_1380 PF13333 Integrase core domain SMU_1380 PF00665 Integrase core domain SMU_1381 PF00694 Aconitase C-terminal domain SMU_1382 PF00330 Aconitase family (aconitate hydratase) SMU_1383 PF00180 Isocitrate/isopropylmalate dehydrogenase SMU_1384 PF00682 HMGL-like SMU_1384 PF08502 LeuA allosteric (dimerisation) domain SMU_1386 PF00485 Phosphoribulokinase / Uridine kinase family SMU_1387 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMU_1387 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMU_1388 PF00271 Helicase conserved C-terminal domain SMU_1388 PF00270 DEAD/DEAH box helicase SMU_1389 PF01293 Phosphoenolpyruvate carboxykinase SMU_139 PF00190 Cupin SMU_1394 PF06421 GTP-binding protein LepA C-terminus SMU_1394 PF03144 Elongation factor Tu domain 2 SMU_1394 PF00009 Elongation factor Tu GTP binding domain SMU_1394 PF14492 Elongation Factor G, domain II SMU_1394 PF00679 Elongation factor G C-terminus SMU_1398 PF01726 LexA DNA binding domain SMU_1398 PF00717 Peptidase S24-like SMU_14 PF00156 Phosphoribosyl transferase domain SMU_140 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_1402c PF09711 CRISPR-associated protein (Cas_Csn2) SMU_1403c PF09827 CRISPR associated protein Cas2 SMU_1404c PF01867 CRISPR associated protein Cas1 SMU_1405c PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 SMU_1405c PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 SMU_1405c PF16592 REC lobe of CRISPR-associated endonuclease Cas9 SMU_1405c PF13395 HNH endonuclease SMU_1406c PF04205 FMN-binding domain SMU_1406c PF00890 FAD binding domain SMU_1406c PF03358 NADPH-dependent FMN reductase SMU_1407c PF13333 Integrase core domain SMU_1407c PF00665 Integrase core domain SMU_1410 PF04205 FMN-binding domain SMU_1410 PF00890 FAD binding domain SMU_1412c PF00005 ABC transporter SMU_1412c PF12704 MacB-like periplasmic core domain SMU_1412c PF02687 FtsX-like permease family SMU_1415c PF13344 Haloacid dehalogenase-like hydrolase SMU_1416c PF00293 NUDIX domain SMU_1418 PF04055 Radical SAM superfamily SMU_1418 PF06969 HemN C-terminal domain SMU_1420 PF02525 Flavodoxin-like fold SMU_1421 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMU_1421 PF00364 Biotin-requiring enzyme SMU_1421 PF02817 e3 binding domain SMU_1422 PF02779 Transketolase, pyrimidine binding domain SMU_1422 PF02780 Transketolase, C-terminal domain SMU_1423 PF00676 Dehydrogenase E1 component SMU_1424 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_1424 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_1425 PF00004 ATPase family associated with various cellular activities (AAA) SMU_1425 PF07724 AAA domain (Cdc48 subfamily) SMU_1425 PF17871 AAA lid domain SMU_1425 PF02861 Clp amino terminal domain, pathogenicity island component SMU_1425 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_1426c PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMU_1426c PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMU_1426c PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMU_1426c PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMU_1428c PF02457 DisA bacterial checkpoint controller nucleotide-binding SMU_1429 PF08245 Mur ligase middle domain SMU_1429 PF08353 Domain of unknown function (DUF1727) SMU_1430 PF07685 CobB/CobQ-like glutamine amidotransferase domain SMU_1431c PF12848 ABC transporter SMU_1431c PF16326 ABC transporter C-terminal domain SMU_1431c PF00005 ABC transporter SMU_1432c PF01270 Glycosyl hydrolases family 8 SMU_1437 PF02350 UDP-N-acetylglucosamine 2-epimerase SMU_143c PF01327 Polypeptide deformylase SMU_1442c PF06998 Protein of unknown function (DUF1307) SMU_1443c PF00756 Putative esterase SMU_1444c PF17770 Ribonuclease J C-terminal domain SMU_1444c PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SMU_1444c PF00753 Metallo-beta-lactamase superfamily SMU_1445c PF08402 TOBE domain SMU_1445c PF00005 ABC transporter SMU_1449 PF05670 NFACT protein RNA binding domain SMU_144c PF00027 Cyclic nucleotide-binding domain SMU_1450 PF00324 Amino acid permease SMU_1451 PF03306 Alpha-acetolactate decarboxylase SMU_1452 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMU_1452 PF00205 Thiamine pyrophosphate enzyme, central domain SMU_1452 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMU_1454c PF01594 AI-2E family transporter SMU_1455 PF00293 NUDIX domain SMU_1457 PF16363 GDP-mannose 4,6 dehydratase SMU_1460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SMU_1461 PF00483 Nucleotidyl transferase SMU_1462c PF01266 FAD dependent oxidoreductase SMU_1463c PF01784 NIF3 (NGG1p interacting factor 3) SMU_1464c PF04816 tRNA (adenine(22)-N(1))-methyltransferase SMU_1466 PF04204 Homoserine O-succinyltransferase SMU_1467 PF00156 Phosphoribosyl transferase domain SMU_1471c PF08279 HTH domain SMU_1471c PF13280 WYL domain SMU_1472 PF17768 RecJ OB domain SMU_1472 PF02272 DHHA1 domain SMU_1472 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SMU_1472 PF01368 DHH family SMU_1473c PF00106 short chain dehydrogenase SMU_1474c PF00753 Metallo-beta-lactamase superfamily SMU_1474c PF12706 Beta-lactamase superfamily domain SMU_1476c PF01926 50S ribosome-binding GTPase SMU_1476c PF13167 GTP-binding GTPase N-terminal SMU_1476c PF16360 GTP-binding GTPase Middle Region SMU_148 PF00465 Iron-containing alcohol dehydrogenase SMU_148 PF00171 Aldehyde dehydrogenase family SMU_1482c PF00561 alpha/beta hydrolase fold SMU_1485c PF07728 AAA domain (dynein-related subfamily) SMU_1485c PF12102 Domain of unknown function (DUF3578) SMU_1489 PF01263 Aldose 1-epimerase SMU_149 PF01797 Transposase IS200 like SMU_1490 PF00232 Glycosyl hydrolase family 1 SMU_1491 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1491 PF02378 Phosphotransferase system, EIIC SMU_1492 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SMU_1493 PF01791 DeoC/LacD family aldolase SMU_1494 PF00294 pfkB family carbohydrate kinase SMU_1495 PF02502 Ribose/Galactose Isomerase SMU_1496 PF02502 Ribose/Galactose Isomerase SMU_1498 PF08220 DeoR-like helix-turn-helix domain SMU_1498 PF00455 DeoR C terminal sensor domain SMU_1499 PF00580 UvrD/REP helicase N-terminal domain SMU_1499 PF12705 PD-(D/E)XK nuclease superfamily SMU_1499 PF13361 UvrD-like helicase C-terminal domain SMU_15 PF00004 ATPase family associated with various cellular activities (AAA) SMU_15 PF01434 Peptidase family M41 SMU_15 PF06480 FtsH Extracellular SMU_15 PF17862 AAA+ lid domain SMU_1500 PF12705 PD-(D/E)XK nuclease superfamily SMU_1505c PF03483 B3/4 domain SMU_1505c PF03484 tRNA synthetase B5 domain SMU_1505c PF03147 Ferredoxin-fold anticodon binding domain SMU_1505c PF01588 Putative tRNA binding domain SMU_1505c PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SMU_1508c PF04055 Radical SAM superfamily SMU_1508c PF06463 Molybdenum Cofactor Synthesis C SMU_1509 PF01381 Helix-turn-helix SMU_1510 PF01588 Putative tRNA binding domain SMU_1510 PF03484 tRNA synthetase B5 domain SMU_1510 PF03147 Ferredoxin-fold anticodon binding domain SMU_1510 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SMU_1510 PF03483 B3/4 domain SMU_1511c PF00583 Acetyltransferase (GNAT) family SMU_1512 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SMU_1512 PF01409 tRNA synthetases class II core domain (F) SMU_1513 PF02463 RecF/RecN/SMC N terminal domain SMU_1513 PF06470 SMC proteins Flexible Hinge Domain SMU_1514 PF14622 Ribonuclease-III-like SMU_1514 PF00035 Double-stranded RNA binding motif SMU_1515 PF00753 Metallo-beta-lactamase superfamily SMU_1516 PF00512 His Kinase A (phospho-acceptor) domain SMU_1516 PF13426 PAS domain SMU_1516 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1516 PF00672 HAMP domain SMU_1517 PF00072 Response regulator receiver domain SMU_1517 PF00486 Transcriptional regulatory protein, C terminal SMU_1519 PF00005 ABC transporter SMU_1520 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1521 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1522 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1523 PF01223 DNA/RNA non-specific endonuclease SMU_1525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMU_1527 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SMU_1527 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SMU_1528 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMU_1528 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMU_1529 PF00231 ATP synthase SMU_1530 PF00306 ATP synthase alpha/beta chain, C terminal domain SMU_1530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMU_1530 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMU_1531 PF00213 ATP synthase delta (OSCP) subunit SMU_1532 PF00430 ATP synthase B/B' CF(0) SMU_1533 PF00119 ATP synthase A chain SMU_1534 PF00137 ATP synthase subunit C SMU_1535 PF00343 Carbohydrate phosphorylase SMU_1536 PF08323 Starch synthase catalytic domain SMU_1536 PF00534 Glycosyl transferases group 1 SMU_1537 PF00483 Nucleotidyl transferase SMU_1538 PF00483 Nucleotidyl transferase SMU_1539 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMU_1539 PF02806 Alpha amylase, C-terminal all-beta domain SMU_1539 PF00128 Alpha amylase, catalytic domain SMU_154 PF00312 Ribosomal protein S15 SMU_1541 PF00128 Alpha amylase, catalytic domain SMU_1541 PF17999 Pullulanase N1-terminal domain SMU_1541 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMU_1542c PF00781 Diacylglycerol kinase catalytic domain SMU_1543 PF03120 NAD-dependent DNA ligase OB-fold domain SMU_1543 PF12826 Helix-hairpin-helix motif SMU_1543 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SMU_1543 PF01653 NAD-dependent DNA ligase