locus-tag	class	description
FNL90_RS00005	COG1475	DNA binding
FNL90_RS00015	COG0592	DNA-directed DNA polymerase activity
FNL90_RS00025	COG0012	GTP binding
FNL90_RS00035	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FNL90_RS00040	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FNL90_RS00065	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FNL90_RS00070	COG0531	amino acid
FNL90_RS00250	COG3942	CHAP domain
FNL90_RS00270	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FNL90_RS00280	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FNL90_RS00295	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FNL90_RS00315	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FNL90_RS00330	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FNL90_RS00345	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FNL90_RS00360	COG1454	alcohol dehydrogenase
FNL90_RS00360	COG1012	belongs to the aldehyde dehydrogenase family
FNL90_RS00365	COG1064	alcohol dehydrogenase
FNL90_RS00370	COG0534	Mate efflux family protein
FNL90_RS00480	COG0201	protein transport
FNL90_RS00615	COG1121	(ABC) transporter
FNL90_RS00620	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FNL90_RS00635	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FNL90_RS00655	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FNL90_RS00660	COG1459	type II secretion system
FNL90_RS00665	COG4537	Required for transformation and DNA binding
FNL90_RS00705	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FNL90_RS00710	COG1363	Peptidase, m42
FNL90_RS00720	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FNL90_RS00725	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FNL90_RS00735	COG1428	Deoxynucleoside kinase
FNL90_RS00740	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FNL90_RS00780	COG4509	Sortase family
FNL90_RS00805	COG2031	fatty acid transporter
FNL90_RS00820	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FNL90_RS00835	COG0251	oxidation-reduction process
FNL90_RS00850	COG1269	ATP hydrolysis coupled proton transport
FNL90_RS00855	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FNL90_RS00865	COG1527	subunit (C
FNL90_RS00870	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
FNL90_RS00905	COG1744	ABC transporter substrate-binding protein PnrA-like
FNL90_RS00945	COG0626	cystathionine gamma-synthase activity
FNL90_RS00975	COG3623	hexulose-6-phosphate isomerase
FNL90_RS00995	COG4175	Glycine betaine
FNL90_RS00995	COG3448	diguanylate cyclase activity
FNL90_RS01005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FNL90_RS01005	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FNL90_RS01025	COG3969	phosphoadenosine phosphosulfate
FNL90_RS01030	COG1475	DNA binding
FNL90_RS01050	COG0157	Belongs to the NadC ModD family
FNL90_RS01075	COG1268	BioY protein
FNL90_RS01080	COG5433	transposase activity
FNL90_RS01090	COG1234	tRNA 3'-trailer cleavage
FNL90_RS01125	COG0705	Rhomboid family
FNL90_RS01125	COG0457	Tetratricopeptide repeat
FNL90_RS01145	COG1132	(ABC) transporter
FNL90_RS01150	COG1132	(ABC) transporter
FNL90_RS01160	COG0756	dUTP diphosphatase activity
FNL90_RS01185	COG3290	protein histidine kinase activity
FNL90_RS01210	COG1847	R3H domain protein
FNL90_RS01230	COG1175	transmembrane transport
FNL90_RS01235	COG0395	ABC-type sugar transport system, permease component
FNL90_RS01245	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FNL90_RS01260	COG0084	hydrolase, TatD family'
FNL90_RS01285	COG1564	THIamine pyrophosphokinase
FNL90_RS01305	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FNL90_RS01345	COG0765	amino acid transport
FNL90_RS01365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FNL90_RS01375	COG0719	Fe-S assembly protein
FNL90_RS01380	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FNL90_RS01395	COG1686	Belongs to the peptidase S11 family
FNL90_RS01400	COG1686	Belongs to the peptidase S11 family
FNL90_RS01405	COG4166	transmembrane transport
FNL90_RS01410	COG0601	transmembrane transport
FNL90_RS01415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FNL90_RS01420	COG0444	Belongs to the ABC transporter superfamily
FNL90_RS01475	COG5433	transposase activity
FNL90_RS01480	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
FNL90_RS01485	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FNL90_RS01490	COG1534	Rna-binding protein
