SPSF3K_RS00005 SM00470 ParB-like nuclease domain SPSF3K_RS00010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPSF3K_RS00040 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00055 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSF3K_RS00055 SM01240 SPSF3K_RS00055 SPSF3K_RS00090 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00095 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00135 SM01228 SPSF3K_RS00135 SPSF3K_RS00160 SM00363 S4 RNA-binding domain SPSF3K_RS00160 SM01390 SPSF3K_RS00160 SPSF3K_RS00210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPSF3K_RS00250 SM00882 Coenzyme A transferase SPSF3K_RS00260 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS00285 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS00330 SM00836 DALR anticodon binding domain SPSF3K_RS00330 SM01016 Arginyl tRNA synthetase N terminal dom SPSF3K_RS00345 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPSF3K_RS00345 SM00534 ATPase domain of DNA mismatch repair MUTS family SPSF3K_RS00350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPSF3K_RS00445 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS00455 SM00853 MutL C terminal dimerisation domain SPSF3K_RS00455 SM01340 SPSF3K_RS00455 SPSF3K_RS00465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSF3K_RS00475 SM00852 Probable molybdopterin binding domain SPSF3K_RS00480 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00495 SM00732 Likely ribonuclease with RNase H fold. SPSF3K_RS00545 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS00545 SM00866 SPSF3K_RS00545 SPSF3K_RS00555 SM00642 Alpha-amylase domain SPSF3K_RS00580 SM00861 Transketolase, pyrimidine binding domain SPSF3K_RS00615 SM00892 DNA/RNA non-specific endonuclease SPSF3K_RS00630 SM00903 Flavin reductase like domain SPSF3K_RS00655 SM00357 Cold shock protein domain SPSF3K_RS00665 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00665 SM01086 C-terminal, D2-small domain, of ClpB protein SPSF3K_RS00670 SM00883 Chaperonin 10 Kd subunit SPSF3K_RS00725 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SPSF3K_RS00725 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPSF3K_RS00760 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPSF3K_RS00770 SM01007 Class II Aldolase and Adducin N-terminal domain SPSF3K_RS00785 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPSF3K_RS00790 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00800 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SPSF3K_RS00800 SM00474 3'-5' exonuclease SPSF3K_RS00800 SM00475 5'-3' exonuclease SPSF3K_RS00800 SM00482 DNA polymerase A domain SPSF3K_RS00805 SM00881 CoA binding domain SPSF3K_RS00835 SM00849 Metallo-beta-lactamase superfamily SPSF3K_RS00850 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS00905 SM00984 UDP binding domain SPSF3K_RS00935 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSF3K_RS00940 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00945 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00970 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS00975 SM00947 Carbonic anhydrase SPSF3K_RS01010 SM00448 cheY-homologous receiver domain SPSF3K_RS01010 SM00850 LytTr DNA-binding domain SPSF3K_RS01035 SM00393 Putative single-stranded nucleic acids-binding domain SPSF3K_RS01035 SM01245 SPSF3K_RS01035 SPSF3K_RS01045 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01055 SM00850 LytTr DNA-binding domain SPSF3K_RS01095 SM01130 SPSF3K_RS01095 SPSF3K_RS01125 SM00493 SPSF3K_RS01125 SPSF3K_RS01130 SM00650 Ribosomal RNA adenine dimethylases SPSF3K_RS01160 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SPSF3K_RS01200 SM00838 Elongation factor G C-terminus SPSF3K_RS01200 SM00889 Elongation factor G, domain IV SPSF3K_RS01205 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPSF3K_RS01220 SM00422 helix_turn_helix, mercury resistance SPSF3K_RS01225 SM01230 SPSF3K_RS01225 SPSF3K_RS01245 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01250 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01255 SM00849 Metallo-beta-lactamase superfamily SPSF3K_RS01295 SM00479 SPSF3K_RS01295 SPSF3K_RS01305 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS01370 