SPAF_RS00005 SM00382 ATPases associated with a variety of cellular activities SPAF_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SPAF_RS00010 SM00480 DNA polymerase III beta subunit SPAF_RS00035 SM00487 DEAD-like helicases superfamily SPAF_RS00035 SM00490 helicase superfamily c-terminal domain SPAF_RS00035 SM00982 SPAF_RS00035 SPAF_RS00035 SM01058 CarD-like/TRCF domain SPAF_RS00040 SM00363 S4 RNA-binding domain SPAF_RS00055 SM00977 TilS substrate C-terminal domain SPAF_RS00065 SM00382 ATPases associated with a variety of cellular activities SPAF_RS00220 SM01400 SPAF_RS00220 SPAF_RS00260 SM01211 SPAF_RS00260 SPAF_RS00285 SM00798 AICARFT/IMPCHase bienzyme SPAF_RS00285 SM00851 MGS-like domain SPAF_RS00295 SM01209 SPAF_RS00295 SPAF_RS00295 SM01210 SPAF_RS00295 SPAF_RS00300 SM01001 AIR carboxylase SPAF_RS00320 SM00220 Serine/Threonine protein kinases, catalytic domain SPAF_RS00325 SM00998 Adenylosuccinate lyase C-terminus SPAF_RS00330 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPAF_RS00330 SM00866 SPAF_RS00330 SPAF_RS00375 SM00382 ATPases associated with a variety of cellular activities SPAF_RS00385 SM00226 Low molecular weight phosphatase family SPAF_RS00390 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SPAF_RS00420 SM00829 Enoylreductase SPAF_RS00460 SM01130 SPAF_RS00460 SPAF_RS00525 SM00257 Lysin motif SPAF_RS00535 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS00545 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPAF_RS00575 SM00244 prohibitin homologues SPAF_RS00620 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS00665 SM00812 Alpha-L-fucosidase SPAF_RS00670 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SPAF_RS00670 SM00474 3'-5' exonuclease SPAF_RS00670 SM00475 5'-3' exonuclease SPAF_RS00670 SM00482 DNA polymerase A domain SPAF_RS00675 SM00881 CoA binding domain SPAF_RS00690 SM01403 SPAF_RS00690 SPAF_RS00710 SM01382 SPAF_RS00710 SPAF_RS00710 SM01383 SPAF_RS00710 SPAF_RS00725 SM00322 K homology RNA-binding domain SPAF_RS00745 SM01374 SPAF_RS00745 SPAF_RS00805 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS00820 SM00662 RNA polymerases D SPAF_RS00880 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS00900 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SPAF_RS00905 SM00822 SPAF_RS00905 SPAF_RS00910 SM00825 Beta-ketoacyl synthase SPAF_RS00925 SM00878 Biotin carboxylase C-terminal domain SPAF_RS00965 SM00829 Enoylreductase SPAF_RS01005 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01030 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS01030 SM00322 K homology RNA-binding domain SPAF_RS01115 SM00740 SPAF_RS01115 SPAF_RS01125 SM00487 DEAD-like helicases superfamily SPAF_RS01125 SM00490 helicase superfamily c-terminal domain SPAF_RS01135 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01195 SM00981 SPAF_RS01195 SPAF_RS01215 SM00322 K homology RNA-binding domain SPAF_RS01215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPAF_RS01220 SM00072 Guanylate kinase homologues. SPAF_RS01225 SM01409 SPAF_RS01225 SPAF_RS01230 SM00487 DEAD-like helicases superfamily SPAF_RS01230 SM00490 helicase superfamily c-terminal domain SPAF_RS01245 SM00331 Sigma factor PP2C-like phosphatases SPAF_RS01245 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SPAF_RS01250 SM00220 Serine/Threonine protein kinases, catalytic domain SPAF_RS01250 SM00740 SPAF_RS01250 SPAF_RS01265 SM00387 Histidine kinase-like ATPases SPAF_RS01270 SM00421 helix_turn_helix, Lux Regulon SPAF_RS01270 SM00448 cheY-homologous receiver domain SPAF_RS01280 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS01295 SM00487 DEAD-like helicases superfamily SPAF_RS01295 SM00490 helicase superfamily c-terminal domain SPAF_RS01415 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS01425 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS01430 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01460 SM01149 SPAF_RS01460 SPAF_RS01465 SM00872 Alpha mannosidase, middle domain SPAF_RS01505 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS01505 SM00448 cheY-homologous receiver domain SPAF_RS01530 