FNL90_RS01500	COG1713	HD superfamily hydrolase involved in NAD metabolism
FNL90_RS01505	COG0799	negative regulation of ribosome biogenesis
FNL90_RS01510	COG2226	methyltransferase
FNL90_RS01525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FNL90_RS01530	COG1464	Belongs to the NlpA lipoprotein family
FNL90_RS01545	COG1114	Component of the transport system for branched-chain amino acids
FNL90_RS01555	COG0569	domain protein
FNL90_RS01560	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FNL90_RS01570	COG1704	LemA family
FNL90_RS01585	COG0745	RESPONSE REGULATOR receiver
FNL90_RS01605	COG1484	DNA-dependent DNA replication
FNL90_RS01615	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FNL90_RS01635	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FNL90_RS01650	COG1254	Belongs to the acylphosphatase family
FNL90_RS01655	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FNL90_RS01710	COG1187	pseudouridine synthase activity
FNL90_RS01725	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FNL90_RS01730	COG0671	phosphoesterase, PA-phosphatase related
FNL90_RS01735	COG1242	4 iron, 4 sulfur cluster binding
FNL90_RS01740	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FNL90_RS01745	COG1253	flavin adenine dinucleotide binding
FNL90_RS01750	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FNL90_RS01765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FNL90_RS01770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FNL90_RS01775	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FNL90_RS01780	COG1120	ATPase activity
FNL90_RS01790	COG2244	polysaccharide biosynthetic process
FNL90_RS01815	COG0470	DNA polymerase III
FNL90_RS01840	COG1393	Belongs to the ArsC family
FNL90_RS01845	COG0708	Exodeoxyribonuclease III
FNL90_RS01850	COG1304	FMN binding
FNL90_RS01865	COG5433	transposase activity
FNL90_RS01955	COG1028	Short-chain dehydrogenase reductase Sdr
FNL90_RS01960	COG0673	inositol 2-dehydrogenase activity
FNL90_RS01975	COG0494	nUDIX hydrolase
FNL90_RS01985	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FNL90_RS02075	COG1702	phosphate starvation-inducible protein PhoH
FNL90_RS02080	COG1573	uracil-dna glycosylase
FNL90_RS02090	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FNL90_RS02110	COG2274	protein secretion by the type I secretion system
FNL90_RS02115	COG2274	protein secretion by the type I secretion system
FNL90_RS02120	COG2274	protein secretion by the type I secretion system
FNL90_RS02155	COG2801	Transposase and inactivated derivatives
FNL90_RS02160	COG2801	Transposase and inactivated derivatives
FNL90_RS02170	COG3279	Response regulator of the LytR AlgR family
FNL90_RS02190	COG2274	protein secretion by the type I secretion system
FNL90_RS02270	COG0433	COG0433 Predicted ATPase
FNL90_RS02275	COG2814	Major facilitator Superfamily
FNL90_RS02290	COG0557	exoribonuclease II activity
FNL90_RS02320	COG0463	Glycosyl transferase, family 2
FNL90_RS02330	COG0778	Nitroreductase
FNL90_RS02335	COG0006	proline dipeptidase activity
FNL90_RS02340	COG1609	Transcriptional regulator
FNL90_RS02350	COG0438	transferase activity, transferring glycosyl groups
FNL90_RS02360	COG4555	ABC transporter
FNL90_RS02380	COG0183	Belongs to the thiolase family
FNL90_RS02395	COG0745	RESPONSE REGULATOR receiver
FNL90_RS02400	COG5002	protein histidine kinase activity
FNL90_RS02405	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FNL90_RS02415	COG1196	nuclear chromosome segregation
FNL90_RS02430	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FNL90_RS02530	COG0561	phosphatase activity
FNL90_RS02535	COG0561	phosphatase activity
FNL90_RS02540	COG0552	protein localization to endoplasmic reticulum
FNL90_RS02545	COG0477	Major facilitator Superfamily
FNL90_RS02550	COG3711	transcriptional antiterminator
FNL90_RS02555	COG1263	PTS System
FNL90_RS02555	COG2190	(PTS) system
FNL90_RS02555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FNL90_RS02565	COG3689	TIGRFAM TIGR03943 family protein
FNL90_RS02570	COG0701	Predicted permease
FNL90_RS02580	COG2183	response to ionizing radiation
FNL90_RS02625	COG0826	peptidase U32
FNL90_RS02630	COG4443	Transcriptional Coactivator p15 (PC4)
FNL90_RS02680	COG0386	Belongs to the glutathione peroxidase family
