SMU_01 PF00308 Bacterial dnaA protein SMU_01 PF08299 Bacterial dnaA protein helix-turn-helix SMU_02 PF00712 DNA polymerase III beta subunit, N-terminal domain SMU_02 PF02767 DNA polymerase III beta subunit, central domain SMU_02 PF02768 DNA polymerase III beta subunit, C-terminal domain SMU_05 PF06107 SMU_05 SMU_06 PF01926 50S ribosome-binding GTPase SMU_06 PF06071 Protein of unknown function (DUF933) SMU_07 PF01195 Peptidyl-tRNA hydrolase SMU_08 PF00270 DEAD/DEAH box helicase SMU_08 PF00271 Helicase conserved C-terminal domain SMU_08 PF02559 CarD-like/TRCF domain SMU_08 PF03461 TRCF domain SMU_09 PF01479 S4 domain SMU_10 PF04977 Septum formation initiator SMU_100 PF03830 PTS system sorbose subfamily IIB component SMU_1001 PF02481 DNA recombination-mediator protein A SMU_1002 PF01131 DNA topoisomerase SMU_1002 PF01396 SMU_1002 SMU_1002 PF01751 Toprim domain SMU_1003 PF01134 Glucose inhibited division protein A SMU_1004 PF01473 Putative cell wall binding repeat SMU_1004 PF02324 Glycosyl hydrolase family 70 SMU_1005 PF01473 Putative cell wall binding repeat SMU_1005 PF02324 Glycosyl hydrolase family 70 SMU_1006 PF00005 ABC transporter SMU_1007 PF02687 SMU_1007 SMU_1008 PF00072 Response regulator receiver domain SMU_1008 PF00486 Transcriptional regulatory protein, C terminal SMU_1009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_101 PF03609 SMU_101 SMU_1010 PF00583 Acetyltransferase (GNAT) family SMU_1010 PF08218 Citrate lyase ligase C-terminal domain SMU_1011 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SMU_1012c PF00392 Bacterial regulatory proteins, gntR family SMU_1012c PF07729 FCD domain SMU_1013c PF03600 Citrate transporter SMU_1016 PF00364 Biotin-requiring enzyme SMU_1017 PF03977 SMU_1017 SMU_1018 PF04277 SMU_1018 SMU_1019 PF06857 SMU_1019 SMU_102 PF03613 SMU_102 SMU_1020 PF03328 HpcH/HpaI aldolase/citrate lyase family SMU_1021 PF04223 Citrate lyase, alpha subunit (CitF) SMU_1022 PF03802 SMU_1022 SMU_1023 PF00682 HMGL-like SMU_1023 PF02436 Conserved carboxylase domain SMU_1024c PF13333 SMU_1024c SMU_1025 PF01047 MarR family SMU_1027 PF00440 Bacterial regulatory proteins, tetR family SMU_1028 PF00561 alpha/beta hydrolase fold SMU_103 PF03610 PTS system fructose IIA component SMU_1030 PF12645 SMU_1030 SMU_1031 PF09035 Excisionase from transposon Tn916 SMU_1032 PF00589 Phage integrase family SMU_1032 PF02920 DNA binding domain of tn916 integrase SMU_1034c PF00589 Phage integrase family SMU_1034c PF13495 Phage integrase, N-terminal SAM-like domain SMU_1035 PF00005 ABC transporter SMU_1036 PF12730 SMU_1036 SMU_1037c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1038c PF00072 Response regulator receiver domain SMU_1038c PF00486 Transcriptional regulatory protein, C terminal SMU_1039c PF01501 Glycosyl transferase family 8 SMU_104 PF01055 Glycosyl hydrolases family 31 SMU_1040c PF00106 short chain dehydrogenase SMU_1041 PF00005 ABC transporter SMU_1043c PF01515 Phosphate acetyl/butaryl transferase SMU_1044c PF00849 RNA pseudouridylate synthase SMU_1045c PF01513 ATP-NAD kinase SMU_1046c PF04607 Region found in RelA / SpoT proteins SMU_1048 PF01928 CYTH domain SMU_105 PF00356 Bacterial regulatory proteins, lacI family SMU_105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SMU_1050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMU_1050 PF14572 Phosphoribosyl synthetase-associated domain SMU_1051 PF00266 Aminotransferase class-V SMU_1052 PF08866 Putative amino acid metabolism SMU_1053 PF02629 CoA binding domain SMU_1053 PF06971 Putative DNA-binding protein N-terminus SMU_1054 PF07722 Peptidase C26 SMU_1055 PF04002 RadC-like JAB domain SMU_1057 PF11750 SMU_1057 SMU_1058 PF16264 SMU_1058 SMU_1060 PF00448 SRP54-type protein, GTPase domain SMU_1060 PF02881 SRP54-type protein, helical bundle domain SMU_1060 PF02978 Signal peptide binding domain SMU_1061 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SMU_1062 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1062 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SMU_1063 PF00005 ABC transporter SMU_1063 PF00571 CBS domain SMU_1064c PF00392 Bacterial regulatory proteins, gntR family SMU_1064c PF02080 TrkA-C domain SMU_1065c PF00392 Bacterial regulatory proteins, gntR family SMU_1065c PF07702 UTRA domain SMU_1066 PF00117 Glutamine amidotransferase class-I SMU_1066 PF00958 GMP synthase C terminal domain SMU_1066 PF02540 NAD synthase SMU_1067c PF12679 SMU_1067c SMU_1068c PF00005 ABC transporter SMU_1069c PF11457 SMU_1069c SMU_106c PF13612 SMU_106c SMU_1070c PF04397 LytTr DNA-binding domain SMU_1071c PF06028 Alpha/beta hydrolase of unknown function (DUF915) SMU_1072c PF13420 Acetyltransferase (GNAT) domain SMU_1073 PF01268 Formate--tetrahydrofolate ligase SMU_1074 PF04127 DNA / pantothenate metabolism flavoprotein SMU_1075 PF02441 Flavoprotein SMU_1076 PF12822 Protein of unknown function (DUF3816) SMU_1077 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMU_1077 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMU_1077 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMU_1077 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMU_1078c PF00005 ABC transporter SMU_1078c PF00664 ABC transporter transmembrane region SMU_1079c PF00005 ABC transporter SMU_1079c PF00664 ABC transporter transmembrane region SMU_108 PF13649 Methyltransferase domain SMU_1080c PF13702 Lysozyme-like SMU_1081c PF04245 SMU_1081c SMU_1082 PF00464 Serine hydroxymethyltransferase SMU_1083c PF01300 Telomere recombination SMU_1084 PF05175 Methyltransferase small domain SMU_1085 PF00472 RF-1 domain SMU_1085 PF03462 PCRF domain SMU_1086 PF00265 Thymidine kinase SMU_1087 PF01361 Tautomerase enzyme SMU_1088 PF02424 ApbE family SMU_1089 PF03358 NADPH-dependent FMN reductase SMU_109 PF05977 Transmembrane secretion effector SMU_1090 PF03358 NADPH-dependent FMN reductase SMU_1090 PF13596 PAS domain SMU_1093 PF02687 SMU_1093 SMU_1094 PF00005 ABC transporter SMU_1095 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SMU_1096 PF00005 ABC transporter SMU_1097c PF01047 MarR family SMU_1098c PF08240 Alcohol dehydrogenase GroES-like domain SMU_1098c PF13602 Zinc-binding dehydrogenase SMU_110 PF12844 Helix-turn-helix domain SMU_1100c PF01594 SMU_1100c SMU_1102 PF00232 Glycosyl hydrolase family 1 SMU_1104c PF00300 Histidine phosphatase superfamily (branch 1) SMU_1105c PF00300 Histidine phosphatase superfamily (branch 1) SMU_1106c PF00300 Histidine phosphatase superfamily (branch 1) SMU_1107c PF13472 GDSL-like Lipase/Acylhydrolase family SMU_1108c PF08282 haloacid dehalogenase-like hydrolase SMU_1111c PF06207 SMU_1111c SMU_1112c PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMU_1113 PF04203 Sortase family SMU_1114 PF00521 DNA gyrase/topoisomerase IV, subunit A SMU_1114 PF03989 DNA gyrase C-terminal domain, beta-propeller SMU_1115 PF00056 lactate/malate dehydrogenase, NAD binding domain SMU_1115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SMU_1117 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_1117 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_1118c PF02653 SMU_1118c SMU_1119c PF02653 SMU_1119c SMU_1120 PF00005 ABC transporter SMU_1121c PF02608 Basic membrane protein SMU_1122 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMU_1123 PF01791 DeoC/LacD family aldolase SMU_1124 PF00591 Glycosyl transferase family, a/b domain SMU_1124 PF02885 Glycosyl transferase family, helical bundle domain SMU_1124 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SMU_1125c PF05175 Methyltransferase small domain SMU_1126 PF00485 Phosphoribulokinase / Uridine kinase family SMU_1127 PF01649 Ribosomal protein S20 SMU_1128 PF00512 His Kinase A (phospho-acceptor) domain SMU_1128 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1129 PF00072 Response regulator receiver domain SMU_1129 PF00486 Transcriptional regulatory protein, C terminal SMU_112c PF01380 SIS domain SMU_112c PF01418 Helix-turn-helix domain, rpiR family SMU_113 PF00294 pfkB family carbohydrate kinase SMU_1132 PF01433 Peptidase family M1 SMU_1132 PF11838 ERAP1-like C-terminal domain SMU_1133 PF01895 PhoU domain SMU_1134c PF00005 ABC transporter SMU_1135 PF00005 ABC transporter SMU_1136 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1137 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1138 PF12849 PBP superfamily domain SMU_1139c PF01189 NOL1/NOP2/sun family SMU_1139c PF13636 pre-rRNA processing and ribosome biogenesis SMU_1139c PF17125 SMU_1139c SMU_1139c PF17126 SMU_1139c SMU_114 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_114 PF02378 Phosphotransferase system, EIIC SMU_1140c PF00459 Inositol monophosphatase family SMU_1141c PF05256 Uncharacterised protein family (UPF0223) SMU_1142c PF03960 ArsC family SMU_1143c PF01687 Riboflavin kinase SMU_1143c PF06574 FAD synthetase SMU_1144 PF01509 TruB family pseudouridylate synthase (N terminal domain) SMU_1144 PF16198 SMU_1144 SMU_1145c PF00512 His Kinase A (phospho-acceptor) domain SMU_1145c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1146c PF00072 Response regulator receiver domain SMU_1146c PF00486 Transcriptional regulatory protein, C terminal SMU_1148 PF00005 ABC transporter SMU_1149 PF12730 SMU_1149 SMU_115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1150 PF12730 SMU_1150 SMU_1151c PF01814 Hemerythrin HHE cation binding domain SMU_1151c PF04282 SMU_1151c SMU_1151c PF13596 PAS domain SMU_1152c PF08984 Domain of unknown function (DUF1858) SMU_1157c PF13289 SMU_1157c SMU_1158c PF09903 SMU_1158c SMU_116 PF01791 DeoC/LacD family aldolase SMU_1161c PF14355 SMU_1161c SMU_1163c PF00005 ABC transporter SMU_1163c PF00664 ABC transporter transmembrane region SMU_1164c PF00005 ABC transporter SMU_1164c PF00664 ABC transporter transmembrane region SMU_1165c PF00440 Bacterial regulatory proteins, tetR family SMU_1166c PF02687 SMU_1166c SMU_1167c PF00005 ABC transporter SMU_1168 PF00440 Bacterial regulatory proteins, tetR family SMU_1169c PF08534 Redoxin SMU_1170 PF02683 SMU_1170 SMU_1171c PF08282 haloacid dehalogenase-like hydrolase SMU_1172c PF04199 Putative cyclase SMU_1173 PF01053 Cys/Met metabolism PLP-dependent enzyme SMU_1174 PF00580 UvrD/REP helicase N-terminal domain SMU_1174 PF13361 UvrD-like helicase C-terminal domain SMU_1175 PF01235 SMU_1175 SMU_1176 PF01545 Cation efflux family SMU_1176 PF16916 SMU_1176 SMU_1177c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1178c PF00005 ABC transporter SMU_1179c PF00528 Binding-protein-dependent transport system inner membrane component SMU_1180 PF03831 PhnA protein SMU_1180 PF08274 PhnA Zinc-Ribbon SMU_1182 PF01232 Mannitol dehydrogenase Rossmann domain SMU_1182 PF08125 Mannitol dehydrogenase C-terminal domain SMU_1183 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1184c PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1184c PF05043 Mga helix-turn-helix domain SMU_1184c PF08279 HTH domain SMU_1185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1185 PF02378 Phosphotransferase system, EIIC SMU_1187 PF01380 SIS domain SMU_1187 PF13522 Glutamine amidotransferase domain SMU_1188 PF00717 Peptidase S24-like SMU_1189c PF04226 SMU_1189c SMU_118c PF00756 Putative esterase SMU_119 PF00107 Zinc-binding dehydrogenase SMU_119 PF08240 Alcohol dehydrogenase GroES-like domain SMU_1190 PF00224 Pyruvate kinase, barrel domain SMU_1190 PF02887 Pyruvate kinase, alpha/beta domain SMU_1191 PF00365 Phosphofructokinase SMU_1192 PF01336 OB-fold nucleic acid binding domain SMU_1192 PF02811 PHP domain SMU_1192 PF07733 Bacterial DNA polymerase III alpha subunit SMU_1192 PF14579 Helix-hairpin-helix motif SMU_1193 PF00392 Bacterial regulatory proteins, gntR family SMU_1194 PF00005 ABC transporter SMU_1196c PF12978 Domain of Unknown Function with PDB structure (DUF3862) SMU_1197 PF09335 SMU_1197 SMU_12 PF13354 Beta-lactamase enzyme family SMU_120 PF00830 Ribosomal L28 family SMU_1200 PF00575 S1 RNA binding domain SMU_1201c PF11184 SMU_1201c SMU_1203 PF01063 Aminotransferase class IV SMU_1204 PF00521 DNA gyrase/topoisomerase IV, subunit A SMU_1204 PF03989 DNA gyrase C-terminal domain, beta-propeller SMU_1206c PF04607 Region found in RelA / SpoT proteins SMU_1207 PF02661 Fic/DOC family SMU_121 PF01554 MatE SMU_1210 PF00204 DNA gyrase B SMU_1210 PF00986 DNA gyrase B subunit, carboxyl terminus SMU_1210 PF01751 Toprim domain SMU_1210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1211 PF02660 SMU_1211 SMU_1213c PF00149 Calcineurin-like phosphoesterase SMU_1213c PF02872 5'-nucleotidase, C-terminal domain SMU_1214 PF01979 Amidohydrolase family SMU_1215 PF03167 Uracil DNA glycosylase superfamily SMU_1216c PF00528 Binding-protein-dependent transport system inner membrane component SMU_1217c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1218 PF01425 Amidase SMU_1219c PF04237 YjbR SMU_1220c PF01161 Phosphatidylethanolamine-binding protein SMU_1221 PF00156 Phosphoribosyl transferase domain SMU_1222 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMU_1223 PF01180 Dihydroorotate dehydrogenase SMU_1224 PF00175 Oxidoreductase NAD-binding domain SMU_1224 PF00970 Oxidoreductase FAD-binding domain SMU_1224 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SMU_1225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_1225 