locus-tag class description SPG_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SPG_RS00005 PF00308 Bacterial dnaA protein SPG_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SPG_RS00010 PF02767 DNA polymerase III beta subunit, central domain SPG_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SPG_RS00020 PF01926 50S ribosome-binding GTPase SPG_RS00020 PF06071 Protein of unknown function (DUF933) SPG_RS00025 PF01195 Peptidyl-tRNA hydrolase SPG_RS00030 PF02559 CarD-like/TRCF domain SPG_RS00030 PF00270 DEAD/DEAH box helicase SPG_RS00030 PF00271 Helicase conserved C-terminal domain SPG_RS00030 PF17757 UvrB interaction domain SPG_RS00030 PF03461 TRCF domain SPG_RS00035 PF01479 S4 domain SPG_RS00055 PF11734 TilS substrate C-terminal domain SPG_RS00055 PF01171 PP-loop family SPG_RS00060 PF00156 Phosphoribosyl transferase domain SPG_RS00065 PF06480 FtsH Extracellular SPG_RS00065 PF01434 Peptidase family M41 SPG_RS00065 PF17862 AAA+ lid domain SPG_RS00065 PF00004 ATPase family associated with various cellular activities (AAA) SPG_RS00125 PF00709 Adenylosuccinate synthetase SPG_RS00135 PF00692 dUTPase SPG_RS00150 PF00484 Carbonic anhydrase SPG_RS00165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPG_RS00165 PF14572 Phosphoribosyl synthetase-associated domain SPG_RS00185 PF01367 5'-3' exonuclease, C-terminal SAM fold SPG_RS00185 PF00476 DNA polymerase family A SPG_RS00185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SPG_RS00195 PF03601 Conserved hypothetical protein 698 SPG_RS00200 PF00155 Aminotransferase class I and II SPG_RS00205 PF11967 Recombination protein O N terminal SPG_RS00205 PF02565 Recombination protein O C terminal SPG_RS00210 PF02504 Fatty acid synthesis protein SPG_RS00215 PF00550 Phosphopantetheine attachment site SPG_RS00240 PF03412 Peptidase C39 family SPG_RS00240 PF00005 ABC transporter SPG_RS00240 PF00664 ABC transporter transmembrane region SPG_RS00250 PF01259 SAICAR synthetase SPG_RS00255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SPG_RS00255 PF02769 AIR synthase related protein, C-terminal domain SPG_RS00255 PF00586 AIR synthase related protein, N-terminal domain SPG_RS00260 PF00156 Phosphoribosyl transferase domain SPG_RS00265 PF02769 AIR synthase related protein, C-terminal domain SPG_RS00265 PF00586 AIR synthase related protein, N-terminal domain SPG_RS00270 PF00551 Formyl transferase SPG_RS00275 PF04892 VanZ like family SPG_RS00280 PF01808 AICARFT/IMPCHase bienzyme SPG_RS00280 PF02142 MGS-like domain SPG_RS00285 PF02843 Phosphoribosylglycinamide synthetase, C domain SPG_RS00285 PF02844 Phosphoribosylglycinamide synthetase, N domain SPG_RS00285 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SPG_RS00290 PF00731 AIR carboxylase SPG_RS00295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SPG_RS00295 PF02222 ATP-grasp domain SPG_RS00295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SPG_RS00305 PF10397 Adenylosuccinate lyase C-terminus SPG_RS00305 PF00206 Lyase SPG_RS00310 PF04650 YSIRK type signal peptide SPG_RS00310 PF07501 G5 domain SPG_RS00310 PF00728 Glycosyl hydrolase family 20, catalytic domain SPG_RS00310 PF00746 LPXTG cell wall anchor motif SPG_RS00315 PF00392 Bacterial regulatory proteins, gntR family SPG_RS00315 PF07702 UTRA domain SPG_RS00320 PF01301 Glycosyl hydrolases family 35 SPG_RS00325 PF03830 PTS system sorbose subfamily IIB component SPG_RS00330 PF03609 PTS system sorbose-specific iic component SPG_RS00335 PF03613 PTS system mannose/fructose/sorbose family IID component SPG_RS00345 PF01380 SIS domain SPG_RS00350 PF01263 Aldose 1-epimerase SPG_RS00365 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SPG_RS00365 PF07501 G5 domain SPG_RS00365 PF04650 YSIRK type signal peptide SPG_RS00365 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SPG_RS00370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPG_RS00375 PF12464 Maltose acetyltransferase SPG_RS00375 PF14602 Hexapeptide repeat of succinyl-transferase SPG_RS00390 PF02386 Cation transport protein SPG_RS00395 PF02254 TrkA-N domain SPG_RS00395 PF02080 TrkA-C domain SPG_RS00415 PF00486 Transcriptional regulatory protein, C terminal SPG_RS00415 PF00072 Response regulator receiver domain SPG_RS00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS00420 PF00512 His Kinase A (phospho-acceptor) domain SPG_RS00425 PF01479 S4 domain SPG_RS00425 PF00163 Ribosomal protein S4/S9 N-terminal domain SPG_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS00445 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS00450 PF12010 Domain of unknown function (DUF3502) SPG_RS00455 PF00581 Rhodanese-like domain SPG_RS00455 PF17773 UPF0176 acylphosphatase like domain SPG_RS00455 PF12368 Rhodanase C-terminal SPG_RS00480 PF03551 Transcriptional regulator PadR-like family SPG_RS00480 PF10400 Virulence activator alpha C-term SPG_RS00495 PF02719 Polysaccharide biosynthesis protein SPG_RS00505 PF13419 Haloacid dehalogenase-like hydrolase SPG_RS00510 PF03313 Serine dehydratase alpha chain SPG_RS00515 PF03315 Serine dehydratase beta chain SPG_RS00515 PF01842 ACT domain SPG_RS00540 PF02687 FtsX-like permease family SPG_RS00540 PF12704 MacB-like periplasmic core domain SPG_RS00540 PF00005 ABC transporter SPG_RS00545 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS00550 PF00764 Arginosuccinate synthase SPG_RS00640 PF00293 NUDIX domain SPG_RS00645 PF13932 GidA associated domain SPG_RS00645 PF01134 Glucose inhibited division protein A SPG_RS00650 PF17770 Ribonuclease J C-terminal domain SPG_RS00650 PF00753 Metallo-beta-lactamase superfamily SPG_RS00650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SPG_RS00655 PF07288 Protein of unknown function (DUF1447) SPG_RS00675 PF00814 Glycoprotease family SPG_RS00685 PF00814 Glycoprotease family SPG_RS00690 PF13683 Integrase core domain SPG_RS00690 PF01610 Transposase SPG_RS00715 PF13439 Glycosyltransferase Family 4 SPG_RS00715 PF00534 Glycosyl transferases group 1 SPG_RS00725 PF03412 Peptidase C39 family SPG_RS00725 PF00005 ABC transporter SPG_RS00725 PF00664 ABC transporter transmembrane region SPG_RS00750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPG_RS00750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPG_RS00755 PF01381 Helix-turn-helix SPG_RS00790 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS00795 PF03180 NLPA lipoprotein SPG_RS00800 PF01546 Peptidase family M20/M25/M40 SPG_RS00800 PF07687 Peptidase dimerisation domain SPG_RS00805 PF09383 NIL domain SPG_RS00805 PF00005 ABC transporter SPG_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS00825 PF06580 Histidine kinase SPG_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS00825 PF00672 HAMP domain SPG_RS00825 PF02743 Cache domain SPG_RS00830 PF12833 Helix-turn-helix domain SPG_RS00830 PF00072 Response regulator receiver domain SPG_RS00840 PF07972 NrdI Flavodoxin like SPG_RS00855 PF04397 LytTr DNA-binding domain SPG_RS00860 PF08676 MutL C terminal dimerisation domain SPG_RS00860 PF01119 DNA mismatch repair protein, C-terminal domain SPG_RS00865 PF00885 6,7-dimethyl-8-ribityllumazine synthase SPG_RS00870 PF00925 GTP cyclohydrolase II SPG_RS00870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SPG_RS00875 PF00677 Lumazine binding domain SPG_RS00880 PF01872 RibD C-terminal domain SPG_RS00880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPG_RS00885 PF01330 RuvA N terminal domain SPG_RS00885 PF07499 RuvA, C-terminal domain SPG_RS00890 PF13673 Acetyltransferase (GNAT) domain SPG_RS00890 PF13302 Acetyltransferase (GNAT) domain SPG_RS00890 PF03352 Methyladenine glycosylase SPG_RS00890 PF00958 GMP synthase C terminal domain SPG_RS00890 PF00117 Glutamine amidotransferase class-I SPG_RS00915 PF17760 UvrA interaction domain SPG_RS00915 PF17755 UvrA DNA-binding domain SPG_RS00915 PF00005 ABC transporter SPG_RS00920 PF00557 Metallopeptidase family M24 SPG_RS00920 PF01321 Creatinase/Prolidase N-terminal domain SPG_RS00925 PF03960 ArsC family SPG_RS00935 PF06135 IreB regulatory phosphoprotein SPG_RS00940 PF03652 Holliday junction resolvase SPG_RS00945 PF06949 Protein of unknown function (DUF1292) SPG_RS00950 PF08245 Mur ligase middle domain SPG_RS00950 PF02875 Mur ligase family, glutamate ligase domain SPG_RS00960 PF13091 PLD-like domain SPG_RS00975 PF03477 ATP cone domain SPG_RS00975 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPG_RS01000 PF00338 Ribosomal protein S10p/S20e SPG_RS01005 PF00297 Ribosomal protein L3 SPG_RS01010 PF00573 Ribosomal protein L4/L1 family SPG_RS01015 PF00276 Ribosomal protein L23 SPG_RS01020 PF03947 Ribosomal Proteins L2, C-terminal domain SPG_RS01020 PF00181 Ribosomal Proteins L2, RNA binding domain SPG_RS01025 PF00203 Ribosomal protein S19 SPG_RS01030 PF00237 Ribosomal protein L22p/L17e SPG_RS01035 PF07650 KH domain SPG_RS01035 PF00189 Ribosomal protein S3, C-terminal domain SPG_RS01040 PF00252 Ribosomal protein L16p/L10e SPG_RS01045 PF00831 Ribosomal L29 protein SPG_RS01050 PF00366 Ribosomal protein S17 SPG_RS01055 PF00238 Ribosomal protein L14p/L23e SPG_RS01060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SPG_RS01060 PF00467 KOW motif SPG_RS01065 PF00281 Ribosomal protein L5 SPG_RS01065 PF00673 ribosomal L5P family C-terminus SPG_RS01070 PF00253 Ribosomal protein S14p/S29e SPG_RS01075 PF00410 Ribosomal protein S8 SPG_RS01080 PF00347 Ribosomal protein L6 SPG_RS01085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SPG_RS01090 PF00333 Ribosomal protein S5, N-terminal domain SPG_RS01090 PF03719 Ribosomal protein S5, C-terminal domain SPG_RS01095 PF00327 Ribosomal protein L30p/L7e SPG_RS01100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SPG_RS01105 PF00344 SecY translocase SPG_RS01115 PF01176 Translation initiation factor 1A / IF-1 SPG_RS01120 PF00444 Ribosomal protein L36 SPG_RS01130 PF00411 Ribosomal protein S11 SPG_RS01135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SPG_RS01135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SPG_RS01135 PF01000 RNA polymerase Rpb3/RpoA insert domain SPG_RS01140 PF01196 Ribosomal protein L17 SPG_RS01150 PF05167 Uncharacterised ACR (DUF711) SPG_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS01170 PF00005 ABC transporter SPG_RS01170 PF08402 TOBE domain SPG_RS01190 PF04055 Radical SAM superfamily SPG_RS01195 PF00455 DeoR C terminal sensor domain SPG_RS01195 PF08220 DeoR-like helix-turn-helix domain SPG_RS01200 PF13936 Helix-turn-helix domain SPG_RS01200 PF04198 Putative sugar-binding domain SPG_RS01205 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPG_RS01210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS01215 PF02378 Phosphotransferase system, EIIC SPG_RS01220 PF01228 Glycine radical SPG_RS01220 PF02901 Pyruvate formate lyase-like SPG_RS01225 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPG_RS01230 PF00465 Iron-containing alcohol dehydrogenase SPG_RS01235 PF00133 tRNA synthetases class I (I, L, M and V) SPG_RS01235 PF08264 Anticodon-binding domain of tRNA SPG_RS01235 PF09334 tRNA synthetases class I (M) SPG_RS01235 PF13603 Leucyl-tRNA synthetase, Domain 2 SPG_RS01255 PF05496 Holliday junction DNA helicase RuvB P-loop domain SPG_RS01255 PF17864 RuvB AAA lid domain SPG_RS01255 PF05491 RuvB C-terminal winged helix domain SPG_RS01265 PF01255 Putative undecaprenyl diphosphate synthase SPG_RS01275 PF02163 Peptidase family M50 SPG_RS01280 PF04073 Aminoacyl-tRNA editing domain SPG_RS01280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPG_RS01280 PF03129 Anticodon binding domain SPG_RS01285 PF00232 Glycosyl hydrolase family 1 SPG_RS01290 PF01380 SIS domain SPG_RS01300 PF03714 Bacterial pullanase-associated domain SPG_RS01300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SPG_RS01300 PF00128 Alpha amylase, catalytic domain SPG_RS01305 PF00164 Ribosomal protein S12/S23 SPG_RS01310 PF00177 Ribosomal protein S7p/S5e SPG_RS01315 PF14492 Elongation Factor G, domain II SPG_RS01315 PF03764 Elongation factor G, domain IV SPG_RS01315 PF00009 Elongation factor Tu GTP binding domain SPG_RS01315 PF03144 Elongation factor Tu domain 2 SPG_RS01315 PF00679 Elongation factor G C-terminus SPG_RS01320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPG_RS01320 PF02811 PHP domain SPG_RS01320 PF14480 DNA polymerase III polC-type N-terminus I SPG_RS01320 PF00929 Exonuclease SPG_RS01320 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPG_RS01320 PF11490 DNA polymerase III polC-type N-terminus II SPG_RS01340 PF02073 Thermophilic metalloprotease (M29) SPG_RS01345 PF04226 Transglycosylase associated protein SPG_RS01350 PF01479 S4 domain SPG_RS01350 PF00849 RNA pseudouridylate synthase SPG_RS01360 PF03051 Peptidase C1-like family SPG_RS01365 PF03613 PTS system mannose/fructose/sorbose family IID component SPG_RS01370 PF03609 PTS system sorbose-specific