adenylation domain SMU_1543 PF00533 BRCA1 C Terminus (BRCT) domain SMU_1545c PF06177 QueT transporter SMU_1547c PF00072 Response regulator receiver domain SMU_1547c PF00196 Bacterial regulatory proteins, luxR family SMU_1548c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1548c PF07730 Histidine kinase SMU_155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SMU_155 PF00013 KH domain SMU_155 PF00575 S1 RNA binding domain SMU_155 PF03725 3' exoribonuclease family, domain 2 SMU_155 PF01138 3' exoribonuclease family, domain 1 SMU_1551c PF00005 ABC transporter SMU_1555c PF03631 Virulence factor BrkB SMU_1556 PF00557 Metallopeptidase family M24 SMU_1557c PF03061 Thioesterase superfamily SMU_1557c PF00392 Bacterial regulatory proteins, gntR family SMU_1557c PF07085 DRTGG domain SMU_1557c PF00571 CBS domain SMU_1560 PF00892 EamA-like transporter family SMU_1561 PF02080 TrkA-C domain SMU_1561 PF02254 TrkA-N domain SMU_1562 PF02254 TrkA-N domain SMU_1562 PF02080 TrkA-C domain SMU_1563 PF00690 Cation transporter/ATPase, N-terminus SMU_1563 PF00689 Cation transporting ATPase, C-terminus SMU_1564 PF00343 Carbohydrate phosphorylase SMU_1565 PF02446 4-alpha-glucanotransferase SMU_1566 PF00356 Bacterial regulatory proteins, lacI family SMU_1569 PF00528 Binding-protein-dependent transport system inner membrane component SMU_157 PF00132 Bacterial transferase hexapeptide (six repeats) SMU_1570 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1571 PF17912 MalK OB fold domain SMU_1571 PF03459 TOBE domain SMU_1571 PF00005 ABC transporter SMU_1572 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMU_1573 PF00438 S-adenosylmethionine synthetase, N-terminal domain SMU_1573 PF02772 S-adenosylmethionine synthetase, central domain SMU_1573 PF02773 S-adenosylmethionine synthetase, C-terminal domain SMU_1577c PF07693 KAP family P-loop domain SMU_1578 PF03099 Biotin/lipoate A/B protein ligase family SMU_1578 PF02237 Biotin protein ligase C terminal domain SMU_1578 PF08279 HTH domain SMU_158 PF01406 tRNA synthetases class I (C) catalytic domain SMU_158 PF09190 DALR domain SMU_1581 PF12169 DNA polymerase III subunits gamma and tau domain III SMU_1582c PF13185 GAF domain SMU_1584c PF06100 MCRA family SMU_1586 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMU_1586 PF03129 Anticodon binding domain SMU_1586 PF02824 TGS domain SMU_1586 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMU_1588c PF13439 Glycosyltransferase Family 4 SMU_1588c PF00534 Glycosyl transferases group 1 SMU_1589c PF00534 Glycosyl transferases group 1 SMU_1589c PF13439 Glycosyltransferase Family 4 SMU_159 PF00636 Ribonuclease III domain SMU_1590 PF00128 Alpha amylase, catalytic domain SMU_1590 PF09154 Domain of unknown function (DUF1939) SMU_1591 PF00356 Bacterial regulatory proteins, lacI family SMU_1592 PF01321 Creatinase/Prolidase N-terminal domain SMU_1592 PF00557 Metallopeptidase family M24 SMU_1595 PF00194 Eukaryotic-type carbonic anhydrase SMU_1596 PF02378 Phosphotransferase system, EIIC SMU_1598 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SMU_1599 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1599 PF08279 HTH domain SMU_1599 PF05043 Mga helix-turn-helix domain SMU_1599 PF00874 PRD domain SMU_16 PF13520 Amino acid permease SMU_160 PF10026 Predicted Zn-dependent protease (DUF2268) SMU_1600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1601 PF00232 Glycosyl hydrolase family 1 SMU_1602 PF00881 Nitroreductase family SMU_1603 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMU_1605 PF07690 Major Facilitator Superfamily SMU_1606 PF01668 SmpB protein SMU_1607 PF00773 RNB domain SMU_1607 PF17876 Cold shock domain SMU_1607 PF08206 Ribonuclease B OB domain SMU_1607 PF00575 S1 RNA binding domain SMU_161 PF13411 MerR HTH family regulatory protein SMU_161 PF07739 TipAS antibiotic-recognition domain SMU_1610 PF00471 Ribosomal protein L33 SMU_1611c PF07690 Major Facilitator Superfamily SMU_1611c PF00083 Sugar (and other) transporter SMU_1613c PF01121 Dephospho-CoA kinase SMU_1614 PF06827 Zinc finger found in FPG and IleRS SMU_1614 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMU_1614 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMU_1616c PF00293 NUDIX domain SMU_1616c PF13344 Haloacid dehalogenase-like hydrolase SMU_1617 PF01926 50S ribosome-binding GTPase SMU_1617 PF07650 KH domain SMU_1618 PF01219 Prokaryotic diacylglycerol kinase SMU_1619c PF02130 Uncharacterized protein family UPF0054 SMU_1620 PF02562 PhoH-like protein SMU_1621c PF06855 YozE SAM-like fold SMU_1622 PF01625 Peptide methionine sulfoxide reductase SMU_1624 PF01765 Ribosome recycling factor SMU_1625 PF00696 Amino acid kinase family SMU_1626 PF00687 Ribosomal protein L1p/L10e family SMU_1627 PF00298 Ribosomal protein L11, RNA binding domain SMU_1627 PF03946 Ribosomal protein L11, N-terminal domain SMU_1629c PF09397 Ftsk gamma domain SMU_1629c PF17854 FtsK alpha domain SMU_1629c PF01580 FtsK/SpoIIIE family SMU_1631 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMU_1632 PF01048 Phosphorylase superfamily SMU_1634c PF00293 NUDIX domain SMU_1635 PF12804 MobA-like NTP transferase domain SMU_1635 PF14602 Hexapeptide repeat of succinyl-transferase SMU_1635 PF00132 Bacterial transferase hexapeptide (six repeats) SMU_1639 PF01588 Putative tRNA binding domain SMU_1639 PF09334 tRNA synthetases class I (M) SMU_164 PF00588 SpoU rRNA Methylase family SMU_164 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMU_1641c PF05532 CsbD-like SMU_1645 PF03848 Tellurite resistance protein TehB SMU_1645 PF09313 Domain of unknown function (DUF1971) SMU_1647c PF01022 Bacterial regulatory protein, arsR family SMU_1649 PF03372 Endonuclease/Exonuclease/phosphatase family SMU_165 PF02645 Uncharacterised protein, DegV family COG1307 SMU_1650 PF00730 HhH-GPD superfamily base excision DNA repair protein SMU_1650 PF00633 Helix-hairpin-helix motif SMU_1650 PF10576 Iron-sulfur binding domain of endonuclease III SMU_1651 PF03960 ArsC family SMU_1652 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMU_1652 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMU_1653 PF01842 ACT domain SMU_1653 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMU_1653 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMU_1656 PF00266 Aminotransferase class-V SMU_1657c PF00543 Nitrogen regulatory protein P-II SMU_1658 PF00909 Ammonium Transporter Family SMU_1659c PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMU_1660c PF06156 Initiation control protein YabA SMU_1661c PF04468 PSP1 C-terminal conserved region SMU_1662 PF09115 DNA polymerase III, delta subunit, C terminal SMU_1663 PF02223 Thymidylate kinase SMU_1664c PF00571 CBS domain SMU_1665 PF00005 ABC transporter SMU_1666 PF12399 Branched-chain amino acid ATP-binding cassette transporter SMU_1666 PF00005 ABC transporter SMU_1667 PF02653 Branched-chain amino acid transport system / permease component SMU_1667 PF11862 Domain of unknown function (DUF3382) SMU_1668 PF02653 Branched-chain amino acid transport system / permease component SMU_1669 PF13458 Periplasmic binding protein SMU_1670c PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SMU_1672 PF00574 Clp protease SMU_1674 PF00155 Aminotransferase class I and II SMU_1675 PF01053 Cys/Met metabolism PLP-dependent enzyme SMU_1676c PF14667 Polysaccharide biosynthesis C-terminal domain SMU_1676c PF01943 Polysaccharide biosynthesis protein SMU_1677 PF08245 Mur ligase middle domain SMU_1677 PF02875 Mur ligase family, glutamate ligase domain SMU_168 PF01381 Helix-turn-helix SMU_1682c PF01965 DJ-1/PfpI family SMU_1683c PF13280 WYL domain SMU_1683c PF08279 HTH domain SMU_1687 PF02833 DHHA2 domain SMU_1687 PF01368 DHH family SMU_1688 PF04914 DltD protein SMU_1689 PF00550 Phosphopantetheine attachment site SMU_169 PF00572 Ribosomal protein L13 SMU_1690 PF03062 MBOAT, membrane-bound O-acyltransferase family SMU_1691 PF13193 AMP-binding enzyme C-terminal domain SMU_1691 PF00501 AMP-binding enzyme SMU_1692 PF04055 Radical SAM superfamily SMU_1693 PF01595 Cyclin M transmembrane N-terminal domain SMU_1693 PF03471 Transporter associated domain SMU_1693 PF00571 CBS domain SMU_1694c PF01594 AI-2E family transporter SMU_1695 PF00005 ABC transporter SMU_1697c PF06962 Putative rRNA methylase SMU_1699c PF04055 Radical SAM superfamily SMU_1699c PF16199 Radical_SAM C-terminal domain SMU_170 PF00380 Ribosomal protein S9/S16 SMU_1700c PF04172 LrgB-like family SMU_1701c PF03788 LrgA family SMU_1702c PF01569 PAP2 superfamily SMU_1703c PF12822 ECF transporter, substrate-specific component SMU_1707c PF00588 SpoU rRNA Methylase family SMU_1708 PF02254 TrkA-N domain SMU_1708 PF02080 TrkA-C domain SMU_1709 PF02386 Cation transport protein SMU_1710c PF01809 Putative membrane protein insertion efficiency factor SMU_1711 PF00849 RNA pseudouridylate synthase SMU_1711 PF01479 S4 domain SMU_1712c PF04079 Segregation and condensation complex subunit ScpB SMU_1713c PF02616 Segregation and condensation protein ScpA SMU_1717c PF01725 Ham1 family SMU_1718 PF01177 Asp/Glu/Hydantoin racemase SMU_1719c PF03672 Uncharacterised protein family (UPF0154) SMU_1721c PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SMU_1721c PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMU_1722c PF01027 Inhibitor of apoptosis-promoting Bax1 SMU_1724c PF08032 RNA 2'-O ribose methyltransferase substrate binding SMU_1724c PF00588 SpoU rRNA Methylase family SMU_1725 PF00708 Acylphosphatase SMU_1727 PF02096 60Kd inner membrane protein SMU_1728 PF03449 Transcription elongation factor, N-terminal