locus-tag class description HMPREF1038_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix HMPREF1038_RS00010 PF00308 Bacterial dnaA protein HMPREF1038_RS00015 PF02767 DNA polymerase III beta subunit, central domain HMPREF1038_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain HMPREF1038_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain HMPREF1038_RS00025 PF06071 Protein of unknown function (DUF933) HMPREF1038_RS00025 PF01926 50S ribosome-binding GTPase HMPREF1038_RS00030 PF01195 Peptidyl-tRNA hydrolase HMPREF1038_RS00035 PF17757 UvrB interaction domain HMPREF1038_RS00035 PF03461 TRCF domain HMPREF1038_RS00035 PF02559 CarD-like/TRCF domain HMPREF1038_RS00035 PF00270 DEAD/DEAH box helicase HMPREF1038_RS00035 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS00040 PF01479 S4 domain HMPREF1038_RS00060 PF01171 PP-loop family HMPREF1038_RS00060 PF11734 TilS substrate C-terminal domain HMPREF1038_RS00065 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS00070 PF06480 FtsH Extracellular HMPREF1038_RS00070 PF17862 AAA+ lid domain HMPREF1038_RS00070 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF1038_RS00070 PF01434 Peptidase family M41 HMPREF1038_RS00140 PF00709 Adenylosuccinate synthetase HMPREF1038_RS00270 PF00589 Phage integrase family HMPREF1038_RS00400 PF01473 Putative cell wall binding repeat HMPREF1038_RS00400 PF01510 N-acetylmuramoyl-L-alanine amidase HMPREF1038_RS00410 PF14437 MafB19-like deaminase HMPREF1038_RS00415 PF00692 dUTPase HMPREF1038_RS00430 PF00484 Carbonic anhydrase HMPREF1038_RS00445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HMPREF1038_RS00445 PF14572 Phosphoribosyl synthetase-associated domain HMPREF1038_RS00465 PF01367 5'-3' exonuclease, C-terminal SAM fold HMPREF1038_RS00465 PF00476 DNA polymerase family A HMPREF1038_RS00465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HMPREF1038_RS00470 PF13380 CoA binding domain HMPREF1038_RS00480 PF03601 Conserved hypothetical protein 698 HMPREF1038_RS00485 PF00155 Aminotransferase class I and II HMPREF1038_RS00490 PF11967 Recombination protein O N terminal HMPREF1038_RS00490 PF02565 Recombination protein O C terminal HMPREF1038_RS00495 PF02504 Fatty acid synthesis protein HMPREF1038_RS00500 PF00550 Phosphopantetheine attachment site HMPREF1038_RS00525 PF03412 Peptidase C39 family HMPREF1038_RS00525 PF00005 ABC transporter HMPREF1038_RS00525 PF00664 ABC transporter transmembrane region HMPREF1038_RS00535 PF01259 SAICAR synthetase HMPREF1038_RS00540 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HMPREF1038_RS00540 PF00586 AIR synthase related protein, N-terminal domain HMPREF1038_RS00540 PF02769 AIR synthase related protein, C-terminal domain HMPREF1038_RS00545 PF13537 Glutamine amidotransferase domain HMPREF1038_RS00545 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS00550 PF00586 AIR synthase related protein, N-terminal domain HMPREF1038_RS00550 PF02769 AIR synthase related protein, C-terminal domain HMPREF1038_RS00555 PF00551 Formyl transferase HMPREF1038_RS00560 PF04892 VanZ like family HMPREF1038_RS00565 PF01808 AICARFT/IMPCHase bienzyme HMPREF1038_RS00565 PF02142 MGS-like domain HMPREF1038_RS00570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HMPREF1038_RS00570 PF02843 Phosphoribosylglycinamide synthetase, C domain HMPREF1038_RS00570 PF02844 Phosphoribosylglycinamide synthetase, N domain HMPREF1038_RS00575 PF00731 AIR carboxylase HMPREF1038_RS00580 PF02222 ATP-grasp domain HMPREF1038_RS00580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF1038_RS00580 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HMPREF1038_RS00590 PF00206 Lyase HMPREF1038_RS00590 PF10397 Adenylosuccinate lyase C-terminus HMPREF1038_RS00595 PF04650 YSIRK type signal peptide HMPREF1038_RS00595 PF00746 LPXTG cell wall anchor motif HMPREF1038_RS00595 PF00728 Glycosyl hydrolase family 20, catalytic domain HMPREF1038_RS00595 PF07501 G5 domain HMPREF1038_RS00600 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS00600 PF07702 UTRA domain HMPREF1038_RS00605 PF01301 Glycosyl hydrolases family 35 HMPREF1038_RS00610 PF03830 PTS system sorbose subfamily IIB component HMPREF1038_RS00615 PF03609 PTS system sorbose-specific iic component HMPREF1038_RS00620 PF03613 PTS system mannose/fructose/sorbose family IID component HMPREF1038_RS00630 PF01380 SIS domain HMPREF1038_RS00635 PF01263 Aldose 1-epimerase HMPREF1038_RS00640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HMPREF1038_RS00645 PF02583 Metal-sensitive transcriptional repressor HMPREF1038_RS00670 PF02386 Cation transport protein HMPREF1038_RS00675 PF02254 TrkA-N domain HMPREF1038_RS00675 PF02080 TrkA-C domain HMPREF1038_RS00685 PF00535 Glycosyl transferase family 2 HMPREF1038_RS00705 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS00705 PF00072 Response regulator receiver domain HMPREF1038_RS00710 PF00512 His Kinase A (phospho-acceptor) domain HMPREF1038_RS00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS00715 PF00163 Ribosomal protein S4/S9 N-terminal domain HMPREF1038_RS00715 PF01479 S4 domain HMPREF1038_RS00735 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS00740 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS00745 PF12010 Domain of unknown function (DUF3502) HMPREF1038_RS00750 PF00581 Rhodanese-like domain HMPREF1038_RS00750 PF17773 UPF0176 acylphosphatase like domain HMPREF1038_RS00750 PF12368 Rhodanase C-terminal HMPREF1038_RS00775 PF03551 Transcriptional regulator PadR-like family HMPREF1038_RS00775 PF10400 Virulence activator alpha C-term HMPREF1038_RS00790 PF02719 Polysaccharide biosynthesis protein HMPREF1038_RS00800 PF13419 Haloacid dehalogenase-like hydrolase HMPREF1038_RS00805 PF03313 Serine dehydratase alpha chain HMPREF1038_RS00810 PF03315 Serine dehydratase beta chain HMPREF1038_RS00810 PF01842 ACT domain HMPREF1038_RS00835 PF12704 MacB-like periplasmic core domain HMPREF1038_RS00835 PF02687 FtsX-like permease family HMPREF1038_RS00835 PF00005 ABC transporter HMPREF1038_RS00840 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS00845 PF00764 Arginosuccinate synthase HMPREF1038_RS00920 PF00293 NUDIX domain HMPREF1038_RS00920 PF09297 NADH pyrophosphatase zinc ribbon domain HMPREF1038_RS00925 PF01134 Glucose inhibited division protein A HMPREF1038_RS00925 PF13932 GidA associated domain HMPREF1038_RS00935 PF17770 Ribonuclease J C-terminal domain HMPREF1038_RS00935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HMPREF1038_RS00935 PF00753 Metallo-beta-lactamase superfamily HMPREF1038_RS00940 PF07288 Protein of unknown function (DUF1447) HMPREF1038_RS00960 PF00814 Glycoprotease family HMPREF1038_RS00970 PF00814 Glycoprotease family HMPREF1038_RS00975 PF13683 Integrase core domain HMPREF1038_RS00975 PF01610 Transposase HMPREF1038_RS01010 PF00535 Glycosyl transferase family 2 HMPREF1038_RS01015 PF00005 ABC transporter HMPREF1038_RS01015 PF00664 ABC transporter transmembrane region HMPREF1038_RS01015 PF03412 Peptidase C39 family HMPREF1038_RS01050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HMPREF1038_RS01050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HMPREF1038_RS01050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HMPREF1038_RS01055 PF01381 Helix-turn-helix HMPREF1038_RS01085 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS01090 PF03180 NLPA lipoprotein HMPREF1038_RS01095 PF01546 Peptidase family M20/M25/M40 HMPREF1038_RS01095 PF07687 Peptidase dimerisation domain HMPREF1038_RS01100 PF09383 NIL domain HMPREF1038_RS01100 PF00005 ABC transporter HMPREF1038_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS01120 PF06580 Histidine kinase HMPREF1038_RS01120 PF02743 Cache domain HMPREF1038_RS01120 PF00672 HAMP domain HMPREF1038_RS01125 PF00072 Response regulator receiver domain HMPREF1038_RS01125 PF12833 Helix-turn-helix domain HMPREF1038_RS01135 PF07972 NrdI Flavodoxin like HMPREF1038_RS01150 PF04397 LytTr DNA-binding domain HMPREF1038_RS01155 PF08676 MutL C terminal dimerisation domain HMPREF1038_RS01155 PF01119 DNA mismatch repair protein, C-terminal domain HMPREF1038_RS01160 PF00885 6,7-dimethyl-8-ribityllumazine synthase HMPREF1038_RS01165 PF00925 GTP cyclohydrolase II HMPREF1038_RS01165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HMPREF1038_RS01170 PF00677 Lumazine binding domain HMPREF1038_RS01175 PF01872 RibD C-terminal domain HMPREF1038_RS01175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HMPREF1038_RS01180 PF07499 RuvA, C-terminal domain HMPREF1038_RS01180 PF01330 RuvA N terminal domain HMPREF1038_RS01185 PF03352 Methyladenine glycosylase HMPREF1038_RS01210 PF17760 UvrA interaction domain HMPREF1038_RS01210 PF17755 UvrA DNA-binding domain HMPREF1038_RS01210 PF00005 ABC transporter HMPREF1038_RS01215 PF01321 Creatinase/Prolidase N-terminal domain HMPREF1038_RS01215 PF00557 Metallopeptidase family M24 HMPREF1038_RS01220 PF03960 ArsC family HMPREF1038_RS01230 PF06135 IreB regulatory phosphoprotein HMPREF1038_RS01235 PF03652 Holliday junction resolvase HMPREF1038_RS01240 PF06949 Protein of unknown function (DUF1292) HMPREF1038_RS01245 PF08245 Mur ligase middle domain HMPREF1038_RS01245 PF02875 Mur ligase family, glutamate ligase domain HMPREF1038_RS01255 PF13091 PLD-like domain HMPREF1038_RS01270 PF03477 ATP cone domain HMPREF1038_RS01270 PF13597 Anaerobic ribonucleoside-triphosphate reductase HMPREF1038_RS01295 PF00338 Ribosomal protein S10p/S20e HMPREF1038_RS01300 PF00297 Ribosomal protein L3 HMPREF1038_RS01305 PF00573 Ribosomal protein L4/L1 family HMPREF1038_RS01310 PF00276 Ribosomal protein L23 HMPREF1038_RS01315 PF03947 Ribosomal Proteins L2, C-terminal domain HMPREF1038_RS01315 PF00181 Ribosomal Proteins L2, RNA binding domain HMPREF1038_RS01320 PF00203 Ribosomal protein S19 HMPREF1038_RS01325 PF00237 Ribosomal protein L22p/L17e HMPREF1038_RS01330 PF07650 KH domain HMPREF1038_RS01330 PF00189 Ribosomal protein S3, C-terminal domain HMPREF1038_RS01335 PF00252 Ribosomal protein L16p/L10e HMPREF1038_RS01340 PF00831 Ribosomal L29 protein HMPREF1038_RS01345 PF00366 Ribosomal protein S17 HMPREF1038_RS01350 PF00238 Ribosomal protein L14p/L23e HMPREF1038_RS01355 PF00467 KOW motif HMPREF1038_RS01355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HMPREF1038_RS01360 PF00281 Ribosomal protein L5 HMPREF1038_RS01360 PF00673 ribosomal L5P family C-terminus HMPREF1038_RS01365 PF00253 Ribosomal protein S14p/S29e HMPREF1038_RS01370 PF00410 Ribosomal protein S8 HMPREF1038_RS01375 PF00347 Ribosomal protein L6 HMPREF1038_RS01380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HMPREF1038_RS01385 PF00333 Ribosomal protein S5, N-terminal domain HMPREF1038_RS01385 PF03719 Ribosomal protein S5, C-terminal domain HMPREF1038_RS01390 PF00327 Ribosomal protein L30p/L7e HMPREF1038_RS01395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HMPREF1038_RS01400 PF00344 SecY translocase HMPREF1038_RS01410 PF01176 Translation initiation factor 1A / IF-1 HMPREF1038_RS01415 PF00444 Ribosomal protein L36 HMPREF1038_RS01420 PF00416 Ribosomal protein S13/S18 HMPREF1038_RS01425 PF00411 Ribosomal protein S11 HMPREF1038_RS01430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HMPREF1038_RS01430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HMPREF1038_RS01430 PF01000 RNA polymerase Rpb3/RpoA insert domain HMPREF1038_RS01435 PF01196 Ribosomal protein L17 HMPREF1038_RS01445 PF05167 Uncharacterised ACR (DUF711) HMPREF1038_RS01455 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS01480 PF04055 Radical SAM superfamily HMPREF1038_RS01485 PF00455 DeoR C terminal sensor domain HMPREF1038_RS01485 PF08220 DeoR-like helix-turn-helix domain HMPREF1038_RS01490 PF13936 Helix-turn-helix domain HMPREF1038_RS01490 PF04198 Putative sugar-binding domain HMPREF1038_RS01495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HMPREF1038_RS01500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS01505 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS01510 PF01228 Glycine radical HMPREF1038_RS01510 PF02901 Pyruvate formate lyase-like HMPREF1038_RS01515 PF00923 Transaldolase/Fructose-6-phosphate aldolase HMPREF1038_RS01520 PF00465 Iron-containing alcohol dehydrogenase HMPREF1038_RS01525 PF08264 Anticodon-binding domain of tRNA HMPREF1038_RS01525 PF09334 tRNA synthetases class I (M) HMPREF1038_RS01525 PF13603 Leucyl-tRNA synthetase, Domain 2 HMPREF1038_RS01525 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF1038_RS01545 PF05496 Holliday junction DNA helicase RuvB P-loop domain HMPREF1038_RS01545 PF05491 RuvB C-terminal winged helix domain HMPREF1038_RS01545 PF17864 RuvB AAA lid domain HMPREF1038_RS01555 PF01255 Putative undecaprenyl diphosphate synthase HMPREF1038_RS01565 PF02163 Peptidase family M50 HMPREF1038_RS01570 PF04073 Aminoacyl-tRNA editing domain HMPREF1038_RS01570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF1038_RS01570 PF03129 Anticodon binding domain HMPREF1038_RS01575 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS01580 PF01380 SIS domain HMPREF1038_RS01595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF1038_RS01595 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS01595 PF03714 Bacterial pullanase-associated domain HMPREF1038_RS01600 PF00164 Ribosomal protein S12/S23 HMPREF1038_RS01605 PF00177 Ribosomal protein S7p/S5e HMPREF1038_RS01610 PF00679 Elongation factor G C-terminus HMPREF1038_RS01610 PF00009 Elongation factor Tu GTP binding domain HMPREF1038_RS01610 PF03144 Elongation factor Tu domain 2 HMPREF1038_RS01610 PF03764 Elongation factor G, domain IV HMPREF1038_RS01610 PF14492 Elongation Factor G, domain II HMPREF1038_RS01615 PF11490 DNA polymerase III polC-type N-terminus II HMPREF1038_RS01615 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF1038_RS01615 PF00929 Exonuclease HMPREF1038_RS01615 PF02811 PHP domain HMPREF1038_RS01615 PF14480 DNA polymerase III polC-type N-terminus I HMPREF1038_RS01615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF1038_RS01635 PF02073 Thermophilic metalloprotease (M29) HMPREF1038_RS01640 PF04226 Transglycosylase associated protein HMPREF1038_RS01650 PF01479 S4 domain HMPREF1038_RS01650 PF00849 RNA pseudouridylate synthase HMPREF1038_RS01660 PF03051 Peptidase C1-like family HMPREF1038_RS01665 PF03613 PTS system mannose/fructose/sorbose family IID component HMPREF1038_RS01670 PF03609 PTS system sorbose-specific iic component HMPREF1038_RS01675 PF03830 PTS system sorbose subfamily IIB component HMPREF1038_RS01675 PF03610 PTS system fructose IIA component HMPREF1038_RS01680 PF00107 Zinc-binding dehydrogenase HMPREF1038_RS01680 PF08240 Alcohol dehydrogenase GroES-like domain HMPREF1038_RS01690 PF00860 Permease family HMPREF1038_RS01700 