iic component SPG_RS01375 PF03610 PTS system fructose IIA component SPG_RS01375 PF03830 PTS system sorbose subfamily IIB component SPG_RS01380 PF08240 Alcohol dehydrogenase GroES-like domain SPG_RS01380 PF00107 Zinc-binding dehydrogenase SPG_RS01390 PF00860 Permease family SPG_RS01400 PF00809 Pterin binding enzyme SPG_RS01405 PF08245 Mur ligase middle domain SPG_RS01405 PF02875 Mur ligase family, glutamate ligase domain SPG_RS01410 PF01227 GTP cyclohydrolase I SPG_RS01415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SPG_RS01415 PF02152 Dihydroneopterin aldolase SPG_RS01425 PF00572 Ribosomal protein L13 SPG_RS01430 PF00380 Ribosomal protein S9/S16 SPG_RS01445 PF01055 Glycosyl hydrolases family 31 SPG_RS01445 PF16338 Domain of unknown function (DUF4968) SPG_RS01445 PF17137 Domain of unknown function (DUF5110) SPG_RS01445 PF13802 Galactose mutarotase-like SPG_RS01450 PF00255 Glutathione peroxidase SPG_RS01455 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SPG_RS01455 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SPG_RS01455 PF02278 Polysaccharide lyase family 8, super-sandwich domain SPG_RS01460 PF01797 Transposase IS200 like SPG_RS01470 PF00294 pfkB family carbohydrate kinase SPG_RS01490 PF07470 Glycosyl Hydrolase Family 88 SPG_RS01495 PF03830 PTS system sorbose subfamily IIB component SPG_RS01500 PF03609 PTS system sorbose-specific iic component SPG_RS01505 PF03613 PTS system mannose/fructose/sorbose family IID component SPG_RS01520 PF00356 Bacterial regulatory proteins, lacI family SPG_RS01545 PF01795 MraW methylase family SPG_RS01555 PF03793 PASTA domain SPG_RS01555 PF00905 Penicillin binding protein transpeptidase domain SPG_RS01555 PF03717 Penicillin-binding Protein dimerisation domain SPG_RS01560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SPG_RS01560 PF00953 Glycosyl transferase family 4 SPG_RS01565 PF10431 C-terminal, D2-small domain, of ClpB protein SPG_RS01565 PF00004 ATPase family associated with various cellular activities (AAA) SPG_RS01565 PF17871 AAA lid domain SPG_RS01565 PF07724 AAA domain (Cdc48 subfamily) SPG_RS01570 PF02664 S-Ribosylhomocysteinase (LuxS) SPG_RS01575 PF08903 Domain of unknown function (DUF1846) SPG_RS01580 PF16657 Maltogenic Amylase, C-terminal domain SPG_RS01580 PF00128 Alpha amylase, catalytic domain SPG_RS01585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPG_RS01605 PF02706 Chain length determinant protein SPG_RS01610 PF13614 AAA domain SPG_RS01615 PF02397 Bacterial sugar transferase SPG_RS01620 PF03808 Glycosyl transferase WecB/TagA/CpsF family SPG_RS01625 PF04991 LicD family SPG_RS01645 PF02350 UDP-N-acetylglucosamine 2-epimerase SPG_RS01650 PF00483 Nucleotidyl transferase SPG_RS01655 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SPG_RS01660 PF16363 GDP-mannose 4,6 dehydratase SPG_RS01665 PF04321 RmlD substrate binding domain SPG_RS01685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPG_RS01690 PF00754 F5/8 type C domain SPG_RS01690 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal SPG_RS01690 PF12905 Endo-alpha-N-acetylgalactosaminidase SPG_RS01690 PF04650 YSIRK type signal peptide SPG_RS01690 PF17974 Galactose-binding domain-like SPG_RS01690 PF18080 Galactose mutarotase-like fold domain SPG_RS01690 PF17451 Glycosyl hydrolase 101 beta sandwich domain SPG_RS01695 PF00905 Penicillin binding protein transpeptidase domain SPG_RS01695 PF00912 Transglycosylase SPG_RS01700 PF03838 Recombination protein U SPG_RS01705 PF06908 YspA SLOG family SPG_RS01710 PF05103 DivIVA protein SPG_RS01720 PF02926 THUMP domain SPG_RS01720 PF01170 Putative RNA methylase family UPF0020 SPG_RS01725 PF18708 MapZ extracellular C-terminal domain 2 SPG_RS01725 PF18041 MapZ extracellular domain 1 SPG_RS01730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SPG_RS01730 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SPG_RS01735 PF00072 Response regulator receiver domain SPG_RS01735 PF00486 Transcriptional regulatory protein, C terminal SPG_RS01755 PF10509 Galactokinase galactose-binding signature SPG_RS01755 PF00288 GHMP kinases N terminal domain SPG_RS01755 PF08544 GHMP kinases C terminal SPG_RS01765 PF00288 GHMP kinases N terminal domain SPG_RS01765 PF08544 GHMP kinases C terminal SPG_RS01770 PF01070 FMN-dependent dehydrogenase SPG_RS01780 PF07730 Histidine kinase SPG_RS01780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS01785 PF00196 Bacterial regulatory proteins, luxR family SPG_RS01785 PF00072 Response regulator receiver domain SPG_RS01820 PF13333 Integrase core domain SPG_RS01820 PF00665 Integrase core domain SPG_RS01835 PF02378 Phosphotransferase system, EIIC SPG_RS01835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS01840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPG_RS01840 PF05043 Mga helix-turn-helix domain SPG_RS01840 PF08279 HTH domain SPG_RS01845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPG_RS01850 PF01232 Mannitol dehydrogenase Rossmann domain SPG_RS01850 PF08125 Mannitol dehydrogenase C-terminal domain SPG_RS01865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SPG_RS01865 PF05697 Bacterial trigger factor protein (TF) SPG_RS01865 PF05698 Bacterial trigger factor protein (TF) C-terminus SPG_RS01870 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SPG_RS01870 PF14490 Helix-hairpin-helix containing domain SPG_RS01870 PF13538 UvrD-like helicase C-terminal domain SPG_RS01875 PF10502 Signal peptidase, peptidase S26 SPG_RS01880 PF11858 Domain of unknown function (DUF3378) SPG_RS01880 PF01351 Ribonuclease HII SPG_RS01895 PF01713 Smr domain SPG_RS01895 PF00488 MutS domain V SPG_RS01900 PF01235 Sodium:alanine symporter family SPG_RS01915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPG_RS01915 PF02403 Seryl-tRNA synthetase N-terminal domain SPG_RS01925 PF00696 Amino acid kinase family SPG_RS01925 PF13840 ACT domain SPG_RS01930 PF00378 Enoyl-CoA hydratase/isomerase SPG_RS01935 PF01047 MarR family SPG_RS01940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SPG_RS01940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SPG_RS01945 PF00550 Phosphopantetheine attachment site SPG_RS01950 PF03060 Nitronate monooxygenase SPG_RS01955 PF00698 Acyl transferase domain SPG_RS01965 PF02801 Beta-ketoacyl synthase, C-terminal domain SPG_RS01965 PF00109 Beta-ketoacyl synthase, N-terminal domain SPG_RS01970 PF00364 Biotin-requiring enzyme SPG_RS01975 PF07977 FabA-like domain SPG_RS01980 PF02785 Biotin carboxylase C-terminal domain SPG_RS01980 PF00289 Biotin carboxylase, N-terminal domain SPG_RS01980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPG_RS01985 PF01039 Carboxyl transferase domain SPG_RS01990 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SPG_RS02005 PF01029 NusB family SPG_RS02010 PF03780 Asp23 family, cell envelope-related function SPG_RS02015 PF01132 Elongation factor P (EF-P) OB domain SPG_RS02015 PF08207 Elongation factor P (EF-P) KOW-like domain SPG_RS02015 PF09285 Elongation factor P, C-terminal SPG_RS02020 PF02637 GatB domain SPG_RS02020 PF02934 GatB/GatE catalytic domain SPG_RS02025 PF01425 Amidase SPG_RS02030 PF02686 Glu-tRNAGln amidotransferase C subunit SPG_RS02035 PF03144 Elongation factor Tu domain 2 SPG_RS02035 PF00009 Elongation factor Tu GTP binding domain SPG_RS02035 PF16658 Class II release factor RF3, C-terminal domain SPG_RS02045 PF00830 Ribosomal L28 family SPG_RS02050 PF03780 Asp23 family, cell envelope-related function SPG_RS02055 PF13684 Dihydroxyacetone kinase family SPG_RS02055 PF02734 DAK2 domain SPG_RS02060 PF01610 Transposase SPG_RS02060 PF13683 Integrase core domain SPG_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SPG_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SPG_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain SPG_RS02070 PF01842 ACT domain SPG_RS02070 PF10369 Small subunit of acetolactate synthase SPG_RS02075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SPG_RS02075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SPG_RS02090 PF00291 Pyridoxal-phosphate dependent enzyme SPG_RS02090 PF00585 C-terminal regulatory domain of Threonine dehydratase SPG_RS02100 PF00005 ABC transporter SPG_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS02130 PF02673 Bacitracin resistance protein BacA SPG_RS02135 PF11798 IMS family HHH motif SPG_RS02135 PF11799 impB/mucB/samB family C-terminal domain SPG_RS02135 PF00817 impB/mucB/samB family SPG_RS02140 PF02901 Pyruvate formate lyase-like SPG_RS02140 PF01228 Glycine radical SPG_RS02170 PF00480 ROK family SPG_RS02175 PF02378 Phosphotransferase system, EIIC SPG_RS02190 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPG_RS02195 PF00232 Glycosyl hydrolase family 1 SPG_RS02200 PF02378 Phosphotransferase system, EIIC SPG_RS02200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS02205 PF02386 Cation transport protein SPG_RS02210 PF02254 TrkA-N domain SPG_RS02210 PF02080 TrkA-C domain SPG_RS02220 PF07155 ECF-type riboflavin transporter, S component SPG_RS02230 PF12558 ATP-binding cassette cobalt transporter SPG_RS02230 PF00005 ABC transporter SPG_RS02240 PF00588 SpoU rRNA Methylase family SPG_RS02245 PF12822 ECF transporter, substrate-specific component SPG_RS02250 PF01569 PAP2 superfamily SPG_RS02260 PF00583 Acetyltransferase (GNAT) family SPG_RS02265 PF05066 HB1, ASXL, restriction endonuclease HTH domain SPG_RS02275 PF06418 CTP synthase N-terminus SPG_RS02275 PF00117 Glutamine amidotransferase class-I SPG_RS02280 PF02690 Na+/Pi-cotransporter SPG_RS02290 PF00162 Phosphoglycerate kinase SPG_RS02305 PF06081 Aromatic acid exporter family member 1 SPG_RS02310 PF13411 MerR HTH family regulatory protein SPG_RS02315 PF03951 Glutamine synthetase, beta-Grasp domain SPG_RS02315 PF00120 Glutamine synthetase, catalytic domain SPG_RS02325 PF01420 Type I restriction modification DNA specificity domain SPG_RS02335 PF01420 Type I restriction modification DNA specificity domain SPG_RS02340 PF02384 N-6 DNA Methylase SPG_RS02340 PF12161 HsdM N-terminal domain SPG_RS02345 PF00271 Helicase conserved C-terminal domain SPG_RS02345 PF04851 Type III restriction enzyme, res subunit SPG_RS02345 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SPG_RS02345 PF08463 EcoEI R protein C-terminal SPG_RS02360 PF01628 HrcA protein C terminal domain SPG_RS02360 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SPG_RS02365 PF01025 GrpE SPG_RS02370 PF00012 Hsp70 protein SPG_RS02380 PF00226 DnaJ domain SPG_RS02380 PF01556 DnaJ C terminal domain SPG_RS02380 PF00684 DnaJ central domain SPG_RS02390 PF01230 HIT domain SPG_RS02395 PF00005 ABC transporter SPG_RS02420 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SPG_RS02420 PF17203 Single cache domain 3 SPG_RS02420 PF00989 PAS fold SPG_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS02435 PF00664 ABC transporter transmembrane region SPG_RS02435 PF03412 Peptidase C39 family SPG_RS02435 PF00005 ABC transporter SPG_RS02505 PF02517 CPBP intramembrane metalloprotease SPG_RS02515 PF02390 Putative methyltransferase SPG_RS02520 PF17384 RimP C-terminal SH3 domain SPG_RS02520 PF02576 RimP N-terminal domain SPG_RS02525 PF08529 NusA N-terminal domain SPG_RS02525 PF00575 S1 RNA binding domain SPG_RS02525 PF13184 NusA-like KH domain SPG_RS02530 PF04296 Protein of unknown function (DUF448) SPG_RS02535 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SPG_RS02540 PF04760 Translation initiation factor IF-2, N-terminal region SPG_RS02540 PF11987 Translation-initiation factor 2 SPG_RS02540 PF00009 Elongation factor Tu GTP binding domain SPG_RS02545 PF02033 Ribosome-binding factor A SPG_RS02600 PF13673 Acetyltransferase (GNAT) domain SPG_RS02600 PF13302 Acetyltransferase (GNAT) domain SPG_RS02600 PF03352 Methyladenine glycosylase SPG_RS02600 PF00117 Glutamine amidotransferase class-I SPG_RS02600 PF00958 GMP synthase C terminal domain SPG_RS02610 PF10458 Valyl tRNA synthetase tRNA binding arm SPG_RS02610 PF00133 tRNA synthetases class I (I, L, M and V) SPG_RS02610 PF08264 Anticodon-binding domain of tRNA SPG_RS02620 PF17841 BID domain of Bartonella effector protein (Bep) SPG_RS02620 PF02661 Fic/DOC family SPG_RS02630 PF13333 Integrase core domain SPG_RS02630 PF00665 Integrase core domain SPG_RS02630 PF13276 HTH-like domain SPG_RS02645 PF00874 PRD domain SPG_RS02645 PF03123 CAT RNA binding domain SPG_RS02650 PF02378 Phosphotransferase system, EIIC SPG_RS02650 PF00367 phosphotransferase system, EIIB SPG_RS02650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPG_RS02655 PF00232 Glycosyl hydrolase family 1 SPG_RS02660 PF01409 tRNA synthetases class II core domain (F) SPG_RS02660 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SPG_RS02665 PF00583 Acetyltransferase (GNAT) family SPG_RS02670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SPG_RS02670 