SMU_1728 PF01272 Transcription elongation factor, GreA/GreB, C-term SMU_1729c PF02618 YceG-like family SMU_1731 PF02875 Mur ligase family, glutamate ligase domain SMU_1731 PF01225 Mur ligase family, catalytic domain SMU_1731 PF08245 Mur ligase middle domain SMU_1733c PF04434 SWIM zinc finger SMU_1733c PF00176 SNF2 family N-terminal domain SMU_1733c PF00271 Helicase conserved C-terminal domain SMU_1734 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SMU_1735 PF01039 Carboxyl transferase domain SMU_1736 PF02785 Biotin carboxylase C-terminal domain SMU_1736 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMU_1736 PF00289 Biotin carboxylase, N-terminal domain SMU_1737 PF07977 FabA-like domain SMU_1738 PF00364 Biotin-requiring enzyme SMU_1739 PF00109 Beta-ketoacyl synthase, N-terminal domain SMU_1739 PF02801 Beta-ketoacyl synthase, C-terminal domain SMU_1741 PF00698 Acyl transferase domain SMU_1742c PF03060 Nitronate monooxygenase SMU_1743 PF00550 Phosphopantetheine attachment site SMU_1744 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMU_1744 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMU_1745c PF01047 MarR family SMU_1746c PF00378 Enoyl-CoA hydratase/isomerase SMU_1747c PF13419 Haloacid dehalogenase-like hydrolase SMU_1748 PF00696 Amino acid kinase family SMU_1748 PF13840 ACT domain SMU_1753c PF09827 CRISPR associated protein Cas2 SMU_1754c PF01867 CRISPR associated protein Cas1 SMU_1755c PF01867 CRISPR associated protein Cas1 SMU_1757c PF01867 CRISPR associated protein Cas1 SMU_176 PF01609 Transposase DDE domain SMU_176 PF13808 DDE_Tnp_1-associated SMU_177 PF02378 Phosphotransferase system, EIIC SMU_1770 PF00133 tRNA synthetases class I (I, L, M and V) SMU_1770 PF08264 Anticodon-binding domain of tRNA SMU_1770 PF10458 Valyl tRNA synthetase tRNA binding arm SMU_1777 PF07972 NrdI Flavodoxin like SMU_1779c PF01938 TRAM domain SMU_1779c PF05958 tRNA (Uracil-5-)-methyltransferase SMU_1780 PF02631 RecX family SMU_1781 PF04167 Protein of unknown function (DUF402) SMU_1783 PF04073 Aminoacyl-tRNA editing domain SMU_1783 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMU_1783 PF03129 Anticodon binding domain SMU_1784c PF13180 PDZ domain SMU_1784c PF02163 Peptidase family M50 SMU_1786 PF01255 Putative undecaprenyl diphosphate synthase SMU_1787c PF02699 Preprotein translocase subunit SMU_1789c PF01709 Transcriptional regulator SMU_179 PF00890 FAD binding domain SMU_179 PF03358 NADPH-dependent FMN reductase SMU_179 PF04205 FMN-binding domain SMU_1790c PF13411 MerR HTH family regulatory protein SMU_1790c PF07739 TipAS antibiotic-recognition domain SMU_1791c PF05636 HIGH Nucleotidyl Transferase SMU_1795c PF13649 Methyltransferase domain SMU_1798c PF01966 HD domain SMU_1799 PF01467 Cytidylyltransferase-like SMU_180 PF00890 FAD binding domain SMU_180 PF04205 FMN-binding domain SMU_180 PF03358 NADPH-dependent FMN reductase SMU_1800c PF01985 CRS1 / YhbY (CRM) domain SMU_1801c PF01926 50S ribosome-binding GTPase SMU_1805 PF00440 Bacterial regulatory proteins, tetR family SMU_1806 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SMU_1807c PF00892 EamA-like transporter family SMU_181 PF00288 GHMP kinases N terminal domain SMU_181 PF08544 GHMP kinases C terminal SMU_181 PF10509 Galactokinase galactose-binding signature SMU_1811 PF00005 ABC transporter SMU_1814 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1814 PF13426 PAS domain SMU_1814 PF13188 PAS domain SMU_1814 PF00989 PAS fold SMU_1814 PF00512 His Kinase A (phospho-acceptor) domain SMU_1815 PF00486 Transcriptional regulatory protein, C terminal SMU_1815 PF00072 Response regulator receiver domain SMU_1817c PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SMU_1819 PF02637 GatB domain SMU_1819 PF02934 GatB/GatE catalytic domain SMU_182 PF00005 ABC transporter SMU_1820c PF01425 Amidase SMU_1821c PF02686 Glu-tRNAGln amidotransferase C subunit SMU_1822 PF00152 tRNA synthetases class II (D, K and N) SMU_1822 PF01336 OB-fold nucleic acid binding domain SMU_1822 PF02938 GAD domain SMU_1823 PF00857 Isochorismatase family SMU_1824c PF06018 CodY GAF-like domain SMU_1824c PF08222 CodY helix-turn-helix domain SMU_1826 PF00155 Aminotransferase class I and II SMU_1827 PF02632 BioY family SMU_1828 PF00582 Universal stress protein family SMU_183 PF00950 ABC 3 transport family SMU_1831 PF17763 Glutaminase/Asparaginase C-terminal domain SMU_1831 PF00710 Asparaginase, N-terminal SMU_1833 PF17191 RecG wedge domain SMU_1833 PF00270 DEAD/DEAH box helicase SMU_1833 PF00271 Helicase conserved C-terminal domain SMU_1834 PF00842 Alanine racemase, C-terminal domain SMU_1834 PF01168 Alanine racemase, N-terminal domain SMU_1835 PF01648 4'-phosphopantetheinyl transferase superfamily SMU_1836 PF00793 DAHP synthetase I family SMU_1837 PF00793 DAHP synthetase I family SMU_1838 PF07516 SecA Wing and Scaffold domain SMU_1838 PF02810 SEC-C motif SMU_1838 PF07517 SecA DEAD-like domain SMU_1838 PF01043 SecA preprotein cross-linking domain SMU_1839 PF01238 Phosphomannose isomerase type I SMU_184 PF01297 Zinc-uptake complex component A periplasmic SMU_1840 PF00480 ROK family SMU_1841 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_1841 PF02378 Phosphotransferase system, EIIC SMU_1841 PF00367 phosphotransferase system, EIIB SMU_1843 PF00251 Glycosyl hydrolases family 32 N-terminal domain SMU_1843 PF08244 Glycosyl hydrolases family 32 C terminal SMU_1844 PF00356 Bacterial regulatory proteins, lacI family SMU_1845 PF01029 NusB family SMU_1846c PF03780 Asp23 family, cell envelope-related function SMU_1847 PF08207 Elongation factor P (EF-P) KOW-like domain SMU_1847 PF01132 Elongation factor P (EF-P) OB domain SMU_1847 PF09285 Elongation factor P, C-terminal SMU_1848 PF00520 Ion transport protein SMU_1848 PF00027 Cyclic nucleotide-binding domain SMU_1849 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMU_1850 PF01321 Creatinase/Prolidase N-terminal domain SMU_1850 PF00557 Metallopeptidase family M24 SMU_1851 PF17760 UvrA interaction domain SMU_1851 PF00005 ABC transporter SMU_1851 PF17755 UvrA DNA-binding domain SMU_1858 PF01084 Ribosomal protein S18 SMU_1859 PF00436 Single-strand binding protein family SMU_1860 PF01250 Ribosomal protein S6 SMU_1865 PF14815 NUDIX domain SMU_1865 PF00730 HhH-GPD superfamily base excision DNA repair protein SMU_1867c PF08240 Alcohol dehydrogenase GroES-like domain SMU_1867c PF13823 Alcohol dehydrogenase GroES-associated SMU_1867c PF00107 Zinc-binding dehydrogenase SMU_1869 PF00085 Thioredoxin SMU_1870 PF01713 Smr domain SMU_1870 PF00488 MutS domain V SMU_1873 PF11858 Domain of unknown function (DUF3378) SMU_1873 PF01351 Ribonuclease HII SMU_1874 PF10502 Signal peptidase, peptidase S26 SMU_1875 PF13538 UvrD-like helicase C-terminal domain SMU_1875 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SMU_1875 PF14490 Helix-hairpin-helix containing domain SMU_1877 PF03610 PTS system fructose IIA component SMU_1877 PF03830 PTS system sorbose subfamily IIB component SMU_1878 PF03609 PTS system sorbose-specific iic component SMU_1879 PF03613 PTS system mannose/fructose/sorbose family IID component SMU_187c PF01207 Dihydrouridine synthase (Dus) SMU_1881c PF03412 Peptidase C39 family SMU_1881c PF00005 ABC transporter SMU_1881c PF00664 ABC transporter transmembrane region SMU_1886 PF02403 Seryl-tRNA synthetase N-terminal domain SMU_1886 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMU_188c PF01430 Hsp33 protein SMU_1893c PF00665 Integrase core domain SMU_1893c PF13333 Integrase core domain SMU_1897 PF00005 ABC transporter SMU_1897 PF03412 Peptidase C39 family SMU_1897 PF00664 ABC transporter transmembrane region SMU_1898 PF03412 Peptidase C39 family SMU_1898 PF00005 ABC transporter SMU_1898 PF00664 ABC transporter transmembrane region SMU_1899 PF00005 ABC transporter SMU_1899 PF03412 Peptidase C39 family SMU_1899 PF00664 ABC transporter transmembrane region SMU_1916 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SMU_1916 PF17203 Single cache domain 3 SMU_1916 PF00989 PAS fold SMU_1916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1918 PF09335 SNARE associated Golgi protein SMU_1920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SMU_1920 PF01926 50S ribosome-binding GTPase SMU_1921 PF01695 IstB-like ATP binding protein SMU_1921 PF07319 Primosomal protein DnaI N-terminus SMU_1923c PF03477 ATP cone domain SMU_1924 PF00486 Transcriptional regulatory protein, C terminal SMU_1924 PF00072 Response regulator receiver domain SMU_1927 PF00005 ABC transporter SMU_1928 PF02687 FtsX-like permease family SMU_1928 PF12704 MacB-like periplasmic core domain SMU_1929 PF01435 Peptidase family M48 SMU_1930 PF04011 LemA family SMU_1931 PF02527 rRNA small subunit methyltransferase G SMU_1934c PF12558 ATP-binding cassette cobalt transporter SMU_1934c PF00005 ABC transporter SMU_1935c PF07155 ECF-type riboflavin transporter, S component SMU_1937 PF00795 Carbon-nitrogen hydrolase SMU_1938c PF00528 Binding-protein-dependent transport system inner membrane component SMU_1939c PF09383 NIL domain SMU_1939c PF00005 ABC transporter SMU_1940c PF07687 Peptidase dimerisation domain SMU_1940c PF01546 Peptidase family M20/M25/M40 SMU_1941 PF03180 NLPA lipoprotein SMU_1942c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1943 PF00133 tRNA synthetases class I (I, L, M and V) SMU_1943 PF08264 Anticodon-binding domain of tRNA SMU_1943 PF09334 tRNA synthetases class I (M) SMU_1943 PF13603 Leucyl-tRNA synthetase, Domain 2 SMU_1947 PF00467 KOW motif SMU_1947 PF02357 Transcription termination factor nusG