locus-tag class description SP_RS00005 PF00308 Bacterial dnaA protein SP_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SP_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SP_RS00010 PF02767 DNA polymerase III beta subunit, central domain SP_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SP_RS00020 PF06071 Protein of unknown function (DUF933) SP_RS00020 PF01926 50S ribosome-binding GTPase SP_RS00025 PF01195 Peptidyl-tRNA hydrolase SP_RS00030 PF00270 DEAD/DEAH box helicase SP_RS00030 PF00271 Helicase conserved C-terminal domain SP_RS00030 PF02559 CarD-like/TRCF domain SP_RS00030 PF17757 UvrB interaction domain SP_RS00030 PF03461 TRCF domain SP_RS00035 PF01479 S4 domain SP_RS00055 PF11734 TilS substrate C-terminal domain SP_RS00055 PF01171 PP-loop family SP_RS00060 PF00156 Phosphoribosyl transferase domain SP_RS00065 PF06480 FtsH Extracellular SP_RS00065 PF17862 AAA+ lid domain SP_RS00065 PF00004 ATPase family associated with various cellular activities (AAA) SP_RS00065 PF01434 Peptidase family M41 SP_RS00135 PF00709 Adenylosuccinate synthetase SP_RS00140 PF14437 MafB19-like deaminase SP_RS00145 PF00692 dUTPase SP_RS00160 PF00484 Carbonic anhydrase SP_RS00175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SP_RS00175 PF14572 Phosphoribosyl synthetase-associated domain SP_RS00195 PF01367 5'-3' exonuclease, C-terminal SAM fold SP_RS00195 PF00476 DNA polymerase family A SP_RS00195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SP_RS00200 PF13380 CoA binding domain SP_RS00210 PF03601 Conserved hypothetical protein 698 SP_RS00215 PF00155 Aminotransferase class I and II SP_RS00220 PF02565 Recombination protein O C terminal SP_RS00220 PF11967 Recombination protein O N terminal SP_RS00225 PF02504 Fatty acid synthesis protein SP_RS00230 PF00550 Phosphopantetheine attachment site SP_RS00255 PF00005 ABC transporter SP_RS00255 PF00664 ABC transporter transmembrane region SP_RS00255 PF03412 Peptidase C39 family SP_RS00265 PF01259 SAICAR synthetase SP_RS00270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SP_RS00270 PF00586 AIR synthase related protein, N-terminal domain SP_RS00270 PF02769 AIR synthase related protein, C-terminal domain SP_RS00275 PF00156 Phosphoribosyl transferase domain SP_RS00280 PF02769 AIR synthase related protein, C-terminal domain SP_RS00280 PF00586 AIR synthase related protein, N-terminal domain SP_RS00285 PF00551 Formyl transferase SP_RS00290 PF04892 VanZ like family SP_RS00295 PF02142 MGS-like domain SP_RS00295 PF01808 AICARFT/IMPCHase bienzyme SP_RS00300 PF02843 Phosphoribosylglycinamide synthetase, C domain SP_RS00300 PF02844 Phosphoribosylglycinamide synthetase, N domain SP_RS00300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SP_RS00305 PF00731 AIR carboxylase SP_RS00310 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SP_RS00310 PF02222 ATP-grasp domain SP_RS00310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SP_RS00320 PF10397 Adenylosuccinate lyase C-terminus SP_RS00320 PF00206 Lyase SP_RS00325 PF04650 YSIRK type signal peptide SP_RS00325 PF00728 Glycosyl hydrolase family 20, catalytic domain SP_RS00325 PF00746 LPXTG cell wall anchor motif SP_RS00325 PF07501 G5 domain SP_RS00330 PF07702 UTRA domain SP_RS00330 PF00392 Bacterial regulatory proteins, gntR family SP_RS00335 PF01301 Glycosyl hydrolases family 35 SP_RS00340 PF03830 PTS system sorbose subfamily IIB component SP_RS00345 PF03609 PTS system sorbose-specific iic component SP_RS00350 PF03613 PTS system mannose/fructose/sorbose family IID component SP_RS00360 PF01380 SIS domain SP_RS00365 PF01263 Aldose 1-epimerase SP_RS00380 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SP_RS00380 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SP_RS00380 PF07501 G5 domain SP_RS00380 PF04650 YSIRK type signal peptide SP_RS00385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SP_RS00390 PF12464 Maltose acetyltransferase SP_RS00390 PF14602 Hexapeptide repeat of succinyl-transferase SP_RS00405 PF02386 Cation transport protein SP_RS00410 PF02254 TrkA-N domain SP_RS00410 PF02080 TrkA-C domain SP_RS00415 PF00535 Glycosyl transferase family 2 SP_RS00430 PF00072 Response regulator receiver domain SP_RS00430 PF00486 Transcriptional regulatory protein, C terminal SP_RS00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS00435 PF00512 His Kinase A (phospho-acceptor) domain SP_RS00440 PF01479 S4 domain SP_RS00440 PF00163 Ribosomal protein S4/S9 N-terminal domain SP_RS00460 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS00465 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS00475 PF12010 Domain of unknown function (DUF3502) SP_RS00480 PF00581 Rhodanese-like domain SP_RS00480 PF12368 Rhodanase C-terminal SP_RS00480 PF17773 UPF0176 acylphosphatase like domain SP_RS00505 PF03551 Transcriptional regulator PadR-like family SP_RS00505 PF10400 Virulence activator alpha C-term SP_RS00520 PF02719 Polysaccharide biosynthesis protein SP_RS00530 PF13419 Haloacid dehalogenase-like hydrolase SP_RS00535 PF03313 Serine dehydratase alpha chain SP_RS00540 PF01842 ACT domain SP_RS00540 PF03315 Serine dehydratase beta chain SP_RS00565 PF12704 MacB-like periplasmic core domain SP_RS00565 PF02687 FtsX-like permease family SP_RS00565 PF00005 ABC transporter SP_RS00570 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS00575 PF00764 Arginosuccinate synthase SP_RS00605 PF00293 NUDIX domain SP_RS00610 PF13932 GidA associated domain SP_RS00610 PF01134 Glucose inhibited division protein A SP_RS00620 PF17770 Ribonuclease J C-terminal domain SP_RS00620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SP_RS00620 PF00753 Metallo-beta-lactamase superfamily SP_RS00625 PF07288 Protein of unknown function (DUF1447) SP_RS00645 PF00814 Glycoprotease family SP_RS00655 PF00814 Glycoprotease family SP_RS00660 PF13683 Integrase core domain SP_RS00660 PF01610 Transposase SP_RS00690 PF13439 Glycosyltransferase Family 4 SP_RS00690 PF00534 Glycosyl transferases group 1 SP_RS00695 PF00535 Glycosyl transferase family 2 SP_RS00700 PF03412 Peptidase C39 family SP_RS00700 PF00005 ABC transporter SP_RS00700 PF00664 ABC transporter transmembrane region SP_RS00725 PF01381 Helix-turn-helix SP_RS00765 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS00770 PF03180 NLPA lipoprotein SP_RS00775 PF07687 Peptidase dimerisation domain SP_RS00775 PF01546 Peptidase family M20/M25/M40 SP_RS00780 PF09383 NIL domain SP_RS00780 PF00005 ABC transporter SP_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS00800 PF00672 HAMP domain SP_RS00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS00800 PF06580 Histidine kinase SP_RS00800 PF02743 Cache domain SP_RS00805 PF00072 Response regulator receiver domain SP_RS00805 PF12833 Helix-turn-helix domain SP_RS00815 PF07972 NrdI Flavodoxin like SP_RS00830 PF04397 LytTr DNA-binding domain SP_RS00840 PF02441 Flavoprotein SP_RS00845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SP_RS00845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SP_RS00865 PF08676 MutL C terminal dimerisation domain SP_RS00865 PF01119 DNA mismatch repair protein, C-terminal domain SP_RS00870 PF00885 6,7-dimethyl-8-ribityllumazine synthase SP_RS00875 PF00925 GTP cyclohydrolase II SP_RS00875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SP_RS00880 PF00677 Lumazine binding domain SP_RS00885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SP_RS00885 PF01872 RibD C-terminal domain SP_RS00890 PF07499 RuvA, C-terminal domain SP_RS00890 PF01330 RuvA N terminal domain SP_RS00895 PF03352 Methyladenine glycosylase SP_RS00920 PF17760 UvrA interaction domain SP_RS00920 PF17755 UvrA DNA-binding domain SP_RS00920 PF00005 ABC transporter SP_RS00925 PF01321 Creatinase/Prolidase N-terminal domain SP_RS00925 PF00557 Metallopeptidase family M24 SP_RS00930 PF03960 ArsC family SP_RS00940 PF06135 IreB regulatory phosphoprotein SP_RS00945 PF03652 Holliday junction resolvase SP_RS00950 PF06949 Protein of unknown function (DUF1292) SP_RS00955 PF02875 Mur ligase family, glutamate ligase domain SP_RS00955 PF08245 Mur ligase middle domain SP_RS00965 PF13091 PLD-like domain SP_RS00980 PF03477 ATP cone domain SP_RS00980 PF13597 Anaerobic ribonucleoside-triphosphate reductase SP_RS01005 PF00338 Ribosomal protein S10p/S20e SP_RS01010 PF00297 Ribosomal protein L3 SP_RS01015 PF00573 Ribosomal protein L4/L1 family SP_RS01020 PF00276 Ribosomal protein L23 SP_RS01025 PF03947 Ribosomal Proteins L2, C-terminal domain SP_RS01025 PF00181 Ribosomal Proteins L2, RNA binding domain SP_RS01030 PF00203 Ribosomal protein S19 SP_RS01035 PF00237 Ribosomal protein L22p/L17e SP_RS01040 PF00189 Ribosomal protein S3, C-terminal domain SP_RS01040 PF07650 KH domain SP_RS01045 PF00252 Ribosomal protein L16p/L10e SP_RS01050 PF00831 Ribosomal L29 protein SP_RS01055 PF00366 Ribosomal protein S17 SP_RS01060 PF00238 Ribosomal protein L14p/L23e SP_RS01065 PF00467 KOW motif SP_RS01065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SP_RS01070 PF00673 ribosomal L5P family C-terminus SP_RS01070 PF00281 Ribosomal protein L5 SP_RS01075 PF00253 Ribosomal protein S14p/S29e SP_RS01080 PF00410 Ribosomal protein S8 SP_RS01085 PF00347 Ribosomal protein L6 SP_RS01090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SP_RS01095 PF03719 Ribosomal protein S5, C-terminal domain SP_RS01095 PF00333 Ribosomal protein S5, N-terminal domain SP_RS01100 PF00327 Ribosomal protein L30p/L7e SP_RS01105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SP_RS01110 PF00344 SecY translocase SP_RS01120 PF01176 Translation initiation factor 1A / IF-1 SP_RS01125 PF00444 Ribosomal protein L36 SP_RS01130 PF00416 Ribosomal protein S13/S18 SP_RS01135 PF00411 Ribosomal protein S11 SP_RS01140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SP_RS01140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SP_RS01140 PF01000 RNA polymerase Rpb3/RpoA insert domain SP_RS01145 PF01196 Ribosomal protein L17 SP_RS01155 PF05167 Uncharacterised ACR (DUF711) SP_RS01170 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS01180 PF08402 TOBE domain SP_RS01180 PF00005 ABC transporter SP_RS01190 PF04055 Radical SAM superfamily SP_RS01195 PF08220 DeoR-like helix-turn-helix domain SP_RS01195 PF00455 DeoR C terminal sensor domain SP_RS01200 PF13936 Helix-turn-helix domain SP_RS01200 PF04198 Putative sugar-binding domain SP_RS01205 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP_RS01210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS01215 PF02378 Phosphotransferase system, EIIC SP_RS01220 PF01228 Glycine radical SP_RS01220 PF02901 Pyruvate formate lyase-like SP_RS01225 PF00923 Transaldolase/Fructose-6-phosphate aldolase SP_RS01230 PF00465 Iron-containing alcohol dehydrogenase SP_RS01235 PF09334 tRNA synthetases class I (M) SP_RS01235 PF13603 Leucyl-tRNA synthetase, Domain 2 SP_RS01235 PF08264 Anticodon-binding domain of tRNA SP_RS01235 PF00133 tRNA synthetases class I (I, L, M and V) SP_RS01255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SP_RS01270 PF05491 RuvB C-terminal winged helix domain SP_RS01270 PF17864 RuvB AAA lid domain SP_RS01270 PF05496 Holliday junction DNA helicase RuvB P-loop domain SP_RS01280 PF01255 Putative undecaprenyl diphosphate synthase SP_RS01290 PF02163 Peptidase family M50 SP_RS01295 PF03129 Anticodon binding domain SP_RS01295 PF04073 Aminoacyl-tRNA editing domain SP_RS01295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SP_RS01300 PF00232 Glycosyl hydrolase family 1 SP_RS01305 PF01380 SIS domain SP_RS01315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SP_RS01315 PF03714 Bacterial pullanase-associated domain SP_RS01315 PF00128 Alpha amylase, catalytic domain SP_RS01320 PF00164 Ribosomal protein S12/S23 SP_RS01325 PF00177 Ribosomal protein S7p/S5e SP_RS01330 PF00009 Elongation factor Tu GTP binding domain SP_RS01330 PF03764 Elongation factor G, domain IV SP_RS01330 PF14492 Elongation Factor G, domain II SP_RS01330 PF00679 Elongation factor G C-terminus SP_RS01330 PF03144 Elongation factor Tu domain 2 SP_RS01335 PF00929 Exonuclease SP_RS01335 PF02811 PHP domain SP_RS01335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SP_RS01335 PF07733 Bacterial DNA polymerase III alpha NTPase domain SP_RS01335 PF11490 DNA polymerase III polC-type N-terminus II SP_RS01335 PF14480 DNA polymerase III polC-type N-terminus I SP_RS01355 PF02073 Thermophilic metalloprotease (M29) SP_RS01360 PF04226 Transglycosylase associated protein SP_RS01370 PF01479 S4 domain SP_RS01370 PF00849 RNA pseudouridylate synthase SP_RS01380 PF03051 Peptidase C1-like family SP_RS01385 PF03613 PTS system mannose/fructose/sorbose family IID component SP_RS01390 PF03609 PTS system sorbose-specific iic component SP_RS01395 PF03830 PTS system sorbose subfamily IIB component SP_RS01395 PF03610 PTS system fructose IIA component SP_RS01400 PF00107 Zinc-binding dehydrogenase SP_RS01400 PF08240 Alcohol dehydrogenase GroES-like domain SP_RS01410 PF00860 Permease family SP_RS01420 PF00809 Pterin binding enzyme SP_RS01425 PF02875 Mur ligase family, glutamate ligase domain SP_RS01425 PF08245 Mur ligase middle domain SP_RS01430 PF01227 GTP cyclohydrolase I SP_RS01435 PF02152 Dihydroneopterin aldolase