locus-tag class description SP5448_RS00005 PF00308 Bacterial dnaA protein SP5448_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SP5448_RS00010 PF02767 DNA polymerase III beta subunit, central domain SP5448_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SP5448_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SP5448_RS00020 PF06071 Protein of unknown function (DUF933) SP5448_RS00020 PF01926 50S ribosome-binding GTPase SP5448_RS00025 PF01195 Peptidyl-tRNA hydrolase SP5448_RS00030 PF03461 TRCF domain SP5448_RS00030 PF00271 Helicase conserved C-terminal domain SP5448_RS00030 PF17757 UvrB interaction domain SP5448_RS00030 PF00270 DEAD/DEAH box helicase SP5448_RS00030 PF02559 CarD-like/TRCF domain SP5448_RS00035 PF01479 S4 domain SP5448_RS00050 PF01171 PP-loop family SP5448_RS00055 PF00156 Phosphoribosyl transferase domain SP5448_RS00060 PF01434 Peptidase family M41 SP5448_RS00060 PF06480 FtsH Extracellular SP5448_RS00060 PF17862 AAA+ lid domain SP5448_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) SP5448_RS00065 PF13520 Amino acid permease SP5448_RS00175 PF01476 LysM domain SP5448_RS00175 PF05257 CHAP domain SP5448_RS00180 PF14572 Phosphoribosyl synthetase-associated domain SP5448_RS00180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SP5448_RS00185 PF11967 Recombination protein O N terminal SP5448_RS00185 PF02565 Recombination protein O C terminal SP5448_RS00190 PF02504 Fatty acid synthesis protein SP5448_RS00195 PF00550 Phosphopantetheine attachment site SP5448_RS00200 PF01259 SAICAR synthetase SP5448_RS00205 PF00586 AIR synthase related protein, N-terminal domain SP5448_RS00205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SP5448_RS00205 PF02769 AIR synthase related protein, C-terminal domain SP5448_RS00210 PF00156 Phosphoribosyl transferase domain SP5448_RS00210 PF13537 Glutamine amidotransferase domain SP5448_RS00215 PF00586 AIR synthase related protein, N-terminal domain SP5448_RS00215 PF02769 AIR synthase related protein, C-terminal domain SP5448_RS00220 PF00551 Formyl transferase SP5448_RS00225 PF01808 AICARFT/IMPCHase bienzyme SP5448_RS00225 PF02142 MGS-like domain SP5448_RS00235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SP5448_RS00235 PF02843 Phosphoribosylglycinamide synthetase, C domain SP5448_RS00235 PF02844 Phosphoribosylglycinamide synthetase, N domain SP5448_RS00240 PF00731 AIR carboxylase SP5448_RS00245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SP5448_RS00245 PF02222 ATP-grasp domain SP5448_RS00255 PF00206 Lyase SP5448_RS00255 PF10397 Adenylosuccinate lyase C-terminus SP5448_RS00265 PF17864 RuvB AAA lid domain SP5448_RS00265 PF05491 RuvB C-terminal winged helix domain SP5448_RS00265 PF05496 Holliday junction DNA helicase RuvB P-loop domain SP5448_RS00270 PF01451 Low molecular weight phosphotyrosine protein phosphatase SP5448_RS00280 PF01757 Acyltransferase family SP5448_RS00285 PF00465 Iron-containing alcohol dehydrogenase SP5448_RS00285 PF00171 Aldehyde dehydrogenase family SP5448_RS00290 PF00107 Zinc-binding dehydrogenase SP5448_RS00290 PF08240 Alcohol dehydrogenase GroES-like domain SP5448_RS00295 PF01554 MatE SP5448_RS00300 PF00338 Ribosomal protein S10p/S20e SP5448_RS00305 PF00297 Ribosomal protein L3 SP5448_RS00310 PF00573 Ribosomal protein L4/L1 family SP5448_RS00315 PF00276 Ribosomal protein L23 SP5448_RS00320 PF00181 Ribosomal Proteins L2, RNA binding domain SP5448_RS00320 PF03947 Ribosomal Proteins L2, C-terminal domain SP5448_RS00325 PF00203 Ribosomal protein S19 SP5448_RS00330 PF00237 Ribosomal protein L22p/L17e SP5448_RS00335 PF00189 Ribosomal protein S3, C-terminal domain SP5448_RS00335 PF07650 KH domain SP5448_RS00340 PF00252 Ribosomal protein L16p/L10e SP5448_RS00345 PF00831 Ribosomal L29 protein SP5448_RS00350 PF00366 Ribosomal protein S17 SP5448_RS00355 PF00238 Ribosomal protein L14p/L23e SP5448_RS00360 PF00467 KOW motif SP5448_RS00360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SP5448_RS00365 PF00281 Ribosomal protein L5 SP5448_RS00365 PF00673 ribosomal L5P family C-terminus SP5448_RS00370 PF00253 Ribosomal protein S14p/S29e SP5448_RS00375 PF00410 Ribosomal protein S8 SP5448_RS00380 PF00347 Ribosomal protein L6 SP5448_RS00385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SP5448_RS00390 PF03719 Ribosomal protein S5, C-terminal domain SP5448_RS00390 PF00333 Ribosomal protein S5, N-terminal domain SP5448_RS00395 PF00327 Ribosomal protein L30p/L7e SP5448_RS00400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SP5448_RS00405 PF00344 SecY translocase SP5448_RS00415 PF01176 Translation initiation factor 1A / IF-1 SP5448_RS00420 PF00416 Ribosomal protein S13/S18 SP5448_RS00425 PF00411 Ribosomal protein S11 SP5448_RS00430 PF01000 RNA polymerase Rpb3/RpoA insert domain SP5448_RS00430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SP5448_RS00430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SP5448_RS00435 PF01196 Ribosomal protein L17 SP5448_RS00530 PF08544 GHMP kinases C terminal SP5448_RS00530 PF00288 GHMP kinases N terminal domain SP5448_RS00535 PF01047 MarR family SP5448_RS00540 PF00005 ABC transporter SP5448_RS00545 PF00950 ABC 3 transport family SP5448_RS00555 PF01479 S4 domain SP5448_RS00555 PF00579 tRNA synthetases class I (W and Y) SP5448_RS00560 PF00905 Penicillin binding protein transpeptidase domain SP5448_RS00560 PF00912 Transglycosylase SP5448_RS00565 PF10385 RNA polymerase beta subunit external 1 domain SP5448_RS00565 PF04560 RNA polymerase Rpb2, domain 7 SP5448_RS00565 PF04561 RNA polymerase Rpb2, domain 2 SP5448_RS00565 PF04563 RNA polymerase beta subunit SP5448_RS00565 PF00562 RNA polymerase Rpb2, domain 6 SP5448_RS00565 PF04565 RNA polymerase Rpb2, domain 3 SP5448_RS00570 PF04998 RNA polymerase Rpb1, domain 5 SP5448_RS00570 PF05000 RNA polymerase Rpb1, domain 4 SP5448_RS00570 PF04983 RNA polymerase Rpb1, domain 3 SP5448_RS00570 PF04997 RNA polymerase Rpb1, domain 1 SP5448_RS00570 PF00623 RNA polymerase Rpb1, domain 2 SP5448_RS00580 PF00437 Type II/IV secretion system protein SP5448_RS00585 PF00482 Type II secretion system (T2SS), protein F SP5448_RS00590 PF07963 Prokaryotic N-terminal methylation motif SP5448_RS00620 PF00871 Acetokinase family SP5448_RS00630 PF03807 NADP oxidoreductase coenzyme F420-dependent SP5448_RS00630 PF14748 Pyrroline-5-carboxylate reductase dimerisation SP5448_RS00635 PF05343 M42 glutamyl aminopeptidase SP5448_RS00645 PF00085 Thioredoxin SP5448_RS00650 PF01588 Putative tRNA binding domain SP5448_RS00650 PF14794 Domain of unknown function (DUF4479) SP5448_RS00655 PF00436 Single-strand binding protein family SP5448_RS00660 PF01712 Deoxynucleoside kinase SP5448_RS00665 PF01207 Dihydrouridine synthase (Dus) SP5448_RS00670 PF01430 Hsp33 protein SP5448_RS00680 PF08341 Thioester domain SP5448_RS00680 PF17802 Prealbumin-like fold domain SP5448_RS00690 PF12892 Spy0128-like isopeptide containing domain SP5448_RS00695 PF04203 Sortase domain SP5448_RS00705 PF03050 Transposase IS66 family SP5448_RS00705 PF13817 IS66 C-terminal element SP5448_RS00705 PF13007 Transposase C of IS166 homeodomain SP5448_RS00705 PF13005 zinc-finger binding domain of transposase IS66 SP5448_RS00730 PF02667 Short chain fatty acid transporter SP5448_RS00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SP5448_RS00740 PF03466 LysR substrate binding domain SP5448_RS00745 PF00108 Thiolase, N-terminal domain SP5448_RS00745 PF02803 Thiolase, C-terminal domain SP5448_RS00750 PF01144 Coenzyme A transferase SP5448_RS00755 PF01144 Coenzyme A transferase SP5448_RS00765 PF01042 Endoribonuclease L-PSP SP5448_RS00780 PF01496 V-type ATPase 116kDa subunit family SP5448_RS00785 PF00137 ATP synthase subunit C SP5448_RS00795 PF01992 ATP synthase (C/AC39) subunit SP5448_RS00800 PF01990 ATP synthase (F/14-kDa) subunit SP5448_RS00805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP5448_RS00805 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP5448_RS00805 PF16886 ATPsynthase alpha/beta subunit N-term extension SP5448_RS00810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP5448_RS00810 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP5448_RS00815 PF01813 ATP synthase subunit D SP5448_RS00830 PF00709 Adenylosuccinate synthetase SP5448_RS00835 PF02608 ABC transporter substrate-binding protein PnrA-like SP5448_RS00840 PF00467 KOW motif SP5448_RS00840 PF02357 Transcription termination factor nusG SP5448_RS00855 PF01289 Thiol-activated cytolysin SP5448_RS00855 PF17440 Thiol-activated cytolysin beta sandwich domain SP5448_RS00875 PF01053 Cys/Met metabolism PLP-dependent enzyme SP5448_RS00880 PF09334 tRNA synthetases class I (M) SP5448_RS00880 PF13603 Leucyl-tRNA synthetase, Domain 2 SP5448_RS00880 PF08264 Anticodon-binding domain of tRNA SP5448_RS00880 PF00133 tRNA synthetases class I (I, L, M and V) SP5448_RS00885 PF03611 PTS system sugar-specific permease component SP5448_RS00890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS00895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP5448_RS00900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SP5448_RS00905 PF01261 Xylose isomerase-like TIM barrel SP5448_RS00910 PF00596 Class II Aldolase and Adducin N-terminal domain SP5448_RS00925 PF00005 ABC transporter SP5448_RS00925 PF00571 CBS domain SP5448_RS00930 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS00935 PF00476 DNA polymerase family A SP5448_RS00935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SP5448_RS00935 PF01367 5'-3' exonuclease, C-terminal SAM fold SP5448_RS00945 PF01475 Ferric uptake regulator family SP5448_RS00955 PF01507 Phosphoadenosine phosphosulfate reductase family SP5448_RS00955 PF11922 Domain of unknown function (DUF3440) SP5448_RS00960 PF02195 ParB-like nuclease domain SP5448_RS00970 PF13333 Integrase core domain SP5448_RS00970 PF13276 HTH-like domain SP5448_RS00970 PF00665 Integrase core domain SP5448_RS00975 PF00665 Integrase core domain SP5448_RS00975 PF13276 HTH-like domain SP5448_RS00975 PF13333 Integrase core domain SP5448_RS00990 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SP5448_RS00990 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SP5448_RS00995 PF13333 Integrase core domain SP5448_RS00995 PF00665 Integrase core domain SP5448_RS00995 PF13276 HTH-like domain SP5448_RS01010 PF01702 Queuine tRNA-ribosyltransferase SP5448_RS01015 PF02632 BioY family SP5448_RS01020 PF12706 Beta-lactamase superfamily domain SP5448_RS01025 PF14437 MafB19-like deaminase SP5448_RS01035 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SP5448_RS01035 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SP5448_RS01040 PF00342 Phosphoglucose isomerase SP5448_RS01050 PF13808 DDE_Tnp_1-associated SP5448_RS01050 PF01609 Transposase DDE domain SP5448_RS01065 PF01694 Rhomboid family SP5448_RS01070 PF00483 Nucleotidyl transferase SP5448_RS01075 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SP5448_RS01075 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SP5448_RS01085 PF00005 ABC transporter SP5448_RS01085 PF00664 ABC transporter transmembrane region SP5448_RS01090 PF00005 ABC transporter SP5448_RS01090 PF00664 ABC transporter transmembrane region SP5448_RS01095 PF02677 Epoxyqueuosine reductase QueH SP5448_RS01100 PF00692 dUTPase SP5448_RS01105 PF18073 Rubredoxin metal binding domain SP5448_RS01110 PF00484 Carbonic anhydrase SP5448_RS01115 PF01987 Mitochondrial biogenesis AIM24 SP5448_RS01120 PF00749 tRNA synthetases class I (E and Q), catalytic domain SP5448_RS01125 PF17203 Single cache domain 3 SP5448_RS01125 PF00989 PAS fold SP5448_RS01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS01125 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SP5448_RS01140 PF00825 Ribonuclease P SP5448_RS01145 PF02096 60Kd inner membrane protein SP5448_RS01150 PF01424 R3H domain SP5448_RS01150 PF14804 Jag N-terminus SP5448_RS01155 PF00468 Ribosomal protein L34 SP5448_RS01160 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SP5448_RS01170 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS01175 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS01185 PF00701 Dihydrodipicolinate synthetase family SP5448_RS01190 PF00480 ROK family SP5448_RS01200 PF01026 TatD related DNase SP5448_RS01205 PF13331 Domain of unknown function (DUF4093) SP5448_RS01210 