SPJ_RS00005	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SPJ_RS00010	SM00480	DNA polymerase III beta subunit
SPJ_RS00030	SM00487	DEAD-like helicases superfamily
SPJ_RS00030	SM00490	helicase superfamily c-terminal domain
SPJ_RS00030	SM00982	SPJ_RS00030
SPJ_RS00030	SM01058	CarD-like/TRCF domain
SPJ_RS00035	SM00363	S4 RNA-binding domain
SPJ_RS00055	SM00977	TilS substrate C-terminal domain
SPJ_RS00065	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00140	SM00788	Adenylosuccinate synthetase
SPJ_RS00180	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS00210	SM00855	Phosphoglycerate mutase family
SPJ_RS00215	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00220	SM00947	Carbonic anhydrase
SPJ_RS00235	SM01400	SPJ_RS00235
SPJ_RS00255	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SPJ_RS00255	SM00474	3'-5' exonuclease
SPJ_RS00255	SM00475	5'-3' exonuclease
SPJ_RS00255	SM00482	DNA polymerase A domain
SPJ_RS00260	SM00881	CoA binding domain
SPJ_RS00310	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS00330	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00345	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00365	SM01211	SPJ_RS00365
SPJ_RS00390	SM00798	AICARFT/IMPCHase bienzyme
SPJ_RS00390	SM00851	MGS-like domain
SPJ_RS00395	SM01209	SPJ_RS00395
SPJ_RS00395	SM01210	SPJ_RS00395
SPJ_RS00400	SM01001	AIR carboxylase
SPJ_RS00415	SM00998	Adenylosuccinate lyase C-terminus
SPJ_RS00420	SM01208	SPJ_RS00420
SPJ_RS00425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPJ_RS00425	SM00866	SPJ_RS00425
SPJ_RS00480	SM00450	Rhodanese Homology Domain
SPJ_RS00535	SM00448	cheY-homologous receiver domain
SPJ_RS00535	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS00540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPJ_RS00540	SM00387	Histidine kinase-like ATPases
SPJ_RS00540	SM00388	His Kinase A (phosphoacceptor) domain
SPJ_RS00545	SM00363	S4 RNA-binding domain
SPJ_RS00545	SM01390	SPJ_RS00545
SPJ_RS00580	SM00450	Rhodanese Homology Domain
SPJ_RS00645	SM00257	Lysin motif
SPJ_RS00665	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00670	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS00670	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SPJ_RS00685	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS00690	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00755	SM01228	SPJ_RS00755
SPJ_RS00765	SM00849	Metallo-beta-lactamase superfamily
SPJ_RS00835	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00855	SM00984	UDP binding domain
SPJ_RS00860	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS00890	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS00905	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS00905	SM00930	SPJ_RS00905
SPJ_RS00930	SM00342	helix_turn_helix, arabinose operon control protein
SPJ_RS00930	SM00448	cheY-homologous receiver domain
SPJ_RS00955	SM00850	LytTr DNA-binding domain
SPJ_RS00960	SM00853	MutL C terminal dimerisation domain
SPJ_RS00960	SM01340	SPJ_RS00960
SPJ_RS00985	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SPJ_RS01015	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS01040	SM00732	Likely ribonuclease with RNase H fold.
SPJ_RS01060	SM00155	Phospholipase D. Active site motifs.
