AUQ45_RS00005 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AUQ45_RS00010 SM00480 DNA polymerase III beta subunit AUQ45_RS00030 SM00487 DEAD-like helicases superfamily AUQ45_RS00030 SM00490 helicase superfamily c-terminal domain AUQ45_RS00030 SM00982 AUQ45_RS00030 AUQ45_RS00030 SM01058 CarD-like/TRCF domain AUQ45_RS00035 SM00363 S4 RNA-binding domain AUQ45_RS00060 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS00245 SM01400 AUQ45_RS00245 AUQ45_RS00270 SM01211 AUQ45_RS00270 AUQ45_RS00290 SM00798 AICARFT/IMPCHase bienzyme AUQ45_RS00290 SM00851 MGS-like domain AUQ45_RS00300 SM01209 AUQ45_RS00300 AUQ45_RS00300 SM01210 AUQ45_RS00300 AUQ45_RS00305 SM01001 AIR carboxylase AUQ45_RS00320 SM00998 Adenylosuccinate lyase C-terminus AUQ45_RS00325 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS00330 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS00335 SM00226 Low molecular weight phosphatase family AUQ45_RS00340 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. AUQ45_RS00355 SM00829 Enoylreductase AUQ45_RS00365 SM01403 AUQ45_RS00365 AUQ45_RS00385 SM01382 AUQ45_RS00385 AUQ45_RS00385 SM01383 AUQ45_RS00385 AUQ45_RS00400 SM00322 K homology RNA-binding domain AUQ45_RS00420 SM01374 AUQ45_RS00420 AUQ45_RS00425 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AUQ45_RS00480 SM00316 Ribosomal protein S1-like RNA-binding domain AUQ45_RS00495 SM00662 RNA polymerases D AUQ45_RS00600 SM00347 helix_turn_helix multiple antibiotic resistance protein AUQ45_RS00605 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS00620 SM00363 S4 RNA-binding domain AUQ45_RS00635 SM00663 RNA polymerase I subunit A N-terminus AUQ45_RS00770 SM00342 helix_turn_helix, arabinose operon control protein AUQ45_RS00800 SM00882 Coenzyme A transferase AUQ45_RS00805 SM00882 Coenzyme A transferase AUQ45_RS00880 SM00788 Adenylosuccinate synthetase AUQ45_RS00890 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AUQ45_RS00890 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AUQ45_RS00940 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AUQ45_RS00950 SM01007 Class II Aldolase and Adducin N-terminal domain AUQ45_RS00965 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS00975 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AUQ45_RS00975 SM00474 3'-5' exonuclease AUQ45_RS00975 SM00475 5'-3' exonuclease AUQ45_RS00975 SM00482 DNA polymerase A domain AUQ45_RS00980 SM00881 CoA binding domain AUQ45_RS01000 SM00470 ParB-like nuclease domain AUQ45_RS01060 SM00849 Metallo-beta-lactamase superfamily AUQ45_RS01070 SM00460 Transglutaminase/protease-like homologues AUQ45_RS01110 SM00347 helix_turn_helix multiple antibiotic resistance protein AUQ45_RS01115 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01120 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01135 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01140 SM00947 Carbonic anhydrase AUQ45_RS01165 SM00448 cheY-homologous receiver domain AUQ45_RS01165 SM00850 LytTr DNA-binding domain AUQ45_RS01180 SM00393 Putative single-stranded nucleic acids-binding domain AUQ45_RS01180 SM01245 AUQ45_RS01180 AUQ45_RS01215 SM01130 AUQ45_RS01215 AUQ45_RS01240 SM00650 Ribosomal RNA adenine dimethylases AUQ45_RS01255 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AUQ45_RS01290 SM00838 Elongation factor G C-terminus AUQ45_RS01290 SM00889 Elongation factor G, domain IV AUQ45_RS01295 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AUQ45_RS01300 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01305 SM00062 Bacterial periplasmic substrate-binding proteins AUQ45_RS01330 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01360 SM00936 Penicillin-binding protein 5, C-terminal domain AUQ45_RS01380 