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01540 SM00850 LytTr DNA-binding domain SPAF_RS01550 SM00363 S4 RNA-binding domain SPAF_RS01565 SM00663 RNA polymerase I subunit A N-terminus SPAF_RS01595 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01660 SM00905 Dihydroneopterin aldolase SPAF_RS01705 SM00421 helix_turn_helix, Lux Regulon SPAF_RS01705 SM00448 cheY-homologous receiver domain SPAF_RS01740 SM00883 Chaperonin 10 Kd subunit SPAF_RS01755 SM00448 cheY-homologous receiver domain SPAF_RS01755 SM00850 LytTr DNA-binding domain SPAF_RS01765 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01775 SM00354 helix_turn _helix lactose operon repressor SPAF_RS01790 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS01815 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPAF_RS01875 SM00954 Region found in RelA / SpoT proteins SPAF_RS01885 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS01885 SM00529 Helix-turn-helix diphteria tox regulatory element SPAF_RS01910 SM00382 ATPases associated with a variety of cellular activities SPAF_RS01925 SM00420 helix_turn_helix, Deoxyribose operon repressor SPAF_RS01925 SM01134 SPAF_RS01925 SPAF_RS01985 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS01995 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPAF_RS02005 SM00478 endonuclease III SPAF_RS02045 SM00062 Bacterial periplasmic substrate-binding proteins SPAF_RS02060 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02100 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02100 SM01086 C-terminal, D2-small domain, of ClpB protein SPAF_RS02110 SM01323 SPAF_RS02110 SPAF_RS02160 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02195 SM00479 SPAF_RS02195 SPAF_RS02195 SM00481 DNA polymerase alpha chain like domain SPAF_RS02215 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02230 SM00100 Cyclic nucleotide-monophosphate binding domain SPAF_RS02245 SM00363 S4 RNA-binding domain SPAF_RS02255 SM01387 SPAF_RS02255 SPAF_RS02300 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS02300 SM00322 K homology RNA-binding domain SPAF_RS02315 SM00840 SPAF_RS02315 SPAF_RS02320 SM00535 Ribonuclease III family SPAF_RS02330 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02335 SM00642 Alpha-amylase domain SPAF_RS02350 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPAF_RS02390 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPAF_RS02405 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS02435 SM00829 Enoylreductase SPAF_RS02465 SM00855 Phosphoglycerate mutase family SPAF_RS02495 SM00271 DnaJ molecular chaperone homology domain SPAF_RS02500 SM01208 SPAF_RS02500 SPAF_RS02535 SM00873 B3/4 domain SPAF_RS02585 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02620 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02640 SM00850 LytTr DNA-binding domain SPAF_RS02660 SM01120 SPAF_RS02660 SPAF_RS02660 SM01121 SPAF_RS02660 SPAF_RS02675 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02690 SM00421 helix_turn_helix, Lux Regulon SPAF_RS02690 SM00448 cheY-homologous receiver domain SPAF_RS02715 SM00244 prohibitin homologues SPAF_RS02725 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02730 SM00062 Bacterial periplasmic substrate-binding proteins SPAF_RS02755 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02780 SM00936 Penicillin-binding protein 5, C-terminal domain SPAF_RS02800 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02805 SM00382 ATPases associated with a variety of cellular activities SPAF_RS02970 SM01103 SPAF_RS02970 SPAF_RS02980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPAF_RS03035 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS03080 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS03080 SM00448 cheY-homologous receiver domain SPAF_RS03085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPAF_RS03085 SM00387 Histidine kinase-like ATPases SPAF_RS03120 SM00450 Rhodanese Homology Domain SPAF_RS03130 SM00838 Elongation factor G C-terminus SPAF_RS03155 SM00842 Cell division protein FtsA SPAF_RS03160 SM00864 Tubulin/FtsZ family, GTPase domain SPAF_RS03160 SM00865 Tubulin/FtsZ family, C-terminal domain SPAF_RS03180 SM00363 S4 RNA-binding domain SPAF_RS03205 SM00382 ATPases associated with a variety of cellular activities SPAF_RS03205 SM01086 C-terminal, D2-small domain, of ClpB protein SPAF_RS03230 SM00354 helix_turn _helix lactose operon repressor SPAF_RS03250 SM00640 Glycosyl hydrolases family 32 SPAF_RS03275 SM00363 S4 RNA-binding domain SPAF_RS03300 SM00411 bacterial (prokaryotic) histone like domain SPAF_RS03310 SM00855 Phosphoglycerate mutase family SPAF_RS03350 SM00448 cheY-homologous receiver domain SPAF_RS03350 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS03355 SM00387 Histidine kinase-like ATPases SPAF_RS03360 SM00382 ATPases associated with a variety of cellular activities SPAF_RS03395 SM00487 DEAD-like helicases superfamily SPAF_RS03425 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS03480 SM00382 ATPases associated with a variety of cellular activities SPAF_RS03525 SM00382 ATPases associated with a variety of cellular activities SPAF_RS03540 SM00860 SMI1 / KNR4 family SPAF_RS03560 SM01022 SPAF_RS03560 SPAF_RS03585 SM00478 endonuclease III SPAF_RS03620 SM00493 SPAF_RS03620 SPAF_RS03675 SM00487 DEAD-like helicases superfamily SPAF_RS03675 SM00490 helicase superfamily c-terminal domain SPAF_RS03700 SM00563 Phosphate acyltransferases SPAF_RS03705 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPAF_RS03710 SM00849 Metallo-beta-lactamase superfamily SPAF_RS03740 SM00100 Cyclic nucleotide-monophosphate binding domain SPAF_RS03740 SM00419 helix_turn_helix, cAMP Regulatory protein SPAF_RS03825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPAF_RS03855 SM00642 Alpha-amylase domain SPAF_RS03875 SM01208 SPAF_RS03875 SPAF_RS03910 SM00382 ATPases associated with a variety of cellular activities SPAF_RS03935 SM00892 DNA/RNA non-specific endonuclease SPAF_RS03945 SM00382 ATPases associated with a variety of cellular activities SPAF_RS03955 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS04045 SM00400 zinc finger SPAF_RS04045 SM00493 SPAF_RS04045 SPAF_RS04060 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04075 SM00481 DNA polymerase alpha chain like domain SPAF_RS04100 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04105 SM00062 Bacterial periplasmic substrate-binding proteins SPAF_RS04145 SM00904 Riboflavin kinase SPAF_RS04185 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04190 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04210 SM00448 cheY-homologous receiver domain SPAF_RS04210 SM00850 LytTr DNA-binding domain SPAF_RS04215 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04235 SM00448 cheY-homologous receiver domain SPAF_RS04235 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS04240 SM00387 Histidine kinase-like ATPases SPAF_RS04240 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS04255 SM00487 DEAD-like helicases superfamily SPAF_RS04255 SM00490 helicase superfamily c-terminal domain SPAF_RS04315 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04390 SM00116 Domain in cystathionine beta-synthase and other proteins. SPAF_RS04405 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS04410 SM00873 B3/4 domain SPAF_RS04425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPAF_RS04425 SM00292 breast cancer carboxy-terminal domain SPAF_RS04425 SM00532 Ligase N family SPAF_RS04430 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPAF_RS04435 SM00642 Alpha-amylase domain SPAF_RS04500 SM00900 SPAF_RS04500 SPAF_RS04580 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04600 SM00382 ATPases associated with a variety of cellular activities SPAF_RS04605 SM00422 helix_turn_helix, mercury resistance SPAF_RS04635 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS04640 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS04655 SM00892 DNA/RNA non-specific endonuclease SPAF_RS04665 SM00642 Alpha-amylase domain SPAF_RS04680 SM00422 helix_turn_helix, mercury resistance SPAF_RS04715 SM00248 ankyrin repeats SPAF_RS04775 SM00830 Chorismate mutase type II SPAF_RS04900 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPAF_RS04915 SM00986 Uracil DNA glycosylase