PF01588 Putative tRNA binding domain SPG_RS02670 PF03147 Ferredoxin-fold anticodon binding domain SPG_RS02670 PF03484 tRNA synthetase B5 domain SPG_RS02670 PF03483 B3/4 domain SPG_RS02690 PF01381 Helix-turn-helix SPG_RS02695 PF01717 Cobalamin-independent synthase, Catalytic domain SPG_RS02695 PF08267 Cobalamin-independent synthase, N-terminal domain SPG_RS02700 PF02219 Methylenetetrahydrofolate reductase SPG_RS02705 PF01138 3' exoribonuclease family, domain 1 SPG_RS02705 PF00575 S1 RNA binding domain SPG_RS02705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SPG_RS02705 PF03725 3' exoribonuclease family, domain 2 SPG_RS02705 PF00013 KH domain SPG_RS02710 PF06426 Serine acetyltransferase, N-terminal SPG_RS02710 PF00132 Bacterial transferase hexapeptide (six repeats) SPG_RS02720 PF01406 tRNA synthetases class I (C) catalytic domain SPG_RS02720 PF09190 DALR domain SPG_RS02725 PF00636 Ribonuclease III domain SPG_RS02730 PF13556 PucR C-terminal helix-turn-helix domain SPG_RS02745 PF12704 MacB-like periplasmic core domain SPG_RS02745 PF02687 FtsX-like permease family SPG_RS02750 PF00005 ABC transporter SPG_RS02755 PF02687 FtsX-like permease family SPG_RS02755 PF12704 MacB-like periplasmic core domain SPG_RS02760 PF00072 Response regulator receiver domain SPG_RS02760 PF00486 Transcriptional regulatory protein, C terminal SPG_RS02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS02765 PF00672 HAMP domain SPG_RS02765 PF00512 His Kinase A (phospho-acceptor) domain SPG_RS02770 PF01116 Fructose-bisphosphate aldolase class-II SPG_RS02775 PF00175 Oxidoreductase NAD-binding domain SPG_RS02775 PF00111 2Fe-2S iron-sulfur cluster binding domain SPG_RS02775 PF00970 Oxidoreductase FAD-binding domain SPG_RS02785 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS02790 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS02795 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS02800 PF00005 ABC transporter SPG_RS02805 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SPG_RS02805 PF17768 RecJ OB domain SPG_RS02805 PF01368 DHH family SPG_RS02805 PF02272 DHHA1 domain SPG_RS02810 PF17770 Ribonuclease J C-terminal domain SPG_RS02810 PF00753 Metallo-beta-lactamase superfamily SPG_RS02810 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SPG_RS02815 PF00756 Putative esterase SPG_RS02835 PF02151 UvrB/uvrC motif SPG_RS02835 PF08459 UvrC Helix-hairpin-helix N-terminal SPG_RS02835 PF01541 GIY-YIG catalytic domain SPG_RS02845 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS02855 PF01546 Peptidase family M20/M25/M40 SPG_RS02860 PF03167 Uracil DNA glycosylase superfamily SPG_RS02870 PF05525 Branched-chain amino acid transport protein SPG_RS02875 PF05343 M42 glutamyl aminopeptidase SPG_RS02890 PF00298 Ribosomal protein L11, RNA binding domain SPG_RS02890 PF03946 Ribosomal protein L11, N-terminal domain SPG_RS02895 PF00687 Ribosomal protein L1p/L10e family SPG_RS02900 PF01610 Transposase SPG_RS02900 PF13683 Integrase core domain SPG_RS02930 PF00005 ABC transporter SPG_RS02960 PF00082 Subtilase family SPG_RS02975 PF03611 PTS system sugar-specific permease component SPG_RS02985 PF02837 Glycosyl hydrolases family 2, sugar binding domain SPG_RS02985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SPG_RS02985 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 SPG_RS02985 PF00703 Glycosyl hydrolases family 2 SPG_RS02985 PF16355 Domain of unknown function (DUF4982) SPG_RS03010 PF04055 Radical SAM superfamily SPG_RS03010 PF16199 Radical_SAM C-terminal domain SPG_RS03015 PF16199 Radical_SAM C-terminal domain SPG_RS03015 PF04055 Radical SAM superfamily SPG_RS03020 PF06962 Putative rRNA methylase SPG_RS03030 PF00999 Sodium/hydrogen exchanger family SPG_RS03040 PF02683 Cytochrome C biogenesis protein transmembrane region SPG_RS03045 PF08534 Redoxin SPG_RS03050 PF01625 Peptide methionine sulfoxide reductase SPG_RS03050 PF01641 SelR domain SPG_RS03055 PF00072 Response regulator receiver domain SPG_RS03055 PF12833 Helix-turn-helix domain SPG_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS03060 PF00672 HAMP domain SPG_RS03060 PF02743 Cache domain SPG_RS03060 PF06580 Histidine kinase SPG_RS03065 PF04260 Protein of unknown function (DUF436) SPG_RS03070 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SPG_RS03070 PF00746 LPXTG cell wall anchor motif SPG_RS03070 PF07501 G5 domain SPG_RS03070 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SPG_RS03075 PF04715 Anthranilate synthase component I, N terminal region SPG_RS03075 PF00425 chorismate binding enzyme SPG_RS03090 PF00480 ROK family SPG_RS03095 PF00303 Thymidylate synthase SPG_RS03110 PF16360 GTP-binding GTPase Middle Region SPG_RS03110 PF13167 GTP-binding GTPase N-terminal SPG_RS03110 PF01926 50S ribosome-binding GTPase SPG_RS03115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SPG_RS03115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SPG_RS03120 PF00753 Metallo-beta-lactamase superfamily SPG_RS03120 PF12706 Beta-lactamase superfamily domain SPG_RS03125 PF00106 short chain dehydrogenase SPG_RS03130 PF03466 LysR substrate binding domain SPG_RS03130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPG_RS03140 PF00581 Rhodanese-like domain SPG_RS03150 PF00849 RNA pseudouridylate synthase SPG_RS03150 PF01479 S4 domain SPG_RS03175 PF00005 ABC transporter SPG_RS03180 PF02875 Mur ligase family, glutamate ligase domain SPG_RS03180 PF08245 Mur ligase middle domain SPG_RS03185 PF04101 Glycosyltransferase family 28 C-terminal domain SPG_RS03185 PF03033 Glycosyltransferase family 28 N-terminal domain SPG_RS03190 PF08478 POTRA domain, FtsQ-type SPG_RS03195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPG_RS03200 PF00156 Phosphoribosyl transferase domain SPG_RS03225 PF00005 ABC transporter SPG_RS03230 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS03240 PF00005 ABC transporter SPG_RS03245 PF00005 ABC transporter SPG_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS03260 PF01070 FMN-dependent dehydrogenase SPG_RS03265 PF01336 OB-fold nucleic acid binding domain SPG_RS03265 PF00152 tRNA synthetases class II (D, K and N) SPG_RS03270 PF01070 FMN-dependent dehydrogenase SPG_RS03285 PF02110 Hydroxyethylthiazole kinase family SPG_RS03290 PF02581 Thiamine monophosphate synthase SPG_RS03300 PF00005 ABC transporter SPG_RS03310 PF03070 TENA/THI-4/PQQC family SPG_RS03320 PF02110 Hydroxyethylthiazole kinase family SPG_RS03325 PF02581 Thiamine monophosphate synthase SPG_RS03330 PF08543 Phosphomethylpyrimidine kinase SPG_RS03335 PF03965 Penicillinase repressor SPG_RS03345 PF00403 Heavy-metal-associated domain SPG_RS03350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SPG_RS03350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SPG_RS03350 PF00205 Thiamine pyrophosphate enzyme, central domain SPG_RS03365 PF13358 DDE superfamily endonuclease SPG_RS03375 PF00232 Glycosyl hydrolase family 1 SPG_RS03380 PF01238 Phosphomannose isomerase type I SPG_RS03385 PF00209 Sodium:neurotransmitter symporter family SPG_RS03390 PF13411 MerR HTH family regulatory protein SPG_RS03390 PF07739 TipAS antibiotic-recognition domain SPG_RS03395 PF13344 Haloacid dehalogenase-like hydrolase SPG_RS03395 PF00293 NUDIX domain SPG_RS03405 PF02645 Uncharacterised protein, DegV family COG1307 SPG_RS03415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPG_RS03430 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SPG_RS03435 PF13458 Periplasmic binding protein SPG_RS03440 PF02653 Branched-chain amino acid transport system / permease component SPG_RS03445 PF11862 Domain of unknown function (DUF3382) SPG_RS03445 PF02653 Branched-chain amino acid transport system / permease component SPG_RS03450 PF00005 ABC transporter SPG_RS03450 PF12399 Branched-chain amino acid ATP-binding cassette transporter SPG_RS03455 PF00005 ABC transporter SPG_RS03460 PF01743 Poly A polymerase head domain SPG_RS03460 PF00571 CBS domain SPG_RS03465 PF00472 RF-1 domain SPG_RS03465 PF03462 PCRF domain SPG_RS03470 PF00005 ABC transporter SPG_RS03475 PF02687 FtsX-like permease family SPG_RS03475 PF18075 FtsX extracellular domain SPG_RS03490 PF00271 Helicase conserved C-terminal domain SPG_RS03490 PF00270 DEAD/DEAH box helicase SPG_RS03495 PF00438 S-adenosylmethionine synthetase, N-terminal domain SPG_RS03495 PF02773 S-adenosylmethionine synthetase, C-terminal domain SPG_RS03495 PF02772 S-adenosylmethionine synthetase, central domain SPG_RS03500 PF01180 Dihydroorotate dehydrogenase SPG_RS03510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SPG_RS03510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SPG_RS03515 PF06265 Protein of unknown function (DUF1027) SPG_RS03520 PF04055 Radical SAM superfamily SPG_RS03530 PF12848 ABC transporter SPG_RS03530 PF00005 ABC transporter SPG_RS03535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPG_RS03550 PF00886 Ribosomal protein S16 SPG_RS03565 PF05239 PRC-barrel domain SPG_RS03565 PF01782 RimM N-terminal domain SPG_RS03570 PF01746 tRNA (Guanine-1)-methyltransferase SPG_RS03575 PF03477 ATP cone domain SPG_RS03575 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPG_RS03585 PF02229 Transcriptional Coactivator p15 (PC4) SPG_RS03595 PF02632 BioY family SPG_RS03600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPG_RS03600 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPG_RS03605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SPG_RS03610 PF00005 ABC transporter SPG_RS03615 PF12704 MacB-like periplasmic core domain SPG_RS03615 PF02687 FtsX-like permease family SPG_RS03620 PF09334 tRNA synthetases class I (M) SPG_RS03620 PF01588 Putative tRNA binding domain SPG_RS03640 PF00248 Aldo/keto reductase family SPG_RS03670 PF01433 Peptidase family M1 domain SPG_RS03670 PF11838 ERAP1-like C-terminal domain SPG_RS03675 PF00072 Response regulator receiver domain SPG_RS03675 PF00486 Transcriptional regulatory protein, C terminal SPG_RS03680 PF00512 His Kinase A (phospho-acceptor) domain SPG_RS03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS03695 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPG_RS03695 PF02811 PHP domain SPG_RS03695 PF14579 Helix-hairpin-helix motif SPG_RS03695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPG_RS03695 PF11490 DNA polymerase III polC-type N-terminus II SPG_RS03695 PF00929 Exonuclease SPG_RS03700 PF01098 Cell cycle protein SPG_RS03705 PF01965 DJ-1/PfpI family SPG_RS03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS03715 PF00204 DNA gyrase B SPG_RS03715 PF01751 Toprim domain SPG_RS03715 PF00986 DNA gyrase B subunit, carboxyl terminus SPG_RS03720 PF06160 Septation ring formation regulator, EzrA SPG_RS03735 PF00293 NUDIX domain SPG_RS03755 PF07724 AAA domain (Cdc48 subfamily) SPG_RS03755 PF10431 C-terminal, D2-small domain, of ClpB protein SPG_RS03755 PF00004 ATPase family associated with various cellular activities (AAA) SPG_RS03755 PF17871 AAA lid domain SPG_RS03760 PF08796 Protein of unknown function (DUF1797) SPG_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS03770 PF00005 ABC transporter SPG_RS03775 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SPG_RS03775 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SPG_RS03780 PF01256 Carbohydrate kinase SPG_RS03785 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SPG_RS03790 PF01676 Metalloenzyme superfamily SPG_RS03800 PF01048 Phosphorylase superfamily SPG_RS03815 PF17440 Thiol-activated cytolysin beta sandwich domain SPG_RS03815 PF01289 Thiol-activated cytolysin SPG_RS03820 PF01048 Phosphorylase superfamily SPG_RS03830 PF01649 Ribosomal protein S20 SPG_RS03835 PF00485 Phosphoribulokinase / Uridine kinase family SPG_RS03845 PF05175 Methyltransferase small domain SPG_RS03850 PF02885 Glycosyl transferase family, helical bundle domain SPG_RS03850 PF00591 Glycosyl transferase family, a/b domain SPG_RS03850 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SPG_RS03855 PF01791 DeoC/LacD family aldolase SPG_RS03860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPG_RS03865 PF02608 ABC transporter substrate-binding protein PnrA-like SPG_RS03870 PF00005 ABC transporter SPG_RS03875 PF02653 Branched-chain amino acid transport system / permease component SPG_RS03880 PF02653 Branched-chain amino acid transport system / permease component SPG_RS03900 PF02660 Glycerol-3-phosphate acyltransferase SPG_RS03905 PF00986 DNA gyrase B subunit, carboxyl terminus SPG_RS03905 PF01751 Toprim domain SPG_RS03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS03905 PF00204 DNA gyrase B SPG_RS03915 PF00521 DNA gyrase/topoisomerase IV, subunit A SPG_RS03915 PF03989 DNA gyrase C-terminal domain, beta-propeller SPG_RS03920 PF01063 Amino-transferase class IV SPG_RS03925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPG_RS03940 PF01470 Pyroglutamyl