PF03466 LysR substrate binding domain SMU_1226c PF09659 SMU_1226c SMU_1227 PF01048 Phosphorylase superfamily SMU_1228c PF00117 Glutamine amidotransferase class-I SMU_1229 PF01048 Phosphorylase superfamily SMU_123 PF00929 Exonuclease SMU_123 PF02811 PHP domain SMU_123 PF07733 Bacterial DNA polymerase III alpha subunit SMU_123 PF11490 SMU_123 SMU_123 PF14480 SMU_123 SMU_123 PF14579 Helix-hairpin-helix motif SMU_1230c PF07799 SMU_1230c SMU_1232c PF08002 Protein of unknown function (DUF1697) SMU_1233 PF01676 Metalloenzyme superfamily SMU_1234 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SMU_1235 PF01926 50S ribosome-binding GTPase SMU_1235 PF10396 GTP-binding protein TrmE N-terminus SMU_1235 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SMU_1236c PF04909 Amidohydrolase SMU_1237c PF12680 SnoaL-like domain SMU_1238c PF03167 Uracil DNA glycosylase superfamily SMU_1239 PF01546 Peptidase family M20/M25/M40 SMU_124 PF01047 MarR family SMU_1240c PF00881 Nitroreductase family SMU_1241 PF01541 GIY-YIG catalytic domain SMU_1241 PF02151 UvrB/uvrC motif SMU_1241 PF08459 UvrC Helix-hairpin-helix N-terminal SMU_1243 PF06772 SMU_1243 SMU_1245c PF13419 Haloacid dehalogenase-like hydrolase SMU_1246c PF00440 Bacterial regulatory proteins, tetR family SMU_1247 PF00113 Enolase, C-terminal TIM barrel domain SMU_1247 PF03952 Enolase, N-terminal domain SMU_1249c PF11611 Domain of unknown function (DUF4352) SMU_125 PF03358 NADPH-dependent FMN reductase SMU_1251 PF07997 Protein of unknown function (DUF1694) SMU_1252 PF02595 Glycerate kinase family SMU_1253c PF13673 Acetyltransferase (GNAT) domain SMU_1254 PF13419 Haloacid dehalogenase-like hydrolase SMU_1255c PF14213 SMU_1255c SMU_1257c PF06414 Zeta toxin SMU_1259 PF07669 Eco57I restriction-modification methylase SMU_1260c PF05103 DivIVA protein SMU_1261c PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SMU_1263 PF01502 Phosphoribosyl-AMP cyclohydrolase SMU_1264 PF00977 Histidine biosynthesis protein SMU_1265 PF00977 Histidine biosynthesis protein SMU_1266 PF00117 Glutamine amidotransferase class-I SMU_1267c PF10823 SMU_1267c SMU_1268 PF00475 Imidazoleglycerol-phosphate dehydratase SMU_1269 PF12710 haloacid dehalogenase-like hydrolase SMU_127 PF00676 Dehydrogenase E1 component SMU_1270 PF00815 Histidinol dehydrogenase SMU_1271 PF01634 ATP phosphoribosyltransferase SMU_1272 PF13393 Histidyl-tRNA synthetase SMU_1273 PF00155 Aminotransferase class I and II SMU_1276c PF06160 SMU_1276c SMU_1277 PF00204 DNA gyrase B SMU_1277 PF00986 DNA gyrase B subunit, carboxyl terminus SMU_1277 PF01751 Toprim domain SMU_1277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1278c PF13419 Haloacid dehalogenase-like hydrolase SMU_1279c PF01098 SMU_1279c SMU_128 PF02779 Transketolase, pyrimidine binding domain SMU_128 PF02780 Transketolase, C-terminal domain SMU_1280c PF00561 alpha/beta hydrolase fold SMU_1282 PF00440 Bacterial regulatory proteins, tetR family SMU_1284c PF13460 NADH(P)-binding SMU_1286c PF07690 Major Facilitator Superfamily SMU_1287 PF13411 MerR HTH family regulatory protein SMU_1288 PF01245 Ribosomal protein L19 SMU_1289c PF00654 Voltage gated chloride channel SMU_129 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMU_129 PF00364 Biotin-requiring enzyme SMU_129 PF02817 e3 binding domain SMU_1290c PF00654 Voltage gated chloride channel SMU_1291c PF01817 Chorismate mutase type II SMU_1292c PF09335 SMU_1292c SMU_1293c PF01458 Uncharacterized protein family (UPF0051) SMU_1294 PF00258 Flavodoxin SMU_1295 PF00962 Adenosine/AMP deaminase SMU_1296 PF02798 Glutathione S-transferase, N-terminal domain SMU_1296 PF13410 Glutathione S-transferase, C-terminal domain SMU_1297 PF01368 DHH family SMU_1297 PF02272 DHHA1 domain SMU_1298 PF01197 Ribosomal protein L31 SMU_13 PF01171 PP-loop family SMU_130 PF00364 Biotin-requiring enzyme SMU_130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_1300c PF07883 Cupin domain SMU_1301c PF13649 Methyltransferase domain SMU_1302 PF01297 Periplasmic solute binding protein family SMU_1302 PF09223 YodA lipocalin-like domain SMU_1303c PF03577 SMU_1303c SMU_1304c PF02650 WhiA C-terminal HTH domain SMU_1304c PF10298 WhiA N-terminal LAGLIDADG-like domain SMU_1304c PF14527 WhiA LAGLIDADG-like domain SMU_1305c PF01933 Uncharacterised protein family UPF0052 SMU_1306c PF03668 SMU_1306c SMU_1307c PF06210 SMU_1307c SMU_1308 PF01042 Endoribonuclease L-PSP SMU_1309c PF00465 Iron-containing alcohol dehydrogenase SMU_131 PF03099 Biotin/lipoate A/B protein ligase family SMU_131 PF10437 Bacterial lipoate protein ligase C-terminus SMU_1311 PF00152 tRNA synthetases class II (D, K and N) SMU_1311 PF01336 OB-fold nucleic acid binding domain SMU_1312 PF00155 Aminotransferase class I and II SMU_1313c PF00929 Exonuclease SMU_1313c PF13307 Helicase C-terminal domain SMU_1314 PF00756 Putative esterase SMU_1315c PF00005 ABC transporter SMU_1319c PF00756 Putative esterase SMU_132 PF01546 Peptidase family M20/M25/M40 SMU_132 PF07687 Peptidase dimerisation domain SMU_1321c PF13535 ATP-grasp domain SMU_1322 PF13561 Enoyl-(Acyl carrier protein) reductase SMU_1323 PF00753 Metallo-beta-lactamase superfamily SMU_1324 PF02687 SMU_1324 SMU_1325 PF00005 ABC transporter SMU_1326 PF00472 RF-1 domain SMU_1326 PF03462 PCRF domain SMU_1327c PF08331 SMU_1327c SMU_1327c PF13484 SMU_1327c SMU_1329c PF13612 SMU_1329c SMU_1330c PF01610 SMU_1330c SMU_1331c PF01610 SMU_1331c SMU_1332c PF13542 SMU_1332c SMU_1332c PF14690 SMU_1332c SMU_1334 PF01648 4'-phosphopantetheinyl transferase superfamily SMU_1335c PF03060 Nitronate monooxygenase SMU_1336 PF00698 Acyl transferase domain SMU_1338c PF07690 Major Facilitator Superfamily SMU_1339 PF00501 AMP-binding enzyme SMU_1339 PF00550 Phosphopantetheine attachment site SMU_1339 PF00668 Condensation domain SMU_1339 PF07993 Male sterility protein SMU_1339 PF13745 HxxPF-repeated domain SMU_133c PF07690 Major Facilitator Superfamily SMU_134 PF00440 Bacterial regulatory proteins, tetR family SMU_1340 PF00501 AMP-binding enzyme SMU_1340 PF00550 Phosphopantetheine attachment site SMU_1340 PF00668 Condensation domain SMU_1341c PF00501 AMP-binding enzyme SMU_1341c PF00550 Phosphopantetheine attachment site SMU_1341c PF00668 Condensation domain SMU_1341c PF13745 HxxPF-repeated domain SMU_1342 PF00501 AMP-binding enzyme SMU_1342 PF00550 Phosphopantetheine attachment site SMU_1342 PF00668 Condensation domain SMU_1342 PF13745 HxxPF-repeated domain SMU_1343c PF00109 Beta-ketoacyl synthase, N-terminal domain SMU_1343c PF00550 Phosphopantetheine attachment site SMU_1343c PF00668 Condensation domain SMU_1343c PF02801 Beta-ketoacyl synthase, C-terminal domain SMU_1343c PF16197 SMU_1343c SMU_1344c PF00698 Acyl transferase domain SMU_1345c PF00501 AMP-binding enzyme SMU_1345c PF00550 Phosphopantetheine attachment site SMU_1346 PF00975 Thioesterase domain SMU_1347c PF02687 SMU_1347c SMU_1347c PF12704 MacB-like periplasmic core domain SMU_1348c PF00005 ABC transporter SMU_135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_135 PF03466 LysR substrate binding domain SMU_1352 PF00665 Integrase core domain SMU_1353 PF13683 SMU_1353 SMU_1355c PF13276 SMU_1355c SMU_1361c PF00440 Bacterial regulatory proteins, tetR family SMU_1363c PF01797 Transposase IS200 like SMU_1365c PF02687 SMU_1365c SMU_1365c PF12704 MacB-like periplasmic core domain SMU_1366c PF00005 ABC transporter SMU_1367c PF13847 Methyltransferase domain SMU_136c PF01381 Helix-turn-helix SMU_137 PF00390 Malic enzyme, N-terminal domain SMU_137 PF03949 Malic enzyme, NAD binding domain SMU_1370c PF00665 Integrase core domain SMU_1372c PF13518 Helix-turn-helix domain SMU_1373c PF13518 Helix-turn-helix domain SMU_1375c PF04229 GrpB protein SMU_1377c PF01300 Telomere recombination SMU_1378 PF13653 Glycerophosphoryl diester phosphodiesterase family SMU_1379 PF01527 Transposase SMU_138 PF03547 SMU_138 SMU_1380 PF00665 Integrase core domain SMU_1380 PF13276 SMU_1380 SMU_1381 PF00694 Aconitase C-terminal domain SMU_1382 PF00330 Aconitase family (aconitate hydratase) SMU_1383 PF00180 Isocitrate/isopropylmalate dehydrogenase SMU_1384 PF00682 HMGL-like SMU_1384 PF08502 LeuA allosteric (dimerisation) domain SMU_1386 PF00485 Phosphoribulokinase / Uridine kinase family SMU_1387 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMU_1387 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMU_1388 PF00270 DEAD/DEAH box helicase SMU_1388 PF00271 Helicase conserved C-terminal domain SMU_1389 PF01293 Phosphoenolpyruvate carboxykinase SMU_139 PF00190 Cupin SMU_1392c PF00583 Acetyltransferase (GNAT) family SMU_1394 PF00009 Elongation factor Tu GTP binding domain SMU_1394 PF00679 Elongation factor G C-terminus SMU_1394 PF03144 Elongation factor Tu domain 2 SMU_1394 PF06421 GTP-binding protein LepA C-terminus SMU_1394 PF14492 Elongation Factor G, domain II SMU_1396 PF08363 Glucan-binding protein C SMU_1397c PF01381 Helix-turn-helix SMU_1398 PF00717 Peptidase S24-like SMU_1398 PF01381 Helix-turn-helix SMU_14 PF00156 Phosphoribosyl transferase domain SMU_140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_140 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_1400c PF15919 SMU_1400c SMU_1402c PF09711 CRISPR-associated protein (Cas_Csn2) SMU_1403c PF09827 CRISPR associated protein Cas2 SMU_1404c PF01867 CRISPR associated protein Cas1 SMU_1405c PF13395 HNH endonuclease SMU_1405c PF16592 SMU_1405c SMU_1405c PF16593 SMU_1405c SMU_1405c PF16595 SMU_1405c SMU_1406c PF03358 NADPH-dependent FMN reductase SMU_1407c PF00665 Integrase core domain SMU_1407c PF13276 SMU_1407c SMU_1408c PF01527 Transposase SMU_1409c PF12833 Helix-turn-helix domain SMU_141 PF06912 SMU_141 SMU_1410 PF00890 FAD binding domain SMU_1411 PF07690 Major Facilitator Superfamily SMU_1412c PF00005 ABC transporter SMU_1412c PF02687 SMU_1412c SMU_1414c PF07314 SMU_1414c SMU_1415c PF13242 HAD-hyrolase-like SMU_1415c PF13344 Haloacid dehalogenase-like hydrolase SMU_1416c PF00293 NUDIX domain SMU_1416c PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal SMU_1417c PF01643 Acyl-ACP thioesterase SMU_1418 PF04055 Radical SAM superfamily SMU_1418 PF06969 HemN C-terminal domain SMU_1419 PF00440 Bacterial regulatory proteins, tetR family SMU_1419 PF13305 WHG domain SMU_1420 PF02525 Flavodoxin-like fold SMU_1421 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMU_1421 PF00364 Biotin-requiring enzyme SMU_1421 PF02817 e3 binding domain SMU_1422 PF02779 Transketolase, pyrimidine binding domain SMU_1422 PF02780 Transketolase, C-terminal domain SMU_1423 PF00676 Dehydrogenase E1 component SMU_1424 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_1424 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_1425 PF00004 ATPase family associated with various cellular activities (AAA) SMU_1425 PF02861 Clp amino terminal domain SMU_1425 PF07724 AAA domain (Cdc48 subfamily) SMU_1425 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_1426c PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMU_1426c PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMU_1426c PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMU_1426c PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMU_1427c PF07949 YbbR-like protein SMU_1428c PF02457 DisA bacterial checkpoint controller nucleotide-binding SMU_1429 PF08245 Mur ligase middle domain SMU_1429 PF08353 SMU_1429 SMU_1430 PF07685 CobB/CobQ-like glutamine amidotransferase domain SMU_1431c PF00005 ABC transporter SMU_1431c PF12848 ABC transporter SMU_1431c PF16326 SMU_1431c SMU_1432c PF01270 Glycosyl hydrolases family 8 SMU_1434c PF13641 Glycosyltransferase like family 2 SMU_1437 PF02350 UDP-N-acetylglucosamine 2-epimerase SMU_1438c PF00413 Matrixin SMU_143c PF01327 Polypeptide deformylase SMU_1442c PF06998 Protein of unknown function (DUF1307) SMU_1443c PF00756 Putative esterase SMU_1444c PF00753 Metallo-beta-lactamase superfamily SMU_1444c PF07521 RNA-metabolising metallo-beta-lactamase SMU_1445c PF00005 ABC transporter SMU_1446c PF02653 SMU_1446c SMU_1447c PF04392 ABC transporter substrate binding protein SMU_1449 PF05670 SMU_1449 SMU_1449 PF05833 Fibronectin-binding protein A N-terminus (FbpA) SMU_144c PF00027 Cyclic nucleotide-binding domain SMU_145 PF07690 Major Facilitator Superfamily SMU_1450 PF00324 Amino acid permease SMU_1451 PF03306 Alpha-acetolactate decarboxylase SMU_1452 PF00205 Thiamine pyrophosphate enzyme, central domain SMU_1452 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMU_1452 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMU_1453c PF13181 Tetratricopeptide repeat SMU_1454c PF01594 SMU_1454c SMU_1455 PF00293 NUDIX domain SMU_1457 PF16363 SMU_1457 SMU_1460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SMU_1461 PF00483 Nucleotidyl transferase SMU_1462c PF01266 FAD dependent oxidoreductase SMU_1463c PF01784 NIF3 (NGG1p interacting factor 3) SMU_1464c PF04816 Family of unknown function (DUF633) SMU_1465c PF07261 Replication initiation and membrane attachment SMU_1466 PF04204 Homoserine O-succinyltransferase SMU_1467 PF00156 Phosphoribosyl transferase domain SMU_1470c PF06445 GyrI-like small molecule binding domain SMU_1471c PF08279 HTH domain SMU_1471c PF13280 SMU_1471c SMU_1472 PF01368 DHH family SMU_1472 PF02272 DHHA1 domain SMU_1472 PF10141 