C4N11_RS00005	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
C4N11_RS00010	SM00480	DNA polymerase III beta subunit
C4N11_RS00030	SM00487	DEAD-like helicases superfamily
C4N11_RS00030	SM00490	helicase superfamily c-terminal domain
C4N11_RS00030	SM00982	C4N11_RS00030
C4N11_RS00030	SM01058	CarD-like/TRCF domain
C4N11_RS00035	SM00363	S4 RNA-binding domain
C4N11_RS00050	SM00977	TilS substrate C-terminal domain
C4N11_RS00060	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00120	SM00788	Adenylosuccinate synthetase
C4N11_RS00165	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS00200	SM00855	Phosphoglycerate mutase family
C4N11_RS00205	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00210	SM00947	Carbonic anhydrase
C4N11_RS00220	SM01400	C4N11_RS00220
C4N11_RS00235	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C4N11_RS00235	SM00474	3'-5' exonuclease
C4N11_RS00235	SM00475	5'-3' exonuclease
C4N11_RS00235	SM00482	DNA polymerase A domain
C4N11_RS00240	SM00881	CoA binding domain
C4N11_RS00285	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00300	SM01211	C4N11_RS00300
C4N11_RS00325	SM00798	AICARFT/IMPCHase bienzyme
C4N11_RS00325	SM00851	MGS-like domain
C4N11_RS00330	SM01209	C4N11_RS00330
C4N11_RS00330	SM01210	C4N11_RS00330
C4N11_RS00345	SM01001	AIR carboxylase
C4N11_RS00360	SM00998	Adenylosuccinate lyase C-terminus
C4N11_RS00365	SM01208	C4N11_RS00365
C4N11_RS00370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C4N11_RS00370	SM00866	C4N11_RS00370
C4N11_RS00425	SM00450	Rhodanese Homology Domain
C4N11_RS00480	SM00448	cheY-homologous receiver domain
C4N11_RS00480	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS00485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C4N11_RS00485	SM00387	Histidine kinase-like ATPases
C4N11_RS00485	SM00388	His Kinase A (phosphoacceptor) domain
C4N11_RS00490	SM00363	S4 RNA-binding domain
C4N11_RS00490	SM01390	C4N11_RS00490
C4N11_RS00530	SM00450	Rhodanese Homology Domain
C4N11_RS00605	SM00257	Lysin motif
C4N11_RS00625	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00630	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS00630	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C4N11_RS00695	SM01228	C4N11_RS00695
C4N11_RS00700	SM00849	Metallo-beta-lactamase superfamily
C4N11_RS00780	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00800	SM00984	UDP binding domain
C4N11_RS00805	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS00835	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS00850	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS00850	SM00930	C4N11_RS00850
C4N11_RS00875	SM00342	helix_turn_helix, arabinose operon control protein
C4N11_RS00875	SM00448	cheY-homologous receiver domain
C4N11_RS00905	SM00850	LytTr DNA-binding domain
C4N11_RS00915	SM00853	MutL C terminal dimerisation domain
C4N11_RS00915	SM01340	C4N11_RS00915
C4N11_RS00940	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C4N11_RS00970	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS01000	SM00732	Likely ribonuclease with RNase H fold.
C4N11_RS01020	SM00155	Phospholipase D. Active site motifs.
