locus-tag class description L3475_RS00005 PF00308 Bacterial dnaA protein L3475_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix L3475_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain L3475_RS00010 PF02767 DNA polymerase III beta subunit, central domain L3475_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain L3475_RS00150 PF02661 Fic/DOC family L3475_RS00150 PF13784 Fic/DOC family N-terminal L3475_RS00165 PF01446 Replication protein L3475_RS00175 PF02899 Phage integrase, N-terminal SAM-like domain L3475_RS00175 PF00589 Phage integrase family L3475_RS00180 PF06071 Protein of unknown function (DUF933) L3475_RS00180 PF01926 50S ribosome-binding GTPase L3475_RS00185 PF01195 Peptidyl-tRNA hydrolase L3475_RS00190 PF02559 CarD-like/TRCF domain L3475_RS00190 PF00270 DEAD/DEAH box helicase L3475_RS00190 PF00271 Helicase conserved C-terminal domain L3475_RS00190 PF03461 TRCF domain L3475_RS00190 PF17757 UvrB interaction domain L3475_RS00195 PF01479 S4 domain L3475_RS00215 PF01171 PP-loop family L3475_RS00215 PF11734 TilS substrate C-terminal domain L3475_RS00220 PF00156 Phosphoribosyl transferase domain L3475_RS00225 PF01434 Peptidase family M41 L3475_RS00225 PF06480 FtsH Extracellular L3475_RS00225 PF17862 AAA+ lid domain L3475_RS00225 PF00004 ATPase family associated with various cellular activities (AAA) L3475_RS00280 PF00709 Adenylosuccinate synthetase L3475_RS00285 PF14437 MafB19-like deaminase L3475_RS00295 PF00692 dUTPase L3475_RS00310 PF00484 Carbonic anhydrase L3475_RS00320 PF14572 Phosphoribosyl synthetase-associated domain L3475_RS00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L3475_RS00335 PF01367 5'-3' exonuclease, C-terminal SAM fold L3475_RS00335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3475_RS00335 PF00476 DNA polymerase family A L3475_RS00340 PF13380 CoA binding domain L3475_RS00350 PF03601 Conserved hypothetical protein 698 L3475_RS00355 PF00155 Aminotransferase class I and II L3475_RS00360 PF02565 Recombination protein O C terminal L3475_RS00360 PF11967 Recombination protein O N terminal L3475_RS00365 PF02504 Fatty acid synthesis protein L3475_RS00370 PF00550 Phosphopantetheine attachment site L3475_RS00390 PF00664 ABC transporter transmembrane region L3475_RS00390 PF00005 ABC transporter L3475_RS00390 PF03412 Peptidase C39 family L3475_RS00400 PF01259 SAICAR synthetase L3475_RS00405 PF02769 AIR synthase related protein, C-terminal domain L3475_RS00405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L3475_RS00405 PF00586 AIR synthase related protein, N-terminal domain L3475_RS00410 PF00156 Phosphoribosyl transferase domain L3475_RS00415 PF00586 AIR synthase related protein, N-terminal domain L3475_RS00415 PF02769 AIR synthase related protein, C-terminal domain L3475_RS00420 PF00551 Formyl transferase L3475_RS00425 PF04892 VanZ like family L3475_RS00430 PF01808 AICARFT/IMPCHase bienzyme L3475_RS00430 PF02142 MGS-like domain L3475_RS00435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L3475_RS00435 PF02843 Phosphoribosylglycinamide synthetase, C domain L3475_RS00435 PF02844 Phosphoribosylglycinamide synthetase, N domain L3475_RS00445 PF00731 AIR carboxylase L3475_RS00450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3475_RS00450 PF02222 ATP-grasp domain L3475_RS00450 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L3475_RS00460 PF10397 Adenylosuccinate lyase C-terminus L3475_RS00460 PF00206 Lyase L3475_RS00465 PF00746 LPXTG cell wall anchor motif L3475_RS00465 PF04650 YSIRK type signal peptide L3475_RS00465 PF07501 G5 domain L3475_RS00465 PF00728 Glycosyl hydrolase family 20, catalytic domain L3475_RS00470 PF00392 Bacterial regulatory proteins, gntR family L3475_RS00470 PF07702 UTRA domain L3475_RS00475 PF01301 Glycosyl hydrolases family 35 L3475_RS00480 PF03830 PTS system sorbose subfamily IIB component L3475_RS00485 PF03609 PTS system sorbose-specific iic component L3475_RS00490 PF03613 PTS system mannose/fructose/sorbose family IID component L3475_RS00500 PF01380 SIS domain L3475_RS00505 PF01263 Aldose 1-epimerase L3475_RS00510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3475_RS00515 PF02583 Metal-sensitive transcriptional repressor L3475_RS00545 PF02386 Cation transport protein L3475_RS00550 PF02254 TrkA-N domain L3475_RS00550 PF02080 TrkA-C domain L3475_RS00560 PF00535 Glycosyl transferase family 2 L3475_RS00575 PF00486 Transcriptional regulatory protein, C terminal L3475_RS00575 PF00072 Response regulator receiver domain L3475_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS00580 PF00512 His Kinase A (phospho-acceptor) domain L3475_RS00585 PF00163 Ribosomal protein S4/S9 N-terminal domain L3475_RS00585 PF01479 S4 domain L3475_RS00605 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS00610 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS00620 PF12010 Domain of unknown function (DUF3502) L3475_RS00625 PF00581 Rhodanese-like domain L3475_RS00625 PF17773 UPF0176 acylphosphatase like domain L3475_RS00625 PF12368 Rhodanase C-terminal L3475_RS00655 PF00005 ABC transporter L3475_RS00655 PF02687 FtsX-like permease family L3475_RS00655 PF12704 MacB-like periplasmic core domain L3475_RS00675 PF03551 Transcriptional regulator PadR-like family L3475_RS00675 PF10400 Virulence activator alpha C-term L3475_RS00690 PF02719 Polysaccharide biosynthesis protein L3475_RS00700 PF13419 Haloacid dehalogenase-like hydrolase L3475_RS00705 PF03313 Serine dehydratase alpha chain L3475_RS00710 PF03315 Serine dehydratase beta chain L3475_RS00710 PF01842 ACT domain L3475_RS00715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L3475_RS00715 PF01476 LysM domain L3475_RS00735 PF12704 MacB-like periplasmic core domain L3475_RS00735 PF02687 FtsX-like permease family L3475_RS00735 PF00005 ABC transporter L3475_RS00740 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS00750 PF01381 Helix-turn-helix L3475_RS00840 PF00293 NUDIX domain L3475_RS00845 PF13932 GidA associated domain L3475_RS00845 PF01134 Glucose inhibited division protein A L3475_RS00855 PF17770 Ribonuclease J C-terminal domain L3475_RS00855 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L3475_RS00855 PF00753 Metallo-beta-lactamase superfamily L3475_RS00860 PF07288 Protein of unknown function (DUF1447) L3475_RS00880 PF00814 Glycoprotease family L3475_RS00890 PF00814 Glycoprotease family L3475_RS00915 PF13439 Glycosyltransferase Family 4 L3475_RS00915 PF00534 Glycosyl transferases group 1 L3475_RS00920 PF00535 Glycosyl transferase family 2 L3475_RS00925 PF03412 Peptidase C39 family L3475_RS00925 PF00005 ABC transporter L3475_RS00925 PF00664 ABC transporter transmembrane region L3475_RS00945 PF01381 Helix-turn-helix L3475_RS00980 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS00985 PF03180 NLPA lipoprotein L3475_RS00990 PF01546 Peptidase family M20/M25/M40 L3475_RS00990 PF07687 Peptidase dimerisation domain L3475_RS00995 PF09383 NIL domain L3475_RS00995 PF00005 ABC transporter L3475_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS01015 PF02743 Cache domain L3475_RS01015 PF00672 HAMP domain L3475_RS01015 PF06580 Histidine kinase L3475_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS01020 PF12833 Helix-turn-helix domain L3475_RS01020 PF00072 Response regulator receiver domain L3475_RS01030 PF07972 NrdI Flavodoxin like L3475_RS01045 PF04397 LytTr DNA-binding domain L3475_RS01055 PF08676 MutL C terminal dimerisation domain L3475_RS01055 PF01119 DNA mismatch repair protein, C-terminal domain L3475_RS01060 PF00885 6,7-dimethyl-8-ribityllumazine synthase L3475_RS01065 PF00925 GTP cyclohydrolase II L3475_RS01065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L3475_RS01070 PF00677 Lumazine binding domain L3475_RS01075 PF01872 RibD C-terminal domain L3475_RS01075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3475_RS01080 PF01330 RuvA N terminal domain L3475_RS01080 PF07499 RuvA, C-terminal domain L3475_RS01085 PF03352 Methyladenine glycosylase L3475_RS01190 PF17760 UvrA interaction domain L3475_RS01190 PF00005 ABC transporter L3475_RS01190 PF17755 UvrA DNA-binding domain L3475_RS01195 PF00557 Metallopeptidase family M24 L3475_RS01195 PF01321 Creatinase/Prolidase N-terminal domain L3475_RS01200 PF03960 ArsC family L3475_RS01210 PF06135 IreB regulatory phosphoprotein L3475_RS01215 PF03652 Holliday junction resolvase L3475_RS01220 PF06949 Protein of unknown function (DUF1292) L3475_RS01225 PF02875 Mur ligase family, glutamate ligase domain L3475_RS01225 PF08245 Mur ligase middle domain L3475_RS01235 PF13091 PLD-like domain L3475_RS01250 PF03477 ATP cone domain L3475_RS01250 PF13597 Anaerobic ribonucleoside-triphosphate reductase L3475_RS01280 PF00338 Ribosomal protein S10p/S20e L3475_RS01285 PF00297 Ribosomal protein L3 L3475_RS01290 PF00573 Ribosomal protein L4/L1 family L3475_RS01295 PF00276 Ribosomal protein L23 L3475_RS01300 PF03947 Ribosomal Proteins L2, C-terminal domain L3475_RS01300 PF00181 Ribosomal Proteins L2, RNA binding domain L3475_RS01305 PF00203 Ribosomal protein S19 L3475_RS01310 PF00237 Ribosomal protein L22p/L17e L3475_RS01315 PF00189 Ribosomal protein S3, C-terminal domain L3475_RS01315 PF07650 KH domain L3475_RS01320 PF00252 Ribosomal protein L16p/L10e L3475_RS01325 PF00831 Ribosomal L29 protein L3475_RS01330 PF00366 Ribosomal protein S17 L3475_RS01335 PF00238 Ribosomal protein L14p/L23e L3475_RS01340 PF00467 KOW motif L3475_RS01340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L3475_RS01345 PF00281 Ribosomal protein L5 L3475_RS01345 PF00673 ribosomal L5P family C-terminus L3475_RS01350 PF00253 Ribosomal protein S14p/S29e L3475_RS01355 PF00410 Ribosomal protein S8 L3475_RS01360 PF00347 Ribosomal protein L6 L3475_RS01365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L3475_RS01370 PF03719 Ribosomal protein S5, C-terminal domain L3475_RS01370 PF00333 Ribosomal protein S5, N-terminal domain L3475_RS01375 PF00327 Ribosomal protein L30p/L7e L3475_RS01380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L3475_RS01385 PF00344 SecY translocase L3475_RS01395 PF01176 Translation initiation factor 1A / IF-1 L3475_RS01400 PF00444 Ribosomal protein L36 L3475_RS01405 PF00416 Ribosomal protein S13/S18 L3475_RS01410 PF00411 Ribosomal protein S11 L3475_RS01415 PF01000 RNA polymerase Rpb3/RpoA insert domain L3475_RS01415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L3475_RS01415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L3475_RS01420 PF01196 Ribosomal protein L17 L3475_RS01430 PF05167 Uncharacterised ACR (DUF711) L3475_RS01445 PF08402 TOBE domain L3475_RS01445 PF00005 ABC transporter L3475_RS01465 PF04055 Radical SAM superfamily L3475_RS01470 PF08220 DeoR-like helix-turn-helix domain L3475_RS01470 PF00455 DeoR C terminal sensor domain L3475_RS01475 PF04198 Putative sugar-binding domain L3475_RS01475 PF13936 Helix-turn-helix domain L3475_RS01480 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3475_RS01485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS01490 PF02378 Phosphotransferase system, EIIC L3475_RS01495 PF01228 Glycine radical L3475_RS01495 PF02901 Pyruvate formate lyase-like L3475_RS01500 PF00923 Transaldolase/Fructose-6-phosphate aldolase L3475_RS01505 PF00465 Iron-containing alcohol dehydrogenase L3475_RS01510 PF09334 tRNA synthetases class I (M) L3475_RS01510 PF08264 Anticodon-binding domain of tRNA L3475_RS01510 PF00133 tRNA synthetases class I (I, L, M and V) L3475_RS01510 PF13603 Leucyl-tRNA synthetase, Domain 2 L3475_RS01535 PF17864 RuvB AAA lid domain L3475_RS01535 PF05496 Holliday junction DNA helicase RuvB P-loop domain L3475_RS01535 PF05491 RuvB C-terminal winged helix domain L3475_RS01545 PF01255 Putative undecaprenyl diphosphate synthase L3475_RS01555 PF02163 Peptidase family M50 L3475_RS01560 PF03129 Anticodon binding domain L3475_RS01560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3475_RS01560 PF04073 Aminoacyl-tRNA editing domain L3475_RS01565 PF00232 Glycosyl hydrolase family 1 L3475_RS01570 PF01380 SIS domain L3475_RS01580 PF00128 Alpha amylase, catalytic domain L3475_RS01580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3475_RS01580 PF03714 Bacterial pullanase-associated domain L3475_RS01585 PF00164 Ribosomal protein S12/S23 L3475_RS01590 PF00177 Ribosomal protein S7p/S5e L3475_RS01595 PF03764 Elongation factor G, domain IV L3475_RS01595 PF14492 Elongation Factor G, domain II L3475_RS01595 PF00679 Elongation factor G C-terminus L3475_RS01595 PF00009 Elongation factor Tu GTP binding domain L3475_RS01595 PF03144 Elongation factor Tu domain 2 L3475_RS01600 PF14480 DNA polymerase III polC-type N-terminus I L3475_RS01600 PF11490 DNA polymerase III polC-type N-terminus II L3475_RS01600 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3475_RS01600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3475_RS01600 PF02811 PHP domain L3475_RS01600 PF00929 Exonuclease L3475_RS01620 PF02073 Thermophilic metalloprotease (M29) L3475_RS01625 PF04226 Transglycosylase associated protein L3475_RS01630 PF01479 S4 domain L3475_RS01630 PF00849 RNA pseudouridylate synthase L3475_RS01635 PF03051 Peptidase C1-like family L3475_RS01640 PF03613 PTS system mannose/fructose/sorbose family IID component L3475_RS01645 PF03609 PTS system sorbose-specific iic component L3475_RS01650 PF03830 PTS system sorbose