PF00809 Pterin binding enzyme HMPREF1038_RS01705 PF02875 Mur ligase family, glutamate ligase domain HMPREF1038_RS01705 PF08245 Mur ligase middle domain HMPREF1038_RS01710 PF01227 GTP cyclohydrolase I HMPREF1038_RS01715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HMPREF1038_RS01715 PF02152 Dihydroneopterin aldolase HMPREF1038_RS01725 PF00572 Ribosomal protein L13 HMPREF1038_RS01730 PF00380 Ribosomal protein S9/S16 HMPREF1038_RS01745 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS01750 PF04193 PQ loop repeat HMPREF1038_RS01755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS01760 PF05043 Mga helix-turn-helix domain HMPREF1038_RS01760 PF00874 PRD domain HMPREF1038_RS01760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF1038_RS01760 PF08279 HTH domain HMPREF1038_RS01765 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HMPREF1038_RS01775 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS01785 PF17137 Domain of unknown function (DUF5110) HMPREF1038_RS01785 PF13802 Galactose mutarotase-like HMPREF1038_RS01785 PF01055 Glycosyl hydrolases family 31 HMPREF1038_RS01785 PF16338 Domain of unknown function (DUF4968) HMPREF1038_RS01790 PF00255 Glutathione peroxidase HMPREF1038_RS01795 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain HMPREF1038_RS01795 PF02278 Polysaccharide lyase family 8, super-sandwich domain HMPREF1038_RS01795 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain HMPREF1038_RS01800 PF01797 Transposase IS200 like HMPREF1038_RS01810 PF00294 pfkB family carbohydrate kinase HMPREF1038_RS01830 PF07470 Glycosyl Hydrolase Family 88 HMPREF1038_RS01835 PF03830 PTS system sorbose subfamily IIB component HMPREF1038_RS01840 PF03609 PTS system sorbose-specific iic component HMPREF1038_RS01845 PF03613 PTS system mannose/fructose/sorbose family IID component HMPREF1038_RS01860 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS01885 PF01795 MraW methylase family HMPREF1038_RS01895 PF00905 Penicillin binding protein transpeptidase domain HMPREF1038_RS01895 PF03793 PASTA domain HMPREF1038_RS01895 PF03717 Penicillin-binding Protein dimerisation domain HMPREF1038_RS01900 PF00953 Glycosyl transferase family 4 HMPREF1038_RS01900 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HMPREF1038_RS01905 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF1038_RS01905 PF17871 AAA lid domain HMPREF1038_RS01905 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF1038_RS01905 PF07724 AAA domain (Cdc48 subfamily) HMPREF1038_RS01915 PF02664 S-Ribosylhomocysteinase (LuxS) HMPREF1038_RS01920 PF08903 Domain of unknown function (DUF1846) HMPREF1038_RS01925 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS01925 PF16657 Maltogenic Amylase, C-terminal domain HMPREF1038_RS01930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF1038_RS01970 PF02706 Chain length determinant protein HMPREF1038_RS01975 PF13614 AAA domain HMPREF1038_RS01990 PF00534 Glycosyl transferases group 1 HMPREF1038_RS02005 PF01370 NAD dependent epimerase/dehydratase family HMPREF1038_RS02010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HMPREF1038_RS02010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HMPREF1038_RS02010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HMPREF1038_RS02030 PF00483 Nucleotidyl transferase HMPREF1038_RS02035 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HMPREF1038_RS02040 PF16363 GDP-mannose 4,6 dehydratase HMPREF1038_RS02055 PF13005 zinc-finger binding domain of transposase IS66 HMPREF1038_RS02055 PF13007 Transposase C of IS166 homeodomain HMPREF1038_RS02055 PF13817 IS66 C-terminal element HMPREF1038_RS02055 PF03050 Transposase IS66 family HMPREF1038_RS02060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF1038_RS02065 PF12905 Endo-alpha-N-acetylgalactosaminidase HMPREF1038_RS02065 PF17451 Glycosyl hydrolase 101 beta sandwich domain HMPREF1038_RS02065 PF04650 YSIRK type signal peptide HMPREF1038_RS02065 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal HMPREF1038_RS02065 PF17974 Galactose-binding domain-like HMPREF1038_RS02065 PF18080 Galactose mutarotase-like fold domain HMPREF1038_RS02065 PF00754 F5/8 type C domain HMPREF1038_RS02070 PF00912 Transglycosylase HMPREF1038_RS02070 PF00905 Penicillin binding protein transpeptidase domain HMPREF1038_RS02075 PF03838 Recombination protein U HMPREF1038_RS02080 PF06908 YspA SLOG family HMPREF1038_RS02085 PF05103 DivIVA protein HMPREF1038_RS02095 PF01170 Putative RNA methylase family UPF0020 HMPREF1038_RS02095 PF02926 THUMP domain HMPREF1038_RS02100 PF18041 MapZ extracellular domain 1 HMPREF1038_RS02100 PF18708 MapZ extracellular C-terminal domain 2 HMPREF1038_RS02105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HMPREF1038_RS02105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF1038_RS02110 PF00072 Response regulator receiver domain HMPREF1038_RS02110 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS02135 PF00288 GHMP kinases N terminal domain HMPREF1038_RS02135 PF10509 Galactokinase galactose-binding signature HMPREF1038_RS02135 PF08544 GHMP kinases C terminal HMPREF1038_RS02145 PF00288 GHMP kinases N terminal domain HMPREF1038_RS02145 PF08544 GHMP kinases C terminal HMPREF1038_RS02150 PF01070 FMN-dependent dehydrogenase HMPREF1038_RS02160 PF07730 Histidine kinase HMPREF1038_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS02165 PF00072 Response regulator receiver domain HMPREF1038_RS02165 PF00196 Bacterial regulatory proteins, luxR family HMPREF1038_RS02195 PF00589 Phage integrase family HMPREF1038_RS02195 PF14659 Phage integrase, N-terminal SAM-like domain HMPREF1038_RS02200 PF05697 Bacterial trigger factor protein (TF) HMPREF1038_RS02200 PF05698 Bacterial trigger factor protein (TF) C-terminus HMPREF1038_RS02200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HMPREF1038_RS02205 PF14490 Helix-hairpin-helix containing domain HMPREF1038_RS02205 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HMPREF1038_RS02205 PF13538 UvrD-like helicase C-terminal domain HMPREF1038_RS02210 PF10502 Signal peptidase, peptidase S26 HMPREF1038_RS02215 PF11858 Domain of unknown function (DUF3378) HMPREF1038_RS02215 PF01351 Ribonuclease HII HMPREF1038_RS02230 PF00488 MutS domain V HMPREF1038_RS02230 PF01713 Smr domain HMPREF1038_RS02235 PF01235 Sodium:alanine symporter family HMPREF1038_RS02250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF1038_RS02250 PF02403 Seryl-tRNA synthetase N-terminal domain HMPREF1038_RS02260 PF13840 ACT domain HMPREF1038_RS02260 PF00696 Amino acid kinase family HMPREF1038_RS02265 PF00378 Enoyl-CoA hydratase/isomerase HMPREF1038_RS02270 PF01047 MarR family HMPREF1038_RS02275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMPREF1038_RS02275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMPREF1038_RS02280 PF00550 Phosphopantetheine attachment site HMPREF1038_RS02285 PF03060 Nitronate monooxygenase HMPREF1038_RS02290 PF00698 Acyl transferase domain HMPREF1038_RS02300 PF00109 Beta-ketoacyl synthase, N-terminal domain HMPREF1038_RS02300 PF02801 Beta-ketoacyl synthase, C-terminal domain HMPREF1038_RS02305 PF00364 Biotin-requiring enzyme HMPREF1038_RS02310 PF07977 FabA-like domain HMPREF1038_RS02315 PF02785 Biotin carboxylase C-terminal domain HMPREF1038_RS02315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HMPREF1038_RS02315 PF00289 Biotin carboxylase, N-terminal domain HMPREF1038_RS02320 PF01039 Carboxyl transferase domain HMPREF1038_RS02325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HMPREF1038_RS02345 PF01029 NusB family HMPREF1038_RS02350 PF03780 Asp23 family, cell envelope-related function HMPREF1038_RS02355 PF01132 Elongation factor P (EF-P) OB domain HMPREF1038_RS02355 PF08207 Elongation factor P (EF-P) KOW-like domain HMPREF1038_RS02355 PF09285 Elongation factor P, C-terminal HMPREF1038_RS02360 PF02637 GatB domain HMPREF1038_RS02360 PF02934 GatB/GatE catalytic domain HMPREF1038_RS02365 PF01425 Amidase HMPREF1038_RS02370 PF02686 Glu-tRNAGln amidotransferase C subunit HMPREF1038_RS02375 PF16658 Class II release factor RF3, C-terminal domain HMPREF1038_RS02375 PF03144 Elongation factor Tu domain 2 HMPREF1038_RS02375 PF00009 Elongation factor Tu GTP binding domain HMPREF1038_RS02385 PF00830 Ribosomal L28 family HMPREF1038_RS02390 PF03780 Asp23 family, cell envelope-related function HMPREF1038_RS02395 PF02734 DAK2 domain HMPREF1038_RS02395 PF13684 Dihydroxyacetone kinase family HMPREF1038_RS02400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HMPREF1038_RS02400 PF00205 Thiamine pyrophosphate enzyme, central domain HMPREF1038_RS02400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMPREF1038_RS02405 PF01842 ACT domain HMPREF1038_RS02405 PF10369 Small subunit of acetolactate synthase HMPREF1038_RS02410 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HMPREF1038_RS02410 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HMPREF1038_RS02425 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF1038_RS02425 PF00585 C-terminal regulatory domain of Threonine dehydratase HMPREF1038_RS02435 PF00005 ABC transporter HMPREF1038_RS02440 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS02465 PF02673 Bacitracin resistance protein BacA HMPREF1038_RS02470 PF11798 IMS family HHH motif HMPREF1038_RS02470 PF11799 impB/mucB/samB family C-terminal domain HMPREF1038_RS02470 PF00817 impB/mucB/samB family HMPREF1038_RS02475 PF01228 Glycine radical HMPREF1038_RS02475 PF02901 Pyruvate formate lyase-like HMPREF1038_RS02505 PF00480 ROK family HMPREF1038_RS02510 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS02520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HMPREF1038_RS02525 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS02530 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS02530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS02535 PF02386 Cation transport protein HMPREF1038_RS02540 PF02080 TrkA-C domain HMPREF1038_RS02540 PF02254 TrkA-N domain HMPREF1038_RS02550 PF07155 ECF-type riboflavin transporter, S component HMPREF1038_RS02560 PF12558 ATP-binding cassette cobalt transporter HMPREF1038_RS02560 PF00005 ABC transporter HMPREF1038_RS02570 PF00588 SpoU rRNA Methylase family HMPREF1038_RS02575 PF12822 ECF transporter, substrate-specific component HMPREF1038_RS02580 PF01569 PAP2 superfamily HMPREF1038_RS02590 PF00583 Acetyltransferase (GNAT) family HMPREF1038_RS02595 PF05066 HB1, ASXL, restriction endonuclease HTH domain HMPREF1038_RS02605 PF00117 Glutamine amidotransferase class-I HMPREF1038_RS02605 PF06418 CTP synthase N-terminus HMPREF1038_RS02610 PF02690 Na+/Pi-cotransporter HMPREF1038_RS02620 PF00162 Phosphoglycerate kinase HMPREF1038_RS02625 PF06081 Aromatic acid exporter family member 1 HMPREF1038_RS02630 PF13411 MerR HTH family regulatory protein HMPREF1038_RS02635 PF00120 Glutamine synthetase, catalytic domain HMPREF1038_RS02635 PF03951 Glutamine synthetase, beta-Grasp domain HMPREF1038_RS02645 PF01420 Type I restriction modification DNA specificity domain HMPREF1038_RS02650 PF00589 Phage integrase family HMPREF1038_RS02650 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF1038_RS02660 PF01420 Type I restriction modification DNA specificity domain HMPREF1038_RS02665 PF02384 N-6 DNA Methylase HMPREF1038_RS02665 PF12161 HsdM N-terminal domain HMPREF1038_RS02670 PF04851 Type III restriction enzyme, res subunit HMPREF1038_RS02670 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HMPREF1038_RS02670 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS02670 PF08463 EcoEI R protein C-terminal HMPREF1038_RS02685 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HMPREF1038_RS02685 PF01628 HrcA protein C terminal domain HMPREF1038_RS02690 PF01025 GrpE HMPREF1038_RS02695 PF00012 Hsp70 protein HMPREF1038_RS02705 PF00684 DnaJ central domain HMPREF1038_RS02705 PF01556 DnaJ C terminal domain HMPREF1038_RS02705 PF00226 DnaJ domain HMPREF1038_RS02715 PF01230 HIT domain HMPREF1038_RS02720 PF00005 ABC transporter HMPREF1038_RS02745 PF00989 PAS fold HMPREF1038_RS02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS02745 PF17203 Single cache domain 3 HMPREF1038_RS02745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HMPREF1038_RS02760 PF03412 Peptidase C39 family HMPREF1038_RS02760 PF00005 ABC transporter HMPREF1038_RS02760 PF00664 ABC transporter transmembrane region HMPREF1038_RS02820 PF02517 CPBP intramembrane metalloprotease HMPREF1038_RS02830 PF02390 Putative methyltransferase HMPREF1038_RS02835 PF17384 RimP C-terminal SH3 domain HMPREF1038_RS02835 PF02576 RimP N-terminal domain HMPREF1038_RS02840 PF00575 S1 RNA binding domain HMPREF1038_RS02840 PF08529 NusA N-terminal domain HMPREF1038_RS02840 PF13184 NusA-like KH domain HMPREF1038_RS02845 PF04296 Protein of unknown function (DUF448) HMPREF1038_RS02850 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HMPREF1038_RS02855 PF04760 Translation initiation factor IF-2, N-terminal region HMPREF1038_RS02855 PF00009 Elongation factor Tu GTP binding domain HMPREF1038_RS02855 PF11987 Translation-initiation factor 2 HMPREF1038_RS02860 PF02033 Ribosome-binding factor A HMPREF1038_RS02905 PF13673 Acetyltransferase (GNAT) domain HMPREF1038_RS02905 PF00117 Glutamine amidotransferase class-I HMPREF1038_RS02905 PF13302 Acetyltransferase (GNAT) domain HMPREF1038_RS02905 PF00958 GMP synthase C terminal domain HMPREF1038_RS02905 PF03352 Methyladenine glycosylase HMPREF1038_RS02915 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF1038_RS02915 PF10458 Valyl tRNA synthetase tRNA binding arm HMPREF1038_RS02915 PF08264 Anticodon-binding domain of tRNA HMPREF1038_RS02925 PF02661 Fic/DOC family HMPREF1038_RS02925 PF17841 BID domain of Bartonella effector protein (Bep) HMPREF1038_RS02930 PF13333 Integrase core domain HMPREF1038_RS02930 PF00665 Integrase core domain HMPREF1038_RS02965 PF00874 PRD domain HMPREF1038_RS02965 PF03123 CAT RNA binding domain HMPREF1038_RS02970 PF00367 phosphotransferase system, EIIB HMPREF1038_RS02970 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS02970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF1038_RS02975 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS02980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HMPREF1038_RS02980 PF01409 tRNA synthetases class II core domain (F) HMPREF1038_RS02985 PF00583 Acetyltransferase (GNAT) family HMPREF1038_RS02990 PF03147 Ferredoxin-fold anticodon binding domain HMPREF1038_RS02990 PF03484 tRNA synthetase B5 domain HMPREF1038_RS02990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HMPREF1038_RS02990 PF03483 B3/4 domain HMPREF1038_RS02990 PF01588 Putative tRNA binding domain HMPREF1038_RS03010 PF01381 Helix-turn-helix