SPJ_RS01100	SM01403	SPJ_RS01100
SPJ_RS01120	SM01382	SPJ_RS01120
SPJ_RS01120	SM01383	SPJ_RS01120
SPJ_RS01135	SM00322	K homology RNA-binding domain
SPJ_RS01155	SM01374	SPJ_RS01155
SPJ_RS01160	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SPJ_RS01215	SM00316	Ribosomal protein S1-like RNA-binding domain
SPJ_RS01235	SM00662	RNA polymerases D
SPJ_RS01255	SM00855	Phosphoglycerate mutase family
SPJ_RS01285	SM00342	helix_turn_helix, arabinose operon control protein
SPJ_RS01295	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPJ_RS01295	SM01134	SPJ_RS01295
SPJ_RS01355	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS01400	SM00642	Alpha-amylase domain
SPJ_RS01415	SM00838	Elongation factor G C-terminus
SPJ_RS01415	SM00889	Elongation factor G, domain IV
SPJ_RS01420	SM00479	SPJ_RS01420
SPJ_RS01420	SM00481	DNA polymerase alpha chain like domain
SPJ_RS01450	SM00363	S4 RNA-binding domain
SPJ_RS01480	SM00829	Enoylreductase
SPJ_RS01515	SM00905	Dihydroneopterin aldolase
SPJ_RS01565	SM01321	SPJ_RS01565
SPJ_RS01615	SM01323	SPJ_RS01615
SPJ_RS01625	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS01640	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS01655	SM00740	SPJ_RS01655
SPJ_RS01665	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS01665	SM01086	C-terminal, D2-small domain, of ClpB protein
SPJ_RS01680	SM00642	Alpha-amylase domain
SPJ_RS01820	SM00981	SPJ_RS01820
SPJ_RS01830	SM01350	SPJ_RS01830
SPJ_RS01835	SM00448	cheY-homologous receiver domain
SPJ_RS01835	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS01885	SM00387	Histidine kinase-like ATPases
SPJ_RS01890	SM00421	helix_turn_helix, Lux Regulon
SPJ_RS01890	SM00448	cheY-homologous receiver domain
SPJ_RS02005	SM00463	Small MutS-related domain
SPJ_RS02005	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SPJ_RS02005	SM00534	ATPase domain of DNA mismatch repair MUTS family
SPJ_RS02045	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPJ_RS02065	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SPJ_RS02070	SM00822	SPJ_RS02070
SPJ_RS02075	SM00825	Beta-ketoacyl synthase
SPJ_RS02090	SM00878	Biotin carboxylase C-terminal domain
SPJ_RS02120	SM00841	Elongation factor P, C-terminal
SPJ_RS02120	SM01185	SPJ_RS02120
SPJ_RS02125	SM00845	GatB domain
SPJ_RS02160	SM01120	SPJ_RS02160
SPJ_RS02160	SM01121	SPJ_RS02160
SPJ_RS02200	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS02205	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS02300	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS02320	SM00014	Acid phosphatase homologues
SPJ_RS02355	SM01208	SPJ_RS02355
SPJ_RS02370	SM00422	helix_turn_helix, mercury resistance
SPJ_RS02375	SM01230	SPJ_RS02375
SPJ_RS02410	SM00487	DEAD-like helicases superfamily
SPJ_RS02445	SM00271	DnaJ molecular chaperone homology domain
SPJ_RS02465	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS02480	SM00850	LytTr DNA-binding domain
SPJ_RS02485	SM00448	cheY-homologous receiver domain
SPJ_RS02485	SM00850	LytTr DNA-binding domain
SPJ_RS02505	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS02585	SM00322	K homology RNA-binding domain
SPJ_RS02675	SM00487	DEAD-like helicases superfamily
SPJ_RS02695	SM00873	B3/4 domain
SPJ_RS02695	SM00874	tRNA synthetase B5 domain
SPJ_RS02695	SM00896	Ferredoxin-fold anticodon binding domain
SPJ_RS02710	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS02725	SM00316	Ribosomal protein S1-like RNA-binding domain
SPJ_RS02725	SM00322	K homology RNA-binding domain
SPJ_RS02740	SM00840	SPJ_RS02740
SPJ_RS02775	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS02785	SM00448	cheY-homologous receiver domain
SPJ_RS02785	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS02790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPJ_RS02790	SM00387	Histidine kinase-like ATPases
SPJ_RS02790	SM00388	His Kinase A (phosphoacceptor) domain
SPJ_RS02815	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS02820	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS02830	SM00849	Metallo-beta-lactamase superfamily
SPJ_RS02855	SM00465	GIY-YIG type nucleases (URI domain)
SPJ_RS02865	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS02880	SM00986	Uracil DNA glycosylase superfamily
SPJ_RS02880	SM00987	UreE urease accessory protein, C-terminal domain 
SPJ_RS02910	SM00649	Ribosomal protein L11/L12
SPJ_RS02945	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03000	SM01208	SPJ_RS03000
SPJ_RS03065	SM00342	helix_turn_helix, arabinose operon control protein
SPJ_RS03065	SM00448	cheY-homologous receiver domain
SPJ_RS03070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SPJ_RS03070	SM00387	Histidine kinase-like ATPases
SPJ_RS03150	SM00450	Rhodanese Homology Domain
SPJ_RS03165	SM00838	Elongation factor G C-terminus
SPJ_RS03185	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03205	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SPJ_RS03235	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03240	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS03250	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03300	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03450	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03455	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03460	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPJ_RS03465	SM00937	SPJ_RS03465
SPJ_RS03470	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03490	SM00487	DEAD-like helicases superfamily
SPJ_RS03490	SM00490	helicase superfamily c-terminal domain
SPJ_RS03530	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03610	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03630	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03690	SM01022	SPJ_RS03690
SPJ_RS03705	SM00448	cheY-homologous receiver domain
SPJ_RS03705	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS03710	SM00387	Histidine kinase-like ATPases
SPJ_RS03710	SM00388	His Kinase A (phosphoacceptor) domain
SPJ_RS03725	SM00479	SPJ_RS03725
SPJ_RS03725	SM00487	DEAD-like helicases superfamily
SPJ_RS03725	SM00491	SPJ_RS03725
SPJ_RS03745	SM00387	Histidine kinase-like ATPases
SPJ_RS03745	SM00433	TopoisomeraseII
SPJ_RS03780	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03780	SM01086	C-terminal, D2-small domain, of ClpB protein
SPJ_RS03795	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03880	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SPJ_RS03885	SM01133	SPJ_RS03885
SPJ_RS03900	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS03930	SM01207	SPJ_RS03930
SPJ_RS03935	SM00387	Histidine kinase-like ATPases
SPJ_RS03935	SM00433	TopoisomeraseII
SPJ_RS03945	SM00434	DNA Topoisomerase IV
SPJ_RS03990	SM00316	Ribosomal protein S1-like RNA-binding domain
SPJ_RS04015	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS04025	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS04055	SM00936	Penicillin-binding protein 5, C-terminal domain 
SPJ_RS04070	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPJ_RS04070	SM01134	SPJ_RS04070
SPJ_RS04085	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS04085	SM00843	SPJ_RS04085
SPJ_RS04100	SM00981	SPJ_RS04100
SPJ_RS04155	SM00487	DEAD-like helicases superfamily
SPJ_RS04165	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SPJ_RS04165	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
SPJ_RS04170	SM00481	DNA polymerase alpha chain like domain
SPJ_RS04235	SM00316	Ribosomal protein S1-like RNA-binding domain
SPJ_RS04235	SM00732	Likely ribonuclease with RNase H fold.
SPJ_RS04240	SM00731	SprT homologues.
SPJ_RS04260	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS04350	SM00363	S4 RNA-binding domain
SPJ_RS04355	SM00849	Metallo-beta-lactamase superfamily
SPJ_RS04360	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SPJ_RS04465	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SPJ_RS04470	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SPJ_RS04480	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SPJ_RS04495	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS04535	SM00047	Lysozyme subfamily 2
SPJ_RS04560	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SPJ_RS04560	SM01232	SPJ_RS04560
SPJ_RS04585	SM00316	Ribosomal protein S1-like RNA-binding domain
SPJ_RS04585	SM00955	SPJ_RS04585
SPJ_RS04630	SM00855	Phosphoglycerate mutase family
SPJ_RS04675	SM00479	SPJ_RS04675
SPJ_RS04775	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SPJ_RS04780	SM01130	SPJ_RS04780
SPJ_RS04800	SM00937	SPJ_RS04800
SPJ_RS04870	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS04890	SM00857	Resolvase, N terminal domain
SPJ_RS04920	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SPJ_RS04925	SM00642	Alpha-amylase domain
SPJ_RS04940	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS05005	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05020	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS05045	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05050	SM00400	zinc finger
SPJ_RS05050	SM00493	SPJ_RS05050
SPJ_RS05105	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPJ_RS05145	SM00881	CoA binding domain
SPJ_RS05165	SM01400	SPJ_RS05165
SPJ_RS05170	SM01118	SPJ_RS05170
SPJ_RS05175	SM00954	Region found in RelA / SpoT proteins
SPJ_RS05240	SM00904	Riboflavin kinase
SPJ_RS05255	SM00411	bacterial (prokaryotic) histone like domain
SPJ_RS05260	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05275	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SPJ_RS05275	SM00292	breast cancer carboxy-terminal domain
