SPD_RS00005	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SPD_RS00010	SM00480	DNA polymerase III beta subunit
SPD_RS00030	SM00487	DEAD-like helicases superfamily
SPD_RS00030	SM00490	helicase superfamily c-terminal domain
SPD_RS00030	SM00982	SPD_RS00030
SPD_RS00030	SM01058	CarD-like/TRCF domain
SPD_RS00035	SM00363	S4 RNA-binding domain
SPD_RS00055	SM00977	TilS substrate C-terminal domain
SPD_RS00065	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00140	SM00788	Adenylosuccinate synthetase
SPD_RS00155	SM00855	Phosphoglycerate mutase family
SPD_RS00160	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00165	SM00947	Carbonic anhydrase
SPD_RS00180	SM01400	SPD_RS00180
SPD_RS00200	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SPD_RS00200	SM00474	3'-5' exonuclease
SPD_RS00200	SM00475	5'-3' exonuclease
SPD_RS00200	SM00482	DNA polymerase A domain
SPD_RS00205	SM00881	CoA binding domain
SPD_RS00265	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00280	SM01211	SPD_RS00280
SPD_RS00305	SM00798	AICARFT/IMPCHase bienzyme
SPD_RS00305	SM00851	MGS-like domain
SPD_RS00310	SM01209	SPD_RS00310
SPD_RS00310	SM01210	SPD_RS00310
SPD_RS00315	SM01001	AIR carboxylase
SPD_RS00330	SM00998	Adenylosuccinate lyase C-terminus
SPD_RS00335	SM01208	SPD_RS00335
SPD_RS00340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPD_RS00340	SM00866	SPD_RS00340
SPD_RS00430	SM00448	cheY-homologous receiver domain
SPD_RS00430	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS00435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPD_RS00435	SM00387	Histidine kinase-like ATPases
SPD_RS00435	SM00388	His Kinase A (phosphoacceptor) domain
SPD_RS00440	SM00363	S4 RNA-binding domain
SPD_RS00440	SM01390	SPD_RS00440
SPD_RS00480	SM00450	Rhodanese Homology Domain
SPD_RS00545	SM00257	Lysin motif
SPD_RS00565	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00570	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS00570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SPD_RS00585	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS00595	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00600	SM00871	Bacterial transcription activator, effector binding domain
SPD_RS00700	SM01228	SPD_RS00700
SPD_RS00705	SM00849	Metallo-beta-lactamase superfamily
SPD_RS00780	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00795	SM00984	UDP binding domain
SPD_RS00800	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS00830	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS00845	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00845	SM00930	SPD_RS00845
SPD_RS00870	SM00342	helix_turn_helix, arabinose operon control protein
SPD_RS00870	SM00448	cheY-homologous receiver domain
SPD_RS00895	SM00850	LytTr DNA-binding domain
SPD_RS00900	SM00853	MutL C terminal dimerisation domain
SPD_RS00900	SM01340	SPD_RS00900
SPD_RS00925	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SPD_RS00955	SM00382	ATPases associated with a variety of cellular activities
SPD_RS00980	SM00732	Likely ribonuclease with RNase H fold.
SPD_RS01000	SM00155	Phospholipase D. Active site motifs.