C4N11_RS01060	SM01403	C4N11_RS01060
C4N11_RS01080	SM01382	C4N11_RS01080
C4N11_RS01080	SM01383	C4N11_RS01080
C4N11_RS01095	SM00322	K homology RNA-binding domain
C4N11_RS01115	SM01374	C4N11_RS01115
C4N11_RS01120	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C4N11_RS01175	SM00316	Ribosomal protein S1-like RNA-binding domain
C4N11_RS01195	SM00662	RNA polymerases D
C4N11_RS01215	SM00855	Phosphoglycerate mutase family
C4N11_RS01235	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS01245	SM00342	helix_turn_helix, arabinose operon control protein
C4N11_RS01255	SM00420	helix_turn_helix, Deoxyribose operon repressor
C4N11_RS01255	SM01134	C4N11_RS01255
C4N11_RS01315	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS01360	SM00642	Alpha-amylase domain
C4N11_RS01380	SM00838	Elongation factor G C-terminus
C4N11_RS01380	SM00889	Elongation factor G, domain IV
C4N11_RS01385	SM00479	C4N11_RS01385
C4N11_RS01385	SM00481	DNA polymerase alpha chain like domain
C4N11_RS01425	SM00363	S4 RNA-binding domain
C4N11_RS01455	SM00829	Enoylreductase
C4N11_RS01490	SM00905	Dihydroneopterin aldolase
C4N11_RS01595	SM01323	C4N11_RS01595
C4N11_RS01605	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS01620	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS01635	SM00740	C4N11_RS01635
C4N11_RS01645	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS01645	SM01086	C-terminal, D2-small domain, of ClpB protein
C4N11_RS01665	SM00642	Alpha-amylase domain
C4N11_RS01825	SM00981	C4N11_RS01825
C4N11_RS01835	SM01350	C4N11_RS01835
C4N11_RS01840	SM00448	cheY-homologous receiver domain
C4N11_RS01840	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS01900	SM00387	Histidine kinase-like ATPases
C4N11_RS01905	SM00421	helix_turn_helix, Lux Regulon
C4N11_RS01905	SM00448	cheY-homologous receiver domain
C4N11_RS02000	SM00463	Small MutS-related domain
C4N11_RS02000	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C4N11_RS02000	SM00534	ATPase domain of DNA mismatch repair MUTS family
C4N11_RS02045	SM00347	helix_turn_helix multiple antibiotic resistance protein
C4N11_RS02065	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C4N11_RS02070	SM00822	C4N11_RS02070
C4N11_RS02075	SM00825	Beta-ketoacyl synthase
C4N11_RS02090	SM00878	Biotin carboxylase C-terminal domain
C4N11_RS02130	SM00841	Elongation factor P, C-terminal
C4N11_RS02130	SM01185	C4N11_RS02130
C4N11_RS02135	SM00845	GatB domain
C4N11_RS02170	SM01120	C4N11_RS02170
C4N11_RS02170	SM01121	C4N11_RS02170
C4N11_RS02215	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS02220	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS02300	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS02320	SM00014	Acid phosphatase homologues
C4N11_RS02350	SM01208	C4N11_RS02350
C4N11_RS02365	SM00422	helix_turn_helix, mercury resistance
C4N11_RS02370	SM01230	C4N11_RS02370
C4N11_RS02415	SM00487	DEAD-like helicases superfamily
C4N11_RS02450	SM00271	DnaJ molecular chaperone homology domain
C4N11_RS02475	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS02495	SM00850	LytTr DNA-binding domain
C4N11_RS02500	SM00448	cheY-homologous receiver domain
C4N11_RS02500	SM00850	LytTr DNA-binding domain
C4N11_RS02615	SM00322	K homology RNA-binding domain
C4N11_RS02715	SM00487	DEAD-like helicases superfamily
C4N11_RS02715	SM00490	helicase superfamily c-terminal domain
C4N11_RS02720	SM01061	CAT RNA binding domain
C4N11_RS02745	SM00873	B3/4 domain
C4N11_RS02745	SM00874	tRNA synthetase B5 domain
C4N11_RS02745	SM00896	Ferredoxin-fold anticodon binding domain
C4N11_RS02760	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS02780	SM00316	Ribosomal protein S1-like RNA-binding domain
C4N11_RS02780	SM00322	K homology RNA-binding domain
C4N11_RS02800	SM00840	C4N11_RS02800
C4N11_RS02835	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS02845	SM00448	cheY-homologous receiver domain
