SP_RS00005	SM00382	ATPases associated with a variety of cellular activities
SP_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SP_RS00010	SM00480	DNA polymerase III beta subunit
SP_RS00030	SM00487	DEAD-like helicases superfamily
SP_RS00030	SM00490	helicase superfamily c-terminal domain
SP_RS00030	SM00982	SP_RS00030
SP_RS00030	SM01058	CarD-like/TRCF domain
SP_RS00035	SM00363	S4 RNA-binding domain
SP_RS00055	SM00977	TilS substrate C-terminal domain
SP_RS00065	SM00382	ATPases associated with a variety of cellular activities
SP_RS00135	SM00788	Adenylosuccinate synthetase
SP_RS00150	SM00855	Phosphoglycerate mutase family
SP_RS00155	SM00382	ATPases associated with a variety of cellular activities
SP_RS00160	SM00947	Carbonic anhydrase
SP_RS00175	SM01400	SP_RS00175
SP_RS00195	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SP_RS00195	SM00474	3'-5' exonuclease
SP_RS00195	SM00475	5'-3' exonuclease
SP_RS00195	SM00482	DNA polymerase A domain
SP_RS00200	SM00881	CoA binding domain
SP_RS00255	SM00382	ATPases associated with a variety of cellular activities
SP_RS00270	SM01211	SP_RS00270
SP_RS00295	SM00798	AICARFT/IMPCHase bienzyme
SP_RS00295	SM00851	MGS-like domain
SP_RS00300	SM01209	SP_RS00300
SP_RS00300	SM01210	SP_RS00300
SP_RS00305	SM01001	AIR carboxylase
SP_RS00320	SM00998	Adenylosuccinate lyase C-terminus
SP_RS00325	SM01208	SP_RS00325
SP_RS00330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SP_RS00330	SM00866	SP_RS00330
SP_RS00380	SM01208	SP_RS00380
SP_RS00390	SM01266	SP_RS00390
SP_RS00430	SM00448	cheY-homologous receiver domain
SP_RS00430	SM00862	Transcriptional regulatory protein, C terminal
SP_RS00435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SP_RS00435	SM00387	Histidine kinase-like ATPases
SP_RS00435	SM00388	His Kinase A (phosphoacceptor) domain
SP_RS00440	SM00363	S4 RNA-binding domain
SP_RS00440	SM01390	SP_RS00440
SP_RS00480	SM00450	Rhodanese Homology Domain
SP_RS00545	SM00257	Lysin motif
SP_RS00565	SM00382	ATPases associated with a variety of cellular activities
SP_RS00570	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS00570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SP_RS00610	SM01228	SP_RS00610
SP_RS00620	SM00849	Metallo-beta-lactamase superfamily
SP_RS00700	SM00382	ATPases associated with a variety of cellular activities
SP_RS00725	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS00765	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS00780	SM00382	ATPases associated with a variety of cellular activities
SP_RS00780	SM00930	SP_RS00780
SP_RS00805	SM00342	helix_turn_helix, arabinose operon control protein
SP_RS00805	SM00448	cheY-homologous receiver domain
SP_RS00830	SM00850	LytTr DNA-binding domain
SP_RS00835	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS00865	SM00853	MutL C terminal dimerisation domain
SP_RS00865	SM01340	SP_RS00865
SP_RS00890	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SP_RS00920	SM00382	ATPases associated with a variety of cellular activities
SP_RS00945	SM00732	Likely ribonuclease with RNase H fold.
SP_RS00965	SM00155	Phospholipase D. Active site motifs.