peptidase SPG_RS03960 PF00575 S1 RNA binding domain SPG_RS03965 PF13683 Integrase core domain SPG_RS03965 PF01610 Transposase SPG_RS03980 PF13185 GAF domain SPG_RS03985 PF12169 DNA polymerase III subunits gamma and tau domain III SPG_RS03995 PF00005 ABC transporter SPG_RS04000 PF01458 Uncharacterized protein family (UPF0051) SPG_RS04005 PF00266 Aminotransferase class-V SPG_RS04010 PF01592 NifU-like N terminal domain SPG_RS04015 PF01458 Uncharacterized protein family (UPF0051) SPG_RS04025 PF00768 D-alanyl-D-alanine carboxypeptidase SPG_RS04025 PF07943 Penicillin-binding protein 5, C-terminal domain SPG_RS04030 PF01594 AI-2E family transporter SPG_RS04040 PF00455 DeoR C terminal sensor domain SPG_RS04040 PF08220 DeoR-like helix-turn-helix domain SPG_RS04045 PF00294 pfkB family carbohydrate kinase SPG_RS04050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPG_RS04050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS04055 PF01580 FtsK/SpoIIIE family SPG_RS04055 PF17854 FtsK alpha domain SPG_RS04055 PF09397 Ftsk gamma domain SPG_RS04065 PF00266 Aminotransferase class-V SPG_RS04070 PF02926 THUMP domain SPG_RS04070 PF02568 Thiamine biosynthesis protein (ThiI) SPG_RS04095 PF02384 N-6 DNA Methylase SPG_RS04100 PF01420 Type I restriction modification DNA specificity domain SPG_RS04115 PF02899 Phage integrase, N-terminal SAM-like domain SPG_RS04115 PF00589 Phage integrase family SPG_RS04125 PF04851 Type III restriction enzyme, res subunit SPG_RS04125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SPG_RS04125 PF00271 Helicase conserved C-terminal domain SPG_RS04125 PF08463 EcoEI R protein C-terminal SPG_RS04135 PF02863 Arginine repressor, C-terminal domain SPG_RS04135 PF01316 Arginine repressor, DNA binding domain SPG_RS04140 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPG_RS04140 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPG_RS04140 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SPG_RS04145 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPG_RS04145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPG_RS04145 PF14579 Helix-hairpin-helix motif SPG_RS04145 PF01336 OB-fold nucleic acid binding domain SPG_RS04145 PF02811 PHP domain SPG_RS04150 PF00365 Phosphofructokinase SPG_RS04160 PF14659 Phage integrase, N-terminal SAM-like domain SPG_RS04160 PF00589 Phage integrase family SPG_RS04195 PF09323 Domain of unknown function (DUF1980) SPG_RS04200 PF03773 Predicted permease SPG_RS04210 PF09371 Tex-like protein N-terminal domain SPG_RS04210 PF17674 HHH domain SPG_RS04210 PF00575 S1 RNA binding domain SPG_RS04210 PF16921 Tex protein YqgF-like domain SPG_RS04215 PF10263 SprT-like family SPG_RS04215 PF17283 SprT-like zinc ribbon domain SPG_RS04230 PF00005 ABC transporter SPG_RS04235 PF02687 FtsX-like permease family SPG_RS04245 PF13936 Helix-turn-helix domain SPG_RS04250 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SPG_RS04250 PF01276 Orn/Lys/Arg decarboxylase, major domain SPG_RS04260 PF17284 Spermidine synthase tetramerisation domain SPG_RS04265 PF16653 Saccharopine dehydrogenase C-terminal domain SPG_RS04265 PF03435 Saccharopine dehydrogenase NADP binding domain SPG_RS04270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SPG_RS04275 PF04371 Porphyromonas-type peptidyl-arginine deiminase SPG_RS04280 PF00795 Carbon-nitrogen hydrolase SPG_RS04305 PF03466 LysR substrate binding domain SPG_RS04305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPG_RS04310 PF01252 Signal peptidase (SPase) II SPG_RS04315 PF01479 S4 domain SPG_RS04315 PF00849 RNA pseudouridylate synthase SPG_RS04330 PF00171 Aldehyde dehydrogenase family SPG_RS04335 PF03807 NADP oxidoreductase coenzyme F420-dependent SPG_RS04335 PF14748 Pyrroline-5-carboxylate reductase dimerisation SPG_RS04340 PF02223 Thymidylate kinase SPG_RS04345 PF09115 DNA polymerase III, delta subunit, C terminal SPG_RS04350 PF06156 Initiation control protein YabA SPG_RS04355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SPG_RS04390 PF01134 Glucose inhibited division protein A SPG_RS04395 PF00696 Amino acid kinase family SPG_RS04400 PF01765 Ribosome recycling factor SPG_RS04405 PF17783 CvfB-like winged helix domain SPG_RS04405 PF13509 S1 domain SPG_RS04410 PF06855 YozE SAM-like fold SPG_RS04415 PF02562 PhoH-like protein SPG_RS04420 PF13302 Acetyltransferase (GNAT) domain SPG_RS04425 PF10531 SLBB domain SPG_RS04430 PF00753 Metallo-beta-lactamase superfamily SPG_RS04430 PF13567 Domain of unknown function (DUF4131) SPG_RS04430 PF03772 Competence protein SPG_RS04440 PF00005 ABC transporter SPG_RS04450 PF05198 Translation initiation factor IF-3, N-terminal domain SPG_RS04450 PF00707 Translation initiation factor IF-3, C-terminal domain SPG_RS04455 PF01632 Ribosomal protein L35 SPG_RS04460 PF00453 Ribosomal protein L20 SPG_RS04465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPG_RS04470 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SPG_RS04470 PF00175 Oxidoreductase NAD-binding domain SPG_RS04470 PF00970 Oxidoreductase FAD-binding domain SPG_RS04475 PF01180 Dihydroorotate dehydrogenase SPG_RS04480 PF17890 Peptidoglycan hydrolase LytB WW-like domain SPG_RS04480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPG_RS04480 PF01473 Putative cell wall binding repeat SPG_RS04480 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain SPG_RS04485 PF05670 NFACT protein RNA binding domain SPG_RS04490 PF02130 Uncharacterized protein family UPF0054 SPG_RS04495 PF01219 Prokaryotic diacylglycerol kinase SPG_RS04500 PF07650 KH domain SPG_RS04500 PF01926 50S ribosome-binding GTPase SPG_RS04505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SPG_RS04505 PF06827 Zinc finger found in FPG and IleRS SPG_RS04505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SPG_RS04510 PF01121 Dephospho-CoA kinase SPG_RS04515 PF07690 Major Facilitator Superfamily SPG_RS04515 PF00083 Sugar (and other) transporter SPG_RS04520 PF00471 Ribosomal protein L33 SPG_RS04530 PF00773 RNB domain SPG_RS04530 PF00575 S1 RNA binding domain SPG_RS04530 PF17876 Cold shock domain SPG_RS04530 PF08206 Ribonuclease B OB domain SPG_RS04535 PF01668 SmpB protein SPG_RS04540 PF09313 Domain of unknown function (DUF1971) SPG_RS04540 PF03848 Tellurite resistance protein TehB SPG_RS04550 PF01432 Peptidase family M3 SPG_RS04550 PF08439 Oligopeptidase F SPG_RS04555 PF01596 O-methyltransferase SPG_RS04580 PF04073 Aminoacyl-tRNA editing domain SPG_RS04595 PF14602 Hexapeptide repeat of succinyl-transferase SPG_RS04595 PF12804 MobA-like NTP transferase domain SPG_RS04595 PF00132 Bacterial transferase hexapeptide (six repeats) SPG_RS04600 PF00293 NUDIX domain SPG_RS04610 PF01048 Phosphorylase superfamily SPG_RS04615 PF08279 HTH domain SPG_RS04615 PF04394 Protein of unknown function, DUF536 SPG_RS04620 PF11490 DNA polymerase III polC-type N-terminus II SPG_RS04620 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPG_RS04620 PF00929 Exonuclease SPG_RS04620 PF02811 PHP domain SPG_RS04620 PF14579 Helix-hairpin-helix motif SPG_RS04620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPG_RS04625 PF03009 Glycerophosphoryl diester phosphodiesterase family SPG_RS04650 PF02683 Cytochrome C biogenesis protein transmembrane region SPG_RS04655 PF08534 Redoxin SPG_RS04660 PF13520 Amino acid permease SPG_RS04665 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SPG_RS04665 PF01297 Zinc-uptake complex component A periplasmic SPG_RS04705 PF01741 Large-conductance mechanosensitive channel, MscL SPG_RS04715 PF06177 QueT transporter SPG_RS04725 PF01118 Semialdehyde dehydrogenase, NAD binding domain SPG_RS04725 PF02774 Semialdehyde dehydrogenase, dimerisation domain SPG_RS04730 PF00701 Dihydrodipicolinate synthetase family SPG_RS04735 PF10396 GTP-binding protein TrmE N-terminus SPG_RS04735 PF12631 MnmE helical domain SPG_RS04735 PF01926 50S ribosome-binding GTPase SPG_RS04740 PF01361 Tautomerase enzyme SPG_RS04745 PF00265 Thymidine kinase SPG_RS04750 PF00472 RF-1 domain SPG_RS04750 PF03462 PCRF domain SPG_RS04755 PF05175 Methyltransferase small domain SPG_RS04770 PF00464 Serine hydroxymethyltransferase SPG_RS04790 PF05958 tRNA (Uracil-5-)-methyltransferase SPG_RS04815 PF01032 FecCD transport family SPG_RS04820 PF01032 FecCD transport family SPG_RS04825 PF00005 ABC transporter SPG_RS04840 PF01443 Viral (Superfamily 1) RNA helicase SPG_RS04840 PF03389 MobA/MobL family SPG_RS04840 PF17841 BID domain of Bartonella effector protein (Bep) SPG_RS04870 PF00239 Resolvase, N terminal domain SPG_RS04870 PF02796 Helix-turn-helix domain of resolvase SPG_RS04895 PF00781 Diacylglycerol kinase catalytic domain SPG_RS04900 PF00128 Alpha amylase, catalytic domain SPG_RS04900 PF02903 Alpha amylase, N-terminal ig-like domain SPG_RS04945 PF16363 GDP-mannose 4,6 dehydratase SPG_RS04965 PF01381 Helix-turn-helix SPG_RS04975 PF01098 Cell cycle protein SPG_RS04980 PF00311 Phosphoenolpyruvate carboxylase SPG_RS04995 PF00005 ABC transporter SPG_RS04995 PF09383 NIL domain SPG_RS05000 PF10410 DnaB-helicase binding domain of primase SPG_RS05000 PF08275 DNA primase catalytic core, N-terminal domain SPG_RS05000 PF01807 CHC2 zinc finger SPG_RS05005 PF04539 Sigma-70 region 3 SPG_RS05005 PF04545 Sigma-70, region 4 SPG_RS05005 PF04542 Sigma-70 region 2 SPG_RS05005 PF00140 Sigma-70 factor, region 1.2 SPG_RS05005 PF03979 Sigma-70 factor, region 1.1 SPG_RS05010 PF01883 Iron-sulfur cluster assembly protein SPG_RS05015 PF00534 Glycosyl transferases group 1 SPG_RS05015 PF13439 Glycosyltransferase Family 4 SPG_RS05020 PF13439 Glycosyltransferase Family 4 SPG_RS05020 PF00534 Glycosyl transferases group 1 SPG_RS05035 PF09269 Domain of unknown function (DUF1967) SPG_RS05035 PF01926 50S ribosome-binding GTPase SPG_RS05035 PF01018 GTP1/OBG SPG_RS05045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPG_RS05055 PF00571 CBS domain SPG_RS05055 PF07085 DRTGG domain SPG_RS05055 PF00392 Bacterial regulatory proteins, gntR family SPG_RS05055 PF03061 Thioesterase superfamily SPG_RS05060 PF00557 Metallopeptidase family M24 SPG_RS05075 PF13361 UvrD-like helicase C-terminal domain SPG_RS05075 PF00580 UvrD/REP helicase N-terminal domain SPG_RS05080 PF04002 RadC-like JAB domain SPG_RS05085 PF07722 Peptidase C26 SPG_RS05090 PF06971 Putative DNA-binding protein N-terminus SPG_RS05090 PF02629 CoA binding domain SPG_RS05105 PF00266 Aminotransferase class-V SPG_RS05110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPG_RS05110 PF14572 Phosphoribosyl synthetase-associated domain SPG_RS05120 PF04607 Region found in RelA / SpoT proteins SPG_RS05125 PF01513 ATP-NAD kinase SPG_RS05130 PF00849 RNA pseudouridylate synthase SPG_RS05135 PF01515 Phosphate acetyl/butaryl transferase SPG_RS05140 PF02575 YbaB/EbfC DNA-binding family SPG_RS05160 PF01016 Ribosomal L27 protein SPG_RS05175 PF01687 Riboflavin kinase SPG_RS05175 PF06574 FAD synthetase SPG_RS05180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPG_RS05180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPG_RS05185 PF02645 Uncharacterised protein, DegV family COG1307 SPG_RS05190 PF00216 Bacterial DNA-binding protein SPG_RS05195 PF00005 ABC transporter SPG_RS05195 PF12848 ABC transporter SPG_RS05195 PF16326 ABC transporter C-terminal domain SPG_RS05210 PF00533 BRCA1 C Terminus (BRCT) domain SPG_RS05210 PF01653 NAD-dependent DNA ligase adenylation domain SPG_RS05210 PF03120 NAD-dependent DNA ligase OB-fold domain SPG_RS05210 PF12826 Helix-hairpin-helix motif SPG_RS05210 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SPG_RS05225 PF00171 Aldehyde dehydrogenase family SPG_RS05230 PF02806 Alpha amylase, C-terminal all-beta domain SPG_RS05230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SPG_RS05230 PF00128 Alpha amylase, catalytic domain SPG_RS05235 PF00483 Nucleotidyl transferase SPG_RS05240 PF00483 Nucleotidyl transferase SPG_RS05245 PF00534 Glycosyl transferases group 1 SPG_RS05245 PF08323 Starch synthase catalytic domain SPG_RS05260 PF02595 Glycerate kinase family SPG_RS05270 PF03952 Enolase, N-terminal domain SPG_RS05270 PF00113 Enolase, C-terminal TIM barrel domain SPG_RS05295 PF12705 PD-(D/E)XK nuclease superfamily SPG_RS05300 PF12705 PD-(D/E)XK nuclease superfamily SPG_RS05300 PF00580 UvrD/REP helicase N-terminal domain SPG_RS05300 PF13361 UvrD-like helicase C-terminal domain SPG_RS05310 PF04650 YSIRK type signal peptide SPG_RS05310 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SPG_RS05310 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SPG_RS05310 PF00746 LPXTG cell wall anchor motif SPG_RS05310 PF07581 The GLUG motif SPG_RS05310 PF07501 G5 domain SPG_RS05315 PF00746 LPXTG cell wall anchor motif SPG_RS05315 PF07501 G5 domain SPG_RS05315 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SPG_RS05315 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SPG_RS05325 