SPJ_RS05275	SM00532	Ligase N family
SPJ_RS05280	SM00642	Alpha-amylase domain
SPJ_RS05295	SM00642	Alpha-amylase domain
SPJ_RS05335	SM01192	SPJ_RS05335
SPJ_RS05335	SM01193	SPJ_RS05335
SPJ_RS05365	SM01208	SPJ_RS05365
SPJ_RS05370	SM01208	SPJ_RS05370
SPJ_RS05410	SM00861	Transketolase, pyrimidine binding domain
SPJ_RS05440	SM00986	Uracil DNA glycosylase superfamily
SPJ_RS05440	SM00987	UreE urease accessory protein, C-terminal domain 
SPJ_RS05490	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPJ_RS05490	SM01134	SPJ_RS05490
SPJ_RS05510	SM01061	CAT RNA binding domain
SPJ_RS05515	SM01133	SPJ_RS05515
SPJ_RS05565	SM00838	Elongation factor G C-terminus
SPJ_RS05585	SM00363	S4 RNA-binding domain
SPJ_RS05645	SM00434	DNA Topoisomerase IV
SPJ_RS05670	SM00849	Metallo-beta-lactamase superfamily
SPJ_RS05675	SM00091	PAS domain
SPJ_RS05675	SM00387	Histidine kinase-like ATPases
SPJ_RS05675	SM00388	His Kinase A (phosphoacceptor) domain
SPJ_RS05680	SM00448	cheY-homologous receiver domain
SPJ_RS05680	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS05685	SM00478	endonuclease III
SPJ_RS05735	SM00487	DEAD-like helicases superfamily
SPJ_RS05735	SM00490	helicase superfamily c-terminal domain
SPJ_RS05745	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS05745	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SPJ_RS05750	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05760	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05760	SM00962	SRP54-type protein, GTPase domain
SPJ_RS05760	SM00963	SRP54-type protein, helical bundle domain
SPJ_RS05775	SM00968	SMC proteins Flexible Hinge Domain
SPJ_RS05780	SM00358	Double-stranded RNA binding motif
SPJ_RS05780	SM00535	Ribonuclease III family
SPJ_RS05790	SM01240	SPJ_RS05790
SPJ_RS05800	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05825	SM01329	SPJ_RS05825
SPJ_RS05830	SM00917	LeuA allosteric (dimerisation) domain
SPJ_RS05855	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SPJ_RS05855	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SPJ_RS05855	SM00493	SPJ_RS05855
SPJ_RS05910	SM00851	MGS-like domain
SPJ_RS05910	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SPJ_RS05910	SM01209	SPJ_RS05910
SPJ_RS05915	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SPJ_RS05930	SM00478	endonuclease III
SPJ_RS05950	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05975	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS05975	SM00962	SRP54-type protein, GTPase domain
SPJ_RS05975	SM00963	SRP54-type protein, helical bundle domain
SPJ_RS05990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPJ_RS06000	SM00513	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
SPJ_RS06025	SM00830	Chorismate mutase type II
SPJ_RS06065	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SPJ_RS06190	SM01130	SPJ_RS06190
SPJ_RS06240	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06245	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06360	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06365	SM00642	Alpha-amylase domain
SPJ_RS06370	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SPJ_RS06400	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPJ_RS06435	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06440	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06495	SM00729	Elongator protein 3, MiaB family, Radical SAM
SPJ_RS06565	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS06610	SM00342	helix_turn_helix, arabinose operon control protein
SPJ_RS06615	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06620	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06635	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPJ_RS06675	SM00866	SPJ_RS06675
SPJ_RS06710	SM00854	Bacterial capsule synthesis protein PGA_cap
SPJ_RS06725	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SPJ_RS06740	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06845	SM00487	DEAD-like helicases superfamily
SPJ_RS06845	SM00490	helicase superfamily c-terminal domain
SPJ_RS06940	SM00062	Bacterial periplasmic substrate-binding proteins
SPJ_RS06945	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS06955	SM00028	Tetratricopeptide repeats
SPJ_RS06985	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07080	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07125	SM01131	SPJ_RS07125
SPJ_RS07140	SM00316	Ribosomal protein S1-like RNA-binding domain
SPJ_RS07195	SM01208	SPJ_RS07195
SPJ_RS07230	SM00831	Cation transporter/ATPase, N-terminus
SPJ_RS07240	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07315	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07315	SM00994	ClpX C4-type zinc finger