superfamily SPAF_RS04915 SM00987 UreE urease accessory protein, C-terminal domain SPAF_RS04940 SM00917 LeuA allosteric (dimerisation) domain SPAF_RS04945 SM01329 SPAF_RS04945 SPAF_RS04970 SM01207 SPAF_RS04970 SPAF_RS04975 SM00387 Histidine kinase-like ATPases SPAF_RS04975 SM00433 TopoisomeraseII SPAF_RS04985 SM00434 DNA Topoisomerase IV SPAF_RS05010 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS05030 SM00434 DNA Topoisomerase IV SPAF_RS05055 SM00881 CoA binding domain SPAF_RS05075 SM01400 SPAF_RS05075 SPAF_RS05080 SM01118 SPAF_RS05080 SPAF_RS05085 SM00954 Region found in RelA / SpoT proteins SPAF_RS05115 SM00478 endonuclease III SPAF_RS05235 SM01240 SPAF_RS05235 SPAF_RS05270 SM00937 SPAF_RS05270 SPAF_RS05310 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPAF_RS05310 SM00866 SPAF_RS05310 SPAF_RS05325 SM00849 Metallo-beta-lactamase superfamily SPAF_RS05345 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05345 SM00962 SRP54-type protein, GTPase domain SPAF_RS05345 SM00963 SRP54-type protein, helical bundle domain SPAF_RS05395 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05420 SM00861 Transketolase, pyrimidine binding domain SPAF_RS05460 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPAF_RS05460 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPAF_RS05460 SM00493 SPAF_RS05460 SPAF_RS05490 SM01130 SPAF_RS05490 SPAF_RS05495 SM00859 Semialdehyde dehydrogenase, NAD binding domain SPAF_RS05515 SM00155 Phospholipase D. Active site motifs. SPAF_RS05525 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05530 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05560 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS05575 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05580 SM00448 cheY-homologous receiver domain SPAF_RS05580 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS05585 SM00387 Histidine kinase-like ATPases SPAF_RS05585 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS05615 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS05655 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05665 SM00448 cheY-homologous receiver domain SPAF_RS05665 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS05670 SM00387 Histidine kinase-like ATPases SPAF_RS05670 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS05685 SM00487 DEAD-like helicases superfamily SPAF_RS05685 SM00490 helicase superfamily c-terminal domain SPAF_RS05700 SM00387 Histidine kinase-like ATPases SPAF_RS05700 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS05705 SM00448 cheY-homologous receiver domain SPAF_RS05705 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS05720 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05825 SM00047 Lysozyme subfamily 2 SPAF_RS05835 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05835 SM00994 ClpX C4-type zinc finger SPAF_RS05835 SM01086 C-terminal, D2-small domain, of ClpB protein SPAF_RS05865 SM00382 ATPases associated with a variety of cellular activities SPAF_RS05910 SM00420 helix_turn_helix, Deoxyribose operon repressor SPAF_RS05910 SM01134 SPAF_RS05910 SPAF_RS05955 SM00838 Elongation factor G C-terminus SPAF_RS05965 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS05980 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPAF_RS05985 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SPAF_RS06060 SM00487 DEAD-like helicases superfamily SPAF_RS06060 SM00490 helicase superfamily c-terminal domain SPAF_RS06070 SM00062 Bacterial periplasmic substrate-binding proteins SPAF_RS06070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPAF_RS06075 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06080 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06085 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06115 SM00347 helix_turn_helix multiple antibiotic resistance protein SPAF_RS06120 SM01321 SPAF_RS06120 SPAF_RS06140 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPAF_RS06150 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06155 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06185 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06200 