PF01926 50S ribosome-binding GTPase SPG_RS05330 PF01351 Ribonuclease HII SPG_RS05335 PF00654 Voltage gated chloride channel SPG_RS05340 PF00589 Phage integrase family SPG_RS05345 PF03099 Biotin/lipoate A/B protein ligase family SPG_RS05345 PF10437 Bacterial lipoate protein ligase C-terminus SPG_RS05350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPG_RS05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPG_RS05355 PF02817 e3 binding domain SPG_RS05355 PF00364 Biotin-requiring enzyme SPG_RS05355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SPG_RS05360 PF02780 Transketolase, C-terminal domain SPG_RS05360 PF02779 Transketolase, pyrimidine binding domain SPG_RS05365 PF00676 Dehydrogenase E1 component SPG_RS05370 PF01554 MatE SPG_RS05380 PF01979 Amidohydrolase family SPG_RS05385 PF00293 NUDIX domain SPG_RS05390 PF03167 Uracil DNA glycosylase superfamily SPG_RS05400 PF13419 Haloacid dehalogenase-like hydrolase SPG_RS05415 PF05524 PEP-utilising enzyme, N-terminal SPG_RS05415 PF00391 PEP-utilising enzyme, mobile domain SPG_RS05415 PF02896 PEP-utilising enzyme, TIM barrel domain SPG_RS05420 PF00381 PTS HPr component phosphorylation site SPG_RS05425 PF00462 Glutaredoxin SPG_RS05430 PF08343 Ribonucleotide reductase N-terminal SPG_RS05430 PF00317 Ribonucleotide reductase, all-alpha domain SPG_RS05430 PF02867 Ribonucleotide reductase, barrel domain SPG_RS05435 PF00268 Ribonucleotide reductase, small chain SPG_RS05440 PF00455 DeoR C terminal sensor domain SPG_RS05440 PF08220 DeoR-like helix-turn-helix domain SPG_RS05445 PF00232 Glycosyl hydrolase family 1 SPG_RS05450 PF02378 Phosphotransferase system, EIIC SPG_RS05450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS05455 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPG_RS05460 PF00874 PRD domain SPG_RS05460 PF03123 CAT RNA binding domain SPG_RS05465 PF01791 DeoC/LacD family aldolase SPG_RS05470 PF00294 pfkB family carbohydrate kinase SPG_RS05475 PF02502 Ribose/Galactose Isomerase SPG_RS05480 PF02502 Ribose/Galactose Isomerase SPG_RS05485 PF01263 Aldose 1-epimerase SPG_RS05515 PF00679 Elongation factor G C-terminus SPG_RS05515 PF00009 Elongation factor Tu GTP binding domain SPG_RS05515 PF06421 GTP-binding protein LepA C-terminus SPG_RS05515 PF03144 Elongation factor Tu domain 2 SPG_RS05520 PF00149 Calcineurin-like phosphoesterase SPG_RS05525 PF13476 AAA domain SPG_RS05530 PF01316 Arginine repressor, DNA binding domain SPG_RS05530 PF02863 Arginine repressor, C-terminal domain SPG_RS05535 PF01728 FtsJ-like methyltransferase SPG_RS05535 PF01479 S4 domain SPG_RS05540 PF00348 Polyprenyl synthetase SPG_RS05545 PF02609 Exonuclease VII small subunit SPG_RS05550 PF13742 OB-fold nucleic acid binding domain SPG_RS05550 PF02601 Exonuclease VII, large subunit SPG_RS05555 PF00485 Phosphoribulokinase / Uridine kinase family SPG_RS05570 PF16198 tRNA pseudouridylate synthase B C-terminal domain SPG_RS05570 PF01509 TruB family pseudouridylate synthase (N terminal domain) SPG_RS05595 PF04203 Sortase domain SPG_RS05600 PF00521 DNA gyrase/topoisomerase IV, subunit A SPG_RS05600 PF03989 DNA gyrase C-terminal domain, beta-propeller SPG_RS05605 PF00056 lactate/malate dehydrogenase, NAD binding domain SPG_RS05605 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SPG_RS05610 PF07885 Ion channel SPG_RS05625 PF00753 Metallo-beta-lactamase superfamily SPG_RS05630 PF00672 HAMP domain SPG_RS05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS05630 PF13426 PAS domain SPG_RS05630 PF00512 His Kinase A (phospho-acceptor) domain SPG_RS05635 PF00072 Response regulator receiver domain SPG_RS05635 PF00486 Transcriptional regulatory protein, C terminal SPG_RS05640 PF00730 HhH-GPD superfamily base excision DNA repair protein SPG_RS05640 PF14815 NUDIX domain SPG_RS05645 PF01268 Formate--tetrahydrofolate ligase SPG_RS05655 PF02441 Flavoprotein SPG_RS05660 PF12822 ECF transporter, substrate-specific component SPG_RS05670 PF02829 3H domain SPG_RS05670 PF08279 HTH domain SPG_RS05690 PF17757 UvrB interaction domain SPG_RS05690 PF12344 Ultra-violet resistance protein B SPG_RS05690 PF02151 UvrB/uvrC motif SPG_RS05690 PF00271 Helicase conserved C-terminal domain SPG_RS05690 PF04851 Type III restriction enzyme, res subunit SPG_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS05705 PF00005 ABC transporter SPG_RS05710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SPG_RS05710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SPG_RS05715 PF00448 SRP54-type protein, GTPase domain SPG_RS05715 PF02881 SRP54-type protein, helical bundle domain SPG_RS05730 PF06470 SMC proteins Flexible Hinge Domain SPG_RS05730 PF02463 RecF/RecN/SMC N terminal domain SPG_RS05735 PF14622 Ribonuclease-III-like SPG_RS05735 PF00035 Double-stranded RNA binding motif SPG_RS05745 PF00478 IMP dehydrogenase / GMP reductase domain SPG_RS05770 PF00694 Aconitase C-terminal domain SPG_RS05780 PF00180 Isocitrate/isopropylmalate dehydrogenase SPG_RS05785 PF00180 Isocitrate/isopropylmalate dehydrogenase SPG_RS05790 PF08502 LeuA allosteric (dimerisation) domain SPG_RS05790 PF00682 HMGL-like SPG_RS05805 PF04304 Protein of unknown function (DUF454) SPG_RS05810 PF01396 Topoisomerase DNA binding C4 zinc finger SPG_RS05810 PF01131 DNA topoisomerase SPG_RS05810 PF01751 Toprim domain SPG_RS05820 PF18255 DNA processing protein A sterile alpha motif domain SPG_RS05820 PF02481 DNA recombination-mediator protein A SPG_RS05825 PF12804 MobA-like NTP transferase domain SPG_RS05840 PF08240 Alcohol dehydrogenase GroES-like domain SPG_RS05845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SPG_RS05855 PF04991 LicD family SPG_RS05860 PF04991 LicD family SPG_RS05865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPG_RS05865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPG_RS05865 PF02142 MGS-like domain SPG_RS05870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SPG_RS05870 PF00117 Glutamine amidotransferase class-I SPG_RS05875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPG_RS05875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPG_RS05880 PF00156 Phosphoribosyl transferase domain SPG_RS05885 PF10576 Iron-sulfur binding domain of endonuclease III SPG_RS05885 PF00633 Helix-hairpin-helix motif SPG_RS05885 PF00730 HhH-GPD superfamily base excision DNA repair protein SPG_RS05900 PF00005 ABC transporter SPG_RS05900 PF12848 ABC transporter SPG_RS05900 PF16326 ABC transporter C-terminal domain SPG_RS05905 PF01435 Peptidase family M48 SPG_RS05910 PF04011 LemA family SPG_RS05915 PF02527 rRNA small subunit methyltransferase G SPG_RS05920 PF00860 Permease family SPG_RS05925 PF02881 SRP54-type protein, helical bundle domain SPG_RS05925 PF00448 SRP54-type protein, GTPase domain SPG_RS05925 PF02978 Signal peptide binding domain SPG_RS05930 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SPG_RS05940 PF01966 HD domain SPG_RS05955 PF01245 Ribosomal protein L19 SPG_RS05960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SPG_RS05965 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SPG_RS05970 PF00800 Prephenate dehydratase SPG_RS05970 PF01817 Chorismate mutase type II SPG_RS05970 PF01842 ACT domain SPG_RS05975 PF00258 Flavodoxin SPG_RS05980 PF02272 DHHA1 domain SPG_RS05980 PF01368 DHH family SPG_RS05985 PF01197 Ribosomal protein L31 SPG_RS06000 PF13358 DDE superfamily endonuclease SPG_RS06010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SPG_RS06010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SPG_RS06020 PF00664 ABC transporter transmembrane region SPG_RS06020 PF00005 ABC transporter SPG_RS06020 PF03412 Peptidase C39 family SPG_RS06065 PF01813 ATP synthase subunit D SPG_RS06070 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPG_RS06070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPG_RS06075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPG_RS06075 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPG_RS06075 PF16886 ATPsynthase alpha/beta subunit N-term extension SPG_RS06080 PF01990 ATP synthase (F/14-kDa) subunit SPG_RS06095 PF00137 ATP synthase subunit C SPG_RS06100 PF01496 V-type ATPase 116kDa subunit family SPG_RS06110 PF00480 ROK family SPG_RS06115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPG_RS06115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPG_RS06120 PF02012 BNR/Asp-box repeat SPG_RS06120 PF13088 BNR repeat-like domain SPG_RS06120 PF02973 Sialidase, N-terminal domain SPG_RS06130 PF00474 Sodium:solute symporter family SPG_RS06135 PF00701 Dihydrodipicolinate synthetase family SPG_RS06140 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SPG_RS06145 PF01380 SIS domain SPG_RS06145 PF01418 Helix-turn-helix domain, rpiR family SPG_RS06170 PF00679 Elongation factor G C-terminus SPG_RS06170 PF14492 Elongation Factor G, domain II SPG_RS06170 PF03764 Elongation factor G, domain IV SPG_RS06170 PF00009 Elongation factor Tu GTP binding domain SPG_RS06180 PF00877 NlpC/P60 family SPG_RS06215 PF00398 Ribosomal RNA adenine dimethylase SPG_RS06220 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) SPG_RS06225 PF18106 Rolling Circle replication initiation protein N-terminal domain SPG_RS06225 PF02486 Replication initiation factor SPG_RS06240 PF06125 Bacterial protein of unknown function (DUF961) SPG_RS06275 PF00580 UvrD/REP helicase N-terminal domain SPG_RS06275 PF13361 UvrD-like helicase C-terminal domain SPG_RS06295 PF02899 Phage integrase, N-terminal SAM-like domain SPG_RS06295 PF00589 Phage integrase family SPG_RS06340 PF01381 Helix-turn-helix SPG_RS06345 PF03412 Peptidase C39 family SPG_RS06345 PF00664 ABC transporter transmembrane region SPG_RS06345 PF00005 ABC transporter SPG_RS06415 PF00005 ABC transporter SPG_RS06455 PF00145 C-5 cytosine-specific DNA methylase SPG_RS06460 PF06970 Replication initiator protein A (RepA) N-terminus SPG_RS06460 PF18008 Replication initiator protein A C-terminal domain SPG_RS06465 PF00542 Ribosomal protein L7/L12 C-terminal domain SPG_RS06465 PF16320 Ribosomal protein L7/L12 dimerisation domain SPG_RS06470 PF00466 Ribosomal protein L10 SPG_RS06475 PF01979 Amidohydrolase family SPG_RS06480 PF00005 ABC transporter SPG_RS06480 PF00664 ABC transporter transmembrane region SPG_RS06485 PF00664 ABC transporter transmembrane region SPG_RS06485 PF00005 ABC transporter SPG_RS06490 PF01625 Peptide methionine sulfoxide reductase SPG_RS06490 PF01641 SelR domain SPG_RS06500 PF00288 GHMP kinases N terminal domain SPG_RS06500 PF08544 GHMP kinases C terminal SPG_RS06505 PF00742 Homoserine dehydrogenase SPG_RS06505 PF03447 Homoserine dehydrogenase, NAD binding domain SPG_RS06510 PF05389 Negative regulator of genetic competence (MecA) SPG_RS06525 PF00535 Glycosyl transferase family 2 SPG_RS06530 PF00534 Glycosyl transferases group 1 SPG_RS06530 PF13439 Glycosyltransferase Family 4 SPG_RS06535 PF04991 LicD family SPG_RS06540 PF03816 Cell envelope-related transcriptional attenuator domain SPG_RS06545 PF00800 Prephenate dehydratase SPG_RS06550 PF01202 Shikimate kinase SPG_RS06555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPG_RS06560 PF06133 Control of competence regulator ComK, YlbF/YmcA SPG_RS06565 PF02153 Prephenate dehydrogenase SPG_RS06570 PF01264 Chorismate synthase SPG_RS06575 PF01761 3-dehydroquinate synthase SPG_RS06580 PF08501 Shikimate dehydrogenase substrate binding domain SPG_RS06580 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SPG_RS06585 PF01487 Type I 3-dehydroquinase SPG_RS06590 PF17785 PUA-like domain SPG_RS06590 PF10672 S-adenosylmethionine-dependent methyltransferase SPG_RS06600 PF00005 ABC transporter SPG_RS06605 PF09154 Domain of unknown function (DUF1939) SPG_RS06605 PF00128 Alpha amylase, catalytic domain SPG_RS06610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPG_RS06610 PF02272 DHHA1 domain SPG_RS06610 PF01411 tRNA synthetases class II (A) SPG_RS06625 PF13416 Bacterial extracellular solute-binding protein SPG_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS06640 PF08402 TOBE domain SPG_RS06640 PF00005 ABC transporter SPG_RS06645 PF01565 FAD binding domain SPG_RS06645 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SPG_RS06655 PF03306 Alpha-acetolactate decarboxylase SPG_RS06665 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS06670 PF01895 PhoU domain SPG_RS06675 PF00005 ABC transporter SPG_RS06680 PF00005 ABC transporter SPG_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS06690 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS06695 PF12849 PBP superfamily domain SPG_RS06700 PF01189 16S rRNA methyltransferase RsmB/F SPG_RS06700 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SPG_RS06700 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SPG_RS06705 PF00459 Inositol monophosphatase family SPG_RS06710 PF05256 Uncharacterised protein family (UPF0223) SPG_RS06715 PF03960 ArsC family SPG_RS06725 PF13344 Haloacid dehalogenase-like hydrolase SPG_RS06735 PF04055 Radical SAM superfamily SPG_RS06735 PF06969 HemN C-terminal domain SPG_RS06750 PF01790 Prolipoprotein diacylglyceryl transferase SPG_RS06755 PF02603 HPr Serine kinase N terminus SPG_RS06755 PF07475 HPr Serine kinase C-terminal domain SPG_RS06760 PF01165 Ribosomal protein S21 SPG_RS06765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SPG_RS06770 PF02547 Queuosine biosynthesis protein SPG_RS06785 PF13302 Acetyltransferase (GNAT) domain SPG_RS06790 PF02540 NAD synthase SPG_RS06795 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SPG_RS06795 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SPG_RS06795 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SPG_RS06805 PF01381 Helix-turn-helix SPG_RS06820 PF16325 Peptidase family U32 C-terminal domain SPG_RS06820 PF01136 Peptidase family U32 SPG_RS06830 PF01136 Peptidase family U32 SPG_RS06830 PF16325 Peptidase family U32 C-terminal domain SPG_RS06845 PF01555 DNA methylase SPG_RS06845 PF18755 Restriction Enzyme Adenine Methylase Associated SPG_RS06850 PF00117 Glutamine amidotransferase class-I SPG_RS06850 PF02540 NAD synthase SPG_RS06850 PF00958 GMP synthase C terminal domain SPG_RS06855 PF00392 Bacterial regulatory proteins, gntR family SPG_RS06855 PF07702 UTRA domain SPG_RS06860 PF00892 EamA-like transporter family SPG_RS06865 PF00144 Beta-lactamase SPG_RS06900 PF01327 Polypeptide deformylase SPG_RS06905 PF00588 SpoU rRNA Methylase family SPG_RS06905 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPG_RS06910 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPG_RS06920 PF00005 ABC transporter SPG_RS06925 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS06930 PF03960 ArsC family SPG_RS06935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SPG_RS06935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SPG_RS06950 PF03006 Haemolysin-III related SPG_RS06955 PF01174 SNO glutamine amidotransferase family SPG_RS06960 PF01680 SOR/SNZ family SPG_RS06970 PF02424 ApbE family SPG_RS06975 PF00890 FAD binding domain SPG_RS06975 PF04205 FMN-binding domain SPG_RS06975 PF03358 NADPH-dependent FMN reductase SPG_RS06980 PF03358 NADPH-dependent FMN reductase SPG_RS06980 PF04205 FMN-binding domain SPG_RS06980 PF00890 FAD binding domain SPG_RS06985 PF05979 Bacterial protein of unknown function (DUF896) SPG_RS06990 PF02092 Glycyl-tRNA synthetase beta subunit SPG_RS06995 PF02091 Glycyl-tRNA synthetase alpha subunit SPG_RS07005 PF00248 Aldo/keto reductase family SPG_RS07015 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SPG_RS07015 PF01522 Polysaccharide deacetylase SPG_RS07025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPG_RS07025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPG_RS07030 PF00271 Helicase conserved C-terminal domain SPG_RS07030 PF00270 DEAD/DEAH box helicase SPG_RS07040 PF13358 DDE superfamily endonuclease SPG_RS07050 PF03143 Elongation factor Tu C-terminal domain SPG_RS07050 PF03144 Elongation factor Tu domain 2 SPG_RS07050 PF00009 Elongation factor Tu GTP binding domain SPG_RS07055 PF00230 Major intrinsic protein SPG_RS07090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPG_RS07090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPG_RS07090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPG_RS07090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPG_RS07100 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPG_RS07105 PF00005 ABC transporter SPG_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS07120 PF01594 AI-2E family transporter SPG_RS07125 PF10282 Lactonase, 7-bladed beta-propeller SPG_RS07130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SPG_RS07130 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SPG_RS07135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPG_RS07135 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPG_RS07150 PF00213 ATP synthase delta (OSCP) subunit SPG_RS07155 PF00430 ATP synthase B/B' CF(0) SPG_RS07160 PF00119 ATP synthase A chain SPG_RS07165 PF00137 ATP synthase subunit C SPG_RS07170 PF13936 Helix-turn-helix domain SPG_RS07175 PF00583 Acetyltransferase (GNAT) family SPG_RS07180 PF03449 Transcription elongation factor, N-terminal SPG_RS07180 PF01272 Transcription elongation factor, GreA/GreB, C-term SPG_RS07185 PF02618 YceG-like family SPG_RS07200 PF08245 Mur ligase middle domain SPG_RS07200 PF02875 Mur ligase family, glutamate ligase domain SPG_RS07200 PF01225 Mur ligase family, catalytic domain SPG_RS07210 PF12419 SNF2 Helicase protein SPG_RS07210 PF00176 SNF2 family N-terminal domain SPG_RS07210 PF00271 Helicase conserved C-terminal domain SPG_RS07215 PF00155 Aminotransferase class I and II SPG_RS07220 PF01053 Cys/Met metabolism PLP-dependent enzyme SPG_RS07225 PF00664 ABC transporter transmembrane region SPG_RS07225 PF00005 ABC transporter SPG_RS07240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPG_RS07245 PF14667 Polysaccharide biosynthesis C-terminal domain SPG_RS07245 PF01943 Polysaccharide biosynthesis protein SPG_RS07250 PF08245 Mur ligase middle domain SPG_RS07250 PF02875 Mur ligase family, glutamate ligase domain SPG_RS07255 PF05532 CsbD-like SPG_RS07270 PF01368 DHH family SPG_RS07270 PF02833 DHHA2 domain SPG_RS07275 PF01541 GIY-YIG catalytic domain SPG_RS07280 PF05175 Methyltransferase small domain SPG_RS07285 PF00575 S1 RNA binding domain SPG_RS07290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPG_RS07295 PF01084 Ribosomal protein S18 SPG_RS07300 PF00436 Single-strand binding protein family SPG_RS07305 PF01250 Ribosomal protein S6 SPG_RS07310 PF01336 OB-fold nucleic acid binding domain SPG_RS07310 PF00152 tRNA synthetases class II (D, K and N) SPG_RS07320 PF00155 Aminotransferase class I and II SPG_RS07335 PF03358 NADPH-dependent FMN reductase SPG_RS07340 PF03883 Peroxide stress protein YaaA SPG_RS07355 PF01327 Polypeptide deformylase SPG_RS07360 PF02798 Glutathione S-transferase, N-terminal domain SPG_RS07365 PF00689 Cation transporting ATPase, C-terminus SPG_RS07365 PF00690 Cation transporter/ATPase, N-terminus SPG_RS07370 PF16916 Dimerisation domain of Zinc Transporter SPG_RS07370 PF01545 Cation efflux family SPG_RS07375 PF00005 ABC transporter SPG_RS07375 PF16326 ABC transporter C-terminal domain SPG_RS07375 PF12848 ABC transporter SPG_RS07380 PF01743 Poly A polymerase head domain SPG_RS07380 PF12627 Probable RNA and SrmB- binding site of polymerase A SPG_RS07380 PF13735 tRNA nucleotidyltransferase domain 2 putative SPG_RS07385 PF05173 Dihydrodipicolinate reductase, C-terminus SPG_RS07385 PF01113 Dihydrodipicolinate reductase, N-terminus SPG_RS07390 PF02645 Uncharacterised protein, DegV family COG1307 SPG_RS07400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPG_RS07400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPG_RS07400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPG_RS07400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPG_RS07410 PF02457 DisA bacterial checkpoint controller nucleotide-binding SPG_RS07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPG_RS07425 PF14527 WhiA LAGLIDADG-like domain SPG_RS07425 PF02650 WhiA C-terminal HTH domain SPG_RS07425 PF10298 WhiA N-terminal LAGLIDADG-like domain SPG_RS07430 PF01933 Uncharacterised protein family UPF0052 SPG_RS07435 PF03668 P-loop ATPase protein family SPG_RS07440 PF01042 Endoribonuclease L-PSP SPG_RS07445 PF01926 50S ribosome-binding GTPase SPG_RS07450 PF07724 AAA domain (Cdc48 subfamily) SPG_RS07450 PF10431 C-terminal, D2-small domain, of ClpB protein SPG_RS07450 PF06689 ClpX C4-type zinc finger SPG_RS07460 PF00186 Dihydrofolate reductase SPG_RS07465 PF00210 Ferritin-like domain SPG_RS07470 PF17890 Peptidoglycan hydrolase LytB WW-like domain SPG_RS07470 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain SPG_RS07470 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPG_RS07470 PF01473 Putative cell wall binding repeat SPG_RS07475 PF00121 Triosephosphate isomerase SPG_RS07480 PF07261 Replication initiation and membrane attachment SPG_RS07485 PF04204 Homoserine O-succinyltransferase SPG_RS07490 PF00156 Phosphoribosyl transferase domain SPG_RS07495 PF13649 Methyltransferase domain SPG_RS07505 PF00005 ABC transporter SPG_RS07505 PF03459 TOBE domain SPG_RS07505 PF17912 MalK OB fold domain SPG_RS07515 PF00857 Isochorismatase family SPG_RS07520 PF06018 CodY GAF-like domain SPG_RS07520 PF08222 CodY helix-turn-helix domain SPG_RS07525 PF00271 Helicase conserved C-terminal domain SPG_RS07525 PF00270 DEAD/DEAH box helicase SPG_RS07530 PF07690 Major Facilitator Superfamily SPG_RS07535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPG_RS07535 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPG_RS07540 PF08245 Mur ligase middle domain SPG_RS07540 PF08353 Domain of unknown function (DUF1727) SPG_RS07545 PF07685 CobB/CobQ-like glutamine amidotransferase domain SPG_RS07550 PF00557 Metallopeptidase family M24 SPG_RS07550 PF01321 Creatinase/Prolidase N-terminal domain SPG_RS07555 PF00665 Integrase core domain SPG_RS07555 PF13333 Integrase core domain SPG_RS07555 PF13276 HTH-like domain SPG_RS07570 PF07155 ECF-type riboflavin transporter, S component SPG_RS07575 PF08543 Phosphomethylpyrimidine kinase SPG_RS07580 PF01416 tRNA pseudouridine synthase SPG_RS07600 PF08274 PhnA Zinc-Ribbon SPG_RS07600 PF03831 PhnA domain SPG_RS07605 PF02224 Cytidylate kinase SPG_RS07620 PF00535 Glycosyl transferase family 2 SPG_RS07625 PF16363 GDP-mannose 4,6 dehydratase SPG_RS07635 PF01266 FAD dependent oxidoreductase SPG_RS07640 PF01784 NIF3 (NGG1p interacting factor 3) SPG_RS07645 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SPG_RS07655 PF01553 Acyltransferase SPG_RS07665 PF00312 Ribosomal protein S15 SPG_RS07670 PF13460 NAD(P)H-binding SPG_RS07685 PF03129 Anticodon binding domain SPG_RS07685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPG_RS07685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPG_RS07685 PF02824 TGS domain SPG_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS07695 PF00486 Transcriptional regulatory protein, C terminal SPG_RS07695 PF00072 Response regulator receiver domain SPG_RS07710 PF02082 Transcriptional regulator SPG_RS07740 PF02580 D-Tyr-tRNA(Tyr) deacylase SPG_RS07745 PF02824 TGS domain SPG_RS07745 PF04607 Region found in RelA / SpoT proteins SPG_RS07745 PF13291 ACT domain SPG_RS07755 PF00753 Metallo-beta-lactamase superfamily SPG_RS07760 PF05649 Peptidase family M13 SPG_RS07760 PF01431 Peptidase family M13 SPG_RS07765 PF00005 ABC transporter SPG_RS07770 PF00950 ABC 3 transport family SPG_RS07775 PF01297 Zinc-uptake complex component A periplasmic SPG_RS07780 PF08534 Redoxin SPG_RS07790 PF00005 ABC transporter SPG_RS07790 PF12704 MacB-like periplasmic core domain SPG_RS07790 PF02687 FtsX-like permease family SPG_RS07800 PF00300 Histidine phosphatase superfamily (branch 1) SPG_RS07820 PF06827 Zinc finger found in FPG and IleRS SPG_RS07820 PF08264 Anticodon-binding domain of tRNA SPG_RS07820 PF00133 tRNA synthetases class I (I, L, M and V) SPG_RS07835 PF05103 DivIVA protein SPG_RS07850 PF04472 Cell division protein SepF SPG_RS07855 PF01168 Alanine racemase, N-terminal domain SPG_RS07860 PF12327 FtsZ family, C-terminal domain SPG_RS07860 PF00091 Tubulin/FtsZ family, GTPase domain SPG_RS07865 PF02491 SHS2 domain inserted in FTSA SPG_RS07865 PF11983 Membrane-attachment and polymerisation-promoting switch SPG_RS07875 PF00293 NUDIX domain SPG_RS07880 PF08245 Mur ligase middle domain SPG_RS07880 PF02875 Mur ligase family, glutamate ligase domain SPG_RS07880 PF01225 Mur ligase family, catalytic domain SPG_RS07885 PF01820 D-ala D-ala ligase N-terminus SPG_RS07885 PF07478 D-ala D-ala ligase C-terminus SPG_RS07890 PF13662 Toprim domain SPG_RS07890 PF02132 RecR protein SPG_RS07895 PF03717 Penicillin-binding Protein dimerisation domain SPG_RS07895 PF00905 Penicillin binding protein transpeptidase domain SPG_RS07905 PF00480 ROK family SPG_RS07910 PF00701 Dihydrodipicolinate synthetase family SPG_RS07925 PF04074 YhcH/YjgK/YiaL SPG_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS07945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPG_RS07945 PF00367 phosphotransferase system, EIIB SPG_RS07945 PF02378 Phosphotransferase system, EIIC SPG_RS07950 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SPG_RS07955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPG_RS07955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPG_RS07960 PF02973 Sialidase, N-terminal domain SPG_RS07960 PF13088 BNR repeat-like domain SPG_RS07960 PF02012 BNR/Asp-box repeat SPG_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS07975 PF01547 Bacterial extracellular solute-binding protein SPG_RS07985 PF04650 YSIRK