SPJ_RS07315	SM01086	C-terminal, D2-small domain, of ClpB protein
SPJ_RS07370	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07390	SM00487	DEAD-like helicases superfamily
SPJ_RS07390	SM00490	helicase superfamily c-terminal domain
SPJ_RS07515	SM00563	Phosphate acyltransferases
SPJ_RS07525	SM01387	SPJ_RS07525
SPJ_RS07545	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SPJ_RS07550	SM00387	Histidine kinase-like ATPases
SPJ_RS07555	SM00448	cheY-homologous receiver domain
SPJ_RS07555	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS07580	SM00529	Helix-turn-helix diphteria tox regulatory element
SPJ_RS07580	SM00899	SPJ_RS07580
SPJ_RS07620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPJ_RS07620	SM00954	Region found in RelA / SpoT proteins
SPJ_RS07635	SM00849	Metallo-beta-lactamase superfamily
SPJ_RS07645	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07675	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07685	SM00855	Phosphoglycerate mutase family
SPJ_RS07725	SM00363	S4 RNA-binding domain
SPJ_RS07745	SM00864	Tubulin/FtsZ family, GTPase domain
SPJ_RS07745	SM00865	Tubulin/FtsZ family, C-terminal domain
SPJ_RS07750	SM00842	Cell division protein FtsA
SPJ_RS07775	SM00493	SPJ_RS07775
SPJ_RS07795	SM01130	SPJ_RS07795
SPJ_RS07875	SM00282	Laminin G domain
SPJ_RS07895	SM00487	DEAD-like helicases superfamily
SPJ_RS07895	SM00490	helicase superfamily c-terminal domain
SPJ_RS07900	SM01005	Alanine racemase, C-terminal domain
SPJ_RS07920	SM00957	SecA DEAD-like domain
SPJ_RS07920	SM00958	SecA preprotein cross-linking domain
SPJ_RS07930	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS07950	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS07990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPJ_RS07995	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08010	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08045	SM00640	Glycosyl hydrolases family 32
SPJ_RS08050	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS08090	SM00220	Serine/Threonine protein kinases, catalytic domain
SPJ_RS08090	SM00740	SPJ_RS08090
SPJ_RS08095	SM00331	Sigma factor PP2C-like phosphatases
SPJ_RS08095	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SPJ_RS08110	SM00487	DEAD-like helicases superfamily
SPJ_RS08110	SM00490	helicase superfamily c-terminal domain
SPJ_RS08115	SM01409	SPJ_RS08115
SPJ_RS08120	SM00072	Guanylate kinase homologues.
SPJ_RS08125	SM00322	K homology RNA-binding domain
SPJ_RS08125	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPJ_RS08160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SPJ_RS08170	SM01103	SPJ_RS08170
SPJ_RS08225	SM00957	SecA DEAD-like domain
SPJ_RS08225	SM00958	SecA preprotein cross-linking domain
SPJ_RS08300	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPJ_RS08365	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08405	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08415	SM00640	Glycosyl hydrolases family 32
SPJ_RS08435	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS08530	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS08585	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS08605	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08645	SM00710	Parallel beta-helix repeats
SPJ_RS08670	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08675	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08750	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS08760	SM00422	helix_turn_helix, mercury resistance
SPJ_RS08785	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08795	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPJ_RS08830	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08840	SM01234	SPJ_RS08840
SPJ_RS08845	SM00363	S4 RNA-binding domain
SPJ_RS08865	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPJ_RS08890	SM00642	Alpha-amylase domain
SPJ_RS08900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPJ_RS08900	SM00866	SPJ_RS08900
SPJ_RS08905	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08920	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08925	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS08950	SM00642	Alpha-amylase domain
SPJ_RS08980	SM00342	helix_turn_helix, arabinose operon control protein
SPJ_RS09145	SM00883	Chaperonin 10 Kd subunit
SPJ_RS09160	SM00644	SPJ_RS09160
SPJ_RS09245	SM00959	Rho termination factor, N-terminal domain
SPJ_RS09430	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS09440	SM00857	Resolvase, N terminal domain
SPJ_RS09475	SM00850	LytTr DNA-binding domain
SPJ_RS09480	SM00014	Acid phosphatase homologues
SPJ_RS09495	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS09580	SM00644	SPJ_RS09580