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01385 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01450 SM01103 AUQ45_RS01450 AUQ45_RS01460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AUQ45_RS01485 SM00062 Bacterial periplasmic substrate-binding proteins AUQ45_RS01495 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01495 SM00930 AUQ45_RS01495 AUQ45_RS01545 SM00448 cheY-homologous receiver domain AUQ45_RS01545 SM00862 Transcriptional regulatory protein, C terminal AUQ45_RS01575 SM00487 DEAD-like helicases superfamily AUQ45_RS01575 SM00490 helicase superfamily c-terminal domain AUQ45_RS01615 SM00967 RNA 2'-O ribose methyltransferase substrate binding AUQ45_RS01650 SM00116 Domain in cystathionine beta-synthase and other proteins. AUQ45_RS01670 SM00363 S4 RNA-binding domain AUQ45_RS01675 SM01234 AUQ45_RS01675 AUQ45_RS01690 SM00014 Acid phosphatase homologues AUQ45_RS01695 SM00729 Elongator protein 3, MiaB family, Radical SAM AUQ45_RS01705 SM01091 Transporter associated domain AUQ45_RS01715 SM01131 AUQ45_RS01715 AUQ45_RS01740 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01935 SM00529 Helix-turn-helix diphteria tox regulatory element AUQ45_RS01935 SM00899 AUQ45_RS01935 AUQ45_RS01945 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01960 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS01960 SM00843 AUQ45_RS01960 AUQ45_RS01970 SM00649 Ribosomal protein L11/L12 AUQ45_RS02005 SM00257 Lysin motif AUQ45_RS02020 SM00986 Uracil DNA glycosylase superfamily AUQ45_RS02020 SM00987 UreE urease accessory protein, C-terminal domain AUQ45_RS02100 SM00448 cheY-homologous receiver domain AUQ45_RS02100 SM00850 LytTr DNA-binding domain AUQ45_RS02115 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS02165 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS02170 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AUQ45_RS02170 SM01232 AUQ45_RS02170 AUQ45_RS02195 SM00316 Ribosomal protein S1-like RNA-binding domain AUQ45_RS02195 SM00955 AUQ45_RS02195 AUQ45_RS02245 SM00354 helix_turn _helix lactose operon repressor AUQ45_RS02260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AUQ45_RS02265 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS02300 SM00448 cheY-homologous receiver domain AUQ45_RS02300 SM00862 Transcriptional regulatory protein, C terminal AUQ45_RS02305 SM00091 PAS domain AUQ45_RS02305 SM00387 Histidine kinase-like ATPases AUQ45_RS02305 SM00388 His Kinase A (phosphoacceptor) domain AUQ45_RS02310 SM00849 Metallo-beta-lactamase superfamily AUQ45_RS02315 SM00358 Double-stranded RNA binding motif AUQ45_RS02315 SM00535 Ribonuclease III family AUQ45_RS02320 SM00968 SMC proteins Flexible Hinge Domain AUQ45_RS02370 SM00984 UDP binding domain AUQ45_RS02450 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS02450 SM00962 SRP54-type protein, GTPase domain AUQ45_RS02450 SM00963 SRP54-type protein, helical bundle domain AUQ45_RS02460 SM01061 CAT RNA binding domain AUQ45_RS02485 SM00316 Ribosomal protein S1-like RNA-binding domain AUQ45_RS02485 SM00732 Likely ribonuclease with RNase H fold. AUQ45_RS02490 SM00731 SprT homologues. AUQ45_RS02550 SM00855 Phosphoglycerate mutase family AUQ45_RS02630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AUQ45_RS02640 SM00831 Cation transporter/ATPase, N-terminus AUQ45_RS02645 SM00354 helix_turn _helix lactose operon repressor AUQ45_RS02710 SM00937 AUQ45_RS02710 AUQ45_RS02715 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS02725 SM00849 Metallo-beta-lactamase superfamily AUQ45_RS02745 SM00479 AUQ45_RS02745 AUQ45_RS02745 SM00487 DEAD-like helicases superfamily AUQ45_RS02745 SM00491 AUQ45_RS02745 AUQ45_RS02785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS02785 