SMU_1949 PF00912 Transglycosylase SMU_1949 PF00905 Penicillin binding protein transpeptidase domain SMU_1950 PF00849 RNA pseudouridylate synthase SMU_1950 PF01479 S4 domain SMU_1954 PF00118 TCP-1/cpn60 chaperonin family SMU_1955 PF00166 Chaperonin 10 Kd subunit SMU_1957 PF03613 PTS system mannose/fructose/sorbose family IID component SMU_1958c PF03609 PTS system sorbose-specific iic component SMU_1964c PF00072 Response regulator receiver domain SMU_1964c PF00196 Bacterial regulatory proteins, luxR family SMU_1965c PF07730 Histidine kinase SMU_1967 PF00436 Single-strand binding protein family SMU_1969c PF01047 MarR family SMU_196c PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMU_196c PF05257 CHAP domain SMU_1970c PF14794 Domain of unknown function (DUF4479) SMU_1970c PF01588 Putative tRNA binding domain SMU_1971c PF00085 Thioredoxin SMU_1973 PF05343 M42 glutamyl aminopeptidase SMU_1974 PF03807 NADP oxidoreductase coenzyme F420-dependent SMU_1974 PF14748 Pyrroline-5-carboxylate reductase dimerisation SMU_1978 PF00871 Acetokinase family SMU_1979c PF02384 N-6 DNA Methylase SMU_1985 PF00482 Type II secretion system (T2SS), protein F SMU_1987 PF00437 Type II/IV secretion system protein SMU_1989 PF04998 RNA polymerase Rpb1, domain 5 SMU_1989 PF04997 RNA polymerase Rpb1, domain 1 SMU_1989 PF05000 RNA polymerase Rpb1, domain 4 SMU_1989 PF00623 RNA polymerase Rpb1, domain 2 SMU_1989 PF04983 RNA polymerase Rpb1, domain 3 SMU_1990 PF04560 RNA polymerase Rpb2, domain 7 SMU_1990 PF00562 RNA polymerase Rpb2, domain 6 SMU_1990 PF10385 RNA polymerase beta subunit external 1 domain SMU_1990 PF04561 RNA polymerase Rpb2, domain 2 SMU_1990 PF04565 RNA polymerase Rpb2, domain 3 SMU_1990 PF04563 RNA polymerase beta subunit SMU_1991 PF00912 Transglycosylase SMU_1991 PF00905 Penicillin binding protein transpeptidase domain SMU_1992 PF01479 S4 domain SMU_1992 PF00579 tRNA synthetases class I (W and Y) SMU_1993 PF00950 ABC 3 transport family SMU_1994 PF00005 ABC transporter SMU_1995c PF01047 MarR family SMU_1996 PF08544 GHMP kinases C terminal SMU_1996 PF00288 GHMP kinases N terminal domain SMU_20 PF04085 rod shape-determining protein MreC SMU_2000 PF01196 Ribosomal protein L17 SMU_2001 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SMU_2001 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SMU_2001 PF01000 RNA polymerase Rpb3/RpoA insert domain SMU_2002 PF00411 Ribosomal protein S11 SMU_2003 PF00416 Ribosomal protein S13/S18 SMU_2003a PF00444 Ribosomal protein L36 SMU_2004 PF01176 Translation initiation factor 1A / IF-1 SMU_2006 PF00344 SecY translocase SMU_2007 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SMU_2008 PF00327 Ribosomal protein L30p/L7e SMU_2009 PF03719 Ribosomal protein S5, C-terminal domain SMU_2009 PF00333 Ribosomal protein S5, N-terminal domain SMU_2010 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SMU_2011 PF00347 Ribosomal protein L6 SMU_2012 PF00410 Ribosomal protein S8 SMU_2014 PF00253 Ribosomal protein S14p/S29e SMU_2015 PF00281 Ribosomal protein L5 SMU_2015 PF00673 ribosomal L5P family C-terminus SMU_2016 PF00467 KOW motif SMU_2016 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SMU_2017 PF00238 Ribosomal protein L14p/L23e SMU_2018 PF00366 Ribosomal protein S17 SMU_2019 PF00831 Ribosomal L29 protein SMU_2020 PF00252 Ribosomal protein L16p/L10e SMU_2021 PF00189 Ribosomal protein S3, C-terminal domain SMU_2021 PF07650 KH domain SMU_2022 PF00237 Ribosomal protein L22p/L17e SMU_2023c PF00203 Ribosomal protein S19 SMU_2024c PF00573 Ribosomal protein L4/L1 family SMU_2025 PF00297 Ribosomal protein L3 SMU_2026c PF00338 Ribosomal protein S10p/S20e SMU_2028 PF02435 Levansucrase/Invertase SMU_2029 PF02861 Clp amino terminal domain, pathogenicity island component SMU_2029 PF17871 AAA lid domain SMU_2029 PF07724 AAA domain (Cdc48 subfamily) SMU_2029 PF00004 ATPase family associated with various cellular activities (AAA) SMU_2029 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_2030 PF05848 CtsR N-terminal HTH domain SMU_2030 PF17727 CtsR C-terminal dimerization domain SMU_2031 PF00889 Elongation factor TS SMU_2032 PF00318 Ribosomal protein S2 SMU_2035 PF17676 LD-carboxypeptidase C-terminal domain SMU_2035 PF02016 LD-carboxypeptidase N-terminal domain SMU_2036 PF05649 Peptidase family M13 SMU_2036 PF01431 Peptidase family M13 SMU_2037 PF16657 Maltogenic Amylase, C-terminal domain SMU_2037 PF00128 Alpha amylase, catalytic domain SMU_2038 PF02378 Phosphotransferase system, EIIC SMU_2038 PF00367 phosphotransferase system, EIIB SMU_2040 PF07702 UTRA domain SMU_2040 PF00392 Bacterial regulatory proteins, gntR family SMU_2042 PF00746 LPXTG cell wall anchor motif SMU_2042 PF13199 Glycosyl hydrolase family 66 SMU_2043c PF02580 D-Tyr-tRNA(Tyr) deacylase SMU_2044 PF02824 TGS domain SMU_2044 PF04607 Region found in RelA / SpoT proteins SMU_2044 PF13291 ACT domain SMU_2046c PF03372 Endonuclease/Exonuclease/phosphatase family SMU_2047 PF02378 Phosphotransferase system, EIIC SMU_2047 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_2047 PF00367 phosphotransferase system, EIIB SMU_2049c PF04452 RNA methyltransferase SMU_2056 PF16193 AAA C-terminal domain SMU_2056 PF12002 MgsA AAA+ ATPase C terminal SMU_2056 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMU_2058 PF07739 TipAS antibiotic-recognition domain SMU_2058 PF13411 MerR HTH family regulatory protein SMU_2059c PF03601 Conserved hypothetical protein 698 SMU_2060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_2060 PF03466 LysR substrate binding domain SMU_2063 PF00762 Ferrochelatase SMU_2065 PF16363 GDP-mannose 4,6 dehydratase SMU_2067 PF00535 Glycosyl transferase family 2 SMU_2069 PF02535 ZIP Zinc transporter SMU_2070 PF03883 Peroxide stress protein YaaA SMU_2074 PF13597 Anaerobic ribonucleoside-triphosphate reductase SMU_2074 PF03477 ATP cone domain SMU_2077c PF06949 Protein of unknown function (DUF1292) SMU_2078c PF03652 Holliday junction resolvase SMU_2079c PF06135 IreB regulatory phosphoprotein SMU_2084c PF03960 ArsC family SMU_2085 PF00154 recA bacterial DNA recombination protein SMU_2086 PF02464 Competence-damaged protein SMU_2086 PF18146 Damage-inducible protein CinA KH domain SMU_2086 PF00994 Probable molybdopterin binding domain SMU_2087 PF03352 Methyladenine glycosylase SMU_2087 PF00958 GMP synthase C terminal domain SMU_2087 PF00117 Glutamine amidotransferase class-I SMU_2087 PF13673 Acetyltransferase (GNAT) domain SMU_2087 PF13302 Acetyltransferase (GNAT) domain SMU_2088 PF01330 RuvA N terminal domain SMU_2088 PF07499 RuvA, C-terminal domain SMU_2089 PF01119 DNA mismatch repair protein, C-terminal domain SMU_2089 PF08676 MutL C terminal dimerisation domain SMU_2091c PF05188 MutS domain II SMU_2091c PF00488 MutS domain V SMU_2091c PF01624 MutS domain I SMU_2091c PF05190 MutS family domain IV SMU_2091c PF05192 MutS domain III SMU_2093 PF01316 Arginine repressor, DNA binding domain SMU_2093 PF02863 Arginine repressor, C-terminal domain SMU_2097 PF02863 Arginine repressor, C-terminal domain SMU_2097 PF01316 Arginine repressor, DNA binding domain SMU_2098 PF03485 Arginyl tRNA synthetase N terminal domain SMU_2098 PF05746 DALR anticodon binding domain SMU_2098 PF00750 tRNA synthetases class I (R) SMU_2099c PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMU_2099c PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SMU_2100c PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SMU_2100c PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMU_2101 PF00152 tRNA synthetases class II (D, K and N) SMU_2101 PF01336 OB-fold nucleic acid binding domain SMU_2101 PF02938 GAD domain SMU_2102 PF13393 Histidyl-tRNA synthetase SMU_2102 PF03129 Anticodon binding domain SMU_2104 PF13520 Amino acid permease SMU_2104a PF01783 Ribosomal L32p protein family SMU_2108c PF01022 Bacterial regulatory protein, arsR family SMU_2109 PF07690 Major Facilitator Superfamily SMU_2112 PF02324 Glycosyl hydrolase family 70 SMU_2112 PF01473 Putative cell wall binding repeat SMU_2114c PF13411 MerR HTH family regulatory protein SMU_2115 PF00106 short chain dehydrogenase SMU_2116 PF00005 ABC transporter SMU_2116 PF00571 CBS domain SMU_2117 PF00528 Binding-protein-dependent transport system inner membrane component SMU_2118 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SMU_2119 PF00528 Binding-protein-dependent transport system inner membrane component SMU_2120c PF02245 Methylpurine-DNA glycosylase (MPG) SMU_2125 PF01638 HxlR-like helix-turn-helix SMU_2127 PF00171 Aldehyde dehydrogenase family SMU_2128 PF00920 Dehydratase family SMU_2129c PF01883 Iron-sulfur cluster assembly protein SMU_2133c PF01061 ABC-2 type transporter SMU_2133c PF01061 ABC-2 type transporter SMU_2135c PF00163 Ribosomal protein S4/S9 N-terminal domain SMU_2135c PF01479 S4 domain SMU_2138 PF03796 DnaB-like helicase C terminal domain SMU_2138 PF00772 DnaB-like helicase N terminal domain SMU_2139c PF01281 Ribosomal protein L9, N-terminal domain SMU_2139c PF03948 Ribosomal protein L9, C-terminal domain SMU_2146c PF06737 Transglycosylase-like domain SMU_2147c PF08239 Bacterial SH3 domain SMU_2147c PF00877 NlpC/P60 family SMU_2147c PF01476 LysM domain SMU_2148c PF02361 Cobalt transport protein SMU_2149c PF00005 ABC transporter SMU_2150c PF00005 ABC transporter SMU_2151 PF01066 CDP-alcohol phosphatidyltransferase SMU_2153c PF05193 Peptidase M16 inactive domain SMU_2153c PF00675 Insulinase (Peptidase family M16) SMU_2156 PF02463 RecF/RecN/SMC N terminal domain SMU_2157 PF00571 CBS domain SMU_2157 PF00478 IMP dehydrogenase / GMP