SP_RS01005	SM01403	SP_RS01005
SP_RS01025	SM01382	SP_RS01025
SP_RS01025	SM01383	SP_RS01025
SP_RS01040	SM00322	K homology RNA-binding domain
SP_RS01060	SM01374	SP_RS01060
SP_RS01065	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SP_RS01120	SM00316	Ribosomal protein S1-like RNA-binding domain
SP_RS01140	SM00662	RNA polymerases D
SP_RS01160	SM00855	Phosphoglycerate mutase family
SP_RS01180	SM00382	ATPases associated with a variety of cellular activities
SP_RS01195	SM00420	helix_turn_helix, Deoxyribose operon repressor
SP_RS01195	SM01134	SP_RS01195
SP_RS01270	SM00382	ATPases associated with a variety of cellular activities
SP_RS01315	SM00642	Alpha-amylase domain
SP_RS01330	SM00838	Elongation factor G C-terminus
SP_RS01330	SM00889	Elongation factor G, domain IV
SP_RS01335	SM00479	SP_RS01335
SP_RS01335	SM00481	DNA polymerase alpha chain like domain
SP_RS01370	SM00363	S4 RNA-binding domain
SP_RS01400	SM00829	Enoylreductase
SP_RS01435	SM00905	Dihydroneopterin aldolase
SP_RS01535	SM01321	SP_RS01535
SP_RS01585	SM01323	SP_RS01585
SP_RS01605	SM00354	helix_turn _helix lactose operon repressor
SP_RS01625	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS01640	SM00740	SP_RS01640
SP_RS01650	SM00382	ATPases associated with a variety of cellular activities
SP_RS01650	SM01086	C-terminal, D2-small domain, of ClpB protein
SP_RS01665	SM00642	Alpha-amylase domain
SP_RS01825	SM00981	SP_RS01825
SP_RS01835	SM01350	SP_RS01835
SP_RS01840	SM00448	cheY-homologous receiver domain
SP_RS01840	SM00862	Transcriptional regulatory protein, C terminal
SP_RS01895	SM00387	Histidine kinase-like ATPases
SP_RS01900	SM00421	helix_turn_helix, Lux Regulon
SP_RS01900	SM00448	cheY-homologous receiver domain
SP_RS02015	SM00463	Small MutS-related domain
SP_RS02015	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SP_RS02015	SM00534	ATPase domain of DNA mismatch repair MUTS family
SP_RS02055	SM00347	helix_turn_helix multiple antibiotic resistance protein
SP_RS02075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SP_RS02080	SM00822	SP_RS02080
SP_RS02085	SM00825	Beta-ketoacyl synthase
SP_RS02100	SM00878	Biotin carboxylase C-terminal domain
SP_RS02145	SM00841	Elongation factor P, C-terminal
SP_RS02145	SM01185	SP_RS02145
SP_RS02150	SM00845	GatB domain
SP_RS02185	SM01120	SP_RS02185
SP_RS02185	SM01121	SP_RS02185
SP_RS02225	SM00382	ATPases associated with a variety of cellular activities
SP_RS02230	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS02280	SM00327	von Willebrand factor (vWF) type A domain
SP_RS02390	SM00382	ATPases associated with a variety of cellular activities
SP_RS02410	SM00014	Acid phosphatase homologues
SP_RS02450	SM01208	SP_RS02450
SP_RS02465	SM00422	helix_turn_helix, mercury resistance
SP_RS02470	SM01230	SP_RS02470
SP_RS02505	SM00487	DEAD-like helicases superfamily
SP_RS02540	SM00271	DnaJ molecular chaperone homology domain
SP_RS02555	SM00382	ATPases associated with a variety of cellular activities
SP_RS02570	SM00850	LytTr DNA-binding domain
SP_RS02575	SM00448	cheY-homologous receiver domain
SP_RS02575	SM00850	LytTr DNA-binding domain
SP_RS02715	SM00322	K homology RNA-binding domain
SP_RS02850	SM01061	CAT RNA binding domain
SP_RS02875	SM00873	B3/4 domain
SP_RS02875	SM00874	tRNA synthetase B5 domain
SP_RS02875	SM00896	Ferredoxin-fold anticodon binding domain
SP_RS02895	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS02910	SM00316	Ribosomal protein S1-like RNA-binding domain
SP_RS02910	SM00322	K homology RNA-binding domain
SP_RS02925	SM00840	SP_RS02925
SP_RS02955	SM00382	ATPases associated with a variety of cellular activities
SP_RS02965	SM00448	cheY-homologous receiver domain
SP_RS02965	SM00862	Transcriptional regulatory protein, C terminal
SP_RS02970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SP_RS02970	SM00387	Histidine kinase-like ATPases
SP_RS02970	SM00388	His Kinase A (phosphoacceptor) domain