FNL90_RS02685	COG1164	Oligoendopeptidase f
FNL90_RS02695	COG0772	Belongs to the SEDS family
FNL90_RS02725	COG1078	dGTPase activity
FNL90_RS02745	COG1609	Transcriptional regulator
FNL90_RS02755	COG3716	PTS system mannose fructose sorbose family IID component
FNL90_RS02760	COG3715	PTS system
FNL90_RS02765	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FNL90_RS02780	COG1028	Short-chain dehydrogenase reductase Sdr
FNL90_RS02795	COG0800	Aldolase
FNL90_RS02800	COG0546	phosphoglycolate phosphatase activity
FNL90_RS02805	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FNL90_RS02815	COG2884	Cell division ATP-binding protein ftsE
FNL90_RS02820	COG2177	Part of the ABC transporter FtsEX involved in
FNL90_RS02835	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FNL90_RS02835	COG1199	ATP-dependent helicase activity
FNL90_RS02840	COG0436	Aminotransferase
FNL90_RS02875	COG3620	sequence-specific DNA binding
FNL90_RS02940	COG3723	Recombinational DNA repair protein, rece pathway
FNL90_RS03135	COG3177	Filamentation induced by cAMP protein fic
FNL90_RS03150	COG2217	Heavy metal translocating P-type atpase
FNL90_RS03165	COG1827	regulation of RNA biosynthetic process
FNL90_RS03175	COG2116	formate transmembrane transporter activity
FNL90_RS03180	COG0768	penicillin binding
FNL90_RS03195	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FNL90_RS03210	COG0513	Belongs to the DEAD box helicase family
FNL90_RS03225	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FNL90_RS03230	COG0204	Acyl-transferase
FNL90_RS03235	COG1596	polysaccharide export
FNL90_RS03235	COG1555	photosystem II stabilization
FNL90_RS03240	COG2333	competence protein COMEC
FNL90_RS03240	COG0658	competence protein
FNL90_RS03285	COG1187	pseudouridine synthase activity
FNL90_RS03300	COG2223	nitrite transmembrane transporter activity
FNL90_RS03305	COG4122	O-methyltransferase activity
FNL90_RS03320	COG1476	TRANSCRIPTIONal
FNL90_RS03345	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FNL90_RS03350	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FNL90_RS03355	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FNL90_RS03375	COG0726	polysaccharide deacetylase
FNL90_RS03380	COG0513	Belongs to the DEAD box helicase family
FNL90_RS03400	COG1956	GAF domain-containing protein
FNL90_RS03405	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FNL90_RS03415	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FNL90_RS03415	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FNL90_RS03440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FNL90_RS03445	COG4109	DRTGG domain
FNL90_RS03495	COG2814	Major facilitator Superfamily
FNL90_RS03505	COG1187	pseudouridine synthase activity
FNL90_RS03535	COG5433	transposase activity
FNL90_RS03540	COG2723	6-phospho-beta-galactosidase activity
FNL90_RS03550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FNL90_RS03550	COG3711	transcriptional antiterminator
FNL90_RS03560	COG1447	Phosphotransferase system cellobiose-specific component IIA
FNL90_RS03570	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FNL90_RS03580	COG1126	abc transporter atp-binding protein
FNL90_RS03585	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FNL90_RS03605	COG1696	Membrane protein involved in D-alanine export
FNL90_RS03615	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FNL90_RS03620	COG0657	acetylesterase activity
FNL90_RS03625	COG2182	Extracellular solute-binding protein
FNL90_RS03630	COG0366	Alpha amylase catalytic
FNL90_RS03640	COG1175	transmembrane transport
FNL90_RS03645	COG3833	ABC-type maltose transport systems, permease component
FNL90_RS03660	COG3833	ABC-type maltose transport systems, permease component
FNL90_RS03665	COG1175	transmembrane transport
FNL90_RS03670	COG2182	Extracellular solute-binding protein
FNL90_RS03675	COG1609	Transcriptional regulator
FNL90_RS03680	COG1640	4-alpha-glucanotransferase
FNL90_RS03685	COG0058	SHG alpha-glucan phosphorylase activity
FNL90_RS03855	COG1598	PFAM Uncharacterised protein family UPF0150
FNL90_RS04010	COG1705	Flagellar rod assembly protein muramidase FlgJ
FNL90_RS04040	COG1131	(ABC) transporter
FNL90_RS04045	COG1725	Transcriptional regulator
FNL90_RS04060	COG0469	pyruvate kinase activity
FNL90_RS04075	COG2824	Alkylphosphonate utilization operon protein PhnA