PF00398 Ribosomal RNA adenine dimethylase SP5448_RS01215 PF16745 RsgA N-terminal domain SP5448_RS01215 PF03193 RsgA GTPase SP5448_RS01220 PF00834 Ribulose-phosphate 3 epimerase family SP5448_RS01225 PF04263 Thiamin pyrophosphokinase, catalytic domain SP5448_RS01225 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SP5448_RS01230 PF02646 RmuC family SP5448_RS01235 PF01966 HD domain SP5448_RS01240 PF09182 Bacterial purine repressor, N-terminal SP5448_RS01240 PF00156 Phosphoribosyl transferase domain SP5448_RS01250 PF00164 Ribosomal protein S12/S23 SP5448_RS01255 PF00177 Ribosomal protein S7p/S5e SP5448_RS01260 PF03144 Elongation factor Tu domain 2 SP5448_RS01260 PF00009 Elongation factor Tu GTP binding domain SP5448_RS01260 PF00679 Elongation factor G C-terminus SP5448_RS01260 PF03764 Elongation factor G, domain IV SP5448_RS01260 PF14492 Elongation Factor G, domain II SP5448_RS01265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SP5448_RS01265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SP5448_RS01270 PF00005 ABC transporter SP5448_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS01285 PF02673 Bacitracin resistance protein BacA SP5448_RS01290 PF05389 Negative regulator of genetic competence (MecA) SP5448_RS01295 PF00953 Glycosyl transferase family 4 SP5448_RS01300 PF00005 ABC transporter SP5448_RS01305 PF01458 Uncharacterized protein family (UPF0051) SP5448_RS01310 PF00266 Aminotransferase class-V SP5448_RS01315 PF01592 NifU-like N terminal domain SP5448_RS01320 PF01458 Uncharacterized protein family (UPF0051) SP5448_RS01325 PF00768 D-alanyl-D-alanine carboxypeptidase SP5448_RS01325 PF07943 Penicillin-binding protein 5, C-terminal domain SP5448_RS01330 PF00768 D-alanyl-D-alanine carboxypeptidase SP5448_RS01330 PF07943 Penicillin-binding protein 5, C-terminal domain SP5448_RS01335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SP5448_RS01340 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS01345 PF12911 N-terminal TM domain of oligopeptide transport permease C SP5448_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS01350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SP5448_RS01350 PF00005 ABC transporter SP5448_RS01355 PF00005 ABC transporter SP5448_RS01355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SP5448_RS01400 PF01416 tRNA pseudouridine synthase SP5448_RS01405 PF08543 Phosphomethylpyrimidine kinase SP5448_RS01410 PF07155 ECF-type riboflavin transporter, S component SP5448_RS01415 PF04260 Protein of unknown function (DUF436) SP5448_RS01420 PF00924 Mechanosensitive ion channel SP5448_RS01425 PF05697 Bacterial trigger factor protein (TF) SP5448_RS01425 PF05698 Bacterial trigger factor protein (TF) C-terminus SP5448_RS01425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SP5448_RS01430 PF05066 HB1, ASXL, restriction endonuclease HTH domain SP5448_RS01435 PF06418 CTP synthase N-terminus SP5448_RS01435 PF00117 Glutamine amidotransferase class-I SP5448_RS01450 PF01116 Fructose-bisphosphate aldolase class-II SP5448_RS01455 PF00830 Ribosomal L28 family SP5448_RS01460 PF13808 DDE_Tnp_1-associated SP5448_RS01460 PF01609 Transposase DDE domain SP5448_RS01470 PF03780 Asp23 family, cell envelope-related function SP5448_RS01475 PF02734 DAK2 domain SP5448_RS01475 PF13684 Dihydroxyacetone kinase family SP5448_RS01485 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SP5448_RS01490 PF00162 Phosphoglycerate kinase SP5448_RS01500 PF13411 MerR HTH family regulatory protein SP5448_RS01505 PF03951 Glutamine synthetase, beta-Grasp domain SP5448_RS01505 PF00120 Glutamine synthetase, catalytic domain SP5448_RS01510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SP5448_RS01510 PF17770 Ribonuclease J C-terminal domain SP5448_RS01510 PF00753 Metallo-beta-lactamase superfamily SP5448_RS01515 PF07288 Protein of unknown function (DUF1447) SP5448_RS01520 PF00814 Glycoprotease family SP5448_RS01525 PF00583 Acetyltransferase (GNAT) family SP5448_RS01530 PF00814 Glycoprotease family SP5448_RS01535 PF00253 Ribosomal protein S14p/S29e SP5448_RS01545 PF01048 Phosphorylase superfamily SP5448_RS01550 PF01773 Na+ dependent nucleoside transporter N-terminus SP5448_RS01550 PF07662 Na+ dependent nucleoside transporter C-terminus SP5448_RS01550 PF07670 Nucleoside recognition SP5448_RS01555 PF01791 DeoC/LacD family aldolase SP5448_RS01565 PF08279 HTH domain SP5448_RS01565 PF04394 Protein of unknown function, DUF536 SP5448_RS01575 PF13411 MerR HTH family regulatory protein SP5448_RS01575 PF07739 TipAS antibiotic-recognition domain SP5448_RS01580 PF02575 YbaB/EbfC DNA-binding family SP5448_RS01595 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SP5448_RS01595 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SP5448_RS01595 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SP5448_RS01600 PF13545 Crp-like helix-turn-helix domain SP5448_RS01605 PF07690 Major Facilitator Superfamily SP5448_RS01610 PF00230 Major intrinsic protein SP5448_RS01625 PF00144 Beta-lactamase SP5448_RS01630 PF02901 Pyruvate formate lyase-like SP5448_RS01630 PF01228 Glycine radical SP5448_RS01635 PF11798 IMS family HHH motif SP5448_RS01635 PF11799 impB/mucB/samB family C-terminal domain SP5448_RS01635 PF00817 impB/mucB/samB family SP5448_RS01645 PF14490 Helix-hairpin-helix containing domain SP5448_RS01645 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SP5448_RS01645 PF13538 UvrD-like helicase C-terminal domain SP5448_RS01650 PF10502 Signal peptidase, peptidase S26 SP5448_RS01655 PF01351 Ribonuclease HII SP5448_RS01655 PF11858 Domain of unknown function (DUF3378) SP5448_RS01670 PF00488 MutS domain V SP5448_RS01670 PF01713 Smr domain SP5448_RS01680 PF00085 Thioredoxin SP5448_RS01685 PF01381 Helix-turn-helix SP5448_RS01690 PF00730 HhH-GPD superfamily base excision DNA repair protein SP5448_RS01690 PF14815 NUDIX domain SP5448_RS01700 PF01250 Ribosomal protein S6 SP5448_RS01705 PF00436 Single-strand binding protein family SP5448_RS01710 PF01084 Ribosomal protein S18 SP5448_RS01725 PF00005 ABC transporter SP5448_RS01725 PF17755 UvrA DNA-binding domain SP5448_RS01725 PF17760 UvrA interaction domain SP5448_RS01730 PF00557 Metallopeptidase family M24 SP5448_RS01730 PF01321 Creatinase/Prolidase N-terminal domain SP5448_RS01735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SP5448_RS01740 PF01132 Elongation factor P (EF-P) OB domain SP5448_RS01740 PF08207 Elongation factor P (EF-P) KOW-like domain SP5448_RS01740 PF09285 Elongation factor P, C-terminal SP5448_RS01745 PF03780 Asp23 family, cell envelope-related function SP5448_RS01750 PF01029 NusB family SP5448_RS01755 PF00356 Bacterial regulatory proteins, lacI family SP5448_RS01760 PF08244 Glycosyl hydrolases family 32 C terminal SP5448_RS01760 PF00251 Glycosyl hydrolases family 32 N-terminal domain SP5448_RS01765 PF00367 phosphotransferase system, EIIB SP5448_RS01765 PF02378 Phosphotransferase system, EIIC SP5448_RS01765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP5448_RS01775 PF00480 ROK family SP5448_RS01780 PF01238 Phosphomannose isomerase type I SP5448_RS01785 PF01609 Transposase DDE domain SP5448_RS01785 PF13808 DDE_Tnp_1-associated SP5448_RS01800 PF07517 SecA DEAD-like domain SP5448_RS01800 PF07516 SecA Wing and Scaffold domain SP5448_RS01800 PF02810 SEC-C motif SP5448_RS01800 PF01043 SecA preprotein cross-linking domain SP5448_RS01805 PF01648 4'-phosphopantetheinyl transferase superfamily SP5448_RS01810 PF01168 Alanine racemase, N-terminal domain SP5448_RS01810 PF00842 Alanine racemase, C-terminal domain SP5448_RS01815 PF05257 CHAP domain SP5448_RS01815 PF01476 LysM domain SP5448_RS01830 PF01497 Periplasmic binding protein SP5448_RS01835 PF01032 FecCD transport family SP5448_RS01840 PF00005 ABC transporter SP5448_RS01845 PF00664 ABC transporter transmembrane region SP5448_RS01845 PF00005 ABC transporter SP5448_RS01850 PF00664 ABC transporter transmembrane region SP5448_RS01850 PF00005 ABC transporter SP5448_RS01865 PF00005 ABC transporter SP5448_RS01870 PF00271 Helicase conserved C-terminal domain SP5448_RS01870 PF00270 DEAD/DEAH box helicase SP5448_RS01870 PF17191 RecG wedge domain SP5448_RS01875 PF00005 ABC transporter SP5448_RS01885 PF17763 Glutaminase/Asparaginase C-terminal domain SP5448_RS01885 PF00710 Asparaginase, N-terminal SP5448_RS01900 PF00155 Aminotransferase class I and II SP5448_RS01905 PF08222 CodY helix-turn-helix domain SP5448_RS01905 PF06018 CodY GAF-like domain SP5448_RS01910 PF00857 Isochorismatase family SP5448_RS01915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SP5448_RS01915 PF02896 PEP-utilising enzyme, TIM barrel domain SP5448_RS01915 PF00391 PEP-utilising enzyme, mobile domain SP5448_RS01920 PF02686 Glu-tRNAGln amidotransferase C subunit SP5448_RS01925 PF01425 Amidase SP5448_RS01930 PF02934 GatB/GatE catalytic domain SP5448_RS01930 PF02637 GatB domain SP5448_RS01940 PF04226 Transglycosylase associated protein SP5448_RS01945 PF00300 Histidine phosphatase superfamily (branch 1) SP5448_RS01960 PF01628 HrcA protein C terminal domain SP5448_RS01960 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SP5448_RS01965 PF01025 GrpE SP5448_RS01970 PF00012 Hsp70 protein SP5448_RS01975 PF00684 DnaJ central domain SP5448_RS01975 PF00226 DnaJ domain SP5448_RS01975 PF01556 DnaJ C terminal domain SP5448_RS01980 PF00378 Enoyl-CoA hydratase/isomerase SP5448_RS01990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SP5448_RS01990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SP5448_RS01995 PF00550 Phosphopantetheine attachment site SP5448_RS02000 PF03060 Nitronate monooxygenase SP5448_RS02005 PF00698 Acyl transferase domain SP5448_RS02015 PF00109 Beta-ketoacyl synthase, N-terminal domain SP5448_RS02015 PF02801 Beta-ketoacyl synthase, C-terminal domain SP5448_RS02020 PF00364 Biotin-requiring enzyme SP5448_RS02025 PF07977 FabA-like domain SP5448_RS02030 PF00289 Biotin carboxylase, N-terminal domain SP5448_RS02030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SP5448_RS02030 PF02785 Biotin carboxylase C-terminal domain SP5448_RS02035 PF01039 Carboxyl transferase domain SP5448_RS02035 PF17848 Acetyl-coA carboxylase zinc finger domain SP5448_RS02040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SP5448_RS02045 PF02403 Seryl-tRNA synthetase N-terminal domain SP5448_RS02045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SP5448_RS02055 PF03613 PTS system mannose/fructose/sorbose family IID component SP5448_RS02060 PF03609 PTS system sorbose-specific iic component SP5448_RS02065 PF03610 PTS system fructose IIA component SP5448_RS02065 PF03830 PTS system sorbose subfamily IIB component SP5448_RS02075 PF00860 Permease family SP5448_RS02080 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SP5448_RS02090 PF03816 Cell envelope-related transcriptional attenuator domain SP5448_RS02100 PF01230 HIT domain SP5448_RS02105 PF00005 ABC transporter SP5448_RS02110 PF05975 Bacterial ABC transporter protein EcsB SP5448_RS02120 PF02390 Putative methyltransferase SP5448_RS02130 PF00589 Phage integrase family SP5448_RS02130 PF02899 Phage integrase, N-terminal SAM-like domain SP5448_RS02225 PF01555 DNA methylase SP5448_RS02245 PF17288 Terminase RNAseH like domain SP5448_RS02245 PF04466 Phage terminase large subunit SP5448_RS02365 PF13457 GW (Gly-Tryp) dipeptide domain SP5448_RS02365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SP5448_RS02380 PF17384 RimP C-terminal SH3 domain SP5448_RS02380 PF02576 RimP N-terminal domain SP5448_RS02385 PF08529 NusA N-terminal domain SP5448_RS02385 PF00575 S1 RNA binding domain SP5448_RS02385 PF13184 NusA-like KH domain SP5448_RS02390 PF04296 Protein of unknown function (DUF448) SP5448_RS02395 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SP5448_RS02400 PF00009 Elongation factor Tu GTP binding domain SP5448_RS02400 PF04760 Translation initiation factor IF-2, N-terminal region SP5448_RS02400 PF11987 Translation-initiation factor 2 SP5448_RS02405 PF02033 Ribosome-binding factor A SP5448_RS02410 PF07859 alpha/beta hydrolase fold SP5448_RS02415 PF03965 Penicillinase repressor SP5448_RS02420 PF00403 Heavy-metal-associated domain SP5448_RS02430 PF08220 DeoR-like helix-turn-helix domain SP5448_RS02430 PF00455 DeoR C terminal sensor domain SP5448_RS02450 PF02502 Ribose/Galactose Isomerase