SPD_RS01040	SM01403	SPD_RS01040
SPD_RS01060	SM01382	SPD_RS01060
SPD_RS01060	SM01383	SPD_RS01060
SPD_RS01075	SM00322	K homology RNA-binding domain
SPD_RS01095	SM01374	SPD_RS01095
SPD_RS01100	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SPD_RS01155	SM00316	Ribosomal protein S1-like RNA-binding domain
SPD_RS01175	SM00662	RNA polymerases D
SPD_RS01195	SM00855	Phosphoglycerate mutase family
SPD_RS01210	SM00382	ATPases associated with a variety of cellular activities
SPD_RS01225	SM00342	helix_turn_helix, arabinose operon control protein
SPD_RS01235	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPD_RS01235	SM01134	SPD_RS01235
SPD_RS01295	SM00382	ATPases associated with a variety of cellular activities
SPD_RS01340	SM00642	Alpha-amylase domain
SPD_RS01355	SM00838	Elongation factor G C-terminus
SPD_RS01355	SM00889	Elongation factor G, domain IV
SPD_RS01360	SM00479	SPD_RS01360
SPD_RS01360	SM00481	DNA polymerase alpha chain like domain
SPD_RS01390	SM00363	S4 RNA-binding domain
SPD_RS01420	SM00829	Enoylreductase
SPD_RS01455	SM00905	Dihydroneopterin aldolase
SPD_RS01540	SM01321	SPD_RS01540
SPD_RS01590	SM01323	SPD_RS01590
SPD_RS01600	SM00354	helix_turn _helix lactose operon repressor
SPD_RS01615	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS01630	SM00740	SPD_RS01630
SPD_RS01645	SM00382	ATPases associated with a variety of cellular activities
SPD_RS01645	SM01086	C-terminal, D2-small domain, of ClpB protein
SPD_RS01660	SM00642	Alpha-amylase domain
SPD_RS01735	SM00984	UDP binding domain
SPD_RS01815	SM00981	SPD_RS01815
SPD_RS01825	SM01350	SPD_RS01825
SPD_RS01830	SM00448	cheY-homologous receiver domain
SPD_RS01830	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS01865	SM00387	Histidine kinase-like ATPases
SPD_RS01870	SM00421	helix_turn_helix, Lux Regulon
SPD_RS01870	SM00448	cheY-homologous receiver domain
SPD_RS01990	SM00463	Small MutS-related domain
SPD_RS01990	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SPD_RS01990	SM00534	ATPase domain of DNA mismatch repair MUTS family
SPD_RS02030	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPD_RS02050	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SPD_RS02055	SM00822	SPD_RS02055
SPD_RS02060	SM00825	Beta-ketoacyl synthase
SPD_RS02075	SM00878	Biotin carboxylase C-terminal domain
SPD_RS02105	SM00841	Elongation factor P, C-terminal
SPD_RS02105	SM01185	SPD_RS02105
SPD_RS02110	SM00845	GatB domain
SPD_RS02145	SM01120	SPD_RS02145
SPD_RS02145	SM01121	SPD_RS02145
SPD_RS02185	SM00382	ATPases associated with a variety of cellular activities
SPD_RS02190	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS02310	SM00382	ATPases associated with a variety of cellular activities
SPD_RS02330	SM00014	Acid phosphatase homologues
SPD_RS02360	SM01208	SPD_RS02360
SPD_RS02375	SM00422	helix_turn_helix, mercury resistance
SPD_RS02380	SM01230	SPD_RS02380
SPD_RS02415	SM00487	DEAD-like helicases superfamily
SPD_RS02450	SM00271	DnaJ molecular chaperone homology domain
SPD_RS02470	SM00382	ATPases associated with a variety of cellular activities
SPD_RS02485	SM00850	LytTr DNA-binding domain
SPD_RS02490	SM00448	cheY-homologous receiver domain
SPD_RS02490	SM00850	LytTr DNA-binding domain
SPD_RS02510	SM00382	ATPases associated with a variety of cellular activities
SPD_RS02555	SM00322	K homology RNA-binding domain
SPD_RS02695	SM01061	CAT RNA binding domain
SPD_RS02720	SM00873	B3/4 domain
SPD_RS02720	SM00874	tRNA synthetase B5 domain
SPD_RS02720	SM00896	Ferredoxin-fold anticodon binding domain
SPD_RS02740	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS02755	SM00316	Ribosomal protein S1-like RNA-binding domain
SPD_RS02755	SM00322	K homology RNA-binding domain
SPD_RS02770	SM00840	SPD_RS02770
SPD_RS02800	SM00382	ATPases associated with a variety of cellular activities
SPD_RS02810	SM00448	cheY-homologous receiver domain
SPD_RS02810	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS02815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPD_RS02815	SM00387	Histidine kinase-like ATPases
SPD_RS02815	SM00388	His Kinase A (phosphoacceptor) domain
SPD_RS02840	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS02860	SM00849	Metallo-beta-lactamase superfamily
SPD_RS02885	SM00465	GIY-YIG type nucleases (URI domain)
SPD_RS02895	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS02910	SM00986	Uracil DNA glycosylase superfamily
SPD_RS02910	SM00987	UreE urease accessory protein, C-terminal domain 
SPD_RS02940	SM00649	Ribosomal protein L11/L12
SPD_RS02960	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03010	SM01208	SPD_RS03010
SPD_RS03080	SM00342	helix_turn_helix, arabinose operon control protein
SPD_RS03080	SM00448	cheY-homologous receiver domain