SP_RS02995	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS03000	SM00382	ATPases associated with a variety of cellular activities
SP_RS03010	SM00849	Metallo-beta-lactamase superfamily
SP_RS03035	SM00465	GIY-YIG type nucleases (URI domain)
SP_RS03045	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS03060	SM00986	Uracil DNA glycosylase superfamily
SP_RS03060	SM00987	UreE urease accessory protein, C-terminal domain 
SP_RS03090	SM00649	Ribosomal protein L11/L12
SP_RS03115	SM00382	ATPases associated with a variety of cellular activities
SP_RS03175	SM01208	SP_RS03175
SP_RS03245	SM00342	helix_turn_helix, arabinose operon control protein
SP_RS03245	SM00448	cheY-homologous receiver domain
SP_RS03250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SP_RS03250	SM00387	Histidine kinase-like ATPases
SP_RS03275	SM00894	Excalibur calcium-binding domain
SP_RS03330	SM00450	Rhodanese Homology Domain
SP_RS03345	SM00838	Elongation factor G C-terminus
SP_RS03365	SM00382	ATPases associated with a variety of cellular activities
SP_RS03425	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SP_RS03455	SM00382	ATPases associated with a variety of cellular activities
SP_RS03460	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS03470	SM00382	ATPases associated with a variety of cellular activities
SP_RS03525	SM00382	ATPases associated with a variety of cellular activities
SP_RS03620	SM00422	helix_turn_helix, mercury resistance
SP_RS03680	SM00382	ATPases associated with a variety of cellular activities
SP_RS03685	SM00382	ATPases associated with a variety of cellular activities
SP_RS03690	SM00116	Domain in cystathionine beta-synthase and other proteins.
SP_RS03695	SM00937	SP_RS03695
SP_RS03700	SM00382	ATPases associated with a variety of cellular activities
SP_RS03720	SM00487	DEAD-like helicases superfamily
SP_RS03720	SM00490	helicase superfamily c-terminal domain
SP_RS03760	SM00382	ATPases associated with a variety of cellular activities
SP_RS03840	SM00382	ATPases associated with a variety of cellular activities
SP_RS03895	SM01022	SP_RS03895
SP_RS03905	SM00448	cheY-homologous receiver domain
SP_RS03905	SM00862	Transcriptional regulatory protein, C terminal
SP_RS03910	SM00387	Histidine kinase-like ATPases
SP_RS03910	SM00388	His Kinase A (phosphoacceptor) domain
SP_RS03930	SM00479	SP_RS03930
SP_RS03930	SM00487	DEAD-like helicases superfamily
SP_RS03930	SM00491	SP_RS03930
SP_RS03950	SM00387	Histidine kinase-like ATPases
SP_RS03950	SM00433	TopoisomeraseII
SP_RS04015	SM00382	ATPases associated with a variety of cellular activities
SP_RS04015	SM01086	C-terminal, D2-small domain, of ClpB protein
SP_RS04030	SM00382	ATPases associated with a variety of cellular activities
SP_RS04120	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SP_RS04125	SM01133	SP_RS04125
SP_RS04140	SM00382	ATPases associated with a variety of cellular activities
SP_RS04175	SM01207	SP_RS04175
SP_RS04180	SM00387	Histidine kinase-like ATPases
SP_RS04180	SM00433	TopoisomeraseII
SP_RS04190	SM00434	DNA Topoisomerase IV
SP_RS04235	SM00316	Ribosomal protein S1-like RNA-binding domain
SP_RS04260	SM00382	ATPases associated with a variety of cellular activities
SP_RS04270	SM00382	ATPases associated with a variety of cellular activities
SP_RS04300	SM00936	Penicillin-binding protein 5, C-terminal domain 
SP_RS04315	SM00420	helix_turn_helix, Deoxyribose operon repressor
SP_RS04315	SM01134	SP_RS04315
SP_RS04330	SM00382	ATPases associated with a variety of cellular activities
SP_RS04330	SM00843	SP_RS04330
SP_RS04345	SM00981	SP_RS04345
SP_RS04400	SM00487	DEAD-like helicases superfamily
SP_RS04410	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SP_RS04410	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
SP_RS04415	SM00481	DNA polymerase alpha chain like domain
SP_RS04485	SM00316	Ribosomal protein S1-like RNA-binding domain
SP_RS04485	SM00732	Likely ribonuclease with RNase H fold.