FNL90_RS04080	COG0765	amino acid transport
FNL90_RS04085	COG1126	abc transporter atp-binding protein
FNL90_RS04090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FNL90_RS04100	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FNL90_RS04105	COG1115	amino acid carrier protein
FNL90_RS04155	COG1136	(ABC) transporter
FNL90_RS04155	COG4591	ABC-type transport system involved in lipoprotein release permease component
FNL90_RS04185	COG0196	riboflavin kinase activity
FNL90_RS04200	COG0483	inositol monophosphate 1-phosphatase activity
FNL90_RS04205	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FNL90_RS04205	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FNL90_RS04215	COG0573	inorganic phosphate transmembrane transporter activity
FNL90_RS04220	COG0581	inorganic phosphate transmembrane transporter activity
FNL90_RS04235	COG0704	Plays a role in the regulation of phosphate uptake
FNL90_RS04245	COG0745	RESPONSE REGULATOR receiver
FNL90_RS04250	COG5002	protein histidine kinase activity
FNL90_RS04265	COG2813	Specifically methylates the guanine in position
FNL90_RS04270	COG0295	cytidine deaminase activity
FNL90_RS04275	COG1744	ABC transporter substrate-binding protein PnrA-like
FNL90_RS04280	COG3845	ABC transporter
FNL90_RS04285	COG4603	Belongs to the binding-protein-dependent transport system permease family
FNL90_RS04290	COG1079	Belongs to the binding-protein-dependent transport system permease family
FNL90_RS04295	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FNL90_RS04300	COG4684	Psort location CytoplasmicMembrane, score
FNL90_RS04305	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FNL90_RS04315	COG0095	Lipoate-protein ligase
FNL90_RS04325	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FNL90_RS04355	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FNL90_RS04360	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FNL90_RS04360	COG1328	CTP reductase activity
FNL90_RS04365	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FNL90_RS04370	COG0351	phosphomethylpyrimidine kinase
FNL90_RS04370	COG0352	thiamine-phosphate diphosphorylase activity
FNL90_RS04380	COG0488	(ABC) transporter
FNL90_RS04400	COG2188	Transcriptional regulator
FNL90_RS04410	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FNL90_RS04430	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FNL90_RS04460	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FNL90_RS04465	COG0511	ligase activity, forming carbon-carbon bonds
FNL90_RS04475	COG2851	Citrate transporter
FNL90_RS04490	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FNL90_RS04495	COG0511	ligase activity, forming carbon-carbon bonds
FNL90_RS04540	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FNL90_RS04545	COG0758	DNA mediated transformation
FNL90_RS04565	COG1272	protein, Hemolysin III
FNL90_RS04570	COG1597	lipid kinase activity
FNL90_RS04580	COG0346	lactoylglutathione lyase activity
FNL90_RS04585	COG3764	Sortase (surface protein transpeptidase)
FNL90_RS04610	COG1132	(ABC) transporter
FNL90_RS04640	COG2890	protein-(glutamine-N5) methyltransferase activity
FNL90_RS04665	COG2233	PERMEase
FNL90_RS04680	COG1174	glycine betaine transport
FNL90_RS04695	COG4221	oxidoreductase activity
FNL90_RS04700	COG0280	phosphate acetyltransferase
FNL90_RS04705	COG0564	pseudouridine synthase activity
FNL90_RS04715	COG2357	RelA SpoT domain protein
FNL90_RS04730	COG1104	cysteine desulfurase activity
FNL90_RS04745	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FNL90_RS04755	COG0628	permease
FNL90_RS04765	COG0038	chloride channel
FNL90_RS04770	COG3700	Belongs to the class B bacterial acid phosphatase family
FNL90_RS04785	COG3493	citrate carrier protein
FNL90_RS04790	COG3290	protein histidine kinase activity
FNL90_RS04795	COG4565	transcriptional regulatory protein
FNL90_RS04805	COG1177	transmembrane transport
FNL90_RS04810	COG1176	ABC-type spermidine putrescine transport system, permease component I
FNL90_RS04845	COG0285	dihydrofolate synthase activity
FNL90_RS04870	COG1396	sequence-specific DNA binding
FNL90_RS04885	COG1131	(ABC) transporter
FNL90_RS04960	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FNL90_RS04975	COG1012	belongs to the aldehyde dehydrogenase family
FNL90_RS04985	COG4753	response regulator
FNL90_RS04985	COG2207	Transcriptional regulator