SP_RS01435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SP_RS01445 PF00572 Ribosomal protein L13 SP_RS01450 PF00380 Ribosomal protein S9/S16 SP_RS01455 PF13635 Domain of unknown function (DUF4143) SP_RS01455 PF13173 AAA domain SP_RS01480 PF00232 Glycosyl hydrolase family 1 SP_RS01485 PF04193 PQ loop repeat SP_RS01490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS01500 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP_RS01510 PF02378 Phosphotransferase system, EIIC SP_RS01520 PF16338 Domain of unknown function (DUF4968) SP_RS01520 PF01055 Glycosyl hydrolases family 31 SP_RS01520 PF13802 Galactose mutarotase-like SP_RS01520 PF17137 Domain of unknown function (DUF5110) SP_RS01525 PF00255 Glutathione peroxidase SP_RS01530 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SP_RS01530 PF02278 Polysaccharide lyase family 8, super-sandwich domain SP_RS01530 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SP_RS01535 PF01797 Transposase IS200 like SP_RS01545 PF00294 pfkB family carbohydrate kinase SP_RS01565 PF07470 Glycosyl Hydrolase Family 88 SP_RS01570 PF03830 PTS system sorbose subfamily IIB component SP_RS01575 PF03609 PTS system sorbose-specific iic component SP_RS01580 PF03613 PTS system mannose/fructose/sorbose family IID component SP_RS01605 PF00356 Bacterial regulatory proteins, lacI family SP_RS01630 PF01795 MraW methylase family SP_RS01640 PF03717 Penicillin-binding Protein dimerisation domain SP_RS01640 PF00905 Penicillin binding protein transpeptidase domain SP_RS01640 PF03793 PASTA domain SP_RS01645 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SP_RS01645 PF00953 Glycosyl transferase family 4 SP_RS01650 PF00004 ATPase family associated with various cellular activities (AAA) SP_RS01650 PF07724 AAA domain (Cdc48 subfamily) SP_RS01650 PF10431 C-terminal, D2-small domain, of ClpB protein SP_RS01650 PF17871 AAA lid domain SP_RS01655 PF02664 S-Ribosylhomocysteinase (LuxS) SP_RS01660 PF08903 Domain of unknown function (DUF1846) SP_RS01665 PF16657 Maltogenic Amylase, C-terminal domain SP_RS01665 PF00128 Alpha amylase, catalytic domain SP_RS01700 PF02706 Chain length determinant protein SP_RS01705 PF13614 AAA domain SP_RS01710 PF02397 Bacterial sugar transferase SP_RS01725 PF13439 Glycosyltransferase Family 4 SP_RS01725 PF00534 Glycosyl transferases group 1 SP_RS01745 PF02350 UDP-N-acetylglucosamine 2-epimerase SP_RS01750 PF08485 Polysaccharide biosynthesis protein C-terminal SP_RS01750 PF02719 Polysaccharide biosynthesis protein SP_RS01755 PF01370 NAD dependent epimerase/dehydratase family SP_RS01760 PF02350 UDP-N-acetylglucosamine 2-epimerase SP_RS01765 PF03050 Transposase IS66 family SP_RS01765 PF13007 Transposase C of IS166 homeodomain SP_RS01765 PF13005 zinc-finger binding domain of transposase IS66 SP_RS01765 PF13817 IS66 C-terminal element SP_RS01775 PF13358 DDE superfamily endonuclease SP_RS01790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SP_RS01795 PF04650 YSIRK type signal peptide SP_RS01795 PF12905 Endo-alpha-N-acetylgalactosaminidase SP_RS01795 PF17451 Glycosyl hydrolase 101 beta sandwich domain SP_RS01795 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal SP_RS01795 PF17974 Galactose-binding domain-like SP_RS01795 PF00754 F5/8 type C domain SP_RS01795 PF18080 Galactose mutarotase-like fold domain SP_RS01800 PF00912 Transglycosylase SP_RS01800 PF00905 Penicillin binding protein transpeptidase domain SP_RS01805 PF03838 Recombination protein U SP_RS01810 PF06908 YspA SLOG family SP_RS01815 PF05103 DivIVA protein SP_RS01825 PF01170 Putative RNA methylase family UPF0020 SP_RS01825 PF02926 THUMP domain SP_RS01830 PF18041 MapZ extracellular domain 1 SP_RS01830 PF18708 MapZ extracellular C-terminal domain 2 SP_RS01835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SP_RS01835 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SP_RS01840 PF00486 Transcriptional regulatory protein, C terminal SP_RS01840 PF00072 Response regulator receiver domain SP_RS01870 PF00288 GHMP kinases N terminal domain SP_RS01870 PF10509 Galactokinase galactose-binding signature SP_RS01870 PF08544 GHMP kinases C terminal SP_RS01880 PF00288 GHMP kinases N terminal domain SP_RS01880 PF08544 GHMP kinases C terminal SP_RS01885 PF01070 FMN-dependent dehydrogenase SP_RS01895 PF07730 Histidine kinase SP_RS01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS01900 PF00196 Bacterial regulatory proteins, luxR family SP_RS01900 PF00072 Response regulator receiver domain SP_RS01935 PF13333 Integrase core domain SP_RS01935 PF00665 Integrase core domain SP_RS01955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS01955 PF02378 Phosphotransferase system, EIIC SP_RS01960 PF08279 HTH domain SP_RS01960 PF05043 Mga helix-turn-helix domain SP_RS01960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP_RS01965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP_RS01970 PF01232 Mannitol dehydrogenase Rossmann domain SP_RS01970 PF08125 Mannitol dehydrogenase C-terminal domain SP_RS01985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SP_RS01985 PF05698 Bacterial trigger factor protein (TF) C-terminus SP_RS01985 PF05697 Bacterial trigger factor protein (TF) SP_RS01990 PF14490 Helix-hairpin-helix containing domain SP_RS01990 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SP_RS01990 PF13538 UvrD-like helicase C-terminal domain SP_RS01995 PF10502 Signal peptidase, peptidase S26 SP_RS02000 PF01351 Ribonuclease HII SP_RS02000 PF11858 Domain of unknown function (DUF3378) SP_RS02015 PF01713 Smr domain SP_RS02015 PF00488 MutS domain V SP_RS02020 PF01235 Sodium:alanine symporter family SP_RS02035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SP_RS02035 PF02403 Seryl-tRNA synthetase N-terminal domain SP_RS02045 PF00696 Amino acid kinase family SP_RS02045 PF13840 ACT domain SP_RS02050 PF00378 Enoyl-CoA hydratase/isomerase SP_RS02055 PF01047 MarR family SP_RS02060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SP_RS02060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SP_RS02065 PF00550 Phosphopantetheine attachment site SP_RS02070 PF03060 Nitronate monooxygenase SP_RS02075 PF00698 Acyl transferase domain SP_RS02085 PF02801 Beta-ketoacyl synthase, C-terminal domain SP_RS02085 PF00109 Beta-ketoacyl synthase, N-terminal domain SP_RS02090 PF00364 Biotin-requiring enzyme SP_RS02095 PF07977 FabA-like domain SP_RS02100 PF02785 Biotin carboxylase C-terminal domain SP_RS02100 PF00289 Biotin carboxylase, N-terminal domain SP_RS02100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SP_RS02105 PF01039 Carboxyl transferase domain SP_RS02110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SP_RS02130 PF13683 Integrase core domain SP_RS02130 PF01610 Transposase SP_RS02135 PF01029 NusB family SP_RS02140 PF03780 Asp23 family, cell envelope-related function SP_RS02145 PF01132 Elongation factor P (EF-P) OB domain SP_RS02145 PF08207 Elongation factor P (EF-P) KOW-like domain SP_RS02145 PF09285 Elongation factor P, C-terminal SP_RS02150 PF02934 GatB/GatE catalytic domain SP_RS02150 PF02637 GatB domain SP_RS02155 PF01425 Amidase SP_RS02160 PF02686 Glu-tRNAGln amidotransferase C subunit SP_RS02165 PF03144 Elongation factor Tu domain 2 SP_RS02165 PF16658 Class II release factor RF3, C-terminal domain SP_RS02165 PF00009 Elongation factor Tu GTP binding domain SP_RS02175 PF00830 Ribosomal L28 family SP_RS02180 PF03780 Asp23 family, cell envelope-related function SP_RS02185 PF02734 DAK2 domain SP_RS02185 PF13684 Dihydroxyacetone kinase family SP_RS02190 PF00205 Thiamine pyrophosphate enzyme, central domain SP_RS02190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SP_RS02190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SP_RS02195 PF10369 Small subunit of acetolactate synthase SP_RS02195 PF01842 ACT domain SP_RS02200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SP_RS02200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SP_RS02215 PF00291 Pyridoxal-phosphate dependent enzyme SP_RS02215 PF00585 C-terminal regulatory domain of Threonine dehydratase SP_RS02225 PF00005 ABC transporter SP_RS02230 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS02255 PF02673 Bacitracin resistance protein BacA SP_RS02260 PF11799 impB/mucB/samB family C-terminal domain SP_RS02260 PF11798 IMS family HHH motif SP_RS02260 PF00817 impB/mucB/samB family SP_RS02265 PF01228 Glycine radical SP_RS02265 PF02901 Pyruvate formate lyase-like SP_RS02270 PF13683 Integrase core domain SP_RS02270 PF01610 Transposase SP_RS02310 PF01610 Transposase SP_RS02310 PF13683 Integrase core domain SP_RS02335 PF00480 ROK family SP_RS02340 PF02378 Phosphotransferase system, EIIC SP_RS02350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP_RS02355 PF00232 Glycosyl hydrolase family 1 SP_RS02360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS02360 PF02378 Phosphotransferase system, EIIC SP_RS02365 PF02386 Cation transport protein SP_RS02370 PF02254 TrkA-N domain SP_RS02370 PF02080 TrkA-C domain SP_RS02380 PF07155 ECF-type riboflavin transporter, S component SP_RS02390 PF00005 ABC transporter SP_RS02390 PF12558 ATP-binding cassette cobalt transporter SP_RS02400 PF00588 SpoU rRNA Methylase family SP_RS02405 PF12822 ECF transporter, substrate-specific component SP_RS02410 PF01569 PAP2 superfamily SP_RS02425 PF05066 HB1, ASXL, restriction endonuclease HTH domain SP_RS02435 PF06418 CTP synthase N-terminus SP_RS02435 PF00117 Glutamine amidotransferase class-I SP_RS02445 PF02690 Na+/Pi-cotransporter SP_RS02455 PF00162 Phosphoglycerate kinase SP_RS02460 PF06081 Aromatic acid exporter family member 1 SP_RS02465 PF13411 MerR HTH family regulatory protein SP_RS02470 PF00120 Glutamine synthetase, catalytic domain SP_RS02470 PF03951 Glutamine synthetase, beta-Grasp domain SP_RS02480 PF01420 Type I restriction modification DNA specificity domain SP_RS02485 PF00589 Phage integrase family SP_RS02485 PF02899 Phage integrase, N-terminal SAM-like domain SP_RS02495 PF01420 Type I restriction modification DNA specificity domain SP_RS02500 PF02384 N-6 DNA Methylase SP_RS02500 PF12161 HsdM N-terminal domain SP_RS02505 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SP_RS02505 PF08463 EcoEI R protein C-terminal SP_RS02505 PF04851 Type III restriction enzyme, res subunit SP_RS02505 PF00271 Helicase conserved C-terminal domain SP_RS02520 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SP_RS02520 PF01628 HrcA protein C terminal domain SP_RS02525 PF01025 GrpE SP_RS02530 PF00012 Hsp70 protein SP_RS02540 PF01556 DnaJ C terminal domain SP_RS02540 PF00684 DnaJ central domain SP_RS02540 PF00226 DnaJ domain SP_RS02550 PF01230 HIT domain SP_RS02555 PF00005 ABC transporter SP_RS02580 PF17203 Single cache domain 3 SP_RS02580 PF00989 PAS fold SP_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS02580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SP_RS02595 PF00664 ABC transporter transmembrane region SP_RS02595 PF00005 ABC transporter SP_RS02595 PF03412 Peptidase C39 family SP_RS02600 PF00664 ABC transporter transmembrane region SP_RS02600 PF00005 ABC transporter SP_RS02600 PF03412 Peptidase C39 family SP_RS02605 PF00005 ABC transporter SP_RS02605 PF03412 Peptidase C39 family SP_RS02605 PF00664 ABC transporter transmembrane region SP_RS02695 PF02517 CPBP intramembrane metalloprotease SP_RS02705 PF02390 Putative methyltransferase SP_RS02710 PF17384 RimP C-terminal SH3 domain SP_RS02710 PF02576 RimP N-terminal domain SP_RS02715 PF08529 NusA N-terminal domain SP_RS02715 PF13184 NusA-like KH domain SP_RS02715 PF00575 S1 RNA binding domain SP_RS02720 PF04296 Protein of unknown function (DUF448) SP_RS02725 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SP_RS02730 PF00009 Elongation factor Tu GTP binding domain SP_RS02730 PF11987 Translation-initiation factor 2 SP_RS02730 PF04760 Translation initiation factor IF-2, N-terminal region SP_RS02735 PF02033 Ribosome-binding factor A SP_RS02780 PF00958 GMP synthase C terminal domain SP_RS02780 PF00117 Glutamine amidotransferase class-I SP_RS02780 PF03352 Methyladenine glycosylase SP_RS02780 PF13302 Acetyltransferase (GNAT) domain SP_RS02780 PF13673 Acetyltransferase (GNAT) domain SP_RS02790 PF00133 tRNA synthetases class I (I, L, M and V) SP_RS02790 PF10458 Valyl tRNA synthetase tRNA binding arm SP_RS02790 PF08264 Anticodon-binding domain of tRNA SP_RS02805 PF02661 Fic/DOC family SP_RS02805 PF17841 BID domain of Bartonella effector protein (Bep) SP_RS02850 PF03123 CAT RNA binding domain SP_RS02850 PF00874 PRD domain SP_RS02855 PF00367 phosphotransferase system, EIIB SP_RS02855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP_RS02855 PF02378 Phosphotransferase system, EIIC SP_RS02860 PF00232 Glycosyl hydrolase family 1 SP_RS02865 PF01409 tRNA synthetases class II core domain (F) SP_RS02865 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SP_RS02870 PF00583 Acetyltransferase (GNAT) family SP_RS02875 PF03147 Ferredoxin-fold anticodon binding domain SP_RS02875 PF03484 tRNA synthetase B5 domain SP_RS02875 PF03483 B3/4 domain SP_RS02875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SP_RS02875 PF01588 Putative tRNA binding domain SP_RS02895 PF01381 Helix-turn-helix