SP_RS04490	SM00731	SprT homologues.
SP_RS04505	SM00382	ATPases associated with a variety of cellular activities
SP_RS04595	SM00363	S4 RNA-binding domain
SP_RS04600	SM00849	Metallo-beta-lactamase superfamily
SP_RS04605	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SP_RS04720	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SP_RS04730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SP_RS04745	SM00382	ATPases associated with a variety of cellular activities
SP_RS04785	SM00047	Lysozyme subfamily 2
SP_RS04810	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SP_RS04810	SM01232	SP_RS04810
SP_RS04835	SM00316	Ribosomal protein S1-like RNA-binding domain
SP_RS04835	SM00955	SP_RS04835
SP_RS04880	SM00855	Phosphoglycerate mutase family
SP_RS04925	SM00479	SP_RS04925
SP_RS05030	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SP_RS05035	SM01130	SP_RS05035
SP_RS05065	SM00937	SP_RS05065
SP_RS05135	SM00382	ATPases associated with a variety of cellular activities
SP_RS05150	SM00857	Resolvase, N terminal domain
SP_RS05175	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SP_RS05195	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS05230	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS05245	SM00220	Serine/Threonine protein kinases, catalytic domain
SP_RS05250	SM00382	ATPases associated with a variety of cellular activities
SP_RS05260	SM01321	SP_RS05260
SP_RS05265	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS05295	SM00382	ATPases associated with a variety of cellular activities
SP_RS05300	SM00400	zinc finger
SP_RS05300	SM00493	SP_RS05300
SP_RS05355	SM00116	Domain in cystathionine beta-synthase and other proteins.
SP_RS05400	SM00881	CoA binding domain
SP_RS05420	SM01400	SP_RS05420
SP_RS05425	SM01118	SP_RS05425
SP_RS05430	SM00954	Region found in RelA / SpoT proteins
SP_RS05495	SM00904	Riboflavin kinase
SP_RS05510	SM00411	bacterial (prokaryotic) histone like domain
SP_RS05515	SM00382	ATPases associated with a variety of cellular activities
SP_RS05530	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SP_RS05530	SM00292	breast cancer carboxy-terminal domain
SP_RS05530	SM00532	Ligase N family
SP_RS05535	SM00642	Alpha-amylase domain
SP_RS05550	SM00642	Alpha-amylase domain
SP_RS05590	SM01192	SP_RS05590
SP_RS05590	SM01193	SP_RS05590
SP_RS05600	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS05630	SM00382	ATPases associated with a variety of cellular activities
SP_RS05660	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS05695	SM01208	SP_RS05695
SP_RS05735	SM00861	Transketolase, pyrimidine binding domain
SP_RS05765	SM00986	Uracil DNA glycosylase superfamily
SP_RS05765	SM00987	UreE urease accessory protein, C-terminal domain 
SP_RS05820	SM00420	helix_turn_helix, Deoxyribose operon repressor
SP_RS05820	SM01134	SP_RS05820
SP_RS05840	SM01061	CAT RNA binding domain
SP_RS05850	SM01133	SP_RS05850
SP_RS05895	SM00838	Elongation factor G C-terminus
SP_RS05915	SM00363	S4 RNA-binding domain
SP_RS05975	SM00434	DNA Topoisomerase IV
SP_RS05985	SM00974	SP_RS05985
SP_RS06005	SM00849	Metallo-beta-lactamase superfamily
SP_RS06010	SM00091	PAS domain
SP_RS06010	SM00387	Histidine kinase-like ATPases
SP_RS06010	SM00388	His Kinase A (phosphoacceptor) domain
SP_RS06015	SM00448	cheY-homologous receiver domain
SP_RS06015	SM00862	Transcriptional regulatory protein, C terminal
SP_RS06020	SM00478	endonuclease III