reductase domain SMU_2158c PF00579 tRNA synthetases class I (W and Y) SMU_2159 PF00005 ABC transporter SMU_2159 PF12848 ABC transporter SMU_2162c PF02590 Predicted SPOUT methyltransferase SMU_2164 PF13180 PDZ domain SMU_2165 PF17762 HTH domain found in ParB protein SMU_2165 PF02195 ParB-like nuclease domain SMU_2166 PF00276 Ribosomal protein L23 SMU_2167 PF00181 Ribosomal Proteins L2, RNA binding domain SMU_2167 PF03947 Ribosomal Proteins L2, C-terminal domain SMU_218 PF01381 Helix-turn-helix SMU_22 PF01476 LysM domain SMU_22 PF05257 CHAP domain SMU_221c PF14659 Phage integrase, N-terminal SAM-like domain SMU_221c PF00589 Phage integrase family SMU_228 PF03780 Asp23 family, cell envelope-related function SMU_229 PF13684 Dihydroxyacetone kinase family SMU_229 PF02734 DAK2 domain SMU_23 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMU_23 PF14572 Phosphoribosyl synthetase-associated domain SMU_231 PF00205 Thiamine pyrophosphate enzyme, central domain SMU_231 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMU_231 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMU_232 PF01842 ACT domain SMU_232 PF10369 Small subunit of acetolactate synthase SMU_233 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SMU_233 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SMU_234 PF00585 C-terminal regulatory domain of Threonine dehydratase SMU_234 PF00291 Pyridoxal-phosphate dependent enzyme SMU_236c PF00440 Bacterial regulatory proteins, tetR family SMU_238c PF00005 ABC transporter SMU_24 PF00155 Aminotransferase class I and II SMU_241c PF00005 ABC transporter SMU_242c PF00528 Binding-protein-dependent transport system inner membrane component SMU_244 PF02673 Bacitracin resistance protein BacA SMU_245 PF05389 Negative regulator of genetic competence (MecA) SMU_246 PF00953 Glycosyl transferase family 4 SMU_247 PF00005 ABC transporter SMU_248 PF01458 Uncharacterized protein family (UPF0051) SMU_249 PF00266 Aminotransferase class-V SMU_25 PF11967 Recombination protein O N terminal SMU_25 PF02565 Recombination protein O C terminal SMU_250 PF01592 NifU-like N terminal domain SMU_251 PF01458 Uncharacterized protein family (UPF0051) SMU_253 PF00768 D-alanyl-D-alanine carboxypeptidase SMU_253 PF07943 Penicillin-binding protein 5, C-terminal domain SMU_255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMU_256 PF00528 Binding-protein-dependent transport system inner membrane component SMU_257 PF00528 Binding-protein-dependent transport system inner membrane component SMU_257 PF12911 N-terminal TM domain of oligopeptide transport permease C SMU_258 PF00005 ABC transporter SMU_258 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMU_259 PF00005 ABC transporter SMU_259 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMU_26 PF02504 Fatty acid synthesis protein SMU_261c PF00196 Bacterial regulatory proteins, luxR family SMU_262 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMU_262 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMU_263 PF13520 Amino acid permease SMU_264 PF04371 Porphyromonas-type peptidyl-arginine deiminase SMU_265 PF00696 Amino acid kinase family SMU_267c PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMU_267c PF04262 Glutamate-cysteine ligase SMU_267c PF18419 ATP-grasp-like domain SMU_268 PF00709 Adenylosuccinate synthetase SMU_27 PF00550 Phosphopantetheine attachment site SMU_270 PF03611 PTS system sugar-specific permease component SMU_271 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_272 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_273 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMU_274 PF01261 Xylose isomerase-like TIM barrel SMU_275 PF00596 Class II Aldolase and Adducin N-terminal domain SMU_28 PF00005 ABC transporter SMU_28 PF03412 Peptidase C39 family SMU_28 PF00664 ABC transporter transmembrane region SMU_286 PF00664 ABC transporter transmembrane region SMU_286 PF03412 Peptidase C39 family SMU_286 PF00005 ABC transporter SMU_29 PF01259 SAICAR synthetase SMU_291 PF00456 Transketolase, thiamine diphosphate binding domain SMU_291 PF02780 Transketolase, C-terminal domain SMU_291 PF02779 Transketolase, pyrimidine binding domain SMU_297 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMU_297 PF01367 5'-3' exonuclease, C-terminal SAM fold SMU_297 PF00476 DNA polymerase family A SMU_298 PF13380 CoA binding domain SMU_30 PF02769 AIR synthase related protein, C-terminal domain SMU_30 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SMU_30 PF00586 AIR synthase related protein, N-terminal domain SMU_300 PF01702 Queuine tRNA-ribosyltransferase SMU_303 PF12706 Beta-lactamase superfamily domain SMU_304 PF14437 MafB19-like deaminase SMU_307 PF00342 Phosphoglucose isomerase SMU_308 PF00106 short chain dehydrogenase SMU_309 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_309 PF00874 PRD domain SMU_309 PF05043 Mga helix-turn-helix domain SMU_309 PF08279 HTH domain SMU_311 PF03608 PTS system enzyme II sorbitol-specific factor SMU_312 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SMU_312 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SMU_317 PF14602 Hexapeptide repeat of succinyl-transferase SMU_317 PF00132 Bacterial transferase hexapeptide (six repeats) SMU_317 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SMU_318 PF01546 Peptidase family M20/M25/M40 SMU_318 PF07687 Peptidase dimerisation domain SMU_32 PF00156 Phosphoribosyl transferase domain SMU_320 PF01812 5-formyltetrahydrofolate cyclo-ligase family SMU_321 PF01694 Rhomboid family SMU_322c PF00483 Nucleotidyl transferase SMU_323 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMU_323 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMU_325 PF00692 dUTPase SMU_327 PF18073 Rubredoxin metal binding domain SMU_328 PF00484 Carbonic anhydrase SMU_329 PF01987 Mitochondrial biogenesis AIM24 SMU_330 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMU_331 PF08279 HTH domain SMU_331 PF02829 3H domain SMU_334 PF00764 Arginosuccinate synthase SMU_335 PF14698 Argininosuccinate lyase C-terminal SMU_335 PF00206 Lyase SMU_336 PF00825 Ribonuclease P SMU_337 PF02096 60Kd inner membrane protein SMU_34 PF00586 AIR synthase related protein, N-terminal domain SMU_34 PF02769 AIR synthase related protein, C-terminal domain SMU_340 PF00468 Ribosomal protein L34 SMU_341 PF01026 TatD related DNase SMU_342 PF13331 Domain of unknown function (DUF4093) SMU_345c PF01638 HxlR-like helix-turn-helix SMU_346 PF00881 Nitroreductase family SMU_349 PF00398 Ribosomal RNA adenine dimethylase SMU_35 PF00551 Formyl transferase SMU_351 PF16745 RsgA N-terminal domain SMU_351 PF03193 RsgA GTPase SMU_352 PF00834 Ribulose-phosphate 3 epimerase family SMU_354 PF02646 RmuC family SMU_355 PF01966 HD domain SMU_356 PF00156 Phosphoribosyl transferase domain SMU_356 PF09182 Bacterial purine repressor, N-terminal SMU_357 PF00164 Ribosomal protein S12/S23 SMU_358 PF00177 Ribosomal protein S7p/S5e SMU_359 PF00679 Elongation factor G C-terminus SMU_359 PF14492 Elongation Factor G, domain II SMU_359 PF03764 Elongation factor G, domain IV SMU_359 PF00009 Elongation factor Tu GTP binding domain SMU_359 PF03144 Elongation factor Tu domain 2 SMU_360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SMU_360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SMU_361 PF00162 Phosphoglycerate kinase SMU_363 PF13411 MerR HTH family regulatory protein SMU_364 PF00120 Glutamine synthetase, catalytic domain SMU_364 PF03951 Glutamine synthetase, beta-Grasp domain SMU_365 PF04898 Glutamate synthase central domain SMU_365 PF01645 Conserved region in glutamate synthase SMU_365 PF00310 Glutamine amidotransferases class-II SMU_365 PF01493 GXGXG motif SMU_366 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMU_366 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_367 PF05257 CHAP domain SMU_367 PF01476 LysM domain SMU_368c PF17770 Ribonuclease J C-terminal domain SMU_368c PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SMU_368c PF00753 Metallo-beta-lactamase superfamily SMU_369c PF07288 Protein of unknown function (DUF1447) SMU_37 PF02142 MGS-like domain SMU_37 PF01808 AICARFT/IMPCHase bienzyme SMU_370 PF00005 ABC transporter SMU_373 PF13649 Methyltransferase domain SMU_376 PF00202 Aminotransferase class-III SMU_382c PF00248 Aldo/keto reductase family SMU_383c PF01370 NAD dependent epimerase/dehydratase family SMU_385 PF00814 Glycoprotease family SMU_386 PF00583 Acetyltransferase (GNAT) family SMU_387 PF00814 Glycoprotease family SMU_391c PF11208 Protein of unknown function (DUF2992) SMU_393 PF04394 Protein of unknown function, DUF536 SMU_393 PF08279 HTH domain SMU_394c PF02575 YbaB/EbfC DNA-binding family SMU_395 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SMU_395 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SMU_395 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SMU_396 PF00230 Major intrinsic protein SMU_400 PF00144 Beta-lactamase SMU_402 PF01228 Glycine radical SMU_402 PF02901 Pyruvate formate lyase-like SMU_403 PF00817 impB/mucB/samB family SMU_403 PF11799 impB/mucB/samB family C-terminal domain SMU_403 PF11798 IMS family HHH motif SMU_408 PF00860 Permease family SMU_409 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMU_410 PF03816 Cell envelope-related transcriptional attenuator domain SMU_412c PF01230 HIT domain SMU_413 PF00005 ABC transporter SMU_414 PF05975 Bacterial ABC transporter protein EcsB SMU_416 PF02390 Putative methyltransferase SMU_417 PF02576 RimP N-terminal domain SMU_417 PF17384 RimP C-terminal SH3 domain SMU_418 PF08529 NusA