FNL90_RS04990	COG2972	Histidine kinase
FNL90_RS04995	COG3716	PTS system mannose fructose sorbose family IID component
FNL90_RS05000	COG3715	PTS system
FNL90_RS05050	COG0647	UMP catabolic process
FNL90_RS05060	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FNL90_RS05080	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FNL90_RS05085	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FNL90_RS05090	COG3442	glutamine amidotransferase
FNL90_RS05095	COG0095	Lipoate-protein ligase
FNL90_RS05100	COG5492	domain, Protein
FNL90_RS05115	COG0508	dehydrogenase complex catalyzes the overall conversion of
FNL90_RS05120	COG0508	dehydrogenase complex catalyzes the overall conversion of
FNL90_RS05120	COG0022	dehydrogenase e1 component
FNL90_RS05125	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FNL90_RS05130	COG0488	(ABC) transporter
FNL90_RS05150	COG1129	ABC transporter
FNL90_RS05165	COG5433	transposase activity
FNL90_RS05170	COG1293	RNA-binding protein homologous to eukaryotic snRNP
FNL90_RS05175	COG0457	Tetratricopeptide repeat
FNL90_RS05180	COG0628	permease
FNL90_RS05185	COG1051	belongs to the nudix hydrolase family
FNL90_RS05190	COG1088	dTDP-glucose 4,6-dehydratase activity
FNL90_RS05200	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FNL90_RS05205	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FNL90_RS05215	COG2384	SAM-dependent methyltransferase
FNL90_RS05220	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FNL90_RS05235	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FNL90_RS05235	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FNL90_RS05240	COG0300	oxidoreductase activity
FNL90_RS05250	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
FNL90_RS05255	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FNL90_RS05295	COG0539	negative regulation of cytoplasmic translation
FNL90_RS05315	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FNL90_RS05325	COG0187	DNA topoisomerase II activity
FNL90_RS05345	COG0765	amino acid transport
FNL90_RS05375	COG0583	DNA-binding transcription factor activity
FNL90_RS05435	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FNL90_RS05445	COG3425	synthase
FNL90_RS05480	COG0745	RESPONSE REGULATOR receiver
FNL90_RS05485	COG2357	RelA SpoT domain protein
FNL90_RS05490	COG0737	Belongs to the 5'-nucleotidase family
FNL90_RS05495	COG0242	peptide deformylase activity
FNL90_RS05500	COG0488	(ABC) transporter
FNL90_RS05545	COG1705	Flagellar rod assembly protein muramidase FlgJ
FNL90_RS05545	COG1388	LysM domain
FNL90_RS05550	COG1705	Flagellar rod assembly protein muramidase FlgJ
FNL90_RS05550	COG1388	LysM domain
FNL90_RS05555	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FNL90_RS05555	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FNL90_RS05555	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FNL90_RS05560	COG1105	Belongs to the carbohydrate kinase PfkB family
FNL90_RS05565	COG1349	DNA-binding transcription factor activity
FNL90_RS05615	COG1837	Belongs to the UPF0109 family
FNL90_RS05625	COG0584	glycerophosphoryl diester phosphodiesterase
FNL90_RS05630	COG0577	efflux transmembrane transporter activity
FNL90_RS05635	COG1136	(ABC) transporter
FNL90_RS05640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FNL90_RS05670	COG0564	pseudouridine synthase activity
FNL90_RS05680	COG0583	DNA-binding transcription factor activity
FNL90_RS05685	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FNL90_RS05710	COG1104	cysteine desulfurase activity
FNL90_RS05720	COG0285	dihydrofolate synthase activity
FNL90_RS05725	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FNL90_RS05745	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FNL90_RS05750	COG1368	sulfuric ester hydrolase activity
FNL90_RS05810	COG1216	Glycosyl transferase, family 2
FNL90_RS05855	COG2151	metal-sulfur cluster biosynthetic enzyme
FNL90_RS05860	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FNL90_RS05865	COG0358	DNA primase activity
FNL90_RS05870	COG1970	mechanosensitive ion channel activity
FNL90_RS05880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FNL90_RS05895	COG2321	neutral zinc metallopeptidase
FNL90_RS05900	COG1136	(ABC) transporter
FNL90_RS05905	COG0577	efflux transmembrane transporter activity