C4N11_RS02845	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS02850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C4N11_RS02850	SM00387	Histidine kinase-like ATPases
C4N11_RS02850	SM00388	His Kinase A (phosphoacceptor) domain
C4N11_RS02875	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS02880	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS02890	SM00849	Metallo-beta-lactamase superfamily
C4N11_RS02915	SM00465	GIY-YIG type nucleases (URI domain)
C4N11_RS02925	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS02940	SM00986	Uracil DNA glycosylase superfamily
C4N11_RS02940	SM00987	UreE urease accessory protein, C-terminal domain 
C4N11_RS02975	SM00649	Ribosomal protein L11/L12
C4N11_RS02995	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03050	SM01208	C4N11_RS03050
C4N11_RS03105	SM00342	helix_turn_helix, arabinose operon control protein
C4N11_RS03105	SM00448	cheY-homologous receiver domain
C4N11_RS03110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C4N11_RS03110	SM00387	Histidine kinase-like ATPases
C4N11_RS03190	SM00450	Rhodanese Homology Domain
C4N11_RS03205	SM00838	Elongation factor G C-terminus
C4N11_RS03225	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03245	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C4N11_RS03275	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03280	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS03285	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03350	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03500	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03505	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03510	SM00116	Domain in cystathionine beta-synthase and other proteins.
C4N11_RS03520	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03540	SM00487	DEAD-like helicases superfamily
C4N11_RS03540	SM00490	helicase superfamily c-terminal domain
C4N11_RS03585	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03680	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03700	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03760	SM01022	C4N11_RS03760
C4N11_RS03775	SM00448	cheY-homologous receiver domain
C4N11_RS03775	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS03780	SM00387	Histidine kinase-like ATPases
C4N11_RS03780	SM00388	His Kinase A (phosphoacceptor) domain
C4N11_RS03795	SM00479	C4N11_RS03795
C4N11_RS03795	SM00487	DEAD-like helicases superfamily
C4N11_RS03795	SM00491	C4N11_RS03795
C4N11_RS03815	SM00387	Histidine kinase-like ATPases
C4N11_RS03815	SM00433	TopoisomeraseII
C4N11_RS03860	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03860	SM01086	C-terminal, D2-small domain, of ClpB protein
C4N11_RS03875	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS03970	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
C4N11_RS03975	SM01133	C4N11_RS03975
C4N11_RS03990	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS04010	SM01207	C4N11_RS04010
C4N11_RS04015	SM00387	Histidine kinase-like ATPases
C4N11_RS04015	SM00433	TopoisomeraseII
C4N11_RS04020	SM00434	DNA Topoisomerase IV
C4N11_RS04065	SM00316	Ribosomal protein S1-like RNA-binding domain
C4N11_RS04080	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS04090	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS04115	SM00936	Penicillin-binding protein 5, C-terminal domain 
C4N11_RS04135	SM00420	helix_turn_helix, Deoxyribose operon repressor
C4N11_RS04135	SM01134	C4N11_RS04135
C4N11_RS04150	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS04150	SM00843	C4N11_RS04150
C4N11_RS04170	SM00981	C4N11_RS04170
C4N11_RS04220	SM00487	DEAD-like helicases superfamily
C4N11_RS04230	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
C4N11_RS04230	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
C4N11_RS04235	SM00481	DNA polymerase alpha chain like domain
C4N11_RS04315	SM00316	Ribosomal protein S1-like RNA-binding domain
C4N11_RS04315	SM00732	Likely ribonuclease with RNase H fold.
C4N11_RS04320	SM00731	SprT homologues.