SP_RS06070	SM00487	DEAD-like helicases superfamily
SP_RS06070	SM00490	helicase superfamily c-terminal domain
SP_RS06080	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS06080	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SP_RS06085	SM00382	ATPases associated with a variety of cellular activities
SP_RS06095	SM00382	ATPases associated with a variety of cellular activities
SP_RS06095	SM00962	SRP54-type protein, GTPase domain
SP_RS06095	SM00963	SRP54-type protein, helical bundle domain
SP_RS06110	SM00968	SMC proteins Flexible Hinge Domain
SP_RS06115	SM00358	Double-stranded RNA binding motif
SP_RS06115	SM00535	Ribonuclease III family
SP_RS06125	SM01240	SP_RS06125
SP_RS06135	SM00382	ATPases associated with a variety of cellular activities
SP_RS06160	SM01329	SP_RS06160
SP_RS06170	SM00917	LeuA allosteric (dimerisation) domain
SP_RS06195	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SP_RS06195	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SP_RS06195	SM00493	SP_RS06195
SP_RS06250	SM00851	MGS-like domain
SP_RS06250	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SP_RS06250	SM01209	SP_RS06250
SP_RS06255	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SP_RS06270	SM00478	endonuclease III
SP_RS06285	SM00382	ATPases associated with a variety of cellular activities
SP_RS06310	SM00382	ATPases associated with a variety of cellular activities
SP_RS06310	SM00962	SRP54-type protein, GTPase domain
SP_RS06310	SM00963	SRP54-type protein, helical bundle domain
SP_RS06325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SP_RS06335	SM00513	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
SP_RS06360	SM00830	Chorismate mutase type II
SP_RS06400	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SP_RS06525	SM01130	SP_RS06525
SP_RS06580	SM00382	ATPases associated with a variety of cellular activities
SP_RS06640	SM00382	ATPases associated with a variety of cellular activities
SP_RS06645	SM00382	ATPases associated with a variety of cellular activities
SP_RS06770	SM00382	ATPases associated with a variety of cellular activities
SP_RS06775	SM00642	Alpha-amylase domain
SP_RS06780	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SP_RS06810	SM00382	ATPases associated with a variety of cellular activities
SP_RS06830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SP_RS06835	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS06835	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SP_RS06845	SM00382	ATPases associated with a variety of cellular activities
SP_RS06850	SM00382	ATPases associated with a variety of cellular activities
SP_RS06905	SM00729	Elongator protein 3, MiaB family, Radical SAM
SP_RS06980	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS06995	SM00382	ATPases associated with a variety of cellular activities
SP_RS07030	SM00342	helix_turn_helix, arabinose operon control protein
SP_RS07035	SM00382	ATPases associated with a variety of cellular activities
SP_RS07040	SM00382	ATPases associated with a variety of cellular activities
SP_RS07055	SM00382	ATPases associated with a variety of cellular activities
SP_RS07105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SP_RS07105	SM00866	SP_RS07105
SP_RS07140	SM00854	Bacterial capsule synthesis protein PGA_cap
SP_RS07160	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SP_RS07175	SM00382	ATPases associated with a variety of cellular activities