SM00866 AUQ45_RS02785 AUQ45_RS02810 SM00830 Chorismate mutase type II AUQ45_RS02835 SM00387 Histidine kinase-like ATPases AUQ45_RS02835 SM00433 TopoisomeraseII AUQ45_RS02850 SM01192 AUQ45_RS02850 AUQ45_RS02850 SM01193 AUQ45_RS02850 AUQ45_RS02885 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS02910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AUQ45_RS02910 SM00292 breast cancer carboxy-terminal domain AUQ45_RS02910 SM00532 Ligase N family AUQ45_RS02915 SM00046 Diacylglycerol kinase catalytic domain (presumed) AUQ45_RS02950 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS02985 SM00873 B3/4 domain AUQ45_RS02985 SM00874 tRNA synthetase B5 domain AUQ45_RS02985 SM00896 Ferredoxin-fold anticodon binding domain AUQ45_RS03005 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS03025 SM00062 Bacterial periplasmic substrate-binding proteins AUQ45_RS03025 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AUQ45_RS03040 SM00400 zinc finger AUQ45_RS03040 SM00493 AUQ45_RS03040 AUQ45_RS03075 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS03100 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS03120 SM00047 Lysozyme subfamily 2 AUQ45_RS03230 SM00507 HNH nucleases AUQ45_RS03260 SM00244 prohibitin homologues AUQ45_RS03265 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS03340 SM01040 BRO family, N-terminal domain AUQ45_RS03350 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS03360 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS03485 SM00981 AUQ45_RS03485 AUQ45_RS03490 SM00854 Bacterial capsule synthesis protein PGA_cap AUQ45_RS03520 SM00363 S4 RNA-binding domain AUQ45_RS03540 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AUQ45_RS03545 SM00851 MGS-like domain AUQ45_RS03545 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AUQ45_RS03545 SM01209 AUQ45_RS03545 AUQ45_RS03555 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS03625 SM00420 helix_turn_helix, Deoxyribose operon repressor AUQ45_RS03625 SM01134 AUQ45_RS03625 AUQ45_RS03640 SM00047 Lysozyme subfamily 2 AUQ45_RS03645 SM00047 Lysozyme subfamily 2 AUQ45_RS03680 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS03700 SM00954 Region found in RelA / SpoT proteins AUQ45_RS03705 SM00448 cheY-homologous receiver domain AUQ45_RS03705 SM00862 Transcriptional regulatory protein, C terminal AUQ45_RS03710 SM00387 Histidine kinase-like ATPases AUQ45_RS03710 SM00388 His Kinase A (phosphoacceptor) domain AUQ45_RS03755 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS03755 SM00994 ClpX C4-type zinc finger AUQ45_RS03755 SM01086 C-terminal, D2-small domain, of ClpB protein AUQ45_RS03770 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS03770 SM01086 C-terminal, D2-small domain, of ClpB protein AUQ45_RS03815 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AUQ45_RS03830 SM00062 Bacterial periplasmic substrate-binding proteins AUQ45_RS03840 SM00986 Uracil DNA glycosylase superfamily AUQ45_RS03840 SM00987 UreE urease accessory protein, C-terminal domain AUQ45_RS03850 SM01207 AUQ45_RS03850 AUQ45_RS03855 SM00387 Histidine kinase-like ATPases AUQ45_RS03855 SM00433 TopoisomeraseII AUQ45_RS03860 SM00434 DNA Topoisomerase IV AUQ45_RS03885 SM00316 Ribosomal protein S1-like RNA-binding domain AUQ45_RS03900 SM00450 Rhodanese Homology Domain AUQ45_RS03955 SM00478 endonuclease III AUQ45_RS03955 SM00525 AUQ45_RS03955 AUQ45_RS04000 SM00028 Tetratricopeptide repeats AUQ45_RS04025 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04030 SM00849 Metallo-beta-lactamase superfamily AUQ45_RS04045 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04055 SM00861 Transketolase, pyrimidine binding domain AUQ45_RS04115 SM00729 Elongator protein 