SP5448_RS02455 PF02502 Ribose/Galactose Isomerase SP5448_RS02460 PF00294 pfkB family carbohydrate kinase SP5448_RS02465 PF01791 DeoC/LacD family aldolase SP5448_RS02470 PF03458 UPF0126 domain SP5448_RS02480 PF00440 Bacterial regulatory proteins, tetR family SP5448_RS02485 PF02645 Uncharacterised protein, DegV family COG1307 SP5448_RS02495 PF02690 Na+/Pi-cotransporter SP5448_RS02500 PF01979 Amidohydrolase family SP5448_RS02505 PF00248 Aldo/keto reductase family SP5448_RS02510 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SP5448_RS02515 PF02091 Glycyl-tRNA synthetase alpha subunit SP5448_RS02520 PF02092 Glycyl-tRNA synthetase beta subunit SP5448_RS02525 PF05979 Bacterial protein of unknown function (DUF896) SP5448_RS02530 PF03413 Peptidase propeptide and YPEB domain SP5448_RS02535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SP5448_RS02535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SP5448_RS02540 PF01266 FAD dependent oxidoreductase SP5448_RS02540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SP5448_RS02545 PF00230 Major intrinsic protein SP5448_RS02550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP5448_RS02550 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS02560 PF00923 Transaldolase/Fructose-6-phosphate aldolase SP5448_RS02565 PF02779 Transketolase, pyrimidine binding domain SP5448_RS02565 PF02780 Transketolase, C-terminal domain SP5448_RS02565 PF00456 Transketolase, thiamine diphosphate binding domain SP5448_RS02575 PF00005 ABC transporter SP5448_RS02585 PF00696 Amino acid kinase family SP5448_RS02590 PF00171 Aldehyde dehydrogenase family SP5448_RS02605 PF01795 MraW methylase family SP5448_RS02615 PF03793 PASTA domain SP5448_RS02615 PF03717 Penicillin-binding Protein dimerisation domain SP5448_RS02615 PF00905 Penicillin binding protein transpeptidase domain SP5448_RS02620 PF00953 Glycosyl transferase family 4 SP5448_RS02620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SP5448_RS02625 PF00270 DEAD/DEAH box helicase SP5448_RS02625 PF00271 Helicase conserved C-terminal domain SP5448_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS02635 PF00005 ABC transporter SP5448_RS02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS02650 PF00324 Amino acid permease SP5448_RS02655 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SP5448_RS02655 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SP5448_RS02655 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SP5448_RS02660 PF02540 NAD synthase SP5448_RS02665 PF03051 Peptidase C1-like family SP5448_RS02670 PF00912 Transglycosylase SP5448_RS02670 PF00905 Penicillin binding protein transpeptidase domain SP5448_RS02675 PF03838 Recombination protein U SP5448_RS02680 PF06908 YspA SLOG family SP5448_RS02685 PF05103 DivIVA protein SP5448_RS02690 PF01170 Putative RNA methylase family UPF0020 SP5448_RS02690 PF02926 THUMP domain SP5448_RS02695 PF18708 MapZ extracellular C-terminal domain 2 SP5448_RS02695 PF18041 MapZ extracellular domain 1 SP5448_RS02700 PF02664 S-Ribosylhomocysteinase (LuxS) SP5448_RS02715 PF01144 Coenzyme A transferase SP5448_RS02720 PF01144 Coenzyme A transferase SP5448_RS02725 PF02803 Thiolase, C-terminal domain SP5448_RS02725 PF00108 Thiolase, N-terminal domain SP5448_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SP5448_RS02730 PF03466 LysR substrate binding domain SP5448_RS02735 PF01966 HD domain SP5448_RS02735 PF00013 KH domain SP5448_RS02735 PF12072 Domain of unknown function (DUF3552) SP5448_RS02740 PF00625 Guanylate kinase SP5448_RS02745 PF01192 RNA polymerase Rpb6 SP5448_RS02750 PF04851 Type III restriction enzyme, res subunit SP5448_RS02750 PF17764 3′ DNA-binding domain (3′BD) SP5448_RS02750 PF18074 Primosomal protein N C-terminal domain SP5448_RS02750 PF00271 Helicase conserved C-terminal domain SP5448_RS02750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SP5448_RS02755 PF02911 Formyl transferase, C-terminal domain SP5448_RS02755 PF00551 Formyl transferase SP5448_RS02760 PF01029 NusB family SP5448_RS02760 PF01189 16S rRNA methyltransferase RsmB/F SP5448_RS02770 PF03793 PASTA domain SP5448_RS02770 PF00069 Protein kinase domain SP5448_RS02780 PF07730 Histidine kinase SP5448_RS02780 PF00672 HAMP domain SP5448_RS02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS02785 PF00072 Response regulator receiver domain SP5448_RS02785 PF00196 Bacterial regulatory proteins, luxR family SP5448_RS02790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SP5448_RS02795 PF00575 S1 RNA binding domain SP5448_RS02800 PF00291 Pyridoxal-phosphate dependent enzyme SP5448_RS02805 PF09186 Domain of unknown function (DUF1949) SP5448_RS02805 PF01205 Uncharacterized protein family UPF0029 SP5448_RS02810 PF04851 Type III restriction enzyme, res subunit SP5448_RS02810 PF00271 Helicase conserved C-terminal domain SP5448_RS02820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SP5448_RS02820 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SP5448_RS02865 PF04167 Protein of unknown function (DUF402) SP5448_RS02870 PF02631 RecX family SP5448_RS02875 PF05958 tRNA (Uracil-5-)-methyltransferase SP5448_RS02875 PF01938 TRAM domain SP5448_RS02885 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SP5448_RS02885 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SP5448_RS02885 PF07748 Glycosyl hydrolases family 38 C-terminal domain SP5448_RS02885 PF01074 Glycosyl hydrolases family 38 N-terminal domain SP5448_RS02885 PF09261 Alpha mannosidase middle domain SP5448_RS02895 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS02900 PF02838 Glycosyl hydrolase family 20, domain 2 SP5448_RS02900 PF07555 beta-N-acetylglucosaminidase SP5448_RS02905 PF00232 Glycosyl hydrolase family 1 SP5448_RS02910 PF00480 ROK family SP5448_RS02915 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS02925 PF12010 Domain of unknown function (DUF3502) SP5448_RS02935 PF06580 Histidine kinase SP5448_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS02935 PF00672 HAMP domain SP5448_RS02935 PF02743 Cache domain SP5448_RS02940 PF00072 Response regulator receiver domain SP5448_RS02940 PF12833 Helix-turn-helix domain SP5448_RS02945 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 SP5448_RS02945 PF02837 Glycosyl hydrolases family 2, sugar binding domain SP5448_RS02945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SP5448_RS02945 PF00703 Glycosyl hydrolases family 2 SP5448_RS02945 PF16355 Domain of unknown function (DUF4982) SP5448_RS02950 PF08501 Shikimate dehydrogenase substrate binding domain SP5448_RS02950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SP5448_RS02955 PF13649 Methyltransferase domain SP5448_RS02970 PF01761 3-dehydroquinate synthase SP5448_RS02975 PF00793 DAHP synthetase I family SP5448_RS02975 PF01817 Chorismate mutase type II SP5448_RS03005 PF00133 tRNA synthetases class I (I, L, M and V) SP5448_RS03005 PF08264 Anticodon-binding domain of tRNA SP5448_RS03005 PF10458 Valyl tRNA synthetase tRNA binding arm SP5448_RS03035 PF01867 CRISPR associated protein Cas1 SP5448_RS03040 PF09827 CRISPR associated protein Cas2 SP5448_RS03045 PF02683 Cytochrome C biogenesis protein transmembrane region SP5448_RS03050 PF08534 Redoxin SP5448_RS03055 PF01641 SelR domain SP5448_RS03055 PF01625 Peptide methionine sulfoxide reductase SP5448_RS03060 PF12833 Helix-turn-helix domain SP5448_RS03060 PF00072 Response regulator receiver domain SP5448_RS03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS03065 PF00672 HAMP domain SP5448_RS03065 PF02743 Cache domain SP5448_RS03065 PF06580 Histidine kinase SP5448_RS03080 PF01316 Arginine repressor, DNA binding domain SP5448_RS03080 PF02863 Arginine repressor, C-terminal domain SP5448_RS03095 PF13673 Acetyltransferase (GNAT) domain SP5448_RS03100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SP5448_RS03100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SP5448_RS03105 PF03606 C4-dicarboxylate anaerobic carrier SP5448_RS03110 PF01546 Peptidase family M20/M25/M40 SP5448_RS03115 PF00696 Amino acid kinase family SP5448_RS03120 PF03590 Aspartate-ammonia ligase SP5448_RS03130 PF01467 Cytidylyltransferase-like SP5448_RS03135 PF05362 Lon protease (S16) C-terminal proteolytic domain SP5448_RS03135 PF13180 PDZ domain SP5448_RS03145 PF06265 Protein of unknown function (DUF1027) SP5448_RS03150 PF04055 Radical SAM superfamily SP5448_RS03160 PF00210 Ferritin-like domain SP5448_RS03170 PF00480 ROK family SP5448_RS03175 PF00581 Rhodanese-like domain SP5448_RS03180 PF14492 Elongation Factor G, domain II SP5448_RS03180 PF00679 Elongation factor G C-terminus SP5448_RS03180 PF00009 Elongation factor Tu GTP binding domain SP5448_RS03180 PF03144 Elongation factor Tu domain 2 SP5448_RS03190 PF02875 Mur ligase family, glutamate ligase domain SP5448_RS03190 PF08245 Mur ligase middle domain SP5448_RS03195 PF03033 Glycosyltransferase family 28 N-terminal domain SP5448_RS03195 PF04101 Glycosyltransferase family 28 C-terminal domain SP5448_RS03200 PF08478 POTRA domain, FtsQ-type SP5448_RS03205 PF02491 SHS2 domain inserted in FTSA SP5448_RS03205 PF11983 Membrane-attachment and polymerisation-promoting switch SP5448_RS03210 PF12327 FtsZ family, C-terminal domain SP5448_RS03210 PF00091 Tubulin/FtsZ family, GTPase domain SP5448_RS03215 PF01168 Alanine racemase, N-terminal domain SP5448_RS03220 PF04472 Cell division protein SepF SP5448_RS03230 PF17774 Putative RNA-binding domain in YlmH SP5448_RS03230 PF01479 S4 domain SP5448_RS03235 PF05103 DivIVA protein SP5448_RS03240 PF00133 tRNA synthetases class I (I, L, M and V) SP5448_RS03240 PF08264 Anticodon-binding domain of tRNA SP5448_RS03250 PF00293 NUDIX domain SP5448_RS03255 PF00004 ATPase family associated with various cellular activities (AAA) SP5448_RS03255 PF17871 AAA lid domain SP5448_RS03255 PF07724 AAA domain (Cdc48 subfamily) SP5448_RS03255 PF10431 C-terminal, D2-small domain, of ClpB protein SP5448_RS03260 PF08796 Protein of unknown function (DUF1797) SP5448_RS03265 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS03270 PF00005 ABC transporter SP5448_RS03275 PF03441 FAD binding domain of DNA photolyase SP5448_RS03275 PF00875 DNA photolyase SP5448_RS03280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SP5448_RS03280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SP5448_RS03280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SP5448_RS03280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SP5448_RS03285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SP5448_RS03285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SP5448_RS03290 PF13742 OB-fold nucleic acid binding domain SP5448_RS03290 PF02601 Exonuclease VII, large subunit SP5448_RS03295 PF02609 Exonuclease VII small subunit SP5448_RS03300 PF00348 Polyprenyl synthetase SP5448_RS03305 PF01728 FtsJ-like methyltransferase SP5448_RS03305 PF01479 S4 domain SP5448_RS03310 PF01316 Arginine repressor, DNA binding domain SP5448_RS03310 PF02863 Arginine repressor, C-terminal domain SP5448_RS03315 PF13476 AAA domain SP5448_RS03325 PF02645 Uncharacterised protein, DegV family COG1307 SP5448_RS03330 PF13472 GDSL-like Lipase/Acylhydrolase family SP5448_RS03340 PF00216 Bacterial DNA-binding protein SP5448_RS03345 PF00589 Phage integrase family SP5448_RS03345 PF14659 Phage integrase, N-terminal SAM-like domain SP5448_RS03360 PF01381 Helix-turn-helix SP5448_RS03370 PF10548 P22AR C-terminal domain SP5448_RS03370 PF08346 AntA/AntB antirepressor SP5448_RS03410 PF07261 Replication initiation and membrane attachment SP5448_RS03430 PF03837 RecT family SP5448_RS03620 PF01180 Dihydroorotate dehydrogenase SP5448_RS03625 PF00300 Histidine phosphatase superfamily (branch 1) SP5448_RS03630 PF02829 3H domain SP5448_RS03630 PF08279 HTH domain SP5448_RS03640 PF01226 Formate/nitrite transporter SP5448_RS03645 PF03717 Penicillin-binding Protein dimerisation domain SP5448_RS03645 PF00905 Penicillin binding protein transpeptidase domain SP5448_RS03650 PF13662 Toprim domain SP5448_RS03650 PF02132 RecR protein SP5448_RS03655 PF07478 D-ala D-ala ligase C-terminus SP5448_RS03655 PF01820 D-ala D-ala ligase N-terminus SP5448_RS03660 PF01225 Mur ligase family, catalytic domain SP5448_RS03660 PF08245 Mur ligase middle domain SP5448_RS03660 PF02875 Mur ligase family, glutamate ligase domain