SMU_1472 SMU_1473c PF00106 short chain dehydrogenase SMU_1474c PF00753 Metallo-beta-lactamase superfamily SMU_1474c PF12706 Beta-lactamase superfamily domain SMU_1476c PF01926 50S ribosome-binding GTPase SMU_1476c PF13167 SMU_1476c SMU_1476c PF16360 SMU_1476c SMU_1477 PF01715 IPP transferase SMU_1479 PF11240 SMU_1479 SMU_148 PF00171 Aldehyde dehydrogenase family SMU_148 PF00465 Iron-containing alcohol dehydrogenase SMU_1482c PF12697 Alpha/beta hydrolase family SMU_1483c PF13302 Acetyltransferase (GNAT) domain SMU_1484c PF10117 SMU_1484c SMU_1485c PF07728 AAA domain (dynein-related subfamily) SMU_1488c PF13024 SMU_1488c SMU_1489 PF01263 Aldose 1-epimerase SMU_149 PF01797 Transposase IS200 like SMU_1490 PF00232 Glycosyl hydrolase family 1 SMU_1491 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1491 PF02378 Phosphotransferase system, EIIC SMU_1492 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SMU_1493 PF01791 DeoC/LacD family aldolase SMU_1494 PF00294 pfkB family carbohydrate kinase SMU_1495 PF02502 Ribose/Galactose Isomerase SMU_1496 PF02502 Ribose/Galactose Isomerase SMU_1498 PF00455 SMU_1498 SMU_1498 PF08220 DeoR-like helix-turn-helix domain SMU_1499 PF00580 UvrD/REP helicase N-terminal domain SMU_1499 PF12705 PD-(D/E)XK nuclease superfamily SMU_1499 PF13361 UvrD-like helicase C-terminal domain SMU_15 PF00004 ATPase family associated with various cellular activities (AAA) SMU_15 PF01434 Peptidase family M41 SMU_15 PF06480 FtsH Extracellular SMU_150 PF10439 SMU_150 SMU_1500 PF12705 PD-(D/E)XK nuclease superfamily SMU_1502c PF03083 Sugar efflux transporter for intercellular exchange SMU_1505c PF03147 Ferredoxin-fold anticodon binding domain SMU_1506c PF01554 MatE SMU_1507c PF05402 Coenzyme PQQ synthesis protein D (PqqD) SMU_1508c PF04055 Radical SAM superfamily SMU_1508c PF13186 Iron-sulfur cluster-binding domain SMU_1508c PF13353 4Fe-4S single cluster domain SMU_1509 PF12844 Helix-turn-helix domain SMU_151 PF10439 SMU_151 SMU_1510 PF01588 Putative tRNA binding domain SMU_1510 PF03147 Ferredoxin-fold anticodon binding domain SMU_1510 PF03483 B3/4 domain SMU_1510 PF03484 tRNA synthetase B5 domain SMU_1511c PF00583 Acetyltransferase (GNAT) family SMU_1512 PF01409 tRNA synthetases class II core domain (F) SMU_1512 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SMU_1513 PF02463 RecF/RecN/SMC N terminal domain SMU_1513 PF06470 SMC proteins Flexible Hinge Domain SMU_1514 PF00035 Double-stranded RNA binding motif SMU_1514 PF14622 Ribonuclease-III-like SMU_1515 PF12706 Beta-lactamase superfamily domain SMU_1516 PF00512 His Kinase A (phospho-acceptor) domain SMU_1516 PF00989 PAS fold SMU_1516 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1517 PF00072 Response regulator receiver domain SMU_1517 PF00486 Transcriptional regulatory protein, C terminal SMU_1519 PF00005 ABC transporter SMU_1520 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1521 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1522 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1523 PF01223 DNA/RNA non-specific endonuclease SMU_1524c PF11772 SMU_1524c SMU_1525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMU_1526c PF06612 SMU_1526c SMU_1527 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SMU_1527 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SMU_1528 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMU_1528 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMU_1529 PF00231 ATP synthase SMU_1530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMU_1530 PF00306 ATP synthase alpha/beta chain, C terminal domain SMU_1530 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMU_1531 PF00213 ATP synthase delta (OSCP) subunit SMU_1532 PF00430 ATP synthase B/B' CF(0) SMU_1533 PF00119 ATP synthase A chain SMU_1534 PF00137 ATP synthase subunit C SMU_1535 PF00343 Carbohydrate phosphorylase SMU_1536 PF00534 Glycosyl transferases group 1 SMU_1536 PF08323 Starch synthase catalytic domain SMU_1537 PF00483 Nucleotidyl transferase SMU_1538 PF00483 Nucleotidyl transferase SMU_1539 PF00128 Alpha amylase, catalytic domain SMU_1539 PF02806 Alpha amylase, C-terminal all-beta domain SMU_1539 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMU_154 PF00312 Ribosomal protein S15 SMU_1541 PF00128 Alpha amylase, catalytic domain SMU_1541 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMU_1542c PF00781 Diacylglycerol kinase catalytic domain SMU_1543 PF00533 BRCA1 C Terminus (BRCT) domain SMU_1543 PF01653 NAD-dependent DNA ligase adenylation domain SMU_1543 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SMU_1543 PF03120 NAD-dependent DNA ligase OB-fold domain SMU_1543 PF12826 Helix-hairpin-helix motif SMU_1543 PF14520 Helix-hairpin-helix domain SMU_1545c PF06177 SMU_1545c SMU_1546 PF04138 SMU_1546 SMU_1547c PF00072 Response regulator receiver domain SMU_1547c PF00196 Bacterial regulatory proteins, luxR family SMU_1548c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1548c PF07730 Histidine kinase SMU_155 PF00013 KH domain SMU_155 PF00575 S1 RNA binding domain SMU_155 PF01138 3' exoribonuclease family, domain 1 SMU_155 PF03725 3' exoribonuclease family, domain 2 SMU_155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SMU_1550c PF01061 SMU_1550c SMU_1551c PF00005 ABC transporter SMU_1555c PF03631 SMU_1555c SMU_1556 PF00557 Metallopeptidase family M24 SMU_1557c PF00392 Bacterial regulatory proteins, gntR family SMU_1557c PF00571 CBS domain SMU_1557c PF07085 DRTGG domain SMU_1558c PF13302 Acetyltransferase (GNAT) domain SMU_156 PF07179 SMU_156 SMU_1560 PF00892 EamA-like transporter family SMU_1561 PF02080 TrkA-C domain SMU_1561 PF02254 TrkA-N domain SMU_1562 PF02080 TrkA-C domain SMU_1562 PF02254 TrkA-N domain SMU_1563 PF00122 E1-E2 ATPase SMU_1563 PF00689 Cation transporting ATPase, C-terminus SMU_1563 PF00690 Cation transporter/ATPase, N-terminus SMU_1563 PF00702 haloacid dehalogenase-like hydrolase SMU_1564 PF00343 Carbohydrate phosphorylase SMU_1565 PF02446 4-alpha-glucanotransferase SMU_1566 PF00356 Bacterial regulatory proteins, lacI family SMU_1566 PF13377 Periplasmic binding protein-like domain SMU_1568 PF13416 Bacterial extracellular solute-binding protein SMU_1569 PF00528 Binding-protein-dependent transport system inner membrane component SMU_157 PF00132 Bacterial transferase hexapeptide (six repeats) SMU_1570 PF00528 Binding-protein-dependent transport system inner membrane component SMU_1571 PF00005 ABC transporter SMU_1571 PF08402 TOBE domain SMU_1572 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMU_1573 PF00438 S-adenosylmethionine synthetase, N-terminal domain SMU_1573 PF02772 S-adenosylmethionine synthetase, central domain SMU_1573 PF02773 S-adenosylmethionine synthetase, C-terminal domain SMU_1578 PF02237 Biotin protein ligase C terminal domain SMU_1578 PF03099 Biotin/lipoate A/B protein ligase family SMU_1578 PF08279 HTH domain SMU_158 PF01406 tRNA synthetases class I (C) catalytic domain SMU_158 PF09190 DALR domain SMU_1581 PF12169 DNA polymerase III subunits gamma and tau domain III SMU_1581 PF13177 DNA polymerase III, delta subunit SMU_1582c PF13185 GAF domain SMU_1584c PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family SMU_1585c PF00440 Bacterial regulatory proteins, tetR family SMU_1585c PF14278 SMU_1585c SMU_1586 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMU_1586 PF02824 TGS domain SMU_1586 PF03129 Anticodon binding domain SMU_1586 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMU_1588c PF00534 Glycosyl transferases group 1 SMU_1588c PF13439 Glycosyltransferase Family 4 SMU_1589c PF00534 Glycosyl transferases group 1 SMU_1589c PF13439 Glycosyltransferase Family 4 SMU_159 PF00636 Ribonuclease III domain SMU_1590 PF00128 Alpha amylase, catalytic domain SMU_1590 PF09154 Domain of unknown function (DUF1939) SMU_1591 PF00356 Bacterial regulatory proteins, lacI family SMU_1591 PF13377 Periplasmic binding protein-like domain SMU_1592 PF00557 Metallopeptidase family M24 SMU_1592 PF01321 Creatinase/Prolidase N-terminal domain SMU_1593c PF01864 SMU_1593c SMU_1595 PF00194 Eukaryotic-type carbonic anhydrase SMU_1596 PF02378 Phosphotransferase system, EIIC SMU_1598 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SMU_1599 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_1599 PF00874 PRD domain SMU_1599 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1599 PF05043 Mga helix-turn-helix domain SMU_1599 PF08279 HTH domain SMU_16 PF13520 Amino acid permease SMU_160 PF10026 SMU_160 SMU_1600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_1601 PF00232 Glycosyl hydrolase family 1 SMU_1602 PF00881 Nitroreductase family SMU_1603 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMU_1604c PF03551 Transcriptional regulator PadR-like family SMU_1604c PF10400 Virulence activator alpha C-term SMU_1605 PF07690 Major Facilitator Superfamily SMU_1606 PF01668 SmpB protein SMU_1607 PF00575 S1 RNA binding domain SMU_1607 PF00773 RNB domain SMU_1607 PF08206 Ribonuclease B OB domain SMU_1609c PF03840 Preprotein translocase SecG subunit SMU_161 PF07739 TipAS antibiotic-recognition domain SMU_161 PF13411 MerR HTH family regulatory protein SMU_1610 PF00471 Ribosomal protein L33 SMU_1611c PF07690 Major Facilitator Superfamily SMU_1612c PF13649 Methyltransferase domain SMU_1613c PF01121 Dephospho-CoA kinase SMU_1614 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMU_1614 PF06827 Zinc finger found in FPG and IleRS SMU_1614 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMU_1615c PF04978 Protein of unknown function (DUF664) SMU_1616c PF00293 NUDIX domain SMU_1617 PF01926 50S ribosome-binding GTPase SMU_1617 PF07650 KH domain SMU_1618 PF01219 Prokaryotic diacylglycerol kinase SMU_1619c PF02130 Uncharacterized protein family UPF0054 SMU_1620 PF02562 PhoH-like protein SMU_1621c PF06855 Protein of unknown function (DUF1250) SMU_1622 PF01625 Peptide methionine sulfoxide reductase SMU_1623c PF13509 S1 domain SMU_1624 PF01765 Ribosome recycling factor SMU_1625 PF00696 Amino acid kinase family SMU_1626 PF00687 Ribosomal protein L1p/L10e family SMU_1627 PF00298 Ribosomal protein L11, RNA binding domain SMU_1627 PF03946 Ribosomal protein L11, N-terminal domain SMU_1628 PF11877 SMU_1628 SMU_1629c PF01580 FtsK/SpoIIIE family SMU_1629c PF09397 Ftsk gamma domain SMU_162c PF14399 SMU_162c SMU_162c PF16169 SMU_162c SMU_1631 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMU_1632 PF01048 Phosphorylase superfamily SMU_1634c PF00293 NUDIX domain SMU_1635 PF00132 Bacterial transferase hexapeptide (six repeats) SMU_1635 PF12804 MobA-like NTP transferase domain SMU_1635 PF14602 Hexapeptide repeat of succinyl-transferase SMU_1636c PF04266 ASCH domain SMU_1639 PF01588 Putative tRNA binding domain SMU_1639 PF09334 tRNA synthetases class I (M) SMU_163c PF03551 Transcriptional regulator PadR-like family SMU_164 PF00588 SpoU rRNA Methylase family SMU_164 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMU_1641c PF05532 CsbD-like SMU_1642c PF04239 Protein of unknown function (DUF421) SMU_1643c PF11694 SMU_1643c SMU_1645 PF03848 Tellurite resistance protein TehB SMU_1645 PF09313 Domain of unknown function (DUF1971) SMU_1646c PF07853 SMU_1646c SMU_1646c PF13630 SMU_1646c SMU_1647c PF12840 Helix-turn-helix domain SMU_1649 PF03372 Endonuclease/Exonuclease/phosphatase family SMU_165 PF02645 Uncharacterised protein, DegV family COG1307 SMU_1650 PF00633 Helix-hairpin-helix motif SMU_1650 PF00730 HhH-GPD superfamily base excision DNA repair protein SMU_1651 PF03960 ArsC family SMU_1652 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMU_1652 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMU_1653 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMU_1653 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMU_1654c PF00583 Acetyltransferase (GNAT) family SMU_1656 PF00266 Aminotransferase class-V SMU_1657c PF00543 Nitrogen regulatory protein P-II SMU_1658 PF00909 Ammonium Transporter Family SMU_1659c PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMU_1660c PF06156 SMU_1660c SMU_1661c PF04468 SMU_1661c SMU_1662 PF13177 DNA polymerase III, delta subunit SMU_1663 PF02223 Thymidylate kinase SMU_1664c PF00571 CBS domain SMU_1665 PF00005 ABC transporter SMU_1666 PF00005 ABC transporter SMU_1666 PF12399 Branched-chain amino acid ATP-binding cassette transporter SMU_1667 PF02653 SMU_1667 SMU_1668 PF02653 SMU_1668 SMU_1669 PF13458 Periplasmic binding protein SMU_1670c PF09902 SMU_1670c SMU_1671c PF06133 Protein of unknown function (DUF964) SMU_1672 PF00574 Clp protease SMU_1673 PF14681 Uracil phosphoribosyltransferase SMU_1674 PF00155 Aminotransferase class I and II SMU_1675 PF01053 Cys/Met metabolism PLP-dependent enzyme SMU_1676c PF01943 SMU_1676c SMU_1676c PF14667 Polysaccharide biosynthesis C-terminal domain SMU_1677 PF02875 Mur ligase family, glutamate ligase domain SMU_1677 PF08245 Mur ligase middle domain SMU_1678 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal SMU_1679c PF01161 Phosphatidylethanolamine-binding protein SMU_168 PF01381 Helix-turn-helix SMU_1681c PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMU_1682c PF01965 DJ-1/PfpI family SMU_1683c PF08279 HTH domain SMU_1683c PF13280 