locus-tag	class	description
IB938_RS00010	COG0592	DNA-directed DNA polymerase activity
IB938_RS00020	COG0012	GTP binding
IB938_RS00030	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IB938_RS00035	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IB938_RS00060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IB938_RS00065	COG0531	amino acid
IB938_RS00245	COG3942	CHAP domain
IB938_RS00265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IB938_RS00275	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IB938_RS00290	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IB938_RS00310	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IB938_RS00330	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IB938_RS00345	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IB938_RS00360	COG1012	belongs to the aldehyde dehydrogenase family
IB938_RS00360	COG1454	alcohol dehydrogenase
IB938_RS00365	COG1064	alcohol dehydrogenase
IB938_RS00370	COG0534	Mate efflux family protein
IB938_RS00480	COG0201	protein transport
IB938_RS00630	COG1121	(ABC) transporter
IB938_RS00635	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IB938_RS00650	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB938_RS00650	COG4499	WXG100 protein secretion system (Wss), protein YukC
IB938_RS00670	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IB938_RS00675	COG1459	type II secretion system
IB938_RS00680	COG4537	Required for transformation and DNA binding
IB938_RS00720	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IB938_RS00725	COG1363	Peptidase, m42
IB938_RS00735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IB938_RS00740	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IB938_RS00750	COG1428	Deoxynucleoside kinase
IB938_RS00755	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IB938_RS00815	COG2031	fatty acid transporter
IB938_RS00830	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IB938_RS00845	COG0251	oxidation-reduction process
IB938_RS00860	COG1269	ATP hydrolysis coupled proton transport
IB938_RS00865	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IB938_RS00875	COG1527	subunit (C
IB938_RS00880	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
IB938_RS00915	COG1744	ABC transporter substrate-binding protein PnrA-like
IB938_RS00960	COG0626	cystathionine gamma-synthase activity
IB938_RS00990	COG3623	hexulose-6-phosphate isomerase
IB938_RS01010	COG3448	diguanylate cyclase activity
IB938_RS01010	COG4175	Glycine betaine
IB938_RS01020	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IB938_RS01020	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IB938_RS01050	COG1268	BioY protein
IB938_RS01055	COG1234	tRNA 3'-trailer cleavage
IB938_RS01100	COG0457	Tetratricopeptide repeat
IB938_RS01100	COG0705	Rhomboid family
IB938_RS01120	COG1132	(ABC) transporter
IB938_RS01125	COG1132	(ABC) transporter
IB938_RS01135	COG0756	dUTP diphosphatase activity
IB938_RS01160	COG3290	protein histidine kinase activity
IB938_RS01185	COG1847	R3H domain protein
IB938_RS01205	COG1175	transmembrane transport
IB938_RS01210	COG0395	ABC-type sugar transport system, permease component
IB938_RS01225	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IB938_RS01240	COG0084	hydrolase, TatD family'
IB938_RS01265	COG1564	THIamine pyrophosphokinase
IB938_RS01280	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IB938_RS01320	COG0765	amino acid transport
IB938_RS01340	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IB938_RS01350	COG0719	Fe-S assembly protein
IB938_RS01355	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IB938_RS01370	COG1686	Belongs to the peptidase S11 family
IB938_RS01375	COG1686	Belongs to the peptidase S11 family
IB938_RS01380	COG4166	transmembrane transport
IB938_RS01385	COG0601	transmembrane transport
IB938_RS01390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IB938_RS01395	COG0444	Belongs to the ABC transporter superfamily
IB938_RS01405	COG2801	Transposase and inactivated derivatives
IB938_RS01445	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
IB938_RS01450	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IB938_RS01455	COG1534	Rna-binding protein
IB938_RS01465	COG1713	HD superfamily hydrolase involved in NAD metabolism
IB938_RS01475	COG0799	negative regulation of ribosome biogenesis
IB938_RS01480	COG2226	methyltransferase
IB938_RS01495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB938_RS01500	COG1464	Belongs to the NlpA lipoprotein family
IB938_RS01515	COG1114	Component of the transport system for branched-chain amino acids
IB938_RS01525	COG0569	domain protein
IB938_RS01530	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IB938_RS01540	COG1704	LemA family
IB938_RS01555	COG0745	RESPONSE REGULATOR receiver
IB938_RS01575	COG1484	DNA-dependent DNA replication
IB938_RS01585	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IB938_RS01605	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IB938_RS01620	COG1254	Belongs to the acylphosphatase family