SM01133 SPAF_RS06200 SPAF_RS06205 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SPAF_RS06245 SM00450 Rhodanese Homology Domain SPAF_RS06255 SM00986 Uracil DNA glycosylase superfamily SPAF_RS06255 SM00987 UreE urease accessory protein, C-terminal domain SPAF_RS06275 SM00465 GIY-YIG type nucleases (URI domain) SPAF_RS06305 SM00729 Elongator protein 3, MiaB family, Radical SAM SPAF_RS06310 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06325 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SPAF_RS06330 SM00363 S4 RNA-binding domain SPAF_RS06360 SM01061 CAT RNA binding domain SPAF_RS06365 SM01133 SPAF_RS06365 SPAF_RS06400 SM00420 helix_turn_helix, Deoxyribose operon repressor SPAF_RS06400 SM01134 SPAF_RS06400 SPAF_RS06430 SM00116 Domain in cystathionine beta-synthase and other proteins. SPAF_RS06430 SM00420 helix_turn_helix, Deoxyribose operon repressor SPAF_RS06440 SM00981 SPAF_RS06440 SPAF_RS06490 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPAF_RS06540 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06550 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPAF_RS06555 SM00642 Alpha-amylase domain SPAF_RS06565 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPAF_RS06630 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06665 SM00642 Alpha-amylase domain SPAF_RS06690 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS06695 SM00354 helix_turn _helix lactose operon repressor SPAF_RS06710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPAF_RS06710 SM00387 Histidine kinase-like ATPases SPAF_RS06710 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS06715 SM00448 cheY-homologous receiver domain SPAF_RS06715 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS06725 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06760 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS06760 SM00448 cheY-homologous receiver domain SPAF_RS06770 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06795 SM00900 SPAF_RS06795 SPAF_RS06810 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS06965 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06970 SM00382 ATPases associated with a variety of cellular activities SPAF_RS06990 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07030 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07040 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS07055 SM00899 SPAF_RS07055 SPAF_RS07065 SM00873 B3/4 domain SPAF_RS07065 SM00874 tRNA synthetase B5 domain SPAF_RS07065 SM00896 Ferredoxin-fold anticodon binding domain SPAF_RS07100 SM00028 Tetratricopeptide repeats SPAF_RS07120 SM01192 SPAF_RS07120 SPAF_RS07120 SM01193 SPAF_RS07120 SPAF_RS07145 SM00387 Histidine kinase-like ATPases SPAF_RS07145 SM00433 TopoisomeraseII SPAF_RS07170 SM00479 SPAF_RS07170 SPAF_RS07170 SM00487 DEAD-like helicases superfamily SPAF_RS07170 SM00491 SPAF_RS07170 SPAF_RS07175 SM00849 Metallo-beta-lactamase superfamily SPAF_RS07185 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07190 SM00937 SPAF_RS07190 SPAF_RS07200 SM00831 Cation transporter/ATPase, N-terminus SPAF_RS07210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPAF_RS07260 SM00855 Phosphoglycerate mutase family SPAF_RS07275 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07325 SM01321 SPAF_RS07325 SPAF_RS07365 SM00731 SprT homologues. SPAF_RS07370 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS07370 SM00732 Likely ribonuclease with RNase H fold. SPAF_RS07390 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07390 SM00962 SRP54-type protein, GTPase domain SPAF_RS07390 SM00963 SRP54-type protein, helical bundle domain SPAF_RS07405 SM00968 SMC proteins Flexible Hinge Domain SPAF_RS07410 SM00358 Double-stranded RNA binding motif SPAF_RS07410 SM00535 Ribonuclease III family SPAF_RS07420 SM00849 Metallo-beta-lactamase superfamily SPAF_RS07425 SM00091 PAS domain SPAF_RS07425 SM00387 Histidine kinase-like ATPases SPAF_RS07425 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS07430 SM00448 cheY-homologous receiver domain SPAF_RS07430 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS07435 