SP_RS07285	SM00487	DEAD-like helicases superfamily
SP_RS07285	SM00490	helicase superfamily c-terminal domain
SP_RS07385	SM00062	Bacterial periplasmic substrate-binding proteins
SP_RS07390	SM00382	ATPases associated with a variety of cellular activities
SP_RS07405	SM00028	Tetratricopeptide repeats
SP_RS07425	SM00382	ATPases associated with a variety of cellular activities
SP_RS07500	SM00487	DEAD-like helicases superfamily
SP_RS07500	SM00490	helicase superfamily c-terminal domain
SP_RS07515	SM00382	ATPases associated with a variety of cellular activities
SP_RS07555	SM01131	SP_RS07555
SP_RS07570	SM00316	Ribosomal protein S1-like RNA-binding domain
SP_RS07650	SM00831	Cation transporter/ATPase, N-terminus
SP_RS07660	SM00382	ATPases associated with a variety of cellular activities
SP_RS07735	SM00382	ATPases associated with a variety of cellular activities
SP_RS07735	SM00994	ClpX C4-type zinc finger
SP_RS07735	SM01086	C-terminal, D2-small domain, of ClpB protein
SP_RS07790	SM00382	ATPases associated with a variety of cellular activities
SP_RS07815	SM00487	DEAD-like helicases superfamily
SP_RS07815	SM00490	helicase superfamily c-terminal domain
SP_RS07965	SM00861	Transketolase, pyrimidine binding domain
SP_RS08000	SM01321	SP_RS08000
SP_RS08010	SM00563	Phosphate acyltransferases
SP_RS08020	SM01387	SP_RS08020
SP_RS08040	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SP_RS08045	SM00387	Histidine kinase-like ATPases
SP_RS08050	SM00448	cheY-homologous receiver domain
SP_RS08050	SM00862	Transcriptional regulatory protein, C terminal
SP_RS08075	SM00529	Helix-turn-helix diphteria tox regulatory element
SP_RS08075	SM00899	SP_RS08075
SP_RS08110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SP_RS08110	SM00954	Region found in RelA / SpoT proteins
SP_RS08125	SM00849	Metallo-beta-lactamase superfamily
SP_RS08135	SM00382	ATPases associated with a variety of cellular activities
SP_RS08160	SM00382	ATPases associated with a variety of cellular activities
SP_RS08170	SM00855	Phosphoglycerate mutase family
SP_RS08210	SM00363	S4 RNA-binding domain
SP_RS08230	SM00864	Tubulin/FtsZ family, GTPase domain
SP_RS08230	SM00865	Tubulin/FtsZ family, C-terminal domain
SP_RS08235	SM00842	Cell division protein FtsA
SP_RS08260	SM00493	SP_RS08260
SP_RS08280	SM01130	SP_RS08280
SP_RS08390	SM00487	DEAD-like helicases superfamily
SP_RS08390	SM00490	helicase superfamily c-terminal domain
SP_RS08395	SM01005	Alanine racemase, C-terminal domain
SP_RS08415	SM00957	SecA DEAD-like domain
SP_RS08415	SM00958	SecA preprotein cross-linking domain
SP_RS08425	SM00382	ATPases associated with a variety of cellular activities
SP_RS08475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SP_RS08480	SM00382	ATPases associated with a variety of cellular activities
SP_RS08495	SM00382	ATPases associated with a variety of cellular activities
SP_RS08530	SM00640	Glycosyl hydrolases family 32
SP_RS08535	SM00354	helix_turn _helix lactose operon repressor
SP_RS08570	SM00220	Serine/Threonine protein kinases, catalytic domain
SP_RS08570	SM00740	SP_RS08570
SP_RS08575	SM00331	Sigma factor PP2C-like phosphatases
SP_RS08575	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SP_RS08590	SM00487	DEAD-like helicases superfamily
SP_RS08590	SM00490	helicase superfamily c-terminal domain
SP_RS08595	SM01409	SP_RS08595
SP_RS08600	SM00072	Guanylate kinase homologues.