HMPREF1038_RS03015 PF08267 Cobalamin-independent synthase, N-terminal domain HMPREF1038_RS03015 PF01717 Cobalamin-independent synthase, Catalytic domain HMPREF1038_RS03020 PF02219 Methylenetetrahydrofolate reductase HMPREF1038_RS03030 PF01138 3' exoribonuclease family, domain 1 HMPREF1038_RS03030 PF00013 KH domain HMPREF1038_RS03030 PF00575 S1 RNA binding domain HMPREF1038_RS03030 PF03725 3' exoribonuclease family, domain 2 HMPREF1038_RS03030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HMPREF1038_RS03035 PF06426 Serine acetyltransferase, N-terminal HMPREF1038_RS03035 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF1038_RS03045 PF09190 DALR domain HMPREF1038_RS03045 PF01406 tRNA synthetases class I (C) catalytic domain HMPREF1038_RS03050 PF00636 Ribonuclease III domain HMPREF1038_RS03055 PF13556 PucR C-terminal helix-turn-helix domain HMPREF1038_RS03070 PF02687 FtsX-like permease family HMPREF1038_RS03070 PF12704 MacB-like periplasmic core domain HMPREF1038_RS03075 PF00005 ABC transporter HMPREF1038_RS03080 PF12704 MacB-like periplasmic core domain HMPREF1038_RS03080 PF02687 FtsX-like permease family HMPREF1038_RS03085 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS03085 PF00072 Response regulator receiver domain HMPREF1038_RS03090 PF00672 HAMP domain HMPREF1038_RS03090 PF00512 His Kinase A (phospho-acceptor) domain HMPREF1038_RS03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS03095 PF01116 Fructose-bisphosphate aldolase class-II HMPREF1038_RS03100 PF00970 Oxidoreductase FAD-binding domain HMPREF1038_RS03100 PF00111 2Fe-2S iron-sulfur cluster binding domain HMPREF1038_RS03100 PF00175 Oxidoreductase NAD-binding domain HMPREF1038_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS03115 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS03120 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS03125 PF00005 ABC transporter HMPREF1038_RS03130 PF17768 RecJ OB domain HMPREF1038_RS03130 PF02272 DHHA1 domain HMPREF1038_RS03130 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HMPREF1038_RS03130 PF01368 DHH family HMPREF1038_RS03135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HMPREF1038_RS03135 PF00753 Metallo-beta-lactamase superfamily HMPREF1038_RS03135 PF17770 Ribonuclease J C-terminal domain HMPREF1038_RS03140 PF00756 Putative esterase HMPREF1038_RS03160 PF08459 UvrC Helix-hairpin-helix N-terminal HMPREF1038_RS03160 PF02151 UvrB/uvrC motif HMPREF1038_RS03160 PF01541 GIY-YIG catalytic domain HMPREF1038_RS03170 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS03175 PF00881 Nitroreductase family HMPREF1038_RS03180 PF01546 Peptidase family M20/M25/M40 HMPREF1038_RS03185 PF03167 Uracil DNA glycosylase superfamily HMPREF1038_RS03195 PF05525 Branched-chain amino acid transport protein HMPREF1038_RS03200 PF05343 M42 glutamyl aminopeptidase HMPREF1038_RS03225 PF00298 Ribosomal protein L11, RNA binding domain HMPREF1038_RS03225 PF03946 Ribosomal protein L11, N-terminal domain HMPREF1038_RS03230 PF00687 Ribosomal protein L1p/L10e family HMPREF1038_RS03245 PF00005 ABC transporter HMPREF1038_RS03280 PF00082 Subtilase family HMPREF1038_RS03300 PF03611 PTS system sugar-specific permease component HMPREF1038_RS03310 PF16355 Domain of unknown function (DUF4982) HMPREF1038_RS03310 PF00703 Glycosyl hydrolases family 2 HMPREF1038_RS03310 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HMPREF1038_RS03310 PF02837 Glycosyl hydrolases family 2, sugar binding domain HMPREF1038_RS03310 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HMPREF1038_RS03330 PF04055 Radical SAM superfamily HMPREF1038_RS03330 PF16199 Radical_SAM C-terminal domain HMPREF1038_RS03335 PF04055 Radical SAM superfamily HMPREF1038_RS03335 PF16199 Radical_SAM C-terminal domain HMPREF1038_RS03340 PF06962 Putative rRNA methylase HMPREF1038_RS03350 PF00999 Sodium/hydrogen exchanger family HMPREF1038_RS03365 PF02683 Cytochrome C biogenesis protein transmembrane region HMPREF1038_RS03370 PF08534 Redoxin HMPREF1038_RS03375 PF01641 SelR domain HMPREF1038_RS03375 PF01625 Peptide methionine sulfoxide reductase HMPREF1038_RS03380 PF00072 Response regulator receiver domain HMPREF1038_RS03380 PF12833 Helix-turn-helix domain HMPREF1038_RS03385 PF02743 Cache domain HMPREF1038_RS03385 PF00672 HAMP domain HMPREF1038_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS03385 PF06580 Histidine kinase HMPREF1038_RS03390 PF04260 Protein of unknown function (DUF436) HMPREF1038_RS03395 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region HMPREF1038_RS03395 PF00746 LPXTG cell wall anchor motif HMPREF1038_RS03395 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region HMPREF1038_RS03400 PF00425 chorismate binding enzyme HMPREF1038_RS03400 PF04715 Anthranilate synthase component I, N terminal region HMPREF1038_RS03415 PF00480 ROK family HMPREF1038_RS03420 PF00303 Thymidylate synthase HMPREF1038_RS03435 PF01926 50S ribosome-binding GTPase HMPREF1038_RS03435 PF13167 GTP-binding GTPase N-terminal HMPREF1038_RS03435 PF16360 GTP-binding GTPase Middle Region HMPREF1038_RS03440 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HMPREF1038_RS03440 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HMPREF1038_RS03445 PF12706 Beta-lactamase superfamily domain HMPREF1038_RS03445 PF00753 Metallo-beta-lactamase superfamily HMPREF1038_RS03450 PF00106 short chain dehydrogenase HMPREF1038_RS03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF1038_RS03455 PF03466 LysR substrate binding domain HMPREF1038_RS03465 PF00581 Rhodanese-like domain HMPREF1038_RS03475 PF00849 RNA pseudouridylate synthase HMPREF1038_RS03475 PF01479 S4 domain HMPREF1038_RS03480 PF03144 Elongation factor Tu domain 2 HMPREF1038_RS03480 PF14492 Elongation Factor G, domain II HMPREF1038_RS03480 PF00679 Elongation factor G C-terminus HMPREF1038_RS03480 PF00009 Elongation factor Tu GTP binding domain HMPREF1038_RS03500 PF00005 ABC transporter HMPREF1038_RS03505 PF02875 Mur ligase family, glutamate ligase domain HMPREF1038_RS03505 PF08245 Mur ligase middle domain HMPREF1038_RS03510 PF04101 Glycosyltransferase family 28 C-terminal domain HMPREF1038_RS03510 PF03033 Glycosyltransferase family 28 N-terminal domain HMPREF1038_RS03515 PF08478 POTRA domain, FtsQ-type HMPREF1038_RS03520 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HMPREF1038_RS03525 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS03550 PF00005 ABC transporter HMPREF1038_RS03555 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS03565 PF00005 ABC transporter HMPREF1038_RS03575 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS03580 PF01070 FMN-dependent dehydrogenase HMPREF1038_RS03585 PF01336 OB-fold nucleic acid binding domain HMPREF1038_RS03585 PF00152 tRNA synthetases class II (D, K and N) HMPREF1038_RS03590 PF01070 FMN-dependent dehydrogenase HMPREF1038_RS03600 PF02110 Hydroxyethylthiazole kinase family HMPREF1038_RS03605 PF02581 Thiamine monophosphate synthase HMPREF1038_RS03615 PF00005 ABC transporter HMPREF1038_RS03625 PF03070 TENA/THI-4/PQQC family HMPREF1038_RS03635 PF02110 Hydroxyethylthiazole kinase family HMPREF1038_RS03640 PF02581 Thiamine monophosphate synthase HMPREF1038_RS03645 PF08543 Phosphomethylpyrimidine kinase HMPREF1038_RS03650 PF03965 Penicillinase repressor HMPREF1038_RS03660 PF00403 Heavy-metal-associated domain HMPREF1038_RS03665 PF00205 Thiamine pyrophosphate enzyme, central domain HMPREF1038_RS03665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HMPREF1038_RS03665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMPREF1038_RS03675 PF13358 DDE superfamily endonuclease HMPREF1038_RS03685 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS03690 PF01238 Phosphomannose isomerase type I HMPREF1038_RS03695 PF00209 Sodium:neurotransmitter symporter family HMPREF1038_RS03700 PF13411 MerR HTH family regulatory protein HMPREF1038_RS03700 PF07739 TipAS antibiotic-recognition domain HMPREF1038_RS03705 PF13344 Haloacid dehalogenase-like hydrolase HMPREF1038_RS03705 PF00293 NUDIX domain HMPREF1038_RS03715 PF02645 Uncharacterised protein, DegV family COG1307 HMPREF1038_RS03725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HMPREF1038_RS03735 PF00574 Clp protease HMPREF1038_RS03740 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HMPREF1038_RS03745 PF13458 Periplasmic binding protein HMPREF1038_RS03750 PF02653 Branched-chain amino acid transport system / permease component HMPREF1038_RS03755 PF11862 Domain of unknown function (DUF3382) HMPREF1038_RS03755 PF02653 Branched-chain amino acid transport system / permease component HMPREF1038_RS03760 PF00005 ABC transporter HMPREF1038_RS03760 PF12399 Branched-chain amino acid ATP-binding cassette transporter HMPREF1038_RS03765 PF00005 ABC transporter HMPREF1038_RS03770 PF00571 CBS domain HMPREF1038_RS03770 PF01743 Poly A polymerase head domain HMPREF1038_RS03775 PF03462 PCRF domain HMPREF1038_RS03775 PF00472 RF-1 domain HMPREF1038_RS03780 PF00005 ABC transporter HMPREF1038_RS03785 PF02687 FtsX-like permease family HMPREF1038_RS03785 PF18075 FtsX extracellular domain HMPREF1038_RS03790 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS03790 PF00367 phosphotransferase system, EIIB HMPREF1038_RS03790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF1038_RS03795 PF03372 Endonuclease/Exonuclease/phosphatase family HMPREF1038_RS03800 PF00270 DEAD/DEAH box helicase HMPREF1038_RS03800 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS03805 PF02772 S-adenosylmethionine synthetase, central domain HMPREF1038_RS03805 PF02773 S-adenosylmethionine synthetase, C-terminal domain HMPREF1038_RS03805 PF00438 S-adenosylmethionine synthetase, N-terminal domain HMPREF1038_RS03810 PF01180 Dihydroorotate dehydrogenase HMPREF1038_RS03820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HMPREF1038_RS03820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HMPREF1038_RS03825 PF06265 Protein of unknown function (DUF1027) HMPREF1038_RS03830 PF04055 Radical SAM superfamily HMPREF1038_RS03840 PF00005 ABC transporter HMPREF1038_RS03840 PF12848 ABC transporter HMPREF1038_RS03845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HMPREF1038_RS03860 PF00886 Ribosomal protein S16 HMPREF1038_RS03875 PF05239 PRC-barrel domain HMPREF1038_RS03875 PF01782 RimM N-terminal domain HMPREF1038_RS03880 PF01746 tRNA (Guanine-1)-methyltransferase HMPREF1038_RS03885 PF13597 Anaerobic ribonucleoside-triphosphate reductase HMPREF1038_RS03885 PF03477 ATP cone domain HMPREF1038_RS03895 PF02229 Transcriptional Coactivator p15 (PC4) HMPREF1038_RS03905 PF02632 BioY family HMPREF1038_RS03910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF1038_RS03910 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF1038_RS03915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HMPREF1038_RS03920 PF00005 ABC transporter HMPREF1038_RS03925 PF12704 MacB-like periplasmic core domain HMPREF1038_RS03925 PF02687 FtsX-like permease family HMPREF1038_RS03930 PF01588 Putative tRNA binding domain HMPREF1038_RS03930 PF09334 tRNA synthetases class I (M) HMPREF1038_RS03945 PF00248 Aldo/keto reductase family HMPREF1038_RS03975 PF01433 Peptidase family M1 domain HMPREF1038_RS03975 PF11838 ERAP1-like C-terminal domain HMPREF1038_RS03980 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS03980 PF00072 Response regulator receiver domain HMPREF1038_RS03985 PF00512 His Kinase A (phospho-acceptor) domain HMPREF1038_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS04000 PF11490 DNA polymerase III polC-type N-terminus II HMPREF1038_RS04000 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF1038_RS04000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF1038_RS04000 PF14579 Helix-hairpin-helix motif HMPREF1038_RS04000 PF02811 PHP domain HMPREF1038_RS04000 PF00929 Exonuclease HMPREF1038_RS04005 PF01098 Cell cycle protein HMPREF1038_RS04010 PF01965 DJ-1/PfpI family HMPREF1038_RS04020 PF01751 Toprim domain HMPREF1038_RS04020 PF00986 DNA gyrase B subunit, carboxyl terminus HMPREF1038_RS04020 PF00204 DNA gyrase B HMPREF1038_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS04025 PF06160 Septation ring formation regulator, EzrA HMPREF1038_RS04030 PF01610 Transposase HMPREF1038_RS04030 PF13683 Integrase core domain HMPREF1038_RS04045 PF13358 DDE superfamily endonuclease HMPREF1038_RS04070 PF13333 Integrase core domain HMPREF1038_RS04070 PF00665 Integrase core domain HMPREF1038_RS04080 PF00293 NUDIX domain HMPREF1038_RS04100 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF1038_RS04100 PF07724 AAA domain (Cdc48 subfamily) HMPREF1038_RS04100 PF17871 AAA lid domain HMPREF1038_RS04100 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF1038_RS04105 PF08796 Protein of unknown function (DUF1797) HMPREF1038_RS04110 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS04115 PF00005 ABC transporter HMPREF1038_RS04120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HMPREF1038_RS04120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HMPREF1038_RS04125 PF01256 Carbohydrate kinase HMPREF1038_RS04130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HMPREF1038_RS04135 PF01676 Metalloenzyme superfamily HMPREF1038_RS04145 PF01048 Phosphorylase superfamily HMPREF1038_RS04160 PF17440 Thiol-activated cytolysin beta sandwich domain HMPREF1038_RS04160 PF01289 Thiol-activated cytolysin HMPREF1038_RS04165 PF01048 Phosphorylase superfamily HMPREF1038_RS04175 PF01649 Ribosomal protein S20 HMPREF1038_RS04180 PF00485 Phosphoribulokinase / Uridine kinase family HMPREF1038_RS04190 PF05175 Methyltransferase small domain HMPREF1038_RS04195 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HMPREF1038_RS04195 PF00591 Glycosyl transferase family, a/b domain HMPREF1038_RS04195 PF02885 Glycosyl transferase family, helical bundle domain HMPREF1038_RS04200 PF01791 DeoC/LacD family aldolase HMPREF1038_RS04205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HMPREF1038_RS04210 PF02608 ABC transporter substrate-binding protein PnrA-like HMPREF1038_RS04215 PF00005 ABC transporter HMPREF1038_RS04220 PF02653 Branched-chain amino acid transport system / permease component HMPREF1038_RS04225 PF02653 Branched-chain amino acid transport system / permease component HMPREF1038_RS04245 PF00665 Integrase core domain HMPREF1038_RS04245 PF13333 Integrase core domain HMPREF1038_RS04250 PF02660 Glycerol-3-phosphate acyltransferase HMPREF1038_RS04255 PF01751 Toprim domain HMPREF1038_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS04255 PF00986 DNA gyrase B subunit, carboxyl terminus HMPREF1038_RS04255 PF00204 DNA gyrase B HMPREF1038_RS04265 PF03989 DNA gyrase C-terminal domain, beta-propeller HMPREF1038_RS04265 PF00521 DNA