SPD_RS03085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPD_RS03085	SM00387	Histidine kinase-like ATPases
SPD_RS03095	SM01208	SPD_RS03095
SPD_RS03105	SM00894	Excalibur calcium-binding domain
SPD_RS03160	SM00450	Rhodanese Homology Domain
SPD_RS03175	SM00838	Elongation factor G C-terminus
SPD_RS03195	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03250	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SPD_RS03280	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03285	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS03295	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03345	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03430	SM00422	helix_turn_helix, mercury resistance
SPD_RS03490	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03495	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03500	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPD_RS03505	SM00937	SPD_RS03505
SPD_RS03510	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03530	SM00487	DEAD-like helicases superfamily
SPD_RS03530	SM00490	helicase superfamily c-terminal domain
SPD_RS03570	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03650	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03705	SM01022	SPD_RS03705
SPD_RS03715	SM00448	cheY-homologous receiver domain
SPD_RS03715	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS03720	SM00387	Histidine kinase-like ATPases
SPD_RS03720	SM00388	His Kinase A (phosphoacceptor) domain
SPD_RS03735	SM00479	SPD_RS03735
SPD_RS03735	SM00487	DEAD-like helicases superfamily
SPD_RS03735	SM00491	SPD_RS03735
SPD_RS03755	SM00387	Histidine kinase-like ATPases
SPD_RS03755	SM00433	TopoisomeraseII
SPD_RS03795	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03795	SM01086	C-terminal, D2-small domain, of ClpB protein
SPD_RS03810	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03895	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SPD_RS03900	SM01133	SPD_RS03900
SPD_RS03915	SM00382	ATPases associated with a variety of cellular activities
SPD_RS03950	SM01207	SPD_RS03950
SPD_RS03955	SM00387	Histidine kinase-like ATPases
SPD_RS03955	SM00433	TopoisomeraseII
SPD_RS03965	SM00434	DNA Topoisomerase IV
SPD_RS04010	SM00316	Ribosomal protein S1-like RNA-binding domain
SPD_RS04035	SM00382	ATPases associated with a variety of cellular activities
SPD_RS04045	SM00382	ATPases associated with a variety of cellular activities
SPD_RS04075	SM00936	Penicillin-binding protein 5, C-terminal domain 
SPD_RS04090	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPD_RS04090	SM01134	SPD_RS04090
SPD_RS04105	SM00382	ATPases associated with a variety of cellular activities
SPD_RS04105	SM00843	SPD_RS04105
SPD_RS04120	SM00981	SPD_RS04120
SPD_RS04155	SM00487	DEAD-like helicases superfamily
SPD_RS04170	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SPD_RS04170	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
SPD_RS04175	SM00481	DNA polymerase alpha chain like domain
SPD_RS04250	SM00316	Ribosomal protein S1-like RNA-binding domain
SPD_RS04250	SM00732	Likely ribonuclease with RNase H fold.
SPD_RS04255	SM00731	SprT homologues.
SPD_RS04275	SM00382	ATPases associated with a variety of cellular activities
SPD_RS04365	SM00363	S4 RNA-binding domain
SPD_RS04370	SM00849	Metallo-beta-lactamase superfamily
SPD_RS04375	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SPD_RS04480	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SPD_RS04485	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SPD_RS04495	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SPD_RS04550	SM00047	Lysozyme subfamily 2
SPD_RS04575	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SPD_RS04575	SM01232	SPD_RS04575
SPD_RS04600	SM00316	Ribosomal protein S1-like RNA-binding domain
SPD_RS04600	SM00955	SPD_RS04600
SPD_RS04645	SM00855	Phosphoglycerate mutase family
SPD_RS04690	SM00479	SPD_RS04690
SPD_RS04800	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SPD_RS04805	SM01130	SPD_RS04805
SPD_RS04830	SM00937	SPD_RS04830
SPD_RS04900	SM00382	ATPases associated with a variety of cellular activities
SPD_RS04920	SM00857	Resolvase, N terminal domain
SPD_RS04945	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SPD_RS04950	SM00642	Alpha-amylase domain
SPD_RS04965	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS05015	SM00984	UDP binding domain
SPD_RS05070	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS05095	SM00382	ATPases associated with a variety of cellular activities
SPD_RS05100	SM00400	zinc finger
SPD_RS05100	SM00493	SPD_RS05100
SPD_RS05170	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPD_RS05205	SM00881	CoA binding domain
SPD_RS05225	SM01400	SPD_RS05225
SPD_RS05230	SM01118	SPD_RS05230
SPD_RS05235	SM00954	Region found in RelA / SpoT proteins
SPD_RS05300	SM00904	Riboflavin kinase