subfamily IIB component L3475_RS01650 PF03610 PTS system fructose IIA component L3475_RS01655 PF08240 Alcohol dehydrogenase GroES-like domain L3475_RS01655 PF00107 Zinc-binding dehydrogenase L3475_RS01665 PF00860 Permease family L3475_RS01675 PF00809 Pterin binding enzyme L3475_RS01680 PF02875 Mur ligase family, glutamate ligase domain L3475_RS01680 PF08245 Mur ligase middle domain L3475_RS01685 PF01227 GTP cyclohydrolase I L3475_RS01690 PF02152 Dihydroneopterin aldolase L3475_RS01690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L3475_RS01700 PF00572 Ribosomal protein L13 L3475_RS01705 PF00380 Ribosomal protein S9/S16 L3475_RS01775 PF00232 Glycosyl hydrolase family 1 L3475_RS01780 PF04193 PQ loop repeat L3475_RS01785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS01790 PF08279 HTH domain L3475_RS01790 PF05043 Mga helix-turn-helix domain L3475_RS01790 PF00874 PRD domain L3475_RS01790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3475_RS01795 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3475_RS01805 PF02378 Phosphotransferase system, EIIC L3475_RS01815 PF17137 Domain of unknown function (DUF5110) L3475_RS01815 PF16338 Domain of unknown function (DUF4968) L3475_RS01815 PF01055 Glycosyl hydrolases family 31 L3475_RS01815 PF13802 Galactose mutarotase-like L3475_RS01820 PF00255 Glutathione peroxidase L3475_RS01825 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain L3475_RS01825 PF02278 Polysaccharide lyase family 8, super-sandwich domain L3475_RS01825 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain L3475_RS01845 PF00294 pfkB family carbohydrate kinase L3475_RS01865 PF07470 Glycosyl Hydrolase Family 88 L3475_RS01870 PF03830 PTS system sorbose subfamily IIB component L3475_RS01875 PF03609 PTS system sorbose-specific iic component L3475_RS01880 PF03613 PTS system mannose/fructose/sorbose family IID component L3475_RS01895 PF00356 Bacterial regulatory proteins, lacI family L3475_RS01915 PF01795 MraW methylase family L3475_RS01925 PF00905 Penicillin binding protein transpeptidase domain L3475_RS01925 PF03717 Penicillin-binding Protein dimerisation domain L3475_RS01925 PF03793 PASTA domain L3475_RS01930 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L3475_RS01930 PF00953 Glycosyl transferase family 4 L3475_RS01935 PF00004 ATPase family associated with various cellular activities (AAA) L3475_RS01935 PF17871 AAA lid domain L3475_RS01935 PF07724 AAA domain (Cdc48 subfamily) L3475_RS01935 PF10431 C-terminal, D2-small domain, of ClpB protein L3475_RS01940 PF02664 S-Ribosylhomocysteinase (LuxS) L3475_RS01945 PF08903 Domain of unknown function (DUF1846) L3475_RS01950 PF00128 Alpha amylase, catalytic domain L3475_RS01950 PF16657 Maltogenic Amylase, C-terminal domain L3475_RS01955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3475_RS01975 PF02706 Chain length determinant protein L3475_RS01980 PF13614 AAA domain L3475_RS01985 PF02397 Bacterial sugar transferase L3475_RS01990 PF03808 Glycosyl transferase WecB/TagA/CpsF family L3475_RS01995 PF04991 LicD family L3475_RS02015 PF02350 UDP-N-acetylglucosamine 2-epimerase L3475_RS02020 PF00483 Nucleotidyl transferase L3475_RS02025 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase L3475_RS02030 PF16363 GDP-mannose 4,6 dehydratase L3475_RS02035 PF04321 RmlD substrate binding domain L3475_RS02045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3475_RS02050 PF17974 Galactose-binding domain-like L3475_RS02050 PF18080 Galactose mutarotase-like fold domain L3475_RS02050 PF00754 F5/8 type C domain L3475_RS02050 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal L3475_RS02050 PF17451 Glycosyl hydrolase 101 beta sandwich domain L3475_RS02050 PF04650 YSIRK type signal peptide L3475_RS02050 PF12905 Endo-alpha-N-acetylgalactosaminidase L3475_RS02055 PF00912 Transglycosylase L3475_RS02055 PF00905 Penicillin binding protein transpeptidase domain L3475_RS02060 PF03838 Recombination protein U L3475_RS02065 PF06908 YspA SLOG family L3475_RS02070 PF05103 DivIVA protein L3475_RS02080 PF02926 THUMP domain L3475_RS02080 PF01170 Putative RNA methylase family UPF0020 L3475_RS02085 PF18708 MapZ extracellular C-terminal domain 2 L3475_RS02085 PF18041 MapZ extracellular domain 1 L3475_RS02090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3475_RS02090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain L3475_RS02095 PF00072 Response regulator receiver domain L3475_RS02095 PF00486 Transcriptional regulatory protein, C terminal L3475_RS02130 PF10509 Galactokinase galactose-binding signature L3475_RS02130 PF08544 GHMP kinases C terminal L3475_RS02130 PF00288 GHMP kinases N terminal domain L3475_RS02140 PF08544 GHMP kinases C terminal L3475_RS02140 PF00288 GHMP kinases N terminal domain L3475_RS02145 PF01070 FMN-dependent dehydrogenase L3475_RS02155 PF07730 Histidine kinase L3475_RS02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS02160 PF00072 Response regulator receiver domain L3475_RS02160 PF00196 Bacterial regulatory proteins, luxR family L3475_RS02185 PF00589 Phage integrase family L3475_RS02185 PF14659 Phage integrase, N-terminal SAM-like domain L3475_RS02190 PF05697 Bacterial trigger factor protein (TF) L3475_RS02190 PF05698 Bacterial trigger factor protein (TF) C-terminus L3475_RS02190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L3475_RS02195 PF14490 Helix-hairpin-helix containing domain L3475_RS02195 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain L3475_RS02195 PF13538 UvrD-like helicase C-terminal domain L3475_RS02200 PF10502 Signal peptidase, peptidase S26 L3475_RS02205 PF01351 Ribonuclease HII L3475_RS02205 PF11858 Domain of unknown function (DUF3378) L3475_RS02220 PF01713 Smr domain L3475_RS02220 PF00488 MutS domain V L3475_RS02225 PF01235 Sodium:alanine symporter family L3475_RS02240 PF02403 Seryl-tRNA synthetase N-terminal domain L3475_RS02240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3475_RS02250 PF13840 ACT domain L3475_RS02250 PF00696 Amino acid kinase family L3475_RS02255 PF00378 Enoyl-CoA hydratase/isomerase L3475_RS02260 PF01047 MarR family L3475_RS02265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L3475_RS02265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L3475_RS02270 PF00550 Phosphopantetheine attachment site L3475_RS02275 PF03060 Nitronate monooxygenase L3475_RS02280 PF00698 Acyl transferase domain L3475_RS02290 PF00109 Beta-ketoacyl synthase, N-terminal domain L3475_RS02290 PF02801 Beta-ketoacyl synthase, C-terminal domain L3475_RS02295 PF00364 Biotin-requiring enzyme L3475_RS02300 PF07977 FabA-like domain L3475_RS02305 PF02785 Biotin carboxylase C-terminal domain L3475_RS02305 PF00289 Biotin carboxylase, N-terminal domain L3475_RS02305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3475_RS02310 PF01039 Carboxyl transferase domain L3475_RS02315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L3475_RS02335 PF01029 NusB family L3475_RS02340 PF03780 Asp23 family, cell envelope-related function L3475_RS02345 PF01132 Elongation factor P (EF-P) OB domain L3475_RS02345 PF08207 Elongation factor P (EF-P) KOW-like domain L3475_RS02345 PF09285 Elongation factor P, C-terminal L3475_RS02355 PF08240 Alcohol dehydrogenase GroES-like domain L3475_RS02355 PF00107 Zinc-binding dehydrogenase L3475_RS02360 PF02934 GatB/GatE catalytic domain L3475_RS02360 PF02637 GatB domain L3475_RS02365 PF01425 Amidase L3475_RS02370 PF02686 Glu-tRNAGln amidotransferase C subunit L3475_RS02375 PF03144 Elongation factor Tu domain 2 L3475_RS02375 PF16658 Class II release factor RF3, C-terminal domain L3475_RS02375 PF00009 Elongation factor Tu GTP binding domain L3475_RS02380 PF01501 Glycosyl transferase family 8 L3475_RS02385 PF01501 Glycosyl transferase family 8 L3475_RS02390 PF00830 Ribosomal L28 family L3475_RS02395 PF03780 Asp23 family, cell envelope-related function L3475_RS02400 PF13684 Dihydroxyacetone kinase family L3475_RS02400 PF02734 DAK2 domain L3475_RS02405 PF00205 Thiamine pyrophosphate enzyme, central domain L3475_RS02405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3475_RS02405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3475_RS02410 PF10369 Small subunit of acetolactate synthase L3475_RS02410 PF01842 ACT domain L3475_RS02415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L3475_RS02415 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L3475_RS02430 PF00291 Pyridoxal-phosphate dependent enzyme L3475_RS02430 PF00585 C-terminal regulatory domain of Threonine dehydratase L3475_RS02440 PF00005 ABC transporter L3475_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS02465 PF02673 Bacitracin resistance protein BacA L3475_RS02470 PF00817 impB/mucB/samB family L3475_RS02470 PF11799 impB/mucB/samB family C-terminal domain L3475_RS02470 PF11798 IMS family HHH motif L3475_RS02475 PF01228 Glycine radical L3475_RS02475 PF02901 Pyruvate formate lyase-like L3475_RS02480 PF13683 Integrase core domain L3475_RS02480 PF01610 Transposase L3475_RS02535 PF00480 ROK family L3475_RS02540 PF02378 Phosphotransferase system, EIIC L3475_RS02550 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3475_RS02555 PF00232 Glycosyl hydrolase family 1 L3475_RS02560 PF02378 Phosphotransferase system, EIIC L3475_RS02560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS02565 PF02386 Cation transport protein L3475_RS02570 PF02080 TrkA-C domain L3475_RS02570 PF02254 TrkA-N domain L3475_RS02580 PF07155 ECF-type riboflavin transporter, S component L3475_RS02590 PF12558 ATP-binding cassette cobalt transporter L3475_RS02590 PF00005 ABC transporter L3475_RS02600 PF00588 SpoU rRNA Methylase family L3475_RS02605 PF12822 ECF transporter, substrate-specific component L3475_RS02610 PF01569 PAP2 superfamily L3475_RS02620 PF00583 Acetyltransferase (GNAT) family L3475_RS02625 PF05066 HB1, ASXL, restriction endonuclease HTH domain L3475_RS02635 PF00117 Glutamine amidotransferase class-I L3475_RS02635 PF06418 CTP synthase N-terminus L3475_RS02640 PF02690 Na+/Pi-cotransporter L3475_RS02645 PF02973 Sialidase, N-terminal domain L3475_RS02645 PF04650 YSIRK type signal peptide L3475_RS02645 PF13088 BNR repeat-like domain L3475_RS02650 PF00162 Phosphoglycerate kinase L3475_RS02655 PF06081 Aromatic acid exporter family member 1 L3475_RS02660 PF13411 MerR HTH family regulatory protein L3475_RS02665 PF00120 Glutamine synthetase, catalytic domain L3475_RS02665 PF03951 Glutamine synthetase, beta-Grasp domain L3475_RS02680 PF01420 Type I restriction modification DNA specificity domain L3475_RS02685 PF00589 Phage integrase family L3475_RS02685 PF02899 Phage integrase, N-terminal SAM-like domain L3475_RS02695 PF01420 Type I restriction modification DNA specificity domain L3475_RS02700 PF02384 N-6 DNA Methylase L3475_RS02700 PF12161 HsdM N-terminal domain L3475_RS02705 PF00271 Helicase conserved C-terminal domain L3475_RS02705 PF04851 Type III restriction enzyme, res subunit L3475_RS02705 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) L3475_RS02705 PF08463 EcoEI R protein C-terminal L3475_RS02720 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding L3475_RS02720 PF01628 HrcA protein C terminal domain L3475_RS02725 PF01025 GrpE L3475_RS02730 PF00012 Hsp70 protein L3475_RS02740 PF00226 DnaJ domain L3475_RS02740 PF01556 DnaJ C terminal domain L3475_RS02740 PF00684 DnaJ central domain L3475_RS02755 PF01230 HIT domain L3475_RS02760 PF00005 ABC transporter L3475_RS02765 PF05975 Bacterial ABC transporter protein EcsB L3475_RS02785 PF17203 Single cache domain 3 L3475_RS02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS02785 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L3475_RS02785 PF00989 PAS fold L3475_RS02825 PF02517 CPBP intramembrane metalloprotease L3475_RS02870 PF02517 CPBP intramembrane metalloprotease L3475_RS02880 PF02390 Putative methyltransferase L3475_RS02885 PF02576 RimP N-terminal domain L3475_RS02885 PF17384 RimP C-terminal SH3 domain L3475_RS02890 PF13184 NusA-like KH domain L3475_RS02890 PF08529 NusA N-terminal domain L3475_RS02890 PF00575 S1 RNA binding domain L3475_RS02895 PF04296 Protein of unknown function (DUF448) L3475_RS02900 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family L3475_RS02905 PF00009 Elongation factor Tu GTP binding domain L3475_RS02905 PF04760 Translation initiation factor IF-2, N-terminal region L3475_RS02905 PF11987 Translation-initiation factor 2 L3475_RS02910 PF02033 Ribosome-binding factor A L3475_RS02960 PF03352 Methyladenine glycosylase L3475_RS02960 PF13302 Acetyltransferase (GNAT) domain L3475_RS02960 PF13673 Acetyltransferase (GNAT) domain L3475_RS02960 PF00117 Glutamine amidotransferase class-I L3475_RS02960 PF00958 GMP synthase C terminal domain L3475_RS02970 PF08264 Anticodon-binding domain of tRNA L3475_RS02970 PF00133 tRNA synthetases class I (I, L, M and V) L3475_RS02970 PF10458 Valyl tRNA synthetase tRNA binding arm L3475_RS02990 PF02661 Fic/DOC family L3475_RS02990 PF17841 BID domain of Bartonella effector protein (Bep) L3475_RS03000 PF00874 PRD domain L3475_RS03000 PF03123 CAT RNA binding domain L3475_RS03005 PF00367 phosphotransferase system, EIIB L3475_RS03005 PF02378 Phosphotransferase system, EIIC L3475_RS03005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3475_RS03010 PF00232 Glycosyl hydrolase family 1 