gyrase/topoisomerase IV, subunit A HMPREF1038_RS04270 PF01063 Amino-transferase class IV HMPREF1038_RS04275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF1038_RS04290 PF01470 Pyroglutamyl peptidase HMPREF1038_RS04310 PF00575 S1 RNA binding domain HMPREF1038_RS04315 PF13185 GAF domain HMPREF1038_RS04320 PF12169 DNA polymerase III subunits gamma and tau domain III HMPREF1038_RS04330 PF00005 ABC transporter HMPREF1038_RS04335 PF01458 Uncharacterized protein family (UPF0051) HMPREF1038_RS04340 PF00266 Aminotransferase class-V HMPREF1038_RS04345 PF01592 NifU-like N terminal domain HMPREF1038_RS04350 PF01458 Uncharacterized protein family (UPF0051) HMPREF1038_RS04360 PF07943 Penicillin-binding protein 5, C-terminal domain HMPREF1038_RS04360 PF00768 D-alanyl-D-alanine carboxypeptidase HMPREF1038_RS04365 PF01594 AI-2E family transporter HMPREF1038_RS04375 PF08220 DeoR-like helix-turn-helix domain HMPREF1038_RS04375 PF00455 DeoR C terminal sensor domain HMPREF1038_RS04380 PF00294 pfkB family carbohydrate kinase HMPREF1038_RS04385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF1038_RS04385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS04390 PF01580 FtsK/SpoIIIE family HMPREF1038_RS04390 PF09397 Ftsk gamma domain HMPREF1038_RS04390 PF17854 FtsK alpha domain HMPREF1038_RS04400 PF00266 Aminotransferase class-V HMPREF1038_RS04405 PF02568 Thiamine biosynthesis protein (ThiI) HMPREF1038_RS04405 PF02926 THUMP domain HMPREF1038_RS04430 PF02384 N-6 DNA Methylase HMPREF1038_RS04450 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF1038_RS04450 PF00589 Phage integrase family HMPREF1038_RS04465 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HMPREF1038_RS04465 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS04465 PF08463 EcoEI R protein C-terminal HMPREF1038_RS04465 PF04851 Type III restriction enzyme, res subunit HMPREF1038_RS04475 PF02863 Arginine repressor, C-terminal domain HMPREF1038_RS04475 PF01316 Arginine repressor, DNA binding domain HMPREF1038_RS04480 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal HMPREF1038_RS04480 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HMPREF1038_RS04480 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain HMPREF1038_RS04485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF1038_RS04485 PF01336 OB-fold nucleic acid binding domain HMPREF1038_RS04485 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF1038_RS04485 PF02811 PHP domain HMPREF1038_RS04485 PF14579 Helix-hairpin-helix motif HMPREF1038_RS04490 PF00365 Phosphofructokinase HMPREF1038_RS04495 PF00224 Pyruvate kinase, barrel domain HMPREF1038_RS04495 PF02887 Pyruvate kinase, alpha/beta domain HMPREF1038_RS04500 PF00589 Phage integrase family HMPREF1038_RS04500 PF14659 Phage integrase, N-terminal SAM-like domain HMPREF1038_RS04535 PF09323 Domain of unknown function (DUF1980) HMPREF1038_RS04540 PF03773 Predicted permease HMPREF1038_RS04550 PF00575 S1 RNA binding domain HMPREF1038_RS04550 PF09371 Tex-like protein N-terminal domain HMPREF1038_RS04550 PF17674 HHH domain HMPREF1038_RS04550 PF16921 Tex protein YqgF-like domain HMPREF1038_RS04555 PF10263 SprT-like family HMPREF1038_RS04555 PF17283 SprT-like zinc ribbon domain HMPREF1038_RS04575 PF00005 ABC transporter HMPREF1038_RS04580 PF02687 FtsX-like permease family HMPREF1038_RS04600 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HMPREF1038_RS04600 PF01276 Orn/Lys/Arg decarboxylase, major domain HMPREF1038_RS04615 PF17284 Spermidine synthase tetramerisation domain HMPREF1038_RS04620 PF03435 Saccharopine dehydrogenase NADP binding domain HMPREF1038_RS04620 PF16653 Saccharopine dehydrogenase C-terminal domain HMPREF1038_RS04625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HMPREF1038_RS04630 PF04371 Porphyromonas-type peptidyl-arginine deiminase HMPREF1038_RS04635 PF00795 Carbon-nitrogen hydrolase HMPREF1038_RS04660 PF03466 LysR substrate binding domain HMPREF1038_RS04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF1038_RS04665 PF01252 Signal peptidase (SPase) II HMPREF1038_RS04670 PF01479 S4 domain HMPREF1038_RS04670 PF00849 RNA pseudouridylate synthase HMPREF1038_RS04680 PF00696 Amino acid kinase family HMPREF1038_RS04680 PF01472 PUA domain HMPREF1038_RS04685 PF00171 Aldehyde dehydrogenase family HMPREF1038_RS04690 PF14748 Pyrroline-5-carboxylate reductase dimerisation HMPREF1038_RS04690 PF03807 NADP oxidoreductase coenzyme F420-dependent HMPREF1038_RS04695 PF02223 Thymidylate kinase HMPREF1038_RS04700 PF09115 DNA polymerase III, delta subunit, C terminal HMPREF1038_RS04705 PF06156 Initiation control protein YabA HMPREF1038_RS04710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF1038_RS04740 PF01134 Glucose inhibited division protein A HMPREF1038_RS04745 PF00696 Amino acid kinase family HMPREF1038_RS04750 PF01765 Ribosome recycling factor HMPREF1038_RS04755 PF13509 S1 domain HMPREF1038_RS04755 PF17783 CvfB-like winged helix domain HMPREF1038_RS04760 PF06855 YozE SAM-like fold HMPREF1038_RS04765 PF02562 PhoH-like protein HMPREF1038_RS04780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HMPREF1038_RS04780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HMPREF1038_RS04785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HMPREF1038_RS04785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HMPREF1038_RS04790 PF13302 Acetyltransferase (GNAT) domain HMPREF1038_RS04795 PF10531 SLBB domain HMPREF1038_RS04800 PF00753 Metallo-beta-lactamase superfamily HMPREF1038_RS04800 PF13567 Domain of unknown function (DUF4131) HMPREF1038_RS04800 PF03772 Competence protein HMPREF1038_RS04810 PF00005 ABC transporter HMPREF1038_RS04820 PF00707 Translation initiation factor IF-3, C-terminal domain HMPREF1038_RS04820 PF05198 Translation initiation factor IF-3, N-terminal domain HMPREF1038_RS04825 PF01632 Ribosomal protein L35 HMPREF1038_RS04830 PF00453 Ribosomal protein L20 HMPREF1038_RS04835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HMPREF1038_RS04840 PF00970 Oxidoreductase FAD-binding domain HMPREF1038_RS04840 PF00175 Oxidoreductase NAD-binding domain HMPREF1038_RS04840 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HMPREF1038_RS04845 PF01180 Dihydroorotate dehydrogenase HMPREF1038_RS04850 PF17890 Peptidoglycan hydrolase LytB WW-like domain HMPREF1038_RS04850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HMPREF1038_RS04850 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain HMPREF1038_RS04850 PF01473 Putative cell wall binding repeat HMPREF1038_RS04855 PF05670 NFACT protein RNA binding domain HMPREF1038_RS04860 PF02130 Uncharacterized protein family UPF0054 HMPREF1038_RS04865 PF01219 Prokaryotic diacylglycerol kinase HMPREF1038_RS04870 PF01926 50S ribosome-binding GTPase HMPREF1038_RS04870 PF07650 KH domain HMPREF1038_RS04875 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HMPREF1038_RS04875 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HMPREF1038_RS04875 PF06827 Zinc finger found in FPG and IleRS HMPREF1038_RS04880 PF01121 Dephospho-CoA kinase HMPREF1038_RS04885 PF07690 Major Facilitator Superfamily HMPREF1038_RS04885 PF00083 Sugar (and other) transporter HMPREF1038_RS04890 PF00471 Ribosomal protein L33 HMPREF1038_RS04900 PF08206 Ribonuclease B OB domain HMPREF1038_RS04900 PF00773 RNB domain HMPREF1038_RS04900 PF17876 Cold shock domain HMPREF1038_RS04900 PF00575 S1 RNA binding domain HMPREF1038_RS04905 PF01668 SmpB protein HMPREF1038_RS04910 PF09313 Domain of unknown function (DUF1971) HMPREF1038_RS04910 PF03848 Tellurite resistance protein TehB HMPREF1038_RS04920 PF08439 Oligopeptidase F HMPREF1038_RS04920 PF01432 Peptidase family M3 HMPREF1038_RS04925 PF01596 O-methyltransferase HMPREF1038_RS04930 PF13145 PPIC-type PPIASE domain HMPREF1038_RS04935 PF13333 Integrase core domain HMPREF1038_RS04935 PF00665 Integrase core domain HMPREF1038_RS04955 PF04073 Aminoacyl-tRNA editing domain HMPREF1038_RS04970 PF14602 Hexapeptide repeat of succinyl-transferase HMPREF1038_RS04970 PF00483 Nucleotidyl transferase HMPREF1038_RS04970 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF1038_RS04975 PF00293 NUDIX domain HMPREF1038_RS04985 PF01048 Phosphorylase superfamily HMPREF1038_RS04990 PF04394 Protein of unknown function, DUF536 HMPREF1038_RS04990 PF08279 HTH domain HMPREF1038_RS04995 PF11490 DNA polymerase III polC-type N-terminus II HMPREF1038_RS04995 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF1038_RS04995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF1038_RS04995 PF14579 Helix-hairpin-helix motif HMPREF1038_RS04995 PF02811 PHP domain HMPREF1038_RS04995 PF00929 Exonuclease HMPREF1038_RS05000 PF03009 Glycerophosphoryl diester phosphodiesterase family HMPREF1038_RS05025 PF02683 Cytochrome C biogenesis protein transmembrane region HMPREF1038_RS05030 PF08534 Redoxin HMPREF1038_RS05035 PF13520 Amino acid permease HMPREF1038_RS05040 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HMPREF1038_RS05040 PF01297 Zinc-uptake complex component A periplasmic HMPREF1038_RS05055 PF13419 Haloacid dehalogenase-like hydrolase HMPREF1038_RS05065 PF03167 Uracil DNA glycosylase superfamily HMPREF1038_RS05070 PF00293 NUDIX domain HMPREF1038_RS05075 PF01979 Amidohydrolase family HMPREF1038_RS05085 PF01554 MatE HMPREF1038_RS05090 PF00676 Dehydrogenase E1 component HMPREF1038_RS05095 PF02780 Transketolase, C-terminal domain HMPREF1038_RS05095 PF02779 Transketolase, pyrimidine binding domain HMPREF1038_RS05100 PF00364 Biotin-requiring enzyme HMPREF1038_RS05100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HMPREF1038_RS05100 PF02817 e3 binding domain HMPREF1038_RS05105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF1038_RS05105 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF1038_RS05110 PF10437 Bacterial lipoate protein ligase C-terminus HMPREF1038_RS05110 PF03099 Biotin/lipoate A/B protein ligase family HMPREF1038_RS05115 PF00589 Phage integrase family HMPREF1038_RS05120 PF00654 Voltage gated chloride channel HMPREF1038_RS05125 PF01351 Ribonuclease HII HMPREF1038_RS05130 PF01926 50S ribosome-binding GTPase HMPREF1038_RS05135 PF07501 G5 domain HMPREF1038_RS05135 PF00746 LPXTG cell wall anchor motif HMPREF1038_RS05135 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region HMPREF1038_RS05135 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region HMPREF1038_RS05140 PF04650 YSIRK type signal peptide HMPREF1038_RS05140 PF00746 LPXTG cell wall anchor motif HMPREF1038_RS05140 PF07501 G5 domain HMPREF1038_RS05140 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region HMPREF1038_RS05140 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region HMPREF1038_RS05140 PF07581 The GLUG motif HMPREF1038_RS05150 PF13361 UvrD-like helicase C-terminal domain HMPREF1038_RS05150 PF12705 PD-(D/E)XK nuclease superfamily HMPREF1038_RS05150 PF00580 UvrD/REP helicase N-terminal domain HMPREF1038_RS05155 PF12705 PD-(D/E)XK nuclease superfamily HMPREF1038_RS05165 PF00589 Phage integrase family HMPREF1038_RS05165 PF14659 Phage integrase, N-terminal SAM-like domain HMPREF1038_RS05170 PF03952 Enolase, N-terminal domain HMPREF1038_RS05170 PF00113 Enolase, C-terminal TIM barrel domain HMPREF1038_RS05180 PF02595 Glycerate kinase family HMPREF1038_RS05195 PF00534 Glycosyl transferases group 1 HMPREF1038_RS05195 PF08323 Starch synthase catalytic domain HMPREF1038_RS05200 PF00483 Nucleotidyl transferase HMPREF1038_RS05205 PF00483 Nucleotidyl transferase HMPREF1038_RS05210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF1038_RS05210 PF02806 Alpha amylase, C-terminal all-beta domain HMPREF1038_RS05210 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS05215 PF00171 Aldehyde dehydrogenase family HMPREF1038_RS05230 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS05230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF1038_RS05230 PF17999 Pullulanase N1-terminal domain HMPREF1038_RS05235 PF12826 Helix-hairpin-helix motif HMPREF1038_RS05235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HMPREF1038_RS05235 PF03120 NAD-dependent DNA ligase OB-fold domain HMPREF1038_RS05235 PF01653 NAD-dependent DNA ligase adenylation domain HMPREF1038_RS05235 PF00533 BRCA1 C Terminus (BRCT) domain HMPREF1038_RS05250 PF16326 ABC transporter C-terminal domain HMPREF1038_RS05250 PF00005 ABC transporter HMPREF1038_RS05250 PF12848 ABC transporter HMPREF1038_RS05255 PF00216 Bacterial DNA-binding protein HMPREF1038_RS05260 PF02645 Uncharacterised protein, DegV family COG1307 HMPREF1038_RS05265 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HMPREF1038_RS05265 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HMPREF1038_RS05270 PF01687 Riboflavin kinase HMPREF1038_RS05270 PF06574 FAD synthetase HMPREF1038_RS05285 PF01016 Ribosomal L27 protein HMPREF1038_RS05295 PF00829 Ribosomal prokaryotic L21 protein HMPREF1038_RS05305 PF02575 YbaB/EbfC DNA-binding family HMPREF1038_RS05320 PF13683 Integrase core domain HMPREF1038_RS05320 PF01610 Transposase HMPREF1038_RS05325 PF01515 Phosphate acetyl/butaryl transferase HMPREF1038_RS05330 PF00849 RNA pseudouridylate synthase HMPREF1038_RS05335 PF01513 ATP-NAD kinase HMPREF1038_RS05340 PF04607 Region found in RelA / SpoT proteins HMPREF1038_RS05350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HMPREF1038_RS05350 PF14572 Phosphoribosyl synthetase-associated domain HMPREF1038_RS05355 PF00266 Aminotransferase class-V HMPREF1038_RS05370 PF06971 Putative DNA-binding protein N-terminus HMPREF1038_RS05370 PF02629 CoA binding domain HMPREF1038_RS05375 PF07722 Peptidase C26 HMPREF1038_RS05380 PF04002 RadC-like JAB domain HMPREF1038_RS05385 PF00580 UvrD/REP helicase N-terminal domain HMPREF1038_RS05385 PF13361 UvrD-like helicase C-terminal domain HMPREF1038_RS05405 PF00557 Metallopeptidase family M24 HMPREF1038_RS05410 PF00571 CBS domain HMPREF1038_RS05410 PF07085 DRTGG domain HMPREF1038_RS05410 PF03061 Thioesterase superfamily HMPREF1038_RS05410 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS05420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF1038_RS05430 PF01018 GTP1/OBG HMPREF1038_RS05430 PF09269 Domain of unknown function (DUF1967) HMPREF1038_RS05430 PF01926 50S ribosome-binding GTPase HMPREF1038_RS05445 PF13439 Glycosyltransferase Family 4 HMPREF1038_RS05445 PF00534 Glycosyl transferases group 1 HMPREF1038_RS05450 PF13439 Glycosyltransferase Family 4 HMPREF1038_RS05450 PF00534 Glycosyl transferases group 1 HMPREF1038_RS05455 PF01883 Iron-sulfur cluster assembly protein HMPREF1038_RS05460 PF00140 Sigma-70 factor, region 1.2 HMPREF1038_RS05460 PF03979 Sigma-70 factor, region 1.1 HMPREF1038_RS05460 PF04542 Sigma-70 region 2 HMPREF1038_RS05460 PF04545 Sigma-70, region 4 