SPD_RS05315	SM00411	bacterial (prokaryotic) histone like domain
SPD_RS05320	SM00382	ATPases associated with a variety of cellular activities
SPD_RS05335	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SPD_RS05335	SM00292	breast cancer carboxy-terminal domain
SPD_RS05335	SM00532	Ligase N family
SPD_RS05340	SM00642	Alpha-amylase domain
SPD_RS05360	SM00642	Alpha-amylase domain
SPD_RS05395	SM01192	SPD_RS05395
SPD_RS05395	SM01193	SPD_RS05395
SPD_RS05425	SM01208	SPD_RS05425
SPD_RS05465	SM00861	Transketolase, pyrimidine binding domain
SPD_RS05495	SM00986	Uracil DNA glycosylase superfamily
SPD_RS05495	SM00987	UreE urease accessory protein, C-terminal domain 
SPD_RS05550	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPD_RS05550	SM01134	SPD_RS05550
SPD_RS05570	SM01061	CAT RNA binding domain
SPD_RS05575	SM01133	SPD_RS05575
SPD_RS05625	SM00838	Elongation factor G C-terminus
SPD_RS05645	SM00363	S4 RNA-binding domain
SPD_RS05710	SM00434	DNA Topoisomerase IV
SPD_RS05720	SM00974	SPD_RS05720
SPD_RS05740	SM00849	Metallo-beta-lactamase superfamily
SPD_RS05745	SM00091	PAS domain
SPD_RS05745	SM00387	Histidine kinase-like ATPases
SPD_RS05745	SM00388	His Kinase A (phosphoacceptor) domain
SPD_RS05750	SM00448	cheY-homologous receiver domain
SPD_RS05750	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS05755	SM00478	endonuclease III
SPD_RS05805	SM00487	DEAD-like helicases superfamily
SPD_RS05805	SM00490	helicase superfamily c-terminal domain
SPD_RS05815	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS05815	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SPD_RS05820	SM00382	ATPases associated with a variety of cellular activities
SPD_RS05830	SM00382	ATPases associated with a variety of cellular activities
SPD_RS05830	SM00962	SRP54-type protein, GTPase domain
SPD_RS05830	SM00963	SRP54-type protein, helical bundle domain
SPD_RS05845	SM00968	SMC proteins Flexible Hinge Domain
SPD_RS05850	SM00358	Double-stranded RNA binding motif
SPD_RS05850	SM00535	Ribonuclease III family
SPD_RS05860	SM01240	SPD_RS05860
SPD_RS05870	SM00382	ATPases associated with a variety of cellular activities
SPD_RS05895	SM01329	SPD_RS05895
SPD_RS05900	SM00917	LeuA allosteric (dimerisation) domain
SPD_RS05925	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SPD_RS05925	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SPD_RS05925	SM00493	SPD_RS05925
SPD_RS05980	SM00851	MGS-like domain
SPD_RS05980	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SPD_RS05980	SM01209	SPD_RS05980
SPD_RS05985	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SPD_RS06000	SM00478	endonuclease III
SPD_RS06015	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06040	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06040	SM00962	SRP54-type protein, GTPase domain
SPD_RS06040	SM00963	SRP54-type protein, helical bundle domain
SPD_RS06055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPD_RS06085	SM00830	Chorismate mutase type II
SPD_RS06120	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SPD_RS06145	SM01130	SPD_RS06145
SPD_RS06165	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06220	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06225	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06285	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06290	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06405	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06410	SM00642	Alpha-amylase domain
SPD_RS06415	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SPD_RS06445	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPD_RS06470	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS06470	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SPD_RS06480	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06485	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06540	SM00729	Elongator protein 3, MiaB family, Radical SAM
SPD_RS06610	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS06655	SM00342	helix_turn_helix, arabinose operon control protein
SPD_RS06660	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06665	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06680	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPD_RS06720	SM00866	SPD_RS06720
SPD_RS06755	SM00854	Bacterial capsule synthesis protein PGA_cap
SPD_RS06770	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SPD_RS06785	SM00382	ATPases associated with a variety of cellular activities
SPD_RS06895	SM00487	DEAD-like helicases superfamily
SPD_RS06895	SM00490	helicase superfamily c-terminal domain
SPD_RS06995	SM00062	Bacterial periplasmic substrate-binding proteins
SPD_RS07000	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07010	SM00028	Tetratricopeptide repeats