L3475_RS03015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L3475_RS03015 PF01409 tRNA synthetases class II core domain (F) L3475_RS03020 PF00583 Acetyltransferase (GNAT) family L3475_RS03025 PF03483 B3/4 domain L3475_RS03025 PF03484 tRNA synthetase B5 domain L3475_RS03025 PF03147 Ferredoxin-fold anticodon binding domain L3475_RS03025 PF01588 Putative tRNA binding domain L3475_RS03025 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L3475_RS03040 PF01381 Helix-turn-helix L3475_RS03045 PF01717 Cobalamin-independent synthase, Catalytic domain L3475_RS03045 PF08267 Cobalamin-independent synthase, N-terminal domain L3475_RS03050 PF02219 Methylenetetrahydrofolate reductase L3475_RS03055 PF00013 KH domain L3475_RS03055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L3475_RS03055 PF01138 3' exoribonuclease family, domain 1 L3475_RS03055 PF03725 3' exoribonuclease family, domain 2 L3475_RS03055 PF00575 S1 RNA binding domain L3475_RS03060 PF00132 Bacterial transferase hexapeptide (six repeats) L3475_RS03060 PF06426 Serine acetyltransferase, N-terminal L3475_RS03070 PF09190 DALR domain L3475_RS03070 PF01406 tRNA synthetases class I (C) catalytic domain L3475_RS03075 PF00636 Ribonuclease III domain L3475_RS03080 PF13556 PucR C-terminal helix-turn-helix domain L3475_RS03095 PF02687 FtsX-like permease family L3475_RS03095 PF12704 MacB-like periplasmic core domain L3475_RS03100 PF00005 ABC transporter L3475_RS03105 PF02687 FtsX-like permease family L3475_RS03105 PF12704 MacB-like periplasmic core domain L3475_RS03115 PF00072 Response regulator receiver domain L3475_RS03115 PF00486 Transcriptional regulatory protein, C terminal L3475_RS03120 PF00672 HAMP domain L3475_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS03120 PF00512 His Kinase A (phospho-acceptor) domain L3475_RS03125 PF01116 Fructose-bisphosphate aldolase class-II L3475_RS03130 PF00970 Oxidoreductase FAD-binding domain L3475_RS03130 PF00111 2Fe-2S iron-sulfur cluster binding domain L3475_RS03130 PF00175 Oxidoreductase NAD-binding domain L3475_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS03140 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS03145 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS03150 PF00005 ABC transporter L3475_RS03155 PF01368 DHH family L3475_RS03155 PF17768 RecJ OB domain L3475_RS03155 PF10141 Single-strand DNA-specific exonuclease, C terminal domain L3475_RS03155 PF02272 DHHA1 domain L3475_RS03160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L3475_RS03160 PF17770 Ribonuclease J C-terminal domain L3475_RS03160 PF00753 Metallo-beta-lactamase superfamily L3475_RS03165 PF00756 Putative esterase L3475_RS03185 PF02151 UvrB/uvrC motif L3475_RS03185 PF01541 GIY-YIG catalytic domain L3475_RS03185 PF08459 UvrC Helix-hairpin-helix N-terminal L3475_RS03195 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS03200 PF00881 Nitroreductase family L3475_RS03205 PF01546 Peptidase family M20/M25/M40 L3475_RS03210 PF03167 Uracil DNA glycosylase superfamily L3475_RS03220 PF05525 Branched-chain amino acid transport protein L3475_RS03225 PF05343 M42 glutamyl aminopeptidase L3475_RS03240 PF00298 Ribosomal protein L11, RNA binding domain L3475_RS03240 PF03946 Ribosomal protein L11, N-terminal domain L3475_RS03245 PF00687 Ribosomal protein L1p/L10e family L3475_RS03260 PF00005 ABC transporter L3475_RS03280 PF00082 Subtilase family L3475_RS03295 PF03611 PTS system sugar-specific permease component L3475_RS03300 PF16355 Domain of unknown function (DUF4982) L3475_RS03300 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 L3475_RS03300 PF00703 Glycosyl hydrolases family 2 L3475_RS03300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L3475_RS03300 PF02837 Glycosyl hydrolases family 2, sugar binding domain L3475_RS03330 PF06962 Putative rRNA methylase L3475_RS03340 PF00999 Sodium/hydrogen exchanger family L3475_RS03350 PF02683 Cytochrome C biogenesis protein transmembrane region L3475_RS03355 PF08534 Redoxin L3475_RS03360 PF01641 SelR domain L3475_RS03360 PF01625 Peptide methionine sulfoxide reductase L3475_RS03365 PF00072 Response regulator receiver domain L3475_RS03365 PF12833 Helix-turn-helix domain L3475_RS03370 PF06580 Histidine kinase L3475_RS03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS03370 PF00672 HAMP domain L3475_RS03370 PF02743 Cache domain L3475_RS03375 PF04260 Protein of unknown function (DUF436) L3475_RS03380 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region L3475_RS03380 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region L3475_RS03380 PF00746 LPXTG cell wall anchor motif L3475_RS03380 PF07501 G5 domain L3475_RS03385 PF04715 Anthranilate synthase component I, N terminal region L3475_RS03385 PF00425 chorismate binding enzyme L3475_RS03400 PF00480 ROK family L3475_RS03405 PF00303 Thymidylate synthase L3475_RS03420 PF13167 GTP-binding GTPase N-terminal L3475_RS03420 PF16360 GTP-binding GTPase Middle Region L3475_RS03420 PF01926 50S ribosome-binding GTPase L3475_RS03425 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L3475_RS03425 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L3475_RS03430 PF00753 Metallo-beta-lactamase superfamily L3475_RS03430 PF12706 Beta-lactamase superfamily domain L3475_RS03435 PF00106 short chain dehydrogenase L3475_RS03440 PF03466 LysR substrate binding domain L3475_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3475_RS03450 PF00581 Rhodanese-like domain L3475_RS03460 PF00849 RNA pseudouridylate synthase L3475_RS03460 PF01479 S4 domain L3475_RS03465 PF00679 Elongation factor G C-terminus L3475_RS03465 PF14492 Elongation Factor G, domain II L3475_RS03465 PF03144 Elongation factor Tu domain 2 L3475_RS03465 PF00009 Elongation factor Tu GTP binding domain L3475_RS03485 PF00005 ABC transporter L3475_RS03490 PF08245 Mur ligase middle domain L3475_RS03490 PF02875 Mur ligase family, glutamate ligase domain L3475_RS03495 PF03033 Glycosyltransferase family 28 N-terminal domain L3475_RS03495 PF04101 Glycosyltransferase family 28 C-terminal domain L3475_RS03500 PF08478 POTRA domain, FtsQ-type L3475_RS03505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L3475_RS03510 PF00156 Phosphoribosyl transferase domain L3475_RS03535 PF00005 ABC transporter L3475_RS03540 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS03570 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS03580 PF00152 tRNA synthetases class II (D, K and N) L3475_RS03580 PF01336 OB-fold nucleic acid binding domain L3475_RS03590 PF01070 FMN-dependent dehydrogenase L3475_RS03605 PF02110 Hydroxyethylthiazole kinase family L3475_RS03610 PF02581 Thiamine monophosphate synthase L3475_RS03620 PF00005 ABC transporter L3475_RS03630 PF03070 TENA/THI-4/PQQC family L3475_RS03640 PF02110 Hydroxyethylthiazole kinase family L3475_RS03645 PF02581 Thiamine monophosphate synthase L3475_RS03650 PF08543 Phosphomethylpyrimidine kinase L3475_RS03655 PF03965 Penicillinase repressor L3475_RS03665 PF00403 Heavy-metal-associated domain L3475_RS03670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3475_RS03670 PF00205 Thiamine pyrophosphate enzyme, central domain L3475_RS03670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3475_RS03690 PF01238 Phosphomannose isomerase type I L3475_RS03695 PF00209 Sodium:neurotransmitter symporter family L3475_RS03715 PF02645 Uncharacterised protein, DegV family COG1307 L3475_RS03725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3475_RS03735 PF00574 Clp protease L3475_RS03740 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) L3475_RS03745 PF13458 Periplasmic binding protein L3475_RS03750 PF02653 Branched-chain amino acid transport system / permease component L3475_RS03755 PF11862 Domain of unknown function (DUF3382) L3475_RS03755 PF02653 Branched-chain amino acid transport system / permease component L3475_RS03760 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3475_RS03760 PF00005 ABC transporter L3475_RS03765 PF00005 ABC transporter L3475_RS03770 PF01743 Poly A polymerase head domain L3475_RS03770 PF00571 CBS domain L3475_RS03780 PF00005 ABC transporter L3475_RS03785 PF02687 FtsX-like permease family L3475_RS03785 PF18075 FtsX extracellular domain L3475_RS03790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3475_RS03790 PF00367 phosphotransferase system, EIIB L3475_RS03790 PF02378 Phosphotransferase system, EIIC L3475_RS03795 PF03372 Endonuclease/Exonuclease/phosphatase family L3475_RS03800 PF00270 DEAD/DEAH box helicase L3475_RS03800 PF00271 Helicase conserved C-terminal domain L3475_RS03805 PF02773 S-adenosylmethionine synthetase, C-terminal domain L3475_RS03805 PF02772 S-adenosylmethionine synthetase, central domain L3475_RS03805 PF00438 S-adenosylmethionine synthetase, N-terminal domain L3475_RS03810 PF01180 Dihydroorotate dehydrogenase L3475_RS03820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L3475_RS03820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L3475_RS03825 PF06265 Protein of unknown function (DUF1027) L3475_RS03830 PF04055 Radical SAM superfamily L3475_RS03840 PF00005 ABC transporter L3475_RS03840 PF12848 ABC transporter L3475_RS03845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L3475_RS03860 PF00886 Ribosomal protein S16 L3475_RS03880 PF00270 DEAD/DEAH box helicase L3475_RS03880 PF00271 Helicase conserved C-terminal domain L3475_RS03885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3475_RS03885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3475_RS03895 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain L3475_RS03895 PF01522 Polysaccharide deacetylase L3475_RS03900 PF00248 Aldo/keto reductase family L3475_RS03910 PF02091 Glycyl-tRNA synthetase alpha subunit L3475_RS03915 PF02092 Glycyl-tRNA synthetase beta subunit L3475_RS03920 PF05979 Bacterial protein of unknown function (DUF896) L3475_RS03925 PF00890 FAD binding domain L3475_RS03925 PF03358 NADPH-dependent FMN reductase L3475_RS03925 PF04205 FMN-binding domain L3475_RS03930 PF00890 FAD binding domain L3475_RS03930 PF04205 FMN-binding domain L3475_RS03930 PF03358 NADPH-dependent FMN reductase L3475_RS03935 PF02424 ApbE family L3475_RS03940 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3475_RS03940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3475_RS03945 PF01680 SOR/SNZ family L3475_RS03950 PF01174 SNO glutamine amidotransferase family L3475_RS03955 PF03006 Haemolysin-III related L3475_RS03970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L3475_RS03970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L3475_RS03975 PF03960 ArsC family L3475_RS03980 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS03985 PF00005 ABC transporter L3475_RS03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3475_RS04000 PF00588 SpoU rRNA Methylase family L3475_RS04000 PF08032 RNA 2'-O ribose methyltransferase substrate binding L3475_RS04005 PF01327 Polypeptide deformylase L3475_RS04010 PF09587 Bacterial capsule synthesis protein PGA_cap L3475_RS04035 PF00144 Beta-lactamase L3475_RS04040 PF00892 EamA-like transporter family L3475_RS04045 PF07702 UTRA domain L3475_RS04045 PF00392 Bacterial regulatory proteins, gntR family L3475_RS04050 PF00958 GMP synthase C terminal domain L3475_RS04050 PF02540 NAD synthase L3475_RS04050 PF00117 Glutamine amidotransferase class-I L3475_RS04065 PF00664 ABC transporter transmembrane region L3475_RS04065 PF00005 ABC transporter L3475_RS04070 PF00664 ABC transporter transmembrane region L3475_RS04070 PF00005 ABC transporter L3475_RS04085 PF00005 ABC transporter L3475_RS04095 PF01555 DNA methylase L3475_RS04095 PF18755 Restriction Enzyme Adenine Methylase Associated L3475_RS04105 PF01136 Peptidase family U32 L3475_RS04105 PF16325 Peptidase family U32 C-terminal domain L3475_RS04120 PF00005 ABC transporter L3475_RS04130 PF01381 Helix-turn-helix L3475_RS04140 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family L3475_RS04140 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain L3475_RS04140 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L3475_RS04145 PF02540 NAD synthase L3475_RS04150 PF13302 Acetyltransferase (GNAT) domain L3475_RS04165 PF02547 Queuosine biosynthesis protein L3475_RS04170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L3475_RS04175 PF01165 Ribosomal protein S21 L3475_RS04180 PF02603 HPr Serine kinase N terminus L3475_RS04180 PF07475 HPr Serine kinase C-terminal domain L3475_RS04185 PF01790 Prolipoprotein diacylglyceryl transferase L3475_RS04200 PF06969 HemN C-terminal domain L3475_RS04200 PF04055 Radical SAM superfamily L3475_RS04210 PF13344 Haloacid dehalogenase-like hydrolase L3475_RS04220 PF03960 ArsC family L3475_RS04225 PF05256 Uncharacterised protein family (UPF0223) L3475_RS04230 PF00459 Inositol monophosphatase family L3475_RS04235 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF L3475_RS04235 PF01189 16S rRNA methyltransferase RsmB/F L3475_RS04235 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF L3475_RS04240 PF12849 PBP superfamily domain L3475_RS04245 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS04255 PF00005 ABC transporter L3475_RS04260 PF00005 ABC transporter L3475_RS04265 PF01895 PhoU domain L3475_RS04270 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS04275 PF00392 Bacterial regulatory proteins, gntR family L3475_RS04275 PF00155 Aminotransferase class I and