HMPREF1038_RS05460 PF04539 Sigma-70 region 3 HMPREF1038_RS05465 PF10410 DnaB-helicase binding domain of primase HMPREF1038_RS05465 PF08275 DNA primase catalytic core, N-terminal domain HMPREF1038_RS05465 PF01807 CHC2 zinc finger HMPREF1038_RS05470 PF00005 ABC transporter HMPREF1038_RS05470 PF09383 NIL domain HMPREF1038_RS05485 PF00311 Phosphoenolpyruvate carboxylase HMPREF1038_RS05490 PF01098 Cell cycle protein HMPREF1038_RS05500 PF01381 Helix-turn-helix HMPREF1038_RS05520 PF16363 GDP-mannose 4,6 dehydratase HMPREF1038_RS05580 PF06414 Zeta toxin HMPREF1038_RS05585 PF01381 Helix-turn-helix HMPREF1038_RS05605 PF00781 Diacylglycerol kinase catalytic domain HMPREF1038_RS05635 PF00239 Resolvase, N terminal domain HMPREF1038_RS05635 PF02796 Helix-turn-helix domain of resolvase HMPREF1038_RS05665 PF17841 BID domain of Bartonella effector protein (Bep) HMPREF1038_RS05665 PF03389 MobA/MobL family HMPREF1038_RS05665 PF01443 Viral (Superfamily 1) RNA helicase HMPREF1038_RS05680 PF00005 ABC transporter HMPREF1038_RS05685 PF01032 FecCD transport family HMPREF1038_RS05690 PF01032 FecCD transport family HMPREF1038_RS05710 PF05958 tRNA (Uracil-5-)-methyltransferase HMPREF1038_RS05730 PF00464 Serine hydroxymethyltransferase HMPREF1038_RS05745 PF05175 Methyltransferase small domain HMPREF1038_RS05750 PF00472 RF-1 domain HMPREF1038_RS05750 PF03462 PCRF domain HMPREF1038_RS05755 PF00265 Thymidine kinase HMPREF1038_RS05760 PF01361 Tautomerase enzyme HMPREF1038_RS05765 PF12631 MnmE helical domain HMPREF1038_RS05765 PF01926 50S ribosome-binding GTPase HMPREF1038_RS05765 PF10396 GTP-binding protein TrmE N-terminus HMPREF1038_RS05770 PF00701 Dihydrodipicolinate synthetase family HMPREF1038_RS05775 PF01118 Semialdehyde dehydrogenase, NAD binding domain HMPREF1038_RS05775 PF02774 Semialdehyde dehydrogenase, dimerisation domain HMPREF1038_RS05785 PF06177 QueT transporter HMPREF1038_RS05795 PF01741 Large-conductance mechanosensitive channel, MscL HMPREF1038_RS05800 PF00762 Ferrochelatase HMPREF1038_RS05805 PF01546 Peptidase family M20/M25/M40 HMPREF1038_RS05805 PF07687 Peptidase dimerisation domain HMPREF1038_RS05840 PF00391 PEP-utilising enzyme, mobile domain HMPREF1038_RS05840 PF02896 PEP-utilising enzyme, TIM barrel domain HMPREF1038_RS05840 PF05524 PEP-utilising enzyme, N-terminal HMPREF1038_RS05845 PF00381 PTS HPr component phosphorylation site HMPREF1038_RS05850 PF00462 Glutaredoxin HMPREF1038_RS05855 PF00317 Ribonucleotide reductase, all-alpha domain HMPREF1038_RS05855 PF08343 Ribonucleotide reductase N-terminal HMPREF1038_RS05855 PF02867 Ribonucleotide reductase, barrel domain HMPREF1038_RS05860 PF00268 Ribonucleotide reductase, small chain HMPREF1038_RS05865 PF00455 DeoR C terminal sensor domain HMPREF1038_RS05865 PF08220 DeoR-like helix-turn-helix domain HMPREF1038_RS05870 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS05875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS05875 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS05880 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HMPREF1038_RS05885 PF00874 PRD domain HMPREF1038_RS05885 PF03123 CAT RNA binding domain HMPREF1038_RS05890 PF01791 DeoC/LacD family aldolase HMPREF1038_RS05895 PF00294 pfkB family carbohydrate kinase HMPREF1038_RS05900 PF02502 Ribose/Galactose Isomerase HMPREF1038_RS05905 PF02502 Ribose/Galactose Isomerase HMPREF1038_RS05910 PF01263 Aldose 1-epimerase HMPREF1038_RS05940 PF06421 GTP-binding protein LepA C-terminus HMPREF1038_RS05940 PF03144 Elongation factor Tu domain 2 HMPREF1038_RS05940 PF00009 Elongation factor Tu GTP binding domain HMPREF1038_RS05940 PF00679 Elongation factor G C-terminus HMPREF1038_RS05945 PF00149 Calcineurin-like phosphoesterase HMPREF1038_RS05950 PF13476 AAA domain HMPREF1038_RS05955 PF02863 Arginine repressor, C-terminal domain HMPREF1038_RS05955 PF01316 Arginine repressor, DNA binding domain HMPREF1038_RS05960 PF01728 FtsJ-like methyltransferase HMPREF1038_RS05960 PF01479 S4 domain HMPREF1038_RS05965 PF00348 Polyprenyl synthetase HMPREF1038_RS05970 PF02609 Exonuclease VII small subunit HMPREF1038_RS05975 PF02601 Exonuclease VII, large subunit HMPREF1038_RS05975 PF13742 OB-fold nucleic acid binding domain HMPREF1038_RS05980 PF00485 Phosphoribulokinase / Uridine kinase family HMPREF1038_RS05995 PF01509 TruB family pseudouridylate synthase (N terminal domain) HMPREF1038_RS05995 PF16198 tRNA pseudouridylate synthase B C-terminal domain HMPREF1038_RS06015 PF04203 Sortase domain HMPREF1038_RS06020 PF03989 DNA gyrase C-terminal domain, beta-propeller HMPREF1038_RS06020 PF00521 DNA gyrase/topoisomerase IV, subunit A HMPREF1038_RS06025 PF00056 lactate/malate dehydrogenase, NAD binding domain HMPREF1038_RS06025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HMPREF1038_RS06030 PF07885 Ion channel HMPREF1038_RS06045 PF00753 Metallo-beta-lactamase superfamily HMPREF1038_RS06050 PF00512 His Kinase A (phospho-acceptor) domain HMPREF1038_RS06050 PF13426 PAS domain HMPREF1038_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS06050 PF00672 HAMP domain HMPREF1038_RS06055 PF00072 Response regulator receiver domain HMPREF1038_RS06055 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS06060 PF14815 NUDIX domain HMPREF1038_RS06060 PF00730 HhH-GPD superfamily base excision DNA repair protein HMPREF1038_RS06065 PF01268 Formate--tetrahydrofolate ligase HMPREF1038_RS06075 PF02441 Flavoprotein HMPREF1038_RS06080 PF12822 ECF transporter, substrate-specific component HMPREF1038_RS06090 PF02829 3H domain HMPREF1038_RS06090 PF08279 HTH domain HMPREF1038_RS06095 PF09297 NADH pyrophosphatase zinc ribbon domain HMPREF1038_RS06095 PF00293 NUDIX domain HMPREF1038_RS06110 PF12344 Ultra-violet resistance protein B HMPREF1038_RS06110 PF02151 UvrB/uvrC motif HMPREF1038_RS06110 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS06110 PF04851 Type III restriction enzyme, res subunit HMPREF1038_RS06110 PF17757 UvrB interaction domain HMPREF1038_RS06120 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS06125 PF00005 ABC transporter HMPREF1038_RS06130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HMPREF1038_RS06130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HMPREF1038_RS06135 PF02881 SRP54-type protein, helical bundle domain HMPREF1038_RS06135 PF00448 SRP54-type protein, GTPase domain HMPREF1038_RS06150 PF02463 RecF/RecN/SMC N terminal domain HMPREF1038_RS06150 PF06470 SMC proteins Flexible Hinge Domain HMPREF1038_RS06155 PF14622 Ribonuclease-III-like HMPREF1038_RS06155 PF00035 Double-stranded RNA binding motif HMPREF1038_RS06165 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF1038_RS06175 PF12102 Domain of unknown function (DUF3578) HMPREF1038_RS06175 PF07728 AAA domain (dynein-related subfamily) HMPREF1038_RS06185 PF00694 Aconitase C-terminal domain HMPREF1038_RS06195 PF00180 Isocitrate/isopropylmalate dehydrogenase HMPREF1038_RS06210 PF03932 CutC family HMPREF1038_RS06215 PF04304 Protein of unknown function (DUF454) HMPREF1038_RS06220 PF01396 Topoisomerase DNA binding C4 zinc finger HMPREF1038_RS06220 PF01131 DNA topoisomerase HMPREF1038_RS06220 PF01751 Toprim domain HMPREF1038_RS06230 PF02481 DNA recombination-mediator protein A HMPREF1038_RS06230 PF18255 DNA processing protein A sterile alpha motif domain HMPREF1038_RS06235 PF12804 MobA-like NTP transferase domain HMPREF1038_RS06250 PF08240 Alcohol dehydrogenase GroES-like domain HMPREF1038_RS06255 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HMPREF1038_RS06265 PF04991 LicD family HMPREF1038_RS06270 PF04991 LicD family HMPREF1038_RS06275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HMPREF1038_RS06275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HMPREF1038_RS06275 PF02142 MGS-like domain HMPREF1038_RS06280 PF00117 Glutamine amidotransferase class-I HMPREF1038_RS06280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HMPREF1038_RS06285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HMPREF1038_RS06285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HMPREF1038_RS06290 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS06295 PF00730 HhH-GPD superfamily base excision DNA repair protein HMPREF1038_RS06295 PF00633 Helix-hairpin-helix motif HMPREF1038_RS06295 PF10576 Iron-sulfur binding domain of endonuclease III HMPREF1038_RS06305 PF00005 ABC transporter HMPREF1038_RS06305 PF12848 ABC transporter HMPREF1038_RS06305 PF16326 ABC transporter C-terminal domain HMPREF1038_RS06310 PF01435 Peptidase family M48 HMPREF1038_RS06315 PF04011 LemA family HMPREF1038_RS06320 PF02527 rRNA small subunit methyltransferase G HMPREF1038_RS06325 PF00860 Permease family HMPREF1038_RS06330 PF00448 SRP54-type protein, GTPase domain HMPREF1038_RS06330 PF02881 SRP54-type protein, helical bundle domain HMPREF1038_RS06330 PF02978 Signal peptide binding domain HMPREF1038_RS06335 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HMPREF1038_RS06345 PF01966 HD domain HMPREF1038_RS06365 PF01245 Ribosomal protein L19 HMPREF1038_RS06370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HMPREF1038_RS06375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HMPREF1038_RS06380 PF01817 Chorismate mutase type II HMPREF1038_RS06380 PF00800 Prephenate dehydratase HMPREF1038_RS06380 PF01842 ACT domain HMPREF1038_RS06385 PF00258 Flavodoxin HMPREF1038_RS06390 PF01368 DHH family HMPREF1038_RS06390 PF02272 DHHA1 domain HMPREF1038_RS06395 PF01197 Ribosomal protein L31 HMPREF1038_RS06415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HMPREF1038_RS06415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HMPREF1038_RS06425 PF00664 ABC transporter transmembrane region HMPREF1038_RS06425 PF03412 Peptidase C39 family HMPREF1038_RS06425 PF00005 ABC transporter HMPREF1038_RS06445 PF00480 ROK family HMPREF1038_RS06450 PF00701 Dihydrodipicolinate synthetase family HMPREF1038_RS06455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HMPREF1038_RS06460 PF04608 Phosphatidylglycerophosphatase A HMPREF1038_RS06470 PF00005 ABC transporter HMPREF1038_RS06470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF1038_RS06480 PF12911 N-terminal TM domain of oligopeptide transport permease C HMPREF1038_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS06490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF1038_RS06500 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HMPREF1038_RS06545 PF00145 C-5 cytosine-specific DNA methylase HMPREF1038_RS06555 PF00542 Ribosomal protein L7/L12 C-terminal domain HMPREF1038_RS06555 PF16320 Ribosomal protein L7/L12 dimerisation domain HMPREF1038_RS06560 PF00466 Ribosomal protein L10 HMPREF1038_RS06565 PF01979 Amidohydrolase family HMPREF1038_RS06570 PF00005 ABC transporter HMPREF1038_RS06570 PF00664 ABC transporter transmembrane region HMPREF1038_RS06575 PF00005 ABC transporter HMPREF1038_RS06575 PF00664 ABC transporter transmembrane region HMPREF1038_RS06580 PF01641 SelR domain HMPREF1038_RS06580 PF01625 Peptide methionine sulfoxide reductase HMPREF1038_RS06590 PF08544 GHMP kinases C terminal HMPREF1038_RS06590 PF00288 GHMP kinases N terminal domain HMPREF1038_RS06595 PF03447 Homoserine dehydrogenase, NAD binding domain HMPREF1038_RS06595 PF00742 Homoserine dehydrogenase HMPREF1038_RS06600 PF05389 Negative regulator of genetic competence (MecA) HMPREF1038_RS06615 PF00535 Glycosyl transferase family 2 HMPREF1038_RS06620 PF00534 Glycosyl transferases group 1 HMPREF1038_RS06620 PF13439 Glycosyltransferase Family 4 HMPREF1038_RS06625 PF04991 LicD family HMPREF1038_RS06630 PF03816 Cell envelope-related transcriptional attenuator domain HMPREF1038_RS06635 PF00800 Prephenate dehydratase HMPREF1038_RS06640 PF01202 Shikimate kinase HMPREF1038_RS06645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF1038_RS06650 PF06133 Control of competence regulator ComK, YlbF/YmcA HMPREF1038_RS06655 PF02153 Prephenate dehydrogenase HMPREF1038_RS06660 PF01264 Chorismate synthase HMPREF1038_RS06665 PF01761 3-dehydroquinate synthase HMPREF1038_RS06670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HMPREF1038_RS06670 PF08501 Shikimate dehydrogenase substrate binding domain HMPREF1038_RS06675 PF01487 Type I 3-dehydroquinase HMPREF1038_RS06680 PF10672 S-adenosylmethionine-dependent methyltransferase HMPREF1038_RS06680 PF17785 PUA-like domain HMPREF1038_RS06690 PF00005 ABC transporter HMPREF1038_RS06695 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS06695 PF09154 Domain of unknown function (DUF1939) HMPREF1038_RS06700 PF02272 DHHA1 domain HMPREF1038_RS06700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HMPREF1038_RS06700 PF01411 tRNA synthetases class II (A) HMPREF1038_RS06715 PF13416 Bacterial extracellular solute-binding protein HMPREF1038_RS06720 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS06730 PF00005 ABC transporter HMPREF1038_RS06730 PF08402 TOBE domain HMPREF1038_RS06735 PF01565 FAD binding domain HMPREF1038_RS06735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HMPREF1038_RS06745 PF03306 Alpha-acetolactate decarboxylase HMPREF1038_RS06750 PF00155 Aminotransferase class I and II HMPREF1038_RS06750 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS06755 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS06760 PF01895 PhoU domain HMPREF1038_RS06765 PF00005 ABC transporter HMPREF1038_RS06770 PF00005 ABC transporter HMPREF1038_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS06780 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS06785 PF12849 PBP superfamily domain HMPREF1038_RS06790 PF01189 16S rRNA methyltransferase RsmB/F HMPREF1038_RS06790 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HMPREF1038_RS06790 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HMPREF1038_RS06795 PF00459 Inositol monophosphatase family HMPREF1038_RS06800 PF05256 Uncharacterised protein family (UPF0223) HMPREF1038_RS06805 PF03960 ArsC family HMPREF1038_RS06815 PF13344 Haloacid dehalogenase-like hydrolase HMPREF1038_RS06825 PF06969 HemN C-terminal domain HMPREF1038_RS06825 PF04055 Radical SAM superfamily HMPREF1038_RS06840 PF01790 Prolipoprotein diacylglyceryl transferase HMPREF1038_RS06845 PF02603 HPr Serine kinase N terminus HMPREF1038_RS06845 PF07475 HPr Serine kinase C-terminal domain HMPREF1038_RS06850 PF01165 Ribosomal protein S21 HMPREF1038_RS06855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HMPREF1038_RS06860 PF02547 Queuosine biosynthesis protein HMPREF1038_RS06875 PF13302 Acetyltransferase (GNAT) domain HMPREF1038_RS06880 PF02540 NAD synthase HMPREF1038_RS06885 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HMPREF1038_RS06885 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HMPREF1038_RS06885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HMPREF1038_RS06895 