SP_RS02900 PF01717 Cobalamin-independent synthase, Catalytic domain SP_RS02900 PF08267 Cobalamin-independent synthase, N-terminal domain SP_RS02905 PF02219 Methylenetetrahydrofolate reductase SP_RS02910 PF01138 3' exoribonuclease family, domain 1 SP_RS02910 PF00575 S1 RNA binding domain SP_RS02910 PF00013 KH domain SP_RS02910 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SP_RS02910 PF03725 3' exoribonuclease family, domain 2 SP_RS02915 PF00132 Bacterial transferase hexapeptide (six repeats) SP_RS02915 PF06426 Serine acetyltransferase, N-terminal SP_RS02925 PF09190 DALR domain SP_RS02925 PF01406 tRNA synthetases class I (C) catalytic domain SP_RS02930 PF00636 Ribonuclease III domain SP_RS02935 PF13556 PucR C-terminal helix-turn-helix domain SP_RS02950 PF12704 MacB-like periplasmic core domain SP_RS02950 PF02687 FtsX-like permease family SP_RS02955 PF00005 ABC transporter SP_RS02960 PF12704 MacB-like periplasmic core domain SP_RS02960 PF02687 FtsX-like permease family SP_RS02965 PF00486 Transcriptional regulatory protein, C terminal SP_RS02965 PF00072 Response regulator receiver domain SP_RS02970 PF00672 HAMP domain SP_RS02970 PF00512 His Kinase A (phospho-acceptor) domain SP_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS02975 PF01116 Fructose-bisphosphate aldolase class-II SP_RS02980 PF00970 Oxidoreductase FAD-binding domain SP_RS02980 PF00111 2Fe-2S iron-sulfur cluster binding domain SP_RS02980 PF00175 Oxidoreductase NAD-binding domain SP_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS02995 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS03000 PF00005 ABC transporter SP_RS03005 PF01368 DHH family SP_RS03005 PF02272 DHHA1 domain SP_RS03005 PF17768 RecJ OB domain SP_RS03005 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SP_RS03010 PF00753 Metallo-beta-lactamase superfamily SP_RS03010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SP_RS03010 PF17770 Ribonuclease J C-terminal domain SP_RS03015 PF00756 Putative esterase SP_RS03035 PF01541 GIY-YIG catalytic domain SP_RS03035 PF02151 UvrB/uvrC motif SP_RS03035 PF08459 UvrC Helix-hairpin-helix N-terminal SP_RS03045 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS03050 PF00881 Nitroreductase family SP_RS03055 PF01546 Peptidase family M20/M25/M40 SP_RS03060 PF03167 Uracil DNA glycosylase superfamily SP_RS03070 PF05525 Branched-chain amino acid transport protein SP_RS03075 PF05343 M42 glutamyl aminopeptidase SP_RS03090 PF00298 Ribosomal protein L11, RNA binding domain SP_RS03090 PF03946 Ribosomal protein L11, N-terminal domain SP_RS03095 PF00687 Ribosomal protein L1p/L10e family SP_RS03115 PF00005 ABC transporter SP_RS03145 PF00082 Subtilase family SP_RS03150 PF03050 Transposase IS66 family SP_RS03150 PF13817 IS66 C-terminal element SP_RS03150 PF13007 Transposase C of IS166 homeodomain SP_RS03150 PF13005 zinc-finger binding domain of transposase IS66 SP_RS03165 PF03611 PTS system sugar-specific permease component SP_RS03175 PF16355 Domain of unknown function (DUF4982) SP_RS03175 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 SP_RS03175 PF00703 Glycosyl hydrolases family 2 SP_RS03175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SP_RS03175 PF02837 Glycosyl hydrolases family 2, sugar binding domain SP_RS03195 PF04055 Radical SAM superfamily SP_RS03195 PF16199 Radical_SAM C-terminal domain SP_RS03200 PF16199 Radical_SAM C-terminal domain SP_RS03200 PF04055 Radical SAM superfamily SP_RS03205 PF06962 Putative rRNA methylase SP_RS03215 PF00999 Sodium/hydrogen exchanger family SP_RS03230 PF02683 Cytochrome C biogenesis protein transmembrane region SP_RS03235 PF08534 Redoxin SP_RS03240 PF01625 Peptide methionine sulfoxide reductase SP_RS03240 PF01641 SelR domain SP_RS03245 PF00072 Response regulator receiver domain SP_RS03245 PF12833 Helix-turn-helix domain SP_RS03250 PF00672 HAMP domain SP_RS03250 PF06580 Histidine kinase SP_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS03250 PF02743 Cache domain SP_RS03255 PF04260 Protein of unknown function (DUF436) SP_RS03260 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SP_RS03260 PF00746 LPXTG cell wall anchor motif SP_RS03260 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SP_RS03265 PF04715 Anthranilate synthase component I, N terminal region SP_RS03265 PF00425 chorismate binding enzyme SP_RS03280 PF00480 ROK family SP_RS03285 PF00303 Thymidylate synthase SP_RS03300 PF13167 GTP-binding GTPase N-terminal SP_RS03300 PF16360 GTP-binding GTPase Middle Region SP_RS03300 PF01926 50S ribosome-binding GTPase SP_RS03305 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SP_RS03305 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SP_RS03310 PF12706 Beta-lactamase superfamily domain SP_RS03310 PF00753 Metallo-beta-lactamase superfamily SP_RS03315 PF00106 short chain dehydrogenase SP_RS03320 PF03466 LysR substrate binding domain SP_RS03320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SP_RS03330 PF00581 Rhodanese-like domain SP_RS03340 PF01479 S4 domain SP_RS03340 PF00849 RNA pseudouridylate synthase SP_RS03345 PF00679 Elongation factor G C-terminus SP_RS03345 PF14492 Elongation Factor G, domain II SP_RS03345 PF03144 Elongation factor Tu domain 2 SP_RS03345 PF00009 Elongation factor Tu GTP binding domain SP_RS03365 PF00005 ABC transporter SP_RS03370 PF08245 Mur ligase middle domain SP_RS03370 PF02875 Mur ligase family, glutamate ligase domain SP_RS03375 PF03033 Glycosyltransferase family 28 N-terminal domain SP_RS03375 PF04101 Glycosyltransferase family 28 C-terminal domain SP_RS03380 PF08478 POTRA domain, FtsQ-type SP_RS03420 PF13936 Helix-turn-helix domain SP_RS03420 PF00665 Integrase core domain SP_RS03425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SP_RS03430 PF00156 Phosphoribosyl transferase domain SP_RS03455 PF00005 ABC transporter SP_RS03460 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS03470 PF00005 ABC transporter SP_RS03475 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS03480 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS03485 PF01070 FMN-dependent dehydrogenase SP_RS03490 PF00152 tRNA synthetases class II (D, K and N) SP_RS03490 PF01336 OB-fold nucleic acid binding domain SP_RS03500 PF01070 FMN-dependent dehydrogenase SP_RS03510 PF02110 Hydroxyethylthiazole kinase family SP_RS03515 PF02581 Thiamine monophosphate synthase SP_RS03525 PF00005 ABC transporter SP_RS03535 PF03070 TENA/THI-4/PQQC family SP_RS03545 PF02110 Hydroxyethylthiazole kinase family SP_RS03550 PF02581 Thiamine monophosphate synthase SP_RS03555 PF08543 Phosphomethylpyrimidine kinase SP_RS03560 PF03965 Penicillinase repressor SP_RS03570 PF00403 Heavy-metal-associated domain SP_RS03575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SP_RS03575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SP_RS03575 PF00205 Thiamine pyrophosphate enzyme, central domain SP_RS03585 PF13358 DDE superfamily endonuclease SP_RS03600 PF00232 Glycosyl hydrolase family 1 SP_RS03605 PF01238 Phosphomannose isomerase type I SP_RS03610 PF00209 Sodium:neurotransmitter symporter family SP_RS03620 PF07739 TipAS antibiotic-recognition domain SP_RS03620 PF13411 MerR HTH family regulatory protein SP_RS03625 PF00293 NUDIX domain SP_RS03625 PF13344 Haloacid dehalogenase-like hydrolase SP_RS03635 PF02645 Uncharacterised protein, DegV family COG1307 SP_RS03645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SP_RS03655 PF00574 Clp protease SP_RS03660 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SP_RS03665 PF13458 Periplasmic binding protein SP_RS03670 PF02653 Branched-chain amino acid transport system / permease component SP_RS03675 PF11862 Domain of unknown function (DUF3382) SP_RS03675 PF02653 Branched-chain amino acid transport system / permease component SP_RS03680 PF00005 ABC transporter SP_RS03680 PF12399 Branched-chain amino acid ATP-binding cassette transporter SP_RS03685 PF00005 ABC transporter SP_RS03690 PF00571 CBS domain SP_RS03690 PF01743 Poly A polymerase head domain SP_RS03695 PF03462 PCRF domain SP_RS03695 PF00472 RF-1 domain SP_RS03700 PF00005 ABC transporter SP_RS03705 PF02687 FtsX-like permease family SP_RS03705 PF18075 FtsX extracellular domain SP_RS03710 PF02378 Phosphotransferase system, EIIC SP_RS03710 PF00367 phosphotransferase system, EIIB SP_RS03710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP_RS03715 PF03372 Endonuclease/Exonuclease/phosphatase family SP_RS03720 PF00270 DEAD/DEAH box helicase SP_RS03720 PF00271 Helicase conserved C-terminal domain SP_RS03725 PF00438 S-adenosylmethionine synthetase, N-terminal domain SP_RS03725 PF02772 S-adenosylmethionine synthetase, central domain SP_RS03725 PF02773 S-adenosylmethionine synthetase, C-terminal domain SP_RS03730 PF01180 Dihydroorotate dehydrogenase SP_RS03740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SP_RS03740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SP_RS03745 PF06265 Protein of unknown function (DUF1027) SP_RS03750 PF04055 Radical SAM superfamily SP_RS03760 PF12848 ABC transporter SP_RS03760 PF00005 ABC transporter SP_RS03765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SP_RS03780 PF00886 Ribosomal protein S16 SP_RS03795 PF05239 PRC-barrel domain SP_RS03795 PF01782 RimM N-terminal domain SP_RS03800 PF01746 tRNA (Guanine-1)-methyltransferase SP_RS03805 PF03477 ATP cone domain SP_RS03805 PF13597 Anaerobic ribonucleoside-triphosphate reductase SP_RS03815 PF02229 Transcriptional Coactivator p15 (PC4) SP_RS03825 PF02632 BioY family SP_RS03830 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP_RS03830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP_RS03835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SP_RS03840 PF00005 ABC transporter SP_RS03845 PF12704 MacB-like periplasmic core domain SP_RS03845 PF02687 FtsX-like permease family SP_RS03850 PF09334 tRNA synthetases class I (M) SP_RS03850 PF01588 Putative tRNA binding domain SP_RS03870 PF00248 Aldo/keto reductase family SP_RS03900 PF11838 ERAP1-like C-terminal domain SP_RS03900 PF01433 Peptidase family M1 domain SP_RS03905 PF00072 Response regulator receiver domain SP_RS03905 PF00486 Transcriptional regulatory protein, C terminal SP_RS03910 PF00512 His Kinase A (phospho-acceptor) domain SP_RS03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS03930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SP_RS03930 PF14579 Helix-hairpin-helix motif SP_RS03930 PF02811 PHP domain SP_RS03930 PF11490 DNA polymerase III polC-type N-terminus II SP_RS03930 PF07733 Bacterial DNA polymerase III alpha NTPase domain SP_RS03930 PF00929 Exonuclease SP_RS03935 PF01098 Cell cycle protein SP_RS03940 PF01965 DJ-1/PfpI family SP_RS03950 PF00204 DNA gyrase B SP_RS03950 PF01751 Toprim domain SP_RS03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS03950 PF00986 DNA gyrase B subunit, carboxyl terminus SP_RS03955 PF06160 Septation ring formation regulator, EzrA SP_RS03965 PF13358 DDE superfamily endonuclease SP_RS03990 PF13333 Integrase core domain SP_RS03990 PF00665 Integrase core domain SP_RS04015 PF07724 AAA domain (Cdc48 subfamily) SP_RS04015 PF00004 ATPase family associated with various cellular activities (AAA) SP_RS04015 PF10431 C-terminal, D2-small domain, of ClpB protein SP_RS04015 PF17871 AAA lid domain SP_RS04020 PF08796 Protein of unknown function (DUF1797) SP_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS04030 PF00005 ABC transporter SP_RS04035 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SP_RS04035 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SP_RS04050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SP_RS04055 PF01676 Metalloenzyme superfamily SP_RS04065 PF01048 Phosphorylase superfamily SP_RS04075 PF01289 Thiol-activated cytolysin SP_RS04075 PF17440 Thiol-activated cytolysin beta sandwich domain SP_RS04085 PF01048 Phosphorylase superfamily SP_RS04090 PF13683 Integrase core domain SP_RS04090 PF01610 Transposase SP_RS04100 PF01649 Ribosomal protein S20 SP_RS04105 PF00485 Phosphoribulokinase / Uridine kinase family SP_RS04115 PF05175 Methyltransferase small domain SP_RS04120 PF00591 Glycosyl transferase family, a/b domain SP_RS04120 PF02885 Glycosyl transferase family, helical bundle domain SP_RS04120 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SP_RS04125 PF01791 DeoC/LacD family aldolase SP_RS04130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SP_RS04135 PF02608 ABC transporter substrate-binding protein PnrA-like SP_RS04140 PF00005 ABC transporter SP_RS04145 PF02653 Branched-chain amino acid transport system / permease component SP_RS04150 PF02653 Branched-chain amino acid transport system / permease component SP_RS04165 PF13333 Integrase core domain SP_RS04165 PF00665 Integrase core domain SP_RS04165 PF13276 HTH-like domain SP_RS04170 PF13333 Integrase core domain SP_RS04170 PF00665 Integrase core domain SP_RS04175 PF02660 Glycerol-3-phosphate acyltransferase SP_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS04180 PF00986 DNA gyrase B subunit, carboxyl terminus SP_RS04180 PF00204 DNA gyrase B SP_RS04180 PF01751 Toprim domain SP_RS04190 PF00521 DNA gyrase/topoisomerase IV, subunit A SP_RS04190 PF03989 DNA gyrase C-terminal domain, beta-propeller