SP_RS08605	SM00322	K homology RNA-binding domain
SP_RS08605	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SP_RS08640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SP_RS08650	SM01103	SP_RS08650
SP_RS08710	SM00957	SecA DEAD-like domain
SP_RS08710	SM00958	SecA preprotein cross-linking domain
SP_RS08795	SM00347	helix_turn_helix multiple antibiotic resistance protein
SP_RS08885	SM00382	ATPases associated with a variety of cellular activities
SP_RS08910	SM00640	Glycosyl hydrolases family 32
SP_RS08930	SM00354	helix_turn _helix lactose operon repressor
SP_RS08980	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS09035	SM00354	helix_turn _helix lactose operon repressor
SP_RS09055	SM00382	ATPases associated with a variety of cellular activities
SP_RS09095	SM00710	Parallel beta-helix repeats
SP_RS09120	SM00382	ATPases associated with a variety of cellular activities
SP_RS09125	SM00382	ATPases associated with a variety of cellular activities
SP_RS09200	SM00354	helix_turn _helix lactose operon repressor
SP_RS09210	SM00422	helix_turn_helix, mercury resistance
SP_RS09235	SM00382	ATPases associated with a variety of cellular activities
SP_RS09245	SM00347	helix_turn_helix multiple antibiotic resistance protein
SP_RS09280	SM00382	ATPases associated with a variety of cellular activities
SP_RS09290	SM01234	SP_RS09290
SP_RS09295	SM00363	S4 RNA-binding domain
SP_RS09315	SM00116	Domain in cystathionine beta-synthase and other proteins.
SP_RS09345	SM00642	Alpha-amylase domain
SP_RS09355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SP_RS09355	SM00866	SP_RS09355
SP_RS09375	SM00382	ATPases associated with a variety of cellular activities
SP_RS09380	SM00382	ATPases associated with a variety of cellular activities
SP_RS09405	SM00642	Alpha-amylase domain
SP_RS09435	SM00342	helix_turn_helix, arabinose operon control protein
SP_RS09590	SM00883	Chaperonin 10 Kd subunit
SP_RS09635	SM00850	LytTr DNA-binding domain
SP_RS09640	SM00014	Acid phosphatase homologues
SP_RS09650	SM00382	ATPases associated with a variety of cellular activities
SP_RS09660	SM00347	helix_turn_helix multiple antibiotic resistance protein
SP_RS09740	SM00644	SP_RS09740
SP_RS09750	SM00382	ATPases associated with a variety of cellular activities
SP_RS09755	SM00852	Probable molybdopterin binding domain
SP_RS09780	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS09800	SM01260	SP_RS09800
SP_RS09815	SM00382	ATPases associated with a variety of cellular activities
SP_RS09835	SM00382	ATPases associated with a variety of cellular activities
SP_RS09845	SM00562	SP_RS09845
SP_RS09850	SM00663	RNA polymerase I subunit A N-terminus
SP_RS09865	SM01091	Transporter associated domain
SP_RS09870	SM00892	DNA/RNA non-specific endonuclease
SP_RS09920	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SP_RS09960	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SP_RS09975	SM00650	Ribosomal RNA adenine dimethylases
SP_RS09985	SM00382	ATPases associated with a variety of cellular activities
SP_RS10000	SM00493	SP_RS10000
SP_RS10040	SM00870	SP_RS10040
SP_RS10050	SM00354	helix_turn _helix lactose operon repressor
SP_RS10055	SM00421	helix_turn_helix, Lux Regulon
SP_RS10055	SM00448	cheY-homologous receiver domain
SP_RS10070	SM00382	ATPases associated with a variety of cellular activities
SP_RS10160	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SP_RS10160	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SP_RS10185	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SP_RS10220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SP_RS10220	SM00866	SP_RS10220