PF01381 Helix-turn-helix HMPREF1038_RS06905 PF00005 ABC transporter HMPREF1038_RS06915 PF01136 Peptidase family U32 HMPREF1038_RS06915 PF16325 Peptidase family U32 C-terminal domain HMPREF1038_RS06930 PF18755 Restriction Enzyme Adenine Methylase Associated HMPREF1038_RS06930 PF01555 DNA methylase HMPREF1038_RS06940 PF00664 ABC transporter transmembrane region HMPREF1038_RS06940 PF00005 ABC transporter HMPREF1038_RS06945 PF00664 ABC transporter transmembrane region HMPREF1038_RS06945 PF00005 ABC transporter HMPREF1038_RS06960 PF00005 ABC transporter HMPREF1038_RS06970 PF13007 Transposase C of IS166 homeodomain HMPREF1038_RS06970 PF13005 zinc-finger binding domain of transposase IS66 HMPREF1038_RS06970 PF03050 Transposase IS66 family HMPREF1038_RS06970 PF13817 IS66 C-terminal element HMPREF1038_RS06995 PF00117 Glutamine amidotransferase class-I HMPREF1038_RS06995 PF00958 GMP synthase C terminal domain HMPREF1038_RS06995 PF02540 NAD synthase HMPREF1038_RS07000 PF07702 UTRA domain HMPREF1038_RS07000 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS07005 PF00892 EamA-like transporter family HMPREF1038_RS07010 PF00144 Beta-lactamase HMPREF1038_RS07035 PF09587 Bacterial capsule synthesis protein PGA_cap HMPREF1038_RS07050 PF01327 Polypeptide deformylase HMPREF1038_RS07055 PF00588 SpoU rRNA Methylase family HMPREF1038_RS07055 PF08032 RNA 2'-O ribose methyltransferase substrate binding HMPREF1038_RS07060 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF1038_RS07070 PF00005 ABC transporter HMPREF1038_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS07080 PF03960 ArsC family HMPREF1038_RS07085 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HMPREF1038_RS07085 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HMPREF1038_RS07100 PF03006 Haemolysin-III related HMPREF1038_RS07105 PF01174 SNO glutamine amidotransferase family HMPREF1038_RS07110 PF01680 SOR/SNZ family HMPREF1038_RS07115 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF1038_RS07115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF1038_RS07120 PF02424 ApbE family HMPREF1038_RS07125 PF00890 FAD binding domain HMPREF1038_RS07125 PF04205 FMN-binding domain HMPREF1038_RS07125 PF03358 NADPH-dependent FMN reductase HMPREF1038_RS07130 PF00890 FAD binding domain HMPREF1038_RS07130 PF04205 FMN-binding domain HMPREF1038_RS07130 PF03358 NADPH-dependent FMN reductase HMPREF1038_RS07135 PF05979 Bacterial protein of unknown function (DUF896) HMPREF1038_RS07140 PF02092 Glycyl-tRNA synthetase beta subunit HMPREF1038_RS07145 PF02091 Glycyl-tRNA synthetase alpha subunit HMPREF1038_RS07155 PF00248 Aldo/keto reductase family HMPREF1038_RS07160 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HMPREF1038_RS07160 PF01522 Polysaccharide deacetylase HMPREF1038_RS07170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HMPREF1038_RS07170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HMPREF1038_RS07175 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS07175 PF00270 DEAD/DEAH box helicase HMPREF1038_RS07185 PF13358 DDE superfamily endonuclease HMPREF1038_RS07195 PF00009 Elongation factor Tu GTP binding domain HMPREF1038_RS07195 PF03144 Elongation factor Tu domain 2 HMPREF1038_RS07195 PF03143 Elongation factor Tu C-terminal domain HMPREF1038_RS07200 PF00230 Major intrinsic protein HMPREF1038_RS07235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HMPREF1038_RS07235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HMPREF1038_RS07235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HMPREF1038_RS07235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HMPREF1038_RS07245 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF1038_RS07250 PF00005 ABC transporter HMPREF1038_RS07255 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS07265 PF01594 AI-2E family transporter HMPREF1038_RS07270 PF10282 Lactonase, 7-bladed beta-propeller HMPREF1038_RS07275 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HMPREF1038_RS07275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HMPREF1038_RS07280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF1038_RS07280 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF1038_RS07285 PF00231 ATP synthase HMPREF1038_RS07290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF1038_RS07290 PF00306 ATP synthase alpha/beta chain, C terminal domain HMPREF1038_RS07290 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF1038_RS07295 PF00213 ATP synthase delta (OSCP) subunit HMPREF1038_RS07300 PF00430 ATP synthase B/B' CF(0) HMPREF1038_RS07305 PF00119 ATP synthase A chain HMPREF1038_RS07310 PF00137 ATP synthase subunit C HMPREF1038_RS07320 PF00583 Acetyltransferase (GNAT) family HMPREF1038_RS07330 PF01272 Transcription elongation factor, GreA/GreB, C-term HMPREF1038_RS07330 PF03449 Transcription elongation factor, N-terminal HMPREF1038_RS07335 PF02618 YceG-like family HMPREF1038_RS07350 PF08245 Mur ligase middle domain HMPREF1038_RS07350 PF01225 Mur ligase family, catalytic domain HMPREF1038_RS07350 PF02875 Mur ligase family, glutamate ligase domain HMPREF1038_RS07360 PF12419 SNF2 Helicase protein HMPREF1038_RS07360 PF00176 SNF2 family N-terminal domain HMPREF1038_RS07360 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS07365 PF00155 Aminotransferase class I and II HMPREF1038_RS07370 PF01053 Cys/Met metabolism PLP-dependent enzyme HMPREF1038_RS07375 PF00005 ABC transporter HMPREF1038_RS07375 PF00664 ABC transporter transmembrane region HMPREF1038_RS07380 PF00005 ABC transporter HMPREF1038_RS07380 PF00664 ABC transporter transmembrane region HMPREF1038_RS07385 PF00664 ABC transporter transmembrane region HMPREF1038_RS07385 PF00005 ABC transporter HMPREF1038_RS07390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF1038_RS07395 PF01943 Polysaccharide biosynthesis protein HMPREF1038_RS07395 PF14667 Polysaccharide biosynthesis C-terminal domain HMPREF1038_RS07400 PF02875 Mur ligase family, glutamate ligase domain HMPREF1038_RS07400 PF08245 Mur ligase middle domain HMPREF1038_RS07405 PF05532 CsbD-like HMPREF1038_RS07425 PF01368 DHH family HMPREF1038_RS07425 PF02833 DHHA2 domain HMPREF1038_RS07430 PF01541 GIY-YIG catalytic domain HMPREF1038_RS07435 PF05175 Methyltransferase small domain HMPREF1038_RS07440 PF00575 S1 RNA binding domain HMPREF1038_RS07445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HMPREF1038_RS07450 PF01084 Ribosomal protein S18 HMPREF1038_RS07455 PF00436 Single-strand binding protein family HMPREF1038_RS07460 PF01250 Ribosomal protein S6 HMPREF1038_RS07465 PF00152 tRNA synthetases class II (D, K and N) HMPREF1038_RS07465 PF01336 OB-fold nucleic acid binding domain HMPREF1038_RS07475 PF00155 Aminotransferase class I and II HMPREF1038_RS07490 PF03358 NADPH-dependent FMN reductase HMPREF1038_RS07495 PF03883 Peroxide stress protein YaaA HMPREF1038_RS07510 PF01327 Polypeptide deformylase HMPREF1038_RS07515 PF02798 Glutathione S-transferase, N-terminal domain HMPREF1038_RS07520 PF00690 Cation transporter/ATPase, N-terminus HMPREF1038_RS07520 PF00689 Cation transporting ATPase, C-terminus HMPREF1038_RS07525 PF01545 Cation efflux family HMPREF1038_RS07525 PF16916 Dimerisation domain of Zinc Transporter HMPREF1038_RS07530 PF00005 ABC transporter HMPREF1038_RS07530 PF16326 ABC transporter C-terminal domain HMPREF1038_RS07530 PF12848 ABC transporter HMPREF1038_RS07535 PF01743 Poly A polymerase head domain HMPREF1038_RS07535 PF12627 Probable RNA and SrmB- binding site of polymerase A HMPREF1038_RS07535 PF13735 tRNA nucleotidyltransferase domain 2 putative HMPREF1038_RS07540 PF05173 Dihydrodipicolinate reductase, C-terminus HMPREF1038_RS07540 PF01113 Dihydrodipicolinate reductase, N-terminus HMPREF1038_RS07545 PF02645 Uncharacterised protein, DegV family COG1307 HMPREF1038_RS07555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HMPREF1038_RS07555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HMPREF1038_RS07555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HMPREF1038_RS07555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HMPREF1038_RS07565 PF02457 DisA bacterial checkpoint controller nucleotide-binding HMPREF1038_RS07575 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF1038_RS07580 PF02650 WhiA C-terminal HTH domain HMPREF1038_RS07580 PF10298 WhiA N-terminal LAGLIDADG-like domain HMPREF1038_RS07580 PF14527 WhiA LAGLIDADG-like domain HMPREF1038_RS07585 PF01933 Uncharacterised protein family UPF0052 HMPREF1038_RS07590 PF03668 P-loop ATPase protein family HMPREF1038_RS07595 PF01042 Endoribonuclease L-PSP HMPREF1038_RS07600 PF01926 50S ribosome-binding GTPase HMPREF1038_RS07605 PF07724 AAA domain (Cdc48 subfamily) HMPREF1038_RS07605 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF1038_RS07605 PF06689 ClpX C4-type zinc finger HMPREF1038_RS07615 PF00186 Dihydrofolate reductase HMPREF1038_RS07620 PF00210 Ferritin-like domain HMPREF1038_RS07625 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain HMPREF1038_RS07625 PF17890 Peptidoglycan hydrolase LytB WW-like domain HMPREF1038_RS07625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HMPREF1038_RS07625 PF01473 Putative cell wall binding repeat HMPREF1038_RS07630 PF00121 Triosephosphate isomerase HMPREF1038_RS07635 PF07261 Replication initiation and membrane attachment HMPREF1038_RS07640 PF04204 Homoserine O-succinyltransferase HMPREF1038_RS07645 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS07650 PF13649 Methyltransferase domain HMPREF1038_RS07660 PF03459 TOBE domain HMPREF1038_RS07660 PF17912 MalK OB fold domain HMPREF1038_RS07660 PF00005 ABC transporter HMPREF1038_RS07670 PF00857 Isochorismatase family HMPREF1038_RS07675 PF08222 CodY helix-turn-helix domain HMPREF1038_RS07675 PF06018 CodY GAF-like domain HMPREF1038_RS07680 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS07680 PF00270 DEAD/DEAH box helicase HMPREF1038_RS07685 PF07690 Major Facilitator Superfamily HMPREF1038_RS07690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF1038_RS07690 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF1038_RS07695 PF08353 Domain of unknown function (DUF1727) HMPREF1038_RS07695 PF08245 Mur ligase middle domain HMPREF1038_RS07700 PF07685 CobB/CobQ-like glutamine amidotransferase domain HMPREF1038_RS07705 PF01321 Creatinase/Prolidase N-terminal domain HMPREF1038_RS07705 PF00557 Metallopeptidase family M24 HMPREF1038_RS07710 PF13333 Integrase core domain HMPREF1038_RS07710 PF00665 Integrase core domain HMPREF1038_RS07730 PF07155 ECF-type riboflavin transporter, S component HMPREF1038_RS07735 PF08543 Phosphomethylpyrimidine kinase HMPREF1038_RS07740 PF01416 tRNA pseudouridine synthase HMPREF1038_RS07760 PF03831 PhnA domain HMPREF1038_RS07760 PF08274 PhnA Zinc-Ribbon HMPREF1038_RS07765 PF02224 Cytidylate kinase HMPREF1038_RS07780 PF00535 Glycosyl transferase family 2 HMPREF1038_RS07785 PF16363 GDP-mannose 4,6 dehydratase HMPREF1038_RS07790 PF01266 FAD dependent oxidoreductase HMPREF1038_RS07795 PF01784 NIF3 (NGG1p interacting factor 3) HMPREF1038_RS07800 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HMPREF1038_RS07810 PF00665 Integrase core domain HMPREF1038_RS07810 PF13333 Integrase core domain HMPREF1038_RS07830 PF02780 Transketolase, C-terminal domain HMPREF1038_RS07830 PF00456 Transketolase, thiamine diphosphate binding domain HMPREF1038_RS07830 PF02779 Transketolase, pyrimidine binding domain HMPREF1038_RS07835 PF00834 Ribulose-phosphate 3 epimerase family HMPREF1038_RS07840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS07840 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS07845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS07870 PF01553 Acyltransferase HMPREF1038_RS07880 PF00312 Ribosomal protein S15 HMPREF1038_RS07885 PF13460 NAD(P)H-binding HMPREF1038_RS07900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF1038_RS07900 PF02824 TGS domain HMPREF1038_RS07900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HMPREF1038_RS07900 PF03129 Anticodon binding domain HMPREF1038_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS07910 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS07910 PF00072 Response regulator receiver domain HMPREF1038_RS07925 PF02082 Transcriptional regulator HMPREF1038_RS07960 PF02580 D-Tyr-tRNA(Tyr) deacylase HMPREF1038_RS07965 PF02824 TGS domain HMPREF1038_RS07965 PF13291 ACT domain HMPREF1038_RS07965 PF04607 Region found in RelA / SpoT proteins HMPREF1038_RS07975 PF00753 Metallo-beta-lactamase superfamily HMPREF1038_RS07980 PF01431 Peptidase family M13 HMPREF1038_RS07980 PF05649 Peptidase family M13 HMPREF1038_RS07985 PF00005 ABC transporter HMPREF1038_RS07990 PF00950 ABC 3 transport family HMPREF1038_RS07995 PF01297 Zinc-uptake complex component A periplasmic HMPREF1038_RS08000 PF08534 Redoxin HMPREF1038_RS08010 PF12704 MacB-like periplasmic core domain HMPREF1038_RS08010 PF02687 FtsX-like permease family HMPREF1038_RS08010 PF00005 ABC transporter HMPREF1038_RS08020 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF1038_RS08040 PF06827 Zinc finger found in FPG and IleRS HMPREF1038_RS08040 PF08264 Anticodon-binding domain of tRNA HMPREF1038_RS08040 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF1038_RS08055 PF05103 DivIVA protein HMPREF1038_RS08070 PF04472 Cell division protein SepF HMPREF1038_RS08075 PF01168 Alanine racemase, N-terminal domain HMPREF1038_RS08080 PF12327 FtsZ family, C-terminal domain HMPREF1038_RS08080 PF00091 Tubulin/FtsZ family, GTPase domain HMPREF1038_RS08085 PF02491 SHS2 domain inserted in FTSA HMPREF1038_RS08085 PF11983 Membrane-attachment and polymerisation-promoting switch HMPREF1038_RS08095 PF01225 Mur ligase family, catalytic domain HMPREF1038_RS08095 PF08245 Mur ligase middle domain HMPREF1038_RS08095 PF02875 Mur ligase family, glutamate ligase domain HMPREF1038_RS08100 PF07478 D-ala D-ala ligase C-terminus HMPREF1038_RS08100 PF01820 D-ala D-ala ligase N-terminus HMPREF1038_RS08105 PF02132 RecR protein HMPREF1038_RS08105 PF13662 Toprim domain HMPREF1038_RS08110 PF03717 Penicillin-binding Protein dimerisation domain HMPREF1038_RS08110 PF00905 Penicillin binding protein transpeptidase domain HMPREF1038_RS08120 PF00480 ROK family HMPREF1038_RS08125 PF00701 Dihydrodipicolinate synthetase family HMPREF1038_RS08145 PF04074 YhcH/YjgK/YiaL HMPREF1038_RS08150 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08155 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF1038_RS08165 PF00367 phosphotransferase system, EIIB HMPREF1038_RS08165 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS08170 