C4N11_RS04335	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS04425	SM00363	S4 RNA-binding domain
C4N11_RS04430	SM00849	Metallo-beta-lactamase superfamily
C4N11_RS04435	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C4N11_RS04545	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C4N11_RS04550	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C4N11_RS04560	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C4N11_RS04575	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS04615	SM00047	Lysozyme subfamily 2
C4N11_RS04640	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C4N11_RS04640	SM01232	C4N11_RS04640
C4N11_RS04665	SM00316	Ribosomal protein S1-like RNA-binding domain
C4N11_RS04665	SM00955	C4N11_RS04665
C4N11_RS04715	SM00855	Phosphoglycerate mutase family
C4N11_RS04760	SM00479	C4N11_RS04760
C4N11_RS04870	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C4N11_RS04875	SM01130	C4N11_RS04875
C4N11_RS04895	SM00937	C4N11_RS04895
C4N11_RS04970	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05015	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C4N11_RS05020	SM00642	Alpha-amylase domain
C4N11_RS05035	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS05090	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05100	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05115	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS05150	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05155	SM00400	zinc finger
C4N11_RS05155	SM00493	C4N11_RS05155
C4N11_RS05210	SM00116	Domain in cystathionine beta-synthase and other proteins.
C4N11_RS05245	SM00881	CoA binding domain
C4N11_RS05265	SM01400	C4N11_RS05265
C4N11_RS05270	SM01118	C4N11_RS05270
C4N11_RS05275	SM00954	Region found in RelA / SpoT proteins
C4N11_RS05330	SM00904	Riboflavin kinase
C4N11_RS05345	SM00411	bacterial (prokaryotic) histone like domain
C4N11_RS05350	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05365	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C4N11_RS05365	SM00292	breast cancer carboxy-terminal domain
C4N11_RS05365	SM00532	Ligase N family
C4N11_RS05370	SM00642	Alpha-amylase domain
C4N11_RS05385	SM00642	Alpha-amylase domain
C4N11_RS05420	SM01192	C4N11_RS05420
C4N11_RS05420	SM01193	C4N11_RS05420
C4N11_RS05465	SM01208	C4N11_RS05465
C4N11_RS05470	SM01208	C4N11_RS05470
C4N11_RS05510	SM00861	Transketolase, pyrimidine binding domain
C4N11_RS05540	SM00986	Uracil DNA glycosylase superfamily
C4N11_RS05540	SM00987	UreE urease accessory protein, C-terminal domain 
C4N11_RS05595	SM00420	helix_turn_helix, Deoxyribose operon repressor
C4N11_RS05595	SM01134	C4N11_RS05595
C4N11_RS05620	SM01061	CAT RNA binding domain
C4N11_RS05625	SM01133	C4N11_RS05625
C4N11_RS05665	SM00838	Elongation factor G C-terminus
C4N11_RS05685	SM00363	S4 RNA-binding domain
C4N11_RS05745	SM00434	DNA Topoisomerase IV
C4N11_RS05770	SM00849	Metallo-beta-lactamase superfamily
C4N11_RS05775	SM00091	PAS domain
C4N11_RS05775	SM00387	Histidine kinase-like ATPases
C4N11_RS05775	SM00388	His Kinase A (phosphoacceptor) domain
C4N11_RS05780	SM00448	cheY-homologous receiver domain
C4N11_RS05780	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS05785	SM00478	endonuclease III
C4N11_RS05835	SM00487	DEAD-like helicases superfamily
C4N11_RS05835	SM00490	helicase superfamily c-terminal domain
C4N11_RS05845	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS05845	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C4N11_RS05850	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05860	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05860	SM00962	SRP54-type protein, GTPase domain
C4N11_RS05860	SM00963	SRP54-type protein, helical bundle domain
C4N11_RS05875	SM00968	SMC proteins Flexible Hinge Domain
C4N11_RS05880	SM00358	Double-stranded RNA binding motif
C4N11_RS05880	SM00535	Ribonuclease III family
C4N11_RS05890	SM01240	C4N11_RS05890
C4N11_RS05900	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS05925	SM01329	C4N11_RS05925
C4N11_RS05950	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C4N11_RS05950	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C4N11_RS05950	SM00493	C4N11_RS05950
C4N11_RS06005	SM00851	MGS-like domain
C4N11_RS06005	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C4N11_RS06005	SM01209	C4N11_RS06005
C4N11_RS06010	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C4N11_RS06025	SM00478	endonuclease III