3, MiaB family, Radical SAM AUQ45_RS04165 SM00838 Elongation factor G C-terminus AUQ45_RS04210 SM00342 helix_turn_helix, arabinose operon control protein AUQ45_RS04210 SM00448 cheY-homologous receiver domain AUQ45_RS04225 SM00465 GIY-YIG type nucleases (URI domain) AUQ45_RS04255 SM00936 Penicillin-binding protein 5, C-terminal domain AUQ45_RS04280 SM00905 Dihydroneopterin aldolase AUQ45_RS04295 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04315 SM00448 cheY-homologous receiver domain AUQ45_RS04330 SM00919 Malic enzyme, NAD binding domain AUQ45_RS04330 SM01274 AUQ45_RS04330 AUQ45_RS04335 SM00829 Enoylreductase AUQ45_RS04380 SM00881 CoA binding domain AUQ45_RS04395 SM01400 AUQ45_RS04395 AUQ45_RS04400 SM01118 AUQ45_RS04400 AUQ45_RS04405 SM00954 Region found in RelA / SpoT proteins AUQ45_RS04435 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04445 SM01240 AUQ45_RS04445 AUQ45_RS04475 SM00937 AUQ45_RS04475 AUQ45_RS04510 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04515 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04530 SM00434 DNA Topoisomerase IV AUQ45_RS04550 SM00046 Diacylglycerol kinase catalytic domain (presumed) AUQ45_RS04580 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AUQ45_RS04580 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AUQ45_RS04580 SM00493 AUQ45_RS04580 AUQ45_RS04620 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS04620 SM00895 AUQ45_RS04620 AUQ45_RS04670 SM00764 Citrate lyase ligase C-terminal domain AUQ45_RS04685 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS04690 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04690 SM00962 SRP54-type protein, GTPase domain AUQ45_RS04690 SM00963 SRP54-type protein, helical bundle domain AUQ45_RS04700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS04700 SM00866 AUQ45_RS04700 AUQ45_RS04720 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04735 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS04745 SM00155 Phospholipase D. Active site motifs. AUQ45_RS04765 SM00506 Appr-1"-p processing enzyme AUQ45_RS04820 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04850 SM00387 Histidine kinase-like ATPases AUQ45_RS04850 SM00388 His Kinase A (phosphoacceptor) domain AUQ45_RS04855 SM00448 cheY-homologous receiver domain AUQ45_RS04855 SM00862 Transcriptional regulatory protein, C terminal AUQ45_RS04870 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04875 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04915 SM00904 Riboflavin kinase AUQ45_RS04945 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS04955 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS05010 SM00062 Bacterial periplasmic substrate-binding proteins AUQ45_RS05015 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS05050 SM00481 DNA polymerase alpha chain like domain AUQ45_RS05055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS05060 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS05100 SM00287 Bacterial SH3 domain homologues AUQ45_RS05110 SM00047 Lysozyme subfamily 2 AUQ45_RS05215 SM00507 HNH nucleases AUQ45_RS05275 SM00942 Primase C terminal 1 (PriCT-1) AUQ45_RS05275 SM00943 Bifunctional DNA primase/polymerase, N-terminal AUQ45_RS05290 SM00487 DEAD-like helicases superfamily AUQ45_RS05320 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS05340 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS05350 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS05380 SM00354 helix_turn _helix lactose operon repressor AUQ45_RS05440 SM00487 DEAD-like helicases superfamily AUQ45_RS05440 SM00490 helicase superfamily c-terminal domain AUQ45_RS05445 SM00062 Bacterial periplasmic substrate-binding proteins AUQ45_RS05445 