SPJ_RS09590	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS09595	SM00852	Probable molybdopterin binding domain
SPJ_RS09620	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS09640	SM01260	SPJ_RS09640
SPJ_RS09655	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS09670	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS09680	SM00562	SPJ_RS09680
SPJ_RS09685	SM00663	RNA polymerase I subunit A N-terminus
SPJ_RS09700	SM01091	Transporter associated domain
SPJ_RS09705	SM00892	DNA/RNA non-specific endonuclease
SPJ_RS09795	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SPJ_RS09810	SM00650	Ribosomal RNA adenine dimethylases
SPJ_RS09820	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS09840	SM00493	SPJ_RS09840
SPJ_RS09880	SM00870	SPJ_RS09880
SPJ_RS09890	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS09895	SM00421	helix_turn_helix, Lux Regulon
SPJ_RS09895	SM00448	cheY-homologous receiver domain
SPJ_RS09910	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10000	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SPJ_RS10000	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SPJ_RS10025	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SPJ_RS10060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SPJ_RS10060	SM00866	SPJ_RS10060
SPJ_RS10090	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SPJ_RS10095	SM00226	Low molecular weight phosphatase family
SPJ_RS10100	SM01323	SPJ_RS10100
SPJ_RS10105	SM00861	Transketolase, pyrimidine binding domain
SPJ_RS10120	SM01007	Class II Aldolase and Adducin N-terminal domain
SPJ_RS10130	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SPJ_RS10155	SM00393	Putative single-stranded nucleic acids-binding domain
SPJ_RS10155	SM01245	SPJ_RS10155
SPJ_RS10215	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10225	SM00829	Enoylreductase
SPJ_RS10260	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPJ_RS10265	SM00257	Lysin motif
SPJ_RS10395	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10405	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10410	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SPJ_RS10410	SM00534	ATPase domain of DNA mismatch repair MUTS family
SPJ_RS10420	SM00836	DALR anticodon binding domain
SPJ_RS10420	SM01016	Arginyl tRNA synthetase N terminal dom
SPJ_RS10435	SM00448	cheY-homologous receiver domain
SPJ_RS10435	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS10440	SM00387	Histidine kinase-like ATPases
SPJ_RS10440	SM00388	His Kinase A (phosphoacceptor) domain
SPJ_RS10460	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10475	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS10520	SM00363	S4 RNA-binding domain
SPJ_RS10585	SM00354	helix_turn _helix lactose operon repressor
SPJ_RS10630	SM00530	Helix-turn-helix XRE-family like proteins 
SPJ_RS10675	SM00861	Transketolase, pyrimidine binding domain
SPJ_RS10700	SM00244	prohibitin homologues
SPJ_RS10755	SM00872	Alpha mannosidase, middle domain
SPJ_RS10760	SM01149	SPJ_RS10760
SPJ_RS10770	SM00812	Alpha-L-fucosidase
SPJ_RS10815	SM00244	prohibitin homologues
SPJ_RS10830	SM00607	eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain
SPJ_RS10865	SM01007	Class II Aldolase and Adducin N-terminal domain
SPJ_RS10875	SM00420	helix_turn_helix, Deoxyribose operon repressor
SPJ_RS10875	SM01134	SPJ_RS10875
SPJ_RS10890	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10895	SM00347	helix_turn_helix multiple antibiotic resistance protein
SPJ_RS10895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SPJ_RS10985	SM00387	Histidine kinase-like ATPases
SPJ_RS10985	SM00388	His Kinase A (phosphoacceptor) domain
SPJ_RS10990	SM00448	cheY-homologous receiver domain
SPJ_RS10990	SM00862	Transcriptional regulatory protein, C terminal
SPJ_RS10995	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS10995	SM01086	C-terminal, D2-small domain, of ClpB protein
SPJ_RS11005	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS11025	SM00287	Bacterial SH3 domain homologues
SPJ_RS11060	SM00487	DEAD-like helicases superfamily
SPJ_RS11060	SM00490	helicase superfamily c-terminal domain
SPJ_RS11120	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS11125	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS11160	SM00116	Domain in cystathionine beta-synthase and other proteins.
SPJ_RS11160	SM01240	SPJ_RS11160
SPJ_RS11170	SM00382	ATPases associated with a variety of cellular activities
SPJ_RS11210	SM00448	cheY-homologous receiver domain
SPJ_RS11210	SM00850	LytTr DNA-binding domain
SPJ_RS11235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SPJ_RS11240	SM00470	ParB-like nuclease domain
SPJ_RS11310	SM00382	ATPases associated with a variety of cellular activities