C4N11_RS06045	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06070	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06070	SM00962	SRP54-type protein, GTPase domain
C4N11_RS06070	SM00963	SRP54-type protein, helical bundle domain
C4N11_RS06085	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C4N11_RS06115	SM00830	Chorismate mutase type II
C4N11_RS06145	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C4N11_RS06280	SM01130	C4N11_RS06280
C4N11_RS06320	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06325	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06380	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS06495	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS06525	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06530	SM01260	C4N11_RS06530
C4N11_RS06550	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06555	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS06575	SM00507	HNH nucleases
C4N11_RS06580	SM00487	DEAD-like helicases superfamily
C4N11_RS06675	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS06720	SM00889	Elongation factor G, domain IV
C4N11_RS06730	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS06820	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06825	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06940	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS06945	SM00642	Alpha-amylase domain
C4N11_RS06950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C4N11_RS06980	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C4N11_RS07005	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS07005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C4N11_RS07015	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07020	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07075	SM00729	Elongator protein 3, MiaB family, Radical SAM
C4N11_RS07120	SM01208	C4N11_RS07120
C4N11_RS07145	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS07195	SM00342	helix_turn_helix, arabinose operon control protein
C4N11_RS07200	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07205	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07220	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C4N11_RS07265	SM00866	C4N11_RS07265
C4N11_RS07300	SM00854	Bacterial capsule synthesis protein PGA_cap
C4N11_RS07320	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C4N11_RS07335	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07445	SM00487	DEAD-like helicases superfamily
C4N11_RS07445	SM00490	helicase superfamily c-terminal domain
C4N11_RS07525	SM00062	Bacterial periplasmic substrate-binding proteins
C4N11_RS07530	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07540	SM00028	Tetratricopeptide repeats
C4N11_RS07560	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07635	SM00487	DEAD-like helicases superfamily
C4N11_RS07635	SM00490	helicase superfamily c-terminal domain
C4N11_RS07650	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07685	SM01131	C4N11_RS07685
C4N11_RS07700	SM00316	Ribosomal protein S1-like RNA-binding domain
C4N11_RS07750	SM01208	C4N11_RS07750
C4N11_RS07785	SM00831	Cation transporter/ATPase, N-terminus
C4N11_RS07795	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS07850	SM00644	C4N11_RS07850
C4N11_RS07965	SM00470	ParB-like nuclease domain
C4N11_RS08075	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS08120	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08120	SM00994	ClpX C4-type zinc finger
C4N11_RS08120	SM01086	C-terminal, D2-small domain, of ClpB protein
C4N11_RS08170	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08195	SM00487	DEAD-like helicases superfamily
C4N11_RS08195	SM00490	helicase superfamily c-terminal domain
C4N11_RS08315	SM00563	Phosphate acyltransferases
C4N11_RS08325	SM01387	C4N11_RS08325
C4N11_RS08355	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C4N11_RS08360	SM00387	Histidine kinase-like ATPases
C4N11_RS08365	SM00448	cheY-homologous receiver domain
C4N11_RS08365	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS08390	SM00529	Helix-turn-helix diphteria tox regulatory element
C4N11_RS08390	SM00899	C4N11_RS08390
C4N11_RS08420	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C4N11_RS08420	SM00954	Region found in RelA / SpoT proteins
C4N11_RS08430	SM00849	Metallo-beta-lactamase superfamily