FNL90_RS05930	COG5433	transposase activity
FNL90_RS05995	COG1597	lipid kinase activity
FNL90_RS06005	COG4708	membrane
FNL90_RS06025	COG1131	(ABC) transporter
FNL90_RS06115	COG1705	Flagellar rod assembly protein muramidase FlgJ
FNL90_RS06260	COG1475	DNA binding
FNL90_RS06395	COG0582	viral genome integration into host DNA
FNL90_RS06415	COG0038	chloride channel
FNL90_RS06425	COG0716	FMN binding
FNL90_RS06430	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FNL90_RS06440	COG2222	sugar isomerase
FNL90_RS06445	COG2188	Transcriptional regulator
FNL90_RS06470	COG1705	Flagellar rod assembly protein muramidase FlgJ
FNL90_RS06615	COG1475	DNA binding
FNL90_RS06690	COG3723	Recombinational DNA repair protein, rece pathway
FNL90_RS06735	COG1396	sequence-specific DNA binding
FNL90_RS06745	COG0582	viral genome integration into host DNA
FNL90_RS06760	COG2755	lipolytic protein G-D-S-L family
FNL90_RS06775	COG0497	DNA recombination
FNL90_RS06780	COG1438	arginine binding
FNL90_RS06785	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FNL90_RS06810	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FNL90_RS06815	COG0415	Belongs to the DNA photolyase family
FNL90_RS06825	COG0765	amino acid transport
FNL90_RS06830	COG4703	Protein of unknown function (DUF1797)
FNL90_RS06835	COG0542	response to heat
FNL90_RS06840	COG0494	nUDIX hydrolase
FNL90_RS06855	COG3599	regulation of cell shape
FNL90_RS06860	COG2302	S4 RNA-binding domain
FNL90_RS06875	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FNL90_RS06900	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FNL90_RS06910	COG1217	gtp-binding protein TYPA
FNL90_RS06915	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FNL90_RS06920	COG1940	carbohydrate kinase activity
FNL90_RS06930	COG0783	Belongs to the Dps family
FNL90_RS06945	COG4470	Protein conserved in bacteria
FNL90_RS06950	COG1609	Transcriptional regulator
FNL90_RS06955	COG3480	Lon protease (S16) C-terminal proteolytic domain
FNL90_RS06965	COG0742	ribosomal rna small subunit methyltransferase
FNL90_RS06975	COG0549	Belongs to the carbamate kinase family
FNL90_RS06980	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FNL90_RS06985	COG1288	antiporter activity
FNL90_RS07000	COG2235	arginine
FNL90_RS07025	COG2972	Histidine kinase
FNL90_RS07040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FNL90_RS07045	COG0785	Cytochrome C biogenesis protein
FNL90_RS07055	COG0673	inositol 2-dehydrogenase activity
FNL90_RS07090	COG5433	transposase activity
FNL90_RS07105	COG1605	Chorismate mutase
FNL90_RS07105	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FNL90_RS07125	COG2226	methyltransferase
FNL90_RS07135	COG3250	beta-galactosidase activity
FNL90_RS07140	COG4753	response regulator
FNL90_RS07140	COG2207	Transcriptional regulator
FNL90_RS07145	COG2972	Histidine kinase
FNL90_RS07155	COG1653	transport
FNL90_RS07160	COG0395	ABC-type sugar transport system, permease component
FNL90_RS07165	COG1175	transmembrane transport
FNL90_RS07170	COG1940	carbohydrate kinase activity
FNL90_RS07175	COG2723	6-phospho-beta-galactosidase activity
FNL90_RS07180	COG3525	Glycosyl hydrolase, family 20, catalytic domain
FNL90_RS07195	COG0383	alpha-mannosidase activity
FNL90_RS07290	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FNL90_RS07295	COG1739	Uncharacterized protein family UPF0029
FNL90_RS07305	COG1098	S1 RNA binding domain
FNL90_RS07315	COG2197	response regulator
FNL90_RS07320	COG4585	Histidine kinase
FNL90_RS07330	COG0515	serine threonine protein kinase
FNL90_RS07330	COG2815	serine threonine protein kinase
FNL90_RS07340	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FNL90_RS07340	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FNL90_RS07350	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FNL90_RS07370	COG0583	DNA-binding transcription factor activity
FNL90_RS07375	COG0183	Belongs to the thiolase family
FNL90_RS07380	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FNL90_RS07390	COG1028	Short-chain dehydrogenase reductase Sdr
FNL90_RS07395	COG2610	gluconate transmembrane transporter activity
FNL90_RS07410	COG0116	Belongs to the methyltransferase superfamily
FNL90_RS07435	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FNL90_RS07440	COG3579	cysteine-type endopeptidase activity