II L3475_RS04280 PF03306 Alpha-acetolactate decarboxylase L3475_RS04290 PF01565 FAD binding domain L3475_RS04290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L3475_RS04295 PF00005 ABC transporter L3475_RS04295 PF08402 TOBE domain L3475_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS04310 PF13416 Bacterial extracellular solute-binding protein L3475_RS04325 PF01411 tRNA synthetases class II (A) L3475_RS04325 PF02272 DHHA1 domain L3475_RS04325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3475_RS04330 PF09154 Domain of unknown function (DUF1939) L3475_RS04330 PF00128 Alpha amylase, catalytic domain L3475_RS04335 PF00005 ABC transporter L3475_RS04345 PF10672 S-adenosylmethionine-dependent methyltransferase L3475_RS04345 PF17785 PUA-like domain L3475_RS04350 PF01487 Type I 3-dehydroquinase L3475_RS04355 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L3475_RS04355 PF08501 Shikimate dehydrogenase substrate binding domain L3475_RS04360 PF01761 3-dehydroquinate synthase L3475_RS04365 PF01264 Chorismate synthase L3475_RS04370 PF02153 Prephenate dehydrogenase L3475_RS04375 PF06133 Control of competence regulator ComK, YlbF/YmcA L3475_RS04380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3475_RS04385 PF01202 Shikimate kinase L3475_RS04390 PF00800 Prephenate dehydratase L3475_RS04395 PF03816 Cell envelope-related transcriptional attenuator domain L3475_RS04400 PF04991 LicD family L3475_RS04405 PF00534 Glycosyl transferases group 1 L3475_RS04405 PF13439 Glycosyltransferase Family 4 L3475_RS04410 PF00535 Glycosyl transferase family 2 L3475_RS04425 PF05389 Negative regulator of genetic competence (MecA) L3475_RS04430 PF00742 Homoserine dehydrogenase L3475_RS04430 PF03447 Homoserine dehydrogenase, NAD binding domain L3475_RS04435 PF08544 GHMP kinases C terminal L3475_RS04435 PF00288 GHMP kinases N terminal domain L3475_RS04445 PF01625 Peptide methionine sulfoxide reductase L3475_RS04445 PF01641 SelR domain L3475_RS04450 PF00664 ABC transporter transmembrane region L3475_RS04450 PF00005 ABC transporter L3475_RS04455 PF00664 ABC transporter transmembrane region L3475_RS04455 PF00005 ABC transporter L3475_RS04460 PF01979 Amidohydrolase family L3475_RS04465 PF00466 Ribosomal protein L10 L3475_RS04470 PF16320 Ribosomal protein L7/L12 dimerisation domain L3475_RS04470 PF00542 Ribosomal protein L7/L12 C-terminal domain L3475_RS04480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L3475_RS04480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L3475_RS04500 PF01197 Ribosomal protein L31 L3475_RS04505 PF02272 DHHA1 domain L3475_RS04505 PF01368 DHH family L3475_RS04510 PF00258 Flavodoxin L3475_RS04515 PF01817 Chorismate mutase type II L3475_RS04515 PF01842 ACT domain L3475_RS04515 PF00800 Prephenate dehydratase L3475_RS04520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L3475_RS04525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L3475_RS04530 PF01245 Ribosomal protein L19 L3475_RS04550 PF01966 HD domain L3475_RS04560 PF04297 Putative helix-turn-helix protein, YlxM / p13 like L3475_RS04565 PF02978 Signal peptide binding domain L3475_RS04565 PF00448 SRP54-type protein, GTPase domain L3475_RS04565 PF02881 SRP54-type protein, helical bundle domain L3475_RS04570 PF00860 Permease family L3475_RS04575 PF02527 rRNA small subunit methyltransferase G L3475_RS04580 PF04011 LemA family L3475_RS04585 PF01435 Peptidase family M48 L3475_RS04590 PF00005 ABC transporter L3475_RS04590 PF16326 ABC transporter C-terminal domain L3475_RS04590 PF12848 ABC transporter L3475_RS04600 PF00633 Helix-hairpin-helix motif L3475_RS04600 PF00730 HhH-GPD superfamily base excision DNA repair protein L3475_RS04600 PF10576 Iron-sulfur binding domain of endonuclease III L3475_RS04605 PF00156 Phosphoribosyl transferase domain L3475_RS04610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3475_RS04610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3475_RS04615 PF00117 Glutamine amidotransferase class-I L3475_RS04615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L3475_RS04620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L3475_RS04620 PF02142 MGS-like domain L3475_RS04620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3475_RS04625 PF04991 LicD family L3475_RS04630 PF04991 LicD family L3475_RS04640 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L3475_RS04645 PF08240 Alcohol dehydrogenase GroES-like domain L3475_RS04660 PF12804 MobA-like NTP transferase domain L3475_RS04665 PF02481 DNA recombination-mediator protein A L3475_RS04665 PF18255 DNA processing protein A sterile alpha motif domain L3475_RS04680 PF01131 DNA topoisomerase L3475_RS04680 PF01751 Toprim domain L3475_RS04680 PF01396 Topoisomerase DNA binding C4 zinc finger L3475_RS04685 PF04304 Protein of unknown function (DUF454) L3475_RS04690 PF03932 CutC family L3475_RS04700 PF00682 HMGL-like L3475_RS04700 PF08502 LeuA allosteric (dimerisation) domain L3475_RS04705 PF08502 LeuA allosteric (dimerisation) domain L3475_RS04705 PF00682 HMGL-like L3475_RS04710 PF00180 Isocitrate/isopropylmalate dehydrogenase L3475_RS04720 PF00694 Aconitase C-terminal domain L3475_RS04730 PF07728 AAA domain (dynein-related subfamily) L3475_RS04730 PF12102 Domain of unknown function (DUF3578) L3475_RS04740 PF00478 IMP dehydrogenase / GMP reductase domain L3475_RS04750 PF00035 Double-stranded RNA binding motif L3475_RS04750 PF14622 Ribonuclease-III-like L3475_RS04755 PF02463 RecF/RecN/SMC N terminal domain L3475_RS04755 PF06470 SMC proteins Flexible Hinge Domain L3475_RS04770 PF00448 SRP54-type protein, GTPase domain L3475_RS04770 PF02881 SRP54-type protein, helical bundle domain L3475_RS04775 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L3475_RS04775 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L3475_RS04780 PF00005 ABC transporter L3475_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS04795 PF00271 Helicase conserved C-terminal domain L3475_RS04795 PF04851 Type III restriction enzyme, res subunit L3475_RS04795 PF02151 UvrB/uvrC motif L3475_RS04795 PF12344 Ultra-violet resistance protein B L3475_RS04795 PF17757 UvrB interaction domain L3475_RS04810 PF09297 NADH pyrophosphatase zinc ribbon domain L3475_RS04810 PF00293 NUDIX domain L3475_RS04815 PF08279 HTH domain L3475_RS04815 PF02829 3H domain L3475_RS04825 PF12822 ECF transporter, substrate-specific component L3475_RS04830 PF02441 Flavoprotein L3475_RS04840 PF01268 Formate--tetrahydrofolate ligase L3475_RS04845 PF00730 HhH-GPD superfamily base excision DNA repair protein L3475_RS04845 PF14815 NUDIX domain L3475_RS04850 PF00486 Transcriptional regulatory protein, C terminal L3475_RS04850 PF00072 Response regulator receiver domain L3475_RS04855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS04855 PF00672 HAMP domain L3475_RS04855 PF13426 PAS domain L3475_RS04855 PF00512 His Kinase A (phospho-acceptor) domain L3475_RS04860 PF00753 Metallo-beta-lactamase superfamily L3475_RS04875 PF07885 Ion channel L3475_RS04885 PF00056 lactate/malate dehydrogenase, NAD binding domain L3475_RS04885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L3475_RS04890 PF03989 DNA gyrase C-terminal domain, beta-propeller L3475_RS04890 PF00521 DNA gyrase/topoisomerase IV, subunit A L3475_RS04895 PF04203 Sortase domain L3475_RS04915 PF16198 tRNA pseudouridylate synthase B C-terminal domain L3475_RS04915 PF01509 TruB family pseudouridylate synthase (N terminal domain) L3475_RS04925 PF00485 Phosphoribulokinase / Uridine kinase family L3475_RS04930 PF02601 Exonuclease VII, large subunit L3475_RS04930 PF13742 OB-fold nucleic acid binding domain L3475_RS04935 PF02609 Exonuclease VII small subunit L3475_RS04940 PF00348 Polyprenyl synthetase L3475_RS04945 PF01728 FtsJ-like methyltransferase L3475_RS04945 PF01479 S4 domain L3475_RS04950 PF01316 Arginine repressor, DNA binding domain L3475_RS04950 PF02863 Arginine repressor, C-terminal domain L3475_RS04955 PF13476 AAA domain L3475_RS04960 PF00149 Calcineurin-like phosphoesterase L3475_RS04965 PF03144 Elongation factor Tu domain 2 L3475_RS04965 PF00009 Elongation factor Tu GTP binding domain L3475_RS04965 PF00679 Elongation factor G C-terminus L3475_RS04965 PF06421 GTP-binding protein LepA C-terminus L3475_RS04995 PF02502 Ribose/Galactose Isomerase L3475_RS05000 PF02502 Ribose/Galactose Isomerase L3475_RS05005 PF00294 pfkB family carbohydrate kinase L3475_RS05010 PF01791 DeoC/LacD family aldolase L3475_RS05015 PF00874 PRD domain L3475_RS05015 PF03123 CAT RNA binding domain L3475_RS05020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3475_RS05025 PF02378 Phosphotransferase system, EIIC L3475_RS05025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS05030 PF00232 Glycosyl hydrolase family 1 L3475_RS05040 PF08220 DeoR-like helix-turn-helix domain L3475_RS05040 PF00455 DeoR C terminal sensor domain L3475_RS05045 PF00268 Ribonucleotide reductase, small chain L3475_RS05050 PF00317 Ribonucleotide reductase, all-alpha domain L3475_RS05050 PF08343 Ribonucleotide reductase N-terminal L3475_RS05050 PF02867 Ribonucleotide reductase, barrel domain L3475_RS05055 PF00462 Glutaredoxin L3475_RS05060 PF00381 PTS HPr component phosphorylation site L3475_RS05065 PF02896 PEP-utilising enzyme, TIM barrel domain L3475_RS05065 PF05524 PEP-utilising enzyme, N-terminal L3475_RS05065 PF00391 PEP-utilising enzyme, mobile domain L3475_RS05075 PF03610 PTS system fructose IIA component L3475_RS05080 PF13419 Haloacid dehalogenase-like hydrolase L3475_RS05090 PF03167 Uracil DNA glycosylase superfamily L3475_RS05095 PF00293 NUDIX domain L3475_RS05100 PF01979 Amidohydrolase family L3475_RS05110 PF01554 MatE L3475_RS05115 PF00676 Dehydrogenase E1 component L3475_RS05120 PF02779 Transketolase, pyrimidine binding domain L3475_RS05120 PF02780 Transketolase, C-terminal domain L3475_RS05125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3475_RS05125 PF02817 e3 binding domain L3475_RS05125 PF00364 Biotin-requiring enzyme L3475_RS05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3475_RS05130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3475_RS05135 PF03099 Biotin/lipoate A/B protein ligase family L3475_RS05135 PF10437 Bacterial lipoate protein ligase C-terminus L3475_RS05140 PF00589 Phage integrase family L3475_RS05145 PF00654 Voltage gated chloride channel L3475_RS05150 PF01351 Ribonuclease HII L3475_RS05155 PF01926 50S ribosome-binding GTPase L3475_RS05160 PF07501 G5 domain L3475_RS05160 PF07581 The GLUG motif L3475_RS05160 PF04650 YSIRK type signal peptide L3475_RS05160 PF00746 LPXTG cell wall anchor motif L3475_RS05160 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region L3475_RS05160 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region L3475_RS05170 PF12705 PD-(D/E)XK nuclease superfamily L3475_RS05170 PF00580 UvrD/REP helicase N-terminal domain L3475_RS05170 PF13361 UvrD-like helicase C-terminal domain L3475_RS05175 PF12705 PD-(D/E)XK nuclease superfamily L3475_RS05200 PF03952 Enolase, N-terminal domain L3475_RS05200 PF00113 Enolase, C-terminal TIM barrel domain L3475_RS05210 PF02595 Glycerate kinase family L3475_RS05225 PF00534 Glycosyl transferases group 1 L3475_RS05225 PF08323 Starch synthase catalytic domain L3475_RS05230 PF00483 Nucleotidyl transferase L3475_RS05235 PF00483 Nucleotidyl transferase L3475_RS05240 PF00128 Alpha amylase, catalytic domain L3475_RS05240 PF02806 Alpha amylase, C-terminal all-beta domain L3475_RS05240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3475_RS05245 PF00171 Aldehyde dehydrogenase family L3475_RS05250 PF17999 Pullulanase N1-terminal domain L3475_RS05250 PF00128 Alpha amylase, catalytic domain L3475_RS05250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3475_RS05255 PF00533 BRCA1 C Terminus (BRCT) domain L3475_RS05255 PF01653 NAD-dependent DNA ligase adenylation domain L3475_RS05255 PF03120 NAD-dependent DNA ligase OB-fold domain L3475_RS05255 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L3475_RS05255 PF12826 Helix-hairpin-helix motif L3475_RS05270 PF16326 ABC transporter C-terminal domain L3475_RS05270 PF12848 ABC transporter L3475_RS05270 PF00005 ABC transporter L3475_RS05275 PF00216 Bacterial DNA-binding protein L3475_RS05280 PF02645 Uncharacterised protein, DegV family COG1307 L3475_RS05285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L3475_RS05285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L3475_RS05290 PF06574 FAD synthetase L3475_RS05290 PF01687 Riboflavin kinase L3475_RS05300 PF01016 Ribosomal L27 protein L3475_RS05310 PF00829 Ribosomal prokaryotic L21 protein L3475_RS05320 PF02575 YbaB/EbfC DNA-binding family L3475_RS05330 PF01515 Phosphate acetyl/butaryl transferase L3475_RS05335 PF00849 RNA pseudouridylate synthase L3475_RS05340 PF01513 ATP-NAD kinase L3475_RS05345 PF04607 Region found in RelA / SpoT proteins L3475_RS05355 PF14572 Phosphoribosyl synthetase-associated domain L3475_RS05355 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L3475_RS05360 PF00266 Aminotransferase class-V L3475_RS05375 PF02629 CoA binding domain L3475_RS05375 PF06971 Putative DNA-binding protein N-terminus L3475_RS05380 PF07722 Peptidase C26 L3475_RS05385 PF04002 RadC-like JAB domain L3475_RS05390 PF00580 UvrD/REP helicase N-terminal domain L3475_RS05390 PF13361 UvrD-like helicase C-terminal domain L3475_RS05400 