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AUQ45_RS05450 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS05530 SM00363 S4 RNA-binding domain AUQ45_RS05590 SM00116 Domain in cystathionine beta-synthase and other proteins. AUQ45_RS05615 SM00364 Leucine-rich repeats, bacterial type AUQ45_RS05615 SM00365 Leucine-rich repeat, SDS22-like subfamily AUQ45_RS05625 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS05650 SM00487 DEAD-like helicases superfamily AUQ45_RS05650 SM00490 helicase superfamily c-terminal domain AUQ45_RS05715 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS05720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AUQ45_RS05750 SM00363 S4 RNA-binding domain AUQ45_RS05795 SM00849 Metallo-beta-lactamase superfamily AUQ45_RS05800 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AUQ45_RS05805 SM00563 Phosphate acyltransferases AUQ45_RS05825 SM00487 DEAD-like helicases superfamily AUQ45_RS05825 SM00490 helicase superfamily c-terminal domain AUQ45_RS05850 SM00493 AUQ45_RS05850 AUQ45_RS05875 SM00855 Phosphoglycerate mutase family AUQ45_RS05895 SM00892 DNA/RNA non-specific endonuclease AUQ45_RS05905 SM00047 Lysozyme subfamily 2 AUQ45_RS05905 SM01095 Cpl-7 lysozyme C-terminal domain AUQ45_RS06055 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS06060 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS06065 SM00910 AUQ45_RS06065 AUQ45_RS06075 SM00411 bacterial (prokaryotic) histone like domain AUQ45_RS06110 SM00363 S4 RNA-binding domain AUQ45_RS06145 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS06160 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS06160 SM01086 C-terminal, D2-small domain, of ClpB protein AUQ45_RS06185 SM00363 S4 RNA-binding domain AUQ45_RS06205 SM00864 Tubulin/FtsZ family, GTPase domain AUQ45_RS06205 SM00865 Tubulin/FtsZ family, C-terminal domain AUQ45_RS06210 SM00842 Cell division protein FtsA AUQ45_RS06235 SM00838 Elongation factor G C-terminus AUQ45_RS06240 SM00450 Rhodanese Homology Domain AUQ45_RS06275 SM00354 helix_turn _helix lactose operon repressor AUQ45_RS06330 SM00419 helix_turn_helix, cAMP Regulatory protein AUQ45_RS06340 SM00873 B3/4 domain AUQ45_RS06350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AUQ45_RS06350 SM00387 Histidine kinase-like ATPases AUQ45_RS06355 SM00342 helix_turn_helix, arabinose operon control protein AUQ45_RS06355 SM00448 cheY-homologous receiver domain AUQ45_RS06450 SM00342 helix_turn_helix, arabinose operon control protein AUQ45_RS06450 SM00448 cheY-homologous receiver domain AUQ45_RS06455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AUQ45_RS06495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS06500 SM01149 AUQ45_RS06500 AUQ45_RS06505 SM00872 Alpha mannosidase, middle domain AUQ45_RS06525 SM00892 DNA/RNA non-specific endonuclease AUQ45_RS06545 SM00047 Lysozyme subfamily 2 AUQ45_RS06755 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS06785 SM00974 AUQ45_RS06785 AUQ45_RS06870 SM00487 DEAD-like helicases superfamily AUQ45_RS06870 SM00490 helicase superfamily c-terminal domain AUQ45_RS06885 SM00316 Ribosomal protein S1-like RNA-binding domain AUQ45_RS06895 SM00421 helix_turn_helix, Lux Regulon AUQ45_RS06895 SM00448 cheY-homologous receiver domain AUQ45_RS06900 SM00387 Histidine kinase-like ATPases AUQ45_RS06910 SM00220 Serine/Threonine protein kinases, catalytic domain AUQ45_RS06910 SM00740 AUQ45_RS06910 AUQ45_RS06915 SM00331 Sigma factor PP2C-like phosphatases AUQ45_RS06915 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AUQ45_RS06930 SM00487 DEAD-like helicases superfamily AUQ45_RS06930 SM00490 helicase superfamily c-terminal domain AUQ45_RS06935 SM01409 AUQ45_RS06935 AUQ45_RS06940 SM00072 Guanylate kinase