FNL90_RS07450	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FNL90_RS07455	COG1113	amino acid transport
FNL90_RS07460	COG0492	ferredoxin-NADP+ reductase activity
FNL90_RS07470	COG1126	abc transporter atp-binding protein
FNL90_RS07480	COG0513	Belongs to the DEAD box helicase family
FNL90_RS07490	COG0768	penicillin binding
FNL90_RS07525	COG1131	(ABC) transporter
FNL90_RS07550	COG0446	pyridine nucleotide-disulphide oxidoreductase
FNL90_RS07555	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FNL90_RS07590	COG1755	Isoprenylcysteine carboxyl methyltransferase
FNL90_RS07595	COG0656	L-ascorbic acid biosynthetic process
FNL90_RS07605	COG1283	sodium-dependent phosphate transmembrane transporter activity
FNL90_RS07625	COG0561	phosphatase activity
FNL90_RS07630	COG2860	membrane
FNL90_RS07680	COG2217	Heavy metal translocating P-type atpase
FNL90_RS07710	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FNL90_RS07715	COG0195	Participates in both transcription termination and antitermination
FNL90_RS07740	COG4473	ABC transporter
FNL90_RS07745	COG1131	(ABC) transporter
FNL90_RS07750	COG0537	adenosine 5'-monophosphoramidase activity
FNL90_RS07760	COG1316	TRANSCRIPTIONal
FNL90_RS07770	COG0802	atpase or kinase
FNL90_RS07775	COG2252	PERMEase
FNL90_RS07780	COG0561	phosphatase activity
FNL90_RS07790	COG3715	PTS system
FNL90_RS07795	COG3716	PTS system mannose fructose sorbose family IID component
FNL90_RS07820	COG0439	Biotin carboxylase
FNL90_RS07835	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FNL90_RS07840	COG1028	Short-chain dehydrogenase reductase Sdr
FNL90_RS07845	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FNL90_RS07870	COG1024	Enoyl-CoA hydratase
FNL90_RS07875	COG0484	heat shock protein binding
FNL90_RS07905	COG0588	phosphoglycerate mutase activity
FNL90_RS07910	COG2261	transglycosylase associated protein
FNL90_RS07940	COG1335	isochorismatase
FNL90_RS07950	COG0436	Aminotransferase
FNL90_RS07960	COG0561	phosphatase activity
FNL90_RS07965	COG0252	asparaginase activity
FNL90_RS07980	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FNL90_RS07985	COG1129	ABC transporter
FNL90_RS08000	COG1132	(ABC) transporter
FNL90_RS08005	COG4988	ABC transporter
FNL90_RS08010	COG1120	ATPase activity
FNL90_RS08030	COG3942	CHAP domain
FNL90_RS08030	COG1388	LysM domain
FNL90_RS08050	COG5433	transposase activity
FNL90_RS08055	COG1482	cell wall glycoprotein biosynthetic process
FNL90_RS08060	COG1940	carbohydrate kinase activity
FNL90_RS08070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FNL90_RS08070	COG1263	PTS System
FNL90_RS08070	COG2190	(PTS) system
FNL90_RS08075	COG1621	beta-fructofuranosidase activity
FNL90_RS08080	COG1609	Transcriptional regulator
FNL90_RS08100	COG2131	deaminase
FNL90_RS08105	COG0006	proline dipeptidase activity
FNL90_RS08145	COG1194	a g-specific adenine glycosylase
FNL90_RS08155	COG3118	belongs to the thioredoxin family
FNL90_RS08185	COG0681	Belongs to the peptidase S26 family
FNL90_RS08190	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FNL90_RS08205	COG1882	Formate acetyltransferase
FNL90_RS08210	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FNL90_RS08220	COG5433	transposase activity
FNL90_RS08235	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FNL90_RS08245	COG2814	Major facilitator Superfamily
FNL90_RS08250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FNL90_RS08275	COG0789	Transcriptional regulator
FNL90_RS08290	COG2081	HI0933 family
FNL90_RS08300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FNL90_RS08305	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FNL90_RS08325	COG0456	acetyltransferase
FNL90_RS08330	COG1214	PFAM Peptidase M22, glycoprotease
FNL90_RS08345	COG0174	glutamine synthetase
FNL90_RS08350	COG0789	Transcriptional regulator
FNL90_RS08365	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FNL90_RS08420	COG0668	transmembrane transport
FNL90_RS08430	COG4720	Psort location CytoplasmicMembrane, score
FNL90_RS08435	COG0351	phosphomethylpyrimidine kinase
FNL90_RS08480	COG1929	Belongs to the glycerate kinase type-1 family
FNL90_RS08485	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FNL90_RS08510	COG0577	efflux transmembrane transporter activity
FNL90_RS08515	COG1136	(ABC) transporter