PF00557 Metallopeptidase family M24 L3475_RS05405 PF07085 DRTGG domain L3475_RS05405 PF00392 Bacterial regulatory proteins, gntR family L3475_RS05405 PF03061 Thioesterase superfamily L3475_RS05405 PF00571 CBS domain L3475_RS05415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3475_RS05430 PF09269 Domain of unknown function (DUF1967) L3475_RS05430 PF01018 GTP1/OBG L3475_RS05430 PF01926 50S ribosome-binding GTPase L3475_RS05445 PF13439 Glycosyltransferase Family 4 L3475_RS05445 PF00534 Glycosyl transferases group 1 L3475_RS05450 PF13439 Glycosyltransferase Family 4 L3475_RS05450 PF00534 Glycosyl transferases group 1 L3475_RS05455 PF01883 Iron-sulfur cluster assembly protein L3475_RS05460 PF03979 Sigma-70 factor, region 1.1 L3475_RS05460 PF00140 Sigma-70 factor, region 1.2 L3475_RS05460 PF04542 Sigma-70 region 2 L3475_RS05460 PF04539 Sigma-70 region 3 L3475_RS05460 PF04545 Sigma-70, region 4 L3475_RS05465 PF08275 DNA primase catalytic core, N-terminal domain L3475_RS05465 PF01807 CHC2 zinc finger L3475_RS05465 PF10410 DnaB-helicase binding domain of primase L3475_RS05470 PF00005 ABC transporter L3475_RS05485 PF00311 Phosphoenolpyruvate carboxylase L3475_RS05490 PF01098 Cell cycle protein L3475_RS05510 PF00583 Acetyltransferase (GNAT) family L3475_RS05525 PF00781 Diacylglycerol kinase catalytic domain L3475_RS05580 PF17841 BID domain of Bartonella effector protein (Bep) L3475_RS05580 PF03389 MobA/MobL family L3475_RS05580 PF01443 Viral (Superfamily 1) RNA helicase L3475_RS05595 PF00005 ABC transporter L3475_RS05600 PF01032 FecCD transport family L3475_RS05605 PF01032 FecCD transport family L3475_RS05625 PF05958 tRNA (Uracil-5-)-methyltransferase L3475_RS05645 PF00464 Serine hydroxymethyltransferase L3475_RS05660 PF05175 Methyltransferase small domain L3475_RS05665 PF00472 RF-1 domain L3475_RS05665 PF03462 PCRF domain L3475_RS05670 PF00265 Thymidine kinase L3475_RS05675 PF01361 Tautomerase enzyme L3475_RS05680 PF10396 GTP-binding protein TrmE N-terminus L3475_RS05680 PF12631 MnmE helical domain L3475_RS05680 PF01926 50S ribosome-binding GTPase L3475_RS05685 PF00701 Dihydrodipicolinate synthetase family L3475_RS05690 PF02774 Semialdehyde dehydrogenase, dimerisation domain L3475_RS05690 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3475_RS05700 PF06177 QueT transporter L3475_RS05710 PF01741 Large-conductance mechanosensitive channel, MscL L3475_RS05715 PF00762 Ferrochelatase L3475_RS05725 PF04203 Sortase domain L3475_RS05730 PF12892 Spy0128-like isopeptide containing domain L3475_RS05735 PF10502 Signal peptidase, peptidase S26 L3475_RS05745 PF01546 Peptidase family M20/M25/M40 L3475_RS05745 PF07687 Peptidase dimerisation domain L3475_RS05780 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment L3475_RS05780 PF01297 Zinc-uptake complex component A periplasmic L3475_RS05785 PF13520 Amino acid permease L3475_RS05790 PF00578 AhpC/TSA family L3475_RS05795 PF02683 Cytochrome C biogenesis protein transmembrane region L3475_RS05820 PF03009 Glycerophosphoryl diester phosphodiesterase family L3475_RS05825 PF11490 DNA polymerase III polC-type N-terminus II L3475_RS05825 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3475_RS05825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3475_RS05825 PF14579 Helix-hairpin-helix motif L3475_RS05825 PF02811 PHP domain L3475_RS05825 PF00929 Exonuclease L3475_RS05830 PF08279 HTH domain L3475_RS05830 PF04394 Protein of unknown function, DUF536 L3475_RS05835 PF01048 Phosphorylase superfamily L3475_RS05845 PF00293 NUDIX domain L3475_RS05850 PF14602 Hexapeptide repeat of succinyl-transferase L3475_RS05850 PF00483 Nucleotidyl transferase L3475_RS05850 PF00132 Bacterial transferase hexapeptide (six repeats) L3475_RS05865 PF04073 Aminoacyl-tRNA editing domain L3475_RS05885 PF13145 PPIC-type PPIASE domain L3475_RS05890 PF01596 O-methyltransferase L3475_RS05895 PF01432 Peptidase family M3 L3475_RS05895 PF08439 Oligopeptidase F L3475_RS05905 PF09313 Domain of unknown function (DUF1971) L3475_RS05905 PF03848 Tellurite resistance protein TehB L3475_RS05910 PF01668 SmpB protein L3475_RS05915 PF00575 S1 RNA binding domain L3475_RS05915 PF17876 Cold shock domain L3475_RS05915 PF00773 RNB domain L3475_RS05915 PF08206 Ribonuclease B OB domain L3475_RS05925 PF00471 Ribosomal protein L33 L3475_RS05930 PF07690 Major Facilitator Superfamily L3475_RS05930 PF00083 Sugar (and other) transporter L3475_RS05935 PF01121 Dephospho-CoA kinase L3475_RS05940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L3475_RS05940 PF06827 Zinc finger found in FPG and IleRS L3475_RS05940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L3475_RS05945 PF01926 50S ribosome-binding GTPase L3475_RS05945 PF07650 KH domain L3475_RS05950 PF01219 Prokaryotic diacylglycerol kinase L3475_RS05955 PF02130 Uncharacterized protein family UPF0054 L3475_RS05960 PF05670 NFACT protein RNA binding domain L3475_RS05965 PF17890 Peptidoglycan hydrolase LytB WW-like domain L3475_RS05965 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain L3475_RS05965 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L3475_RS05965 PF01473 Putative cell wall binding repeat L3475_RS05970 PF01180 Dihydroorotate dehydrogenase L3475_RS05975 PF00175 Oxidoreductase NAD-binding domain L3475_RS05975 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B L3475_RS05975 PF00970 Oxidoreductase FAD-binding domain L3475_RS05980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3475_RS05985 PF00453 Ribosomal protein L20 L3475_RS05990 PF01632 Ribosomal protein L35 L3475_RS05995 PF00707 Translation initiation factor IF-3, C-terminal domain L3475_RS05995 PF05198 Translation initiation factor IF-3, N-terminal domain L3475_RS06005 PF00005 ABC transporter L3475_RS06015 PF13567 Domain of unknown function (DUF4131) L3475_RS06015 PF00753 Metallo-beta-lactamase superfamily L3475_RS06015 PF03772 Competence protein L3475_RS06020 PF10531 SLBB domain L3475_RS06025 PF13302 Acetyltransferase (GNAT) domain L3475_RS06045 PF02562 PhoH-like protein L3475_RS06050 PF06855 YozE SAM-like fold L3475_RS06055 PF17783 CvfB-like winged helix domain L3475_RS06055 PF13509 S1 domain L3475_RS06060 PF01765 Ribosome recycling factor L3475_RS06065 PF00696 Amino acid kinase family L3475_RS06070 PF01134 Glucose inhibited division protein A L3475_RS06075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3475_RS06080 PF06156 Initiation control protein YabA L3475_RS06085 PF09115 DNA polymerase III, delta subunit, C terminal L3475_RS06090 PF02223 Thymidylate kinase L3475_RS06095 PF14748 Pyrroline-5-carboxylate reductase dimerisation L3475_RS06095 PF03807 NADP oxidoreductase coenzyme F420-dependent L3475_RS06100 PF00171 Aldehyde dehydrogenase family L3475_RS06105 PF01472 PUA domain L3475_RS06105 PF00696 Amino acid kinase family L3475_RS06115 PF01479 S4 domain L3475_RS06115 PF00849 RNA pseudouridylate synthase L3475_RS06120 PF01252 Signal peptidase (SPase) II L3475_RS06125 PF03466 LysR substrate binding domain L3475_RS06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3475_RS06150 PF00795 Carbon-nitrogen hydrolase L3475_RS06155 PF04371 Porphyromonas-type peptidyl-arginine deiminase L3475_RS06160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3475_RS06165 PF16653 Saccharopine dehydrogenase C-terminal domain L3475_RS06165 PF03435 Saccharopine dehydrogenase NADP binding domain L3475_RS06170 PF17284 Spermidine synthase tetramerisation domain L3475_RS06190 PF01276 Orn/Lys/Arg decarboxylase, major domain L3475_RS06190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L3475_RS06195 PF13936 Helix-turn-helix domain L3475_RS06205 PF02687 FtsX-like permease family L3475_RS06210 PF00005 ABC transporter L3475_RS06230 PF17283 SprT-like zinc ribbon domain L3475_RS06230 PF10263 SprT-like family L3475_RS06235 PF00575 S1 RNA binding domain L3475_RS06235 PF17674 HHH domain L3475_RS06235 PF09371 Tex-like protein N-terminal domain L3475_RS06235 PF16921 Tex protein YqgF-like domain L3475_RS06245 PF03773 Predicted permease L3475_RS06250 PF09323 Domain of unknown function (DUF1980) L3475_RS06285 PF00224 Pyruvate kinase, barrel domain L3475_RS06285 PF02887 Pyruvate kinase, alpha/beta domain L3475_RS06290 PF00365 Phosphofructokinase L3475_RS06295 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3475_RS06295 PF01336 OB-fold nucleic acid binding domain L3475_RS06295 PF02811 PHP domain L3475_RS06295 PF14579 Helix-hairpin-helix motif L3475_RS06295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3475_RS06300 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal L3475_RS06300 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3475_RS06300 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3475_RS06305 PF02863 Arginine repressor, C-terminal domain L3475_RS06305 PF01316 Arginine repressor, DNA binding domain L3475_RS06315 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L3475_RS06315 PF00271 Helicase conserved C-terminal domain L3475_RS06315 PF04851 Type III restriction enzyme, res subunit L3475_RS06315 PF08463 EcoEI R protein C-terminal L3475_RS06325 PF02899 Phage integrase, N-terminal SAM-like domain L3475_RS06325 PF00589 Phage integrase family L3475_RS06340 PF01420 Type I restriction modification DNA specificity domain L3475_RS06345 PF02384 N-6 DNA Methylase L3475_RS06375 PF02926 THUMP domain L3475_RS06375 PF02568 Thiamine biosynthesis protein (ThiI) L3475_RS06380 PF00266 Aminotransferase class-V L3475_RS06390 PF01580 FtsK/SpoIIIE family L3475_RS06390 PF09397 Ftsk gamma domain L3475_RS06390 PF17854 FtsK alpha domain L3475_RS06395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS06395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3475_RS06400 PF00294 pfkB family carbohydrate kinase L3475_RS06405 PF00455 DeoR C terminal sensor domain L3475_RS06405 PF08220 DeoR-like helix-turn-helix domain L3475_RS06420 PF01594 AI-2E family transporter L3475_RS06425 PF07943 Penicillin-binding protein 5, C-terminal domain L3475_RS06425 PF00768 D-alanyl-D-alanine carboxypeptidase L3475_RS06430 PF01458 Uncharacterized protein family (UPF0051) L3475_RS06435 PF01592 NifU-like N terminal domain L3475_RS06440 PF00266 Aminotransferase class-V L3475_RS06445 PF01458 Uncharacterized protein family (UPF0051) L3475_RS06450 PF00005 ABC transporter L3475_RS06460 PF12169 DNA polymerase III subunits gamma and tau domain III L3475_RS06465 PF13185 GAF domain L3475_RS06470 PF00575 S1 RNA binding domain L3475_RS06490 PF01470 Pyroglutamyl peptidase L3475_RS06505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3475_RS06510 PF01063 Amino-transferase class IV L3475_RS06515 PF03989 DNA gyrase C-terminal domain, beta-propeller L3475_RS06515 PF00521 DNA gyrase/topoisomerase IV, subunit A L3475_RS06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS06525 PF01751 Toprim domain L3475_RS06525 PF00204 DNA gyrase B L3475_RS06525 PF00986 DNA gyrase B subunit, carboxyl terminus L3475_RS06530 PF02660 Glycerol-3-phosphate acyltransferase L3475_RS06540 PF02653 Branched-chain amino acid transport system / permease component L3475_RS06545 PF02653 Branched-chain amino acid transport system / permease component L3475_RS06550 PF00005 ABC transporter L3475_RS06555 PF02608 ABC transporter substrate-binding protein PnrA-like L3475_RS06560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3475_RS06565 PF01791 DeoC/LacD family aldolase L3475_RS06570 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L3475_RS06570 PF02885 Glycosyl transferase family, helical bundle domain L3475_RS06570 PF00591 Glycosyl transferase family, a/b domain L3475_RS06575 PF05175 Methyltransferase small domain L3475_RS06585 PF00485 Phosphoribulokinase / Uridine kinase family L3475_RS06590 PF01649 Ribosomal protein S20 L3475_RS06600 PF01048 Phosphorylase superfamily L3475_RS06605 PF17440 Thiol-activated cytolysin beta sandwich domain L3475_RS06605 PF01289 Thiol-activated cytolysin L3475_RS06620 PF01048 Phosphorylase superfamily L3475_RS06630 PF01676 Metalloenzyme superfamily L3475_RS06635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) L3475_RS06640 PF01256 Carbohydrate kinase L3475_RS06645 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L3475_RS06645 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L3475_RS06650 PF00005 ABC transporter L3475_RS06655 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS06660 PF08796 Protein of unknown function (DUF1797) L3475_RS06665 PF00004 ATPase family associated with various cellular activities (AAA) L3475_RS06665 PF07724 AAA domain (Cdc48 subfamily) L3475_RS06665 PF17871 AAA lid domain L3475_RS06665 PF10431 C-terminal, D2-small domain, of ClpB protein L3475_RS06675 PF00293 NUDIX domain L3475_RS06700 PF06160 Septation ring formation regulator, EzrA L3475_RS06705 PF00204 DNA gyrase B L3475_RS06705 PF01751 Toprim domain L3475_RS06705 PF00986 DNA gyrase B subunit, carboxyl terminus L3475_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS06715 PF01965 DJ-1/PfpI family L3475_RS06720 PF01098 Cell cycle protein L3475_RS06725 PF00929 Exonuclease L3475_RS06725 PF02811 PHP domain L3475_RS06725 PF14579 Helix-hairpin-helix motif L3475_RS06725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3475_RS06725 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3475_RS06725 PF11490 DNA polymerase III polC-type N-terminus II