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPAF_RS07450 SM00354 helix_turn _helix lactose operon repressor SPAF_RS07490 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07525 SM00316 Ribosomal protein S1-like RNA-binding domain SPAF_RS07525 SM00955 SPAF_RS07525 SPAF_RS07545 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SPAF_RS07545 SM01232 SPAF_RS07545 SPAF_RS07565 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07570 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07585 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SPAF_RS07585 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SPAF_RS07620 SM00649 Ribosomal protein L11/L12 SPAF_RS07640 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07640 SM00843 SPAF_RS07640 SPAF_RS07665 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07710 SM00116 Domain in cystathionine beta-synthase and other proteins. SPAF_RS07715 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07720 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07755 SM00831 Cation transporter/ATPase, N-terminus SPAF_RS07790 SM01131 SPAF_RS07790 SPAF_RS07805 SM00642 Alpha-amylase domain SPAF_RS07815 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPAF_RS07815 SM00866 SPAF_RS07815 SPAF_RS07820 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07835 SM01091 Transporter associated domain SPAF_RS07850 SM00382 ATPases associated with a variety of cellular activities SPAF_RS07890 SM00729 Elongator protein 3, MiaB family, Radical SAM SPAF_RS07895 SM00014 Acid phosphatase homologues SPAF_RS07920 SM01234 SPAF_RS07920 SPAF_RS07925 SM00363 S4 RNA-binding domain SPAF_RS07945 SM00116 Domain in cystathionine beta-synthase and other proteins. SPAF_RS07985 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPAF_RS08035 SM00487 DEAD-like helicases superfamily SPAF_RS08035 SM00490 helicase superfamily c-terminal domain SPAF_RS08075 SM00448 cheY-homologous receiver domain SPAF_RS08075 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS08080 SM01350 SPAF_RS08080 SPAF_RS08085 SM00244 prohibitin homologues SPAF_RS08140 SM00382 ATPases associated with a variety of cellular activities SPAF_RS08155 SM00450 Rhodanese Homology Domain SPAF_RS08170 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS08195 SM00382 ATPases associated with a variety of cellular activities SPAF_RS08195 SM00930 SPAF_RS08195 SPAF_RS08210 SM00062 Bacterial periplasmic substrate-binding proteins SPAF_RS08230 SM00829 Enoylreductase SPAF_RS08240 SM00845 GatB domain SPAF_RS08280 SM00870 SPAF_RS08280 SPAF_RS08285 SM00487 DEAD-like helicases superfamily SPAF_RS08285 SM00490 helicase superfamily c-terminal domain SPAF_RS08290 SM01005 Alanine racemase, C-terminal domain SPAF_RS08305 SM00957 SecA DEAD-like domain SPAF_RS08305 SM00958 SecA preprotein cross-linking domain SPAF_RS08315 SM00422 helix_turn_helix, mercury resistance SPAF_RS08335 SM00014 Acid phosphatase homologues SPAF_RS08355 SM00640 Glycosyl hydrolases family 32 SPAF_RS08360 SM00354 helix_turn _helix lactose operon repressor SPAF_RS08375 SM00841 Elongation factor P, C-terminal SPAF_RS08375 SM01185 SPAF_RS08375 SPAF_RS08385 SM00382 ATPases associated with a variety of cellular activities SPAF_RS08405 SM01126 SPAF_RS08405 SPAF_RS08495 SM01221 SPAF_RS08495 SPAF_RS08495 SM01222 SPAF_RS08495 SPAF_RS08530 SM01043 Bacterial transcriptional activator domain SPAF_RS08545 SM00642 Alpha-amylase domain SPAF_RS08580 SM00420 helix_turn_helix, Deoxyribose operon repressor SPAF_RS08580 SM01134 SPAF_RS08580 SPAF_RS08655 SM00382 ATPases associated with a variety of cellular activities SPAF_RS08660 SM00382 ATPases associated with a variety of cellular activities SPAF_RS08690 SM00382 ATPases associated with a variety of cellular activities SPAF_RS08700 SM00387 Histidine kinase-like ATPases SPAF_RS08700 SM00388 His Kinase A (phosphoacceptor) domain SPAF_RS08705 SM00448 cheY-homologous receiver domain SPAF_RS08705 SM00862 Transcriptional regulatory protein, C terminal SPAF_RS08730 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS08760 SM01007 Class II Aldolase and Adducin N-terminal domain SPAF_RS08775 SM00342 