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS01405 SM00764 Citrate lyase ligase C-terminal domain SPSF3K_RS01420 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS01420 SM00895 SPSF3K_RS01420 SPSF3K_RS01485 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS01505 SM00640 Glycosyl hydrolases family 32 SPSF3K_RS01515 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS01520 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS01530 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPSF3K_RS01530 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPSF3K_RS01580 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01605 SM00463 Small MutS-related domain SPSF3K_RS01605 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPSF3K_RS01605 SM00534 ATPase domain of DNA mismatch repair MUTS family SPSF3K_RS01620 SM00478 endonuclease III SPSF3K_RS01650 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01665 SM00841 Elongation factor P, C-terminal SPSF3K_RS01665 SM01185 SPSF3K_RS01665 SPSF3K_RS01680 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS01685 SM00640 Glycosyl hydrolases family 32 SPSF3K_RS01725 SM00957 SecA DEAD-like domain SPSF3K_RS01725 SM00958 SecA preprotein cross-linking domain SPSF3K_RS01735 SM01005 Alanine racemase, C-terminal domain SPSF3K_RS01740 SM00487 DEAD-like helicases superfamily SPSF3K_RS01740 SM00490 helicase superfamily c-terminal domain SPSF3K_RS01750 SM00870 SPSF3K_RS01750 SPSF3K_RS01785 SM00450 Rhodanese Homology Domain SPSF3K_RS01790 SM00450 Rhodanese Homology Domain SPSF3K_RS01795 SM00450 Rhodanese Homology Domain SPSF3K_RS01875 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01880 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01895 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSF3K_RS01900 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS01910 SM00363 S4 RNA-binding domain SPSF3K_RS01925 SM00663 RNA polymerase I subunit A N-terminus SPSF3K_RS01980 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS02040 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02085 SM00788 Adenylosuccinate synthetase SPSF3K_RS02100 SM00420 helix_turn_helix, Deoxyribose operon repressor SPSF3K_RS02100 SM01134 SPSF3K_RS02100 SPSF3K_RS02160 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02170 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02185 SM00098 Alkaline phosphatase homologues SPSF3K_RS02230 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS02315 SM00422 helix_turn_helix, mercury resistance SPSF3K_RS02355 SM00422 helix_turn_helix, mercury resistance SPSF3K_RS02380 SM00919 Malic enzyme, NAD binding domain SPSF3K_RS02380 SM01274 SPSF3K_RS02380 SPSF3K_RS02405 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02415 SM00357 Cold shock protein domain SPSF3K_RS02450 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS02485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSF3K_RS02485 SM00954 Region found in RelA / SpoT proteins SPSF3K_RS02510 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02515 SM00642 Alpha-amylase domain SPSF3K_RS02525 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS02550 SM01323 SPSF3K_RS02550 SPSF3K_RS02580 SM00479 SPSF3K_RS02580 SPSF3K_RS02580 SM00481 DNA polymerase alpha chain like domain SPSF3K_RS02585 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSF3K_RS02625 SM01387 SPSF3K_RS02625 SPSF3K_RS02630 SM00316 Ribosomal protein S1-like RNA-binding domain SPSF3K_RS02630 SM00322 K homology RNA-binding domain SPSF3K_RS02645 SM00840 SPSF3K_RS02645 SPSF3K_RS02660 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPSF3K_RS02695 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS02755 SM00100 Cyclic nucleotide-monophosphate binding domain SPSF3K_RS02755 SM00419 helix_turn_helix, cAMP Regulatory protein SPSF3K_RS02830 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SPSF3K_RS02925 SM00387 Histidine kinase-like ATPases SPSF3K_RS02930 SM00448 cheY-homologous receiver domain SPSF3K_RS02930 SM00850 LytTr DNA-binding domain SPSF3K_RS02975 SM01120 SPSF3K_RS02975 SPSF3K_RS02975 SM01121 SPSF3K_RS02975 SPSF3K_RS02980 SM00244 prohibitin homologues SPSF3K_RS02990 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS02995 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS03020 