L3475_RS06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS06740 PF00512 His Kinase A (phospho-acceptor) domain L3475_RS06745 PF00486 Transcriptional regulatory protein, C terminal L3475_RS06745 PF00072 Response regulator receiver domain L3475_RS06750 PF01433 Peptidase family M1 domain L3475_RS06750 PF11838 ERAP1-like C-terminal domain L3475_RS06780 PF00248 Aldo/keto reductase family L3475_RS06800 PF01588 Putative tRNA binding domain L3475_RS06800 PF09334 tRNA synthetases class I (M) L3475_RS06805 PF12704 MacB-like periplasmic core domain L3475_RS06805 PF02687 FtsX-like permease family L3475_RS06810 PF00005 ABC transporter L3475_RS06815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L3475_RS06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3475_RS06820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3475_RS06825 PF02632 BioY family L3475_RS06835 PF02229 Transcriptional Coactivator p15 (PC4) L3475_RS06845 PF03477 ATP cone domain L3475_RS06845 PF13597 Anaerobic ribonucleoside-triphosphate reductase L3475_RS06850 PF01746 tRNA (Guanine-1)-methyltransferase L3475_RS06855 PF05239 PRC-barrel domain L3475_RS06855 PF01782 RimM N-terminal domain L3475_RS06875 PF00009 Elongation factor Tu GTP binding domain L3475_RS06875 PF03144 Elongation factor Tu domain 2 L3475_RS06875 PF03143 Elongation factor Tu C-terminal domain L3475_RS06880 PF00230 Major intrinsic protein L3475_RS06905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3475_RS06905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3475_RS06905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3475_RS06905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3475_RS06915 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3475_RS06920 PF00005 ABC transporter L3475_RS06925 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS06935 PF01594 AI-2E family transporter L3475_RS06940 PF10282 Lactonase, 7-bladed beta-propeller L3475_RS06945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain L3475_RS06945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L3475_RS06950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3475_RS06950 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3475_RS06955 PF00231 ATP synthase L3475_RS06960 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3475_RS06960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3475_RS06960 PF00306 ATP synthase alpha/beta chain, C terminal domain L3475_RS06965 PF00213 ATP synthase delta (OSCP) subunit L3475_RS06970 PF00430 ATP synthase B/B' CF(0) L3475_RS06975 PF00119 ATP synthase A chain L3475_RS06980 PF00137 ATP synthase subunit C L3475_RS06985 PF13936 Helix-turn-helix domain L3475_RS06990 PF00583 Acetyltransferase (GNAT) family L3475_RS07000 PF01272 Transcription elongation factor, GreA/GreB, C-term L3475_RS07000 PF03449 Transcription elongation factor, N-terminal L3475_RS07005 PF02618 YceG-like family L3475_RS07020 PF01225 Mur ligase family, catalytic domain L3475_RS07020 PF02875 Mur ligase family, glutamate ligase domain L3475_RS07020 PF08245 Mur ligase middle domain L3475_RS07030 PF12419 SNF2 Helicase protein L3475_RS07030 PF00176 SNF2 family N-terminal domain L3475_RS07030 PF00271 Helicase conserved C-terminal domain L3475_RS07035 PF00155 Aminotransferase class I and II L3475_RS07040 PF01053 Cys/Met metabolism PLP-dependent enzyme L3475_RS07045 PF00005 ABC transporter L3475_RS07045 PF00664 ABC transporter transmembrane region L3475_RS07060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3475_RS07065 PF14667 Polysaccharide biosynthesis C-terminal domain L3475_RS07065 PF01943 Polysaccharide biosynthesis protein L3475_RS07070 PF02875 Mur ligase family, glutamate ligase domain L3475_RS07070 PF08245 Mur ligase middle domain L3475_RS07075 PF05532 CsbD-like L3475_RS07090 PF01368 DHH family L3475_RS07090 PF02833 DHHA2 domain L3475_RS07095 PF01541 GIY-YIG catalytic domain L3475_RS07100 PF05175 Methyltransferase small domain L3475_RS07105 PF00575 S1 RNA binding domain L3475_RS07110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L3475_RS07115 PF01084 Ribosomal protein S18 L3475_RS07120 PF00436 Single-strand binding protein family L3475_RS07125 PF01250 Ribosomal protein S6 L3475_RS07130 PF00152 tRNA synthetases class II (D, K and N) L3475_RS07130 PF01336 OB-fold nucleic acid binding domain L3475_RS07140 PF00155 Aminotransferase class I and II L3475_RS07150 PF03358 NADPH-dependent FMN reductase L3475_RS07155 PF00746 LPXTG cell wall anchor motif L3475_RS07155 PF06458 MucBP domain L3475_RS07155 PF04650 YSIRK type signal peptide L3475_RS07160 PF08280 M protein trans-acting positive regulator (MGA) HTH domain L3475_RS07160 PF05043 Mga helix-turn-helix domain L3475_RS07160 PF08270 M protein trans-acting positive regulator (MGA) PRD domain L3475_RS07165 PF03883 Peroxide stress protein YaaA L3475_RS07180 PF01327 Polypeptide deformylase L3475_RS07185 PF02798 Glutathione S-transferase, N-terminal domain L3475_RS07190 PF00689 Cation transporting ATPase, C-terminus L3475_RS07190 PF00690 Cation transporter/ATPase, N-terminus L3475_RS07195 PF01545 Cation efflux family L3475_RS07195 PF16916 Dimerisation domain of Zinc Transporter L3475_RS07200 PF16326 ABC transporter C-terminal domain L3475_RS07200 PF00005 ABC transporter L3475_RS07200 PF12848 ABC transporter L3475_RS07205 PF01743 Poly A polymerase head domain L3475_RS07205 PF13735 tRNA nucleotidyltransferase domain 2 putative L3475_RS07205 PF12627 Probable RNA and SrmB- binding site of polymerase A L3475_RS07210 PF01113 Dihydrodipicolinate reductase, N-terminus L3475_RS07210 PF05173 Dihydrodipicolinate reductase, C-terminus L3475_RS07215 PF02645 Uncharacterised protein, DegV family COG1307 L3475_RS07225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3475_RS07225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3475_RS07225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3475_RS07225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3475_RS07235 PF02457 DisA bacterial checkpoint controller nucleotide-binding L3475_RS07240 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3475_RS07245 PF10298 WhiA N-terminal LAGLIDADG-like domain L3475_RS07245 PF14527 WhiA LAGLIDADG-like domain L3475_RS07245 PF02650 WhiA C-terminal HTH domain L3475_RS07250 PF01933 Uncharacterised protein family UPF0052 L3475_RS07255 PF03668 P-loop ATPase protein family L3475_RS07260 PF01042 Endoribonuclease L-PSP L3475_RS07265 PF01926 50S ribosome-binding GTPase L3475_RS07270 PF07724 AAA domain (Cdc48 subfamily) L3475_RS07270 PF10431 C-terminal, D2-small domain, of ClpB protein L3475_RS07270 PF06689 ClpX C4-type zinc finger L3475_RS07280 PF00186 Dihydrofolate reductase L3475_RS07285 PF00210 Ferritin-like domain L3475_RS07290 PF01473 Putative cell wall binding repeat L3475_RS07290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L3475_RS07290 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain L3475_RS07290 PF17890 Peptidoglycan hydrolase LytB WW-like domain L3475_RS07295 PF00121 Triosephosphate isomerase L3475_RS07300 PF07261 Replication initiation and membrane attachment L3475_RS07305 PF04204 Homoserine O-succinyltransferase L3475_RS07310 PF00156 Phosphoribosyl transferase domain L3475_RS07315 PF13649 Methyltransferase domain L3475_RS07325 PF17912 MalK OB fold domain L3475_RS07325 PF03459 TOBE domain L3475_RS07325 PF00005 ABC transporter L3475_RS07335 PF00857 Isochorismatase family L3475_RS07340 PF06018 CodY GAF-like domain L3475_RS07340 PF08222 CodY helix-turn-helix domain L3475_RS07345 PF00270 DEAD/DEAH box helicase L3475_RS07345 PF00271 Helicase conserved C-terminal domain L3475_RS07350 PF07690 Major Facilitator Superfamily L3475_RS07355 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3475_RS07355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3475_RS07360 PF08353 Domain of unknown function (DUF1727) L3475_RS07360 PF08245 Mur ligase middle domain L3475_RS07365 PF07685 CobB/CobQ-like glutamine amidotransferase domain L3475_RS07370 PF01321 Creatinase/Prolidase N-terminal domain L3475_RS07370 PF00557 Metallopeptidase family M24 L3475_RS07385 PF07155 ECF-type riboflavin transporter, S component L3475_RS07390 PF08543 Phosphomethylpyrimidine kinase L3475_RS07395 PF01416 tRNA pseudouridine synthase L3475_RS07410 PF08274 PhnA Zinc-Ribbon L3475_RS07410 PF03831 PhnA domain L3475_RS07415 PF02224 Cytidylate kinase L3475_RS07430 PF00535 Glycosyl transferase family 2 L3475_RS07435 PF16363 GDP-mannose 4,6 dehydratase L3475_RS07445 PF01266 FAD dependent oxidoreductase L3475_RS07450 PF01784 NIF3 (NGG1p interacting factor 3) L3475_RS07455 PF04816 tRNA (adenine(22)-N(1))-methyltransferase L3475_RS07475 PF00665 Integrase core domain L3475_RS07475 PF13333 Integrase core domain L3475_RS07480 PF02779 Transketolase, pyrimidine binding domain L3475_RS07480 PF00456 Transketolase, thiamine diphosphate binding domain L3475_RS07480 PF02780 Transketolase, C-terminal domain L3475_RS07485 PF00834 Ribulose-phosphate 3 epimerase family L3475_RS07490 PF02378 Phosphotransferase system, EIIC L3475_RS07490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS07495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS07520 PF01553 Acyltransferase L3475_RS07530 PF00312 Ribosomal protein S15 L3475_RS07535 PF13460 NAD(P)H-binding L3475_RS07555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3475_RS07555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3475_RS07555 PF03129 Anticodon binding domain L3475_RS07555 PF02824 TGS domain L3475_RS07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS07565 PF00072 Response regulator receiver domain L3475_RS07565 PF00486 Transcriptional regulatory protein, C terminal L3475_RS07580 PF02082 Transcriptional regulator L3475_RS07625 PF02580 D-Tyr-tRNA(Tyr) deacylase L3475_RS07630 PF13291 ACT domain L3475_RS07630 PF02824 TGS domain L3475_RS07630 PF04607 Region found in RelA / SpoT proteins L3475_RS07635 PF00753 Metallo-beta-lactamase superfamily L3475_RS07640 PF01431 Peptidase family M13 L3475_RS07640 PF05649 Peptidase family M13 L3475_RS07645 PF00005 ABC transporter L3475_RS07650 PF00950 ABC 3 transport family L3475_RS07655 PF01297 Zinc-uptake complex component A periplasmic L3475_RS07660 PF08534 Redoxin L3475_RS07670 PF00005 ABC transporter L3475_RS07670 PF02687 FtsX-like permease family L3475_RS07670 PF12704 MacB-like periplasmic core domain L3475_RS07680 PF00300 Histidine phosphatase superfamily (branch 1) L3475_RS07695 PF08264 Anticodon-binding domain of tRNA L3475_RS07695 PF00133 tRNA synthetases class I (I, L, M and V) L3475_RS07695 PF06827 Zinc finger found in FPG and IleRS L3475_RS07700 PF05103 DivIVA protein L3475_RS07715 PF04472 Cell division protein SepF L3475_RS07720 PF01168 Alanine racemase, N-terminal domain L3475_RS07725 PF12327 FtsZ family, C-terminal domain L3475_RS07725 PF00091 Tubulin/FtsZ family, GTPase domain L3475_RS07730 PF11983 Membrane-attachment and polymerisation-promoting switch L3475_RS07730 PF02491 SHS2 domain inserted in FTSA L3475_RS07740 PF00293 NUDIX domain L3475_RS07745 PF01225 Mur ligase family, catalytic domain L3475_RS07745 PF02875 Mur ligase family, glutamate ligase domain L3475_RS07745 PF08245 Mur ligase middle domain L3475_RS07750 PF01820 D-ala D-ala ligase N-terminus L3475_RS07750 PF07478 D-ala D-ala ligase C-terminus L3475_RS07755 PF02132 RecR protein L3475_RS07755 PF13662 Toprim domain L3475_RS07760 PF03717 Penicillin-binding Protein dimerisation domain L3475_RS07760 PF00905 Penicillin binding protein transpeptidase domain L3475_RS07770 PF00480 ROK family L3475_RS07775 PF00701 Dihydrodipicolinate synthetase family L3475_RS07795 PF04074 YhcH/YjgK/YiaL L3475_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS07815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3475_RS07815 PF02378 Phosphotransferase system, EIIC L3475_RS07815 PF00367 phosphotransferase system, EIIB L3475_RS07820 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase L3475_RS07825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3475_RS07825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3475_RS07830 PF02012 BNR/Asp-box repeat L3475_RS07830 PF13088 BNR repeat-like domain L3475_RS07830 PF02973 Sialidase, N-terminal domain L3475_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS07845 PF01547 Bacterial extracellular solute-binding protein L3475_RS07855 PF04650 YSIRK type signal peptide L3475_RS07855 PF02973 Sialidase, N-terminal domain L3475_RS07855 PF13088 BNR repeat-like domain L3475_RS07870 PF05448 Acetyl xylan esterase (AXE1) L3475_RS07875 PF00270 DEAD/DEAH box helicase L3475_RS07875 PF00271 Helicase conserved C-terminal domain L3475_RS07875 PF17191 RecG wedge domain L3475_RS07880 PF00842 Alanine racemase, C-terminal domain L3475_RS07880 PF01168 Alanine racemase, N-terminal domain L3475_RS07885 PF01648 4'-phosphopantetheinyl transferase superfamily L3475_RS07890 PF00793 DAHP synthetase I family L3475_RS07895 PF00793 DAHP synthetase I family L3475_RS07900 PF07517 SecA DEAD-like domain L3475_RS07900 PF07516 SecA Wing and Scaffold domain L3475_RS07900 PF01043 SecA preprotein cross-linking domain L3475_RS07900 PF02810 SEC-C motif L3475_RS07910 PF00005 ABC transporter L3475_RS07935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L3475_RS07935 PF01926 50S ribosome-binding GTPase L3475_RS07940 PF00881 Nitroreductase