SP5448_RS03670 PF03144 Elongation factor Tu domain 2 SP5448_RS03670 PF16658 Class II release factor RF3, C-terminal domain SP5448_RS03670 PF00009 Elongation factor Tu GTP binding domain SP5448_RS03675 PF00271 Helicase conserved C-terminal domain SP5448_RS03675 PF00270 DEAD/DEAH box helicase SP5448_RS03680 PF02705 K+ potassium transporter SP5448_RS03685 PF01541 GIY-YIG catalytic domain SP5448_RS03690 PF05175 Methyltransferase small domain SP5448_RS03695 PF01553 Acyltransferase SP5448_RS03700 PF10531 SLBB domain SP5448_RS03705 PF03772 Competence protein SP5448_RS03705 PF00753 Metallo-beta-lactamase superfamily SP5448_RS03705 PF13567 Domain of unknown function (DUF4131) SP5448_RS03715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SP5448_RS03715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SP5448_RS03740 PF02547 Queuosine biosynthesis protein SP5448_RS03745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SP5448_RS03750 PF00849 RNA pseudouridylate synthase SP5448_RS03750 PF01479 S4 domain SP5448_RS03760 PF08439 Oligopeptidase F SP5448_RS03760 PF01432 Peptidase family M3 SP5448_RS03765 PF07690 Major Facilitator Superfamily SP5448_RS03770 PF01596 O-methyltransferase SP5448_RS03775 PF13145 PPIC-type PPIASE domain SP5448_RS03780 PF02272 DHHA1 domain SP5448_RS03780 PF01411 tRNA synthetases class II (A) SP5448_RS03780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SP5448_RS03785 PF01381 Helix-turn-helix SP5448_RS03800 PF13276 HTH-like domain SP5448_RS03800 PF13333 Integrase core domain SP5448_RS03800 PF00665 Integrase core domain SP5448_RS03810 PF13276 HTH-like domain SP5448_RS03810 PF00665 Integrase core domain SP5448_RS03810 PF13333 Integrase core domain SP5448_RS03825 PF00268 Ribonucleotide reductase, small chain SP5448_RS03830 PF08343 Ribonucleotide reductase N-terminal SP5448_RS03830 PF00317 Ribonucleotide reductase, all-alpha domain SP5448_RS03830 PF02867 Ribonucleotide reductase, barrel domain SP5448_RS03835 PF00462 Glutaredoxin SP5448_RS03840 PF00381 PTS HPr component phosphorylation site SP5448_RS03845 PF05524 PEP-utilising enzyme, N-terminal SP5448_RS03845 PF02896 PEP-utilising enzyme, TIM barrel domain SP5448_RS03845 PF00391 PEP-utilising enzyme, mobile domain SP5448_RS03850 PF00171 Aldehyde dehydrogenase family SP5448_RS03855 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SP5448_RS03855 PF01522 Polysaccharide deacetylase SP5448_RS03860 PF00270 DEAD/DEAH box helicase SP5448_RS03860 PF00271 Helicase conserved C-terminal domain SP5448_RS03865 PF00485 Phosphoribulokinase / Uridine kinase family SP5448_RS03880 PF13185 GAF domain SP5448_RS03885 PF12169 DNA polymerase III subunits gamma and tau domain III SP5448_RS03890 PF03099 Biotin/lipoate A/B protein ligase family SP5448_RS03890 PF02237 Biotin protein ligase C terminal domain SP5448_RS03890 PF08279 HTH domain SP5448_RS03900 PF00438 S-adenosylmethionine synthetase, N-terminal domain SP5448_RS03900 PF02772 S-adenosylmethionine synthetase, central domain SP5448_RS03900 PF02773 S-adenosylmethionine synthetase, C-terminal domain SP5448_RS03905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SP5448_RS03910 PF00746 LPXTG cell wall anchor motif SP5448_RS03910 PF17573 GA-like domain SP5448_RS03910 PF17573 GA-like domain SP5448_RS03910 PF01378 B domain SP5448_RS03910 PF00746 LPXTG cell wall anchor motif SP5448_RS03910 PF01378 B domain SP5448_RS03920 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS03920 PF00571 CBS domain SP5448_RS03920 PF07085 DRTGG domain SP5448_RS03920 PF03061 Thioesterase superfamily SP5448_RS03925 PF00557 Metallopeptidase family M24 SP5448_RS03935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SP5448_RS03940 PF01202 Shikimate kinase SP5448_RS03945 PF03816 Cell envelope-related transcriptional attenuator domain SP5448_RS03950 PF01938 TRAM domain SP5448_RS03950 PF05958 tRNA (Uracil-5-)-methyltransferase SP5448_RS03965 PF08903 Domain of unknown function (DUF1846) SP5448_RS03970 PF07690 Major Facilitator Superfamily SP5448_RS03980 PF01479 S4 domain SP5448_RS03980 PF00849 RNA pseudouridylate synthase SP5448_RS03985 PF13276 HTH-like domain SP5448_RS03985 PF00665 Integrase core domain SP5448_RS03985 PF13333 Integrase core domain SP5448_RS03995 PF09269 Domain of unknown function (DUF1967) SP5448_RS03995 PF01018 GTP1/OBG SP5448_RS03995 PF01926 50S ribosome-binding GTPase SP5448_RS04010 PF00232 Glycosyl hydrolase family 1 SP5448_RS04020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP5448_RS04020 PF08279 HTH domain SP5448_RS04020 PF00874 PRD domain SP5448_RS04020 PF05043 Mga helix-turn-helix domain SP5448_RS04025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS04030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP5448_RS04040 PF02378 Phosphotransferase system, EIIC SP5448_RS04045 PF00005 ABC transporter SP5448_RS04050 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP5448_RS04055 PF17757 UvrB interaction domain SP5448_RS04055 PF12344 Ultra-violet resistance protein B SP5448_RS04055 PF04851 Type III restriction enzyme, res subunit SP5448_RS04055 PF00271 Helicase conserved C-terminal domain SP5448_RS04055 PF02151 UvrB/uvrC motif SP5448_RS04065 PF13193 AMP-binding enzyme C-terminal domain SP5448_RS04065 PF00501 AMP-binding enzyme SP5448_RS04070 PF03062 MBOAT, membrane-bound O-acyltransferase family SP5448_RS04075 PF00550 Phosphopantetheine attachment site SP5448_RS04080 PF04914 DltD protein SP5448_RS04085 PF00934 PE family SP5448_RS04085 PF07859 alpha/beta hydrolase fold SP5448_RS04095 PF13416 Bacterial extracellular solute-binding protein SP5448_RS04100 PF02903 Alpha amylase, N-terminal ig-like domain SP5448_RS04100 PF00128 Alpha amylase, catalytic domain SP5448_RS04105 PF00128 Alpha amylase, catalytic domain SP5448_RS04105 PF00686 Starch binding domain SP5448_RS04105 PF01833 IPT/TIG domain SP5448_RS04110 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04115 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04125 PF00356 Bacterial regulatory proteins, lacI family SP5448_RS04130 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04140 PF13416 Bacterial extracellular solute-binding protein SP5448_RS04145 PF00356 Bacterial regulatory proteins, lacI family SP5448_RS04145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SP5448_RS04150 PF02446 4-alpha-glucanotransferase SP5448_RS04155 PF00343 Carbohydrate phosphorylase SP5448_RS04240 PF00436 Single-strand binding protein family SP5448_RS04250 PF05866 Endodeoxyribonuclease RusA SP5448_RS04300 PF17288 Terminase RNAseH like domain SP5448_RS04300 PF04466 Phage terminase large subunit SP5448_RS04435 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SP5448_RS04435 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SP5448_RS04455 PF00005 ABC transporter SP5448_RS04460 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS04465 PF07733 Bacterial DNA polymerase III alpha NTPase domain SP5448_RS04465 PF02811 PHP domain SP5448_RS04465 PF14579 Helix-hairpin-helix motif SP5448_RS04465 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SP5448_RS04465 PF01336 OB-fold nucleic acid binding domain SP5448_RS04470 PF00365 Phosphofructokinase SP5448_RS04475 PF00224 Pyruvate kinase, barrel domain SP5448_RS04475 PF02887 Pyruvate kinase, alpha/beta domain SP5448_RS04480 PF10502 Signal peptidase, peptidase S26 SP5448_RS04485 PF01380 SIS domain SP5448_RS04490 PF08274 PhnA Zinc-Ribbon SP5448_RS04490 PF03831 PhnA domain SP5448_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04500 PF00005 ABC transporter SP5448_RS04505 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP5448_RS04510 PF07373 CAMP factor (Cfa) SP5448_RS04515 PF01545 Cation efflux family SP5448_RS04515 PF16916 Dimerisation domain of Zinc Transporter SP5448_RS04520 PF01235 Sodium:alanine symporter family SP5448_RS04525 PF13361 UvrD-like helicase C-terminal domain SP5448_RS04525 PF00580 UvrD/REP helicase N-terminal domain SP5448_RS04545 PF03780 Asp23 family, cell envelope-related function SP5448_RS04550 PF05532 CsbD-like SP5448_RS04555 PF03780 Asp23 family, cell envelope-related function SP5448_RS04570 PF12704 MacB-like periplasmic core domain SP5448_RS04570 PF02687 FtsX-like permease family SP5448_RS04570 PF00005 ABC transporter SP5448_RS04595 PF01509 TruB family pseudouridylate synthase (N terminal domain) SP5448_RS04595 PF16198 tRNA pseudouridylate synthase B C-terminal domain SP5448_RS04600 PF01687 Riboflavin kinase SP5448_RS04600 PF06574 FAD synthetase SP5448_RS04605 PF03960 ArsC family SP5448_RS04610 PF05256 Uncharacterised protein family (UPF0223) SP5448_RS04615 PF00459 Inositol monophosphatase family SP5448_RS04620 PF01189 16S rRNA methyltransferase RsmB/F SP5448_RS04620 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SP5448_RS04620 PF17126 RsmF rRNA methyltransferase first C-terminal domain SP5448_RS04625 PF12849 PBP superfamily domain SP5448_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04635 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS04640 PF00005 ABC transporter SP5448_RS04645 PF00005 ABC transporter SP5448_RS04650 PF01895 PhoU domain SP5448_RS04655 PF01433 Peptidase family M1 domain SP5448_RS04655 PF11838 ERAP1-like C-terminal domain SP5448_RS04660 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS04660 PF00072 Response regulator receiver domain SP5448_RS04665 PF00512 His Kinase A (phospho-acceptor) domain SP5448_RS04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS04670 PF01649 Ribosomal protein S20 SP5448_RS04675 PF00485 Phosphoribulokinase / Uridine kinase family SP5448_RS04680 PF05175 Methyltransferase small domain SP5448_RS04685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SP5448_RS04690 PF02608 ABC transporter substrate-binding protein PnrA-like SP5448_RS04695 PF00005 ABC transporter SP5448_RS04700 PF02653 Branched-chain amino acid transport system / permease component SP5448_RS04705 PF02653 Branched-chain amino acid transport system / permease component SP5448_RS04710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SP5448_RS04710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SP5448_RS04710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SP5448_RS04710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SP5448_RS04715 PF12822 ECF transporter, substrate-specific component SP5448_RS04720 PF02441 Flavoprotein SP5448_RS04725 PF04127 DNA / pantothenate metabolism flavoprotein SP5448_RS04725 PF02441 Flavoprotein SP5448_RS04730 PF03099 Biotin/lipoate A/B protein ligase family SP5448_RS04735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SP5448_RS04740 PF00296 Luciferase-like monooxygenase SP5448_RS04745 PF01597 Glycine cleavage H-protein SP5448_RS04750 PF01661 Macro domain SP5448_RS04760 PF10437 Bacterial lipoate protein ligase C-terminus SP5448_RS04760 PF03099 Biotin/lipoate A/B protein ligase family SP5448_RS04765 PF01268 Formate--tetrahydrofolate ligase SP5448_RS04770 PF13091 PLD-like domain SP5448_RS04775 PF13597 Anaerobic ribonucleoside-triphosphate reductase SP5448_RS04775 PF03477 ATP cone domain SP5448_RS04780 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS04780 PF00155 Aminotransferase class I and II SP5448_RS04785 PF02581 Thiamine monophosphate synthase SP5448_RS04785 PF08543 Phosphomethylpyrimidine kinase SP5448_RS04795 PF00005 ABC transporter SP5448_RS04795 PF12848 ABC transporter SP5448_RS04805 PF02540 NAD synthase SP5448_RS04805 PF00958 GMP synthase C terminal domain SP5448_RS04805 PF00117 Glutamine amidotransferase class-I SP5448_RS04815 PF07702 UTRA domain SP5448_RS04815 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS04820 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SP5448_RS04825 PF02881 SRP54-type protein, helical bundle domain SP5448_RS04825 PF00448 SRP54-type protein, GTPase domain SP5448_RS04825 PF02978 Signal peptide binding domain SP5448_RS04835 PF13495 Phage integrase, N-terminal SAM-like domain SP5448_RS04835 PF00589 Phage integrase family SP5448_RS04845 PF08218 Citrate lyase ligase C-terminal domain SP5448_RS04850 PF00364 Biotin-requiring enzyme SP5448_RS04850 PF00682 HMGL-like SP5448_RS04850 PF02436 Conserved carboxylase domain SP5448_RS04855 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SP5448_RS04860 PF04223 Citrate lyase, alpha subunit (CitF) SP5448_RS04865 