type signal peptide SPG_RS07985 PF13088 BNR repeat-like domain SPG_RS07985 PF02973 Sialidase, N-terminal domain SPG_RS07995 PF05448 Acetyl xylan esterase (AXE1) SPG_RS08000 PF00271 Helicase conserved C-terminal domain SPG_RS08000 PF00270 DEAD/DEAH box helicase SPG_RS08000 PF17191 RecG wedge domain SPG_RS08005 PF01168 Alanine racemase, N-terminal domain SPG_RS08005 PF00842 Alanine racemase, C-terminal domain SPG_RS08010 PF01648 4'-phosphopantetheinyl transferase superfamily SPG_RS08015 PF00793 DAHP synthetase I family SPG_RS08020 PF00793 DAHP synthetase I family SPG_RS08025 PF02810 SEC-C motif SPG_RS08025 PF07517 SecA DEAD-like domain SPG_RS08025 PF01043 SecA preprotein cross-linking domain SPG_RS08025 PF07516 SecA Wing and Scaffold domain SPG_RS08035 PF00005 ABC transporter SPG_RS08060 PF01926 50S ribosome-binding GTPase SPG_RS08060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SPG_RS08065 PF00881 Nitroreductase family SPG_RS08070 PF01695 IstB-like ATP binding protein SPG_RS08070 PF07319 Primosomal protein DnaI N-terminus SPG_RS08080 PF03477 ATP cone domain SPG_RS08085 PF00392 Bacterial regulatory proteins, gntR family SPG_RS08090 PF00005 ABC transporter SPG_RS08105 PF00005 ABC transporter SPG_RS08105 PF13732 Domain of unknown function (DUF4162) SPG_RS08125 PF00480 ROK family SPG_RS08130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPG_RS08130 PF02378 Phosphotransferase system, EIIC SPG_RS08130 PF00367 phosphotransferase system, EIIB SPG_RS08140 PF08244 Glycosyl hydrolases family 32 C terminal SPG_RS08140 PF00251 Glycosyl hydrolases family 32 N-terminal domain SPG_RS08145 PF00356 Bacterial regulatory proteins, lacI family SPG_RS08150 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SPG_RS08155 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SPG_RS08155 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SPG_RS08190 PF01189 16S rRNA methyltransferase RsmB/F SPG_RS08190 PF01029 NusB family SPG_RS08195 PF02911 Formyl transferase, C-terminal domain SPG_RS08195 PF00551 Formyl transferase SPG_RS08200 PF18074 Primosomal protein N C-terminal domain SPG_RS08200 PF04851 Type III restriction enzyme, res subunit SPG_RS08200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SPG_RS08200 PF17764 3′ DNA-binding domain (3′BD) SPG_RS08200 PF00271 Helicase conserved C-terminal domain SPG_RS08205 PF01192 RNA polymerase Rpb6 SPG_RS08210 PF00625 Guanylate kinase SPG_RS08215 PF12072 Domain of unknown function (DUF3552) SPG_RS08215 PF00013 KH domain SPG_RS08215 PF01966 HD domain SPG_RS08225 PF05636 HIGH Nucleotidyl Transferase SPG_RS08230 PF13649 Methyltransferase domain SPG_RS08245 PF01966 HD domain SPG_RS08250 PF01467 Cytidylyltransferase-like SPG_RS08255 PF01985 CRS1 / YhbY (CRM) domain SPG_RS08260 PF01926 50S ribosome-binding GTPase SPG_RS08275 PF00924 Mechanosensitive ion channel SPG_RS08300 PF00085 Thioredoxin SPG_RS08305 PF14489 QueF-like protein SPG_RS08305 PF06508 Queuosine biosynthesis protein QueC SPG_RS08315 PF00230 Major intrinsic protein SPG_RS08330 PF08439 Oligopeptidase F SPG_RS08330 PF01432 Peptidase family M3 SPG_RS08335 PF04452 RNA methyltransferase SPG_RS08345 PF00293 NUDIX domain SPG_RS08380 PF12002 MgsA AAA+ ATPase C terminal SPG_RS08380 PF05496 Holliday junction DNA helicase RuvB P-loop domain SPG_RS08380 PF16193 AAA C-terminal domain SPG_RS08390 PF00251 Glycosyl hydrolases family 32 N-terminal domain SPG_RS08390 PF08244 Glycosyl hydrolases family 32 C terminal SPG_RS08395 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08400 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08410 PF00356 Bacterial regulatory proteins, lacI family SPG_RS08415 PF05043 Mga helix-turn-helix domain SPG_RS08415 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SPG_RS08415 PF08270 M protein trans-acting positive regulator (MGA) PRD domain SPG_RS08435 PF03780 Asp23 family, cell envelope-related function SPG_RS08440 PF05532 CsbD-like SPG_RS08455 PF03781 Sulfatase-modifying factor enzyme 1 SPG_RS08465 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPG_RS08470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS08480 PF02378 Phosphotransferase system, EIIC SPG_RS08485 PF00480 ROK family SPG_RS08510 PF00290 Tryptophan synthase alpha chain SPG_RS08515 PF00291 Pyridoxal-phosphate dependent enzyme SPG_RS08520 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SPG_RS08525 PF00218 Indole-3-glycerol phosphate synthase SPG_RS08530 PF00591 Glycosyl transferase family, a/b domain SPG_RS08530 PF02885 Glycosyl transferase family, helical bundle domain SPG_RS08535 PF00117 Glutamine amidotransferase class-I SPG_RS08540 PF00425 chorismate binding enzyme SPG_RS08540 PF04715 Anthranilate synthase component I, N terminal region SPG_RS08555 PF00356 Bacterial regulatory proteins, lacI family SPG_RS08565 PF02308 MgtC family SPG_RS08570 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08575 PF00005 ABC transporter SPG_RS08575 PF08402 TOBE domain SPG_RS08595 PF12708 Pectate lyase superfamily protein SPG_RS08595 PF13229 Right handed beta helix region SPG_RS08595 PF04650 YSIRK type signal peptide SPG_RS08610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SPG_RS08615 PF02397 Bacterial sugar transferase SPG_RS08620 PF00664 ABC transporter transmembrane region SPG_RS08620 PF00005 ABC transporter SPG_RS08625 PF00005 ABC transporter SPG_RS08625 PF00664 ABC transporter transmembrane region SPG_RS08650 PF03372 Endonuclease/Exonuclease/phosphatase family SPG_RS08665 PF00156 Phosphoribosyl transferase domain SPG_RS08670 PF00860 Permease family SPG_RS08675 PF04556 DpnII restriction endonuclease SPG_RS08680 PF01555 DNA methylase SPG_RS08685 PF02086 D12 class N6 adenine-specific DNA methyltransferase SPG_RS08695 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SPG_RS08695 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SPG_RS08700 PF08544 GHMP kinases C terminal SPG_RS08700 PF10509 Galactokinase galactose-binding signature SPG_RS08700 PF00288 GHMP kinases N terminal domain SPG_RS08705 PF00356 Bacterial regulatory proteins, lacI family SPG_RS08715 PF13411 MerR HTH family regulatory protein SPG_RS08720 PF01545 Cation efflux family SPG_RS08730 PF04973 Nicotinamide mononucleotide transporter SPG_RS08735 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08740 PF00005 ABC transporter SPG_RS08740 PF00571 CBS domain SPG_RS08760 PF05343 M42 glutamyl aminopeptidase SPG_RS08765 PF01370 NAD dependent epimerase/dehydratase family SPG_RS08775 PF01032 FecCD transport family SPG_RS08780 PF01032 FecCD transport family SPG_RS08785 PF00005 ABC transporter SPG_RS08790 PF01497 Periplasmic binding protein SPG_RS08795 PF01809 Putative membrane protein insertion efficiency factor SPG_RS08800 PF01479 S4 domain SPG_RS08800 PF00849 RNA pseudouridylate synthase SPG_RS08805 PF04079 Segregation and condensation complex subunit ScpB SPG_RS08810 PF02616 Segregation and condensation protein ScpA SPG_RS08815 PF02899 Phage integrase, N-terminal SAM-like domain SPG_RS08815 PF00589 Phage integrase family SPG_RS08830 PF01725 Ham1 family SPG_RS08835 PF01177 Asp/Glu/Hydantoin racemase SPG_RS08840 PF03672 Uncharacterised protein family (UPF0154) SPG_RS08845 PF16657 Maltogenic Amylase, C-terminal domain SPG_RS08845 PF00128 Alpha amylase, catalytic domain SPG_RS08850 PF00367 phosphotransferase system, EIIB SPG_RS08850 PF02378 Phosphotransferase system, EIIC SPG_RS08855 PF07702 UTRA domain SPG_RS08855 PF00392 Bacterial regulatory proteins, gntR family SPG_RS08870 PF13683 Integrase core domain SPG_RS08870 PF01610 Transposase SPG_RS08875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPG_RS08875 PF00005 ABC transporter SPG_RS08880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPG_RS08880 PF00005 ABC transporter SPG_RS08885 PF12911 N-terminal TM domain of oligopeptide transport permease C SPG_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPG_RS08910 PF00128 Alpha amylase, catalytic domain SPG_RS08920 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08925 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS08930 PF01547 Bacterial extracellular solute-binding protein SPG_RS08935 PF16875 Glycosyl hydrolase family 36 N-terminal domain SPG_RS08935 PF16874 Glycosyl hydrolase family 36 C-terminal domain SPG_RS08940 PF12833 Helix-turn-helix domain SPG_RS08940 PF02311 AraC-like ligand binding domain SPG_RS08945 PF02237 Biotin protein ligase C terminal domain SPG_RS08945 PF03099 Biotin/lipoate A/B protein ligase family SPG_RS09060 PF01938 TRAM domain SPG_RS09060 PF05958 tRNA (Uracil-5-)-methyltransferase SPG_RS09065 PF02631 RecX family SPG_RS09070 PF04167 Protein of unknown function (DUF402) SPG_RS09085 PF01209 ubiE/COQ5 methyltransferase family SPG_RS09090 PF02677 Epoxyqueuosine reductase QueH SPG_RS09095 PF00118 TCP-1/cpn60 chaperonin family SPG_RS09100 PF00166 Chaperonin 10 Kd subunit SPG_RS09105 PF00436 Single-strand binding protein family SPG_RS09110 PF00106 short chain dehydrogenase SPG_RS09115 PF14794 Domain of unknown function (DUF4479) SPG_RS09115 PF01588 Putative tRNA binding domain SPG_RS09120 PF00085 Thioredoxin SPG_RS09155 PF00005 ABC transporter SPG_RS09155 PF00664 ABC transporter transmembrane region SPG_RS09175 PF01709 Transcriptional regulator SPG_RS09180 PF17440 Thiol-activated cytolysin beta sandwich domain SPG_RS09180 PF01289 Thiol-activated cytolysin SPG_RS09245 PF01510 N-acetylmuramoyl-L-alanine amidase SPG_RS09245 PF01473 Putative cell wall binding repeat SPG_RS09255 PF00154 recA bacterial DNA recombination protein SPG_RS09260 PF02464 Competence-damaged protein SPG_RS09260 PF00994 Probable molybdopterin binding domain SPG_RS09260 PF18146 Damage-inducible protein CinA KH domain SPG_RS09265 PF03816 Cell envelope-related transcriptional attenuator domain SPG_RS09275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SPG_RS09300 PF02687 FtsX-like permease family SPG_RS09300 PF12704 MacB-like periplasmic core domain SPG_RS09300 PF00005 ABC transporter SPG_RS09310 PF00334 Nucleoside diphosphate kinase SPG_RS09315 PF04998 RNA polymerase Rpb1, domain 5 SPG_RS09315 PF04983 RNA polymerase Rpb1, domain 3 SPG_RS09315 PF00623 RNA polymerase Rpb1, domain 2 SPG_RS09315 PF04997 RNA polymerase Rpb1, domain 1 SPG_RS09315 PF05000 RNA polymerase Rpb1, domain 4 SPG_RS09320 PF04560 RNA polymerase Rpb2, domain 7 SPG_RS09320 PF04561 RNA polymerase Rpb2, domain 2 SPG_RS09320 PF00562 RNA polymerase Rpb2, domain 6 SPG_RS09320 PF04565 RNA polymerase Rpb2, domain 3 SPG_RS09320 PF04563 RNA polymerase beta subunit SPG_RS09320 PF10385 RNA polymerase beta subunit external 1 domain SPG_RS09330 PF00571 CBS domain SPG_RS09330 PF03471 Transporter associated domain SPG_RS09330 PF01595 Cyclin M transmembrane N-terminal domain SPG_RS09335 PF01223 DNA/RNA non-specific endonuclease SPG_RS09340 PF11772 DNA-directed RNA polymerase subunit beta SPG_RS09345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPG_RS09355 PF13180 PDZ domain SPG_RS09355 PF05362 Lon protease (S16) C-terminal proteolytic domain SPG_RS09360 PF01467 Cytidylyltransferase-like SPG_RS09370 PF03590 Aspartate-ammonia ligase SPG_RS09375 PF01027 Inhibitor of apoptosis-promoting Bax1 SPG_RS09385 PF00708 Acylphosphatase SPG_RS09390 PF02096 60Kd inner membrane protein SPG_RS09395 PF04055 Radical SAM superfamily SPG_RS09400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SPG_RS09400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SPG_RS09405 PF09182 Bacterial purine repressor, N-terminal SPG_RS09405 PF00156 Phosphoribosyl transferase domain SPG_RS09410 PF01336 OB-fold nucleic acid binding domain SPG_RS09410 PF01966 HD domain SPG_RS09415 PF02646 RmuC family SPG_RS09420 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SPG_RS09420 PF04263 Thiamin pyrophosphokinase, catalytic domain SPG_RS09425 PF00834 Ribulose-phosphate 3 epimerase family SPG_RS09430 PF03193 RsgA GTPase SPG_RS09430 PF16745 RsgA N-terminal domain SPG_RS09435 PF00398 Ribosomal RNA adenine dimethylase SPG_RS09445 PF12704 MacB-like periplasmic core domain SPG_RS09445 PF02687 FtsX-like permease family SPG_RS09445 PF00005 ABC transporter SPG_RS09465 PF13331 Domain of unknown function (DUF4093) SPG_RS09465 PF13662 Toprim domain SPG_RS09470 PF01026 TatD related DNase SPG_RS09480 PF00468 Ribosomal protein L34 SPG_RS09485 PF00155 Aminotransferase class I and II SPG_RS09495 PF00582 Universal stress protein family SPG_RS09505 PF17763 Glutaminase/Asparaginase C-terminal domain SPG_RS09505 PF00710 Asparaginase, N-terminal SPG_RS09510 PF00356 Bacterial regulatory proteins, lacI family SPG_RS09515 PF00072 Response regulator receiver domain SPG_RS09515 PF00196 Bacterial regulatory proteins, luxR family SPG_RS09520 PF07730 Histidine kinase SPG_RS09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS09530 PF00005 ABC