SP_RS10250	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SP_RS10255	SM00226	Low molecular weight phosphatase family
SP_RS10260	SM01323	SP_RS10260
SP_RS10265	SM00861	Transketolase, pyrimidine binding domain
SP_RS10280	SM01007	Class II Aldolase and Adducin N-terminal domain
SP_RS10290	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SP_RS10315	SM00393	Putative single-stranded nucleic acids-binding domain
SP_RS10315	SM01245	SP_RS10315
SP_RS10380	SM00382	ATPases associated with a variety of cellular activities
SP_RS10390	SM00829	Enoylreductase
SP_RS10425	SM00347	helix_turn_helix multiple antibiotic resistance protein
SP_RS10430	SM00257	Lysin motif
SP_RS10560	SM00382	ATPases associated with a variety of cellular activities
SP_RS10570	SM00382	ATPases associated with a variety of cellular activities
SP_RS10585	SM00836	DALR anticodon binding domain
SP_RS10585	SM01016	Arginyl tRNA synthetase N terminal dom
SP_RS10600	SM00448	cheY-homologous receiver domain
SP_RS10600	SM00862	Transcriptional regulatory protein, C terminal
SP_RS10605	SM00387	Histidine kinase-like ATPases
SP_RS10605	SM00388	His Kinase A (phosphoacceptor) domain
SP_RS10625	SM00382	ATPases associated with a variety of cellular activities
SP_RS10695	SM00363	S4 RNA-binding domain
SP_RS10765	SM00354	helix_turn _helix lactose operon repressor
SP_RS10810	SM00530	Helix-turn-helix XRE-family like proteins 
SP_RS10855	SM00861	Transketolase, pyrimidine binding domain
SP_RS10880	SM00244	prohibitin homologues
SP_RS10935	SM00872	Alpha mannosidase, middle domain
SP_RS10940	SM01149	SP_RS10940
SP_RS10950	SM00812	Alpha-L-fucosidase
SP_RS11000	SM00244	prohibitin homologues
SP_RS11015	SM00607	eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain
SP_RS11050	SM01007	Class II Aldolase and Adducin N-terminal domain
SP_RS11060	SM00420	helix_turn_helix, Deoxyribose operon repressor
SP_RS11060	SM01134	SP_RS11060
SP_RS11075	SM00382	ATPases associated with a variety of cellular activities
SP_RS11080	SM00347	helix_turn_helix multiple antibiotic resistance protein
SP_RS11080	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SP_RS11195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SP_RS11195	SM00387	Histidine kinase-like ATPases
SP_RS11195	SM00388	His Kinase A (phosphoacceptor) domain
SP_RS11200	SM00448	cheY-homologous receiver domain
SP_RS11200	SM00862	Transcriptional regulatory protein, C terminal
SP_RS11210	SM00382	ATPases associated with a variety of cellular activities
SP_RS11210	SM01086	C-terminal, D2-small domain, of ClpB protein
SP_RS11220	SM00382	ATPases associated with a variety of cellular activities
SP_RS11240	SM00287	Bacterial SH3 domain homologues
SP_RS11275	SM00487	DEAD-like helicases superfamily
SP_RS11275	SM00490	helicase superfamily c-terminal domain
SP_RS11335	SM00382	ATPases associated with a variety of cellular activities
SP_RS11340	SM00382	ATPases associated with a variety of cellular activities
SP_RS11375	SM00116	Domain in cystathionine beta-synthase and other proteins.
SP_RS11375	SM01240	SP_RS11375
SP_RS11385	SM00382	ATPases associated with a variety of cellular activities
SP_RS11425	SM00448	cheY-homologous receiver domain
SP_RS11425	SM00850	LytTr DNA-binding domain
SP_RS11450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SP_RS11455	SM00470	ParB-like nuclease domain
SP_RS11490	SM00382	ATPases associated with a variety of cellular activities