helix_turn_helix, arabinose operon control protein SPAF_RS08825 SM00534 ATPase domain of DNA mismatch repair MUTS family SPAF_RS08830 SM00854 Bacterial capsule synthesis protein PGA_cap SPAF_RS08850 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SPAF_RS08890 SM00463 Small MutS-related domain SPAF_RS08890 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPAF_RS08890 SM00534 ATPase domain of DNA mismatch repair MUTS family SPAF_RS09000 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPAF_RS09000 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPAF_RS09010 SM00479 SPAF_RS09010 SPAF_RS09100 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS09125 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS09145 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09175 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS09195 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09205 SM00530 Helix-turn-helix XRE-family like proteins SPAF_RS09295 SM00849 Metallo-beta-lactamase superfamily SPAF_RS09300 SM01230 SPAF_RS09300 SPAF_RS09305 SM00422 helix_turn_helix, mercury resistance SPAF_RS09330 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPAF_RS09335 SM00838 Elongation factor G C-terminus SPAF_RS09335 SM00889 Elongation factor G, domain IV SPAF_RS09370 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SPAF_RS09400 SM00650 Ribosomal RNA adenine dimethylases SPAF_RS09425 SM00393 Putative single-stranded nucleic acids-binding domain SPAF_RS09425 SM01245 SPAF_RS09425 SPAF_RS09465 SM00957 SecA DEAD-like domain SPAF_RS09465 SM00958 SecA preprotein cross-linking domain SPAF_RS09525 SM00849 Metallo-beta-lactamase superfamily SPAF_RS09535 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09550 SM00947 Carbonic anhydrase SPAF_RS09555 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09560 SM00855 Phosphoglycerate mutase family SPAF_RS09630 SM01321 SPAF_RS09630 SPAF_RS09660 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09675 SM00788 Adenylosuccinate synthetase SPAF_RS09730 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09730 SM01086 C-terminal, D2-small domain, of ClpB protein SPAF_RS09740 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SPAF_RS09740 SM00812 Alpha-L-fucosidase SPAF_RS09740 SM01208 SPAF_RS09740 SPAF_RS09745 SM01208 SPAF_RS09745 SPAF_RS09790 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SPAF_RS09790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPAF_RS09925 SM00155 Phospholipase D. Active site motifs. SPAF_RS09945 SM00732 Likely ribonuclease with RNase H fold. SPAF_RS09965 SM00382 ATPases associated with a variety of cellular activities SPAF_RS09970 SM00852 Probable molybdopterin binding domain SPAF_RS09980 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPAF_RS09985 SM00853 MutL C terminal dimerisation domain SPAF_RS09985 SM01340 SPAF_RS09985 SPAF_RS09990 SM00850 LytTr DNA-binding domain SPAF_RS10000 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPAF_RS10000 SM00534 ATPase domain of DNA mismatch repair MUTS family SPAF_RS10010 SM00836 DALR anticodon binding domain SPAF_RS10010 SM01016 Arginyl tRNA synthetase N terminal dom SPAF_RS10060 SM00354 helix_turn _helix lactose operon repressor SPAF_RS10065 SM00642 Alpha-amylase domain SPAF_RS10145 SM00363 S4 RNA-binding domain SPAF_RS10145 SM01390 SPAF_RS10145 SPAF_RS10150 SM00382 ATPases associated with a variety of cellular activities SPAF_RS10185 SM01228 SPAF_RS10185 SPAF_RS10200 SM00257 Lysin motif SPAF_RS10220 SM00257 Lysin motif SPAF_RS10230 SM00382 ATPases associated with a variety of cellular activities SPAF_RS10235 SM00382 ATPases associated with a variety of cellular activities SPAF_RS10270 SM00116 Domain in cystathionine beta-synthase and other proteins. SPAF_RS10270 SM01240 SPAF_RS10270 SPAF_RS10280 SM00382 ATPases associated with a variety of cellular activities SPAF_RS10300 SM00448 cheY-homologous receiver domain SPAF_RS10300 SM00850 LytTr DNA-binding domain SPAF_RS10305 SM00387 Histidine kinase-like ATPases SPAF_RS10320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPAF_RS10325 SM00470 ParB-like nuclease domain