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03050 SM00936 Penicillin-binding protein 5, C-terminal domain SPSF3K_RS03055 SM00936 Penicillin-binding protein 5, C-terminal domain SPSF3K_RS03075 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03080 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03130 SM01103 SPSF3K_RS03130 SPSF3K_RS03140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSF3K_RS03165 SM00422 helix_turn_helix, mercury resistance SPSF3K_RS03180 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS03195 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03195 SM00930 SPSF3K_RS03195 SPSF3K_RS03235 SM00448 cheY-homologous receiver domain SPSF3K_RS03235 SM00862 Transcriptional regulatory protein, C terminal SPSF3K_RS03265 SM00487 DEAD-like helicases superfamily SPSF3K_RS03265 SM00490 helicase superfamily c-terminal domain SPSF3K_RS03305 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPSF3K_RS03365 SM00363 S4 RNA-binding domain SPSF3K_RS03370 SM01234 SPSF3K_RS03370 SPSF3K_RS03385 SM00014 Acid phosphatase homologues SPSF3K_RS03455 SM00885 D5 N terminal like SPSF3K_RS03460 SM00942 Primase C terminal 1 (PriCT-1) SPSF3K_RS03490 SM01040 BRO family, N-terminal domain SPSF3K_RS03510 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSF3K_RS03515 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03530 SM01091 Transporter associated domain SPSF3K_RS03540 SM01131 SPSF3K_RS03540 SPSF3K_RS03570 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03620 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03625 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03630 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSF3K_RS03720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPSF3K_RS03795 SM00529 Helix-turn-helix diphteria tox regulatory element SPSF3K_RS03805 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03820 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03820 SM00843 SPSF3K_RS03820 SPSF3K_RS03835 SM00649 Ribosomal protein L11/L12 SPSF3K_RS03890 SM00986 Uracil DNA glycosylase superfamily SPSF3K_RS03890 SM00987 UreE urease accessory protein, C-terminal domain SPSF3K_RS03935 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS03940 SM00448 cheY-homologous receiver domain SPSF3K_RS03940 SM00850 LytTr DNA-binding domain SPSF3K_RS03950 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SPSF3K_RS03950 SM01232 SPSF3K_RS03950 SPSF3K_RS03985 SM00316 Ribosomal protein S1-like RNA-binding domain SPSF3K_RS03985 SM00955 SPSF3K_RS03985 SPSF3K_RS04060 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS04065 SM00642 Alpha-amylase domain SPSF3K_RS04080 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPSF3K_RS04105 SM01120 SPSF3K_RS04105 SPSF3K_RS04135 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS04140 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS04145 SM00448 cheY-homologous receiver domain SPSF3K_RS04145 SM00862 Transcriptional regulatory protein, C terminal SPSF3K_RS04150 SM00091 PAS domain SPSF3K_RS04150 SM00387 Histidine kinase-like ATPases SPSF3K_RS04150 SM00388 His Kinase A (phosphoacceptor) domain SPSF3K_RS04155 SM00849 Metallo-beta-lactamase superfamily SPSF3K_RS04160 SM00358 Double-stranded RNA binding motif SPSF3K_RS04160 SM00535 Ribonuclease III family SPSF3K_RS04165 SM00968 SMC proteins Flexible Hinge Domain SPSF3K_RS04180 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS04180 SM00962 SRP54-type protein, GTPase domain SPSF3K_RS04180 SM00963 SRP54-type protein, helical bundle domain SPSF3K_RS04210 SM00448 cheY-homologous receiver domain SPSF3K_RS04210 SM00862 Transcriptional regulatory protein, C terminal SPSF3K_RS04215 SM00387 Histidine kinase-like ATPases SPSF3K_RS04215 SM00388 His Kinase A (phosphoacceptor) domain SPSF3K_RS04235 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS04245 SM00316 Ribosomal protein S1-like RNA-binding domain SPSF3K_RS04245 SM00732 Likely ribonuclease with RNase H fold. SPSF3K_RS04250 SM00731 SprT homologues. SPSF3K_RS04335 SM01221 SPSF3K_RS04335 SPSF3K_RS04335 SM01222 SPSF3K_RS04335 SPSF3K_RS04370 SM01043 Bacterial transcriptional activator domain SPSF3K_RS04385 SM00855 Phosphoglycerate mutase