family L3475_RS07945 PF07319 Primosomal protein DnaI N-terminus L3475_RS07945 PF01695 IstB-like ATP binding protein L3475_RS07955 PF03477 ATP cone domain L3475_RS07960 PF00392 Bacterial regulatory proteins, gntR family L3475_RS07965 PF00005 ABC transporter L3475_RS07980 PF13732 Domain of unknown function (DUF4162) L3475_RS07980 PF00005 ABC transporter L3475_RS08000 PF00480 ROK family L3475_RS08005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3475_RS08005 PF00367 phosphotransferase system, EIIB L3475_RS08005 PF02378 Phosphotransferase system, EIIC L3475_RS08010 PF08244 Glycosyl hydrolases family 32 C terminal L3475_RS08010 PF00251 Glycosyl hydrolases family 32 N-terminal domain L3475_RS08015 PF00356 Bacterial regulatory proteins, lacI family L3475_RS08020 PF00368 Hydroxymethylglutaryl-coenzyme A reductase L3475_RS08025 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal L3475_RS08025 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal L3475_RS08050 PF03793 PASTA domain L3475_RS08050 PF00069 Protein kinase domain L3475_RS08060 PF01189 16S rRNA methyltransferase RsmB/F L3475_RS08060 PF01029 NusB family L3475_RS08065 PF02911 Formyl transferase, C-terminal domain L3475_RS08065 PF00551 Formyl transferase L3475_RS08070 PF00271 Helicase conserved C-terminal domain L3475_RS08070 PF17764 3′ DNA-binding domain (3′BD) L3475_RS08070 PF18074 Primosomal protein N C-terminal domain L3475_RS08070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L3475_RS08070 PF04851 Type III restriction enzyme, res subunit L3475_RS08075 PF01192 RNA polymerase Rpb6 L3475_RS08080 PF00625 Guanylate kinase L3475_RS08085 PF01966 HD domain L3475_RS08085 PF12072 Domain of unknown function (DUF3552) L3475_RS08085 PF00013 KH domain L3475_RS08095 PF05636 HIGH Nucleotidyl Transferase L3475_RS08100 PF13649 Methyltransferase domain L3475_RS08115 PF01966 HD domain L3475_RS08120 PF01467 Cytidylyltransferase-like L3475_RS08125 PF01985 CRS1 / YhbY (CRM) domain L3475_RS08130 PF01926 50S ribosome-binding GTPase L3475_RS08145 PF00924 Mechanosensitive ion channel L3475_RS08170 PF00085 Thioredoxin L3475_RS08175 PF14489 QueF-like protein L3475_RS08175 PF06508 Queuosine biosynthesis protein QueC L3475_RS08185 PF00230 Major intrinsic protein L3475_RS08195 PF01432 Peptidase family M3 L3475_RS08195 PF08439 Oligopeptidase F L3475_RS08200 PF04452 RNA methyltransferase L3475_RS08260 PF05496 Holliday junction DNA helicase RuvB P-loop domain L3475_RS08260 PF12002 MgsA AAA+ ATPase C terminal L3475_RS08260 PF16193 AAA C-terminal domain L3475_RS08270 PF00251 Glycosyl hydrolases family 32 N-terminal domain L3475_RS08270 PF08244 Glycosyl hydrolases family 32 C terminal L3475_RS08275 PF01547 Bacterial extracellular solute-binding protein L3475_RS08280 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08285 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08290 PF00356 Bacterial regulatory proteins, lacI family L3475_RS08290 PF13407 Periplasmic binding protein domain L3475_RS08295 PF08270 M protein trans-acting positive regulator (MGA) PRD domain L3475_RS08295 PF08280 M protein trans-acting positive regulator (MGA) HTH domain L3475_RS08295 PF05043 Mga helix-turn-helix domain L3475_RS08300 PF04226 Transglycosylase associated protein L3475_RS08315 PF03780 Asp23 family, cell envelope-related function L3475_RS08320 PF05532 CsbD-like L3475_RS08335 PF06750 Bacterial Peptidase A24 N-terminal domain L3475_RS08335 PF01478 Type IV leader peptidase family L3475_RS08355 PF00290 Tryptophan synthase alpha chain L3475_RS08360 PF00291 Pyridoxal-phosphate dependent enzyme L3475_RS08365 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase L3475_RS08370 PF00218 Indole-3-glycerol phosphate synthase L3475_RS08375 PF00591 Glycosyl transferase family, a/b domain L3475_RS08375 PF02885 Glycosyl transferase family, helical bundle domain L3475_RS08380 PF00117 Glutamine amidotransferase class-I L3475_RS08385 PF00425 chorismate binding enzyme L3475_RS08385 PF04715 Anthranilate synthase component I, N terminal region L3475_RS08395 PF00356 Bacterial regulatory proteins, lacI family L3475_RS08405 PF02308 MgtC family L3475_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08415 PF00005 ABC transporter L3475_RS08415 PF08402 TOBE domain L3475_RS08430 PF16363 GDP-mannose 4,6 dehydratase L3475_RS08435 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L3475_RS08435 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L3475_RS08440 PF01895 PhoU domain L3475_RS08450 PF12708 Pectate lyase superfamily protein L3475_RS08450 PF13229 Right handed beta helix region L3475_RS08450 PF04650 YSIRK type signal peptide L3475_RS08455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3475_RS08460 PF02397 Bacterial sugar transferase L3475_RS08465 PF00005 ABC transporter L3475_RS08465 PF00664 ABC transporter transmembrane region L3475_RS08470 PF00664 ABC transporter transmembrane region L3475_RS08470 PF00005 ABC transporter L3475_RS08485 PF03372 Endonuclease/Exonuclease/phosphatase family L3475_RS08500 PF00156 Phosphoribosyl transferase domain L3475_RS08505 PF00860 Permease family L3475_RS08510 PF14207 DpnD/PcfM-like protein L3475_RS08515 PF06044 Dam-replacing family L3475_RS08515 PF17726 Dam-replacing HTH domain L3475_RS08525 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L3475_RS08525 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L3475_RS08530 PF10509 Galactokinase galactose-binding signature L3475_RS08530 PF00288 GHMP kinases N terminal domain L3475_RS08530 PF08544 GHMP kinases C terminal L3475_RS08535 PF00356 Bacterial regulatory proteins, lacI family L3475_RS08540 PF08240 Alcohol dehydrogenase GroES-like domain L3475_RS08540 PF00107 Zinc-binding dehydrogenase L3475_RS08545 PF13411 MerR HTH family regulatory protein L3475_RS08550 PF01545 Cation efflux family L3475_RS08560 PF04973 Nicotinamide mononucleotide transporter L3475_RS08565 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08570 PF00005 ABC transporter L3475_RS08570 PF00571 CBS domain L3475_RS08590 PF05343 M42 glutamyl aminopeptidase L3475_RS08595 PF01370 NAD dependent epimerase/dehydratase family L3475_RS08605 PF01032 FecCD transport family L3475_RS08610 PF01032 FecCD transport family L3475_RS08615 PF00005 ABC transporter L3475_RS08620 PF01497 Periplasmic binding protein L3475_RS08625 PF01809 Putative membrane protein insertion efficiency factor L3475_RS08630 PF00849 RNA pseudouridylate synthase L3475_RS08630 PF01479 S4 domain L3475_RS08635 PF04079 Segregation and condensation complex subunit ScpB L3475_RS08640 PF02616 Segregation and condensation protein ScpA L3475_RS08645 PF02899 Phage integrase, N-terminal SAM-like domain L3475_RS08645 PF00589 Phage integrase family L3475_RS08660 PF01725 Ham1 family L3475_RS08665 PF01177 Asp/Glu/Hydantoin racemase L3475_RS08670 PF03672 Uncharacterised protein family (UPF0154) L3475_RS08675 PF00128 Alpha amylase, catalytic domain L3475_RS08675 PF16657 Maltogenic Amylase, C-terminal domain L3475_RS08680 PF00367 phosphotransferase system, EIIB L3475_RS08680 PF02378 Phosphotransferase system, EIIC L3475_RS08685 PF00392 Bacterial regulatory proteins, gntR family L3475_RS08685 PF07702 UTRA domain L3475_RS08705 PF00005 ABC transporter L3475_RS08705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3475_RS08710 PF00005 ABC transporter L3475_RS08710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3475_RS08715 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08715 PF12911 N-terminal TM domain of oligopeptide transport permease C L3475_RS08720 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3475_RS08735 PF00128 Alpha amylase, catalytic domain L3475_RS08745 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08750 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS08755 PF01547 Bacterial extracellular solute-binding protein L3475_RS08760 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3475_RS08760 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3475_RS08765 PF02311 AraC-like ligand binding domain L3475_RS08765 PF12833 Helix-turn-helix domain L3475_RS08770 PF02237 Biotin protein ligase C terminal domain L3475_RS08770 PF03099 Biotin/lipoate A/B protein ligase family L3475_RS08885 PF01938 TRAM domain L3475_RS08885 PF05958 tRNA (Uracil-5-)-methyltransferase L3475_RS08890 PF02631 RecX family L3475_RS08895 PF04167 Protein of unknown function (DUF402) L3475_RS08910 PF01209 ubiE/COQ5 methyltransferase family L3475_RS08920 PF00118 TCP-1/cpn60 chaperonin family L3475_RS08925 PF00166 Chaperonin 10 Kd subunit L3475_RS08930 PF00436 Single-strand binding protein family L3475_RS08935 PF00106 short chain dehydrogenase L3475_RS08940 PF14794 Domain of unknown function (DUF4479) L3475_RS08940 PF01588 Putative tRNA binding domain L3475_RS08945 PF00085 Thioredoxin L3475_RS08985 PF00005 ABC transporter L3475_RS08985 PF00664 ABC transporter transmembrane region L3475_RS09000 PF01709 Transcriptional regulator L3475_RS09005 PF01289 Thiol-activated cytolysin L3475_RS09005 PF17440 Thiol-activated cytolysin beta sandwich domain L3475_RS09040 PF00005 ABC transporter L3475_RS09040 PF08402 TOBE domain L3475_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS09050 PF02308 MgtC family L3475_RS09060 PF00356 Bacterial regulatory proteins, lacI family L3475_RS09110 PF01510 N-acetylmuramoyl-L-alanine amidase L3475_RS09110 PF01473 Putative cell wall binding repeat L3475_RS09120 PF00154 recA bacterial DNA recombination protein L3475_RS09125 PF02464 Competence-damaged protein L3475_RS09125 PF18146 Damage-inducible protein CinA KH domain L3475_RS09125 PF00994 Probable molybdopterin binding domain L3475_RS09130 PF03816 Cell envelope-related transcriptional attenuator domain L3475_RS09140 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE L3475_RS09160 PF06125 Bacterial protein of unknown function (DUF961) L3475_RS09180 PF02486 Replication initiation factor L3475_RS09180 PF18106 Rolling Circle replication initiation protein N-terminal domain L3475_RS09190 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) L3475_RS09195 PF00398 Ribosomal RNA adenine dimethylase L3475_RS09230 PF00877 NlpC/P60 family L3475_RS09245 PF00679 Elongation factor G C-terminus L3475_RS09245 PF14492 Elongation Factor G, domain II L3475_RS09245 PF03764 Elongation factor G, domain IV L3475_RS09245 PF00009 Elongation factor Tu GTP binding domain L3475_RS09270 PF00005 ABC transporter L3475_RS09270 PF12848 ABC transporter L3475_RS09275 PF07690 Major Facilitator Superfamily L3475_RS09310 PF09035 Excisionase from transposon Tn916 L3475_RS09315 PF00589 Phage integrase family L3475_RS09315 PF02920 DNA binding domain of tn916 integrase L3475_RS09330 PF02687 FtsX-like permease family L3475_RS09330 PF12704 MacB-like periplasmic core domain L3475_RS09330 PF00005 ABC transporter L3475_RS09335 PF00334 Nucleoside diphosphate kinase L3475_RS09340 PF04998 RNA polymerase Rpb1, domain 5 L3475_RS09340 PF05000 RNA polymerase Rpb1, domain 4 L3475_RS09340 PF00623 RNA polymerase Rpb1, domain 2 L3475_RS09340 PF04997 RNA polymerase Rpb1, domain 1 L3475_RS09340 PF04983 RNA polymerase Rpb1, domain 3 L3475_RS09345 PF04561 RNA polymerase Rpb2, domain 2 L3475_RS09345 PF04565 RNA polymerase Rpb2, domain 3 L3475_RS09345 PF10385 RNA polymerase beta subunit external 1 domain L3475_RS09345 PF04560 RNA polymerase Rpb2, domain 7 L3475_RS09345 PF04563 RNA polymerase beta subunit L3475_RS09345 PF00562 RNA polymerase Rpb2, domain 6 L3475_RS09355 PF00571 CBS domain L3475_RS09355 PF01595 Cyclin M transmembrane N-terminal domain L3475_RS09355 PF03471 Transporter associated domain L3475_RS09360 PF01223 DNA/RNA non-specific endonuclease L3475_RS09365 PF11772 DNA-directed RNA polymerase subunit beta L3475_RS09370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3475_RS09380 PF05362 Lon protease (S16) C-terminal proteolytic domain L3475_RS09380 PF13180 PDZ domain L3475_RS09385 PF01467 Cytidylyltransferase-like L3475_RS09395 PF03590 Aspartate-ammonia ligase L3475_RS09400 PF01027 Inhibitor of apoptosis-promoting Bax1 L3475_RS09405 PF08032 RNA 2'-O ribose methyltransferase substrate binding L3475_RS09405 PF00588 SpoU rRNA Methylase family L3475_RS09410 PF00708 Acylphosphatase L3475_RS09415 PF02096 60Kd inner membrane protein L3475_RS09420 PF04055 Radical SAM superfamily L3475_RS09425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L3475_RS09425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3475_RS09430 PF00156 Phosphoribosyl transferase domain L3475_RS09430 PF09182 Bacterial purine repressor, N-terminal L3475_RS09435 PF01966 HD domain L3475_RS09435 PF01336 OB-fold nucleic acid binding domain L3475_RS09440 PF02646 RmuC family L3475_RS09445 PF04263 Thiamin pyrophosphokinase, catalytic domain L3475_RS09445 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain L3475_RS09450 PF00834 Ribulose-phosphate 3 epimerase family L3475_RS09455 PF03193 RsgA GTPase L3475_RS09455 PF16745 RsgA N-terminal domain L3475_RS09460 PF00398 Ribosomal RNA adenine dimethylase L3475_RS09470 PF12704 MacB-like periplasmic core domain L3475_RS09470 PF02687 FtsX-like permease family L3475_RS09470 PF00005 ABC transporter L3475_RS09485 PF13662 Toprim domain L3475_RS09485 PF13331 Domain of unknown function (DUF4093) L3475_RS09490 PF01026 TatD related DNase L3475_RS09500 PF00468 Ribosomal protein L34 L3475_RS09505 