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HMPREF1038_RS08175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HMPREF1038_RS08175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HMPREF1038_RS08180 PF02012 BNR/Asp-box repeat HMPREF1038_RS08180 PF13088 BNR repeat-like domain HMPREF1038_RS08180 PF02973 Sialidase, N-terminal domain HMPREF1038_RS08185 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08190 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08195 PF01547 Bacterial extracellular solute-binding protein HMPREF1038_RS08205 PF02973 Sialidase, N-terminal domain HMPREF1038_RS08205 PF13088 BNR repeat-like domain HMPREF1038_RS08205 PF04650 YSIRK type signal peptide HMPREF1038_RS08215 PF05448 Acetyl xylan esterase (AXE1) HMPREF1038_RS08220 PF00270 DEAD/DEAH box helicase HMPREF1038_RS08220 PF17191 RecG wedge domain HMPREF1038_RS08220 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS08225 PF01168 Alanine racemase, N-terminal domain HMPREF1038_RS08225 PF00842 Alanine racemase, C-terminal domain HMPREF1038_RS08230 PF01648 4'-phosphopantetheinyl transferase superfamily HMPREF1038_RS08235 PF00793 DAHP synthetase I family HMPREF1038_RS08240 PF00793 DAHP synthetase I family HMPREF1038_RS08245 PF02810 SEC-C motif HMPREF1038_RS08245 PF07517 SecA DEAD-like domain HMPREF1038_RS08245 PF07516 SecA Wing and Scaffold domain HMPREF1038_RS08245 PF01043 SecA preprotein cross-linking domain HMPREF1038_RS08255 PF00005 ABC transporter HMPREF1038_RS08280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HMPREF1038_RS08280 PF01926 50S ribosome-binding GTPase HMPREF1038_RS08285 PF00881 Nitroreductase family HMPREF1038_RS08290 PF01695 IstB-like ATP binding protein HMPREF1038_RS08290 PF07319 Primosomal protein DnaI N-terminus HMPREF1038_RS08300 PF03477 ATP cone domain HMPREF1038_RS08305 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS08310 PF00005 ABC transporter HMPREF1038_RS08325 PF00005 ABC transporter HMPREF1038_RS08325 PF13732 Domain of unknown function (DUF4162) HMPREF1038_RS08345 PF00480 ROK family HMPREF1038_RS08350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF1038_RS08350 PF00367 phosphotransferase system, EIIB HMPREF1038_RS08350 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS08360 PF00251 Glycosyl hydrolases family 32 N-terminal domain HMPREF1038_RS08360 PF08244 Glycosyl hydrolases family 32 C terminal HMPREF1038_RS08365 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS08370 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HMPREF1038_RS08375 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMPREF1038_RS08375 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMPREF1038_RS08405 PF03793 PASTA domain HMPREF1038_RS08405 PF00069 Protein kinase domain HMPREF1038_RS08415 PF01029 NusB family HMPREF1038_RS08415 PF01189 16S rRNA methyltransferase RsmB/F HMPREF1038_RS08420 PF02911 Formyl transferase, C-terminal domain HMPREF1038_RS08420 PF00551 Formyl transferase HMPREF1038_RS08425 PF18074 Primosomal protein N C-terminal domain HMPREF1038_RS08425 PF17764 3′ DNA-binding domain (3′BD) HMPREF1038_RS08425 PF04851 Type III restriction enzyme, res subunit HMPREF1038_RS08425 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS08425 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HMPREF1038_RS08430 PF01192 RNA polymerase Rpb6 HMPREF1038_RS08435 PF00625 Guanylate kinase HMPREF1038_RS08440 PF12072 Domain of unknown function (DUF3552) HMPREF1038_RS08440 PF01966 HD domain HMPREF1038_RS08440 PF00013 KH domain HMPREF1038_RS08445 PF05636 HIGH Nucleotidyl Transferase HMPREF1038_RS08450 PF13649 Methyltransferase domain HMPREF1038_RS08465 PF01966 HD domain HMPREF1038_RS08470 PF01467 Cytidylyltransferase-like HMPREF1038_RS08475 PF01985 CRS1 / YhbY (CRM) domain HMPREF1038_RS08480 PF01926 50S ribosome-binding GTPase HMPREF1038_RS08495 PF00924 Mechanosensitive ion channel HMPREF1038_RS08520 PF00085 Thioredoxin HMPREF1038_RS08525 PF14489 QueF-like protein HMPREF1038_RS08525 PF06508 Queuosine biosynthesis protein QueC HMPREF1038_RS08535 PF00230 Major intrinsic protein HMPREF1038_RS08545 PF01061 ABC-2 type transporter HMPREF1038_RS08550 PF00005 ABC transporter HMPREF1038_RS08560 PF01432 Peptidase family M3 HMPREF1038_RS08560 PF08439 Oligopeptidase F HMPREF1038_RS08565 PF04452 RNA methyltransferase HMPREF1038_RS08575 PF00293 NUDIX domain HMPREF1038_RS08610 PF16193 AAA C-terminal domain HMPREF1038_RS08610 PF05496 Holliday junction DNA helicase RuvB P-loop domain HMPREF1038_RS08610 PF12002 MgsA AAA+ ATPase C terminal HMPREF1038_RS08620 PF00251 Glycosyl hydrolases family 32 N-terminal domain HMPREF1038_RS08620 PF08244 Glycosyl hydrolases family 32 C terminal HMPREF1038_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08630 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08640 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS08645 PF08280 M protein trans-acting positive regulator (MGA) HTH domain HMPREF1038_RS08645 PF05043 Mga helix-turn-helix domain HMPREF1038_RS08645 PF08270 M protein trans-acting positive regulator (MGA) PRD domain HMPREF1038_RS08665 PF03780 Asp23 family, cell envelope-related function HMPREF1038_RS08670 PF05532 CsbD-like HMPREF1038_RS08685 PF03781 Sulfatase-modifying factor enzyme 1 HMPREF1038_RS08690 PF00884 Sulfatase HMPREF1038_RS08690 PF16347 Domain of unknown function (DUF4976) HMPREF1038_RS08695 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS08700 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HMPREF1038_RS08705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS08710 PF00722 Glycosyl hydrolases family 16 HMPREF1038_RS08720 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS08725 PF00480 ROK family HMPREF1038_RS08735 PF01478 Type IV leader peptidase family HMPREF1038_RS08735 PF06750 Bacterial Peptidase A24 N-terminal domain HMPREF1038_RS08750 PF00290 Tryptophan synthase alpha chain HMPREF1038_RS08755 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF1038_RS08760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HMPREF1038_RS08765 PF00218 Indole-3-glycerol phosphate synthase HMPREF1038_RS08770 PF02885 Glycosyl transferase family, helical bundle domain HMPREF1038_RS08770 PF00591 Glycosyl transferase family, a/b domain HMPREF1038_RS08775 PF00117 Glutamine amidotransferase class-I HMPREF1038_RS08780 PF04715 Anthranilate synthase component I, N terminal region HMPREF1038_RS08780 PF00425 chorismate binding enzyme HMPREF1038_RS08795 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS08805 PF02308 MgtC family HMPREF1038_RS08810 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08815 PF08402 TOBE domain HMPREF1038_RS08815 PF00005 ABC transporter HMPREF1038_RS08835 PF13229 Right handed beta helix region HMPREF1038_RS08835 PF12708 Pectate lyase superfamily protein HMPREF1038_RS08835 PF04650 YSIRK type signal peptide HMPREF1038_RS08850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HMPREF1038_RS08855 PF02397 Bacterial sugar transferase HMPREF1038_RS08860 PF00005 ABC transporter HMPREF1038_RS08860 PF00664 ABC transporter transmembrane region HMPREF1038_RS08865 PF00005 ABC transporter HMPREF1038_RS08865 PF00664 ABC transporter transmembrane region HMPREF1038_RS08885 PF03372 Endonuclease/Exonuclease/phosphatase family HMPREF1038_RS08900 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS08905 PF00860 Permease family HMPREF1038_RS08910 PF04556 DpnII restriction endonuclease HMPREF1038_RS08915 PF01555 DNA methylase HMPREF1038_RS08920 PF02086 D12 class N6 adenine-specific DNA methyltransferase HMPREF1038_RS08930 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HMPREF1038_RS08930 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HMPREF1038_RS08935 PF08544 GHMP kinases C terminal HMPREF1038_RS08935 PF10509 Galactokinase galactose-binding signature HMPREF1038_RS08935 PF00288 GHMP kinases N terminal domain HMPREF1038_RS08940 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS08945 PF00107 Zinc-binding dehydrogenase HMPREF1038_RS08945 PF08240 Alcohol dehydrogenase GroES-like domain HMPREF1038_RS08950 PF13411 MerR HTH family regulatory protein HMPREF1038_RS08955 PF01545 Cation efflux family HMPREF1038_RS08965 PF04973 Nicotinamide mononucleotide transporter HMPREF1038_RS08970 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS08975 PF00005 ABC transporter HMPREF1038_RS08975 PF00571 CBS domain HMPREF1038_RS08995 PF05343 M42 glutamyl aminopeptidase HMPREF1038_RS09000 PF01370 NAD dependent epimerase/dehydratase family HMPREF1038_RS09010 PF01032 FecCD transport family HMPREF1038_RS09015 PF01032 FecCD transport family HMPREF1038_RS09020 PF00005 ABC transporter HMPREF1038_RS09025 PF01497 Periplasmic binding protein HMPREF1038_RS09030 PF01809 Putative membrane protein insertion efficiency factor HMPREF1038_RS09035 PF01479 S4 domain HMPREF1038_RS09035 PF00849 RNA pseudouridylate synthase HMPREF1038_RS09040 PF04079 Segregation and condensation complex subunit ScpB HMPREF1038_RS09045 PF02616 Segregation and condensation protein ScpA HMPREF1038_RS09050 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF1038_RS09050 PF00589 Phage integrase family HMPREF1038_RS09065 PF01725 Ham1 family HMPREF1038_RS09070 PF01177 Asp/Glu/Hydantoin racemase HMPREF1038_RS09075 PF03672 Uncharacterised protein family (UPF0154) HMPREF1038_RS09080 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS09080 PF16657 Maltogenic Amylase, C-terminal domain HMPREF1038_RS09085 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS09085 PF00367 phosphotransferase system, EIIB HMPREF1038_RS09090 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS09090 PF07702 UTRA domain HMPREF1038_RS09095 PF09383 NIL domain HMPREF1038_RS09095 PF00005 ABC transporter HMPREF1038_RS09110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF1038_RS09110 PF00005 ABC transporter HMPREF1038_RS09115 PF00005 ABC transporter HMPREF1038_RS09115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF1038_RS09120 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS09120 PF12911 N-terminal TM domain of oligopeptide transport permease C HMPREF1038_RS09125 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS09130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF1038_RS09140 PF00128 Alpha amylase, catalytic domain HMPREF1038_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS09155 PF01547 Bacterial extracellular solute-binding protein HMPREF1038_RS09160 PF16875 Glycosyl hydrolase family 36 N-terminal domain HMPREF1038_RS09160 PF16874 Glycosyl hydrolase family 36 C-terminal domain HMPREF1038_RS09165 PF12833 Helix-turn-helix domain HMPREF1038_RS09165 PF02311 AraC-like ligand binding domain HMPREF1038_RS09170 PF03099 Biotin/lipoate A/B protein ligase family HMPREF1038_RS09170 PF02237 Biotin protein ligase C terminal domain HMPREF1038_RS09290 PF01938 TRAM domain HMPREF1038_RS09290 PF05958 tRNA (Uracil-5-)-methyltransferase HMPREF1038_RS09295 PF02631 RecX family HMPREF1038_RS09300 PF04167 Protein of unknown function (DUF402) HMPREF1038_RS09310 PF00118 TCP-1/cpn60 chaperonin family HMPREF1038_RS09315 PF00166 Chaperonin 10 Kd subunit HMPREF1038_RS09320 PF00436 Single-strand binding protein family HMPREF1038_RS09325 PF00106 short chain dehydrogenase HMPREF1038_RS09330 PF14794 Domain of unknown function (DUF4479) HMPREF1038_RS09330 PF01588 Putative tRNA binding domain HMPREF1038_RS09335 PF00085 Thioredoxin HMPREF1038_RS09370 PF00005 ABC transporter HMPREF1038_RS09370 PF00664 ABC transporter transmembrane region HMPREF1038_RS09385 PF01709 Transcriptional regulator HMPREF1038_RS09390 PF01289 Thiol-activated cytolysin HMPREF1038_RS09390 PF17440 Thiol-activated cytolysin beta sandwich domain HMPREF1038_RS09455 PF01473 Putative cell wall binding repeat HMPREF1038_RS09455 PF01510 N-acetylmuramoyl-L-alanine amidase HMPREF1038_RS09465 PF00154 recA bacterial DNA recombination protein HMPREF1038_RS09470 PF18146 Damage-inducible protein CinA KH domain HMPREF1038_RS09470 PF00994 Probable molybdopterin binding domain HMPREF1038_RS09470 PF02464 Competence-damaged protein HMPREF1038_RS09475 PF03816 Cell envelope-related transcriptional attenuator domain HMPREF1038_RS09485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HMPREF1038_RS09505 PF12704 MacB-like periplasmic core domain HMPREF1038_RS09505 PF02687 FtsX-like permease family HMPREF1038_RS09505 PF00005 ABC transporter HMPREF1038_RS09515 PF00334 Nucleoside diphosphate kinase HMPREF1038_RS09520 PF04997 RNA polymerase Rpb1, domain 1 HMPREF1038_RS09520 PF04998 RNA polymerase Rpb1, domain 5 HMPREF1038_RS09520 PF05000 RNA polymerase Rpb1, domain 4 HMPREF1038_RS09520 PF04983 RNA polymerase Rpb1, domain 3 HMPREF1038_RS09520 PF00623 RNA polymerase Rpb1, domain 2 HMPREF1038_RS09525 PF04560 RNA polymerase Rpb2, domain 7 HMPREF1038_RS09525 PF10385 RNA polymerase beta subunit external 1 domain HMPREF1038_RS09525 PF04565 RNA polymerase Rpb2, domain 3 HMPREF1038_RS09525 PF04561 RNA polymerase Rpb2, domain 2 HMPREF1038_RS09525 PF04563 RNA polymerase beta subunit HMPREF1038_RS09525 PF00562 RNA polymerase Rpb2, domain 6 HMPREF1038_RS09535 PF01595 Cyclin M transmembrane N-terminal domain HMPREF1038_RS09535 PF03471 Transporter associated domain HMPREF1038_RS09535 PF00571 CBS domain HMPREF1038_RS09540 PF01223 DNA/RNA non-specific endonuclease HMPREF1038_RS09545 PF11772 DNA-directed RNA polymerase subunit beta HMPREF1038_RS09550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF1038_RS09560 PF13180 PDZ domain HMPREF1038_RS09560 PF05362 Lon protease (S16) C-terminal proteolytic domain HMPREF1038_RS09565 PF01467 Cytidylyltransferase-like HMPREF1038_RS09575 PF03590 Aspartate-ammonia ligase HMPREF1038_RS09580 PF01027 Inhibitor of apoptosis-promoting Bax1 HMPREF1038_RS09585 PF00588 SpoU rRNA Methylase family HMPREF1038_RS09585 PF08032 RNA 2'-O ribose methyltransferase substrate binding HMPREF1038_RS09590 PF00708 Acylphosphatase HMPREF1038_RS09595 PF02096 60Kd inner membrane protein HMPREF1038_RS09600 PF04055 Radical SAM superfamily HMPREF1038_RS09605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HMPREF1038_RS09605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HMPREF1038_RS09610 PF09182 Bacterial purine repressor, N-terminal HMPREF1038_RS09610 PF00156 Phosphoribosyl transferase domain HMPREF1038_RS09615 PF01966 HD domain HMPREF1038_RS09615 PF01336 OB-fold nucleic acid binding domain HMPREF1038_RS09620 PF02646 RmuC family HMPREF1038_RS09625 PF04263 Thiamin pyrophosphokinase, catalytic domain HMPREF1038_RS09625 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HMPREF1038_RS09630 PF00834 Ribulose-phosphate 3 epimerase family HMPREF1038_RS09635 PF03193 RsgA GTPase HMPREF1038_RS09635 PF16745 RsgA N-terminal domain HMPREF1038_RS09650 PF00398 Ribosomal RNA adenine dimethylase HMPREF1038_RS09660 