SMU_1683c SMU_1685c PF08820 SMU_1685c SMU_1687 PF01368 DHH family SMU_1687 PF02833 DHHA2 domain SMU_1688 PF04914 DltD C-terminal region SMU_1688 PF04915 DltD N-terminal region SMU_1688 PF04918 DltD central region SMU_1689 PF00550 Phosphopantetheine attachment site SMU_169 PF00572 Ribosomal protein L13 SMU_1691 PF00501 AMP-binding enzyme SMU_1691 PF13193 AMP-binding enzyme C-terminal domain SMU_1692 PF04055 Radical SAM superfamily SMU_1692 PF13353 4Fe-4S single cluster domain SMU_1693 PF00571 CBS domain SMU_1693 PF01595 SMU_1693 SMU_1693 PF03471 Transporter associated domain SMU_1694c PF01594 SMU_1694c SMU_1695 PF00005 ABC transporter SMU_1697c PF06962 Putative rRNA methylase SMU_1699c PF04055 Radical SAM superfamily SMU_1699c PF16199 SMU_1699c SMU_170 PF00380 Ribosomal protein S9/S16 SMU_1700c PF04172 SMU_1700c SMU_1701c PF03788 SMU_1701c SMU_1702c PF01569 PAP2 superfamily SMU_1703c PF12822 Protein of unknown function (DUF3816) SMU_1704 PF03551 Transcriptional regulator PadR-like family SMU_1705 PF08006 SMU_1705 SMU_1706 PF13349 SMU_1706 SMU_1707c PF00588 SpoU rRNA Methylase family SMU_1708 PF02080 TrkA-C domain SMU_1708 PF02254 TrkA-N domain SMU_1709 PF02386 Cation transport protein SMU_1710c PF01809 SMU_1710c SMU_1711 PF00849 RNA pseudouridylate synthase SMU_1711 PF01479 S4 domain SMU_1712c PF04079 Putative transcriptional regulators (Ypuh-like) SMU_1713c PF02616 ScpA/B protein SMU_1715c PF00571 CBS domain SMU_1716c PF12850 Calcineurin-like phosphoesterase superfamily domain SMU_1717c PF01725 Ham1 family SMU_1718 PF01177 Asp/Glu/Hydantoin racemase SMU_1719c PF03672 SMU_1719c SMU_172 PF04014 Antidote-toxin recognition MazE SMU_1721c PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SMU_1721c PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMU_1722c PF01027 Inhibitor of apoptosis-promoting Bax1 SMU_1723c PF01966 HD domain SMU_1724c PF00588 SpoU rRNA Methylase family SMU_1724c PF08032 RNA 2'-O ribose methyltransferase substrate binding SMU_1725 PF00708 Acylphosphatase SMU_1727 PF02096 60Kd inner membrane protein SMU_1728 PF01272 Transcription elongation factor, GreA/GreB, C-term SMU_1728 PF03449 Transcription elongation factor, N-terminal SMU_1729c PF02618 YceG-like family SMU_173 PF02452 PemK-like protein SMU_1730c PF13673 Acetyltransferase (GNAT) domain SMU_1731 PF01225 Mur ligase family, catalytic domain SMU_1731 PF02875 Mur ligase family, glutamate ligase domain SMU_1731 PF08245 Mur ligase middle domain SMU_1733c PF00176 SNF2 family N-terminal domain SMU_1733c PF00271 Helicase conserved C-terminal domain SMU_1733c PF08455 SMU_1733c SMU_1734 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SMU_1735 PF01039 Carboxyl transferase domain SMU_1736 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SMU_1736 PF02785 Biotin carboxylase C-terminal domain SMU_1736 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMU_1737 PF07977 FabA-like domain SMU_1738 PF00364 Biotin-requiring enzyme SMU_1739 PF00109 Beta-ketoacyl synthase, N-terminal domain SMU_1739 PF02801 Beta-ketoacyl synthase, C-terminal domain SMU_1740 PF13561 Enoyl-(Acyl carrier protein) reductase SMU_1741 PF00698 Acyl transferase domain SMU_1742c PF03060 Nitronate monooxygenase SMU_1743 PF00550 Phosphopantetheine attachment site SMU_1744 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMU_1744 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMU_1745c PF01047 MarR family SMU_1746c PF00378 Enoyl-CoA hydratase/isomerase family SMU_1747c PF13419 Haloacid dehalogenase-like hydrolase SMU_1748 PF00696 Amino acid kinase family SMU_1748 PF13840 ACT domain SMU_174c PF01909 Nucleotidyltransferase domain SMU_174c PF13228 SMU_174c SMU_1753c PF09827 CRISPR associated protein Cas2 SMU_1754c PF01867 CRISPR associated protein Cas1 SMU_1755c PF01867 CRISPR associated protein Cas1 SMU_1757c PF01867 CRISPR associated protein Cas1 SMU_1758c PF01930 Domain of unknown function DUF83 SMU_1760c PF05107 SMU_1760c SMU_1761c PF09709 SMU_1761c SMU_1762c PF09709 SMU_1762c SMU_1763c PF09704 CRISPR-associated protein (Cas_Cas5) SMU_1764c PF00271 Helicase conserved C-terminal domain SMU_1764c PF01966 HD domain SMU_1764c PF04851 Type III restriction enzyme, res subunit SMU_1765c PF13280 SMU_1765c SMU_1770 PF00133 tRNA synthetases class I (I, L, M and V) SMU_1770 PF08264 Anticodon-binding domain of tRNA SMU_1770 PF10458 Valyl tRNA synthetase tRNA binding arm SMU_1774c PF08930 Domain of unknown function (DUF1912) SMU_1776c PF04221 RelB antitoxin SMU_1777 PF07972 NrdI Flavodoxin like SMU_1779c PF01938 TRAM domain SMU_1779c PF05958 tRNA (Uracil-5-)-methyltransferase SMU_178 PF06028 Alpha/beta hydrolase of unknown function (DUF915) SMU_1780 PF02631 RecX family SMU_1781 PF04167 Protein of unknown function (DUF402) SMU_1782 PF06124 Staphylococcal protein of unknown function (DUF960) SMU_1783 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMU_1783 PF03129 Anticodon binding domain SMU_1783 PF04073 Aminoacyl-tRNA editing domain SMU_1784c PF02163 Peptidase family M50 SMU_1785 PF01148 Cytidylyltransferase family SMU_1786 PF01255 Putative undecaprenyl diphosphate synthase SMU_1787c PF02699 Preprotein translocase subunit SMU_1788c PF13728 F plasmid transfer operon protein SMU_1789c PF01709 Transcriptional regulator SMU_179 PF03358 NADPH-dependent FMN reductase SMU_1790c PF07739 TipAS antibiotic-recognition domain SMU_1790c PF13411 MerR HTH family regulatory protein SMU_1791c PF05636 HIGH Nucleotidyl Transferase SMU_1795c PF13649 Methyltransferase domain SMU_1797c PF02410 Oligomerisation domain SMU_1798c PF01966 HD domain SMU_1799 PF01467 Cytidylyltransferase SMU_180 PF00890 FAD binding domain SMU_180 PF03358 NADPH-dependent FMN reductase SMU_180 PF04205 FMN-binding domain SMU_1800c PF01985 CRS1 / YhbY (CRM) domain SMU_1801c PF01926 50S ribosome-binding GTPase SMU_1802c PF13242 HAD-hyrolase-like SMU_1803c PF14014 SMU_1803c SMU_1805 PF00440 Bacterial regulatory proteins, tetR family SMU_1806 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SMU_1807c PF00892 EamA-like transporter family SMU_1809 PF12730 SMU_1809 SMU_181 PF00288 GHMP kinases N terminal domain SMU_181 PF08544 GHMP kinases C terminal SMU_1810 PF12730 SMU_1810 SMU_1811 PF00005 ABC transporter SMU_1812 PF01610 SMU_1812 SMU_1812 PF13542 SMU_1812 SMU_1812 PF14690 SMU_1812 SMU_1814 PF00512 His Kinase A (phospho-acceptor) domain SMU_1814 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_1815 PF00072 Response regulator receiver domain SMU_1815 PF00486 Transcriptional regulatory protein, C terminal SMU_1819 PF02637 GatB domain SMU_1819 PF02934 GatB/GatE catalytic domain SMU_182 PF00005 ABC transporter SMU_1820c PF01425 Amidase SMU_1821c PF02686 Glu-tRNAGln amidotransferase C subunit SMU_1822 PF00152 tRNA synthetases class II (D, K and N) SMU_1822 PF01336 OB-fold nucleic acid binding domain SMU_1822 PF02938 GAD domain SMU_1823 PF00857 Isochorismatase family SMU_1824c PF06018 CodY GAF-like domain SMU_1824c PF08222 CodY helix-turn-helix domain SMU_1826 PF00155 Aminotransferase class I and II SMU_1827 PF02632 BioY family SMU_1828 PF00582 Universal stress protein family SMU_183 PF00950 SMU_183 SMU_1830c PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SMU_1830c PF08282 haloacid dehalogenase-like hydrolase SMU_1831 PF00710 Asparaginase SMU_1833 PF00270 DEAD/DEAH box helicase SMU_1833 PF00271 Helicase conserved C-terminal domain SMU_1833 PF17191 SMU_1833 SMU_1834 PF00842 Alanine racemase, C-terminal domain SMU_1834 PF01168 Alanine racemase, N-terminal domain SMU_1835 PF01648 4'-phosphopantetheinyl transferase superfamily SMU_1836 PF00793 DAHP synthetase I family SMU_1837 PF00793 DAHP synthetase I family SMU_1838 PF01043 SecA preprotein cross-linking domain SMU_1838 PF02810 SEC-C motif SMU_1838 PF07516 SecA Wing and Scaffold domain SMU_1838 PF07517 SecA DEAD-like domain SMU_1839 PF01238 Phosphomannose isomerase type I SMU_184 PF01297 Periplasmic solute binding protein family SMU_1840 PF00480 ROK family SMU_1841 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_1841 PF00367 phosphotransferase system, EIIB SMU_1841 PF02378 Phosphotransferase system, EIIC SMU_1843 PF00251 Glycosyl hydrolases family 32 N-terminal domain SMU_1843 PF08244 Glycosyl hydrolases family 32 C terminal SMU_1844 PF00356 Bacterial regulatory proteins, lacI family SMU_1844 PF13377 Periplasmic binding protein-like domain SMU_1845 PF01029 NusB family SMU_1846c PF03780 SMU_1846c SMU_1847 PF01132 Elongation factor P (EF-P) OB domain SMU_1847 PF08207 Elongation factor P (EF-P) KOW-like domain SMU_1847 PF09285 Elongation factor P, C-terminal SMU_1848 PF00520 Ion transport protein SMU_1849 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMU_1850 PF00557 Metallopeptidase family M24 SMU_1850 PF01321 Creatinase/Prolidase N-terminal domain SMU_1851 PF00005 ABC transporter SMU_1852 PF01544 CorA-like Mg2+ transporter protein SMU_1853 PF06570 SMU_1853 SMU_1854 PF04397 LytTr DNA-binding domain SMU_1855 PF09922 Cell wall-active antibiotics response protein (DUF2154) SMU_1856c PF05857 SMU_1856c SMU_1858 PF01084 Ribosomal protein S18 SMU_1859 PF00436 Single-strand binding protein family SMU_186 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMU_186 PF02742 Iron dependent repressor, metal binding and dimerisation domain SMU_186 PF04023 FeoA domain SMU_1860 PF01250 Ribosomal protein S6 SMU_1865 PF00633 Helix-hairpin-helix motif SMU_1865 PF00730 HhH-GPD superfamily base excision DNA repair protein SMU_1865 PF14815 NUDIX domain SMU_1867c PF00107 Zinc-binding dehydrogenase SMU_1867c PF08240 Alcohol dehydrogenase GroES-like domain SMU_1869 PF00085 Thioredoxin SMU_1870 PF00488 MutS domain V SMU_1870 PF01713 Smr domain SMU_1871c PF02674 SMU_1871c SMU_1873 PF01351 Ribonuclease HII SMU_1873 PF11858 Domain of unknown function (DUF3378) SMU_1874 PF00717 Peptidase S24-like SMU_1875 PF13538 UvrD-like helicase C-terminal domain SMU_1875 PF13604 AAA domain SMU_1875 PF14490 Helix-hairpin-helix containing domain SMU_1877 PF03610 PTS system fructose IIA component SMU_1877 PF03830 PTS system sorbose subfamily IIB component SMU_1878 PF03609 SMU_1878 SMU_1879 PF03613 SMU_1879 SMU_187c PF01207 Dihydrouridine synthase (Dus) SMU_1881c PF00005 ABC transporter SMU_1881c PF00664 ABC transporter transmembrane region SMU_1881c PF03412 Peptidase C39 family SMU_1883 PF06115 SMU_1883 SMU_1884c PF01757 SMU_1884c SMU_1886 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMU_1886 PF02403 Seryl-tRNA synthetase N-terminal domain SMU_1889c PF10439 SMU_1889c SMU_188c PF01430 Hsp33 protein SMU_1893c PF00665 Integrase core domain SMU_1893c PF13276 SMU_1893c SMU_1894c PF01527 Transposase SMU_1895c PF03047 SMU_1895c SMU_1896c PF10439 SMU_1896c SMU_1897 PF03412 Peptidase C39 family SMU_1898 PF00005 ABC transporter SMU_1898 PF00664 ABC transporter transmembrane region SMU_1900 PF13437 HlyD family secretion protein SMU_1905c PF10439 SMU_1905c SMU_1906c PF10439 SMU_1906c SMU_1914c PF10439 SMU_1914c SMU_1915 PF03047 SMU_1915 SMU_1916 PF14501 GHKL domain SMU_1917 PF00072 Response regulator receiver domain SMU_1917 PF04397 LytTr DNA-binding domain SMU_1918 PF09335 SMU_1918 SMU_191c PF00589 Phage integrase family SMU_1920 PF01926 50S ribosome-binding GTPase SMU_1920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SMU_1921 PF01695 IstB-like ATP binding protein SMU_1921 PF07319 Primosomal protein DnaI N-terminus SMU_1922 PF07261 Replication initiation and membrane attachment SMU_1923c PF03477 ATP cone domain SMU_1924 PF00072 Response regulator receiver domain SMU_1924 PF00486 Transcriptional regulatory protein, C terminal SMU_1925c PF02620 SMU_1925c SMU_1926 PF00440 Bacterial regulatory proteins, tetR family SMU_1926 PF14278 SMU_1926 SMU_1927 PF00005 ABC transporter SMU_1928 PF02687 SMU_1928 SMU_1928 PF12704 MacB-like periplasmic core domain SMU_1929 PF01435 Peptidase family M48 SMU_1930 PF04011 LemA family SMU_1931 PF02527 rRNA small subunit methyltransferase G SMU_1933c PF02361 Cobalt transport protein SMU_1934c PF00005 ABC transporter SMU_1934c PF12558 SMU_1934c SMU_1935c PF07155 ECF-type riboflavin transporter, S component SMU_1936c PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase SMU_1937 PF00795 Carbon-nitrogen hydrolase SMU_1938c PF00528 Binding-protein-dependent transport system inner membrane component SMU_1939c PF00005 ABC transporter SMU_1939c PF09383 NIL domain SMU_193c PF11372 SMU_193c SMU_1940c PF01546 Peptidase family M20/M25/M40 SMU_1940c PF07687 Peptidase dimerisation domain SMU_1941 PF03180 NLPA lipoprotein SMU_1942c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_1943 PF00133 tRNA synthetases class I (I, L, M and V) SMU_1943 PF08264 Anticodon-binding domain of tRNA SMU_1943 PF09334 tRNA synthetases class I (M) SMU_1943 PF13603 Leucyl-tRNA synthetase, Domain 2 SMU_1945 PF09359 VTC domain SMU_1946 PF16316 SMU_1946 SMU_1947 PF00467 KOW motif SMU_1947 PF02357 Transcription termination factor nusG SMU_1948 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SMU_1949 PF00905 Penicillin binding protein transpeptidase domain SMU_1949 PF00912 Transglycosylase SMU_194c PF12961 Domain of Unknown Function with PDB structure (DUF3850) SMU_1950 PF00849 RNA pseudouridylate synthase SMU_1954 PF00118 TCP-1/cpn60 chaperonin