transporter SPG_RS09620 PF02357 Transcription termination factor nusG SPG_RS09620 PF00467 KOW motif SPG_RS09630 PF00471 Ribosomal protein L33 SPG_RS09635 PF00912 Transglycosylase SPG_RS09635 PF00905 Penicillin binding protein transpeptidase domain SPG_RS09640 PF00849 RNA pseudouridylate synthase SPG_RS09645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SPG_RS09645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPG_RS09650 PF12704 MacB-like periplasmic core domain SPG_RS09650 PF02687 FtsX-like permease family SPG_RS09665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SPG_RS09665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SPG_RS09675 PF00005 ABC transporter SPG_RS09680 PF00392 Bacterial regulatory proteins, gntR family SPG_RS09680 PF07702 UTRA domain SPG_RS09685 PF00232 Glycosyl hydrolase family 1 SPG_RS09690 PF02378 Phosphotransferase system, EIIC SPG_RS09695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS09700 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPG_RS09705 PF00465 Iron-containing alcohol dehydrogenase SPG_RS09705 PF00171 Aldehyde dehydrogenase family SPG_RS09715 PF01451 Low molecular weight phosphotyrosine protein phosphatase SPG_RS09725 PF02779 Transketolase, pyrimidine binding domain SPG_RS09725 PF00456 Transketolase, thiamine diphosphate binding domain SPG_RS09725 PF02780 Transketolase, C-terminal domain SPG_RS09745 PF01261 Xylose isomerase-like TIM barrel SPG_RS09750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPG_RS09755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPG_RS09760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPG_RS09765 PF03611 PTS system sugar-specific permease component SPG_RS09775 PF01424 R3H domain SPG_RS09775 PF14804 Jag N-terminus SPG_RS09780 PF02096 60Kd inner membrane protein SPG_RS09785 PF00825 Ribonuclease P SPG_RS09790 PF00871 Acetokinase family SPG_RS09830 PF07963 Prokaryotic N-terminal methylation motif SPG_RS09835 PF00482 Type II secretion system (T2SS), protein F SPG_RS09840 PF00437 Type II/IV secretion system protein SPG_RS09850 PF13823 Alcohol dehydrogenase GroES-associated SPG_RS09850 PF00107 Zinc-binding dehydrogenase SPG_RS09850 PF08240 Alcohol dehydrogenase GroES-like domain SPG_RS09855 PF01979 Amidohydrolase family SPG_RS09860 PF01757 Acyltransferase family SPG_RS09865 PF01702 Queuine tRNA-ribosyltransferase SPG_RS09875 PF01470 Pyroglutamyl peptidase SPG_RS09880 PF06993 Protein of unknown function (DUF1304) SPG_RS09895 PF00475 Imidazoleglycerol-phosphate dehydratase SPG_RS09895 PF08645 Polynucleotide kinase 3 phosphatase SPG_RS09900 PF01554 MatE SPG_RS09905 PF14821 Threonine synthase N terminus SPG_RS09905 PF00291 Pyridoxal-phosphate dependent enzyme SPG_RS09935 PF14659 Phage integrase, N-terminal SAM-like domain SPG_RS09935 PF00589 Phage integrase family SPG_RS09940 PF04607 Region found in RelA / SpoT proteins SPG_RS09940 PF13291 ACT domain SPG_RS09940 PF02824 TGS domain SPG_RS09950 PF00149 Calcineurin-like phosphoesterase SPG_RS10035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPG_RS10040 PF00749 tRNA synthetases class I (E and Q), catalytic domain SPG_RS10045 PF00342 Phosphoglucose isomerase SPG_RS10055 PF07722 Peptidase C26 SPG_RS10060 PF00005 ABC transporter SPG_RS10060 PF00664 ABC transporter transmembrane region SPG_RS10070 PF00005 ABC transporter SPG_RS10070 PF00664 ABC transporter transmembrane region SPG_RS10075 PF00488 MutS domain V SPG_RS10075 PF05190 MutS family domain IV SPG_RS10075 PF05192 MutS domain III SPG_RS10075 PF05188 MutS domain II SPG_RS10075 PF01624 MutS domain I SPG_RS10080 PF02863 Arginine repressor, C-terminal domain SPG_RS10080 PF01316 Arginine repressor, DNA binding domain SPG_RS10085 PF03485 Arginyl tRNA synthetase N terminal domain SPG_RS10085 PF00750 tRNA synthetases class I (R) SPG_RS10085 PF05746 DALR anticodon binding domain SPG_RS10100 PF00072 Response regulator receiver domain SPG_RS10100 PF00486 Transcriptional regulatory protein, C terminal SPG_RS10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS10105 PF00512 His Kinase A (phospho-acceptor) domain SPG_RS10105 PF00989 PAS fold SPG_RS10105 PF16736 Single Cache-like SPG_RS10110 PF12849 PBP superfamily domain SPG_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10120 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10125 PF00005 ABC transporter SPG_RS10130 PF01895 PhoU domain SPG_RS10145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SPG_RS10145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SPG_RS10150 PF00483 Nucleotidyl transferase SPG_RS10160 PF01812 5-formyltetrahydrofolate cyclo-ligase family SPG_RS10165 PF07687 Peptidase dimerisation domain SPG_RS10165 PF01546 Peptidase family M20/M25/M40 SPG_RS10170 PF00132 Bacterial transferase hexapeptide (six repeats) SPG_RS10170 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SPG_RS10170 PF14602 Hexapeptide repeat of succinyl-transferase SPG_RS10175 PF00892 EamA-like transporter family SPG_RS10180 PF00912 Transglycosylase SPG_RS10180 PF00905 Penicillin binding protein transpeptidase domain SPG_RS10185 PF01479 S4 domain SPG_RS10185 PF00579 tRNA synthetases class I (W and Y) SPG_RS10190 PF00403 Heavy-metal-associated domain SPG_RS10200 PF13847 Methyltransferase domain SPG_RS10220 PF00343 Carbohydrate phosphorylase SPG_RS10225 PF02446 4-alpha-glucanotransferase SPG_RS10230 PF13416 Bacterial extracellular solute-binding protein SPG_RS10235 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10240 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SPG_RS10250 PF00356 Bacterial regulatory proteins, lacI family SPG_RS10260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPG_RS10260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPG_RS10265 PF01336 OB-fold nucleic acid binding domain SPG_RS10265 PF02938 GAD domain SPG_RS10265 PF00152 tRNA synthetases class II (D, K and N) SPG_RS10295 PF01381 Helix-turn-helix SPG_RS10310 PF13393 Histidyl-tRNA synthetase SPG_RS10310 PF03129 Anticodon binding domain SPG_RS10325 PF01883 Iron-sulfur cluster assembly protein SPG_RS10335 PF00920 Dehydratase family SPG_RS10340 PF02780 Transketolase, C-terminal domain SPG_RS10340 PF02779 Transketolase, pyrimidine binding domain SPG_RS10340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SPG_RS10345 PF00456 Transketolase, thiamine diphosphate binding domain SPG_RS10350 PF03611 PTS system sugar-specific permease component SPG_RS10375 PF01783 Ribosomal L32p protein family SPG_RS10380 PF00471 Ribosomal protein L33 SPG_RS10420 PF00480 ROK family SPG_RS10425 PF01074 Glycosyl hydrolases family 38 N-terminal domain SPG_RS10425 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SPG_RS10425 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SPG_RS10425 PF09261 Alpha mannosidase middle domain SPG_RS10425 PF07748 Glycosyl hydrolases family 38 C-terminal domain SPG_RS10435 PF07971 Glycosyl hydrolase family 92 SPG_RS10435 PF17678 Glycosyl hydrolase family 92 N-terminal domain SPG_RS10450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPG_RS10450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPG_RS10455 PF00696 Amino acid kinase family SPG_RS10460 PF03606 C4-dicarboxylate anaerobic carrier SPG_RS10465 PF01546 Peptidase family M20/M25/M40 SPG_RS10470 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SPG_RS10470 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SPG_RS10470 PF04650 YSIRK type signal peptide SPG_RS10470 PF07581 The GLUG motif SPG_RS10470 PF07501 G5 domain SPG_RS10470 PF00746 LPXTG cell wall anchor motif SPG_RS10475 PF07501 G5 domain SPG_RS10475 PF00728 Glycosyl hydrolase family 20, catalytic domain SPG_RS10475 PF00746 LPXTG cell wall anchor motif SPG_RS10475 PF04650 YSIRK type signal peptide SPG_RS10485 PF00465 Iron-containing alcohol dehydrogenase SPG_RS10495 PF00596 Class II Aldolase and Adducin N-terminal domain SPG_RS10505 PF16874 Glycosyl hydrolase family 36 C-terminal domain SPG_RS10505 PF16875 Glycosyl hydrolase family 36 N-terminal domain SPG_RS10520 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10525 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10530 PF13416 Bacterial extracellular solute-binding protein SPG_RS10535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SPG_RS10535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SPG_RS10540 PF00455 DeoR C terminal sensor domain SPG_RS10540 PF08220 DeoR-like helix-turn-helix domain SPG_RS10545 PF01297 Zinc-uptake complex component A periplasmic SPG_RS10545 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SPG_RS10550 PF00950 ABC 3 transport family SPG_RS10555 PF00005 ABC transporter SPG_RS10560 PF01047 MarR family SPG_RS10565 PF04914 DltD protein SPG_RS10570 PF00550 Phosphopantetheine attachment site SPG_RS10575 PF03062 MBOAT, membrane-bound O-acyltransferase family SPG_RS10580 PF13193 AMP-binding enzyme C-terminal domain SPG_RS10580 PF00501 AMP-binding enzyme SPG_RS10590 PF07690 Major Facilitator Superfamily SPG_RS10595 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SPG_RS10610 PF00230 Major intrinsic protein SPG_RS10615 PF01266 FAD dependent oxidoreductase SPG_RS10615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SPG_RS10620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SPG_RS10620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SPG_RS10630 PF01430 Hsp33 protein SPG_RS10635 PF01207 Dihydrouridine synthase (Dus) SPG_RS10645 PF00665 Integrase core domain SPG_RS10645 PF13333 Integrase core domain SPG_RS10655 PF13683 Integrase core domain SPG_RS10655 PF01610 Transposase SPG_RS10660 PF04650 YSIRK type signal peptide SPG_RS10660 PF05062 RICH domain SPG_RS10660 PF00746 LPXTG cell wall anchor motif SPG_RS10660 PF16828 GAG-binding domain on surface antigen SPG_RS10660 PF04650 YSIRK type signal peptide SPG_RS10660 PF00746 LPXTG cell wall anchor motif SPG_RS10660 PF16828 GAG-binding domain on surface antigen SPG_RS10660 PF05062 RICH domain SPG_RS10665 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SPG_RS10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPG_RS10670 PF00512 His Kinase A (phospho-acceptor) domain SPG_RS10670 PF00672 HAMP domain SPG_RS10675 PF00072 Response regulator receiver domain SPG_RS10675 PF00486 Transcriptional regulatory protein, C terminal SPG_RS10685 PF00004 ATPase family associated with various cellular activities (AAA) SPG_RS10685 PF07724 AAA domain (Cdc48 subfamily) SPG_RS10685 PF17871 AAA lid domain SPG_RS10685 PF02861 Clp amino terminal domain, pathogenicity island component SPG_RS10685 PF10431 C-terminal, D2-small domain, of ClpB protein SPG_RS10690 PF17727 CtsR C-terminal dimerization domain SPG_RS10690 PF05848 CtsR N-terminal HTH domain SPG_RS10695 PF00005 ABC transporter SPG_RS10700 PF09084 NMT1/THI5 like SPG_RS10705 PF00528 Binding-protein-dependent transport system inner membrane component SPG_RS10725 PF03796 DnaB-like helicase C terminal domain SPG_RS10725 PF00772 DnaB-like helicase N terminal domain SPG_RS10730 PF03948 Ribosomal protein L9, C-terminal domain SPG_RS10730 PF01281 Ribosomal protein L9, N-terminal domain SPG_RS10735 PF01368 DHH family SPG_RS10735 PF02272 DHHA1 domain SPG_RS10740 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SPG_RS10740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SPG_RS10750 PF00271 Helicase conserved C-terminal domain SPG_RS10750 PF04851 Type III restriction enzyme, res subunit SPG_RS10755 PF09186 Domain of unknown function (DUF1949) SPG_RS10755 PF01205 Uncharacterized protein family UPF0029 SPG_RS10760 PF00291 Pyridoxal-phosphate dependent enzyme SPG_RS10770 PF13358 DDE superfamily endonuclease SPG_RS10780 PF00889 Elongation factor TS SPG_RS10785 PF00318 Ribosomal protein S2 SPG_RS10790 PF05257 CHAP domain SPG_RS10790 PF01476 LysM domain SPG_RS10800 PF04085 rod shape-determining protein MreC SPG_RS10805 PF02361 Cobalt transport protein SPG_RS10810 PF00005 ABC transporter SPG_RS10815 PF00005 ABC transporter SPG_RS10820 PF01066 CDP-alcohol phosphatidyltransferase SPG_RS10830 PF00675 Insulinase (Peptidase family M16) SPG_RS10830 PF05193 Peptidase M16 inactive domain SPG_RS10835 PF00675 Insulinase (Peptidase family M16) SPG_RS10835 PF05193 Peptidase M16 inactive domain SPG_RS10845 PF02463 RecF/RecN/SMC N terminal domain SPG_RS10850 PF00571 CBS domain SPG_RS10850 PF00478 IMP dehydrogenase / GMP reductase domain SPG_RS10855 PF00579 tRNA synthetases class I (W and Y) SPG_RS10860 PF12848 ABC transporter SPG_RS10860 PF00005 ABC transporter SPG_RS10910 PF03047 COMC family SPG_RS10920 PF02590 Predicted SPOUT methyltransferase SPG_RS10925 PF13180 PDZ domain SPG_RS10930 PF17762 HTH domain found in ParB protein SPG_RS10930 PF02195 ParB-like nuclease domain SPG_RS10960 PF14659 Phage integrase, N-terminal SAM-like domain SPG_RS10960 PF00589 Phage integrase family