N-terminal domain SMU_418 PF00575 S1 RNA binding domain SMU_418 PF13184 NusA-like KH domain SMU_419 PF04296 Protein of unknown function (DUF448) SMU_420 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SMU_421 PF00009 Elongation factor Tu GTP binding domain SMU_421 PF11987 Translation-initiation factor 2 SMU_421 PF04760 Translation initiation factor IF-2, N-terminal region SMU_422 PF02033 Ribosome-binding factor A SMU_424 PF03965 Penicillinase repressor SMU_426 PF00403 Heavy-metal-associated domain SMU_43 PF07669 Eco57I restriction-modification methylase SMU_43 PF02384 N-6 DNA Methylase SMU_431 PF00005 ABC transporter SMU_431 PF13732 Domain of unknown function (DUF4162) SMU_435 PF01979 Amidohydrolase family SMU_436c PF13333 Integrase core domain SMU_436c PF00665 Integrase core domain SMU_438c PF01869 BadF/BadG/BcrA/BcrD ATPase family SMU_442 PF01878 EVE domain SMU_445 PF02091 Glycyl-tRNA synthetase alpha subunit SMU_446 PF02092 Glycyl-tRNA synthetase beta subunit SMU_447 PF05979 Bacterial protein of unknown function (DUF896) SMU_448 PF03413 Peptidase propeptide and YPEB domain SMU_449 PF00696 Amino acid kinase family SMU_450 PF00171 Aldehyde dehydrogenase family SMU_453 PF01795 MraW methylase family SMU_454 PF04977 Septum formation initiator SMU_455 PF03717 Penicillin-binding Protein dimerisation domain SMU_455 PF03793 PASTA domain SMU_455 PF00905 Penicillin binding protein transpeptidase domain SMU_456 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SMU_456 PF00953 Glycosyl transferase family 4 SMU_458 PF00271 Helicase conserved C-terminal domain SMU_458 PF00270 DEAD/DEAH box helicase SMU_460 PF00528 Binding-protein-dependent transport system inner membrane component SMU_461 PF00005 ABC transporter SMU_463 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_464 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SMU_464 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SMU_464 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SMU_465 PF02540 NAD synthase SMU_466 PF03051 Peptidase C1-like family SMU_467 PF00905 Penicillin binding protein transpeptidase domain SMU_467 PF00912 Transglycosylase SMU_469 PF03838 Recombination protein U SMU_470 PF06908 YspA SLOG family SMU_471 PF05103 DivIVA protein SMU_472 PF02926 THUMP domain SMU_472 PF01170 Putative RNA methylase family UPF0020 SMU_473 PF18041 MapZ extracellular domain 1 SMU_473 PF18708 MapZ extracellular C-terminal domain 2 SMU_474 PF02664 S-Ribosylhomocysteinase (LuxS) SMU_475 PF01966 HD domain SMU_475 PF12072 Domain of unknown function (DUF3552) SMU_475 PF00013 KH domain SMU_478 PF00625 Guanylate kinase SMU_479 PF01192 RNA polymerase Rpb6 SMU_48 PF02843 Phosphoribosylglycinamide synthetase, C domain SMU_48 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMU_48 PF02844 Phosphoribosylglycinamide synthetase, N domain SMU_480 PF17764 3′ DNA-binding domain (3′BD) SMU_480 PF04851 Type III restriction enzyme, res subunit SMU_480 PF18074 Primosomal protein N C-terminal domain SMU_480 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SMU_480 PF00271 Helicase conserved C-terminal domain SMU_481 PF00551 Formyl transferase SMU_481 PF02911 Formyl transferase, C-terminal domain SMU_482 PF01189 16S rRNA methyltransferase RsmB/F SMU_482 PF01029 NusB family SMU_484 PF00069 Protein kinase domain SMU_484 PF03793 PASTA domain SMU_486 PF00672 HAMP domain SMU_486 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_486 PF07730 Histidine kinase SMU_487 PF00072 Response regulator receiver domain SMU_487 PF00196 Bacterial regulatory proteins, luxR family SMU_488 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMU_489 PF00575 S1 RNA binding domain SMU_490 PF04055 Radical SAM superfamily SMU_490 PF13187 4Fe-4S dicluster domain SMU_491 PF00455 DeoR C terminal sensor domain SMU_491 PF08220 DeoR-like helix-turn-helix domain SMU_493 PF01228 Glycine radical SMU_493 PF02901 Pyruvate formate lyase-like SMU_494 PF00923 Transaldolase/Fructose-6-phosphate aldolase SMU_495 PF00465 Iron-containing alcohol dehydrogenase SMU_496 PF00291 Pyridoxal-phosphate dependent enzyme SMU_497c PF09186 Domain of unknown function (DUF1949) SMU_497c PF01205 Uncharacterized protein family UPF0029 SMU_498 PF04851 Type III restriction enzyme, res subunit SMU_498 PF00271 Helicase conserved C-terminal domain SMU_499 PF00156 Phosphoribosyl transferase domain SMU_50 PF00731 AIR carboxylase SMU_500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SMU_500 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SMU_504 PF02086 D12 class N6 adenine-specific DNA methyltransferase SMU_505 PF01555 DNA methylase SMU_506 PF04556 DpnII restriction endonuclease SMU_507 PF08220 DeoR-like helix-turn-helix domain SMU_507 PF00455 DeoR C terminal sensor domain SMU_51 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMU_51 PF02222 ATP-grasp domain SMU_51 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SMU_515 PF06100 MCRA family SMU_517 PF01467 Cytidylyltransferase-like SMU_518 PF05362 Lon protease (S16) C-terminal proteolytic domain SMU_518 PF13180 PDZ domain SMU_520 PF02872 5'-nucleotidase, C-terminal domain SMU_521 PF06265 Protein of unknown function (DUF1027) SMU_522 PF04055 Radical SAM superfamily SMU_524 PF00005 ABC transporter SMU_524 PF00664 ABC transporter transmembrane region SMU_525 PF00005 ABC transporter SMU_525 PF00664 ABC transporter transmembrane region SMU_526c PF13411 MerR HTH family regulatory protein SMU_532 PF00425 chorismate binding enzyme SMU_532 PF04715 Anthranilate synthase component I, N terminal region SMU_533 PF00117 Glutamine amidotransferase class-I SMU_534 PF02885 Glycosyl transferase family, helical bundle domain SMU_534 PF00591 Glycosyl transferase family, a/b domain SMU_535 PF00218 Indole-3-glycerol phosphate synthase SMU_536 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SMU_537 PF00291 Pyridoxal-phosphate dependent enzyme SMU_538 PF00290 Tryptophan synthase alpha chain SMU_54 PF01177 Asp/Glu/Hydantoin racemase SMU_540 PF00210 Ferritin-like domain SMU_542 PF00480 ROK family SMU_543 PF00581 Rhodanese-like domain SMU_546 PF03144 Elongation factor Tu domain 2 SMU_546 PF00009 Elongation factor Tu GTP binding domain SMU_546 PF00679 Elongation factor G C-terminus SMU_546 PF14492 Elongation Factor G, domain II SMU_548 PF02875 Mur ligase family, glutamate ligase domain SMU_548 PF08245 Mur ligase middle domain SMU_549 PF04101 Glycosyltransferase family 28 C-terminal domain SMU_549 PF03033 Glycosyltransferase family 28 N-terminal domain SMU_550 PF08478 POTRA domain, FtsQ-type SMU_551 PF11983 Membrane-attachment and polymerisation-promoting switch SMU_551 PF02491 SHS2 domain inserted in FTSA SMU_552 PF12327 FtsZ family, C-terminal domain SMU_552 PF00091 Tubulin/FtsZ family, GTPase domain SMU_553 PF01168 Alanine racemase, N-terminal domain SMU_554 PF04472 Cell division protein SepF SMU_556 PF17774 Putative RNA-binding domain in YlmH SMU_556 PF01479 S4 domain SMU_557 PF05103 DivIVA protein SMU_558 PF00133 tRNA synthetases class I (I, L, M and V) SMU_558 PF06827 Zinc finger found in FPG and IleRS SMU_558 PF08264 Anticodon-binding domain of tRNA SMU_562 PF07724 AAA domain (Cdc48 subfamily) SMU_562 PF00004 ATPase family associated with various cellular activities (AAA) SMU_562 PF17871 AAA lid domain SMU_562 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_563 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMU_563 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMU_564 PF08796 Protein of unknown function (DUF1797) SMU_565c PF00665 Integrase core domain SMU_565c PF13333 Integrase core domain SMU_567 PF00528 Binding-protein-dependent transport system inner membrane component SMU_568 PF00005 ABC transporter SMU_570 PF17910 FeoB cytosolic helical domain SMU_570 PF07664 Ferrous iron transport protein B C terminus SMU_570 PF07670 Nucleoside recognition SMU_570 PF02421 Ferrous iron transport protein B SMU_572 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SMU_572 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SMU_573 PF01256 Carbohydrate kinase SMU_574c PF04172 LrgB-like family SMU_575c PF03788 LrgA family SMU_576 PF00072 Response regulator receiver domain SMU_576 PF04397 LytTr DNA-binding domain SMU_577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_577 PF07694 5TMR of 5TMR-LYT SMU_577 PF06580 Histidine kinase SMU_580 PF02601 Exonuclease VII, large subunit SMU_580 PF13742 OB-fold nucleic acid binding domain SMU_581 PF02609 Exonuclease VII small subunit SMU_582 PF00348 Polyprenyl synthetase SMU_583 PF01728 FtsJ-like methyltransferase SMU_583 PF01479 S4 domain SMU_584 PF01316 Arginine repressor, DNA binding domain SMU_584 PF02863 Arginine repressor, C-terminal domain SMU_585 PF13476 AAA domain SMU_586 PF02645 Uncharacterised protein, DegV family COG1307 SMU_587 PF13472 GDSL-like Lipase/Acylhydrolase family SMU_589 PF00216 Bacterial DNA-binding protein SMU_59 PF10397 Adenylosuccinate lyase C-terminus SMU_59 PF00206 Lyase SMU_590c PF00665 Integrase core domain SMU_590c PF13333 Integrase core domain SMU_592c PF00440 Bacterial regulatory proteins, tetR family SMU_593 PF01475 Ferric uptake regulator family SMU_595 PF01180 Dihydroorotate dehydrogenase SMU_596 PF00300 Histidine phosphatase superfamily (branch 1) SMU_597 PF03717 Penicillin-binding Protein dimerisation domain SMU_597 PF00905 Penicillin binding protein transpeptidase domain SMU_598 PF02132 RecR protein SMU_598 PF13662 Toprim domain SMU_599 PF01820 D-ala D-ala ligase N-terminus SMU_599 PF07478 D-ala D-ala ligase C-terminus SMU_600c PF07155 ECF-type