homologues. AUQ45_RS06945 SM00322 K homology RNA-binding domain AUQ45_RS06945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AUQ45_RS06960 SM00882 Coenzyme A transferase AUQ45_RS06965 SM00882 Coenzyme A transferase AUQ45_RS06990 SM00981 AUQ45_RS06990 AUQ45_RS07050 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07060 SM00487 DEAD-like helicases superfamily AUQ45_RS07060 SM00490 helicase superfamily c-terminal domain AUQ45_RS07070 SM00740 AUQ45_RS07070 AUQ45_RS07110 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07120 SM00861 Transketolase, pyrimidine binding domain AUQ45_RS07220 SM01133 AUQ45_RS07220 AUQ45_RS07255 SM00420 helix_turn_helix, Deoxyribose operon repressor AUQ45_RS07255 SM01134 AUQ45_RS07255 AUQ45_RS07300 SM00322 K homology RNA-binding domain AUQ45_RS07340 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07425 SM00878 Biotin carboxylase C-terminal domain AUQ45_RS07440 SM00825 Beta-ketoacyl synthase AUQ45_RS07445 SM00822 AUQ45_RS07445 AUQ45_RS07450 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AUQ45_RS07470 SM00347 helix_turn_helix multiple antibiotic resistance protein AUQ45_RS07480 SM00271 DnaJ molecular chaperone homology domain AUQ45_RS07500 SM00047 Lysozyme subfamily 2 AUQ45_RS07510 SM00855 Phosphoglycerate mutase family AUQ45_RS07525 SM00845 GatB domain AUQ45_RS07580 SM00870 AUQ45_RS07580 AUQ45_RS07590 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07595 SM00487 DEAD-like helicases superfamily AUQ45_RS07595 SM00490 helicase superfamily c-terminal domain AUQ45_RS07600 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07615 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07620 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07625 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07645 SM00365 Leucine-rich repeat, SDS22-like subfamily AUQ45_RS07645 SM00369 Leucine-rich repeats, typical (most populated) subfamily AUQ45_RS07645 SM00725 NEAr Transporter domain AUQ45_RS07655 SM01005 Alanine racemase, C-terminal domain AUQ45_RS07665 SM00957 SecA DEAD-like domain AUQ45_RS07665 SM00958 SecA preprotein cross-linking domain AUQ45_RS07700 SM00640 Glycosyl hydrolases family 32 AUQ45_RS07705 SM00354 helix_turn _helix lactose operon repressor AUQ45_RS07720 SM00841 Elongation factor P, C-terminal AUQ45_RS07720 SM01185 AUQ45_RS07720 AUQ45_RS07735 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07770 SM00478 endonuclease III AUQ45_RS07775 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS07785 SM00014 Acid phosphatase homologues AUQ45_RS07790 SM00463 Small MutS-related domain AUQ45_RS07790 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AUQ45_RS07790 SM00534 ATPase domain of DNA mismatch repair MUTS family AUQ45_RS07815 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS07860 SM00419 helix_turn_helix, cAMP Regulatory protein AUQ45_RS07865 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AUQ45_RS07865 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AUQ45_RS07870 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS07875 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS07885 SM00422 helix_turn_helix, mercury resistance AUQ45_RS07890 SM00479 AUQ45_RS07890 AUQ45_RS07905 SM01133 AUQ45_RS07905 AUQ45_RS07920 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS07950 SM00849 Metallo-beta-lactamase superfamily AUQ45_RS07955 SM01230 AUQ45_RS07955 AUQ45_RS07960 SM00422 helix_turn_helix, mercury resistance AUQ45_RS07980 SM00244 prohibitin homologues AUQ45_RS07985 SM01120 AUQ45_RS07985 AUQ45_RS07985 SM01121 AUQ45_RS07985 AUQ45_RS08095 SM00487 DEAD-like helicases superfamily AUQ45_RS08115 SM00421 helix_turn_helix, Lux Regulon AUQ45_RS08115 SM00448 cheY-homologous receiver domain