family SMU_1955 PF00166 Chaperonin 10 Kd subunit SMU_1957 PF03613 SMU_1957 SMU_1958c PF03609 SMU_1958c SMU_1960c PF03830 PTS system sorbose subfamily IIB component SMU_1961c PF03610 PTS system fructose IIA component SMU_1963c PF01547 Bacterial extracellular solute-binding protein SMU_1964c PF00072 Response regulator receiver domain SMU_1964c PF00196 Bacterial regulatory proteins, luxR family SMU_1965c PF07730 Histidine kinase SMU_1966c PF13407 Periplasmic binding protein domain SMU_1967 PF00436 Single-strand binding protein family SMU_1968c PF00581 Rhodanese-like domain SMU_1969c PF01047 MarR family SMU_196c PF05257 CHAP domain SMU_1970c PF01588 Putative tRNA binding domain SMU_1970c PF14794 Domain of unknown function (DUF4479) SMU_1971c PF00085 Thioredoxin SMU_1972c PF15513 Domain of unknown function (DUF4651) SMU_1973 PF05343 M42 glutamyl aminopeptidase SMU_1974 PF03807 NADP oxidoreductase coenzyme F420-dependent SMU_1974 PF14748 Pyrroline-5-carboxylate reductase dimerisation SMU_1975c PF02517 CAAX protease self-immunity SMU_1977c PF01381 Helix-turn-helix SMU_1978 PF00871 Acetokinase family SMU_1979c PF02384 N-6 DNA Methylase SMU_1981c PF15980 SMU_1981c SMU_1982c PF11773 SMU_1982c SMU_1984 PF13633 Prokaryotic N-terminal methylation site SMU_1985 PF00482 Type II secretion system (T2SS), protein F SMU_1987 PF00437 Type II/IV secretion system protein SMU_1988c PF06279 SMU_1988c SMU_1989 PF00623 RNA polymerase Rpb1, domain 2 SMU_1989 PF04983 RNA polymerase Rpb1, domain 3 SMU_1989 PF04997 RNA polymerase Rpb1, domain 1 SMU_1989 PF04998 RNA polymerase Rpb1, domain 5 SMU_1989 PF05000 RNA polymerase Rpb1, domain 4 SMU_198c PF12846 AAA-like domain SMU_1990 PF00562 RNA polymerase Rpb2, domain 6 SMU_1990 PF04560 RNA polymerase Rpb2, domain 7 SMU_1990 PF04561 RNA polymerase Rpb2, domain 2 SMU_1990 PF04563 RNA polymerase beta subunit SMU_1990 PF04565 RNA polymerase Rpb2, domain 3 SMU_1990 PF10385 RNA polymerase beta subunit external 1 domain SMU_1991 PF00905 Penicillin binding protein transpeptidase domain SMU_1991 PF00912 Transglycosylase SMU_1992 PF00579 tRNA synthetases class I (W and Y) SMU_1992 PF01479 S4 domain SMU_1993 PF00950 SMU_1993 SMU_1994 PF00005 ABC transporter SMU_1995c PF01047 MarR family SMU_1996 PF00288 GHMP kinases N terminal domain SMU_1996 PF08544 GHMP kinases C terminal SMU_1999c PF04107 Glutamate-cysteine ligase family 2(GCS2) SMU_199c PF12648 SMU_199c SMU_20 PF04085 rod shape-determining protein MreC SMU_2000 PF01196 Ribosomal protein L17 SMU_2001 PF01000 RNA polymerase Rpb3/RpoA insert domain SMU_2001 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SMU_2001 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SMU_2002 PF00411 Ribosomal protein S11 SMU_2003 PF00416 Ribosomal protein S13/S18 SMU_2003a PF00444 Ribosomal protein L36 SMU_2004 PF01176 Translation initiation factor 1A / IF-1 SMU_2005 PF00406 Adenylate kinase SMU_2006 PF00344 SecY translocase SMU_2007 PF00828 Ribosomal protein L18e/L15 SMU_2008 PF00327 Ribosomal protein L30p/L7e SMU_2009 PF00333 Ribosomal protein S5, N-terminal domain SMU_2009 PF03719 Ribosomal protein S5, C-terminal domain SMU_2010 PF00861 Ribosomal L18p/L5e family SMU_2011 PF00347 Ribosomal protein L6 SMU_2012 PF00410 Ribosomal protein S8 SMU_2014 PF00253 Ribosomal protein S14p/S29e SMU_2015 PF00281 Ribosomal protein L5 SMU_2015 PF00673 ribosomal L5P family C-terminus SMU_2016 PF00467 KOW motif SMU_2016 PF17136 SMU_2016 SMU_2017 PF00238 Ribosomal protein L14p/L23e SMU_2018 PF00366 Ribosomal protein S17 SMU_2019 PF00831 Ribosomal L29 protein SMU_201c PF12642 Conjugative transposon protein TcpC SMU_2020 PF00252 Ribosomal protein L16p/L10e SMU_2021 PF00189 Ribosomal protein S3, C-terminal domain SMU_2021 PF07650 KH domain SMU_2022 PF00237 Ribosomal protein L22p/L17e SMU_2023c PF00203 Ribosomal protein S19 SMU_2024c PF00573 Ribosomal protein L4/L1 family SMU_2025 PF00297 Ribosomal protein L3 SMU_2026c PF00338 Ribosomal protein S10p/S20e SMU_2027 PF00717 Peptidase S24-like SMU_2027 PF01381 Helix-turn-helix SMU_2028 PF02435 Levansucrase/Invertase SMU_2029 PF00004 ATPase family associated with various cellular activities (AAA) SMU_2029 PF02861 Clp amino terminal domain SMU_2029 PF07724 AAA domain (Cdc48 subfamily) SMU_2029 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_2030 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) SMU_2031 PF00889 Elongation factor TS SMU_2032 PF00318 Ribosomal protein S2 SMU_2035 PF02016 LD-carboxypeptidase SMU_2036 PF01431 Peptidase family M13 SMU_2036 PF05649 Peptidase family M13 SMU_2037 PF00128 Alpha amylase, catalytic domain SMU_2037 PF16657 SMU_2037 SMU_2038 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_2038 PF00367 phosphotransferase system, EIIB SMU_2038 PF02378 Phosphotransferase system, EIIC SMU_2040 PF00392 Bacterial regulatory proteins, gntR family SMU_2040 PF07702 UTRA domain SMU_2042 PF13199 Glycosyl hydrolase family 66 SMU_2043c PF02580 D-Tyr-tRNA(Tyr) deacylase SMU_2044 PF02824 TGS domain SMU_2044 PF04607 Region found in RelA / SpoT proteins SMU_2044 PF13291 ACT domain SMU_2044 PF13328 HD domain SMU_2046c PF03372 Endonuclease/Exonuclease/phosphatase family SMU_2047 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_2047 PF00367 phosphotransferase system, EIIB SMU_2047 PF02378 Phosphotransferase system, EIIC SMU_2049c PF04452 RNA methyltransferase SMU_2050c PF06325 Ribosomal protein L11 methyltransferase (PrmA) SMU_2054c PF11217 Protein of unknown function (DUF3013) SMU_2055 PF13673 Acetyltransferase (GNAT) domain SMU_2056 PF00004 ATPase family associated with various cellular activities (AAA) SMU_2056 PF12002 MgsA AAA+ ATPase C terminal SMU_2056 PF16193 SMU_2056 SMU_2057c PF00122 E1-E2 ATPase SMU_2057c PF00702 haloacid dehalogenase-like hydrolase SMU_2058 PF00376 MerR family regulatory protein SMU_2059c PF03601 SMU_2059c SMU_2060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_2060 PF03466 LysR substrate binding domain SMU_2061 PF16305 SMU_2061 SMU_2063 PF00762 Ferrochelatase SMU_2064c PF09586 SMU_2064c SMU_2065 PF01370 NAD dependent epimerase/dehydratase family SMU_2066c PF09586 SMU_2066c SMU_2067 PF00535 Glycosyl transferase family 2 SMU_2069 PF02535 SMU_2069 SMU_2070 PF03883 SMU_2070 SMU_2071 PF13353 4Fe-4S single cluster domain SMU_2072c PF13302 Acetyltransferase (GNAT) domain SMU_2074 PF03477 ATP cone domain SMU_2074 PF13597 Anaerobic ribonucleoside-triphosphate reductase SMU_2077c PF06949 SMU_2077c SMU_2078c PF03652 Uncharacterised protein family (UPF0081) SMU_2079c PF06135 SMU_2079c SMU_207c PF02486 SMU_207c SMU_2080 PF04397 LytTr DNA-binding domain SMU_2081 PF11457 SMU_2081 SMU_2084c PF00462 Glutaredoxin SMU_2084c PF03960 ArsC family SMU_2085 PF00154 recA bacterial DNA recombination protein SMU_2086 PF00994 Probable molybdopterin binding domain SMU_2086 PF02464 Competence-damaged protein SMU_2087 PF03352 Methyladenine glycosylase SMU_2088 PF01330 RuvA N terminal domain SMU_2088 PF07499 RuvA, C-terminal domain SMU_2088 PF14520 Helix-hairpin-helix domain SMU_2089 PF01119 DNA mismatch repair protein, C-terminal domain SMU_2089 PF08676 MutL C terminal dimerisation domain SMU_2089 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_208c PF01580 FtsK/SpoIIIE family SMU_2091c PF00488 MutS domain V SMU_2091c PF01624 MutS domain I SMU_2091c PF05188 MutS domain II SMU_2091c PF05190 MutS family domain IV SMU_2091c PF05192 MutS domain III SMU_2092c PF06133 Protein of unknown function (DUF964) SMU_2093 PF01316 Arginine repressor, DNA binding domain SMU_2093 PF02863 Arginine repressor, C-terminal domain SMU_2094c PF00027 Cyclic nucleotide-binding domain SMU_2097 PF02863 Arginine repressor, C-terminal domain SMU_2098 PF00750 tRNA synthetases class I (R) SMU_2098 PF03485 Arginyl tRNA synthetase N terminal domain SMU_2098 PF05746 DALR anticodon binding domain SMU_2099c PF02588 SMU_2099c SMU_2099c PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMU_209c PF06125 Bacterial protein of unknown function (DUF961) SMU_21 PF04093 SMU_21 SMU_2100c PF02588 SMU_2100c SMU_2100c PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMU_2101 PF00152 tRNA synthetases class II (D, K and N) SMU_2101 PF01336 OB-fold nucleic acid binding domain SMU_2101 PF02938 GAD domain SMU_2102 PF03129 Anticodon binding domain SMU_2102 PF13393 Histidyl-tRNA synthetase SMU_2104 PF13520 Amino acid permease SMU_2104a PF01783 Ribosomal L32p protein family SMU_2108c PF01022 Bacterial regulatory protein, arsR family SMU_2109 PF07690 Major Facilitator Superfamily SMU_2112 PF01473 Putative cell wall binding repeat SMU_2113c PF00300 Histidine phosphatase superfamily (branch 1) SMU_2114c PF13411 MerR HTH family regulatory protein SMU_2115 PF00106 short chain dehydrogenase SMU_2116 PF00005 ABC transporter SMU_2116 PF00571 CBS domain SMU_2117 PF00528 Binding-protein-dependent transport system inner membrane component SMU_2118 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SMU_2119 PF00528 Binding-protein-dependent transport system inner membrane component SMU_2120c PF02245 Methylpurine-DNA glycosylase (MPG) SMU_2121c PF03795 YCII-related domain SMU_2125 PF01638 HxlR-like helix-turn-helix SMU_2126c PF01048 Phosphorylase superfamily SMU_2127 PF00171 Aldehyde dehydrogenase family SMU_2128 PF00920 Dehydratase family SMU_2129c PF01883 Domain of unknown function DUF59 SMU_2130 PF03595 Voltage-dependent anion channel SMU_2134 PF00440 Bacterial regulatory proteins, tetR family SMU_2135c PF00163 Ribosomal protein S4/S9 N-terminal domain SMU_2135c PF01479 S4 domain SMU_2137c PF06257 Protein of unknown function (DUF1021) SMU_2138 PF00772 DnaB-like helicase N terminal domain SMU_2138 PF03796 DnaB-like helicase C terminal domain SMU_2139c PF01281 Ribosomal protein L9, N-terminal domain SMU_2139c PF03948 Ribosomal protein L9, C-terminal domain SMU_2142 PF02502 Ribose/Galactose Isomerase SMU_2143c PF03054 tRNA methyl transferase SMU_2146c PF01464 Transglycosylase SLT domain SMU_2147c PF01476 LysM domain SMU_2148c PF02361 Cobalt transport protein SMU_2149c PF00005 ABC transporter SMU_2150c PF00005 ABC transporter SMU_2151 PF01066 CDP-alcohol phosphatidyltransferase SMU_2152c PF13413 Helix-turn-helix domain SMU_2153c PF00675 Insulinase (Peptidase family M16) SMU_2153c PF05193 Peptidase M16 inactive domain SMU_2154c PF05193 Peptidase M16 inactive domain SMU_2155 PF13275 S4 domain SMU_2156 PF02463 RecF/RecN/SMC N terminal domain SMU_2157 PF00478 IMP dehydrogenase / GMP reductase domain SMU_2157 PF00571 CBS domain SMU_2158c PF00579 tRNA synthetases class I (W and Y) SMU_2159 PF00005 ABC transporter SMU_2159 PF12848 ABC transporter SMU_2160 PF09586 SMU_2160 SMU_2161c PF06912 SMU_2161c SMU_2162c PF02590 Predicted SPOUT methyltransferase SMU_2164 PF13180 PDZ domain SMU_2164 PF13365 Trypsin-like peptidase domain SMU_2165 PF02195 ParB-like nuclease domain SMU_2166 PF00276 Ribosomal protein L23 SMU_2167 PF00181 Ribosomal Proteins L2, RNA binding domain SMU_2167 PF03947 Ribosomal Proteins L2, C-terminal domain SMU_218 PF01381 Helix-turn-helix SMU_219 PF06114 Domain of unknown function (DUF955) SMU_22 PF05257 CHAP domain SMU_221c PF00589 Phage integrase family SMU_223c PF05595 SMU_223c SMU_224c PF05595 SMU_224c SMU_224c PF08282 haloacid dehalogenase-like hydrolase SMU_226c PF13612 SMU_226c SMU_227c PF04191 Phospholipid methyltransferase SMU_228 PF03780 SMU_228 SMU_229 PF02734 DAK2 domain SMU_229 PF13684 Dihydroxyacetone kinase family SMU_23 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMU_23 PF14572 Phosphoribosyl synthetase-associated domain SMU_231 PF00205 Thiamine pyrophosphate enzyme, central domain SMU_231 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMU_231 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMU_232 PF10369 Small subunit of acetolactate synthase SMU_232 PF13710 ACT domain SMU_233 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SMU_233 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain SMU_234 PF00291 Pyridoxal-phosphate dependent enzyme SMU_234 PF00585 C-terminal regulatory domain of Threonine dehydratase SMU_235 PF01145 SPFH domain / Band 7 family SMU_236c PF00440 Bacterial regulatory proteins, tetR family SMU_237c PF12698 ABC-2 family transporter protein SMU_238c PF00005 ABC transporter SMU_239c PF04892 SMU_239c SMU_24 PF00155 Aminotransferase class I and II SMU_241c PF00005 ABC transporter SMU_242c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_242c PF00528 Binding-protein-dependent transport system inner membrane component SMU_243 PF09972 SMU_243 SMU_244 PF02673 SMU_244 SMU_245 PF05389 Negative regulator of genetic competence (MecA) SMU_246 PF00953 Glycosyl transferase family 4 SMU_247 PF00005 ABC transporter SMU_248 PF01458 Uncharacterized protein family (UPF0051) SMU_249 PF00266 Aminotransferase class-V SMU_25 PF02565 Recombination protein O C terminal SMU_25 PF11967 Recombination protein O N terminal SMU_250 PF01592 NifU-like N terminal domain SMU_251 PF01458 Uncharacterized protein family (UPF0051) SMU_253 PF00768 D-alanyl-D-alanine carboxypeptidase SMU_253 PF07943 Penicillin-binding protein 5, C-terminal domain SMU_255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMU_256 PF00528 Binding-protein-dependent transport system inner