C4N11_RS08440	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08465	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08475	SM00855	Phosphoglycerate mutase family
C4N11_RS08510	SM00363	S4 RNA-binding domain
C4N11_RS08530	SM00864	Tubulin/FtsZ family, GTPase domain
C4N11_RS08530	SM00865	Tubulin/FtsZ family, C-terminal domain
C4N11_RS08535	SM00842	Cell division protein FtsA
C4N11_RS08560	SM00493	C4N11_RS08560
C4N11_RS08580	SM01130	C4N11_RS08580
C4N11_RS08660	SM00282	Laminin G domain
C4N11_RS08680	SM00487	DEAD-like helicases superfamily
C4N11_RS08680	SM00490	helicase superfamily c-terminal domain
C4N11_RS08685	SM01005	Alanine racemase, C-terminal domain
C4N11_RS08705	SM00957	SecA DEAD-like domain
C4N11_RS08705	SM00958	SecA preprotein cross-linking domain
C4N11_RS08715	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08735	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS08775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C4N11_RS08780	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08795	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS08835	SM00640	Glycosyl hydrolases family 32
C4N11_RS08840	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS08875	SM00220	Serine/Threonine protein kinases, catalytic domain
C4N11_RS08875	SM00740	C4N11_RS08875
C4N11_RS08880	SM00331	Sigma factor PP2C-like phosphatases
C4N11_RS08880	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
C4N11_RS08895	SM00487	DEAD-like helicases superfamily
C4N11_RS08895	SM00490	helicase superfamily c-terminal domain
C4N11_RS08900	SM01409	C4N11_RS08900
C4N11_RS08905	SM00072	Guanylate kinase homologues.
C4N11_RS08910	SM00322	K homology RNA-binding domain
C4N11_RS08910	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C4N11_RS08915	SM00857	Resolvase, N terminal domain
C4N11_RS08960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C4N11_RS08970	SM01103	C4N11_RS08970
C4N11_RS09035	SM00957	SecA DEAD-like domain
C4N11_RS09035	SM00958	SecA preprotein cross-linking domain
C4N11_RS09125	SM00347	helix_turn_helix multiple antibiotic resistance protein
C4N11_RS09190	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09240	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09250	SM00640	Glycosyl hydrolases family 32
C4N11_RS09270	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS09365	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS09415	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS09435	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09475	SM00710	Parallel beta-helix repeats
C4N11_RS09500	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09505	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09550	SM00927	DNA mismatch repair enzyme MutH
C4N11_RS09575	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS09585	SM00422	helix_turn_helix, mercury resistance
C4N11_RS09610	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09620	SM00347	helix_turn_helix multiple antibiotic resistance protein
C4N11_RS09660	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09670	SM01234	C4N11_RS09670
C4N11_RS09675	SM00363	S4 RNA-binding domain
C4N11_RS09695	SM00116	Domain in cystathionine beta-synthase and other proteins.
C4N11_RS09720	SM00642	Alpha-amylase domain
C4N11_RS09735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C4N11_RS09735	SM00866	C4N11_RS09735
C4N11_RS09740	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09755	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09760	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS09795	SM00642	Alpha-amylase domain
C4N11_RS09820	SM00342	helix_turn_helix, arabinose operon control protein
C4N11_RS09980	SM00883	Chaperonin 10 Kd subunit
C4N11_RS10025	SM00850	LytTr DNA-binding domain
C4N11_RS10030	SM00014	Acid phosphatase homologues
C4N11_RS10045	SM00347	helix_turn_helix multiple antibiotic resistance protein
C4N11_RS10130	SM00644	C4N11_RS10130
C4N11_RS10145	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10150	SM00852	Probable molybdopterin binding domain
C4N11_RS10180	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS10200	SM01260	C4N11_RS10200
C4N11_RS10215	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10230	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10240	SM00562	C4N11_RS10240
C4N11_RS10245	SM00663	RNA polymerase I subunit A N-terminus
C4N11_RS10260	SM01091	Transporter associated domain
C4N11_RS10265	SM00892	DNA/RNA non-specific endonuclease