AUQ45_RS08155 SM01133 AUQ45_RS08155 AUQ45_RS08175 SM00420 helix_turn_helix, Deoxyribose operon repressor AUQ45_RS08175 SM01134 AUQ45_RS08175 AUQ45_RS08205 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS08225 SM00967 RNA 2'-O ribose methyltransferase substrate binding AUQ45_RS08240 SM00840 AUQ45_RS08240 AUQ45_RS08260 SM00316 Ribosomal protein S1-like RNA-binding domain AUQ45_RS08260 SM00322 K homology RNA-binding domain AUQ45_RS08285 SM01387 AUQ45_RS08285 AUQ45_RS08310 SM00347 helix_turn_helix multiple antibiotic resistance protein AUQ45_RS08315 SM00479 AUQ45_RS08315 AUQ45_RS08315 SM00481 DNA polymerase alpha chain like domain AUQ45_RS08340 SM01323 AUQ45_RS08340 AUQ45_RS08350 SM00642 Alpha-amylase domain AUQ45_RS08355 SM00642 Alpha-amylase domain AUQ45_RS08360 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AUQ45_RS08380 SM00954 Region found in RelA / SpoT proteins AUQ45_RS08435 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08470 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08475 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AUQ45_RS08535 SM00387 Histidine kinase-like ATPases AUQ45_RS08535 SM00388 His Kinase A (phosphoacceptor) domain AUQ45_RS08540 SM00448 cheY-homologous receiver domain AUQ45_RS08540 SM00862 Transcriptional regulatory protein, C terminal AUQ45_RS08550 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08595 SM00892 DNA/RNA non-specific endonuclease AUQ45_RS08640 SM00420 helix_turn_helix, Deoxyribose operon repressor AUQ45_RS08640 SM01134 AUQ45_RS08640 AUQ45_RS08685 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS08695 SM00883 Chaperonin 10 Kd subunit AUQ45_RS08700 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08700 SM01086 C-terminal, D2-small domain, of ClpB protein AUQ45_RS08710 SM00357 Cold shock protein domain AUQ45_RS08740 SM01221 AUQ45_RS08740 AUQ45_RS08740 SM01222 AUQ45_RS08740 AUQ45_RS08775 SM00028 Tetratricopeptide repeats AUQ45_RS08775 SM01043 Bacterial transcriptional activator domain AUQ45_RS08795 SM00642 Alpha-amylase domain AUQ45_RS08805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AUQ45_RS08805 SM00866 AUQ45_RS08805 AUQ45_RS08855 SM00732 Likely ribonuclease with RNase H fold. AUQ45_RS08870 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS08875 SM00852 Probable molybdopterin binding domain AUQ45_RS08885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AUQ45_RS08895 SM00853 MutL C terminal dimerisation domain AUQ45_RS08895 SM01340 AUQ45_RS08895 AUQ45_RS08905 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS08910 SM00530 Helix-turn-helix XRE-family like proteins AUQ45_RS08915 SM01040 BRO family, N-terminal domain AUQ45_RS08920 SM01040 BRO family, N-terminal domain AUQ45_RS08965 SM00942 Primase C terminal 1 (PriCT-1) AUQ45_RS08970 SM00885 D5 N terminal like AUQ45_RS09000 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AUQ45_RS09000 SM00534 ATPase domain of DNA mismatch repair MUTS family AUQ45_RS09015 SM00836 DALR anticodon binding domain AUQ45_RS09015 SM01016 Arginyl tRNA synthetase N terminal dom AUQ45_RS09065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AUQ45_RS09125 SM00363 S4 RNA-binding domain AUQ45_RS09125 SM01390 AUQ45_RS09125 AUQ45_RS09160 SM01228 AUQ45_RS09160 AUQ45_RS09195 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS09200 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS09230 SM00984 UDP binding domain AUQ45_RS09255 SM00116 Domain in cystathionine beta-synthase and other proteins. AUQ45_RS09255 SM01240 AUQ45_RS09255 AUQ45_RS09270 SM00382 ATPases associated with a variety of cellular activities AUQ45_RS09305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AUQ45_RS09310 SM00470 ParB-like nuclease domain