riboflavin transporter, S component SMU_602 PF01758 Sodium Bile acid symporter family SMU_603 PF08245 Mur ligase middle domain SMU_603 PF02875 Mur ligase family, glutamate ligase domain SMU_603 PF01225 Mur ligase family, catalytic domain SMU_608 PF16658 Class II release factor RF3, C-terminal domain SMU_608 PF03144 Elongation factor Tu domain 2 SMU_608 PF00009 Elongation factor Tu GTP binding domain SMU_609 PF00746 LPXTG cell wall anchor motif SMU_609 PF07501 G5 domain SMU_609 PF04650 YSIRK type signal peptide SMU_609 PF17041 E domain SMU_610 PF00746 LPXTG cell wall anchor motif SMU_610 PF18652 Adhesin P1 N-terminal domain SMU_610 PF17998 Cell surface antigen I/II C2 terminal domain SMU_610 PF16364 Cell surface antigen C-terminus SMU_610 PF08363 Glucan-binding protein C SMU_610 PF06696 Streptococcal surface antigen repeat SMU_611 PF00270 DEAD/DEAH box helicase SMU_611 PF00271 Helicase conserved C-terminal domain SMU_621c PF05175 Methyltransferase small domain SMU_623c PF01522 Polysaccharide deacetylase SMU_624 PF01553 Acyltransferase SMU_625 PF10531 SLBB domain SMU_626 PF00753 Metallo-beta-lactamase superfamily SMU_626 PF13567 Domain of unknown function (DUF4131) SMU_626 PF03772 Competence protein SMU_629 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMU_629 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMU_634 PF02547 Queuosine biosynthesis protein SMU_636 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SMU_638 PF00849 RNA pseudouridylate synthase SMU_638 PF01479 S4 domain SMU_64 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMU_64 PF17864 RuvB AAA lid domain SMU_64 PF05491 RuvB C-terminal winged helix domain SMU_640c PF00155 Aminotransferase class I and II SMU_640c PF00392 Bacterial regulatory proteins, gntR family SMU_641 PF14765 Polyketide synthase dehydratase SMU_641 PF00550 Phosphopantetheine attachment site SMU_641 PF08659 KR domain SMU_641 PF02801 Beta-ketoacyl synthase, C-terminal domain SMU_641 PF00109 Beta-ketoacyl synthase, N-terminal domain SMU_641 PF16197 Ketoacyl-synthetase C-terminal extension SMU_641 PF00107 Zinc-binding dehydrogenase SMU_641 PF08240 Alcohol dehydrogenase GroES-like domain SMU_641 PF00698 Acyl transferase domain SMU_645 PF08439 Oligopeptidase F SMU_645 PF01432 Peptidase family M3 SMU_646 PF00475 Imidazoleglycerol-phosphate dehydratase SMU_647 PF01596 O-methyltransferase SMU_648 PF13145 PPIC-type PPIASE domain SMU_65 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMU_650 PF02272 DHHA1 domain SMU_650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMU_650 PF01411 tRNA synthetases class II (A) SMU_652c PF00005 ABC transporter SMU_654 PF00005 ABC transporter SMU_659 PF00486 Transcriptional regulatory protein, C terminal SMU_659 PF00072 Response regulator receiver domain SMU_660 PF00512 His Kinase A (phospho-acceptor) domain SMU_660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_663 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMU_663 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMU_664 PF01960 ArgJ family SMU_665 PF00696 Amino acid kinase family SMU_666 PF00202 Aminotransferase class-III SMU_667 PF00268 Ribonucleotide reductase, small chain SMU_668c PF02867 Ribonucleotide reductase, barrel domain SMU_668c PF00317 Ribonucleotide reductase, all-alpha domain SMU_668c PF08343 Ribonucleotide reductase N-terminal SMU_669c PF00462 Glutaredoxin SMU_67 PF01757 Acyltransferase family SMU_670 PF00694 Aconitase C-terminal domain SMU_670 PF00330 Aconitase family (aconitate hydratase) SMU_671 PF00285 Citrate synthase, C-terminal domain SMU_672 PF00180 Isocitrate/isopropylmalate dehydrogenase SMU_674 PF00381 PTS HPr component phosphorylation site SMU_675 PF02896 PEP-utilising enzyme, TIM barrel domain SMU_675 PF05524 PEP-utilising enzyme, N-terminal SMU_675 PF00391 PEP-utilising enzyme, mobile domain SMU_676 PF00171 Aldehyde dehydrogenase family SMU_677 PF13411 MerR HTH family regulatory protein SMU_678 PF00248 Aldo/keto reductase family SMU_679 PF00248 Aldo/keto reductase family SMU_681 PF01661 Macro domain SMU_682 PF00350 Dynamin family SMU_689 PF08239 Bacterial SH3 domain SMU_689 PF01183 Glycosyl hydrolases family 25 SMU_691 PF07687 Peptidase dimerisation domain SMU_691 PF01546 Peptidase family M20/M25/M40 SMU_696 PF02224 Cytidylate kinase SMU_697 PF00707 Translation initiation factor IF-3, C-terminal domain SMU_697 PF05198 Translation initiation factor IF-3, N-terminal domain SMU_698 PF01632 Ribosomal protein L35 SMU_699 PF00453 Ribosomal protein L20 SMU_70 PF14821 Threonine synthase N terminus SMU_70 PF00291 Pyridoxal-phosphate dependent enzyme SMU_700c PF00300 Histidine phosphatase superfamily (branch 1) SMU_702c PF04073 Aminoacyl-tRNA editing domain SMU_704c PF01510 N-acetylmuramoyl-L-alanine amidase SMU_704c PF13457 GW (Gly-Tryp) dipeptide domain SMU_706c PF09515 Thiamine transporter protein (Thia_YuaJ) SMU_71 PF01554 MatE SMU_712 PF00311 Phosphoenolpyruvate carboxylase SMU_713 PF01098 Cell cycle protein SMU_714 PF03143 Elongation factor Tu C-terminal domain SMU_714 PF03144 Elongation factor Tu domain 2 SMU_714 PF00009 Elongation factor Tu GTP binding domain SMU_715 PF00121 Triosephosphate isomerase SMU_717 PF02388 FemAB family SMU_719c PF01966 HD domain SMU_723 PF00690 Cation transporter/ATPase, N-terminus SMU_723 PF00689 Cation transporting ATPase, C-terminus SMU_724 PF03009 Glycerophosphoryl diester phosphodiesterase family SMU_727 PF09278 MerR, DNA binding SMU_727 PF00376 MerR family regulatory protein SMU_728 PF00107 Zinc-binding dehydrogenase SMU_728 PF08240 Alcohol dehydrogenase GroES-like domain SMU_73 PF05167 Uncharacterised ACR (DUF711) SMU_731 PF00005 ABC transporter SMU_744 PF02881 SRP54-type protein, helical bundle domain SMU_744 PF00448 SRP54-type protein, GTPase domain SMU_745 PF07690 Major Facilitator Superfamily SMU_746c PF09323 Domain of unknown function (DUF1980) SMU_747c PF03773 Predicted permease SMU_75 PF02557 D-alanyl-D-alanine carboxypeptidase SMU_751 PF17674 HHH domain SMU_751 PF16921 Tex protein YqgF-like domain SMU_751 PF09371 Tex-like protein N-terminal domain SMU_751 PF00575 S1 RNA binding domain SMU_752 PF10263 SprT-like family SMU_754 PF07475 HPr Serine kinase C-terminal domain SMU_754 PF02603 HPr Serine kinase N terminus SMU_755 PF01790 Prolipoprotein diacylglyceryl transferase SMU_757 PF12732 YtxH-like protein SMU_76 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMU_76 PF13457 GW (Gly-Tryp) dipeptide domain SMU_761 PF16325 Peptidase family U32 C-terminal domain SMU_761 PF01136 Peptidase family U32 SMU_764 PF00578 AhpC/TSA family SMU_765 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_765 PF13192 Thioredoxin domain SMU_767 PF00665 Integrase core domain SMU_767 PF13333 Integrase core domain SMU_769 PF02229 Transcriptional Coactivator p15 (PC4) SMU_770c PF01566 Natural resistance-associated macrophage protein SMU_772 PF02324 Glycosyl hydrolase family 70 SMU_772 PF01473 Putative cell wall binding repeat SMU_773c PF00152 tRNA synthetases class II (D, K and N) SMU_773c PF01336 OB-fold nucleic acid binding domain SMU_775c PF00884 Sulfatase SMU_776 PF10672 S-adenosylmethionine-dependent methyltransferase SMU_776 PF17785 PUA-like domain SMU_777 PF01487 Type I 3-dehydroquinase SMU_778 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SMU_778 PF08501 Shikimate dehydrogenase substrate binding domain SMU_779 PF01761 3-dehydroquinate synthase SMU_78 PF02210 Laminin G domain SMU_78 PF00251 Glycosyl hydrolases family 32 N-terminal domain SMU_78 PF08244 Glycosyl hydrolases family 32 C terminal SMU_78 PF02368 Bacterial Ig-like domain (group 2) SMU_780 PF01264 Chorismate synthase SMU_781 PF02153 Prephenate dehydrogenase SMU_782 PF06133 Control of competence regulator ComK, YlbF/YmcA SMU_784 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMU_785 PF01202 Shikimate kinase SMU_786 PF00800 Prephenate dehydratase SMU_787 PF03816 Cell envelope-related transcriptional attenuator domain SMU_788 PF05958 tRNA (Uracil-5-)-methyltransferase SMU_788 PF01938 TRAM domain SMU_790 PF01381 Helix-turn-helix SMU_80 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SMU_80 PF01628 HrcA protein C terminal domain SMU_801 PF09269 Domain of unknown function (DUF1967) SMU_801 PF01018 GTP1/OBG SMU_801 PF01926 50S ribosome-binding GTPase SMU_803c PF12848 ABC transporter SMU_803c PF00005 ABC transporter SMU_803c PF16326 ABC transporter C-terminal domain SMU_805c PF00005 ABC transporter SMU_806c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_809 PF00271 Helicase conserved C-terminal domain SMU_809 PF04851 Type III restriction enzyme, res subunit SMU_809 PF02151 UvrB/uvrC motif SMU_809 PF17757 UvrB interaction domain SMU_809 PF12344 Ultra-violet resistance protein B SMU_81 PF01025 GrpE SMU_813 PF01381 Helix-turn-helix SMU_814 PF00293 NUDIX domain SMU_815 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_816 PF00155 Aminotransferase class I and II SMU_817 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_818 PF01165 Ribosomal protein S21 SMU_819 PF01741 Large-conductance mechanosensitive channel, MscL SMU_82 PF00012 Hsp70 protein SMU_821 PF01807 CHC2 zinc finger SMU_821 PF10410 DnaB-helicase binding domain of primase SMU_821 PF08275 DNA primase catalytic core, N-terminal domain SMU_822 PF04539 Sigma-70 region 3 SMU_822 PF04542 Sigma-70 region 2 SMU_822 PF00140 Sigma-70 factor, region 1.2 SMU_822 PF03979 Sigma-70 factor, region 1.1 SMU_822 PF04545 Sigma-70, region 4 SMU_823 PF01883 Iron-sulfur cluster assembly protein SMU_824 PF04321 RmlD substrate binding domain