C4N11_RS10315	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C4N11_RS10360	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
C4N11_RS10375	SM00650	Ribosomal RNA adenine dimethylases
C4N11_RS10385	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10405	SM00493	C4N11_RS10405
C4N11_RS10450	SM00870	C4N11_RS10450
C4N11_RS10455	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS10460	SM00421	helix_turn_helix, Lux Regulon
C4N11_RS10460	SM00448	cheY-homologous receiver domain
C4N11_RS10475	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10565	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C4N11_RS10565	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C4N11_RS10590	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C4N11_RS10630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C4N11_RS10630	SM00866	C4N11_RS10630
C4N11_RS10660	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
C4N11_RS10665	SM00226	Low molecular weight phosphatase family
C4N11_RS10670	SM01323	C4N11_RS10670
C4N11_RS10675	SM00861	Transketolase, pyrimidine binding domain
C4N11_RS10690	SM01007	Class II Aldolase and Adducin N-terminal domain
C4N11_RS10700	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C4N11_RS10725	SM00393	Putative single-stranded nucleic acids-binding domain
C4N11_RS10725	SM01245	C4N11_RS10725
C4N11_RS10785	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10795	SM00829	Enoylreductase
C4N11_RS10830	SM00347	helix_turn_helix multiple antibiotic resistance protein
C4N11_RS10835	SM00257	Lysin motif
C4N11_RS10965	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10975	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS10980	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C4N11_RS10980	SM00534	ATPase domain of DNA mismatch repair MUTS family
C4N11_RS10990	SM00836	DALR anticodon binding domain
C4N11_RS10990	SM01016	Arginyl tRNA synthetase N terminal dom
C4N11_RS11005	SM00448	cheY-homologous receiver domain
C4N11_RS11005	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS11010	SM00387	Histidine kinase-like ATPases
C4N11_RS11010	SM00388	His Kinase A (phosphoacceptor) domain
C4N11_RS11030	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11045	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS11090	SM00363	S4 RNA-binding domain
C4N11_RS11160	SM00354	helix_turn _helix lactose operon repressor
C4N11_RS11215	SM00530	Helix-turn-helix XRE-family like proteins 
C4N11_RS11275	SM00861	Transketolase, pyrimidine binding domain
C4N11_RS11300	SM00244	prohibitin homologues
C4N11_RS11355	SM00872	Alpha mannosidase, middle domain
C4N11_RS11360	SM01149	C4N11_RS11360
C4N11_RS11370	SM00812	Alpha-L-fucosidase
C4N11_RS11425	SM00244	prohibitin homologues
C4N11_RS11440	SM00607	eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain
C4N11_RS11475	SM01007	Class II Aldolase and Adducin N-terminal domain
C4N11_RS11485	SM00420	helix_turn_helix, Deoxyribose operon repressor
C4N11_RS11485	SM01134	C4N11_RS11485
C4N11_RS11500	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11505	SM00347	helix_turn_helix multiple antibiotic resistance protein
C4N11_RS11505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C4N11_RS11610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C4N11_RS11610	SM00387	Histidine kinase-like ATPases
C4N11_RS11610	SM00388	His Kinase A (phosphoacceptor) domain
C4N11_RS11615	SM00448	cheY-homologous receiver domain
C4N11_RS11615	SM00862	Transcriptional regulatory protein, C terminal
C4N11_RS11625	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11625	SM01086	C-terminal, D2-small domain, of ClpB protein
C4N11_RS11635	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11655	SM00287	Bacterial SH3 domain homologues
C4N11_RS11690	SM00487	DEAD-like helicases superfamily
C4N11_RS11690	SM00490	helicase superfamily c-terminal domain
C4N11_RS11755	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11760	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11795	SM00116	Domain in cystathionine beta-synthase and other proteins.
C4N11_RS11795	SM01240	C4N11_RS11795
C4N11_RS11805	SM00382	ATPases associated with a variety of cellular activities
C4N11_RS11845	SM00448	cheY-homologous receiver domain
C4N11_RS11845	SM00850	LytTr DNA-binding domain
C4N11_RS11870	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C4N11_RS11875	SM00470	ParB-like nuclease domain