membrane component SMU_257 PF00528 Binding-protein-dependent transport system inner membrane component SMU_257 PF12911 SMU_257 SMU_258 PF00005 ABC transporter SMU_258 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMU_259 PF00005 ABC transporter SMU_259 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMU_26 PF02504 Fatty acid synthesis protein SMU_260 PF00881 Nitroreductase family SMU_261c PF00196 Bacterial regulatory proteins, luxR family SMU_262 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMU_262 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMU_263 PF13520 Amino acid permease SMU_264 PF04371 Porphyromonas-type peptidyl-arginine deiminase SMU_265 PF00696 Amino acid kinase family SMU_267c PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMU_267c PF04262 Glutamate-cysteine ligase SMU_268 PF00709 Adenylosuccinate synthetase SMU_27 PF00550 Phosphopantetheine attachment site SMU_270 PF03611 SMU_270 SMU_271 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_272 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_273 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMU_274 PF01261 Xylose isomerase-like TIM barrel SMU_275 PF00596 Class II Aldolase and Adducin N-terminal domain SMU_28 PF00005 ABC transporter SMU_283 PF10439 SMU_283 SMU_286 PF00005 ABC transporter SMU_286 PF00664 ABC transporter transmembrane region SMU_286 PF03412 Peptidase C39 family SMU_287 PF13437 HlyD family secretion protein SMU_289 PF00874 PRD domain SMU_289 PF08279 HTH domain SMU_29 PF01259 SAICAR synthetase SMU_290 PF13483 Beta-lactamase superfamily domain SMU_291 PF00456 Transketolase, thiamine diphosphate binding domain SMU_291 PF02779 Transketolase, pyrimidine binding domain SMU_291 PF02780 Transketolase, C-terminal domain SMU_292 PF12625 SMU_292 SMU_292 PF12833 Helix-turn-helix domain SMU_293 PF13787 SMU_293 SMU_294 PF04397 LytTr DNA-binding domain SMU_296 PF02558 Ketopantoate reductase PanE/ApbA SMU_297 PF00476 DNA polymerase family A SMU_297 PF01367 5'-3' exonuclease, C-terminal SAM fold SMU_297 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMU_298 PF13380 CoA binding domain SMU_299c PF03047 SMU_299c SMU_30 PF02769 AIR synthase related protein, C-terminal domain SMU_30 PF13507 CobB/CobQ-like glutamine amidotransferase domain SMU_300 PF01702 Queuine tRNA-ribosyltransferase SMU_301 PF06042 Bacterial protein of unknown function (DUF925) SMU_302 PF02698 DUF218 domain SMU_303 PF12706 Beta-lactamase superfamily domain SMU_304 PF14437 SMU_304 SMU_307 PF00342 Phosphoglucose isomerase SMU_308 PF00106 short chain dehydrogenase SMU_309 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_309 PF00874 PRD domain SMU_309 PF05043 Mga helix-turn-helix domain SMU_31 PF08713 DNA alkylation repair enzyme SMU_310 PF06923 SMU_310 SMU_311 PF03608 SMU_311 SMU_312 PF03612 SMU_312 SMU_312 PF07663 SMU_312 SMU_313 PF03829 PTS system glucitol/sorbitol-specific IIA component SMU_317 PF00132 Bacterial transferase hexapeptide (six repeats) SMU_317 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SMU_317 PF14602 Hexapeptide repeat of succinyl-transferase SMU_318 PF01546 Peptidase family M20/M25/M40 SMU_318 PF07687 Peptidase dimerisation domain SMU_32 PF00156 Phosphoribosyl transferase domain SMU_32 PF13537 Glutamine amidotransferase domain SMU_320 PF01812 5-formyltetrahydrofolate cyclo-ligase family SMU_321 PF01694 Rhomboid family SMU_322c PF00483 Nucleotidyl transferase SMU_323 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMU_323 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMU_325 PF00692 dUTPase SMU_326 PF00857 Isochorismatase family SMU_327 PF13481 AAA domain SMU_327 PF13541 Subunit ChlI of Mg-chelatase SMU_328 PF00484 Carbonic anhydrase SMU_329 PF01987 Mitochondrial biogenesis AIM24 SMU_330 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMU_331 PF02829 3H domain SMU_331 PF08279 HTH domain SMU_334 PF00764 Arginosuccinate synthase SMU_335 PF00206 Lyase SMU_335 PF14698 Argininosuccinate lyase C-terminal SMU_336 PF00825 Ribonuclease P SMU_337 PF02096 60Kd inner membrane protein SMU_338 PF01424 R3H domain SMU_338 PF13083 KH domain SMU_338 PF14804 Jag N-terminus SMU_339 PF06197 SMU_339 SMU_34 PF00586 AIR synthase related protein, N-terminal domain SMU_34 PF02769 AIR synthase related protein, C-terminal domain SMU_340 PF00468 Ribosomal protein L34 SMU_341 PF01026 TatD related DNase SMU_342 PF13331 SMU_342 SMU_342 PF13662 Toprim domain SMU_343 PF04191 Phospholipid methyltransferase SMU_344 PF08002 Protein of unknown function (DUF1697) SMU_345c PF01638 HxlR-like helix-turn-helix SMU_346 PF00881 Nitroreductase family SMU_348 PF01230 HIT domain SMU_349 PF00398 Ribosomal RNA adenine dimethylase SMU_35 PF00551 Formyl transferase SMU_351 PF03193 Protein of unknown function, DUF258 SMU_351 PF16745 SMU_351 SMU_352 PF00834 Ribulose-phosphate 3 epimerase family SMU_353 PF04263 Thiamin pyrophosphokinase, catalytic domain SMU_353 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SMU_354 PF02646 SMU_354 SMU_355 PF01966 HD domain SMU_356 PF00156 Phosphoribosyl transferase domain SMU_356 PF09182 Bacterial purine repressor, N-terminal SMU_357 PF00164 Ribosomal protein S12/S23 SMU_358 PF00177 Ribosomal protein S7p/S5e SMU_359 PF00009 Elongation factor Tu GTP binding domain SMU_359 PF00679 Elongation factor G C-terminus SMU_359 PF03144 Elongation factor Tu domain 2 SMU_359 PF03764 Elongation factor G, domain IV SMU_359 PF14492 Elongation Factor G, domain II SMU_36 PF05076 Suppressor of fused protein (SUFU) SMU_360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SMU_360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SMU_361 PF00162 Phosphoglycerate kinase SMU_362 PF06081 SMU_362 SMU_363 PF13411 MerR HTH family regulatory protein SMU_364 PF00120 Glutamine synthetase, catalytic domain SMU_364 PF03951 Glutamine synthetase, beta-Grasp domain SMU_365 PF00310 Glutamine amidotransferases class-II SMU_365 PF01493 GXGXG motif SMU_365 PF01645 Conserved region in glutamate synthase SMU_365 PF04898 Glutamate synthase central domain SMU_366 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_366 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMU_367 PF01476 LysM domain SMU_367 PF05257 CHAP domain SMU_368c PF00753 Metallo-beta-lactamase superfamily SMU_368c PF07521 RNA-metabolising metallo-beta-lactamase SMU_369c PF07288 Protein of unknown function (DUF1447) SMU_37 PF01808 AICARFT/IMPCHase bienzyme SMU_37 PF02142 MGS-like domain SMU_370 PF00005 ABC transporter SMU_371 PF12698 ABC-2 family transporter protein SMU_373 PF08241 Methyltransferase domain SMU_374 PF13561 Enoyl-(Acyl carrier protein) reductase SMU_376 PF00202 Aminotransferase class-III SMU_382c PF00248 Aldo/keto reductase family SMU_383c PF01370 NAD dependent epimerase/dehydratase family SMU_384 PF01047 MarR family SMU_385 PF00814 Glycoprotease family SMU_386 PF13508 Acetyltransferase (GNAT) domain SMU_387 PF00814 Glycoprotease family SMU_388 PF03591 SMU_388 SMU_389 PF05437 SMU_389 SMU_38c PF00440 Bacterial regulatory proteins, tetR family SMU_39 PF13787 SMU_39 SMU_391c PF11208 SMU_391c SMU_392c PF03486 HI0933-like protein SMU_393 PF04394 SMU_393 SMU_394c PF02575 YbaB/EbfC DNA-binding family SMU_395 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SMU_395 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SMU_395 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SMU_396 PF00230 Major intrinsic protein SMU_399 PF14506 CppA N-terminal SMU_399 PF14507 CppA C-terminal SMU_40 PF05016 Plasmid stabilisation system protein SMU_400 PF00144 Beta-lactamase SMU_401c PF13673 Acetyltransferase (GNAT) domain SMU_402 PF01228 Glycine radical SMU_402 PF02901 Pyruvate formate lyase SMU_403 PF00817 impB/mucB/samB family SMU_403 PF11798 IMS family HHH motif SMU_403 PF11799 impB/mucB/samB family C-terminal domain SMU_405c PF01381 Helix-turn-helix SMU_406c PF08282 haloacid dehalogenase-like hydrolase SMU_407 PF07099 SMU_407 SMU_408 PF00860 Permease family SMU_409 PF02367 Uncharacterised P-loop hydrolase UPF0079 SMU_410 PF03816 Cell envelope-related transcriptional attenuator domain SMU_412c PF01230 HIT domain SMU_413 PF00005 ABC transporter SMU_414 PF05975 SMU_414 SMU_415 PF01636 Phosphotransferase enzyme family SMU_416 PF02390 Putative methyltransferase SMU_417 PF02576 Uncharacterised BCR, YhbC family COG0779 SMU_418 PF08529 NusA N-terminal domain SMU_418 PF13184 NusA-like KH domain SMU_419 PF04296 Protein of unknown function (DUF448) SMU_42 PF07751 SMU_42 SMU_420 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SMU_421 PF00009 Elongation factor Tu GTP binding domain SMU_421 PF04760 Translation initiation factor IF-2, N-terminal region SMU_421 PF11987 Translation-initiation factor 2 SMU_422 PF02033 Ribosome-binding factor A SMU_423 PF10439 SMU_423 SMU_424 PF03965 Penicillinase repressor SMU_426 PF00122 E1-E2 ATPase SMU_426 PF00403 Heavy-metal-associated domain SMU_426 PF00702 haloacid dehalogenase-like hydrolase SMU_427 PF00403 Heavy-metal-associated domain SMU_428 PF08282 haloacid dehalogenase-like hydrolase SMU_429c PF10688 SMU_429c SMU_43 PF07669 Eco57I restriction-modification methylase SMU_431 PF00005 ABC transporter SMU_432 PF01061 SMU_432 SMU_433 PF04397 LytTr DNA-binding domain SMU_434 PF11457 SMU_434 SMU_435 PF01979 Amidohydrolase family SMU_436c PF00665 Integrase core domain SMU_436c PF13276 SMU_436c SMU_438c PF01869 BadF/BadG/BcrA/BcrD ATPase family SMU_438c PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SMU_438c PF09989 SMU_438c SMU_439 PF00440 Bacterial regulatory proteins, tetR family SMU_439 PF14278 SMU_439 SMU_44 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_441 PF01047 MarR family SMU_442 PF01878 EVE domain SMU_445 PF02091 Glycyl-tRNA synthetase alpha subunit SMU_446 PF02092 SMU_446 SMU_447 PF05979 Bacterial protein of unknown function (DUF896) SMU_448 PF03413 Peptidase propeptide and YPEB domain SMU_449 PF00696 Amino acid kinase family SMU_45 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_450 PF00171 Aldehyde dehydrogenase family SMU_453 PF01795 MraW methylase family SMU_454 PF04977 Septum formation initiator SMU_455 PF00905 Penicillin binding protein transpeptidase domain SMU_455 PF03717 Penicillin-binding Protein dimerisation domain SMU_455 PF03793 PASTA domain SMU_456 PF00953 Glycosyl transferase family 4 SMU_456 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SMU_458 PF00270 DEAD/DEAH box helicase SMU_458 PF00271 Helicase conserved C-terminal domain SMU_459 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_460 PF00528 Binding-protein-dependent transport system inner membrane component SMU_461 PF00005 ABC transporter SMU_462 PF13268 SMU_462 SMU_463 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_464 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SMU_465 PF02540 NAD synthase SMU_466 PF03051 Peptidase C1-like family SMU_467 PF00905 Penicillin binding protein transpeptidase domain SMU_467 PF00912 Transglycosylase SMU_469 PF03838 Recombination protein U SMU_47 PF01844 HNH endonuclease SMU_470 PF06908 Protein of unknown function (DUF1273) SMU_471 PF05103 DivIVA protein SMU_472 PF01170 Putative RNA methylase family UPF0020 SMU_472 PF02926 THUMP domain SMU_474 PF02664 S-Ribosylhomocysteinase (LuxS) SMU_475 PF00013 KH domain SMU_475 PF01966 HD domain SMU_475 PF12072 SMU_475 SMU_478 PF00625 Guanylate kinase SMU_479 PF01192 RNA polymerase Rpb6 SMU_48 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMU_48 PF02843 Phosphoribosylglycinamide synthetase, C domain SMU_48 PF02844 Phosphoribosylglycinamide synthetase, N domain SMU_480 PF00271 Helicase conserved C-terminal domain SMU_480 PF04851 Type III restriction enzyme, res subunit SMU_481 PF00551 Formyl transferase SMU_481 PF02911 Formyl transferase, C-terminal domain SMU_482 PF01029 NusB family SMU_482 PF01189 NOL1/NOP2/sun family SMU_483 PF13672 Protein phosphatase 2C SMU_484 PF00069 Protein kinase domain SMU_484 PF03793 PASTA domain SMU_485 PF09922 Cell wall-active antibiotics response protein (DUF2154) SMU_486 PF07730 Histidine kinase SMU_487 PF00072 Response regulator receiver domain SMU_487 PF00196 Bacterial regulatory proteins, luxR family SMU_488 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMU_488 PF08282 haloacid dehalogenase-like hydrolase SMU_489 PF00575 S1 RNA binding domain SMU_49 PF02655 ATP-grasp domain SMU_490 PF04055 Radical SAM superfamily SMU_490 PF13353 4Fe-4S single cluster domain SMU_491 PF00455 SMU_491 SMU_491 PF08220 DeoR-like helix-turn-helix domain SMU_493 PF01228 Glycine radical SMU_493 PF02901 Pyruvate formate lyase SMU_494 PF00923 Transaldolase SMU_495 PF00465 Iron-containing alcohol dehydrogenase SMU_496 PF00291 Pyridoxal-phosphate dependent enzyme SMU_497c PF01205 Uncharacterized protein family UPF0029 SMU_497c PF09186 Domain of unknown function (DUF1949) SMU_498 PF00271 Helicase conserved C-terminal domain SMU_498 PF04851 Type III restriction enzyme, res subunit SMU_50 PF00731 AIR carboxylase SMU_500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SMU_500 PF16321 SMU_500 SMU_504 PF02086 D12 class N6 adenine-specific DNA methyltransferase SMU_505 PF01555 DNA methylase SMU_506 PF04556 SMU_506 SMU_507 PF00455 SMU_507 SMU_507 PF08220 DeoR-like helix-turn-helix domain