SMU_826 PF00535 Glycosyl transferase family 2 SMU_828 PF00005 ABC transporter SMU_829 PF00535 Glycosyl transferase family 2 SMU_83 PF01556 DnaJ C terminal domain SMU_83 PF00226 DnaJ domain SMU_83 PF00684 DnaJ central domain SMU_831 PF00884 Sulfatase SMU_833 PF00535 Glycosyl transferase family 2 SMU_836 PF05257 CHAP domain SMU_836 PF01476 LysM domain SMU_837 PF00248 Aldo/keto reductase family SMU_838 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_838 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_839 PF08245 Mur ligase middle domain SMU_839 PF02875 Mur ligase family, glutamate ligase domain SMU_84 PF01416 tRNA pseudouridine synthase SMU_841 PF00266 Aminotransferase class-V SMU_842 PF02568 Thiamine biosynthesis protein (ThiI) SMU_842 PF02926 THUMP domain SMU_845 PF06736 Protein of unknown function (DUF1211) SMU_846 PF00829 Ribosomal prokaryotic L21 protein SMU_849 PF01016 Ribosomal L27 protein SMU_85 PF08543 Phosphomethylpyrimidine kinase SMU_851 PF09297 NADH pyrophosphatase zinc ribbon domain SMU_851 PF00293 NUDIX domain SMU_852 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_852 PF03466 LysR substrate binding domain SMU_853 PF01252 Signal peptidase (SPase) II SMU_854 PF01479 S4 domain SMU_854 PF00849 RNA pseudouridylate synthase SMU_856 PF00156 Phosphoribosyl transferase domain SMU_857 PF00860 Permease family SMU_858 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMU_858 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMU_859 PF00117 Glutamine amidotransferase class-I SMU_859 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SMU_86 PF07155 ECF-type riboflavin transporter, S component SMU_860 PF02142 MGS-like domain SMU_860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SMU_860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMU_863 PF00005 ABC transporter SMU_864 PF12704 MacB-like periplasmic core domain SMU_864 PF02687 FtsX-like permease family SMU_865 PF00886 Ribosomal protein S16 SMU_867 PF05239 PRC-barrel domain SMU_867 PF01782 RimM N-terminal domain SMU_868 PF01746 tRNA (Guanine-1)-methyltransferase SMU_869 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_87 PF04260 Protein of unknown function (DUF436) SMU_870 PF08220 DeoR-like helix-turn-helix domain SMU_870 PF00455 DeoR C terminal sensor domain SMU_871 PF00294 pfkB family carbohydrate kinase SMU_872 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_872 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_873 PF08267 Cobalamin-independent synthase, N-terminal domain SMU_873 PF01717 Cobalamin-independent synthase, Catalytic domain SMU_874 PF02219 Methylenetetrahydrofolate reductase SMU_874 PF02574 Homocysteine S-methyltransferase SMU_876 PF12833 Helix-turn-helix domain SMU_876 PF02311 AraC-like ligand binding domain SMU_877 PF16874 Glycosyl hydrolase family 36 C-terminal domain SMU_877 PF16875 Glycosyl hydrolase family 36 N-terminal domain SMU_878 PF01547 Bacterial extracellular solute-binding protein SMU_879 PF00528 Binding-protein-dependent transport system inner membrane component SMU_880 PF00528 Binding-protein-dependent transport system inner membrane component SMU_881 PF00128 Alpha amylase, catalytic domain SMU_882 PF00005 ABC transporter SMU_882 PF17912 MalK OB fold domain SMU_882 PF03459 TOBE domain SMU_883 PF00128 Alpha amylase, catalytic domain SMU_885 PF00356 Bacterial regulatory proteins, lacI family SMU_886 PF08544 GHMP kinases C terminal SMU_886 PF00288 GHMP kinases N terminal domain SMU_886 PF10509 Galactokinase galactose-binding signature SMU_887 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SMU_887 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SMU_888 PF16363 GDP-mannose 4,6 dehydratase SMU_88c PF00924 Mechanosensitive ion channel SMU_891 PF12161 HsdM N-terminal domain SMU_891 PF02384 N-6 DNA Methylase SMU_892 PF01420 Type I restriction modification DNA specificity domain SMU_897 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SMU_897 PF18766 SWI2/SNF2 ATPase SMU_897 PF12008 Type I restriction and modification enzyme - subunit R C terminal SMU_899 PF02645 Uncharacterised protein, DegV family COG1307 SMU_900 PF01113 Dihydrodipicolinate reductase, N-terminus SMU_900 PF05173 Dihydrodipicolinate reductase, C-terminus SMU_901 PF13735 tRNA nucleotidyltransferase domain 2 putative SMU_901 PF12627 Probable RNA and SrmB- binding site of polymerase A SMU_901 PF01743 Poly A polymerase head domain SMU_902 PF16326 ABC transporter C-terminal domain SMU_902 PF00005 ABC transporter SMU_902 PF12848 ABC transporter SMU_905 PF00005 ABC transporter SMU_905 PF00664 ABC transporter transmembrane region SMU_906 PF00005 ABC transporter SMU_906 PF00664 ABC transporter transmembrane region SMU_91 PF05697 Bacterial trigger factor protein (TF) SMU_91 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMU_91 PF05698 Bacterial trigger factor protein (TF) C-terminus SMU_910 PF02324 Glycosyl hydrolase family 70 SMU_910 PF01473 Putative cell wall binding repeat SMU_913 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMU_913 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMU_915c PF14489 QueF-like protein SMU_916c PF04055 Radical SAM superfamily SMU_919c PF06508 Queuosine biosynthesis protein QueC SMU_922 PF00005 ABC transporter SMU_922 PF00664 ABC transporter transmembrane region SMU_923 PF00005 ABC transporter SMU_923 PF00664 ABC transporter transmembrane region SMU_924 PF08534 Redoxin SMU_926 PF04607 Region found in RelA / SpoT proteins SMU_927 PF00486 Transcriptional regulatory protein, C terminal SMU_927 PF00072 Response regulator receiver domain SMU_928 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_928 PF00512 His Kinase A (phospho-acceptor) domain SMU_929c PF06993 Protein of unknown function (DUF1304) SMU_930c PF03466 LysR substrate binding domain SMU_930c PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_933 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_934 PF00528 Binding-protein-dependent transport system inner membrane component SMU_935 PF00528 Binding-protein-dependent transport system inner membrane component SMU_936 PF00005 ABC transporter SMU_938 PF08544 GHMP kinases C terminal SMU_938 PF00288 GHMP kinases N terminal domain SMU_939 PF01070 FMN-dependent dehydrogenase SMU_940c PF03006 Haemolysin-III related SMU_942 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SMU_943c PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SMU_943c PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SMU_944 PF00303 Thymidylate synthase SMU_946 PF04973 Nicotinamide mononucleotide transporter SMU_947 PF00186 Dihydrofolate reductase SMU_949 PF06689 ClpX C4-type zinc finger SMU_949 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_949 PF07724 AAA domain (Cdc48 subfamily) SMU_950 PF01926 50S ribosome-binding GTPase SMU_951 PF00324 Amino acid permease SMU_952 PF02574 Homocysteine S-methyltransferase SMU_953c PF00392 Bacterial regulatory proteins, gntR family SMU_953c PF00155 Aminotransferase class I and II SMU_956 PF00004 ATPase family associated with various cellular activities (AAA) SMU_956 PF07724 AAA domain (Cdc48 subfamily) SMU_956 PF17871 AAA lid domain SMU_956 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_957 PF00466 Ribosomal protein L10 SMU_96 PF05066 HB1, ASXL, restriction endonuclease HTH domain SMU_960 PF00542 Ribosomal protein L7/L12 C-terminal domain SMU_960 PF16320 Ribosomal protein L7/L12 dimerisation domain SMU_962 PF02770 Acyl-CoA dehydrogenase, middle domain SMU_962 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMU_962 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMU_963c PF01522 Polysaccharide deacetylase SMU_965 PF00742 Homoserine dehydrogenase SMU_965 PF03447 Homoserine dehydrogenase, NAD binding domain SMU_966 PF00288 GHMP kinases N terminal domain SMU_966 PF08544 GHMP kinases C terminal SMU_967 PF02875 Mur ligase family, glutamate ligase domain SMU_967 PF08245 Mur ligase middle domain SMU_968 PF01227 GTP cyclohydrolase I SMU_969 PF00809 Pterin binding enzyme SMU_97 PF00117 Glutamine amidotransferase class-I SMU_97 PF06418 CTP synthase N-terminus SMU_970 PF02152 Dihydroneopterin aldolase SMU_971 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SMU_972 PF01565 FAD binding domain SMU_972 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SMU_973 PF08402 TOBE domain SMU_973 PF00005 ABC transporter SMU_974 PF00528 Binding-protein-dependent transport system inner membrane component SMU_975 PF00528 Binding-protein-dependent transport system inner membrane component SMU_976 PF13416 Bacterial extracellular solute-binding protein SMU_977 PF00874 PRD domain SMU_977 PF03123 CAT RNA binding domain SMU_980 PF02378 Phosphotransferase system, EIIC SMU_980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_980 PF00367 phosphotransferase system, EIIB SMU_983 PF12833 Helix-turn-helix domain SMU_983 PF00072 Response regulator receiver domain SMU_985 PF00232 Glycosyl hydrolase family 1 SMU_987 PF05737 Collagen binding domain SMU_987 PF17961 Bacterial Ig domain SMU_987 PF00746 LPXTG cell wall anchor motif SMU_988 PF13091 PLD-like domain SMU_989 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMU_989 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMU_99 PF01116 Fructose-bisphosphate aldolase class-II SMU_990 PF00701 Dihydrodipicolinate synthetase family SMU_993 PF01926 50S ribosome-binding GTPase SMU_994 PF01351 Ribonuclease HII SMU_995 PF01032 FecCD transport family SMU_996 PF01032 FecCD transport family SMU_997 PF00005 ABC transporter SMU_998 PF01497 Periplasmic binding protein