SPD_RS07030	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07105	SM00487	DEAD-like helicases superfamily
SPD_RS07105	SM00490	helicase superfamily c-terminal domain
SPD_RS07175	SM01131	SPD_RS07175
SPD_RS07190	SM00316	Ribosomal protein S1-like RNA-binding domain
SPD_RS07245	SM01208	SPD_RS07245
SPD_RS07280	SM00831	Cation transporter/ATPase, N-terminus
SPD_RS07290	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07365	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07365	SM00994	ClpX C4-type zinc finger
SPD_RS07365	SM01086	C-terminal, D2-small domain, of ClpB protein
SPD_RS07420	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07440	SM00487	DEAD-like helicases superfamily
SPD_RS07440	SM00490	helicase superfamily c-terminal domain
SPD_RS07570	SM00563	Phosphate acyltransferases
SPD_RS07580	SM01387	SPD_RS07580
SPD_RS07605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SPD_RS07610	SM00387	Histidine kinase-like ATPases
SPD_RS07615	SM00448	cheY-homologous receiver domain
SPD_RS07615	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS07640	SM00529	Helix-turn-helix diphteria tox regulatory element
SPD_RS07640	SM00899	SPD_RS07640
SPD_RS07685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPD_RS07685	SM00954	Region found in RelA / SpoT proteins
SPD_RS07700	SM00849	Metallo-beta-lactamase superfamily
SPD_RS07710	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07735	SM00382	ATPases associated with a variety of cellular activities
SPD_RS07745	SM00855	Phosphoglycerate mutase family
SPD_RS07785	SM00363	S4 RNA-binding domain
SPD_RS07805	SM00864	Tubulin/FtsZ family, GTPase domain
SPD_RS07805	SM00865	Tubulin/FtsZ family, C-terminal domain
SPD_RS07810	SM00842	Cell division protein FtsA
SPD_RS07835	SM00493	SPD_RS07835
SPD_RS07855	SM01130	SPD_RS07855
SPD_RS07935	SM00282	Laminin G domain
SPD_RS07950	SM00487	DEAD-like helicases superfamily
SPD_RS07950	SM00490	helicase superfamily c-terminal domain
SPD_RS07955	SM01005	Alanine racemase, C-terminal domain
SPD_RS07975	SM00957	SecA DEAD-like domain
SPD_RS07975	SM00958	SecA preprotein cross-linking domain
SPD_RS07985	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08005	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS08045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPD_RS08050	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08065	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08100	SM00640	Glycosyl hydrolases family 32
SPD_RS08105	SM00354	helix_turn _helix lactose operon repressor
SPD_RS08145	SM00220	Serine/Threonine protein kinases, catalytic domain
SPD_RS08145	SM00740	SPD_RS08145
SPD_RS08150	SM00331	Sigma factor PP2C-like phosphatases
SPD_RS08150	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SPD_RS08165	SM00487	DEAD-like helicases superfamily
SPD_RS08165	SM00490	helicase superfamily c-terminal domain
SPD_RS08170	SM01409	SPD_RS08170
SPD_RS08175	SM00072	Guanylate kinase homologues.
SPD_RS08180	SM00322	K homology RNA-binding domain
SPD_RS08180	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPD_RS08215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPD_RS08225	SM01103	SPD_RS08225
SPD_RS08260	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPD_RS08350	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08360	SM00640	Glycosyl hydrolases family 32
SPD_RS08380	SM00354	helix_turn _helix lactose operon repressor
SPD_RS08430	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS08485	SM00354	helix_turn _helix lactose operon repressor
SPD_RS08505	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08545	SM00710	Parallel beta-helix repeats
SPD_RS08570	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08575	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08640	SM00354	helix_turn _helix lactose operon repressor
SPD_RS08650	SM00422	helix_turn_helix, mercury resistance
SPD_RS08690	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08700	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPD_RS08735	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08745	SM01234	SPD_RS08745
SPD_RS08750	SM00363	S4 RNA-binding domain
SPD_RS08770	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPD_RS08795	SM00642	Alpha-amylase domain
SPD_RS08805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPD_RS08805	SM00866	SPD_RS08805
SPD_RS08820	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08825	SM00382	ATPases associated with a variety of cellular activities
SPD_RS08850	SM00642	Alpha-amylase domain
SPD_RS08880	SM00342	helix_turn_helix, arabinose operon control protein
SPD_RS09035	SM00883	Chaperonin 10 Kd subunit
SPD_RS09080	SM00850	LytTr DNA-binding domain
SPD_RS09085	SM00014	Acid phosphatase homologues
SPD_RS09095	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09190	SM00644	SPD_RS09190