FNL90_RS08540	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FNL90_RS08540	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FNL90_RS08545	COG1447	Phosphotransferase system cellobiose-specific component IIA
FNL90_RS08590	COG4974	Belongs to the 'phage' integrase family
FNL90_RS08600	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FNL90_RS08605	COG1476	TRANSCRIPTIONal
FNL90_RS08625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FNL90_RS08635	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
FNL90_RS08650	COG1045	serine acetyltransferase
FNL90_RS08665	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FNL90_RS08705	COG1846	Transcriptional regulator
FNL90_RS08725	COG4589	Belongs to the CDS family
FNL90_RS08735	COG1862	Preprotein translocase
FNL90_RS08745	COG1523	belongs to the glycosyl hydrolase 13 family
FNL90_RS08755	COG3842	ATPase activity
FNL90_RS08795	COG1263	PTS System
FNL90_RS08795	COG2190	(PTS) system
FNL90_RS08795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FNL90_RS08800	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FNL90_RS08815	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FNL90_RS08820	COG0512	Glutamine amidotransferase of anthranilate synthase
FNL90_RS08825	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FNL90_RS08860	COG0601	transmembrane transport
FNL90_RS08870	COG1122	ATPase activity
FNL90_RS08890	COG0803	Belongs to the bacterial solute-binding protein 9 family
FNL90_RS08925	COG3711	transcriptional antiterminator
FNL90_RS08935	COG3942	CHAP domain
FNL90_RS08935	COG1705	Flagellar rod assembly protein muramidase FlgJ
FNL90_RS08940	COG2205	protein histidine kinase activity
FNL90_RS08945	COG0745	RESPONSE REGULATOR receiver
FNL90_RS08950	COG0577	efflux transmembrane transporter activity
FNL90_RS08955	COG1136	(ABC) transporter
FNL90_RS09020	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FNL90_RS09035	COG1882	Formate acetyltransferase
FNL90_RS09040	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FNL90_RS09045	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FNL90_RS09050	COG1447	Phosphotransferase system cellobiose-specific component IIA
FNL90_RS09055	COG2390	Transcriptional regulator
FNL90_RS09060	COG1349	DNA-binding transcription factor activity
FNL90_RS09065	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FNL90_RS09080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FNL90_RS09090	COG0564	pseudouridine synthase activity
FNL90_RS09120	COG0542	response to heat
FNL90_RS09125	COG4463	regulation of RNA biosynthetic process
FNL90_RS09135	COG5433	transposase activity
FNL90_RS09145	COG0450	alkyl hydroperoxide reductase
FNL90_RS09160	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FNL90_RS09170	COG3404	Formiminotransferase-cyclodeaminase
FNL90_RS09185	COG0531	amino acid
FNL90_RS09205	COG5433	transposase activity
FNL90_RS09225	COG3590	peptidase
FNL90_RS09230	COG0366	Alpha amylase catalytic
FNL90_RS09235	COG1263	PTS System
FNL90_RS09235	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FNL90_RS09245	COG1733	regulation of RNA biosynthetic process
FNL90_RS09250	COG2514	catechol 2,3-dioxygenase activity
FNL90_RS09260	COG0602	queuosine metabolic process
FNL90_RS09280	COG1328	CTP reductase activity
FNL90_RS09310	COG1393	Belongs to the ArsC family
FNL90_RS09325	COG0519	Catalyzes the synthesis of GMP from XMP
FNL90_RS09370	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FNL90_RS09375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FNL90_RS09380	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FNL90_RS09460	COG1511	domain protein
FNL90_RS09480	COG0305	Participates in initiation and elongation during chromosome replication
FNL90_RS09510	COG1760	l-serine dehydratase
FNL90_RS09515	COG1760	l-serine dehydratase
FNL90_RS09520	COG0741	lytic transglycosylase activity
FNL90_RS09525	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FNL90_RS09540	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FNL90_RS09550	COG0612	Peptidase, M16
FNL90_RS09570	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FNL90_RS09590	COG0517	IMP dehydrogenase activity
FNL90_RS09590	COG0516	GMP reductase activity
FNL90_RS09600	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FNL90_RS09605	COG0488	(ABC) transporter
FNL90_RS09640	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain