locus-tag	class	description
SpyM3_1412	COG1705	Flagellar rod assembly protein muramidase FlgJ
SpyM3_1435	COG1783	phage Terminase large subunit
SpyM3_1440	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SpyM3_1443	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SpyM3_1443	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SpyM3_1455	COG1396	sequence-specific DNA binding
SpyM3_1458	COG0582	viral genome integration into host DNA