family SPSF3K_RS04460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSF3K_RS04480 SM00831 Cation transporter/ATPase, N-terminus SPSF3K_RS04520 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS04530 SM00849 Metallo-beta-lactamase superfamily SPSF3K_RS04535 SM00479 SPSF3K_RS04535 SPSF3K_RS04535 SM00491 SPSF3K_RS04535 SPSF3K_RS04580 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS04580 SM00866 SPSF3K_RS04580 SPSF3K_RS04595 SM01133 SPSF3K_RS04595 SPSF3K_RS04600 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS04600 SM00866 SPSF3K_RS04600 SPSF3K_RS04665 SM00830 Chorismate mutase type II SPSF3K_RS04700 SM00387 Histidine kinase-like ATPases SPSF3K_RS04700 SM00433 TopoisomeraseII SPSF3K_RS04730 SM01192 SPSF3K_RS04730 SPSF3K_RS04730 SM01193 SPSF3K_RS04730 SPSF3K_RS04835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSF3K_RS04835 SM00292 breast cancer carboxy-terminal domain SPSF3K_RS04835 SM00532 Ligase N family SPSF3K_RS04840 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPSF3K_RS04845 SM00642 Alpha-amylase domain SPSF3K_RS04850 SM00642 Alpha-amylase domain SPSF3K_RS04910 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS04935 SM00892 DNA/RNA non-specific endonuclease SPSF3K_RS04950 SM00873 B3/4 domain SPSF3K_RS04950 SM00874 tRNA synthetase B5 domain SPSF3K_RS04950 SM00896 Ferredoxin-fold anticodon binding domain SPSF3K_RS04970 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS04995 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS04995 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPSF3K_RS05010 SM00400 zinc finger SPSF3K_RS05010 SM00493 SPSF3K_RS05010 SPSF3K_RS05045 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05080 SM00646 SPSF3K_RS05080 SPSF3K_RS05100 SM00257 Lysin motif SPSF3K_RS05170 SM00981 SPSF3K_RS05170 SPSF3K_RS05175 SM00854 Bacterial capsule synthesis protein PGA_cap SPSF3K_RS05205 SM00363 S4 RNA-binding domain SPSF3K_RS05225 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SPSF3K_RS05230 SM00851 MGS-like domain SPSF3K_RS05230 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPSF3K_RS05230 SM01209 SPSF3K_RS05230 SPSF3K_RS05245 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05315 SM00420 helix_turn_helix, Deoxyribose operon repressor SPSF3K_RS05315 SM01134 SPSF3K_RS05315 SPSF3K_RS05330 SM00047 Lysozyme subfamily 2 SPSF3K_RS05335 SM00047 Lysozyme subfamily 2 SPSF3K_RS05365 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05375 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05380 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05385 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SPSF3K_RS05450 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05450 SM00994 ClpX C4-type zinc finger SPSF3K_RS05450 SM01086 C-terminal, D2-small domain, of ClpB protein SPSF3K_RS05465 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05465 SM01086 C-terminal, D2-small domain, of ClpB protein SPSF3K_RS05565 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPSF3K_RS05565 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSF3K_RS05565 SM00493 SPSF3K_RS05565 SPSF3K_RS05615 SM00487 DEAD-like helicases superfamily SPSF3K_RS05645 SM00342 helix_turn_helix, arabinose operon control protein SPSF3K_RS05645 SM00871 Bacterial transcription activator, effector binding domain SPSF3K_RS05690 SM00857 Resolvase, N terminal domain SPSF3K_RS05705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPSF3K_RS05715 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS05765 SM00100 Cyclic nucleotide-monophosphate binding domain SPSF3K_RS05765 SM00419 helix_turn_helix, cAMP Regulatory protein SPSF3K_RS05795 SM00857 Resolvase, N terminal domain SPSF3K_RS05800 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPSF3K_RS05800 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSF3K_RS05800 SM00493 SPSF3K_RS05800 SPSF3K_RS05815 SM00650 Ribosomal RNA adenine dimethylases SPSF3K_RS05865 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSF3K_RS05880 SM00650 Ribosomal RNA adenine dimethylases SPSF3K_RS05955 SM00420 helix_turn_helix, Deoxyribose operon repressor SPSF3K_RS05955 SM01134 SPSF3K_RS05955 SPSF3K_RS05975 SM01133 SPSF3K_RS05975 SPSF3K_RS05980 SM01061 CAT RNA binding domain SPSF3K_RS06015 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS06065 SM00450 Rhodanese Homology Domain SPSF3K_RS06070 SM00287 Bacterial SH3 domain homologues SPSF3K_RS06105 SM00905 Dihydroneopterin aldolase SPSF3K_RS06120 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS06140 SM00448 cheY-homologous receiver domain SPSF3K_RS06155 SM00919 Malic enzyme, NAD binding domain SPSF3K_RS06155 SM01274 SPSF3K_RS06155 SPSF3K_RS06165 SM01061 CAT RNA binding domain SPSF3K_RS06180 SM00342 helix_turn_helix, arabinose operon control protein SPSF3K_RS06205 SM00855 Phosphoglycerate mutase family SPSF3K_RS06210 SM00855 Phosphoglycerate mutase family SPSF3K_RS06240 SM00881 CoA binding domain SPSF3K_RS06260 SM01400 SPSF3K_RS06260 SPSF3K_RS06265 SM01118 SPSF3K_RS06265 SPSF3K_RS06270 SM00954 Region found in RelA / SpoT proteins SPSF3K_RS06310 SM00829 Enoylreductase SPSF3K_RS06320 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS06335 SM01240 SPSF3K_RS06335 SPSF3K_RS06365 SM00937 SPSF3K_RS06365 SPSF3K_RS06415 SM00434 DNA Topoisomerase IV SPSF3K_RS06460 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS06465 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS06465 SM00866 SPSF3K_RS06465 SPSF3K_RS06590 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS06590 SM00866 SPSF3K_RS06590 SPSF3K_RS06605 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS06605 SM00962 SRP54-type protein, GTPase domain SPSF3K_RS06605 SM00963 SRP54-type protein, helical bundle domain SPSF3K_RS06625 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS06680 SM00829 Enoylreductase SPSF3K_RS06695 SM00900 SPSF3K_RS06695 SPSF3K_RS06755 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SPSF3K_RS06805 SM00387 Histidine kinase-like ATPases SPSF3K_RS06810 SM00448 cheY-homologous receiver domain SPSF3K_RS06810 SM00862 Transcriptional regulatory protein, C terminal SPSF3K_RS06820 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS06860 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPSF3K_RS06860 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSF3K_RS06860 SM00493 SPSF3K_RS06860 SPSF3K_RS06870 SM01266 SPSF3K_RS06870 SPSF3K_RS06885 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSF3K_RS06915 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPSF3K_RS06930 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS06935 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS06945 SM01130 SPSF3K_RS06945 SPSF3K_RS06950 SM00859 Semialdehyde dehydrogenase, NAD binding domain SPSF3K_RS06955 SM00155 Phospholipase D. Active site motifs. SPSF3K_RS07000 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS07015 SM01133 SPSF3K_RS07015 SPSF3K_RS07020 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SPSF3K_RS07040 SM00387 Histidine kinase-like ATPases SPSF3K_RS07040 SM00388 His Kinase A (phosphoacceptor) domain SPSF3K_RS07045 SM00448 cheY-homologous receiver domain SPSF3K_RS07045 SM00862 Transcriptional regulatory protein, C terminal SPSF3K_RS07060 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS07065 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS07100 SM00904 Riboflavin kinase SPSF3K_RS07130 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS07145 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS07210 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS07215 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS07270 SM00481 DNA polymerase alpha chain like domain SPSF3K_RS07275 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS07280 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS07310 SM00644 SPSF3K_RS07310 SPSF3K_RS07415 SM00507 HNH nucleases SPSF3K_RS07435 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS07455 SM00487 DEAD-like helicases superfamily SPSF3K_RS07460 SM00990 SPSF3K_RS07460 SPSF3K_RS07465 SM00885 D5 N terminal like SPSF3K_RS07470 SM00482 DNA polymerase A domain SPSF3K_RS07505 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS07515 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS07570 SM00316 Ribosomal protein S1-like RNA-binding domain SPSF3K_RS07595 SM00434 DNA Topoisomerase IV SPSF3K_RS07600 SM00387 Histidine kinase-like ATPases SPSF3K_RS07600 SM00433 TopoisomeraseII SPSF3K_RS07605 SM01207 SPSF3K_RS07605 