SPD_RS09200	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09205	SM00852	Probable molybdopterin binding domain
SPD_RS09230	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS09250	SM01260	SPD_RS09250
SPD_RS09265	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09280	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09290	SM00562	SPD_RS09290
SPD_RS09295	SM00663	RNA polymerase I subunit A N-terminus
SPD_RS09310	SM01091	Transporter associated domain
SPD_RS09315	SM00892	DNA/RNA non-specific endonuclease
SPD_RS09365	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SPD_RS09405	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SPD_RS09420	SM00650	Ribosomal RNA adenine dimethylases
SPD_RS09430	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09440	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS09445	SM00493	SPD_RS09445
SPD_RS09485	SM00870	SPD_RS09485
SPD_RS09495	SM00354	helix_turn _helix lactose operon repressor
SPD_RS09500	SM00421	helix_turn_helix, Lux Regulon
SPD_RS09500	SM00448	cheY-homologous receiver domain
SPD_RS09515	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09605	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SPD_RS09605	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SPD_RS09630	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SPD_RS09665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPD_RS09665	SM00866	SPD_RS09665
SPD_RS09695	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SPD_RS09700	SM00226	Low molecular weight phosphatase family
SPD_RS09705	SM01323	SPD_RS09705
SPD_RS09710	SM00861	Transketolase, pyrimidine binding domain
SPD_RS09725	SM01007	Class II Aldolase and Adducin N-terminal domain
SPD_RS09735	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SPD_RS09760	SM00393	Putative single-stranded nucleic acids-binding domain
SPD_RS09760	SM01245	SPD_RS09760
SPD_RS09825	SM00382	ATPases associated with a variety of cellular activities
SPD_RS09835	SM00829	Enoylreductase
SPD_RS09880	SM00257	Lysin motif
SPD_RS10010	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10020	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10025	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SPD_RS10025	SM00534	ATPase domain of DNA mismatch repair MUTS family
SPD_RS10035	SM00836	DALR anticodon binding domain
SPD_RS10035	SM01016	Arginyl tRNA synthetase N terminal dom
SPD_RS10050	SM00448	cheY-homologous receiver domain
SPD_RS10050	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS10055	SM00387	Histidine kinase-like ATPases
SPD_RS10055	SM00388	His Kinase A (phosphoacceptor) domain
SPD_RS10075	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10090	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS10135	SM00363	S4 RNA-binding domain
SPD_RS10205	SM00354	helix_turn _helix lactose operon repressor
SPD_RS10250	SM00530	Helix-turn-helix XRE-family like proteins 
SPD_RS10290	SM00861	Transketolase, pyrimidine binding domain
SPD_RS10315	SM00244	prohibitin homologues
SPD_RS10365	SM00872	Alpha mannosidase, middle domain
SPD_RS10370	SM01149	SPD_RS10370
SPD_RS10380	SM00812	Alpha-L-fucosidase
SPD_RS10425	SM00244	prohibitin homologues
SPD_RS10440	SM00607	eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain
SPD_RS10475	SM01007	Class II Aldolase and Adducin N-terminal domain
SPD_RS10485	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPD_RS10485	SM01134	SPD_RS10485
SPD_RS10500	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10505	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPD_RS10505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SPD_RS10600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPD_RS10600	SM00387	Histidine kinase-like ATPases
SPD_RS10600	SM00388	His Kinase A (phosphoacceptor) domain
SPD_RS10605	SM00448	cheY-homologous receiver domain
SPD_RS10605	SM00862	Transcriptional regulatory protein, C terminal
SPD_RS10615	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10615	SM01086	C-terminal, D2-small domain, of ClpB protein
SPD_RS10625	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10645	SM00287	Bacterial SH3 domain homologues
SPD_RS10680	SM00487	DEAD-like helicases superfamily
SPD_RS10680	SM00490	helicase superfamily c-terminal domain
SPD_RS10740	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10745	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10780	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPD_RS10780	SM01240	SPD_RS10780
SPD_RS10790	SM00382	ATPases associated with a variety of cellular activities
SPD_RS10830	SM00448	cheY-homologous receiver domain
SPD_RS10830	SM00850	LytTr DNA-binding domain
SPD_RS10855	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SPD_RS10860	SM00470	ParB-like nuclease domain