PF03328 HpcH/HpaI aldolase/citrate lyase family SP5448_RS04870 PF06857 Malonate decarboxylase delta subunit (MdcD) SP5448_RS04880 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SP5448_RS04885 PF00364 Biotin-requiring enzyme SP5448_RS04895 PF03600 Citrate transporter SP5448_RS04905 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SP5448_RS04910 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SP5448_RS04915 PF00364 Biotin-requiring enzyme SP5448_RS04925 PF00364 Biotin-requiring enzyme SP5448_RS04925 PF02436 Conserved carboxylase domain SP5448_RS04925 PF00682 HMGL-like SP5448_RS04930 PF01134 Glucose inhibited division protein A SP5448_RS04945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SP5448_RS04945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SP5448_RS04960 PF01751 Toprim domain SP5448_RS04960 PF01396 Topoisomerase DNA binding C4 zinc finger SP5448_RS04960 PF01131 DNA topoisomerase SP5448_RS04965 PF18255 DNA processing protein A sterile alpha motif domain SP5448_RS04965 PF02481 DNA recombination-mediator protein A SP5448_RS04970 PF01351 Ribonuclease HII SP5448_RS04975 PF01926 50S ribosome-binding GTPase SP5448_RS04985 PF03006 Haemolysin-III related SP5448_RS05000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SP5448_RS05005 PF04203 Sortase domain SP5448_RS05010 PF03989 DNA gyrase C-terminal domain, beta-propeller SP5448_RS05010 PF00521 DNA gyrase/topoisomerase IV, subunit A SP5448_RS05015 PF00056 lactate/malate dehydrogenase, NAD binding domain SP5448_RS05015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SP5448_RS05020 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS05020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP5448_RS05025 PF00005 ABC transporter SP5448_RS05025 PF00664 ABC transporter transmembrane region SP5448_RS05030 PF00005 ABC transporter SP5448_RS05030 PF00664 ABC transporter transmembrane region SP5448_RS05045 PF00464 Serine hydroxymethyltransferase SP5448_RS05060 PF05175 Methyltransferase small domain SP5448_RS05065 PF03462 PCRF domain SP5448_RS05065 PF00472 RF-1 domain SP5448_RS05070 PF00265 Thymidine kinase SP5448_RS05075 PF01361 Tautomerase enzyme SP5448_RS05080 PF02424 ApbE family SP5448_RS05085 PF00860 Permease family SP5448_RS05090 PF00156 Phosphoribosyl transferase domain SP5448_RS05095 PF00478 IMP dehydrogenase / GMP reductase domain SP5448_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS05105 PF00571 CBS domain SP5448_RS05105 PF00005 ABC transporter SP5448_RS05120 PF01515 Phosphate acetyl/butaryl transferase SP5448_RS05125 PF00849 RNA pseudouridylate synthase SP5448_RS05125 PF01479 S4 domain SP5448_RS05130 PF01513 ATP-NAD kinase SP5448_RS05135 PF04607 Region found in RelA / SpoT proteins SP5448_RS05145 PF14572 Phosphoribosyl synthetase-associated domain SP5448_RS05145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SP5448_RS05150 PF00266 Aminotransferase class-V SP5448_RS05160 PF02629 CoA binding domain SP5448_RS05160 PF06971 Putative DNA-binding protein N-terminus SP5448_RS05165 PF07722 Peptidase C26 SP5448_RS05170 PF04002 RadC-like JAB domain SP5448_RS05175 PF01594 AI-2E family transporter SP5448_RS05185 PF00654 Voltage gated chloride channel SP5448_RS05190 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SP5448_RS05195 PF08240 Alcohol dehydrogenase GroES-like domain SP5448_RS05195 PF00107 Zinc-binding dehydrogenase SP5448_RS05195 PF13823 Alcohol dehydrogenase GroES-associated SP5448_RS05200 PF03949 Malic enzyme, NAD binding domain SP5448_RS05200 PF00390 Malic enzyme, N-terminal domain SP5448_RS05205 PF03390 2-hydroxycarboxylate transporter family SP5448_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS05210 PF00989 PAS fold SP5448_RS05210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SP5448_RS05210 PF17203 Single cache domain 3 SP5448_RS05215 PF00072 Response regulator receiver domain SP5448_RS05220 PF13416 Bacterial extracellular solute-binding protein SP5448_RS05225 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS05230 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS05235 PF08402 TOBE domain SP5448_RS05235 PF00005 ABC transporter SP5448_RS05240 PF01565 FAD binding domain SP5448_RS05240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SP5448_RS05245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SP5448_RS05250 PF02152 Dihydroneopterin aldolase SP5448_RS05255 PF00809 Pterin binding enzyme SP5448_RS05260 PF01227 GTP cyclohydrolase I SP5448_RS05265 PF08245 Mur ligase middle domain SP5448_RS05265 PF02875 Mur ligase family, glutamate ligase domain SP5448_RS05275 PF00768 D-alanyl-D-alanine carboxypeptidase SP5448_RS05275 PF07943 Penicillin-binding protein 5, C-terminal domain SP5448_RS05305 PF01381 Helix-turn-helix SP5448_RS05320 PF00005 ABC transporter SP5448_RS05325 PF00005 ABC transporter SP5448_RS05335 PF00512 His Kinase A (phospho-acceptor) domain SP5448_RS05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS05340 PF00072 Response regulator receiver domain SP5448_RS05340 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS05355 PF00145 C-5 cytosine-specific DNA methylase SP5448_RS05365 PF16320 Ribosomal protein L7/L12 dimerisation domain SP5448_RS05365 PF00542 Ribosomal protein L7/L12 C-terminal domain SP5448_RS05370 PF00466 Ribosomal protein L10 SP5448_RS05375 PF01926 50S ribosome-binding GTPase SP5448_RS05375 PF12631 MnmE helical domain SP5448_RS05375 PF10396 GTP-binding protein TrmE N-terminus SP5448_RS05380 PF01546 Peptidase family M20/M25/M40 SP5448_RS05385 PF00881 Nitroreductase family SP5448_RS05390 PF01541 GIY-YIG catalytic domain SP5448_RS05390 PF08459 UvrC Helix-hairpin-helix N-terminal SP5448_RS05390 PF02151 UvrB/uvrC motif SP5448_RS05395 PF00171 Aldehyde dehydrogenase family SP5448_RS05400 PF13419 Haloacid dehalogenase-like hydrolase SP5448_RS05405 PF12464 Maltose acetyltransferase SP5448_RS05405 PF14602 Hexapeptide repeat of succinyl-transferase SP5448_RS05405 PF00132 Bacterial transferase hexapeptide (six repeats) SP5448_RS05420 PF00072 Response regulator receiver domain SP5448_RS05420 PF12833 Helix-turn-helix domain SP5448_RS05425 PF06580 Histidine kinase SP5448_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS05430 PF03613 PTS system mannose/fructose/sorbose family IID component SP5448_RS05435 PF03609 PTS system sorbose-specific iic component SP5448_RS05440 PF03830 PTS system sorbose subfamily IIB component SP5448_RS05450 PF03601 Conserved hypothetical protein 698 SP5448_RS05455 PF01641 SelR domain SP5448_RS05460 PF00746 LPXTG cell wall anchor motif SP5448_RS05460 PF02370 M protein repeat SP5448_RS05465 PF00009 Elongation factor Tu GTP binding domain SP5448_RS05465 PF06421 GTP-binding protein LepA C-terminus SP5448_RS05465 PF14492 Elongation Factor G, domain II SP5448_RS05465 PF03144 Elongation factor Tu domain 2 SP5448_RS05465 PF00679 Elongation factor G C-terminus SP5448_RS05470 PF00334 Nucleoside diphosphate kinase SP5448_RS05480 PF09711 CRISPR-associated protein (Cas_Csn2) SP5448_RS05485 PF09827 CRISPR associated protein Cas2 SP5448_RS05490 PF01867 CRISPR associated protein Cas1 SP5448_RS05495 PF13395 HNH endonuclease SP5448_RS05495 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 SP5448_RS05495 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 SP5448_RS05495 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 SP5448_RS05505 PF13344 Haloacid dehalogenase-like hydrolase SP5448_RS05515 PF04055 Radical SAM superfamily SP5448_RS05515 PF06969 HemN C-terminal domain SP5448_RS05525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SP5448_RS05525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SP5448_RS05525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SP5448_RS05525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SP5448_RS05535 PF02457 DisA bacterial checkpoint controller nucleotide-binding SP5448_RS05540 PF08245 Mur ligase middle domain SP5448_RS05540 PF08353 Domain of unknown function (DUF1727) SP5448_RS05545 PF07685 CobB/CobQ-like glutamine amidotransferase domain SP5448_RS05550 PF10437 Bacterial lipoate protein ligase C-terminus SP5448_RS05550 PF03099 Biotin/lipoate A/B protein ligase family SP5448_RS05555 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SP5448_RS05555 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SP5448_RS05555 PF02278 Polysaccharide lyase family 8, super-sandwich domain SP5448_RS05560 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS05560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP5448_RS05570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SP5448_RS05570 PF00364 Biotin-requiring enzyme SP5448_RS05570 PF02817 e3 binding domain SP5448_RS05575 PF02780 Transketolase, C-terminal domain SP5448_RS05575 PF02779 Transketolase, pyrimidine binding domain SP5448_RS05575 PF00364 Biotin-requiring enzyme SP5448_RS05580 PF00676 Dehydrogenase E1 component SP5448_RS05585 PF00005 ABC transporter SP5448_RS05585 PF16326 ABC transporter C-terminal domain SP5448_RS05585 PF12848 ABC transporter SP5448_RS05595 PF00756 Putative esterase SP5448_RS05600 PF00753 Metallo-beta-lactamase superfamily SP5448_RS05600 PF17770 Ribonuclease J C-terminal domain SP5448_RS05600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SP5448_RS05605 PF00005 ABC transporter SP5448_RS05625 PF05670 NFACT protein RNA binding domain SP5448_RS05635 PF01594 AI-2E family transporter SP5448_RS05640 PF00293 NUDIX domain SP5448_RS05645 PF16363 GDP-mannose 4,6 dehydratase SP5448_RS05650 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SP5448_RS05655 PF00483 Nucleotidyl transferase SP5448_RS05660 PF01266 FAD dependent oxidoreductase SP5448_RS05665 PF01784 NIF3 (NGG1p interacting factor 3) SP5448_RS05670 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SP5448_RS05675 PF00633 Helix-hairpin-helix motif SP5448_RS05675 PF00730 HhH-GPD superfamily base excision DNA repair protein SP5448_RS05675 PF10576 Iron-sulfur binding domain of endonuclease III SP5448_RS05685 PF00156 Phosphoribosyl transferase domain SP5448_RS05690 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SP5448_RS05690 PF01368 DHH family SP5448_RS05690 PF02272 DHHA1 domain SP5448_RS05690 PF17768 RecJ OB domain SP5448_RS05695 PF00106 short chain dehydrogenase SP5448_RS05700 PF00753 Metallo-beta-lactamase superfamily SP5448_RS05700 PF12706 Beta-lactamase superfamily domain SP5448_RS05705 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SP5448_RS05705 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SP5448_RS05710 PF01926 50S ribosome-binding GTPase SP5448_RS05710 PF13167 GTP-binding GTPase N-terminal SP5448_RS05710 PF16360 GTP-binding GTPase Middle Region SP5448_RS05730 PF17773 UPF0176 acylphosphatase like domain SP5448_RS05730 PF00581 Rhodanese-like domain SP5448_RS05730 PF12368 Rhodanase C-terminal SP5448_RS05745 PF00575 S1 RNA binding domain SP5448_RS05765 PF01063 Amino-transferase class IV SP5448_RS05770 PF03989 DNA gyrase C-terminal domain, beta-propeller SP5448_RS05770 PF00521 DNA gyrase/topoisomerase IV, subunit A SP5448_RS05775 PF01751 Toprim domain SP5448_RS05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS05775 PF00204 DNA gyrase B SP5448_RS05775 PF00986 DNA gyrase B subunit, carboxyl terminus SP5448_RS05780 PF02660 Glycerol-3-phosphate acyltransferase SP5448_RS05785 PF01979 Amidohydrolase family SP5448_RS05790 PF03167 Uracil DNA glycosylase superfamily SP5448_RS05795 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS05800 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP5448_RS05805 PF01425 Amidase SP5448_RS05810 PF00156 Phosphoribosyl transferase domain SP5448_RS05815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SP5448_RS05825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SP5448_RS05825 PF03466 LysR substrate binding domain SP5448_RS05835 PF01048 Phosphorylase superfamily SP5448_RS05840 PF01048 Phosphorylase superfamily SP5448_RS05845 PF03960 ArsC family SP5448_RS05850 PF01676 Metalloenzyme superfamily SP5448_RS05855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SP5448_RS05860 PF10431 C-terminal, D2-small domain, of ClpB protein SP5448_RS05860 PF17871 AAA lid domain SP5448_RS05860 PF07724 AAA domain (Cdc48 subfamily) SP5448_RS05860 PF00004 ATPase family associated with various cellular activities (AAA) SP5448_RS05870 PF01926 50S ribosome-binding GTPase SP5448_RS05875 PF06689 ClpX C4-type zinc finger SP5448_RS05875 PF10431 C-terminal, D2-small domain, of ClpB protein SP5448_RS05875 PF07724 AAA domain (Cdc48 subfamily) SP5448_RS05885 PF00186 Dihydrofolate reductase SP5448_RS05890 PF00303 Thymidylate synthase SP5448_RS05895 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SP5448_RS05895 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SP5448_RS05900 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SP5448_RS05905 PF01070 FMN-dependent dehydrogenase SP5448_RS05910 PF00288 GHMP kinases N terminal domain SP5448_RS05910 PF08544 GHMP kinases C terminal SP5448_RS05920 PF10509 Galactokinase galactose-binding signature SP5448_RS05920 PF08544 GHMP kinases C terminal SP5448_RS05920 PF00288 GHMP kinases N terminal domain SP5448_RS05925 PF00512 His Kinase A (phospho-acceptor) domain SP5448_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS05930 PF00072 Response regulator receiver domain SP5448_RS05930 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS05935 PF04607 Region found in RelA / SpoT proteins SP5448_RS05940 PF00149 Calcineurin-like phosphoesterase SP5448_RS05940 PF17936 Bacterial Ig domain SP5448_RS05940 PF02872 5'-nucleotidase, C-terminal domain SP5448_RS05945 PF01327 Polypeptide deformylase SP5448_RS05955 PF00005 ABC transporter SP5448_RS05955 PF12848 ABC transporter SP5448_RS05955 PF16326 ABC transporter C-terminal domain SP5448_RS05960 PF13735 tRNA nucleotidyltransferase domain 2 putative SP5448_RS05960 PF12627 Probable RNA and SrmB- binding site of polymerase A SP5448_RS05960 PF01743 Poly A polymerase head domain SP5448_RS05965 PF02645 Uncharacterised protein, DegV family COG1307 SP5448_RS05975 PF00334 Nucleoside diphosphate kinase SP5448_RS05980 PF09028 Mac 1 SP5448_RS05985 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SP5448_RS05985 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SP5448_RS05990 PF00665 Integrase core domain SP5448_RS05990 PF13333 Integrase core domain SP5448_RS05995 PF01476 LysM domain SP5448_RS05995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SP5448_RS06000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SP5448_RS06000 PF01476 LysM domain SP5448_RS06005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS06005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP5448_RS06010 PF00294 pfkB family carbohydrate kinase SP5448_RS06015 PF08220 DeoR-like helix-turn-helix domain SP5448_RS06015 PF00455 DeoR C terminal sensor domain SP5448_RS06020 PF02558 Ketopantoate reductase PanE/ApbA SP5448_RS06020 PF08546 Ketopantoate reductase PanE/ApbA C terminal SP5448_RS06030 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS06035 PF01746 tRNA (Guanine-1)-methyltransferase SP5448_RS06040 PF05239 PRC-barrel domain SP5448_RS06040 PF01782 RimM N-terminal domain SP5448_RS06070 PF00886 Ribosomal protein S16 SP5448_RS06075 PF03009 Glycerophosphoryl diester phosphodiesterase family SP5448_RS06080 PF02687 FtsX-like permease family SP5448_RS06080 PF12704 MacB-like periplasmic core domain SP5448_RS06085 PF00005 ABC transporter SP5448_RS06090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SP5448_RS06095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SP5448_RS06095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SP5448_RS06095 PF02142 MGS-like domain SP5448_RS06100 PF00117 Glutamine amidotransferase class-I SP5448_RS06100 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SP5448_RS06105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SP5448_RS06105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SP5448_RS06110 PF00860 Permease family SP5448_RS06115 PF00156 Phosphoribosyl transferase domain SP5448_RS06120 PF01479 S4 domain SP5448_RS06120 PF00849 RNA pseudouridylate synthase SP5448_RS06125 PF01252 Signal peptidase (SPase) II SP5448_RS06130 PF03466 LysR substrate binding domain SP5448_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SP5448_RS06135 PF01016 Ribosomal L27 protein SP5448_RS06145 PF00829 Ribosomal prokaryotic L21 protein SP5448_RS06150 PF09587 Bacterial capsule synthesis protein PGA_cap SP5448_RS06155 PF02568 Thiamine biosynthesis protein (ThiI) SP5448_RS06155 PF02926 THUMP domain SP5448_RS06160 PF00266 Aminotransferase class-V SP5448_RS06170 PF08245 Mur ligase middle domain SP5448_RS06170 PF02875 Mur ligase family, glutamate ligase domain SP5448_RS06175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SP5448_RS06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS06180 PF06133 Control of competence regulator ComK, YlbF/YmcA SP5448_RS06185 PF01264 Chorismate synthase SP5448_RS06190 PF01487 Type I 3-dehydroquinase SP5448_RS06195 PF10672 S-adenosylmethionine-dependent methyltransferase SP5448_RS06195 PF17785 PUA-like domain SP5448_RS06200 PF00884 Sulfatase SP5448_RS06205 PF00453 Ribosomal protein L20 SP5448_RS06210 PF01632 Ribosomal protein L35 SP5448_RS06215 PF05198 Translation initiation factor IF-3, N-terminal domain SP5448_RS06215 PF00707 Translation initiation factor IF-3, C-terminal domain SP5448_RS06220 PF02224 Cytidylate kinase SP5448_RS06235 PF01546 Peptidase family M20/M25/M40 SP5448_RS06235 PF07687 Peptidase dimerisation domain SP5448_RS06255 PF00535 Glycosyl transferase family 2 SP5448_RS06270 PF00535 Glycosyl transferase family 2 SP5448_RS06275 PF00005 ABC transporter SP5448_RS06285 PF00535 Glycosyl transferase family 2 SP5448_RS06285 PF02709 N-terminal domain of galactosyltransferase SP5448_RS06295 PF04321 RmlD substrate binding domain SP5448_RS06300 PF01883 Iron-sulfur cluster assembly protein SP5448_RS06305 PF04539 Sigma-70 region 3 SP5448_RS06305 PF04542 Sigma-70 region 2 SP5448_RS06305 PF00140 Sigma-70 factor, region 1.2 SP5448_RS06305 PF04545 Sigma-70, region 4 SP5448_RS06305 PF03979 Sigma-70 factor, region 1.1 SP5448_RS06310 PF08275 DNA primase catalytic core, N-terminal domain SP5448_RS06310 PF01807 CHC2 zinc finger SP5448_RS06310 PF10410 DnaB-helicase binding domain of primase SP5448_RS06315 PF01741 Large-conductance mechanosensitive channel, MscL SP5448_RS06320 PF01165 Ribosomal protein S21 SP5448_RS06325 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP5448_RS06330 PF12705 PD-(D/E)XK nuclease superfamily SP5448_RS06330 PF13361 UvrD-like helicase C-terminal domain SP5448_RS06330 PF00580 UvrD/REP helicase N-terminal domain SP5448_RS06335 PF12705 PD-(D/E)XK nuclease superfamily SP5448_RS06340 PF04228 Putative neutral zinc metallopeptidase SP5448_RS06345 PF00005 ABC transporter SP5448_RS06350 PF02687 FtsX-like permease family SP5448_RS06365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SP5448_RS06365 PF03484 tRNA synthetase B5 domain SP5448_RS06365 PF03147 Ferredoxin-fold anticodon binding domain SP5448_RS06365 PF01588 Putative tRNA binding domain SP5448_RS06365 PF03483 B3/4 domain SP5448_RS06370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SP5448_RS06370 PF01409 tRNA synthetases class II core domain (F) SP5448_RS06375 PF01223 DNA/RNA non-specific endonuclease SP5448_RS06385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SP5448_RS06395 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SP5448_RS06395 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SP5448_RS06400 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP5448_RS06400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP5448_RS06405 PF00231 ATP synthase SP5448_RS06410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SP5448_RS06410 PF02874 ATP synthase alpha/beta family, beta-barrel domain SP5448_RS06410 PF00306 ATP synthase alpha/beta chain, C terminal domain SP5448_RS06415 PF00213 ATP synthase delta (OSCP) subunit SP5448_RS06420 PF00430 ATP synthase B/B' CF(0) SP5448_RS06425 PF00119 ATP synthase A chain SP5448_RS06430 PF00137 ATP synthase subunit C SP5448_RS06435 PF00781 Diacylglycerol kinase catalytic domain SP5448_RS06440 PF03120 NAD-dependent DNA ligase OB-fold domain SP5448_RS06440 PF01653 NAD-dependent DNA ligase adenylation domain SP5448_RS06440 PF12826 Helix-hairpin-helix motif SP5448_RS06440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SP5448_RS06440 PF00533 BRCA1 C Terminus (BRCT) domain SP5448_RS06445 PF06177 QueT transporter SP5448_RS06465 PF00005 ABC transporter SP5448_RS06520 PF00113 Enolase, C-terminal TIM barrel domain SP5448_RS06520 PF03952 Enolase, N-terminal domain SP5448_RS06530 PF06160 Septation ring formation regulator, EzrA SP5448_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS06535 PF00986 DNA gyrase B subunit, carboxyl terminus SP5448_RS06535 PF00204 DNA gyrase B SP5448_RS06535 PF01751 Toprim domain SP5448_RS06550 PF01245 Ribosomal protein L19 SP5448_RS06555 PF00654 Voltage gated chloride channel SP5448_RS06565 PF00258 Flavodoxin SP5448_RS06570 PF01368 DHH family SP5448_RS06570 PF02272 DHHA1 domain SP5448_RS06575 PF01197 Ribosomal protein L31 SP5448_RS06580 PF01380 SIS domain SP5448_RS06585 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS06585 PF07702 UTRA domain SP5448_RS06590 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SP5448_RS06590 PF01297 Zinc-uptake complex component A periplasmic SP5448_RS06595 PF03577 Peptidase family C69 SP5448_RS06600 PF10298 WhiA N-terminal LAGLIDADG-like domain SP5448_RS06600 PF14527 WhiA LAGLIDADG-like domain SP5448_RS06600 PF02650 WhiA C-terminal HTH domain SP5448_RS06605 PF01933 Uncharacterised protein family UPF0052 SP5448_RS06610 PF03668 P-loop ATPase protein family SP5448_RS06615 PF01336 OB-fold nucleic acid binding domain SP5448_RS06615 PF00152 tRNA synthetases class II (D, K and N) SP5448_RS06620 PF00155 Aminotransferase class I and II SP5448_RS06625 PF13307 Helicase C-terminal domain SP5448_RS06625 PF00929 Exonuclease SP5448_RS06625 PF04851 Type III restriction enzyme, res subunit SP5448_RS06630 PF00106 short chain dehydrogenase SP5448_RS06635 PF00753 Metallo-beta-lactamase superfamily SP5448_RS06640 PF18075 FtsX extracellular domain SP5448_RS06640 PF02687 FtsX-like permease family SP5448_RS06645 PF00005 ABC transporter SP5448_RS06650 PF03462 PCRF domain SP5448_RS06650 PF00472 RF-1 domain SP5448_RS06655 PF08331 Domain of unknown function (DUF1730) SP5448_RS06660 PF13419 Haloacid dehalogenase-like hydrolase SP5448_RS06665 PF01081 KDPG and KHG aldolase SP5448_RS06690 PF07470 Glycosyl Hydrolase Family 88 SP5448_RS06695 PF03830 PTS system sorbose subfamily IIB component SP5448_RS06700 PF03609 PTS system sorbose-specific iic component SP5448_RS06705 PF03613 PTS system mannose/fructose/sorbose family IID component SP5448_RS06715 PF00356 Bacterial regulatory proteins, lacI family SP5448_RS06720 PF00690 Cation transporter/ATPase, N-terminus SP5448_RS06720 PF00689 Cation transporting ATPase, C-terminus SP5448_RS06730 PF01966 HD domain SP5448_RS06755 PF00121 Triosephosphate isomerase SP5448_RS06760 PF03143 Elongation factor Tu C-terminal domain SP5448_RS06760 PF03144 Elongation factor Tu domain 2 SP5448_RS06760 PF00009 Elongation factor Tu GTP binding domain SP5448_RS06765 PF01098 Cell cycle protein SP5448_RS06770 PF00311 Phosphoenolpyruvate carboxylase SP5448_RS06775 PF08439 Oligopeptidase F SP5448_RS06775 PF01432 Peptidase family M3 SP5448_RS06780 PF00255 Glutathione peroxidase SP5448_RS06800 PF09515 Thiamine transporter protein (Thia_YuaJ) SP5448_RS06820 PF01336 OB-fold nucleic acid binding domain SP5448_RS06820 PF00152 tRNA synthetases class II (D, K and N) SP5448_RS06830 PF02229 Transcriptional Coactivator p15 (PC4) SP5448_RS06835 PF01136 Peptidase family U32 SP5448_RS06835 PF16325 Peptidase family U32 C-terminal domain SP5448_RS06850 PF12732 YtxH-like protein SP5448_RS06860 PF01790 Prolipoprotein diacylglyceryl transferase SP5448_RS06865 PF07475 HPr Serine kinase C-terminal domain SP5448_RS06865 PF02603 HPr Serine kinase N terminus SP5448_RS06875 PF10263 SprT-like family SP5448_RS06880 PF17674 HHH domain SP5448_RS06880 PF09371 Tex-like protein N-terminal domain SP5448_RS06880 PF16921 Tex protein YqgF-like domain SP5448_RS06880 PF00575 S1 RNA binding domain SP5448_RS06890 PF03773 Predicted permease SP5448_RS06895 PF09323 Domain of unknown function (DUF1980) SP5448_RS06900 PF00232 Glycosyl hydrolase family 1 SP5448_RS06905 PF02378 Phosphotransferase system, EIIC SP5448_RS06905 PF00367 phosphotransferase system, EIIB