SPSF3K_RS07615 SM00986 Uracil DNA glycosylase superfamily SPSF3K_RS07615 SM00987 UreE urease accessory protein, C-terminal domain SPSF3K_RS07625 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS07655 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPSF3K_RS07665 SM00984 UDP binding domain SPSF3K_RS07800 SM00465 GIY-YIG type nucleases (URI domain) SPSF3K_RS07870 SM00422 helix_turn_helix, mercury resistance SPSF3K_RS07875 SM00829 Enoylreductase SPSF3K_RS07910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSF3K_RS07925 SM00838 Elongation factor G C-terminus SPSF3K_RS07935 SM00562 SPSF3K_RS07935 SPSF3K_RS07955 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSF3K_RS08005 SM00861 Transketolase, pyrimidine binding domain SPSF3K_RS08015 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08030 SM00849 Metallo-beta-lactamase superfamily SPSF3K_RS08035 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08065 SM00028 Tetratricopeptide repeats SPSF3K_RS08130 SM00478 endonuclease III SPSF3K_RS08130 SM00525 SPSF3K_RS08130 SPSF3K_RS08190 SM00450 Rhodanese Homology Domain SPSF3K_RS08195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SPSF3K_RS08195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SPSF3K_RS08220 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS08240 SM00642 Alpha-amylase domain SPSF3K_RS08270 SM00487 DEAD-like helicases superfamily SPSF3K_RS08270 SM00490 helicase superfamily c-terminal domain SPSF3K_RS08275 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS08275 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPSF3K_RS08280 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08290 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08330 SM00363 S4 RNA-binding domain SPSF3K_RS08355 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08375 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS08380 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08395 SM00448 cheY-homologous receiver domain SPSF3K_RS08395 SM00862 Transcriptional regulatory protein, C terminal SPSF3K_RS08405 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS08475 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSF3K_RS08475 SM00895 SPSF3K_RS08475 SPSF3K_RS08500 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08520 SM00487 DEAD-like helicases superfamily SPSF3K_RS08520 SM00490 helicase superfamily c-terminal domain SPSF3K_RS08570 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPSF3K_RS08640 SM00363 S4 RNA-binding domain SPSF3K_RS08670 SM00849 Metallo-beta-lactamase superfamily SPSF3K_RS08675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSF3K_RS08680 SM00563 Phosphate acyltransferases SPSF3K_RS08700 SM00487 DEAD-like helicases superfamily SPSF3K_RS08700 SM00490 helicase superfamily c-terminal domain SPSF3K_RS08735 SM00493 SPSF3K_RS08735 SPSF3K_RS08760 SM00855 Phosphoglycerate mutase family SPSF3K_RS08780 SM00411 bacterial (prokaryotic) histone like domain SPSF3K_RS08850 SM00899 SPSF3K_RS08850 SPSF3K_RS08855 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08870 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08870 SM01086 C-terminal, D2-small domain, of ClpB protein SPSF3K_RS08895 SM00363 S4 RNA-binding domain SPSF3K_RS08915 SM00864 Tubulin/FtsZ family, GTPase domain SPSF3K_RS08915 SM00865 Tubulin/FtsZ family, C-terminal domain SPSF3K_RS08920 SM00842 Cell division protein FtsA SPSF3K_RS08945 SM00838 Elongation factor G C-terminus SPSF3K_RS08950 SM00450 Rhodanese Homology Domain SPSF3K_RS08975 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS08980 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09015 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09030 SM00354 helix_turn _helix lactose operon repressor SPSF3K_RS09085 SM00100 Cyclic nucleotide-monophosphate binding domain SPSF3K_RS09085 SM00419 helix_turn_helix, cAMP Regulatory protein SPSF3K_RS09095 SM00873 B3/4 domain SPSF3K_RS09120 SM00507 HNH nucleases SPSF3K_RS09195 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSF3K_RS09205 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSF3K_RS09250 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS09280 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09295 