PF02687 FtsX-like permease family HMPREF1038_RS09660 PF00005 ABC transporter HMPREF1038_RS09660 PF12704 MacB-like periplasmic core domain HMPREF1038_RS09680 PF13331 Domain of unknown function (DUF4093) HMPREF1038_RS09680 PF13662 Toprim domain HMPREF1038_RS09685 PF01026 TatD related DNase HMPREF1038_RS09695 PF00468 Ribosomal protein L34 HMPREF1038_RS09700 PF00155 Aminotransferase class I and II HMPREF1038_RS09710 PF00582 Universal stress protein family HMPREF1038_RS09720 PF17763 Glutaminase/Asparaginase C-terminal domain HMPREF1038_RS09720 PF00710 Asparaginase, N-terminal HMPREF1038_RS09730 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS09735 PF00196 Bacterial regulatory proteins, luxR family HMPREF1038_RS09735 PF00072 Response regulator receiver domain HMPREF1038_RS09740 PF07730 Histidine kinase HMPREF1038_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS09750 PF00005 ABC transporter HMPREF1038_RS09840 PF02357 Transcription termination factor nusG HMPREF1038_RS09840 PF00467 KOW motif HMPREF1038_RS09850 PF00471 Ribosomal protein L33 HMPREF1038_RS09855 PF00905 Penicillin binding protein transpeptidase domain HMPREF1038_RS09855 PF00912 Transglycosylase HMPREF1038_RS09860 PF00849 RNA pseudouridylate synthase HMPREF1038_RS09865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HMPREF1038_RS09865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HMPREF1038_RS09870 PF02687 FtsX-like permease family HMPREF1038_RS09870 PF12704 MacB-like periplasmic core domain HMPREF1038_RS09885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HMPREF1038_RS09885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HMPREF1038_RS09895 PF00005 ABC transporter HMPREF1038_RS09900 PF00392 Bacterial regulatory proteins, gntR family HMPREF1038_RS09900 PF07702 UTRA domain HMPREF1038_RS09905 PF00232 Glycosyl hydrolase family 1 HMPREF1038_RS09910 PF02378 Phosphotransferase system, EIIC HMPREF1038_RS09915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS09920 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HMPREF1038_RS09925 PF00465 Iron-containing alcohol dehydrogenase HMPREF1038_RS09925 PF00171 Aldehyde dehydrogenase family HMPREF1038_RS09935 PF01451 Low molecular weight phosphotyrosine protein phosphatase HMPREF1038_RS09945 PF00456 Transketolase, thiamine diphosphate binding domain HMPREF1038_RS09945 PF02779 Transketolase, pyrimidine binding domain HMPREF1038_RS09945 PF02780 Transketolase, C-terminal domain HMPREF1038_RS09960 PF00596 Class II Aldolase and Adducin N-terminal domain HMPREF1038_RS09965 PF01261 Xylose isomerase-like TIM barrel HMPREF1038_RS09970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HMPREF1038_RS09975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF1038_RS09980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF1038_RS09985 PF03611 PTS system sugar-specific permease component HMPREF1038_RS09995 PF01424 R3H domain HMPREF1038_RS09995 PF14804 Jag N-terminus HMPREF1038_RS10000 PF02096 60Kd inner membrane protein HMPREF1038_RS10005 PF00825 Ribonuclease P HMPREF1038_RS10010 PF00871 Acetokinase family HMPREF1038_RS10050 PF07963 Prokaryotic N-terminal methylation motif HMPREF1038_RS10055 PF00482 Type II secretion system (T2SS), protein F HMPREF1038_RS10060 PF00437 Type II/IV secretion system protein HMPREF1038_RS10070 PF13823 Alcohol dehydrogenase GroES-associated HMPREF1038_RS10070 PF08240 Alcohol dehydrogenase GroES-like domain HMPREF1038_RS10070 PF00107 Zinc-binding dehydrogenase HMPREF1038_RS10075 PF01979 Amidohydrolase family HMPREF1038_RS10080 PF01757 Acyltransferase family HMPREF1038_RS10085 PF01702 Queuine tRNA-ribosyltransferase HMPREF1038_RS10095 PF01470 Pyroglutamyl peptidase HMPREF1038_RS10100 PF06993 Protein of unknown function (DUF1304) HMPREF1038_RS10115 PF08645 Polynucleotide kinase 3 phosphatase HMPREF1038_RS10115 PF00475 Imidazoleglycerol-phosphate dehydratase HMPREF1038_RS10120 PF01554 MatE HMPREF1038_RS10125 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF1038_RS10125 PF14821 Threonine synthase N terminus HMPREF1038_RS10215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HMPREF1038_RS10220 PF00749 tRNA synthetases class I (E and Q), catalytic domain HMPREF1038_RS10225 PF00342 Phosphoglucose isomerase HMPREF1038_RS10235 PF07722 Peptidase C26 HMPREF1038_RS10240 PF00664 ABC transporter transmembrane region HMPREF1038_RS10240 PF00005 ABC transporter HMPREF1038_RS10250 PF00664 ABC transporter transmembrane region HMPREF1038_RS10250 PF00005 ABC transporter HMPREF1038_RS10255 PF05192 MutS domain III HMPREF1038_RS10255 PF05188 MutS domain II HMPREF1038_RS10255 PF01624 MutS domain I HMPREF1038_RS10255 PF00488 MutS domain V HMPREF1038_RS10255 PF05190 MutS family domain IV HMPREF1038_RS10260 PF02863 Arginine repressor, C-terminal domain HMPREF1038_RS10260 PF01316 Arginine repressor, DNA binding domain HMPREF1038_RS10265 PF00750 tRNA synthetases class I (R) HMPREF1038_RS10265 PF05746 DALR anticodon binding domain HMPREF1038_RS10265 PF03485 Arginyl tRNA synthetase N terminal domain HMPREF1038_RS10280 PF00072 Response regulator receiver domain HMPREF1038_RS10280 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS10285 PF00512 His Kinase A (phospho-acceptor) domain HMPREF1038_RS10285 PF16736 Single Cache-like HMPREF1038_RS10285 PF00989 PAS fold HMPREF1038_RS10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS10290 PF12849 PBP superfamily domain HMPREF1038_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS10300 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS10305 PF00005 ABC transporter HMPREF1038_RS10310 PF01895 PhoU domain HMPREF1038_RS10325 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HMPREF1038_RS10325 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HMPREF1038_RS10330 PF00483 Nucleotidyl transferase HMPREF1038_RS10350 PF01812 5-formyltetrahydrofolate cyclo-ligase family HMPREF1038_RS10355 PF07687 Peptidase dimerisation domain HMPREF1038_RS10355 PF01546 Peptidase family M20/M25/M40 HMPREF1038_RS10360 PF14602 Hexapeptide repeat of succinyl-transferase HMPREF1038_RS10360 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF1038_RS10360 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HMPREF1038_RS10365 PF00892 EamA-like transporter family HMPREF1038_RS10370 PF00905 Penicillin binding protein transpeptidase domain HMPREF1038_RS10370 PF00912 Transglycosylase HMPREF1038_RS10375 PF00579 tRNA synthetases class I (W and Y) HMPREF1038_RS10375 PF01479 S4 domain HMPREF1038_RS10380 PF00403 Heavy-metal-associated domain HMPREF1038_RS10390 PF13847 Methyltransferase domain HMPREF1038_RS10410 PF00343 Carbohydrate phosphorylase HMPREF1038_RS10415 PF02446 4-alpha-glucanotransferase HMPREF1038_RS10420 PF13416 Bacterial extracellular solute-binding protein HMPREF1038_RS10425 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS10440 PF00356 Bacterial regulatory proteins, lacI family HMPREF1038_RS10440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HMPREF1038_RS10450 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HMPREF1038_RS10450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HMPREF1038_RS10455 PF02938 GAD domain HMPREF1038_RS10455 PF00152 tRNA synthetases class II (D, K and N) HMPREF1038_RS10455 PF01336 OB-fold nucleic acid binding domain HMPREF1038_RS10485 PF01381 Helix-turn-helix HMPREF1038_RS10500 PF13393 Histidyl-tRNA synthetase HMPREF1038_RS10500 PF03129 Anticodon binding domain HMPREF1038_RS10515 PF01883 Iron-sulfur cluster assembly protein HMPREF1038_RS10525 PF00920 Dehydratase family HMPREF1038_RS10530 PF02779 Transketolase, pyrimidine binding domain HMPREF1038_RS10530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HMPREF1038_RS10530 PF02780 Transketolase, C-terminal domain HMPREF1038_RS10535 PF00456 Transketolase, thiamine diphosphate binding domain HMPREF1038_RS10540 PF03611 PTS system sugar-specific permease component HMPREF1038_RS10550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF1038_RS10565 PF01783 Ribosomal L32p protein family HMPREF1038_RS10570 PF00471 Ribosomal protein L33 HMPREF1038_RS10580 PF00480 ROK family HMPREF1038_RS10585 PF01074 Glycosyl hydrolases family 38 N-terminal domain HMPREF1038_RS10585 PF07748 Glycosyl hydrolases family 38 C-terminal domain HMPREF1038_RS10585 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 HMPREF1038_RS10585 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain HMPREF1038_RS10585 PF09261 Alpha mannosidase middle domain HMPREF1038_RS10595 PF07971 Glycosyl hydrolase family 92 HMPREF1038_RS10595 PF17678 Glycosyl hydrolase family 92 N-terminal domain HMPREF1038_RS10610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HMPREF1038_RS10610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HMPREF1038_RS10615 PF00696 Amino acid kinase family HMPREF1038_RS10620 PF03606 C4-dicarboxylate anaerobic carrier HMPREF1038_RS10625 PF01546 Peptidase family M20/M25/M40 HMPREF1038_RS10635 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region HMPREF1038_RS10635 PF07581 The GLUG motif HMPREF1038_RS10635 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region HMPREF1038_RS10635 PF07501 G5 domain HMPREF1038_RS10635 PF04650 YSIRK type signal peptide HMPREF1038_RS10635 PF00746 LPXTG cell wall anchor motif HMPREF1038_RS10640 PF07501 G5 domain HMPREF1038_RS10640 PF00728 Glycosyl hydrolase family 20, catalytic domain HMPREF1038_RS10640 PF04650 YSIRK type signal peptide HMPREF1038_RS10640 PF00746 LPXTG cell wall anchor motif HMPREF1038_RS10650 PF00465 Iron-containing alcohol dehydrogenase HMPREF1038_RS10655 PF07881 L-fucose isomerase, first N-terminal domain HMPREF1038_RS10655 PF02952 L-fucose isomerase, C-terminal domain HMPREF1038_RS10655 PF07882 L-fucose isomerase, second N-terminal domain HMPREF1038_RS10660 PF08307 Glycosyl hydrolase family 98 C-terminal domain HMPREF1038_RS10660 PF08305 NPCBM/NEW2 domain HMPREF1038_RS10660 PF08306 Glycosyl hydrolase family 98 HMPREF1038_RS10670 PF03613 PTS system mannose/fructose/sorbose family IID component HMPREF1038_RS10680 PF03830 PTS system sorbose subfamily IIB component HMPREF1038_RS10690 PF05025 RbsD / FucU transport protein family HMPREF1038_RS10695 PF00596 Class II Aldolase and Adducin N-terminal domain HMPREF1038_RS10700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HMPREF1038_RS10700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HMPREF1038_RS10705 PF00455 DeoR C terminal sensor domain HMPREF1038_RS10705 PF08220 DeoR-like helix-turn-helix domain HMPREF1038_RS10710 PF01297 Zinc-uptake complex component A periplasmic HMPREF1038_RS10710 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HMPREF1038_RS10715 PF00950 ABC 3 transport family HMPREF1038_RS10720 PF00005 ABC transporter HMPREF1038_RS10725 PF01047 MarR family HMPREF1038_RS10730 PF04914 DltD protein HMPREF1038_RS10735 PF00550 Phosphopantetheine attachment site HMPREF1038_RS10740 PF03062 MBOAT, membrane-bound O-acyltransferase family HMPREF1038_RS10745 PF13193 AMP-binding enzyme C-terminal domain HMPREF1038_RS10745 PF00501 AMP-binding enzyme HMPREF1038_RS10755 PF07690 Major Facilitator Superfamily HMPREF1038_RS10760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HMPREF1038_RS10780 PF00230 Major intrinsic protein HMPREF1038_RS10785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HMPREF1038_RS10785 PF01266 FAD dependent oxidoreductase HMPREF1038_RS10790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HMPREF1038_RS10790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HMPREF1038_RS10800 PF01430 Hsp33 protein HMPREF1038_RS10805 PF01207 Dihydrouridine synthase (Dus) HMPREF1038_RS10815 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family HMPREF1038_RS10820 PF00512 His Kinase A (phospho-acceptor) domain HMPREF1038_RS10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF1038_RS10820 PF00672 HAMP domain HMPREF1038_RS10825 PF00486 Transcriptional regulatory protein, C terminal HMPREF1038_RS10825 PF00072 Response regulator receiver domain HMPREF1038_RS10830 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF1038_RS10830 PF07724 AAA domain (Cdc48 subfamily) HMPREF1038_RS10830 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF1038_RS10830 PF17871 AAA lid domain HMPREF1038_RS10830 PF02861 Clp amino terminal domain, pathogenicity island component HMPREF1038_RS10835 PF17727 CtsR C-terminal dimerization domain HMPREF1038_RS10835 PF05848 CtsR N-terminal HTH domain HMPREF1038_RS10840 PF00005 ABC transporter HMPREF1038_RS10845 PF09084 NMT1/THI5 like HMPREF1038_RS10850 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF1038_RS10870 PF03796 DnaB-like helicase C terminal domain HMPREF1038_RS10870 PF00772 DnaB-like helicase N terminal domain HMPREF1038_RS10875 PF03948 Ribosomal protein L9, C-terminal domain HMPREF1038_RS10875 PF01281 Ribosomal protein L9, N-terminal domain HMPREF1038_RS10880 PF01368 DHH family HMPREF1038_RS10880 PF02272 DHHA1 domain HMPREF1038_RS10885 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HMPREF1038_RS10885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HMPREF1038_RS10895 PF00271 Helicase conserved C-terminal domain HMPREF1038_RS10895 PF04851 Type III restriction enzyme, res subunit HMPREF1038_RS10900 PF09186 Domain of unknown function (DUF1949) HMPREF1038_RS10900 PF01205 Uncharacterized protein family UPF0029 HMPREF1038_RS10905 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF1038_RS10915 PF13358 DDE superfamily endonuclease HMPREF1038_RS10925 PF00889 Elongation factor TS HMPREF1038_RS10930 PF00318 Ribosomal protein S2 HMPREF1038_RS10935 PF01476 LysM domain HMPREF1038_RS10935 PF05257 CHAP domain HMPREF1038_RS10945 PF04085 rod shape-determining protein MreC HMPREF1038_RS10950 PF02361 Cobalt transport protein HMPREF1038_RS10955 PF00005 ABC transporter HMPREF1038_RS10960 PF00005 ABC transporter HMPREF1038_RS10965 PF01066 CDP-alcohol phosphatidyltransferase HMPREF1038_RS10975 PF00675 Insulinase (Peptidase family M16) HMPREF1038_RS10975 PF05193 Peptidase M16 inactive domain HMPREF1038_RS10980 PF05193 Peptidase M16 inactive domain HMPREF1038_RS10980 PF00675 Insulinase (Peptidase family M16) HMPREF1038_RS10990 PF02463 RecF/RecN/SMC N terminal domain HMPREF1038_RS10995 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF1038_RS10995 PF00571 CBS domain HMPREF1038_RS11000 PF00579 tRNA synthetases class I (W and Y) HMPREF1038_RS11005 PF12848 ABC transporter HMPREF1038_RS11005 PF00005 ABC transporter HMPREF1038_RS11045 PF03047 COMC family HMPREF1038_RS11055 PF02590 Predicted SPOUT methyltransferase HMPREF1038_RS11060 PF13180 PDZ domain HMPREF1038_RS11065 PF02195 ParB-like nuclease domain HMPREF1038_RS11065 PF17762 HTH domain found in ParB protein