SMU_508 PF08282 haloacid dehalogenase-like hydrolase SMU_509 PF04237 YjbR SMU_51 PF02222 ATP-grasp domain SMU_514 PF00440 Bacterial regulatory proteins, tetR family SMU_514 PF14278 SMU_514 SMU_515 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family SMU_516 PF03602 Conserved hypothetical protein 95 SMU_517 PF01467 Cytidylyltransferase SMU_518 PF05362 Lon protease (S16) C-terminal proteolytic domain SMU_518 PF13180 PDZ domain SMU_520 PF00149 Calcineurin-like phosphoesterase SMU_521 PF06265 Protein of unknown function (DUF1027) SMU_522 PF04055 Radical SAM superfamily SMU_522 PF13394 4Fe-4S single cluster domain SMU_523 PF04892 SMU_523 SMU_524 PF00005 ABC transporter SMU_524 PF00664 ABC transporter transmembrane region SMU_525 PF00005 ABC transporter SMU_525 PF00664 ABC transporter transmembrane region SMU_526c PF13411 MerR HTH family regulatory protein SMU_527 PF01113 Dihydrodipicolinate reductase, N-terminus SMU_528c PF03992 Antibiotic biosynthesis monooxygenase SMU_530c PF06161 SMU_530c SMU_531 PF01817 Chorismate mutase type II SMU_532 PF00425 chorismate binding enzyme SMU_532 PF04715 Anthranilate synthase component I, N terminal region SMU_533 PF00117 Glutamine amidotransferase class-I SMU_534 PF00591 Glycosyl transferase family, a/b domain SMU_534 PF02885 Glycosyl transferase family, helical bundle domain SMU_535 PF00218 Indole-3-glycerol phosphate synthase SMU_536 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SMU_537 PF00291 Pyridoxal-phosphate dependent enzyme SMU_538 PF00290 Tryptophan synthase alpha chain SMU_539c PF06750 SMU_539c SMU_54 PF01177 Asp/Glu/Hydantoin racemase SMU_540 PF00210 Ferritin-like domain SMU_541 PF06014 Bacterial protein of unknown function (DUF910) SMU_542 PF00480 ROK family SMU_543 PF00581 Rhodanese-like domain SMU_546 PF00009 Elongation factor Tu GTP binding domain SMU_546 PF00679 Elongation factor G C-terminus SMU_546 PF03144 Elongation factor Tu domain 2 SMU_547 PF11364 SMU_547 SMU_548 PF02875 Mur ligase family, glutamate ligase domain SMU_548 PF08245 Mur ligase middle domain SMU_549 PF03033 Glycosyltransferase family 28 N-terminal domain SMU_549 PF04101 Glycosyltransferase family 28 C-terminal domain SMU_550 PF03799 Cell division protein FtsQ SMU_550 PF08478 POTRA domain, FtsQ-type SMU_551 PF02491 SHS2 domain inserted in FTSA SMU_551 PF11983 SMU_551 SMU_551 PF14450 Cell division protein FtsA SMU_552 PF00091 Tubulin/FtsZ family, GTPase domain SMU_552 PF12327 FtsZ family, C-terminal domain SMU_553 PF01168 Alanine racemase, N-terminal domain SMU_554 PF04472 Protein of unknown function (DUF552) SMU_555 PF02325 SMU_555 SMU_556 PF01479 S4 domain SMU_557 PF05103 DivIVA protein SMU_558 PF00133 tRNA synthetases class I (I, L, M and V) SMU_558 PF06827 Zinc finger found in FPG and IleRS SMU_558 PF08264 Anticodon-binding domain of tRNA SMU_560c PF08860 Domain of unknown function (DUF1827) SMU_561c PF00293 NUDIX domain SMU_562 PF00004 ATPase family associated with various cellular activities (AAA) SMU_562 PF02151 UvrB/uvrC motif SMU_562 PF07724 AAA domain (Cdc48 subfamily) SMU_562 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_563 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMU_563 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMU_564 PF08796 Protein of unknown function (DUF1797) SMU_565c PF00665 Integrase core domain SMU_565c PF13276 SMU_565c SMU_566c PF01527 Transposase SMU_567 PF00528 Binding-protein-dependent transport system inner membrane component SMU_568 PF00005 ABC transporter SMU_569 PF04023 FeoA domain SMU_570 PF02421 Ferrous iron transport protein B SMU_570 PF07664 SMU_570 SMU_570 PF07670 Nucleoside recognition SMU_571 PF12669 SMU_571 SMU_572 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SMU_572 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SMU_573 PF01256 Carbohydrate kinase SMU_574c PF04172 SMU_574c SMU_575c PF03788 SMU_575c SMU_576 PF00072 Response regulator receiver domain SMU_576 PF04397 LytTr DNA-binding domain SMU_577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_577 PF06580 SMU_577 SMU_577 PF07694 5TMR of 5TMR-LYT SMU_580 PF02601 SMU_580 SMU_580 PF13742 SMU_580 SMU_581 PF02609 Exonuclease VII small subunit SMU_582 PF00348 Polyprenyl synthetase SMU_583 PF01479 S4 domain SMU_583 PF01728 FtsJ-like methyltransferase SMU_584 PF01316 Arginine repressor, DNA binding domain SMU_585 PF02463 RecF/RecN/SMC N terminal domain SMU_586 PF02645 Uncharacterised protein, DegV family COG1307 SMU_587 PF13472 GDSL-like Lipase/Acylhydrolase family SMU_588 PF09911 SMU_588 SMU_589 PF00216 Bacterial DNA-binding protein SMU_59 PF00206 Lyase SMU_59 PF10397 Adenylosuccinate lyase C-terminus SMU_590c PF13333 SMU_590c SMU_592c PF00440 Bacterial regulatory proteins, tetR family SMU_593 PF01475 Ferric uptake regulator family SMU_595 PF01180 Dihydroorotate dehydrogenase SMU_596 PF00300 Histidine phosphatase superfamily (branch 1) SMU_597 PF00905 Penicillin binding protein transpeptidase domain SMU_597 PF03717 Penicillin-binding Protein dimerisation domain SMU_598 PF02132 RecR protein SMU_598 PF13662 Toprim domain SMU_599 PF01820 D-ala D-ala ligase N-terminus SMU_599 PF07478 D-ala D-ala ligase C-terminus SMU_60 PF08713 DNA alkylation repair enzyme SMU_600c PF07155 ECF-type riboflavin transporter, S component SMU_602 PF01758 Sodium Bile acid symporter family SMU_603 PF01225 Mur ligase family, catalytic domain SMU_603 PF02875 Mur ligase family, glutamate ligase domain SMU_603 PF08245 Mur ligase middle domain SMU_607 PF09529 SMU_607 SMU_608 PF00009 Elongation factor Tu GTP binding domain SMU_608 PF03144 Elongation factor Tu domain 2 SMU_608 PF16658 SMU_608 SMU_609 PF04650 SMU_609 SMU_609 PF08460 Bacterial SH3 domain SMU_609 PF08481 SMU_609 SMU_61 PF12844 Helix-turn-helix domain SMU_610 PF00746 SMU_610 SMU_610 PF06696 Streptococcal surface antigen repeat SMU_610 PF08363 Glucan-binding protein C SMU_610 PF16364 SMU_610 SMU_611 PF00270 DEAD/DEAH box helicase SMU_611 PF00271 Helicase conserved C-terminal domain SMU_621c PF01541 GIY-YIG catalytic domain SMU_621c PF05175 Methyltransferase small domain SMU_622c PF13787 SMU_622c SMU_623c PF01522 Polysaccharide deacetylase SMU_624 PF01553 Acyltransferase SMU_625 PF10531 SLBB domain SMU_625 PF12836 Helix-hairpin-helix motif SMU_626 PF00753 Metallo-beta-lactamase superfamily SMU_626 PF03772 SMU_626 SMU_626 PF13567 SMU_626 SMU_627 PF05656 SMU_627 SMU_628 PF06144 DNA polymerase III, delta subunit SMU_629 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMU_629 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMU_630 PF13354 Beta-lactamase enzyme family SMU_631 PF10086 SMU_631 SMU_632 PF01047 MarR family SMU_633 PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region SMU_633 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal SMU_634 PF02547 Queuosine biosynthesis protein SMU_635 PF01988 SMU_635 SMU_636 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SMU_638 PF00849 RNA pseudouridylate synthase SMU_638 PF01479 S4 domain SMU_639 PF13673 Acetyltransferase (GNAT) domain SMU_63c PF14262 Domain of unknown function (DUF4353) SMU_64 PF05491 Holliday junction DNA helicase ruvB C-terminus SMU_64 PF05496 Holliday junction DNA helicase ruvB N-terminus SMU_640c PF00155 Aminotransferase class I and II SMU_640c PF00392 Bacterial regulatory proteins, gntR family SMU_641 PF00107 Zinc-binding dehydrogenase SMU_641 PF08240 Alcohol dehydrogenase GroES-like domain SMU_643 PF07859 alpha/beta hydrolase fold SMU_644 PF06054 SMU_644 SMU_645 PF01432 Peptidase family M3 SMU_645 PF08439 Oligopeptidase F SMU_646 PF13419 Haloacid dehalogenase-like hydrolase SMU_647 PF01596 O-methyltransferase SMU_648 PF13145 PPIC-type PPIASE domain SMU_649 PF04525 Tubby C 2 SMU_65 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMU_650 PF01411 tRNA synthetases class II (A) SMU_650 PF02272 DHHA1 domain SMU_650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMU_651c PF09084 NMT1/THI5 like SMU_652c PF00005 ABC transporter SMU_653c PF00528 Binding-protein-dependent transport system inner membrane component SMU_654 PF00005 ABC transporter SMU_658 PF05857 SMU_658 SMU_659 PF00072 Response regulator receiver domain SMU_659 PF00486 Transcriptional regulatory protein, C terminal SMU_66 PF02493 MORN repeat SMU_660 PF00512 His Kinase A (phospho-acceptor) domain SMU_660 PF00672 HAMP domain SMU_660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_661 PF01381 Helix-turn-helix SMU_662 PF02517 CAAX protease self-immunity SMU_663 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMU_663 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMU_664 PF01960 ArgJ family SMU_665 PF00696 Amino acid kinase family SMU_666 PF00202 Aminotransferase class-III SMU_667 PF00268 Ribonucleotide reductase, small chain SMU_668c PF00317 Ribonucleotide reductase, all-alpha domain SMU_668c PF02867 Ribonucleotide reductase, barrel domain SMU_668c PF08343 Ribonucleotide reductase N-terminal SMU_669c PF00462 Glutaredoxin SMU_67 PF01757 SMU_67 SMU_670 PF00330 Aconitase family (aconitate hydratase) SMU_670 PF00694 Aconitase C-terminal domain SMU_671 PF00285 Citrate synthase SMU_672 PF00180 Isocitrate/isopropylmalate dehydrogenase SMU_673 PF06541 SMU_673 SMU_674 PF00381 PTS HPr component phosphorylation site SMU_675 PF00391 PEP-utilising enzyme, mobile domain SMU_675 PF02896 PEP-utilising enzyme, TIM barrel domain SMU_675 PF05524 PEP-utilising enzyme, N-terminal SMU_676 PF00171 Aldehyde dehydrogenase family SMU_677 PF13411 MerR HTH family regulatory protein SMU_678 PF00248 Aldo/keto reductase family SMU_679 PF00248 Aldo/keto reductase family SMU_680 PF02627 Carboxymuconolactone decarboxylase family SMU_681 PF01661 Macro domain SMU_682 PF00350 Dynamin family SMU_683 PF01935 Domain of unknown function DUF87 SMU_684 PF14411 SMU_684 SMU_685 PF14568 SMI1-KNR4 cell-wall SMU_688 PF03692 SMU_688 SMU_689 PF01183 Glycosyl hydrolases family 25 SMU_689 PF08481 SMU_689 SMU_691 PF01546 Peptidase family M20/M25/M40 SMU_691 PF07687 Peptidase dimerisation domain SMU_694c PF13459 4Fe-4S single cluster domain SMU_695 PF01476 LysM domain SMU_696 PF02224 Cytidylate kinase SMU_697 PF00707 Translation initiation factor IF-3, C-terminal domain SMU_697 PF05198 Translation initiation factor IF-3, N-terminal domain SMU_698 PF01632 Ribosomal protein L35 SMU_699 PF00453 Ribosomal protein L20 SMU_70 PF00291 Pyridoxal-phosphate dependent enzyme SMU_70 PF14821 Threonine synthase N terminus SMU_700c PF00300 Histidine phosphatase superfamily (branch 1) SMU_701c PF03733 SMU_701c SMU_702c PF04073 Aminoacyl-tRNA editing domain SMU_703c PF04018 SMU_703c SMU_704c PF01510 N-acetylmuramoyl-L-alanine amidase SMU_706c PF09515 Thiamine transporter protein (Thia_YuaJ) SMU_707c PF01183 Glycosyl hydrolases family 25 SMU_71 PF01554 MatE SMU_711 PF14478 Domain of unknown function (DUF4430) SMU_712 PF00311 Phosphoenolpyruvate carboxylase SMU_713 PF01098 SMU_713 SMU_714 PF00009 Elongation factor Tu GTP binding domain SMU_714 PF03143 Elongation factor Tu C-terminal domain SMU_714 PF03144 Elongation factor Tu domain 2 SMU_715 PF00121 Triosephosphate isomerase SMU_716 PF02388 FemAB family SMU_717 PF02388 FemAB family SMU_718c PF08282 haloacid dehalogenase-like hydrolase SMU_719c PF01966 HD domain SMU_72 PF13740 ACT domain SMU_720 PF01925 SMU_720 SMU_721 PF09148 Domain of unknown function (DUF1934) SMU_723 PF00122 E1-E2 ATPase SMU_723 PF00689 Cation transporting ATPase, C-terminus SMU_723 PF00690 Cation transporter/ATPase, N-terminus SMU_723 PF00702 haloacid dehalogenase-like hydrolase SMU_724 PF03009 Glycerophosphoryl diester phosphodiesterase family SMU_727 PF13411 MerR HTH family regulatory protein SMU_728 PF08240 Alcohol dehydrogenase GroES-like domain SMU_728 PF13602 Zinc-binding dehydrogenase SMU_73 PF05167 Uncharacterised ACR (DUF711) SMU_730 PF04014 Antidote-toxin recognition MazE SMU_731 PF00005 ABC transporter SMU_732 PF13346 SMU_732 SMU_737 PF12146 Putative lysophospholipase SMU_74 PF00300 Histidine phosphatase superfamily (branch 1) SMU_741 PF11311 SMU_741 SMU_742 PF08282 haloacid dehalogenase-like hydrolase SMU_743 PF08282 haloacid dehalogenase-like hydrolase SMU_744 PF00448 SRP54-type protein, GTPase domain SMU_744 PF02881 SRP54-type protein, helical bundle domain SMU_745 PF07690 Major Facilitator Superfamily SMU_746c PF09323 SMU_746c SMU_747c PF03773 SMU_747c SMU_75 PF02557 D-alanyl-D-alanine carboxypeptidase SMU_751 PF00575 S1 RNA binding domain SMU_751 PF09371 Tex-like protein N-terminal domain SMU_751 PF12836 Helix-hairpin-helix motif SMU_751 PF16921 SMU_751 SMU_752 PF10263 SMU_752 SMU_753 PF04024 SMU_753 SMU_754 PF02603 HPr Serine kinase N terminus SMU_754 PF07475 HPr Serine kinase C-terminal domain SMU_755 PF01790 SMU_755 SMU_756 PF06103 SMU_756 SMU_757 PF12732 SMU_757 SMU_758c PF11674 SMU_758c SMU_759 PF01136 SMU_759 SMU_76 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMU_761 PF01136 SMU_761 SMU_761 PF16325 SMU_761 SMU_764 PF00578 AhpC/TSA family SMU_764 PF10417 C-terminal domain of 1-Cys peroxiredoxin SMU_765 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_765 PF13192 Thioredoxin domain SMU_766 PF01527 Transposase SMU_767 PF00665 Integrase core domain SMU_767 PF13276 SMU_767 SMU_769 PF02229 Transcriptional Coactivator p15 (PC4) SMU_770c PF01566 SMU_770c SMU_772 PF01473 Putative cell wall binding repeat SMU_772 PF04650 SMU_772 SMU_772 PF10503 Esterase PHB depolymerase SMU_773c PF00152 tRNA synthetases class II (D, K and N) SMU_773c PF01336 OB-fold nucleic acid binding domain SMU_774 PF13419 Haloacid dehalogenase-like hydrolase SMU_775c PF00884 Sulfatase SMU_776 PF10672 S-adenosylmethionine-dependent methyltransferase SMU_777 PF01487 Type I 3-dehydroquinase SMU_778 PF08501 Shikimate dehydrogenase substrate binding domain SMU_779 PF01761 3-dehydroquinate synthase SMU_78 PF00251 Glycosyl hydrolases family 32 N-terminal domain SMU_78 PF02368 Bacterial Ig-like domain (group 2) SMU_78 PF08244 Glycosyl hydrolases family 32 C terminal SMU_78 PF12733 SMU_78 SMU_780 PF01264 Chorismate synthase SMU_781 PF02153 Prephenate dehydrogenase SMU_782 PF06133 Protein of unknown function (DUF964) SMU_784 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMU_785 PF01202 Shikimate kinase SMU_786 PF00800 Prephenate dehydratase SMU_787 PF03816 Cell envelope-related transcriptional attenuator domain SMU_788 PF01938 TRAM domain SMU_788 PF05958 tRNA (Uracil-5-)-methyltransferase SMU_789 PF02517 CAAX protease self-immunity SMU_79 PF00251 Glycosyl hydrolases family 32 N-terminal domain SMU_790 PF01381 Helix-turn-helix SMU_793 PF03061 Thioesterase superfamily SMU_795 PF13279 Thioesterase-like superfamily SMU_796 PF05368 NmrA-like family SMU_797 PF15507 Domain of unknown function (DUF4649) SMU_80 PF01628 HrcA protein C terminal domain SMU_80 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SMU_800 PF13253 SMU_800 SMU_801 PF01018 GTP1/OBG SMU_801 PF01926 50S ribosome-binding GTPase SMU_801 PF09269 Domain of unknown function (DUF1967) SMU_803c PF00005 ABC transporter SMU_804 PF08867 SMU_804 SMU_805c PF00005 ABC transporter SMU_806c PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_806c PF00528 Binding-protein-dependent transport system inner membrane component SMU_807 PF02517 CAAX protease self-immunity SMU_809 PF00271 Helicase conserved C-terminal domain SMU_809 PF02151 UvrB/uvrC motif SMU_809 PF04851 Type III restriction enzyme, res subunit SMU_809 PF12344 Ultra-violet resistance protein B SMU_81 PF01025 GrpE SMU_813 PF01381 Helix-turn-helix SMU_814 PF00293 NUDIX domain SMU_815 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_816 PF00155 Aminotransferase class I and II SMU_817 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_818 PF01165 Ribosomal protein S21 SMU_819 PF01741 Large-conductance mechanosensitive channel, MscL SMU_82 PF00012 Hsp70 protein SMU_821 PF01807 CHC2 zinc finger SMU_821 PF08275 DNA primase catalytic core, N-terminal domain SMU_821 PF13155 Toprim-like SMU_822 PF00140 Sigma-70 factor, region 1 SMU_822 PF03979 Sigma-70 factor, region 1 SMU_822 PF04539 Sigma-70 region 3 SMU_822 PF04542 Sigma-70 region 2 SMU_822 PF04545 Sigma-70, region 4 SMU_823 PF01883 Domain of unknown function DUF59 SMU_824 PF04321 RmlD substrate binding domain SMU_825 PF09314 SMU_825 SMU_826 PF00535 Glycosyl transferase family 2 SMU_827 PF01061 SMU_827 SMU_828 PF00005 ABC transporter SMU_829 PF00535 Glycosyl transferase family 2 SMU_83 PF00226 DnaJ domain SMU_83 PF00684 DnaJ central domain SMU_83 PF01556 DnaJ C terminal domain SMU_830 PF05045 SMU_830 SMU_831 PF00884 Sulfatase SMU_833 PF00535 Glycosyl transferase family 2 SMU_834 PF00535 Glycosyl transferase family 2 SMU_836 PF05257 CHAP domain SMU_836 PF08481 SMU_836 SMU_837 PF00248 Aldo/keto reductase family SMU_838 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMU_838 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_839 PF02875 Mur ligase family, glutamate ligase domain SMU_839 PF08245 Mur ligase middle domain SMU_84 PF01416 tRNA pseudouridine synthase SMU_841 PF00266 Aminotransferase class-V SMU_842 PF02568 Thiamine biosynthesis protein (ThiI) SMU_842 PF02926 THUMP domain SMU_843 PF09587 Bacterial capsule synthesis protein PGA_cap SMU_844 PF13508 Acetyltransferase (GNAT) domain SMU_845 PF06736 SMU_845 SMU_846 PF00829 Ribosomal prokaryotic L21 protein SMU_848 PF04327 Protein of unknown function (DUF464) SMU_849 PF01016 Ribosomal L27 protein SMU_85 PF08543 Phosphomethylpyrimidine kinase SMU_850 PF13302 Acetyltransferase (GNAT) domain SMU_851 PF00293 NUDIX domain SMU_852 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_852 PF03466 LysR substrate binding domain SMU_853 PF01252 SMU_853 SMU_854 PF00849 RNA pseudouridylate synthase SMU_854 PF01479 S4 domain SMU_855 PF09335 SMU_855 SMU_856 PF00156 Phosphoribosyl transferase domain SMU_857 PF00860 Permease family SMU_858 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMU_858 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMU_859 PF00117 Glutamine amidotransferase class-I SMU_859 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SMU_86 PF07155 ECF-type riboflavin transporter, S component SMU_860 PF02142 MGS-like domain SMU_860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMU_860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SMU_862 PF16576 SMU_862 SMU_863 PF00005 ABC transporter SMU_864 PF02687 SMU_864 SMU_864 PF12704 MacB-like periplasmic core domain SMU_865 PF00886 Ribosomal protein S16 SMU_866 PF13083 KH domain SMU_867 PF01782 RimM N-terminal domain SMU_867 PF05239 PRC-barrel domain SMU_868 PF01746 tRNA (Guanine-1)-methyltransferase SMU_869 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMU_87 PF04260 Protein of unknown function (DUF436) SMU_870 PF00455 SMU_870 SMU_870 PF08220 DeoR-like helix-turn-helix domain SMU_871 PF00294 pfkB family carbohydrate kinase SMU_872 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMU_872 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMU_872 PF02378 Phosphotransferase system, EIIC SMU_873 PF01717 Cobalamin-independent synthase, Catalytic domain SMU_873 PF08267 Cobalamin-independent synthase, N-terminal domain SMU_874 PF02219 Methylenetetrahydrofolate reductase SMU_874 PF02574 Homocysteine S-methyltransferase SMU_875c PF00665 Integrase core domain SMU_876 PF02311 AraC-like ligand binding domain SMU_876 PF12833 Helix-turn-helix domain SMU_877 PF02065 Melibiase SMU_877 PF16874 SMU_877 SMU_877 PF16875 SMU_877 SMU_878 PF01547 Bacterial extracellular solute-binding protein SMU_879 PF00528 Binding-protein-dependent transport system inner membrane component SMU_880 PF00528 Binding-protein-dependent transport system inner membrane component SMU_881 PF00128 Alpha amylase, catalytic domain SMU_882 PF00005 ABC transporter SMU_882 PF03459 TOBE domain SMU_883 PF00128 Alpha amylase, catalytic domain SMU_883 PF16657 SMU_883 SMU_885 PF00356 Bacterial regulatory proteins, lacI family SMU_885 PF13377 Periplasmic binding protein-like domain SMU_886 PF00288 GHMP kinases N terminal domain SMU_886 PF08544 GHMP kinases C terminal SMU_886 PF10509 Galactokinase galactose-binding signature SMU_887 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SMU_887 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SMU_888 PF01370 NAD dependent epimerase/dehydratase family SMU_889 PF00144 Beta-lactamase SMU_88c PF00924 Mechanosensitive ion channel SMU_890 PF01569 PAP2 superfamily SMU_891 PF02384 N-6 DNA Methylase SMU_891 PF12161 HsdM N-terminal domain SMU_892 PF01420 Type I restriction modification DNA specificity domain SMU_893 PF13166 SMU_893 SMU_895 PF04221 RelB antitoxin SMU_896 PF15738 SMU_896 SMU_897 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SMU_897 PF04851 Type III restriction enzyme, res subunit SMU_897 PF12008 Type I restriction and modification enzyme - subunit R C terminal SMU_898 PF06619 Protein of unknown function (DUF1149) SMU_899 PF02645 Uncharacterised protein, DegV family COG1307 SMU_89c PF01226 Formate/nitrite transporter SMU_900 PF01113 Dihydrodipicolinate reductase, N-terminus SMU_900 PF05173 Dihydrodipicolinate reductase, C-terminus SMU_901 PF01743 Poly A polymerase head domain SMU_901 PF12627 Probable RNA and SrmB- binding site of polymerase A SMU_901 PF13735 tRNA nucleotidyltransferase domain 2 putative SMU_902 PF00005 ABC transporter SMU_902 PF12848 ABC transporter SMU_902 PF16326 SMU_902 SMU_905 PF00005 ABC transporter SMU_905 PF00664 ABC transporter transmembrane region SMU_906 PF00005 ABC transporter SMU_906 PF00664 ABC transporter transmembrane region SMU_909 PF03547 SMU_909 SMU_91 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMU_91 PF05697 Bacterial trigger factor protein (TF) SMU_91 PF05698 Bacterial trigger factor protein (TF) C-terminus SMU_910 PF01473 Putative cell wall binding repeat SMU_910 PF02324 Glycosyl hydrolase family 70 SMU_911c PF03729 SMU_911c SMU_913 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMU_913 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMU_914c PF11457 SMU_914c SMU_915c PF14489 QueF-like protein SMU_916c PF04055 Radical SAM superfamily SMU_916c PF13353 4Fe-4S single cluster domain SMU_917c PF01242 6-pyruvoyl tetrahydropterin synthase SMU_919c PF06508 Queuosine biosynthesis protein QueC SMU_921 PF12802 MarR family SMU_922 PF00005 ABC transporter SMU_922 PF00664 ABC transporter transmembrane region SMU_923 PF00005 ABC transporter SMU_923 PF00664 ABC transporter transmembrane region SMU_924 PF08534 Redoxin SMU_926 PF04607 Region found in RelA / SpoT proteins SMU_927 PF00072 Response regulator receiver domain SMU_927 PF00486 Transcriptional regulatory protein, C terminal SMU_928 PF00512 His Kinase A (phospho-acceptor) domain SMU_928 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMU_929c PF06993 SMU_929c SMU_930c PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMU_930c PF03466 LysR substrate binding domain SMU_932 PF01208 Uroporphyrinogen decarboxylase (URO-D) SMU_933 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMU_934 PF00528 Binding-protein-dependent transport system inner membrane component SMU_935 PF00528 Binding-protein-dependent transport system inner membrane component SMU_936 PF00005 ABC transporter SMU_937 PF00288 GHMP kinases N terminal domain SMU_938 PF00288 GHMP kinases N terminal domain SMU_939 PF01070 FMN-dependent dehydrogenase SMU_940c PF03006 SMU_940c SMU_941c PF08876 SMU_941c SMU_942 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SMU_943c PF00195 Chalcone and stilbene synthases, N-terminal domain SMU_943c PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SMU_944 PF00303 Thymidylate synthase SMU_946 PF04973 SMU_946 SMU_947 PF00186 Dihydrofolate reductase SMU_949 PF06689 ClpX C4-type zinc finger SMU_949 PF07724 AAA domain (Cdc48 subfamily) SMU_949 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_950 PF01926 50S ribosome-binding GTPase SMU_951 PF00324 Amino acid permease SMU_952 PF02574 Homocysteine S-methyltransferase SMU_953c PF00155 Aminotransferase class I and II SMU_953c PF00392 Bacterial regulatory proteins, gntR family SMU_954 PF08543 Phosphomethylpyrimidine kinase SMU_955 PF07155 ECF-type riboflavin transporter, S component SMU_956 PF00004 ATPase family associated with various cellular activities (AAA) SMU_956 PF07724 AAA domain (Cdc48 subfamily) SMU_956 PF10431 C-terminal, D2-small domain, of ClpB protein SMU_957 PF00466 Ribosomal protein L10 SMU_960 PF00542 Ribosomal protein L7/L12 C-terminal domain SMU_960 PF16320 SMU_960 SMU_961 PF02627 Carboxymuconolactone decarboxylase family SMU_962 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMU_963c PF01522 Polysaccharide deacetylase SMU_965 PF00742 Homoserine dehydrogenase SMU_965 PF03447 Homoserine dehydrogenase, NAD binding domain SMU_966 PF00288 GHMP kinases N terminal domain SMU_966 PF08544 GHMP kinases C terminal SMU_967 PF08245 Mur ligase middle domain SMU_968 PF01227 GTP cyclohydrolase I SMU_969 PF00809 Pterin binding enzyme SMU_97 PF00117 Glutamine amidotransferase class-I SMU_97 PF06418 CTP synthase N-terminus SMU_970 PF02152 Dihydroneopterin aldolase SMU_971 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SMU_972 PF01565 FAD binding domain SMU_972 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SMU_973 PF00005 ABC transporter SMU_973 PF08402 TOBE domain SMU_974 PF00528 Binding-protein-dependent transport system inner membrane component SMU_975 PF00528 Binding-protein-dependent transport system inner membrane component SMU_976 PF13416 Bacterial extracellular solute-binding protein SMU_977 PF00874 PRD domain SMU_980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMU_980 PF00367 phosphotransferase system, EIIB SMU_980 PF02378 Phosphotransferase system, EIIC SMU_983 PF02311 AraC-like ligand binding domain SMU_983 PF12833 Helix-turn-helix domain SMU_984 PF05257 CHAP domain SMU_985 PF00232 Glycosyl hydrolase family 1 SMU_986c PF01381 Helix-turn-helix SMU_987 PF00746 SMU_987 SMU_987 PF05737 Collagen binding domain SMU_988 PF13091 PLD-like domain SMU_989 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMU_989 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMU_99 PF01116 Fructose-bisphosphate aldolase class-II SMU_990 PF00701 Dihydrodipicolinate synthetase family SMU_991 PF03477 ATP cone domain SMU_993 PF01926 50S ribosome-binding GTPase SMU_994 PF01351 Ribonuclease HII SMU_995 PF01032 FecCD transport family SMU_996 PF01032 FecCD transport family SMU_997 PF00005 ABC transporter SMU_998 PF01497 Periplasmic binding protein