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09315 SM00900 SPSF3K_RS09315 SPSF3K_RS09420 SM00100 Cyclic nucleotide-monophosphate binding domain SPSF3K_RS09420 SM00419 helix_turn_helix, cAMP Regulatory protein SPSF3K_RS09450 SM00986 Uracil DNA glycosylase superfamily SPSF3K_RS09450 SM00987 UreE urease accessory protein, C-terminal domain SPSF3K_RS09455 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09600 SM00487 DEAD-like helicases superfamily SPSF3K_RS09600 SM00490 helicase superfamily c-terminal domain SPSF3K_RS09615 SM00316 Ribosomal protein S1-like RNA-binding domain SPSF3K_RS09625 SM00421 helix_turn_helix, Lux Regulon SPSF3K_RS09625 SM00448 cheY-homologous receiver domain SPSF3K_RS09640 SM00220 Serine/Threonine protein kinases, catalytic domain SPSF3K_RS09640 SM00740 SPSF3K_RS09640 SPSF3K_RS09645 SM00331 Sigma factor PP2C-like phosphatases SPSF3K_RS09645 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SPSF3K_RS09660 SM00487 DEAD-like helicases superfamily SPSF3K_RS09660 SM00490 helicase superfamily c-terminal domain SPSF3K_RS09665 SM01409 SPSF3K_RS09665 SPSF3K_RS09670 SM00072 Guanylate kinase homologues. SPSF3K_RS09675 SM00322 K homology RNA-binding domain SPSF3K_RS09675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSF3K_RS09700 SM00981 SPSF3K_RS09700 SPSF3K_RS09760 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09770 SM00062 Bacterial periplasmic substrate-binding proteins SPSF3K_RS09775 SM00487 DEAD-like helicases superfamily SPSF3K_RS09775 SM00490 helicase superfamily c-terminal domain SPSF3K_RS09785 SM00740 SPSF3K_RS09785 SPSF3K_RS09815 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS09825 SM00861 Transketolase, pyrimidine binding domain SPSF3K_RS09940 SM00173 Ras subfamily of RAS small GTPases SPSF3K_RS09955 SM00322 K homology RNA-binding domain SPSF3K_RS09985 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS10070 SM00878 Biotin carboxylase C-terminal domain SPSF3K_RS10085 SM00825 Beta-ketoacyl synthase SPSF3K_RS10090 SM00822 SPSF3K_RS10090 SPSF3K_RS10095 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SPSF3K_RS10115 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSF3K_RS10125 SM00271 DnaJ molecular chaperone homology domain SPSF3K_RS10145 SM00047 Lysozyme subfamily 2 SPSF3K_RS10155 SM00855 Phosphoglycerate mutase family SPSF3K_RS10195 SM00845 GatB domain SPSF3K_RS10220 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSF3K_RS10270 SM00267 diguanylate cyclase SPSF3K_RS10390 SM00662 RNA polymerases D SPSF3K_RS10410 SM00316 Ribosomal protein S1-like RNA-binding domain SPSF3K_RS10465 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPSF3K_RS10470 SM01374 SPSF3K_RS10470 SPSF3K_RS10490 SM00322 K homology RNA-binding domain SPSF3K_RS10505 SM01382 SPSF3K_RS10505 SPSF3K_RS10505 SM01383 SPSF3K_RS10505 SPSF3K_RS10525 SM01403 SPSF3K_RS10525 SPSF3K_RS10550 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SPSF3K_RS10555 SM00226 Low molecular weight phosphatase family SPSF3K_RS10560 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS10570 SM00998 Adenylosuccinate lyase C-terminus SPSF3K_RS10580 SM01001 AIR carboxylase SPSF3K_RS10585 SM01209 SPSF3K_RS10585 SPSF3K_RS10585 SM01210 SPSF3K_RS10585 SPSF3K_RS10605 SM00798 AICARFT/IMPCHase bienzyme SPSF3K_RS10605 SM00851 MGS-like domain SPSF3K_RS10625 SM01211 SPSF3K_RS10625 SPSF3K_RS10655 SM01400 SPSF3K_RS10655 SPSF3K_RS10850 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS10860 SM00977 TilS substrate C-terminal domain SPSF3K_RS10875 SM00363 S4 RNA-binding domain SPSF3K_RS10885 SM00487 DEAD-like helicases superfamily SPSF3K_RS10885 SM00490 helicase superfamily c-terminal domain SPSF3K_RS10885 SM00982 SPSF3K_RS10885 SPSF3K_RS10885 SM01058 CarD-like/TRCF domain SPSF3K_RS10900 SM00530 Helix-turn-helix XRE-family like proteins SPSF3K_RS10910 SM00480 DNA polymerase III beta subunit SPSF3K_RS10915 SM00382 ATPases associated with a variety of cellular activities SPSF3K_RS10915 SM00760 Bacterial dnaA protein helix-turn-helix domain SPSF3K_RS10985 SM00857 Resolvase, N terminal domain SPSF3K_RS11005 SM00838 Elongation factor G C-terminus SPSF3K_RS11005 SM00889 Elongation factor G, domain IV SPSF3K_RS11065 SM00857 Resolvase, N terminal domain