SP5448_RS06905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP5448_RS06910 PF03123 CAT RNA binding domain SP5448_RS06910 PF00874 PRD domain SP5448_RS06915 PF07690 Major Facilitator Superfamily SP5448_RS06920 PF02881 SRP54-type protein, helical bundle domain SP5448_RS06920 PF00448 SRP54-type protein, GTPase domain SP5448_RS06940 PF13683 Integrase core domain SP5448_RS06940 PF01610 Transposase SP5448_RS06955 PF17676 LD-carboxypeptidase C-terminal domain SP5448_RS06955 PF02016 LD-carboxypeptidase N-terminal domain SP5448_RS06960 PF00206 Lyase SP5448_RS06960 PF02655 ATP-grasp domain SP5448_RS06965 PF01336 OB-fold nucleic acid binding domain SP5448_RS06965 PF00152 tRNA synthetases class II (D, K and N) SP5448_RS06980 PF04860 Phage portal protein SP5448_RS07025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SP5448_RS07025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SP5448_RS07025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SP5448_RS07040 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) SP5448_RS07060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SP5448_RS07060 PF08501 Shikimate dehydrogenase substrate binding domain SP5448_RS07070 PF02463 RecF/RecN/SMC N terminal domain SP5448_RS07070 PF06470 SMC proteins Flexible Hinge Domain SP5448_RS07075 PF14622 Ribonuclease-III-like SP5448_RS07075 PF00035 Double-stranded RNA binding motif SP5448_RS07080 PF00753 Metallo-beta-lactamase superfamily SP5448_RS07085 PF13426 PAS domain SP5448_RS07085 PF00512 His Kinase A (phospho-acceptor) domain SP5448_RS07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS07085 PF00672 HAMP domain SP5448_RS07090 PF00072 Response regulator receiver domain SP5448_RS07090 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS07105 PF00108 Thiolase, N-terminal domain SP5448_RS07105 PF02803 Thiolase, C-terminal domain SP5448_RS07125 PF00005 ABC transporter SP5448_RS07130 PF03129 Anticodon binding domain SP5448_RS07130 PF02824 TGS domain SP5448_RS07130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SP5448_RS07130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SP5448_RS07135 PF00534 Glycosyl transferases group 1 SP5448_RS07135 PF13439 Glycosyltransferase Family 4 SP5448_RS07140 PF00534 Glycosyl transferases group 1 SP5448_RS07140 PF13439 Glycosyltransferase Family 4 SP5448_RS07145 PF00356 Bacterial regulatory proteins, lacI family SP5448_RS07150 PF01321 Creatinase/Prolidase N-terminal domain SP5448_RS07150 PF00557 Metallopeptidase family M24 SP5448_RS07155 PF00881 Nitroreductase family SP5448_RS07160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SP5448_RS07165 PF00535 Glycosyl transferase family 2 SP5448_RS07180 PF01470 Pyroglutamyl peptidase SP5448_RS07190 PF01668 SmpB protein SP5448_RS07195 PF08206 Ribonuclease B OB domain SP5448_RS07195 PF17876 Cold shock domain SP5448_RS07195 PF00575 S1 RNA binding domain SP5448_RS07195 PF00773 RNB domain SP5448_RS07205 PF00083 Sugar (and other) transporter SP5448_RS07205 PF07690 Major Facilitator Superfamily SP5448_RS07210 PF05872 Bacterial protein of unknown function (DUF853) SP5448_RS07215 PF01121 Dephospho-CoA kinase SP5448_RS07220 PF06827 Zinc finger found in FPG and IleRS SP5448_RS07220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SP5448_RS07220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SP5448_RS07280 PF13344 Haloacid dehalogenase-like hydrolase SP5448_RS07280 PF00293 NUDIX domain SP5448_RS07285 PF01926 50S ribosome-binding GTPase SP5448_RS07285 PF07650 KH domain SP5448_RS07290 PF01219 Prokaryotic diacylglycerol kinase SP5448_RS07295 PF02130 Uncharacterized protein family UPF0054 SP5448_RS07300 PF03167 Uracil DNA glycosylase superfamily SP5448_RS07305 PF02562 PhoH-like protein SP5448_RS07310 PF06100 MCRA family SP5448_RS07320 PF06855 YozE SAM-like fold SP5448_RS07325 PF01625 Peptide methionine sulfoxide reductase SP5448_RS07335 PF01765 Ribosome recycling factor SP5448_RS07340 PF00696 Amino acid kinase family SP5448_RS07345 PF00687 Ribosomal protein L1p/L10e family SP5448_RS07350 PF03946 Ribosomal protein L11, N-terminal domain SP5448_RS07350 PF00298 Ribosomal protein L11, RNA binding domain SP5448_RS07360 PF17854 FtsK alpha domain SP5448_RS07360 PF09397 Ftsk gamma domain SP5448_RS07360 PF01580 FtsK/SpoIIIE family SP5448_RS07365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SP5448_RS07370 PF00950 ABC 3 transport family SP5448_RS07375 PF00005 ABC transporter SP5448_RS07380 PF01297 Zinc-uptake complex component A periplasmic SP5448_RS07395 PF01048 Phosphorylase superfamily SP5448_RS07405 PF00293 NUDIX domain SP5448_RS07410 PF00132 Bacterial transferase hexapeptide (six repeats) SP5448_RS07410 PF12804 MobA-like NTP transferase domain SP5448_RS07415 PF07690 Major Facilitator Superfamily SP5448_RS07420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SP5448_RS07420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SP5448_RS07440 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SP5448_RS07440 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SP5448_RS07465 PF03496 ADP-ribosyltransferase exoenzyme SP5448_RS07470 PF02867 Ribonucleotide reductase, barrel domain SP5448_RS07470 PF00317 Ribonucleotide reductase, all-alpha domain SP5448_RS07470 PF08343 Ribonucleotide reductase N-terminal SP5448_RS07475 PF07972 NrdI Flavodoxin like SP5448_RS07480 PF00268 Ribonucleotide reductase, small chain SP5448_RS07485 PF01588 Putative tRNA binding domain SP5448_RS07485 PF09334 tRNA synthetases class I (M) SP5448_RS07500 PF06280 Fn3-like domain SP5448_RS07500 PF00746 LPXTG cell wall anchor motif SP5448_RS07500 PF02225 PA domain SP5448_RS07500 PF00082 Subtilase family SP5448_RS07505 PF01070 FMN-dependent dehydrogenase SP5448_RS07515 PF03372 Endonuclease/Exonuclease/phosphatase family SP5448_RS07520 PF03960 ArsC family SP5448_RS07525 PF03932 CutC family SP5448_RS07535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SP5448_RS07540 PF06156 Initiation control protein YabA SP5448_RS07550 PF09115 DNA polymerase III, delta subunit, C terminal SP5448_RS07555 PF02223 Thymidylate kinase SP5448_RS07560 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SP5448_RS07565 PF00574 Clp protease SP5448_RS07575 PF01943 Polysaccharide biosynthesis protein SP5448_RS07575 PF14667 Polysaccharide biosynthesis C-terminal domain SP5448_RS07580 PF02875 Mur ligase family, glutamate ligase domain SP5448_RS07580 PF08245 Mur ligase middle domain SP5448_RS07585 PF00005 ABC transporter SP5448_RS07590 PF01497 Periplasmic binding protein SP5448_RS07595 PF01032 FecCD transport family SP5448_RS07600 PF01032 FecCD transport family SP5448_RS07610 PF01368 DHH family SP5448_RS07610 PF02833 DHHA2 domain SP5448_RS07615 PF04055 Radical SAM superfamily SP5448_RS07620 PF00571 CBS domain SP5448_RS07620 PF03471 Transporter associated domain SP5448_RS07620 PF01595 Cyclin M transmembrane N-terminal domain SP5448_RS07625 PF06962 Putative rRNA methylase SP5448_RS07630 PF16199 Radical_SAM C-terminal domain SP5448_RS07630 PF04055 Radical SAM superfamily SP5448_RS07635 PF01569 PAP2 superfamily SP5448_RS07640 PF12822 ECF transporter, substrate-specific component SP5448_RS07645 PF00588 SpoU rRNA Methylase family SP5448_RS07650 PF01809 Putative membrane protein insertion efficiency factor SP5448_RS07655 PF00849 RNA pseudouridylate synthase SP5448_RS07655 PF01479 S4 domain SP5448_RS07660 PF04079 Segregation and condensation complex subunit ScpB SP5448_RS07665 PF02616 Segregation and condensation protein ScpA SP5448_RS07670 PF00589 Phage integrase family SP5448_RS07685 PF01725 Ham1 family SP5448_RS07690 PF01177 Asp/Glu/Hydantoin racemase SP5448_RS07695 PF03672 Uncharacterised protein family (UPF0154) SP5448_RS07700 PF01027 Inhibitor of apoptosis-promoting Bax1 SP5448_RS07710 PF08032 RNA 2'-O ribose methyltransferase substrate binding SP5448_RS07710 PF00588 SpoU rRNA Methylase family SP5448_RS07715 PF13808 DDE_Tnp_1-associated SP5448_RS07715 PF01609 Transposase DDE domain SP5448_RS07730 PF00708 Acylphosphatase SP5448_RS07735 PF02096 60Kd inner membrane protein SP5448_RS07740 PF03449 Transcription elongation factor, N-terminal SP5448_RS07740 PF01272 Transcription elongation factor, GreA/GreB, C-term SP5448_RS07745 PF02618 YceG-like family SP5448_RS07755 PF02875 Mur ligase family, glutamate ligase domain SP5448_RS07755 PF08245 Mur ligase middle domain SP5448_RS07755 PF01225 Mur ligase family, catalytic domain SP5448_RS07765 PF00176 SNF2 family N-terminal domain SP5448_RS07765 PF00271 Helicase conserved C-terminal domain SP5448_RS07765 PF12419 SNF2 Helicase protein SP5448_RS07770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SP5448_RS07770 PF01926 50S ribosome-binding GTPase SP5448_RS07775 PF07319 Primosomal protein DnaI N-terminus SP5448_RS07775 PF01695 IstB-like ATP binding protein SP5448_RS07785 PF03477 ATP cone domain SP5448_RS07790 PF18719 ArlS sensor domain SP5448_RS07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS07790 PF00512 His Kinase A (phospho-acceptor) domain SP5448_RS07795 PF00072 Response regulator receiver domain SP5448_RS07795 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS07805 PF01435 Peptidase family M48 SP5448_RS07810 PF04011 LemA family SP5448_RS07815 PF02527 rRNA small subunit methyltransferase G SP5448_RS07820 PF02386 Cation transport protein SP5448_RS07825 PF02254 TrkA-N domain SP5448_RS07825 PF02080 TrkA-C domain SP5448_RS07830 PF00375 Sodium:dicarboxylate symporter family SP5448_RS07835 PF05525 Branched-chain amino acid transport protein SP5448_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS07845 PF00005 ABC transporter SP5448_RS07845 PF09383 NIL domain SP5448_RS07850 PF03180 NLPA lipoprotein SP5448_RS07855 PF00497 Bacterial extracellular solute-binding proteins, family 3 SP5448_RS07860 PF01709 Transcriptional regulator SP5448_RS07865 PF05636 HIGH Nucleotidyl Transferase SP5448_RS07870 PF13649 Methyltransferase domain SP5448_RS07880 PF01966 HD domain SP5448_RS07885 PF01467 Cytidylyltransferase-like SP5448_RS07890 PF01985 CRS1 / YhbY (CRM) domain SP5448_RS07895 PF01926 50S ribosome-binding GTPase SP5448_RS07915 PF13808 DDE_Tnp_1-associated SP5448_RS07915 PF01609 Transposase DDE domain SP5448_RS07955 PF02595 Glycerate kinase family SP5448_RS07960 PF12008 Type I restriction and modification enzyme - subunit R C terminal SP5448_RS07960 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SP5448_RS07960 PF18766 SWI2/SNF2 ATPase SP5448_RS07970 PF12161 HsdM N-terminal domain SP5448_RS07970 PF02384 N-6 DNA Methylase SP5448_RS07980 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS07980 PF00072 Response regulator receiver domain SP5448_RS07990 PF02687 FtsX-like permease family SP5448_RS07995 PF00005 ABC transporter SP5448_RS08000 PF00664 ABC transporter transmembrane region SP5448_RS08000 PF00005 ABC transporter SP5448_RS08010 PF04604 Type-A lantibiotic SP5448_RS08015 PF00232 Glycosyl hydrolase family 1 SP5448_RS08020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS08020 PF02378 Phosphotransferase system, EIIC SP5448_RS08025 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP5448_RS08030 PF01791 DeoC/LacD family aldolase SP5448_RS08035 PF00294 pfkB family carbohydrate kinase SP5448_RS08040 PF02502 Ribose/Galactose Isomerase SP5448_RS08045 PF02502 Ribose/Galactose Isomerase SP5448_RS08050 PF00455 DeoR C terminal sensor domain SP5448_RS08050 PF08220 DeoR-like helix-turn-helix domain SP5448_RS08070 PF00380 Ribosomal protein S9/S16 SP5448_RS08075 PF00572 Ribosomal protein L13 SP5448_RS08080 PF01381 Helix-turn-helix SP5448_RS08090 PF02645 Uncharacterised protein, DegV family COG1307 SP5448_RS08100 PF00588 SpoU rRNA Methylase family SP5448_RS08100 PF08032 RNA 2'-O ribose methyltransferase substrate binding SP5448_RS08110 PF00636 Ribonuclease III domain SP5448_RS08115 PF09190 DALR domain SP5448_RS08115 PF01406 tRNA synthetases class I (C) catalytic domain SP5448_RS08125 PF06426 Serine acetyltransferase, N-terminal SP5448_RS08125 PF00132 Bacterial transferase hexapeptide (six repeats) SP5448_RS08135 PF00575 S1 RNA binding domain SP5448_RS08135 PF03725 3' exoribonuclease family, domain 2 SP5448_RS08135 PF01138 3' exoribonuclease family, domain 1 SP5448_RS08135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SP5448_RS08135 PF00013 KH domain SP5448_RS08140 