PF00155 Aminotransferase class I and II L3475_RS09515 PF00582 Universal stress protein family L3475_RS09525 PF17763 Glutaminase/Asparaginase C-terminal domain L3475_RS09525 PF00710 Asparaginase, N-terminal L3475_RS09535 PF00356 Bacterial regulatory proteins, lacI family L3475_RS09540 PF00196 Bacterial regulatory proteins, luxR family L3475_RS09540 PF00072 Response regulator receiver domain L3475_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS09545 PF07730 Histidine kinase L3475_RS09555 PF00005 ABC transporter L3475_RS09650 PF02357 Transcription termination factor nusG L3475_RS09650 PF00467 KOW motif L3475_RS09660 PF00471 Ribosomal protein L33 L3475_RS09665 PF00905 Penicillin binding protein transpeptidase domain L3475_RS09665 PF00912 Transglycosylase L3475_RS09670 PF00849 RNA pseudouridylate synthase L3475_RS09675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3475_RS09675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3475_RS09680 PF12704 MacB-like periplasmic core domain L3475_RS09680 PF02687 FtsX-like permease family L3475_RS09690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L3475_RS09690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L3475_RS09705 PF00005 ABC transporter L3475_RS09710 PF00392 Bacterial regulatory proteins, gntR family L3475_RS09710 PF07702 UTRA domain L3475_RS09715 PF00232 Glycosyl hydrolase family 1 L3475_RS09720 PF02378 Phosphotransferase system, EIIC L3475_RS09725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS09730 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3475_RS09735 PF00171 Aldehyde dehydrogenase family L3475_RS09735 PF00465 Iron-containing alcohol dehydrogenase L3475_RS09745 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3475_RS09755 PF02780 Transketolase, C-terminal domain L3475_RS09755 PF00456 Transketolase, thiamine diphosphate binding domain L3475_RS09755 PF02779 Transketolase, pyrimidine binding domain L3475_RS09770 PF00596 Class II Aldolase and Adducin N-terminal domain L3475_RS09775 PF01261 Xylose isomerase-like TIM barrel L3475_RS09780 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L3475_RS09785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3475_RS09790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3475_RS09795 PF03611 PTS system sugar-specific permease component L3475_RS09805 PF01424 R3H domain L3475_RS09805 PF14804 Jag N-terminus L3475_RS09810 PF02096 60Kd inner membrane protein L3475_RS09815 PF00825 Ribonuclease P L3475_RS09825 PF00871 Acetokinase family L3475_RS09835 PF01209 ubiE/COQ5 methyltransferase family L3475_RS09860 PF07963 Prokaryotic N-terminal methylation motif L3475_RS09865 PF00482 Type II secretion system (T2SS), protein F L3475_RS09870 PF00437 Type II/IV secretion system protein L3475_RS09880 PF13823 Alcohol dehydrogenase GroES-associated L3475_RS09880 PF00107 Zinc-binding dehydrogenase L3475_RS09880 PF08240 Alcohol dehydrogenase GroES-like domain L3475_RS09885 PF01979 Amidohydrolase family L3475_RS09890 PF01757 Acyltransferase family L3475_RS09895 PF01702 Queuine tRNA-ribosyltransferase L3475_RS09905 PF01470 Pyroglutamyl peptidase L3475_RS09910 PF06993 Protein of unknown function (DUF1304) L3475_RS09930 PF00475 Imidazoleglycerol-phosphate dehydratase L3475_RS09930 PF08645 Polynucleotide kinase 3 phosphatase L3475_RS09935 PF01554 MatE L3475_RS09940 PF00291 Pyridoxal-phosphate dependent enzyme L3475_RS09940 PF14821 Threonine synthase N terminus L3475_RS10030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3475_RS10035 PF00749 tRNA synthetases class I (E and Q), catalytic domain L3475_RS10040 PF00342 Phosphoglucose isomerase L3475_RS10050 PF07722 Peptidase C26 L3475_RS10055 PF00664 ABC transporter transmembrane region L3475_RS10055 PF00005 ABC transporter L3475_RS10065 PF00005 ABC transporter L3475_RS10065 PF00664 ABC transporter transmembrane region L3475_RS10070 PF00488 MutS domain V L3475_RS10070 PF05190 MutS family domain IV L3475_RS10070 PF05192 MutS domain III L3475_RS10070 PF05188 MutS domain II L3475_RS10070 PF01624 MutS domain I L3475_RS10075 PF02863 Arginine repressor, C-terminal domain L3475_RS10075 PF01316 Arginine repressor, DNA binding domain L3475_RS10080 PF05746 DALR anticodon binding domain L3475_RS10080 PF00750 tRNA synthetases class I (R) L3475_RS10080 PF03485 Arginyl tRNA synthetase N terminal domain L3475_RS10095 PF00486 Transcriptional regulatory protein, C terminal L3475_RS10095 PF00072 Response regulator receiver domain L3475_RS10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS10100 PF00512 His Kinase A (phospho-acceptor) domain L3475_RS10100 PF00989 PAS fold L3475_RS10100 PF16736 Single Cache-like L3475_RS10105 PF12849 PBP superfamily domain L3475_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS10120 PF00005 ABC transporter L3475_RS10125 PF01895 PhoU domain L3475_RS10145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L3475_RS10145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L3475_RS10150 PF00483 Nucleotidyl transferase L3475_RS10160 PF01812 5-formyltetrahydrofolate cyclo-ligase family L3475_RS10165 PF07687 Peptidase dimerisation domain L3475_RS10165 PF01546 Peptidase family M20/M25/M40 L3475_RS10170 PF14602 Hexapeptide repeat of succinyl-transferase L3475_RS10170 PF00132 Bacterial transferase hexapeptide (six repeats) L3475_RS10170 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal L3475_RS10175 PF00892 EamA-like transporter family L3475_RS10180 PF00912 Transglycosylase L3475_RS10180 PF00905 Penicillin binding protein transpeptidase domain L3475_RS10185 PF00579 tRNA synthetases class I (W and Y) L3475_RS10185 PF01479 S4 domain L3475_RS10190 PF00403 Heavy-metal-associated domain L3475_RS10200 PF13847 Methyltransferase domain L3475_RS10210 PF00343 Carbohydrate phosphorylase L3475_RS10215 PF02446 4-alpha-glucanotransferase L3475_RS10220 PF13416 Bacterial extracellular solute-binding protein L3475_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS10240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L3475_RS10240 PF00356 Bacterial regulatory proteins, lacI family L3475_RS10245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L3475_RS10245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L3475_RS10250 PF01336 OB-fold nucleic acid binding domain L3475_RS10250 PF00152 tRNA synthetases class II (D, K and N) L3475_RS10250 PF02938 GAD domain L3475_RS10280 PF01381 Helix-turn-helix L3475_RS10295 PF13393 Histidyl-tRNA synthetase L3475_RS10295 PF03129 Anticodon binding domain L3475_RS10305 PF01381 Helix-turn-helix L3475_RS10310 PF01883 Iron-sulfur cluster assembly protein L3475_RS10320 PF00920 Dehydratase family L3475_RS10325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L3475_RS10325 PF02779 Transketolase, pyrimidine binding domain L3475_RS10325 PF02780 Transketolase, C-terminal domain L3475_RS10330 PF00456 Transketolase, thiamine diphosphate binding domain L3475_RS10335 PF03611 PTS system sugar-specific permease component L3475_RS10345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3475_RS10360 PF01783 Ribosomal L32p protein family L3475_RS10365 PF00471 Ribosomal protein L33 L3475_RS10395 PF00480 ROK family L3475_RS10400 PF01074 Glycosyl hydrolases family 38 N-terminal domain L3475_RS10400 PF07748 Glycosyl hydrolases family 38 C-terminal domain L3475_RS10400 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 L3475_RS10400 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain L3475_RS10400 PF09261 Alpha mannosidase middle domain L3475_RS10410 PF17678 Glycosyl hydrolase family 92 N-terminal domain L3475_RS10410 PF07971 Glycosyl hydrolase family 92 L3475_RS10425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3475_RS10425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3475_RS10430 PF00696 Amino acid kinase family L3475_RS10435 PF03606 C4-dicarboxylate anaerobic carrier L3475_RS10440 PF01546 Peptidase family M20/M25/M40 L3475_RS10445 PF07501 G5 domain L3475_RS10445 PF07581 The GLUG motif L3475_RS10445 PF00746 LPXTG cell wall anchor motif L3475_RS10445 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region L3475_RS10445 PF04650 YSIRK type signal peptide L3475_RS10445 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region L3475_RS10450 PF04650 YSIRK type signal peptide L3475_RS10450 PF00746 LPXTG cell wall anchor motif L3475_RS10450 PF00728 Glycosyl hydrolase family 20, catalytic domain L3475_RS10450 PF07501 G5 domain L3475_RS10465 PF00465 Iron-containing alcohol dehydrogenase L3475_RS10470 PF07882 L-fucose isomerase, second N-terminal domain L3475_RS10470 PF02952 L-fucose isomerase, C-terminal domain L3475_RS10470 PF07881 L-fucose isomerase, first N-terminal domain L3475_RS10475 PF08305 NPCBM/NEW2 domain L3475_RS10475 PF08306 Glycosyl hydrolase family 98 L3475_RS10475 PF08307 Glycosyl hydrolase family 98 C-terminal domain L3475_RS10485 PF03613 PTS system mannose/fructose/sorbose family IID component L3475_RS10495 PF03830 PTS system sorbose subfamily IIB component L3475_RS10505 PF05025 RbsD / FucU transport protein family L3475_RS10510 PF00596 Class II Aldolase and Adducin N-terminal domain L3475_RS10515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3475_RS10515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3475_RS10520 PF00455 DeoR C terminal sensor domain L3475_RS10520 PF08220 DeoR-like helix-turn-helix domain L3475_RS10525 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment L3475_RS10525 PF01297 Zinc-uptake complex component A periplasmic L3475_RS10530 PF00950 ABC 3 transport family L3475_RS10535 PF00005 ABC transporter L3475_RS10540 PF01047 MarR family L3475_RS10545 PF04914 DltD protein L3475_RS10550 PF00550 Phosphopantetheine attachment site L3475_RS10555 PF03062 MBOAT, membrane-bound O-acyltransferase family L3475_RS10560 PF00501 AMP-binding enzyme L3475_RS10560 PF13193 AMP-binding enzyme C-terminal domain L3475_RS10570 PF07690 Major Facilitator Superfamily L3475_RS10590 PF00230 Major intrinsic protein L3475_RS10595 PF01266 FAD dependent oxidoreductase L3475_RS10595 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L3475_RS10600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3475_RS10600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3475_RS10610 PF01430 Hsp33 protein L3475_RS10615 PF01207 Dihydrouridine synthase (Dus) L3475_RS10620 PF16828 GAG-binding domain on surface antigen L3475_RS10620 PF00746 LPXTG cell wall anchor motif L3475_RS10620 PF05062 RICH domain L3475_RS10620 PF04650 YSIRK type signal peptide L3475_RS10635 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family L3475_RS10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3475_RS10640 PF00672 HAMP domain L3475_RS10640 PF00512 His Kinase A (phospho-acceptor) domain L3475_RS10645 PF00072 Response regulator receiver domain L3475_RS10645 PF00486 Transcriptional regulatory protein, C terminal L3475_RS10650 PF10431 C-terminal, D2-small domain, of ClpB protein L3475_RS10650 PF02861 Clp amino terminal domain, pathogenicity island component L3475_RS10650 PF07724 AAA domain (Cdc48 subfamily) L3475_RS10650 PF00004 ATPase family associated with various cellular activities (AAA) L3475_RS10650 PF17871 AAA lid domain L3475_RS10655 PF05848 CtsR N-terminal HTH domain L3475_RS10655 PF17727 CtsR C-terminal dimerization domain L3475_RS10660 PF00005 ABC transporter L3475_RS10665 PF09084 NMT1/THI5 like L3475_RS10670 PF00528 Binding-protein-dependent transport system inner membrane component L3475_RS10690 PF00772 DnaB-like helicase N terminal domain L3475_RS10690 PF03796 DnaB-like helicase C terminal domain L3475_RS10695 PF03948 Ribosomal protein L9, C-terminal domain L3475_RS10695 PF01281 Ribosomal protein L9, N-terminal domain L3475_RS10700 PF01368 DHH family L3475_RS10700 PF02272 DHHA1 domain L3475_RS10705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L3475_RS10705 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L3475_RS10715 PF00271 Helicase conserved C-terminal domain L3475_RS10715 PF04851 Type III restriction enzyme, res subunit L3475_RS10720 PF09186 Domain of unknown function (DUF1949) L3475_RS10720 PF01205 Uncharacterized protein family UPF0029 L3475_RS10725 PF00291 Pyridoxal-phosphate dependent enzyme L3475_RS10745 PF00889 Elongation factor TS L3475_RS10750 PF00318 Ribosomal protein S2 L3475_RS10755 PF05257 CHAP domain L3475_RS10755 PF01476 LysM domain L3475_RS10765 PF04085 rod shape-determining protein MreC L3475_RS10770 PF02361 Cobalt transport protein L3475_RS10775 PF00005 ABC transporter L3475_RS10780 PF00005 ABC transporter L3475_RS10785 PF01066 CDP-alcohol phosphatidyltransferase L3475_RS10795 PF00675 Insulinase (Peptidase family M16) L3475_RS10795 PF05193 Peptidase M16 inactive domain L3475_RS10800 PF00675 Insulinase (Peptidase family M16) L3475_RS10800 PF05193 Peptidase M16 inactive domain L3475_RS10810 PF02463 RecF/RecN/SMC N terminal domain L3475_RS10815 PF00571 CBS domain L3475_RS10815 PF00478 IMP dehydrogenase / GMP reductase domain L3475_RS10820 PF00579 tRNA synthetases class I (W and Y) L3475_RS10825 PF00005 ABC transporter L3475_RS10825 PF12848 ABC transporter L3475_RS10870 PF03047 COMC family L3475_RS10880 PF02590 Predicted SPOUT methyltransferase L3475_RS10885 PF13180 PDZ domain L3475_RS10890 PF17762 HTH domain found in ParB protein L3475_RS10890 PF02195 ParB-like nuclease domain