SP_RS04195 PF01063 Amino-transferase class IV SP_RS04200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SP_RS04215 PF01470 Pyroglutamyl peptidase SP_RS04235 PF00575 S1 RNA binding domain SP_RS04240 PF01610 Transposase SP_RS04240 PF13683 Integrase core domain SP_RS04255 PF13185 GAF domain SP_RS04260 PF12169 DNA polymerase III subunits gamma and tau domain III SP_RS04270 PF00005 ABC transporter SP_RS04275 PF01458 Uncharacterized protein family (UPF0051) SP_RS04280 PF00266 Aminotransferase class-V SP_RS04285 PF01592 NifU-like N terminal domain SP_RS04290 PF01458 Uncharacterized protein family (UPF0051) SP_RS04300 PF00768 D-alanyl-D-alanine carboxypeptidase SP_RS04300 PF07943 Penicillin-binding protein 5, C-terminal domain SP_RS04305 PF01594 AI-2E family transporter SP_RS04315 PF08220 DeoR-like helix-turn-helix domain SP_RS04315 PF00455 DeoR C terminal sensor domain SP_RS04320 PF00294 pfkB family carbohydrate kinase SP_RS04325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP_RS04325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS04330 PF09397 Ftsk gamma domain SP_RS04330 PF01580 FtsK/SpoIIIE family SP_RS04330 PF17854 FtsK alpha domain SP_RS04340 PF00266 Aminotransferase class-V SP_RS04345 PF02568 Thiamine biosynthesis protein (ThiI) SP_RS04345 PF02926 THUMP domain SP_RS04370 PF02384 N-6 DNA Methylase SP_RS04390 PF02899 Phage integrase, N-terminal SAM-like domain SP_RS04390 PF00589 Phage integrase family SP_RS04400 PF04851 Type III restriction enzyme, res subunit SP_RS04400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SP_RS04400 PF00271 Helicase conserved C-terminal domain SP_RS04400 PF08463 EcoEI R protein C-terminal SP_RS04405 PF02863 Arginine repressor, C-terminal domain SP_RS04405 PF01316 Arginine repressor, DNA binding domain SP_RS04410 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SP_RS04410 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SP_RS04410 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SP_RS04415 PF07733 Bacterial DNA polymerase III alpha NTPase domain SP_RS04415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SP_RS04415 PF01336 OB-fold nucleic acid binding domain SP_RS04415 PF14579 Helix-hairpin-helix motif SP_RS04415 PF02811 PHP domain SP_RS04420 PF00365 Phosphofructokinase SP_RS04425 PF02887 Pyruvate kinase, alpha/beta domain SP_RS04425 PF00224 Pyruvate kinase, barrel domain SP_RS04465 PF09323 Domain of unknown function (DUF1980) SP_RS04470 PF03773 Predicted permease SP_RS04480 PF08942 Domain of unknown function (DUF1919) SP_RS04485 PF00575 S1 RNA binding domain SP_RS04485 PF09371 Tex-like protein N-terminal domain SP_RS04485 PF17674 HHH domain SP_RS04485 PF16921 Tex protein YqgF-like domain SP_RS04490 PF17283 SprT-like zinc ribbon domain SP_RS04490 PF10263 SprT-like family SP_RS04505 PF00005 ABC transporter SP_RS04510 PF02687 FtsX-like permease family SP_RS04520 PF13936 Helix-turn-helix domain SP_RS04525 PF01276 Orn/Lys/Arg decarboxylase, major domain SP_RS04525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SP_RS04540 PF17284 Spermidine synthase tetramerisation domain SP_RS04545 PF03435 Saccharopine dehydrogenase NADP binding domain SP_RS04545 PF16653 Saccharopine dehydrogenase C-terminal domain SP_RS04550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SP_RS04555 PF04371 Porphyromonas-type peptidyl-arginine deiminase SP_RS04560 PF00795 Carbon-nitrogen hydrolase SP_RS04585 PF03466 LysR substrate binding domain SP_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SP_RS04590 PF01252 Signal peptidase (SPase) II SP_RS04595 PF00849 RNA pseudouridylate synthase SP_RS04595 PF01479 S4 domain SP_RS04605 PF00696 Amino acid kinase family SP_RS04605 PF01472 PUA domain SP_RS04610 PF00171 Aldehyde dehydrogenase family SP_RS04615 PF03807 NADP oxidoreductase coenzyme F420-dependent SP_RS04615 PF14748 Pyrroline-5-carboxylate reductase dimerisation SP_RS04620 PF02223 Thymidylate kinase SP_RS04625 PF09115 DNA polymerase III, delta subunit, C terminal SP_RS04630 PF06156 Initiation control protein YabA SP_RS04635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SP_RS04665 PF01134 Glucose inhibited division protein A SP_RS04670 PF00696 Amino acid kinase family SP_RS04675 PF01765 Ribosome recycling factor SP_RS04680 PF13509 S1 domain SP_RS04680 PF17783 CvfB-like winged helix domain SP_RS04685 PF06855 YozE SAM-like fold SP_RS04690 PF02562 PhoH-like protein SP_RS04715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SP_RS04715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SP_RS04720 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SP_RS04720 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SP_RS04725 PF13302 Acetyltransferase (GNAT) domain SP_RS04730 PF10531 SLBB domain SP_RS04735 PF03772 Competence protein SP_RS04735 PF13567 Domain of unknown function (DUF4131) SP_RS04735 PF00753 Metallo-beta-lactamase superfamily SP_RS04745 PF00005 ABC transporter SP_RS04755 PF05198 Translation initiation factor IF-3, N-terminal domain SP_RS04755 PF00707 Translation initiation factor IF-3, C-terminal domain SP_RS04760 PF01632 Ribosomal protein L35 SP_RS04765 PF00453 Ribosomal protein L20 SP_RS04770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SP_RS04775 PF00970 Oxidoreductase FAD-binding domain SP_RS04775 PF00175 Oxidoreductase NAD-binding domain SP_RS04775 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SP_RS04780 PF01180 Dihydroorotate dehydrogenase SP_RS04785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SP_RS04785 PF17890 Peptidoglycan hydrolase LytB WW-like domain SP_RS04785 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain SP_RS04785 PF01473 Putative cell wall binding repeat SP_RS04790 PF05670 NFACT protein RNA binding domain SP_RS04795 PF02130 Uncharacterized protein family UPF0054 SP_RS04800 PF01219 Prokaryotic diacylglycerol kinase SP_RS04805 PF07650 KH domain SP_RS04805 PF01926 50S ribosome-binding GTPase SP_RS04810 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SP_RS04810 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SP_RS04810 PF06827 Zinc finger found in FPG and IleRS SP_RS04815 PF01121 Dephospho-CoA kinase SP_RS04820 PF00083 Sugar (and other) transporter SP_RS04820 PF07690 Major Facilitator Superfamily SP_RS04825 PF00471 Ribosomal protein L33 SP_RS04835 PF00773 RNB domain SP_RS04835 PF08206 Ribonuclease B OB domain SP_RS04835 PF00575 S1 RNA binding domain SP_RS04835 PF17876 Cold shock domain SP_RS04840 PF01668 SmpB protein SP_RS04845 PF09313 Domain of unknown function (DUF1971) SP_RS04845 PF03848 Tellurite resistance protein TehB SP_RS04855 PF01432 Peptidase family M3 SP_RS04855 PF08439 Oligopeptidase F SP_RS04860 PF01596 O-methyltransferase SP_RS04865 PF13145 PPIC-type PPIASE domain SP_RS04870 PF00665 Integrase core domain SP_RS04870 PF13333 Integrase core domain SP_RS04870 PF13276 HTH-like domain SP_RS04885 PF04073 Aminoacyl-tRNA editing domain SP_RS04900 PF14602 Hexapeptide repeat of succinyl-transferase SP_RS04900 PF00132 Bacterial transferase hexapeptide (six repeats) SP_RS04900 PF00483 Nucleotidyl transferase SP_RS04905 PF00293 NUDIX domain SP_RS04915 PF01048 Phosphorylase superfamily SP_RS04920 PF08279 HTH domain SP_RS04920 PF04394 Protein of unknown function, DUF536 SP_RS04925 PF14579 Helix-hairpin-helix motif SP_RS04925 PF07733 Bacterial DNA polymerase III alpha NTPase domain SP_RS04925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SP_RS04925 PF02811 PHP domain SP_RS04925 PF00929 Exonuclease SP_RS04925 PF11490 DNA polymerase III polC-type N-terminus II SP_RS04930 PF03009 Glycerophosphoryl diester phosphodiesterase family SP_RS04955 PF02683 Cytochrome C biogenesis protein transmembrane region SP_RS04960 PF00578 AhpC/TSA family SP_RS04965 PF13520 Amino acid permease SP_RS04970 PF01297 Zinc-uptake complex component A periplasmic SP_RS04970 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SP_RS05000 PF07687 Peptidase dimerisation domain SP_RS05000 PF01546 Peptidase family M20/M25/M40 SP_RS05005 PF00762 Ferrochelatase SP_RS05010 PF01741 Large-conductance mechanosensitive channel, MscL SP_RS05020 PF06177 QueT transporter SP_RS05030 PF01118 Semialdehyde dehydrogenase, NAD binding domain SP_RS05030 PF02774 Semialdehyde dehydrogenase, dimerisation domain SP_RS05035 PF00701 Dihydrodipicolinate synthetase family SP_RS05045 PF10396 GTP-binding protein TrmE N-terminus SP_RS05045 PF01926 50S ribosome-binding GTPase SP_RS05045 PF12631 MnmE helical domain SP_RS05050 PF01361 Tautomerase enzyme SP_RS05055 PF00265 Thymidine kinase SP_RS05065 PF03462 PCRF domain SP_RS05065 PF00472 RF-1 domain SP_RS05070 PF05175 Methyltransferase small domain SP_RS05085 PF00464 Serine hydroxymethyltransferase SP_RS05105 PF05958 tRNA (Uracil-5-)-methyltransferase SP_RS05125 PF01032 FecCD transport family SP_RS05130 PF01032 FecCD transport family SP_RS05135 PF00005 ABC transporter SP_RS05150 PF00239 Resolvase, N terminal domain SP_RS05150 PF02796 Helix-turn-helix domain of resolvase SP_RS05175 PF00781 Diacylglycerol kinase catalytic domain SP_RS05195 PF01381 Helix-turn-helix SP_RS05200 PF06414 Zeta toxin SP_RS05225 PF03432 Relaxase/Mobilisation nuclease domain SP_RS05245 PF00069 Protein kinase domain SP_RS05250 PF00005 ABC transporter SP_RS05260 PF01797 Transposase IS200 like SP_RS05265 PF01381 Helix-turn-helix SP_RS05275 PF01098 Cell cycle protein SP_RS05280 PF00311 Phosphoenolpyruvate carboxylase SP_RS05295 PF00005 ABC transporter SP_RS05295 PF09383 NIL domain SP_RS05300 PF01807 CHC2 zinc finger SP_RS05300 PF08275 DNA primase catalytic core, N-terminal domain SP_RS05300 PF10410 DnaB-helicase binding domain of primase SP_RS05305 PF00140 Sigma-70 factor, region 1.2 SP_RS05305 PF04542 Sigma-70 region 2 SP_RS05305 PF04539 Sigma-70 region 3 SP_RS05305 PF04545 Sigma-70, region 4 SP_RS05305 PF03979 Sigma-70 factor, region 1.1 SP_RS05310 PF01883 Iron-sulfur cluster assembly protein SP_RS05315 PF00534 Glycosyl transferases group 1 SP_RS05315 PF13439 Glycosyltransferase Family 4 SP_RS05320 PF00534 Glycosyl transferases group 1 SP_RS05320 PF13439 Glycosyltransferase Family 4 SP_RS05335 PF01018 GTP1/OBG SP_RS05335 PF01926 50S ribosome-binding GTPase SP_RS05335 PF09269 Domain of unknown function (DUF1967) SP_RS05345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SP_RS05355 PF00571 CBS domain SP_RS05355 PF07085 DRTGG domain SP_RS05355 PF00392 Bacterial regulatory proteins, gntR family SP_RS05355 PF03061 Thioesterase superfamily SP_RS05360 PF00557 Metallopeptidase family M24 SP_RS05385 PF13361 UvrD-like helicase C-terminal domain SP_RS05385 PF00580 UvrD/REP helicase N-terminal domain SP_RS05390 PF04002 RadC-like JAB domain SP_RS05395 PF07722 Peptidase C26 SP_RS05400 PF06971 Putative DNA-binding protein N-terminus SP_RS05400 PF02629 CoA binding domain SP_RS05415 PF00266 Aminotransferase class-V SP_RS05420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SP_RS05420 PF14572 Phosphoribosyl synthetase-associated domain SP_RS05430 PF04607 Region found in RelA / SpoT proteins SP_RS05435 PF01513 ATP-NAD kinase SP_RS05440 PF00849 RNA pseudouridylate synthase SP_RS05445 PF01515 Phosphate acetyl/butaryl transferase SP_RS05450 PF01610 Transposase SP_RS05450 PF13683 Integrase core domain SP_RS05465 PF02575 YbaB/EbfC DNA-binding family SP_RS05475 PF00829 Ribosomal prokaryotic L21 protein SP_RS05485 PF01016 Ribosomal L27 protein SP_RS05495 PF06574 FAD synthetase SP_RS05495 PF01687 Riboflavin kinase SP_RS05500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SP_RS05500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SP_RS05505 PF02645 Uncharacterised protein, DegV family COG1307 SP_RS05510 PF00216 Bacterial DNA-binding protein SP_RS05515 PF00005 ABC transporter SP_RS05515 PF16326 ABC transporter C-terminal domain SP_RS05515 PF12848 ABC transporter SP_RS05530 PF00533 BRCA1 C Terminus (BRCT) domain SP_RS05530 PF03120 NAD-dependent DNA ligase OB-fold domain SP_RS05530 PF12826 Helix-hairpin-helix motif SP_RS05530 PF01653 NAD-dependent DNA ligase adenylation domain SP_RS05530 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SP_RS05535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SP_RS05535 PF00128 Alpha amylase, catalytic domain SP_RS05535 PF17999 Pullulanase N1-terminal domain SP_RS05545 PF00171 Aldehyde dehydrogenase family SP_RS05550 PF00128 Alpha amylase, catalytic domain SP_RS05550 PF02806 Alpha amylase, C-terminal all-beta domain SP_RS05550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SP_RS05555 PF00483 Nucleotidyl transferase SP_RS05560 PF00483 Nucleotidyl transferase SP_RS05565 PF00534 Glycosyl transferases group 1 SP_RS05565 PF08323 Starch synthase catalytic domain SP_RS05580 PF02595 Glycerate kinase family SP_RS05590 PF03952 Enolase, N-terminal domain SP_RS05590 PF00113 Enolase, C-terminal TIM barrel domain SP_RS05595 PF00589 Phage integrase family SP_RS05595 PF02899 Phage integrase, N-terminal SAM-like domain SP_RS05655 PF05973 Phage derived protein Gp49-like (DUF891) SP_RS05660 PF01381 Helix-turn-helix SP_RS05680 PF12705 PD-(D/E)XK nuclease superfamily SP_RS05685 PF13361 UvrD-like helicase C-terminal domain SP_RS05685 PF00580 UvrD/REP helicase N-terminal domain SP_RS05685 PF12705 PD-(D/E)XK nuclease superfamily SP_RS05695 PF07501 G5 domain SP_RS05695 PF04650 YSIRK type signal peptide SP_RS05695 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SP_RS05695 PF00746 LPXTG cell wall anchor motif SP_RS05695 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SP_RS05700 PF01926 50S ribosome-binding GTPase SP_RS05705 PF01351 Ribonuclease HII SP_RS05710 PF00654 Voltage gated chloride channel SP_RS05715 PF00589 Phage integrase family SP_RS05720 PF03099 Biotin/lipoate A/B protein ligase family SP_RS05720 PF10437 Bacterial lipoate protein ligase C-terminus SP_RS05725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP_RS05725 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP_RS05730 PF02817 e3 binding domain SP_RS05730 PF00364 Biotin-requiring enzyme SP_RS05730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SP_RS05735 PF02779 Transketolase, pyrimidine binding domain SP_RS05735 PF02780 Transketolase, C-terminal domain SP_RS05740 PF00676 Dehydrogenase E1 component SP_RS05745 PF01554 MatE SP_RS05755 PF01979 Amidohydrolase family SP_RS05760 PF00293 NUDIX domain SP_RS05765 PF03167 Uracil DNA glycosylase superfamily SP_RS05775 PF13419 Haloacid dehalogenase-like hydrolase SP_RS05780 PF03610 PTS system fructose IIA component SP_RS05795 PF02896 PEP-utilising enzyme, TIM barrel domain SP_RS05795 PF00391 PEP-utilising enzyme, mobile domain SP_RS05795 PF05524 PEP-utilising enzyme, N-terminal SP_RS05800 PF00381 PTS HPr component phosphorylation site SP_RS05805 PF00462 Glutaredoxin SP_RS05810 PF02867 Ribonucleotide reductase, barrel domain SP_RS05810 PF00317 Ribonucleotide reductase, all-alpha domain SP_RS05810 PF08343 Ribonucleotide reductase N-terminal SP_RS05815 PF00268 Ribonucleotide reductase, small chain SP_RS05820 PF00455 DeoR C terminal sensor domain SP_RS05820 PF08220 DeoR-like helix-turn-helix domain SP_RS05825 PF00232 Glycosyl hydrolase family 1 SP_RS05830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS05830 PF02378 Phosphotransferase system, EIIC SP_RS05835 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP_RS05840 PF00874 PRD domain SP_RS05840 PF03123 CAT RNA binding domain SP_RS05850 PF01791 DeoC/LacD family aldolase SP_RS05855 PF00294 pfkB family carbohydrate kinase SP_RS05860 PF02502 Ribose/Galactose Isomerase SP_RS05865 PF02502 Ribose/Galactose Isomerase SP_RS05870 PF01263 Aldose 1-epimerase SP_RS05895 PF03144 Elongation factor Tu domain 2 SP_RS05895 PF06421 GTP-binding protein LepA C-terminus SP_RS05895 PF00009 Elongation factor Tu GTP binding domain SP_RS05895 PF00679 Elongation factor G C-terminus SP_RS05900 PF00149 Calcineurin-like phosphoesterase SP_RS05905 PF13476 AAA domain SP_RS05910 PF01316 Arginine repressor, DNA binding domain SP_RS05910 PF02863 Arginine repressor, C-terminal domain SP_RS05915 PF01479 S4 domain SP_RS05915 PF01728 FtsJ-like methyltransferase SP_RS05920 PF00348 Polyprenyl synthetase SP_RS05925 PF02609 Exonuclease VII small subunit SP_RS05930 PF13742 OB-fold nucleic acid binding domain SP_RS05930 PF02601 Exonuclease VII, large subunit SP_RS05935 PF00485 Phosphoribulokinase / Uridine kinase family SP_RS05950 PF01509 TruB family pseudouridylate synthase (N terminal domain) SP_RS05950 PF16198 tRNA pseudouridylate synthase B C-terminal domain SP_RS05970 PF04203 Sortase domain SP_RS05975 PF00521 DNA gyrase/topoisomerase IV, subunit A SP_RS05975 PF03989 DNA gyrase C-terminal domain, beta-propeller SP_RS05980 PF00056 lactate/malate dehydrogenase, NAD binding domain SP_RS05980 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SP_RS05990 PF07669 Eco57I restriction-modification methylase SP_RS06005 PF00753 Metallo-beta-lactamase superfamily SP_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS06010 PF00512 His Kinase A (phospho-acceptor) domain SP_RS06010 PF00672 HAMP domain SP_RS06010 PF13426 PAS domain SP_RS06015 PF00072 Response regulator receiver domain SP_RS06015 PF00486 Transcriptional regulatory protein, C terminal SP_RS06020 PF00730 HhH-GPD superfamily base excision DNA repair protein SP_RS06020 PF14815 NUDIX domain SP_RS06025 PF01268 Formate--tetrahydrofolate ligase SP_RS06035 PF02441 Flavoprotein SP_RS06040 PF12822 ECF transporter, substrate-specific component SP_RS06050 PF02829 3H domain SP_RS06050 PF08279 HTH domain SP_RS06070 PF17757 UvrB interaction domain SP_RS06070 PF00271 Helicase conserved C-terminal domain SP_RS06070 PF04851 Type III restriction enzyme, res subunit SP_RS06070 PF12344 Ultra-violet resistance protein B SP_RS06070 PF02151 UvrB/uvrC motif SP_RS06080 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS06085 PF00005 ABC transporter SP_RS06090 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SP_RS06090 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SP_RS06095 PF00448 SRP54-type protein, GTPase domain SP_RS06095 PF02881 SRP54-type protein, helical bundle domain SP_RS06110 PF06470 SMC proteins Flexible Hinge Domain SP_RS06110 PF02463 RecF/RecN/SMC N terminal domain SP_RS06115 PF14622 Ribonuclease-III-like SP_RS06115 PF00035 Double-stranded RNA binding motif SP_RS06125 PF00478 IMP dehydrogenase / GMP reductase domain SP_RS06135 PF12102 Domain of unknown function (DUF3578) SP_RS06135 PF07728 AAA domain (dynein-related subfamily) SP_RS06150 PF00694 Aconitase C-terminal domain SP_RS06160 PF00180 Isocitrate/isopropylmalate dehydrogenase SP_RS06165 PF00180 Isocitrate/isopropylmalate dehydrogenase SP_RS06170 PF08502 LeuA allosteric (dimerisation) domain SP_RS06170 PF00682 HMGL-like SP_RS06180 PF03932 CutC family SP_RS06185 PF04304 Protein of unknown function (DUF454) SP_RS06190 PF01610 Transposase SP_RS06190 PF13683 Integrase core domain SP_RS06195 PF01751 Toprim domain SP_RS06195 PF01131 DNA topoisomerase SP_RS06195 PF01396 Topoisomerase DNA binding C4 zinc finger SP_RS06205 PF18255 DNA processing protein A sterile alpha motif domain SP_RS06205 PF02481 DNA recombination-mediator protein A SP_RS06210 PF12804 MobA-like NTP transferase domain SP_RS06225 PF08240 Alcohol dehydrogenase GroES-like domain SP_RS06230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SP_RS06240 PF04991 LicD family SP_RS06245 PF04991 LicD family SP_RS06250 PF02142 MGS-like domain SP_RS06250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SP_RS06250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SP_RS06255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SP_RS06255 PF00117 Glutamine amidotransferase class-I SP_RS06260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SP_RS06260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SP_RS06265 PF00156 Phosphoribosyl transferase domain SP_RS06270 PF00730 HhH-GPD superfamily base excision DNA repair protein SP_RS06270 PF00633 Helix-hairpin-helix motif SP_RS06270 PF10576 Iron-sulfur binding domain of endonuclease III SP_RS06285 PF12848 ABC transporter SP_RS06285 PF16326 ABC transporter C-terminal domain SP_RS06285 PF00005 ABC transporter SP_RS06290 PF01435 Peptidase family M48 SP_RS06295 PF04011 LemA family SP_RS06300 PF02527 rRNA small subunit methyltransferase G SP_RS06305 PF00860 Permease family SP_RS06310 PF02978 Signal peptide binding domain SP_RS06310 PF02881 SRP54-type protein, helical bundle domain SP_RS06310 PF00448 SRP54-type protein, GTPase domain SP_RS06315 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SP_RS06325 PF01966 HD domain SP_RS06345 PF01245 Ribosomal protein L19 SP_RS06350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SP_RS06355 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SP_RS06360 PF00800 Prephenate dehydratase SP_RS06360 PF01817 Chorismate mutase type II SP_RS06360 PF01842 ACT domain SP_RS06365 PF00258 Flavodoxin SP_RS06370 PF02272 DHHA1 domain SP_RS06370 PF01368 DHH family SP_RS06375 PF01197 Ribosomal protein L31 SP_RS06390 PF13358 DDE superfamily endonuclease SP_RS06400 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SP_RS06400 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SP_RS06410 PF00005 ABC transporter SP_RS06410 PF03412 Peptidase C39 family SP_RS06410 PF00664 ABC transporter transmembrane region SP_RS06455 PF01813 ATP synthase subunit D SP_RS06460 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP_RS06460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP_RS06465 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP_RS06465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP_RS06465 PF16886 ATPsynthase alpha/beta subunit N-term extension SP_RS06470 PF01990 ATP synthase (F/14-kDa) subunit SP_RS06485 PF00137 ATP synthase subunit C SP_RS06490 PF01496 V-type ATPase 116kDa subunit family SP_RS06500 PF00480 ROK family SP_RS06505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SP_RS06505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SP_RS06510 PF13088 BNR repeat-like domain SP_RS06510 PF02012 BNR/Asp-box repeat SP_RS06510 PF02973 Sialidase, N-terminal domain SP_RS06520 PF00474 Sodium:solute symporter family SP_RS06525 PF00701 Dihydrodipicolinate synthetase family SP_RS06530 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SP_RS06535 PF01418 Helix-turn-helix domain, rpiR family SP_RS06535 PF01380 SIS domain SP_RS06560 PF00145 C-5 cytosine-specific DNA methylase SP_RS06580 PF00005 ABC transporter SP_RS06580 PF02687 FtsX-like permease family SP_RS06580 PF12704 MacB-like periplasmic core domain SP_RS06590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SP_RS06590 PF00326 Prolyl oligopeptidase family SP_RS06595 PF00069 Protein kinase domain SP_RS06625 PF00542 Ribosomal protein L7/L12 C-terminal domain SP_RS06625 PF16320 Ribosomal protein L7/L12 dimerisation domain SP_RS06630 PF00466 Ribosomal protein L10 SP_RS06635 PF01979 Amidohydrolase family SP_RS06640 PF00005 ABC transporter SP_RS06640 PF00664 ABC transporter transmembrane region SP_RS06645 PF00664 ABC transporter transmembrane region SP_RS06645 PF00005 ABC transporter SP_RS06650 PF01625 Peptide methionine sulfoxide reductase SP_RS06650 PF01641 SelR domain SP_RS06660 PF00288 GHMP kinases N terminal domain SP_RS06660 PF08544 GHMP kinases C terminal SP_RS06665 PF03447 Homoserine dehydrogenase, NAD binding domain SP_RS06665 PF00742 Homoserine dehydrogenase SP_RS06670 PF05389 Negative regulator of genetic competence (MecA) SP_RS06685 PF00535 Glycosyl transferase family 2 SP_RS06690 PF13439 Glycosyltransferase Family 4 SP_RS06690 PF00534 Glycosyl transferases group 1 SP_RS06695 PF04991 LicD family SP_RS06705 PF03816 Cell envelope-related transcriptional attenuator domain SP_RS06710 PF00800 Prephenate dehydratase SP_RS06715 PF01202 Shikimate kinase SP_RS06720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SP_RS06725 PF06133 Control of competence regulator ComK, YlbF/YmcA SP_RS06730 PF02153 Prephenate dehydrogenase SP_RS06735 PF01264 Chorismate synthase SP_RS06740 PF01761 3-dehydroquinate synthase SP_RS06745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SP_RS06745 PF08501 Shikimate dehydrogenase substrate binding domain SP_RS06750 PF01487 Type I 3-dehydroquinase SP_RS06755 PF10672 S-adenosylmethionine-dependent methyltransferase SP_RS06755 PF17785 PUA-like domain SP_RS06770 PF00005 ABC transporter SP_RS06775 PF09154 Domain of unknown function (DUF1939) SP_RS06775 PF00128 Alpha amylase, catalytic domain SP_RS06780 PF01411 tRNA synthetases class II (A) SP_RS06780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SP_RS06780 PF02272 DHHA1 domain SP_RS06795 PF13416 Bacterial extracellular solute-binding protein SP_RS06800 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS06810 PF00005 ABC transporter SP_RS06810 PF08402 TOBE domain SP_RS06815 PF01565 FAD binding domain SP_RS06815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SP_RS06825 PF03306 Alpha-acetolactate decarboxylase SP_RS06830 PF00392 Bacterial regulatory proteins, gntR family SP_RS06830 PF00155 Aminotransferase class I and II SP_RS06835 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS06840 PF01895 PhoU domain SP_RS06845 PF00005 ABC transporter SP_RS06850 PF00005 ABC transporter SP_RS06855 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS06860 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS06865 PF12849 PBP superfamily domain SP_RS06870 PF01189 16S rRNA methyltransferase RsmB/F SP_RS06870 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SP_RS06870 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SP_RS06875 PF00459 Inositol monophosphatase family SP_RS06880 PF05256 Uncharacterised protein family (UPF0223) SP_RS06885 PF03960 ArsC family SP_RS06895 PF13344 Haloacid dehalogenase-like hydrolase SP_RS06905 PF04055 Radical SAM superfamily SP_RS06905 PF06969 HemN C-terminal domain SP_RS06920 PF01790 Prolipoprotein diacylglyceryl transferase SP_RS06925 PF07475 HPr Serine kinase C-terminal domain SP_RS06925 PF02603 HPr Serine kinase N terminus SP_RS06930 PF01165 Ribosomal protein S21 SP_RS06935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SP_RS06940 PF02547 Queuosine biosynthesis protein SP_RS06965 PF02540 NAD synthase SP_RS06970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SP_RS06970 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SP_RS06970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SP_RS06980 PF01381 Helix-turn-helix SP_RS06995 PF00005 ABC transporter SP_RS07010 PF16325 Peptidase family U32 C-terminal domain SP_RS07010 PF01136 Peptidase family U32 SP_RS07025 PF01555 DNA methylase SP_RS07025 PF18755 Restriction Enzyme Adenine Methylase Associated SP_RS07035 PF00005 ABC transporter SP_RS07035 PF00664 ABC transporter transmembrane region SP_RS07040 PF00664 ABC transporter transmembrane region SP_RS07040 PF00005 ABC transporter SP_RS07055 PF00005 ABC transporter SP_RS07065 PF00005 ABC transporter SP_RS07070 PF03050 Transposase IS66 family SP_RS07070 PF13007 Transposase C of IS166 homeodomain SP_RS07070 PF13005 zinc-finger binding domain of transposase IS66 SP_RS07070 PF13817 IS66 C-terminal element SP_RS07095 PF01610 Transposase SP_RS07095 PF13683 Integrase core domain SP_RS07100 PF00117 Glutamine amidotransferase class-I SP_RS07100 PF00958 GMP synthase C terminal domain SP_RS07100 PF02540 NAD synthase SP_RS07105 PF07702 UTRA domain SP_RS07105 PF00392 Bacterial regulatory proteins, gntR family SP_RS07110 PF00892 EamA-like transporter family SP_RS07115 PF00144 Beta-lactamase SP_RS07140 PF09587 Bacterial capsule synthesis protein PGA_cap SP_RS07155 PF01327 Polypeptide deformylase SP_RS07160 PF08032 RNA 2'-O ribose methyltransferase substrate binding SP_RS07160 PF00588 SpoU rRNA Methylase family SP_RS07165 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP_RS07175 PF00005 ABC transporter SP_RS07180 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS07185 PF03960 ArsC family SP_RS07190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SP_RS07190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SP_RS07205 PF03006 Haemolysin-III related SP_RS07210 PF01174 SNO glutamine amidotransferase family SP_RS07215 PF01680 SOR/SNZ family SP_RS07220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP_RS07220 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP_RS07225 PF02424 ApbE family SP_RS07230 PF03358 NADPH-dependent FMN reductase SP_RS07230 PF00890 FAD binding domain SP_RS07230 PF04205 FMN-binding domain SP_RS07235 PF00890 FAD binding domain SP_RS07235 PF04205 FMN-binding domain SP_RS07235 PF03358 NADPH-dependent FMN reductase SP_RS07240 PF05979 Bacterial protein of unknown function (DUF896) SP_RS07245 PF02092 Glycyl-tRNA synthetase beta subunit SP_RS07250 PF02091 Glycyl-tRNA synthetase alpha subunit SP_RS07260 PF00248 Aldo/keto reductase family SP_RS07265 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SP_RS07265 PF01522 Polysaccharide deacetylase SP_RS07280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SP_RS07280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SP_RS07285 PF00270 DEAD/DEAH box helicase SP_RS07285 PF00271 Helicase conserved C-terminal domain SP_RS07295 PF13358 DDE superfamily endonuclease SP_RS07300 PF00665 Integrase core domain SP_RS07300 PF13333 Integrase core domain SP_RS07325 PF00009 Elongation factor Tu GTP binding domain SP_RS07325 PF03144 Elongation factor Tu domain 2 SP_RS07325 PF03143 Elongation factor Tu C-terminal domain SP_RS07340 PF00230 Major intrinsic protein SP_RS07375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SP_RS07375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SP_RS07375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SP_RS07375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SP_RS07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP_RS07390 PF00005 ABC transporter SP_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS07410 PF01594 AI-2E family transporter SP_RS07415 PF10282 Lactonase, 7-bladed beta-propeller SP_RS07420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SP_RS07420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SP_RS07425 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP_RS07425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP_RS07430 PF00231 ATP synthase SP_RS07435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP_RS07435 PF00306 ATP synthase alpha/beta chain, C terminal domain SP_RS07435 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP_RS07440 PF00213 ATP synthase delta (OSCP) subunit SP_RS07445 PF00430 ATP synthase B/B' CF(0) SP_RS07450 PF00119 ATP synthase A chain SP_RS07455 PF00137 ATP synthase subunit C SP_RS07465 PF00583 Acetyltransferase (GNAT) family SP_RS07470 PF03449 Transcription elongation factor, N-terminal SP_RS07470 PF01272 Transcription elongation factor, GreA/GreB, C-term SP_RS07475 PF02618 YceG-like family SP_RS07490 PF01225 Mur ligase family, catalytic domain SP_RS07490 PF02875 Mur ligase family, glutamate ligase domain SP_RS07490 PF08245 Mur ligase middle domain SP_RS07500 PF00176 SNF2 family N-terminal domain SP_RS07500 PF00271 Helicase conserved C-terminal domain SP_RS07500 PF12419 SNF2 Helicase protein SP_RS07505 PF00155 Aminotransferase class I and II SP_RS07510 PF01053 Cys/Met metabolism PLP-dependent enzyme SP_RS07515 PF00005 ABC transporter SP_RS07515 PF00664 ABC transporter transmembrane region SP_RS07520 PF00664 ABC transporter transmembrane region SP_RS07520 PF00005 ABC transporter SP_RS07525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SP_RS07530 PF01943 Polysaccharide biosynthesis protein SP_RS07530 PF14667 Polysaccharide biosynthesis C-terminal domain SP_RS07535 PF08245 Mur ligase middle domain SP_RS07535 PF02875 Mur ligase family, glutamate ligase domain SP_RS07540 PF05532 CsbD-like SP_RS07555 PF02833 DHHA2 domain SP_RS07555 PF01368 DHH family SP_RS07560 PF01541 GIY-YIG catalytic domain SP_RS07565 PF05175 Methyltransferase small domain SP_RS07570 PF00575 S1 RNA binding domain SP_RS07575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SP_RS07580 PF01084 Ribosomal protein S18 SP_RS07585 PF00436 Single-strand binding protein family SP_RS07590 PF01250 Ribosomal protein S6 SP_RS07595 PF01336 OB-fold nucleic acid binding domain SP_RS07595 PF00152 tRNA synthetases class II (D, K and N) SP_RS07605 PF00155 Aminotransferase class I and II SP_RS07620 PF03358 NADPH-dependent FMN reductase SP_RS07625 PF03883 Peroxide stress protein YaaA SP_RS07640 PF01327 Polypeptide deformylase SP_RS07645 PF02798 Glutathione S-transferase, N-terminal domain SP_RS07650 PF00690 Cation transporter/ATPase, N-terminus SP_RS07650 PF00689 Cation transporting ATPase, C-terminus SP_RS07655 PF16916 Dimerisation domain of Zinc Transporter SP_RS07655 PF01545 Cation efflux family SP_RS07660 PF12848 ABC transporter SP_RS07660 PF00005 ABC transporter SP_RS07660 PF16326 ABC transporter C-terminal domain SP_RS07665 PF12627 Probable RNA and SrmB- binding site of polymerase A SP_RS07665 PF13735 tRNA nucleotidyltransferase domain 2 putative SP_RS07665 PF01743 Poly A polymerase head domain SP_RS07670 PF05173 Dihydrodipicolinate reductase, C-terminus SP_RS07670 PF01113 Dihydrodipicolinate reductase, N-terminus SP_RS07675 PF02645 Uncharacterised protein, DegV family COG1307 SP_RS07685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SP_RS07685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SP_RS07685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SP_RS07685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SP_RS07695 PF02457 DisA bacterial checkpoint controller nucleotide-binding SP_RS07705 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP_RS07710 PF02650 WhiA C-terminal HTH domain SP_RS07710 PF14527 WhiA LAGLIDADG-like domain SP_RS07710 PF10298 WhiA N-terminal LAGLIDADG-like domain SP_RS07715 PF01933 Uncharacterised protein family UPF0052 SP_RS07720 PF03668 P-loop ATPase protein family SP_RS07725 PF01042 Endoribonuclease L-PSP SP_RS07730 PF01926 50S ribosome-binding GTPase SP_RS07735 PF07724 AAA domain (Cdc48 subfamily) SP_RS07735 PF06689 ClpX C4-type zinc finger SP_RS07735 PF10431 C-terminal, D2-small domain, of ClpB protein SP_RS07745 PF00186 Dihydrofolate reductase SP_RS07750 PF00210 Ferritin-like domain SP_RS07755 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain SP_RS07755 PF17890 Peptidoglycan hydrolase LytB WW-like domain SP_RS07755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SP_RS07755 PF01473 Putative cell wall binding repeat SP_RS07760 PF00121 Triosephosphate isomerase SP_RS07765 PF07261 Replication initiation and membrane attachment SP_RS07770 PF04204 Homoserine O-succinyltransferase SP_RS07775 PF00156 Phosphoribosyl transferase domain SP_RS07780 PF13649 Methyltransferase domain SP_RS07790 PF00005 ABC transporter SP_RS07790 PF03459 TOBE domain SP_RS07790 PF17912 MalK OB fold domain SP_RS07795 PF01610 Transposase SP_RS07795 PF13683 Integrase core domain SP_RS07805 PF00857 Isochorismatase family SP_RS07810 PF08222 CodY helix-turn-helix domain SP_RS07810 PF06018 CodY GAF-like domain SP_RS07815 PF00270 DEAD/DEAH box helicase SP_RS07815 PF00271 Helicase conserved C-terminal domain SP_RS07820 PF07690 Major Facilitator Superfamily SP_RS07825 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP_RS07825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP_RS07830 PF08245 Mur ligase middle domain SP_RS07830 PF08353 Domain of unknown function (DUF1727) SP_RS07835 PF07685 CobB/CobQ-like glutamine amidotransferase domain SP_RS07840 PF00557 Metallopeptidase family M24 SP_RS07840 PF01321 Creatinase/Prolidase N-terminal domain SP_RS07845 PF00665 Integrase core domain SP_RS07845 PF13333 Integrase core domain SP_RS07850 PF13333 Integrase core domain SP_RS07850 PF00665 Integrase core domain SP_RS07850 PF13276 HTH-like domain SP_RS07870 PF07155 ECF-type riboflavin transporter, S component SP_RS07875 PF08543 Phosphomethylpyrimidine kinase SP_RS07880 PF01416 tRNA pseudouridine synthase SP_RS07900 PF03831 PhnA domain SP_RS07900 PF08274 PhnA Zinc-Ribbon SP_RS07905 PF02224 Cytidylate kinase SP_RS07920 PF00535 Glycosyl transferase family 2 SP_RS07925 PF16363 GDP-mannose 4,6 dehydratase SP_RS07930 PF01266 FAD dependent oxidoreductase SP_RS07935 PF01784 NIF3 (NGG1p interacting factor 3) SP_RS07940 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SP_RS07950 PF13333 Integrase core domain SP_RS07950 PF00665 Integrase core domain SP_RS07955 PF13333 Integrase core domain SP_RS07955 PF13276 HTH-like domain SP_RS07955 PF00665 Integrase core domain SP_RS07965 PF02780 Transketolase, C-terminal domain SP_RS07965 PF00456 Transketolase, thiamine diphosphate binding domain SP_RS07965 PF02779 Transketolase, pyrimidine binding domain SP_RS07970 PF00834 Ribulose-phosphate 3 epimerase family SP_RS07975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS07975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP_RS07980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS08000 PF01797 Transposase IS200 like SP_RS08010 PF01553 Acyltransferase SP_RS08020 PF00312 Ribosomal protein S15 SP_RS08025 PF13460 NAD(P)H-binding SP_RS08040 PF02824 TGS domain SP_RS08040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SP_RS08040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SP_RS08040 PF03129 Anticodon binding domain SP_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS08050 PF00072 Response regulator receiver domain SP_RS08050 PF00486 Transcriptional regulatory protein, C terminal SP_RS08065 PF02082 Transcriptional regulator SP_RS08080 PF01610 Transposase SP_RS08080 PF13683 Integrase core domain SP_RS08105 PF02580 D-Tyr-tRNA(Tyr) deacylase SP_RS08110 PF13291 ACT domain SP_RS08110 PF04607 Region found in RelA / SpoT proteins SP_RS08110 PF02824 TGS domain SP_RS08125 PF00753 Metallo-beta-lactamase superfamily SP_RS08130 PF05649 Peptidase family M13 SP_RS08130 PF01431 Peptidase family M13 SP_RS08135 PF00005 ABC transporter SP_RS08140 PF00950 ABC 3 transport family SP_RS08145 PF01297 Zinc-uptake complex component A periplasmic SP_RS08150 PF08534 Redoxin SP_RS08160 PF00005 ABC transporter SP_RS08160 PF12704 MacB-like periplasmic core domain SP_RS08160 PF02687 FtsX-like permease family SP_RS08170 PF00300 Histidine phosphatase superfamily (branch 1) SP_RS08190 PF08264 Anticodon-binding domain of tRNA SP_RS08190 PF06827 Zinc finger found in FPG and IleRS SP_RS08190 PF00133 tRNA synthetases class I (I, L, M and V) SP_RS08205 PF05103 DivIVA protein SP_RS08220 PF04472 Cell division protein SepF SP_RS08225 PF01168 Alanine racemase, N-terminal domain SP_RS08230 PF00091 Tubulin/FtsZ family, GTPase domain SP_RS08230 PF12327 FtsZ family, C-terminal domain SP_RS08235 PF11983 Membrane-attachment and polymerisation-promoting switch SP_RS08235 PF02491 SHS2 domain inserted in FTSA SP_RS08245 PF00293 NUDIX domain SP_RS08250 PF08245 Mur ligase middle domain SP_RS08250 PF01225 Mur ligase family, catalytic domain SP_RS08250 PF02875 Mur ligase family, glutamate ligase domain SP_RS08255 PF01820 D-ala D-ala ligase N-terminus SP_RS08255 PF07478 D-ala D-ala ligase C-terminus SP_RS08260 PF13662 Toprim domain SP_RS08260 PF02132 RecR protein SP_RS08265 PF03717 Penicillin-binding Protein dimerisation domain SP_RS08265 PF00905 Penicillin binding protein transpeptidase domain SP_RS08275 PF00480 ROK family SP_RS08280 PF00701 Dihydrodipicolinate synthetase family SP_RS08300 PF04074 YhcH/YjgK/YiaL SP_RS08305 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS08320 PF00367 phosphotransferase system, EIIB SP_RS08320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP_RS08320 PF02378 Phosphotransferase system, EIIC SP_RS08325 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SP_RS08330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SP_RS08330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SP_RS08335 PF13088 BNR repeat-like domain SP_RS08335 PF02012 BNR/Asp-box repeat SP_RS08335 PF02973 Sialidase, N-terminal domain SP_RS08340 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS08350 PF01547 Bacterial extracellular solute-binding protein SP_RS08360 PF01610 Transposase SP_RS08360 PF13683 Integrase core domain SP_RS08380 PF05448 Acetyl xylan esterase (AXE1) SP_RS08390 PF00271 Helicase conserved C-terminal domain SP_RS08390 PF00270 DEAD/DEAH box helicase SP_RS08390 PF17191 RecG wedge domain SP_RS08395 PF00842 Alanine racemase, C-terminal domain SP_RS08395 PF01168 Alanine racemase, N-terminal domain SP_RS08400 PF01648 4'-phosphopantetheinyl transferase superfamily SP_RS08405 PF00793 DAHP synthetase I family SP_RS08410 PF00793 DAHP synthetase I family SP_RS08415 PF07517 SecA DEAD-like domain SP_RS08415 PF01043 SecA preprotein cross-linking domain SP_RS08415 PF02810 SEC-C motif SP_RS08415 PF07516 SecA Wing and Scaffold domain SP_RS08425 PF00005 ABC transporter SP_RS08450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SP_RS08450 PF01926 50S ribosome-binding GTPase SP_RS08455 PF00881 Nitroreductase family SP_RS08460 PF07319 Primosomal protein DnaI N-terminus SP_RS08460 PF01695 IstB-like ATP binding protein SP_RS08470 PF03477 ATP cone domain SP_RS08475 PF00392 Bacterial regulatory proteins, gntR family SP_RS08480 PF00005 ABC transporter SP_RS08495 PF00005 ABC transporter SP_RS08495 PF13732 Domain of unknown function (DUF4162) SP_RS08515 PF00480 ROK family SP_RS08520 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP_RS08520 PF00367 phosphotransferase system, EIIB SP_RS08520 PF02378 Phosphotransferase system, EIIC SP_RS08530 PF00251 Glycosyl hydrolases family 32 N-terminal domain SP_RS08530 PF08244 Glycosyl hydrolases family 32 C terminal SP_RS08535 PF00356 Bacterial regulatory proteins, lacI family SP_RS08540 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SP_RS08545 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SP_RS08545 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SP_RS08570 PF03793 PASTA domain SP_RS08570 PF00069 Protein kinase domain SP_RS08580 PF01029 NusB family SP_RS08580 PF01189 16S rRNA methyltransferase RsmB/F SP_RS08585 PF02911 Formyl transferase, C-terminal domain SP_RS08585 PF00551 Formyl transferase SP_RS08590 PF17764 3′ DNA-binding domain (3′BD) SP_RS08590 PF18074 Primosomal protein N C-terminal domain SP_RS08590 PF00271 Helicase conserved C-terminal domain SP_RS08590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SP_RS08590 PF04851 Type III restriction enzyme, res subunit SP_RS08595 PF01192 RNA polymerase Rpb6 SP_RS08600 PF00625 Guanylate kinase SP_RS08605 PF00013 KH domain SP_RS08605 PF01966 HD domain SP_RS08605 PF12072 Domain of unknown function (DUF3552) SP_RS08610 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SP_RS08620 PF05636 HIGH Nucleotidyl Transferase SP_RS08625 PF13649 Methyltransferase domain SP_RS08640 PF01966 HD domain SP_RS08645 PF01467 Cytidylyltransferase-like SP_RS08650 PF01985 CRS1 / YhbY (CRM) domain SP_RS08655 PF01926 50S ribosome-binding GTPase SP_RS08670 PF00924 Mechanosensitive ion channel SP_RS08695 PF16996 Accessory secretory protein Sec Asp4 SP_RS08705 PF00534 Glycosyl transferases group 1 SP_RS08710 PF01043 SecA preprotein cross-linking domain SP_RS08710 PF07517 SecA DEAD-like domain SP_RS08710 PF07516 SecA Wing and Scaffold domain SP_RS08715 PF15432 Accessory Sec secretory system ASP3 SP_RS08720 PF16929 Accessory Sec system GspB-transporter SP_RS08725 PF16993 Accessory Sec system protein Asp1 SP_RS08730 PF00344 SecY translocase SP_RS08735 PF00535 Glycosyl transferase family 2 SP_RS08740 PF01501 Glycosyl transferase family 8 SP_RS08745 PF01501 Glycosyl transferase family 8 SP_RS08750 PF08759 Glycosyltransferase GT-D fold SP_RS08750 PF01501 Glycosyl transferase family 8 SP_RS08765 PF01501 Glycosyl transferase family 8 SP_RS08765 PF00535 Glycosyl transferase family 2 SP_RS08770 PF01501 Glycosyl transferase family 8 SP_RS08775 PF01501 Glycosyl transferase family 8 SP_RS08775 PF00535 Glycosyl transferase family 2 SP_RS08805 PF00085 Thioredoxin SP_RS08810 PF14489 QueF-like protein SP_RS08810 PF06508 Queuosine biosynthesis protein QueC SP_RS08820 PF00230 Major intrinsic protein SP_RS08835 PF08439 Oligopeptidase F SP_RS08835 PF01432 Peptidase family M3 SP_RS08840 PF04452 RNA methyltransferase SP_RS08850 PF00293 NUDIX domain SP_RS08885 PF05496 Holliday junction DNA helicase RuvB P-loop domain SP_RS08885 PF12002 MgsA AAA+ ATPase C terminal SP_RS08885 PF16193 AAA C-terminal domain SP_RS08895 PF13683 Integrase core domain SP_RS08895 PF01610 Transposase SP_RS08910 PF08244 Glycosyl hydrolases family 32 C terminal SP_RS08910 PF00251 Glycosyl hydrolases family 32 N-terminal domain SP_RS08915 PF01547 Bacterial extracellular solute-binding protein SP_RS08920 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS08925 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS08930 PF13407 Periplasmic binding protein domain SP_RS08930 PF00356 Bacterial regulatory proteins, lacI family SP_RS08935 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SP_RS08935 PF08270 M protein trans-acting positive regulator (MGA) PRD domain SP_RS08935 PF05043 Mga helix-turn-helix domain SP_RS08955 PF03780 Asp23 family, cell envelope-related function SP_RS08960 PF05532 CsbD-like SP_RS08975 PF06750 Bacterial Peptidase A24 N-terminal domain SP_RS08975 PF01478 Type IV leader peptidase family SP_RS08990 PF00290 Tryptophan synthase alpha chain SP_RS08995 PF00291 Pyridoxal-phosphate dependent enzyme SP_RS09000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SP_RS09005 PF00218 Indole-3-glycerol phosphate synthase SP_RS09010 PF00591 Glycosyl transferase family, a/b domain SP_RS09010 PF02885 Glycosyl transferase family, helical bundle domain SP_RS09015 PF00117 Glutamine amidotransferase class-I SP_RS09020 PF00425 chorismate binding enzyme SP_RS09020 PF04715 Anthranilate synthase component I, N terminal region SP_RS09035 PF00356 Bacterial regulatory proteins, lacI family SP_RS09045 PF02308 MgtC family SP_RS09050 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS09055 PF08402 TOBE domain SP_RS09055 PF00005 ABC transporter SP_RS09070 PF16363 GDP-mannose 4,6 dehydratase SP_RS09075 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SP_RS09075 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SP_RS09080 PF01895 PhoU domain SP_RS09095 PF04650 YSIRK type signal peptide SP_RS09095 PF13229 Right handed beta helix region SP_RS09095 PF12708 Pectate lyase superfamily protein SP_RS09110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SP_RS09115 PF02397 Bacterial sugar transferase SP_RS09120 PF00664 ABC transporter transmembrane region SP_RS09120 PF00005 ABC transporter SP_RS09125 PF00664 ABC transporter transmembrane region SP_RS09125 PF00005 ABC transporter SP_RS09150 PF03372 Endonuclease/Exonuclease/phosphatase family SP_RS09165 PF00156 Phosphoribosyl transferase domain SP_RS09170 PF00860 Permease family SP_RS09175 PF14207 DpnD/PcfM-like protein SP_RS09180 PF06044 Dam-replacing family SP_RS09180 PF17726 Dam-replacing HTH domain SP_RS09190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SP_RS09190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SP_RS09195 PF08544 GHMP kinases C terminal SP_RS09195 PF10509 Galactokinase galactose-binding signature SP_RS09195 PF00288 GHMP kinases N terminal domain SP_RS09200 PF00356 Bacterial regulatory proteins, lacI family SP_RS09205 PF08240 Alcohol dehydrogenase GroES-like domain SP_RS09205 PF00107 Zinc-binding dehydrogenase SP_RS09210 PF13411 MerR HTH family regulatory protein SP_RS09215 PF01545 Cation efflux family SP_RS09225 PF04973 Nicotinamide mononucleotide transporter SP_RS09230 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS09235 PF00571 CBS domain SP_RS09235 PF00005 ABC transporter SP_RS09255 PF05343 M42 glutamyl aminopeptidase SP_RS09260 PF01370 NAD dependent epimerase/dehydratase family SP_RS09270 PF01032 FecCD transport family SP_RS09275 PF01032 FecCD transport family SP_RS09280 PF00005 ABC transporter SP_RS09285 PF01497 Periplasmic binding protein SP_RS09290 PF01809 Putative membrane protein insertion efficiency factor SP_RS09295 PF01479 S4 domain SP_RS09295 PF00849 RNA pseudouridylate synthase SP_RS09300 PF04079 Segregation and condensation complex subunit ScpB SP_RS09305 PF02616 Segregation and condensation protein ScpA SP_RS09310 PF00589 Phage integrase family SP_RS09310 PF02899 Phage integrase, N-terminal SAM-like domain SP_RS09325 PF01725 Ham1 family SP_RS09330 PF01177 Asp/Glu/Hydantoin racemase SP_RS09335 PF03672 Uncharacterised protein family (UPF0154) SP_RS09345 PF00128 Alpha amylase, catalytic domain SP_RS09345 PF16657 Maltogenic Amylase, C-terminal domain SP_RS09350 PF02378 Phosphotransferase system, EIIC SP_RS09350 PF00367 phosphotransferase system, EIIB SP_RS09355 PF07702 UTRA domain SP_RS09355 PF00392 Bacterial regulatory proteins, gntR family SP_RS09370 PF01610 Transposase SP_RS09370 PF13683 Integrase core domain SP_RS09375 PF00005 ABC transporter SP_RS09375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SP_RS09380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SP_RS09380 PF00005 ABC transporter SP_RS09385 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS09385 PF12911 N-terminal TM domain of oligopeptide transport permease C SP_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS09395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SP_RS09405 PF00128 Alpha amylase, catalytic domain SP_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS09425 PF01547 Bacterial extracellular solute-binding protein SP_RS09430 PF16874 Glycosyl hydrolase family 36 C-terminal domain SP_RS09430 PF16875 Glycosyl hydrolase family 36 N-terminal domain SP_RS09435 PF12833 Helix-turn-helix domain SP_RS09435 PF02311 AraC-like ligand binding domain SP_RS09440 PF02237 Biotin protein ligase C terminal domain SP_RS09440 PF03099 Biotin/lipoate A/B protein ligase family SP_RS09555 PF01938 TRAM domain SP_RS09555 PF05958 tRNA (Uracil-5-)-methyltransferase SP_RS09560 PF02631 RecX family SP_RS09565 PF04167 Protein of unknown function (DUF402) SP_RS09580 PF13683 Integrase core domain SP_RS09580 PF01610 Transposase SP_RS09585 PF00118 TCP-1/cpn60 chaperonin family SP_RS09590 PF00166 Chaperonin 10 Kd subunit SP_RS09595 PF00436 Single-strand binding protein family SP_RS09600 PF00106 short chain dehydrogenase SP_RS09605 PF14794 Domain of unknown function (DUF4479) SP_RS09605 PF01588 Putative tRNA binding domain SP_RS09610 PF00085 Thioredoxin SP_RS09650 PF00005 ABC transporter SP_RS09650 PF00664 ABC transporter transmembrane region SP_RS09665 PF01709 Transcriptional regulator SP_RS09670 PF01289 Thiol-activated cytolysin SP_RS09670 PF17440 Thiol-activated cytolysin beta sandwich domain SP_RS09740 PF01473 Putative cell wall binding repeat SP_RS09740 PF01510 N-acetylmuramoyl-L-alanine amidase SP_RS09750 PF00154 recA bacterial DNA recombination protein SP_RS09755 PF02464 Competence-damaged protein SP_RS09755 PF18146 Damage-inducible protein CinA KH domain SP_RS09755 PF00994 Probable molybdopterin binding domain SP_RS09760 PF03816 Cell envelope-related transcriptional attenuator domain SP_RS09770 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SP_RS09800 PF05147 Lanthionine synthetase C-like protein SP_RS09800 PF13575 Domain of unknown function (DUF4135) SP_RS09815 PF00005 ABC transporter SP_RS09815 PF03412 Peptidase C39 family SP_RS09815 PF00664 ABC transporter transmembrane region SP_RS09820 PF00082 Subtilase family SP_RS09835 PF00005 ABC transporter SP_RS09845 PF00334 Nucleoside diphosphate kinase SP_RS09850 PF00623 RNA polymerase Rpb1, domain 2 SP_RS09850 PF05000 RNA polymerase Rpb1, domain 4 SP_RS09850 PF04997 RNA polymerase Rpb1, domain 1 SP_RS09850 PF04983 RNA polymerase Rpb1, domain 3 SP_RS09850 PF04998 RNA polymerase Rpb1, domain 5 SP_RS09855 PF04561 RNA polymerase Rpb2, domain 2 SP_RS09855 PF04565 RNA polymerase Rpb2, domain 3 SP_RS09855 PF04563 RNA polymerase beta subunit SP_RS09855 PF10385 RNA polymerase beta subunit external 1 domain SP_RS09855 PF00562 RNA polymerase Rpb2, domain 6 SP_RS09855 PF04560 RNA polymerase Rpb2, domain 7 SP_RS09865 PF00571 CBS domain SP_RS09865 PF03471 Transporter associated domain SP_RS09865 PF01595 Cyclin M transmembrane N-terminal domain SP_RS09870 PF01223 DNA/RNA non-specific endonuclease SP_RS09875 PF11772 DNA-directed RNA polymerase subunit beta SP_RS09880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SP_RS09890 PF05362 Lon protease (S16) C-terminal proteolytic domain SP_RS09890 PF13180 PDZ domain SP_RS09895 PF01467 Cytidylyltransferase-like SP_RS09905 PF03590 Aspartate-ammonia ligase SP_RS09915 PF01027 Inhibitor of apoptosis-promoting Bax1 SP_RS09920 PF08032 RNA 2'-O ribose methyltransferase substrate binding SP_RS09920 PF00588 SpoU rRNA Methylase family SP_RS09925 PF00708 Acylphosphatase SP_RS09930 PF02096 60Kd inner membrane protein SP_RS09935 PF04055 Radical SAM superfamily SP_RS09940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SP_RS09940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SP_RS09945 PF09182 Bacterial purine repressor, N-terminal SP_RS09945 PF00156 Phosphoribosyl transferase domain SP_RS09950 PF01336 OB-fold nucleic acid binding domain SP_RS09950 PF01966 HD domain SP_RS09955 PF02646 RmuC family SP_RS09960 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SP_RS09960 PF04263 Thiamin pyrophosphokinase, catalytic domain SP_RS09965 PF00834 Ribulose-phosphate 3 epimerase family SP_RS09970 PF16745 RsgA N-terminal domain SP_RS09970 PF03193 RsgA GTPase SP_RS09975 PF00398 Ribosomal RNA adenine dimethylase SP_RS09985 PF12704 MacB-like periplasmic core domain SP_RS09985 PF02687 FtsX-like permease family SP_RS09985 PF00005 ABC transporter SP_RS10000 PF13331 Domain of unknown function (DUF4093) SP_RS10000 PF13662 Toprim domain SP_RS10005 PF01026 TatD related DNase SP_RS10015 PF00468 Ribosomal protein L34 SP_RS10020 PF00155 Aminotransferase class I and II SP_RS10030 PF00582 Universal stress protein family SP_RS10040 PF00710 Asparaginase, N-terminal SP_RS10040 PF17763 Glutaminase/Asparaginase C-terminal domain SP_RS10050 PF00356 Bacterial regulatory proteins, lacI family SP_RS10055 PF00072 Response regulator receiver domain SP_RS10055 PF00196 Bacterial regulatory proteins, luxR family SP_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS10060 PF07730 Histidine kinase SP_RS10070 PF00005 ABC transporter SP_RS10160 PF02357 Transcription termination factor nusG SP_RS10160 PF00467 KOW motif SP_RS10170 PF00471 Ribosomal protein L33 SP_RS10175 PF00905 Penicillin binding protein transpeptidase domain SP_RS10175 PF00912 Transglycosylase SP_RS10180 PF00849 RNA pseudouridylate synthase SP_RS10185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SP_RS10185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SP_RS10190 PF02687 FtsX-like permease family SP_RS10190 PF12704 MacB-like periplasmic core domain SP_RS10205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SP_RS10205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SP_RS10215 PF00005 ABC transporter SP_RS10220 PF07702 UTRA domain SP_RS10220 PF00392 Bacterial regulatory proteins, gntR family SP_RS10225 PF00232 Glycosyl hydrolase family 1 SP_RS10230 PF02378 Phosphotransferase system, EIIC SP_RS10235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS10240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP_RS10245 PF00465 Iron-containing alcohol dehydrogenase SP_RS10245 PF00171 Aldehyde dehydrogenase family SP_RS10255 PF01451 Low molecular weight phosphotyrosine protein phosphatase SP_RS10265 PF02779 Transketolase, pyrimidine binding domain SP_RS10265 PF00456 Transketolase, thiamine diphosphate binding domain SP_RS10265 PF02780 Transketolase, C-terminal domain SP_RS10280 PF00596 Class II Aldolase and Adducin N-terminal domain SP_RS10285 PF01261 Xylose isomerase-like TIM barrel SP_RS10290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SP_RS10295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP_RS10300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP_RS10305 PF03611 PTS system sugar-specific permease component SP_RS10315 PF14804 Jag N-terminus SP_RS10315 PF01424 R3H domain SP_RS10320 PF02096 60Kd inner membrane protein SP_RS10325 PF00825 Ribonuclease P SP_RS10330 PF00871 Acetokinase family SP_RS10370 PF07963 Prokaryotic N-terminal methylation motif SP_RS10375 PF00482 Type II secretion system (T2SS), protein F SP_RS10380 PF00437 Type II/IV secretion system protein SP_RS10390 PF08240 Alcohol dehydrogenase GroES-like domain SP_RS10390 PF00107 Zinc-binding dehydrogenase SP_RS10390 PF13823 Alcohol dehydrogenase GroES-associated SP_RS10395 PF01979 Amidohydrolase family SP_RS10400 PF01757 Acyltransferase family SP_RS10405 PF01702 Queuine tRNA-ribosyltransferase SP_RS10415 PF01470 Pyroglutamyl peptidase SP_RS10420 PF06993 Protein of unknown function (DUF1304) SP_RS10435 PF00475 Imidazoleglycerol-phosphate dehydratase SP_RS10435 PF08645 Polynucleotide kinase 3 phosphatase SP_RS10440 PF01554 MatE SP_RS10445 PF14821 Threonine synthase N terminus SP_RS10445 PF00291 Pyridoxal-phosphate dependent enzyme SP_RS10535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SP_RS10540 PF00749 tRNA synthetases class I (E and Q), catalytic domain SP_RS10545 PF00342 Phosphoglucose isomerase SP_RS10555 PF07722 Peptidase C26 SP_RS10560 PF00005 ABC transporter SP_RS10560 PF00664 ABC transporter transmembrane region SP_RS10570 PF00664 ABC transporter transmembrane region SP_RS10570 PF00005 ABC transporter SP_RS10580 PF02863 Arginine repressor, C-terminal domain SP_RS10580 PF01316 Arginine repressor, DNA binding domain SP_RS10585 PF03485 Arginyl tRNA synthetase N terminal domain SP_RS10585 PF05746 DALR anticodon binding domain SP_RS10585 PF00750 tRNA synthetases class I (R) SP_RS10600 PF00072 Response regulator receiver domain SP_RS10600 PF00486 Transcriptional regulatory protein, C terminal SP_RS10605 PF16736 Single Cache-like SP_RS10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS10605 PF00989 PAS fold SP_RS10605 PF00512 His Kinase A (phospho-acceptor) domain SP_RS10610 PF12849 PBP superfamily domain SP_RS10615 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS10620 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS10625 PF00005 ABC transporter SP_RS10630 PF01895 PhoU domain SP_RS10645 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SP_RS10645 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SP_RS10650 PF00483 Nucleotidyl transferase SP_RS10670 PF01812 5-formyltetrahydrofolate cyclo-ligase family SP_RS10675 PF07687 Peptidase dimerisation domain SP_RS10675 PF01546 Peptidase family M20/M25/M40 SP_RS10680 PF00132 Bacterial transferase hexapeptide (six repeats) SP_RS10680 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SP_RS10680 PF14602 Hexapeptide repeat of succinyl-transferase SP_RS10685 PF00892 EamA-like transporter family SP_RS10690 PF00912 Transglycosylase SP_RS10690 PF00905 Penicillin binding protein transpeptidase domain SP_RS10695 PF00579 tRNA synthetases class I (W and Y) SP_RS10695 PF01479 S4 domain SP_RS10700 PF00403 Heavy-metal-associated domain SP_RS10710 PF13847 Methyltransferase domain SP_RS10735 PF00343 Carbohydrate phosphorylase SP_RS10740 PF02446 4-alpha-glucanotransferase SP_RS10745 PF13416 Bacterial extracellular solute-binding protein SP_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS10755 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS10765 PF00356 Bacterial regulatory proteins, lacI family SP_RS10765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SP_RS10775 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SP_RS10775 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SP_RS10780 PF01336 OB-fold nucleic acid binding domain SP_RS10780 PF00152 tRNA synthetases class II (D, K and N) SP_RS10780 PF02938 GAD domain SP_RS10810 PF01381 Helix-turn-helix SP_RS10825 PF03129 Anticodon binding domain SP_RS10825 PF13393 Histidyl-tRNA synthetase SP_RS10840 PF01883 Iron-sulfur cluster assembly protein SP_RS10850 PF00920 Dehydratase family SP_RS10855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SP_RS10855 PF02780 Transketolase, C-terminal domain SP_RS10855 PF02779 Transketolase, pyrimidine binding domain SP_RS10860 PF00456 Transketolase, thiamine diphosphate binding domain SP_RS10865 PF03611 PTS system sugar-specific permease component SP_RS10875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP_RS10890 PF01783 Ribosomal L32p protein family SP_RS10895 PF00471 Ribosomal protein L33 SP_RS10930 PF00480 ROK family SP_RS10935 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SP_RS10935 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SP_RS10935 PF07748 Glycosyl hydrolases family 38 C-terminal domain SP_RS10935 PF01074 Glycosyl hydrolases family 38 N-terminal domain SP_RS10935 PF09261 Alpha mannosidase middle domain SP_RS10945 PF17678 Glycosyl hydrolase family 92 N-terminal domain SP_RS10945 PF07971 Glycosyl hydrolase family 92 SP_RS10960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SP_RS10960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SP_RS10965 PF00696 Amino acid kinase family SP_RS10970 PF03606 C4-dicarboxylate anaerobic carrier SP_RS10975 PF01546 Peptidase family M20/M25/M40 SP_RS10990 PF00746 LPXTG cell wall anchor motif SP_RS10990 PF07501 G5 domain SP_RS10990 PF00728 Glycosyl hydrolase family 20, catalytic domain SP_RS10990 PF04650 YSIRK type signal peptide SP_RS11005 PF00465 Iron-containing alcohol dehydrogenase SP_RS11010 PF02952 L-fucose isomerase, C-terminal domain SP_RS11010 PF07882 L-fucose isomerase, second N-terminal domain SP_RS11010 PF07881 L-fucose isomerase, first N-terminal domain SP_RS11015 PF08307 Glycosyl hydrolase family 98 C-terminal domain SP_RS11015 PF08305 NPCBM/NEW2 domain SP_RS11015 PF08306 Glycosyl hydrolase family 98 SP_RS11025 PF03613 PTS system mannose/fructose/sorbose family IID component SP_RS11035 PF03830 PTS system sorbose subfamily IIB component SP_RS11045 PF05025 RbsD / FucU transport protein family SP_RS11050 PF00596 Class II Aldolase and Adducin N-terminal domain SP_RS11055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SP_RS11055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SP_RS11060 PF00455 DeoR C terminal sensor domain SP_RS11060 PF08220 DeoR-like helix-turn-helix domain SP_RS11065 PF01297 Zinc-uptake complex component A periplasmic SP_RS11065 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SP_RS11070 PF00950 ABC 3 transport family SP_RS11075 PF00005 ABC transporter SP_RS11080 PF01047 MarR family SP_RS11085 PF04914 DltD protein SP_RS11090 PF00550 Phosphopantetheine attachment site SP_RS11095 PF03062 MBOAT, membrane-bound O-acyltransferase family SP_RS11100 PF13193 AMP-binding enzyme C-terminal domain SP_RS11100 PF00501 AMP-binding enzyme SP_RS11120 PF07690 Major Facilitator Superfamily SP_RS11130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SP_RS11155 PF00230 Major intrinsic protein SP_RS11160 PF01266 FAD dependent oxidoreductase SP_RS11160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SP_RS11165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SP_RS11165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SP_RS11175 PF01430 Hsp33 protein SP_RS11180 PF01207 Dihydrouridine synthase (Dus) SP_RS11190 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SP_RS11195 PF00672 HAMP domain SP_RS11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP_RS11195 PF00512 His Kinase A (phospho-acceptor) domain SP_RS11200 PF00486 Transcriptional regulatory protein, C terminal SP_RS11200 PF00072 Response regulator receiver domain SP_RS11210 PF07724 AAA domain (Cdc48 subfamily) SP_RS11210 PF00004 ATPase family associated with various cellular activities (AAA) SP_RS11210 PF17871 AAA lid domain SP_RS11210 PF10431 C-terminal, D2-small domain, of ClpB protein SP_RS11210 PF02861 Clp amino terminal domain, pathogenicity island component SP_RS11215 PF17727 CtsR C-terminal dimerization domain SP_RS11215 PF05848 CtsR N-terminal HTH domain SP_RS11220 PF00005 ABC transporter SP_RS11225 PF09084 NMT1/THI5 like SP_RS11230 PF00528 Binding-protein-dependent transport system inner membrane component SP_RS11250 PF00772 DnaB-like helicase N terminal domain SP_RS11250 PF03796 DnaB-like helicase C terminal domain SP_RS11255 PF03948 Ribosomal protein L9, C-terminal domain SP_RS11255 PF01281 Ribosomal protein L9, N-terminal domain SP_RS11260 PF02272 DHHA1 domain SP_RS11260 PF01368 DHH family SP_RS11265 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SP_RS11265 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SP_RS11275 PF00271 Helicase conserved C-terminal domain SP_RS11275 PF04851 Type III restriction enzyme, res subunit SP_RS11280 PF01205 Uncharacterized protein family UPF0029 SP_RS11280 PF09186 Domain of unknown function (DUF1949) SP_RS11285 PF00291 Pyridoxal-phosphate dependent enzyme SP_RS11295 PF13358 DDE superfamily endonuclease SP_RS11305 PF00889 Elongation factor TS SP_RS11310 PF00318 Ribosomal protein S2 SP_RS11315 PF01476 LysM domain SP_RS11315 PF05257 CHAP domain SP_RS11325 PF04085 rod shape-determining protein MreC SP_RS11330 PF02361 Cobalt transport protein SP_RS11335 PF00005 ABC transporter SP_RS11340 PF00005 ABC transporter SP_RS11345 PF01066 CDP-alcohol phosphatidyltransferase SP_RS11355 PF00675 Insulinase (Peptidase family M16) SP_RS11355 PF05193 Peptidase M16 inactive domain SP_RS11360 PF00675 Insulinase (Peptidase family M16) SP_RS11360 PF05193 Peptidase M16 inactive domain SP_RS11370 PF02463 RecF/RecN/SMC N terminal domain SP_RS11375 PF00478 IMP dehydrogenase / GMP reductase domain SP_RS11375 PF00571 CBS domain SP_RS11380 PF00579 tRNA synthetases class I (W and Y) SP_RS11385 PF00005 ABC transporter SP_RS11385 PF12848 ABC transporter SP_RS11435 PF03047 COMC family SP_RS11445 PF02590 Predicted SPOUT methyltransferase SP_RS11450 PF13180 PDZ domain SP_RS11455 PF17762 HTH domain found in ParB protein SP_RS11455 PF02195 ParB-like nuclease domain SP_RS11490 PF00005 ABC transporter SP_RS11490 PF00664 ABC transporter transmembrane region