PF00923 Transaldolase/Fructose-6-phosphate aldolase SP5448_RS08145 PF03611 PTS system sugar-specific permease component SP5448_RS08150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS08155 PF08279 HTH domain SP5448_RS08155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SP5448_RS08155 PF05043 Mga helix-turn-helix domain SP5448_RS08155 PF00874 PRD domain SP5448_RS08155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS08160 PF00312 Ribosomal protein S15 SP5448_RS08170 PF01327 Polypeptide deformylase SP5448_RS08175 PF03358 NADPH-dependent FMN reductase SP5448_RS08180 PF01047 MarR family SP5448_RS08185 PF07733 Bacterial DNA polymerase III alpha NTPase domain SP5448_RS08185 PF00929 Exonuclease SP5448_RS08185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SP5448_RS08185 PF14480 DNA polymerase III polC-type N-terminus I SP5448_RS08185 PF11490 DNA polymerase III polC-type N-terminus II SP5448_RS08185 PF14579 Helix-hairpin-helix motif SP5448_RS08185 PF02811 PHP domain SP5448_RS08190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SP5448_RS08190 PF03129 Anticodon binding domain SP5448_RS08190 PF04073 Aminoacyl-tRNA editing domain SP5448_RS08195 PF02163 Peptidase family M50 SP5448_RS08195 PF13180 PDZ domain SP5448_RS08205 PF01255 Putative undecaprenyl diphosphate synthase SP5448_RS08210 PF02699 Preprotein translocase subunit SP5448_RS08220 PF00128 Alpha amylase, catalytic domain SP5448_RS08220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SP5448_RS08220 PF17999 Pullulanase N1-terminal domain SP5448_RS08225 PF00128 Alpha amylase, catalytic domain SP5448_RS08230 PF17912 MalK OB fold domain SP5448_RS08230 PF03459 TOBE domain SP5448_RS08230 PF00005 ABC transporter SP5448_RS08235 PF13556 PucR C-terminal helix-turn-helix domain SP5448_RS08240 PF02821 Staphylokinase/Streptokinase family SP5448_RS08245 PF02580 D-Tyr-tRNA(Tyr) deacylase SP5448_RS08250 PF13291 ACT domain SP5448_RS08250 PF02824 TGS domain SP5448_RS08250 PF04607 Region found in RelA / SpoT proteins SP5448_RS08255 PF02370 M protein repeat SP5448_RS08255 PF00746 LPXTG cell wall anchor motif SP5448_RS08260 PF07972 NrdI Flavodoxin like SP5448_RS08265 PF03372 Endonuclease/Exonuclease/phosphatase family SP5448_RS08270 PF00367 phosphotransferase system, EIIB SP5448_RS08270 PF02378 Phosphotransferase system, EIIC SP5448_RS08270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SP5448_RS08275 PF04452 RNA methyltransferase SP5448_RS08290 PF00425 chorismate binding enzyme SP5448_RS08290 PF04715 Anthranilate synthase component I, N terminal region SP5448_RS08295 PF00117 Glutamine amidotransferase class-I SP5448_RS08300 PF16193 AAA C-terminal domain SP5448_RS08300 PF05496 Holliday junction DNA helicase RuvB P-loop domain SP5448_RS08300 PF12002 MgsA AAA+ ATPase C terminal SP5448_RS08320 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SP5448_RS08320 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SP5448_RS08330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SP5448_RS08335 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS08340 PF00528 Binding-protein-dependent transport system inner membrane component SP5448_RS08345 PF00005 ABC transporter SP5448_RS08345 PF12558 ATP-binding cassette cobalt transporter SP5448_RS08350 PF00005 ABC transporter SP5448_RS08355 PF05532 CsbD-like SP5448_RS08365 PF01297 Zinc-uptake complex component A periplasmic SP5448_RS08380 PF01609 Transposase DDE domain SP5448_RS08380 PF13808 DDE_Tnp_1-associated SP5448_RS08390 PF00082 Subtilase family SP5448_RS08390 PF02225 PA domain SP5448_RS08390 PF06280 Fn3-like domain SP5448_RS08405 PF04650 YSIRK type signal peptide SP5448_RS08405 PF00746 LPXTG cell wall anchor motif SP5448_RS08410 PF08270 M protein trans-acting positive regulator (MGA) PRD domain SP5448_RS08410 PF05043 Mga helix-turn-helix domain SP5448_RS08410 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SP5448_RS08420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SP5448_RS08420 PF05257 CHAP domain SP5448_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SP5448_RS08425 PF00512 His Kinase A (phospho-acceptor) domain SP5448_RS08425 PF02702 Osmosensitive K+ channel His kinase sensor domain SP5448_RS08425 PF13493 Domain of unknown function (DUF4118) SP5448_RS08430 PF00072 Response regulator receiver domain SP5448_RS08430 PF00486 Transcriptional regulatory protein, C terminal SP5448_RS08435 PF02687 FtsX-like permease family SP5448_RS08435 PF12704 MacB-like periplasmic core domain SP5448_RS08440 PF00005 ABC transporter SP5448_RS08465 PF13145 PPIC-type PPIASE domain SP5448_RS08475 PF13734 Spi protease inhibitor SP5448_RS08475 PF01640 Peptidase C10 family SP5448_RS08490 PF04608 Phosphatidylglycerophosphatase A SP5448_RS08495 PF00465 Iron-containing alcohol dehydrogenase SP5448_RS08500 PF00923 Transaldolase/Fructose-6-phosphate aldolase SP5448_RS08505 PF01228 Glycine radical SP5448_RS08505 PF02901 Pyruvate formate lyase-like SP5448_RS08510 PF02378 Phosphotransferase system, EIIC SP5448_RS08515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SP5448_RS08520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SP5448_RS08525 PF04198 Putative sugar-binding domain SP5448_RS08530 PF00455 DeoR C terminal sensor domain SP5448_RS08530 PF08220 DeoR-like helix-turn-helix domain SP5448_RS08535 PF04055 Radical SAM superfamily SP5448_RS08550 PF00912 Transglycosylase SP5448_RS08550 PF00905 Penicillin binding protein transpeptidase domain SP5448_RS08565 PF00849 RNA pseudouridylate synthase SP5448_RS08565 PF01479 S4 domain SP5448_RS08575 PF03577 Peptidase family C69 SP5448_RS08585 PF00118 TCP-1/cpn60 chaperonin family SP5448_RS08590 PF00166 Chaperonin 10 Kd subunit SP5448_RS08595 PF07724 AAA domain (Cdc48 subfamily) SP5448_RS08595 PF02861 Clp amino terminal domain, pathogenicity island component SP5448_RS08595 PF10431 C-terminal, D2-small domain, of ClpB protein SP5448_RS08595 PF17871 AAA lid domain SP5448_RS08595 PF00004 ATPase family associated with various cellular activities (AAA) SP5448_RS08600 PF17727 CtsR C-terminal dimerization domain SP5448_RS08600 PF05848 CtsR N-terminal HTH domain SP5448_RS08605 PF00313 'Cold-shock' DNA-binding domain SP5448_RS08615 PF00578 AhpC/TSA family SP5448_RS08620 PF07992 Pyridine nucleotide-disulphide oxidoreductase SP5448_RS08620 PF13192 Thioredoxin domain SP5448_RS08625 PF01979 Amidohydrolase family SP5448_RS08630 PF17392 Urocanase C-terminal domain SP5448_RS08630 PF17391 Urocanase N-terminal domain SP5448_RS08630 PF01175 Urocanase Rossmann-like domain SP5448_RS08635 PF02971 Formiminotransferase domain SP5448_RS08635 PF07837 Formiminotransferase domain, N-terminal subdomain SP5448_RS08640 PF04961 Formiminotransferase-cyclodeaminase SP5448_RS08645 PF01268 Formate--tetrahydrofolate ligase SP5448_RS08655 PF13520 Amino acid permease SP5448_RS08660 PF00221 Aromatic amino acid lyase SP5448_RS08665 PF00491 Arginase family SP5448_RS08675 PF00318 Ribosomal protein S2 SP5448_RS08680 PF00889 Elongation factor TS SP5448_RS08685 PF05649 Peptidase family M13 SP5448_RS08685 PF01431 Peptidase family M13 SP5448_RS08690 PF16657 Maltogenic Amylase, C-terminal domain SP5448_RS08690 PF00128 Alpha amylase, catalytic domain SP5448_RS08695 PF02378 Phosphotransferase system, EIIC SP5448_RS08695 PF00367 phosphotransferase system, EIIB SP5448_RS08700 PF07702 UTRA domain SP5448_RS08700 PF00392 Bacterial regulatory proteins, gntR family SP5448_RS08710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SP5448_RS08715 PF03883 Peroxide stress protein YaaA SP5448_RS08730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SP5448_RS08735 PF13597 Anaerobic ribonucleoside-triphosphate reductase SP5448_RS08735 PF03477 ATP cone domain SP5448_RS08745 PF06949 Protein of unknown function (DUF1292) SP5448_RS08750 PF03652 Holliday junction resolvase SP5448_RS08755 PF06135 IreB regulatory phosphoprotein SP5448_RS08760 PF03960 ArsC family SP5448_RS08765 PF00154 recA bacterial DNA recombination protein SP5448_RS08770 PF00994 Probable molybdopterin binding domain SP5448_RS08770 PF02464 Competence-damaged protein SP5448_RS08770 PF18146 Damage-inducible protein CinA KH domain SP5448_RS08775 PF00958 GMP synthase C terminal domain SP5448_RS08775 PF13673 Acetyltransferase (GNAT) domain SP5448_RS08775 PF13302 Acetyltransferase (GNAT) domain SP5448_RS08775 PF00117 Glutamine amidotransferase class-I SP5448_RS08775 PF03352 Methyladenine glycosylase SP5448_RS08780 PF07499 RuvA, C-terminal domain SP5448_RS08780 PF01330 RuvA N terminal domain SP5448_RS08785 PF07690 Major Facilitator Superfamily SP5448_RS08790 PF01119 DNA mismatch repair protein, C-terminal domain SP5448_RS08790 PF08676 MutL C terminal dimerisation domain SP5448_RS08795 PF00488 MutS domain V SP5448_RS08795 PF05190 MutS family domain IV SP5448_RS08795 PF05192 MutS domain III SP5448_RS08795 PF05188 MutS domain II SP5448_RS08795 PF01624 MutS domain I SP5448_RS08805 PF01316 Arginine repressor, DNA binding domain SP5448_RS08805 PF02863 Arginine repressor, C-terminal domain SP5448_RS08810 PF03485 Arginyl tRNA synthetase N terminal domain SP5448_RS08810 PF00750 tRNA synthetases class I (R) SP5448_RS08810 PF05746 DALR anticodon binding domain SP5448_RS08820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SP5448_RS08820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SP5448_RS08825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SP5448_RS08825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SP5448_RS08830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SP5448_RS08830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SP5448_RS08835 PF02938 GAD domain SP5448_RS08835 PF00152 tRNA synthetases class II (D, K and N) SP5448_RS08835 PF01336 OB-fold nucleic acid binding domain SP5448_RS08840 PF03129 Anticodon binding domain SP5448_RS08840 PF13393 Histidyl-tRNA synthetase SP5448_RS08845 PF01783 Ribosomal L32p protein family SP5448_RS08850 PF00471 Ribosomal protein L33 SP5448_RS08860 PF01022 Bacterial regulatory protein, arsR family SP5448_RS08890 PF00293 NUDIX domain SP5448_RS08895 PF03551 Transcriptional regulator PadR-like family SP5448_RS08920 PF00163 Ribosomal protein S4/S9 N-terminal domain SP5448_RS08920 PF01479 S4 domain SP5448_RS08930 PF13808 DDE_Tnp_1-associated SP5448_RS08930 PF01609 Transposase DDE domain SP5448_RS08940 PF00772 DnaB-like helicase N terminal domain SP5448_RS08940 PF03796 DnaB-like helicase C terminal domain SP5448_RS08945 PF03948 Ribosomal protein L9, C-terminal domain SP5448_RS08945 PF01281 Ribosomal protein L9, N-terminal domain SP5448_RS08950 PF02272 DHHA1 domain SP5448_RS08950 PF01368 DHH family SP5448_RS08955 PF13932 GidA associated domain SP5448_RS08955 PF01134 Glucose inhibited division protein A SP5448_RS08970 PF01842 ACT domain SP5448_RS08970 PF03315 Serine dehydratase beta chain SP5448_RS08975 PF03313 Serine dehydratase alpha chain SP5448_RS08980 PF06737 Transglycosylase-like domain SP5448_RS08985 PF02361 Cobalt transport protein SP5448_RS08990 PF00005 ABC transporter SP5448_RS08995 PF00005 ABC transporter SP5448_RS09000 PF01066 CDP-alcohol phosphatidyltransferase SP5448_RS09010 PF05193 Peptidase M16 inactive domain SP5448_RS09010 PF00675 Insulinase (Peptidase family M16) SP5448_RS09020 PF00535 Glycosyl transferase family 2 SP5448_RS09025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SP5448_RS09025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SP5448_RS09025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SP5448_RS09030 PF00483 Nucleotidyl transferase SP5448_RS09040 PF02463 RecF/RecN/SMC N terminal domain SP5448_RS09045 PF06800 Sugar transport protein SP5448_RS09050 PF00478 IMP dehydrogenase / GMP reductase domain SP5448_RS09050 PF00571 CBS domain SP5448_RS09055 PF00579 tRNA synthetases class I (W and Y) SP5448_RS09060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SP5448_RS09060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SP5448_RS09065 PF12848 ABC transporter SP5448_RS09065 PF00005 ABC transporter SP5448_RS09085 PF13936 Helix-turn-helix domain SP5448_RS09090 PF13936 Helix-turn-helix domain SP5448_RS09100 PF02590 Predicted SPOUT methyltransferase SP5448_RS09105 PF13180 PDZ domain SP5448_RS09110 PF17762 HTH domain found in ParB protein SP5448_RS09110 PF02195 ParB-like nuclease domain