IB938_RS01625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IB938_RS01680	COG1187	pseudouridine synthase activity
IB938_RS01695	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IB938_RS01700	COG0671	phosphoesterase, PA-phosphatase related
IB938_RS01705	COG1242	4 iron, 4 sulfur cluster binding
IB938_RS01710	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
IB938_RS01715	COG1253	flavin adenine dinucleotide binding
IB938_RS01720	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IB938_RS01735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IB938_RS01740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IB938_RS01745	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IB938_RS01750	COG1120	ATPase activity
IB938_RS01765	COG2244	polysaccharide biosynthetic process
IB938_RS01790	COG0470	DNA polymerase III
IB938_RS01820	COG1393	Belongs to the ArsC family
IB938_RS01825	COG0708	Exodeoxyribonuclease III
IB938_RS01830	COG1304	FMN binding
IB938_RS01905	COG1028	Short-chain dehydrogenase reductase Sdr
IB938_RS01910	COG0673	inositol 2-dehydrogenase activity
IB938_RS01925	COG0494	nUDIX hydrolase
IB938_RS01935	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IB938_RS02025	COG1702	phosphate starvation-inducible protein PhoH
IB938_RS02030	COG1573	uracil-dna glycosylase
IB938_RS02040	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IB938_RS02060	COG2274	protein secretion by the type I secretion system
IB938_RS02065	COG2274	protein secretion by the type I secretion system
IB938_RS02070	COG2274	protein secretion by the type I secretion system
IB938_RS02105	COG2801	Transposase and inactivated derivatives
IB938_RS02115	COG2801	Transposase and inactivated derivatives
IB938_RS02140	COG2274	protein secretion by the type I secretion system
IB938_RS02220	COG0433	COG0433 Predicted ATPase
IB938_RS02225	COG2814	Major facilitator Superfamily
IB938_RS02240	COG0557	exoribonuclease II activity
IB938_RS02270	COG0463	Glycosyl transferase, family 2
IB938_RS02280	COG0778	Nitroreductase
IB938_RS02285	COG0006	proline dipeptidase activity
IB938_RS02290	COG1609	Transcriptional regulator
IB938_RS02300	COG0438	transferase activity, transferring glycosyl groups
IB938_RS02310	COG4555	ABC transporter
IB938_RS02325	COG2376	Dihydroxyacetone kinase
IB938_RS02335	COG2376	Dihydroxyacetone kinase
IB938_RS02340	COG1461	Dihydroxyacetone kinase
IB938_RS02345	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
IB938_RS02350	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB938_RS02360	COG0183	Belongs to the thiolase family
IB938_RS02375	COG0745	RESPONSE REGULATOR receiver
IB938_RS02380	COG5002	protein histidine kinase activity
IB938_RS02385	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
IB938_RS02395	COG1196	nuclear chromosome segregation
IB938_RS02410	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
IB938_RS02535	COG0561	phosphatase activity
IB938_RS02540	COG0561	phosphatase activity
IB938_RS02545	COG0552	protein localization to endoplasmic reticulum
IB938_RS02550	COG0477	Major facilitator Superfamily
IB938_RS02555	COG3711	transcriptional antiterminator
IB938_RS02560	COG2190	(PTS) system
IB938_RS02560	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB938_RS02560	COG1263	PTS System
IB938_RS02570	COG3689	TIGRFAM TIGR03943 family protein
IB938_RS02575	COG0701	Predicted permease
IB938_RS02585	COG2183	response to ionizing radiation
IB938_RS02630	COG0826	peptidase U32
IB938_RS02635	COG4443	Transcriptional Coactivator p15 (PC4)
IB938_RS02685	COG0386	Belongs to the glutathione peroxidase family
IB938_RS02690	COG1164	Oligoendopeptidase f
IB938_RS02700	COG0772	Belongs to the SEDS family
IB938_RS02730	COG1078	dGTPase activity
IB938_RS02745	COG1609	Transcriptional regulator
IB938_RS02755	COG3716	PTS system mannose fructose sorbose family IID component
IB938_RS02760	COG3715	PTS system
IB938_RS02765	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB938_RS02780	COG1028	Short-chain dehydrogenase reductase Sdr
IB938_RS02795	COG0800	Aldolase
IB938_RS02800	COG0546	phosphoglycolate phosphatase activity
IB938_RS02810	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IB938_RS02820	COG2884	Cell division ATP-binding protein ftsE
IB938_RS02825	COG2177	Part of the ABC transporter FtsEX involved in
IB938_RS02840	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IB938_RS02840	COG1199	ATP-dependent helicase activity
IB938_RS02845	COG0436	Aminotransferase
IB938_RS02880	COG3620	sequence-specific DNA binding
IB938_RS02945	COG3723	Recombinational DNA repair protein, rece pathway
IB938_RS03020	COG1598	PFAM Uncharacterised protein family UPF0150
IB938_RS03065	COG0740	serine-type endopeptidase activity
IB938_RS03160	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB938_RS03190	COG2188	Transcriptional regulator
IB938_RS03195	COG2222	sugar isomerase
IB938_RS03205	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
IB938_RS03210	COG0716	FMN binding
IB938_RS03220	COG0038	chloride channel
IB938_RS03235	COG0582	viral genome integration into host DNA
IB938_RS03370	COG1475	DNA binding
IB938_RS03515	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB938_RS03600	COG1131	(ABC) transporter
IB938_RS03620	COG4708	membrane
IB938_RS03630	COG1597	lipid kinase activity
IB938_RS03715	COG0577	efflux transmembrane transporter activity
IB938_RS03720	COG1136	(ABC) transporter
IB938_RS03725	COG2321	neutral zinc metallopeptidase
IB938_RS03740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB938_RS03750	COG1970	mechanosensitive ion channel activity
IB938_RS03760	COG0358	DNA primase activity
IB938_RS03765	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IB938_RS03770	COG2151	metal-sulfur cluster biosynthetic enzyme
IB938_RS03815	COG1216	Glycosyl transferase, family 2
IB938_RS03875	COG1368	sulfuric ester hydrolase activity
IB938_RS03880	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IB938_RS03900	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IB938_RS03905	COG0285	dihydrofolate synthase activity
IB938_RS03915	COG1104	cysteine desulfurase activity
IB938_RS03945	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IB938_RS03950	COG0583	DNA-binding transcription factor activity
IB938_RS03960	COG0564	pseudouridine synthase activity
IB938_RS03990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IB938_RS03995	COG1136	(ABC) transporter
IB938_RS04000	COG0577	efflux transmembrane transporter activity
IB938_RS04005	COG0584	glycerophosphoryl diester phosphodiesterase
IB938_RS04015	COG1837	Belongs to the UPF0109 family
IB938_RS04070	COG1349	DNA-binding transcription factor activity
IB938_RS04075	COG1105	Belongs to the carbohydrate kinase PfkB family
IB938_RS04080	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IB938_RS04080	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IB938_RS04080	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IB938_RS04085	COG1388	LysM domain
IB938_RS04085	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB938_RS04090	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB938_RS04090	COG1388	LysM domain
IB938_RS04130	COG0488	(ABC) transporter
IB938_RS04135	COG0242	peptide deformylase activity
IB938_RS04140	COG0737	Belongs to the 5'-nucleotidase family
IB938_RS04145	COG2357	RelA SpoT domain protein
IB938_RS04150	COG0745	RESPONSE REGULATOR receiver
IB938_RS04185	COG3425	synthase
IB938_RS04195	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IB938_RS04250	COG0583	DNA-binding transcription factor activity
IB938_RS04275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB938_RS04280	COG0765	amino acid transport
IB938_RS04300	COG0187	DNA topoisomerase II activity
IB938_RS04310	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IB938_RS04335	COG0539	negative regulation of cytoplasmic translation
IB938_RS04380	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IB938_RS04385	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
IB938_RS04395	COG0300	oxidoreductase activity
IB938_RS04400	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IB938_RS04400	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
IB938_RS04415	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IB938_RS04420	COG2384	SAM-dependent methyltransferase
IB938_RS04430	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IB938_RS04435	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
IB938_RS04445	COG1088	dTDP-glucose 4,6-dehydratase activity
IB938_RS04450	COG0582	viral genome integration into host DNA
IB938_RS04585	COG1051	belongs to the nudix hydrolase family
IB938_RS04590	COG0628	permease
IB938_RS04595	COG0457	Tetratricopeptide repeat
IB938_RS04600	COG1293	RNA-binding protein homologous to eukaryotic snRNP
IB938_RS04615	COG1129	ABC transporter
IB938_RS04635	COG0488	(ABC) transporter
IB938_RS04640	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
IB938_RS04645	COG0022	dehydrogenase e1 component
IB938_RS04645	COG0508	dehydrogenase complex catalyzes the overall conversion of
IB938_RS04650	COG0508	dehydrogenase complex catalyzes the overall conversion of
IB938_RS04660	COG5492	domain, Protein
IB938_RS04665	COG0095	Lipoate-protein ligase
IB938_RS04670	COG3442	glutamine amidotransferase
IB938_RS04675	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IB938_RS04680	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IB938_RS04700	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IB938_RS04710	COG0647	UMP catabolic process
IB938_RS04725	COG1518	maintenance of DNA repeat elements
IB938_RS04730	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IB938_RS04775	COG3715	PTS system
IB938_RS04780	COG3716	PTS system mannose fructose sorbose family IID component
IB938_RS04785	COG2972	Histidine kinase
IB938_RS04790	COG4753	response regulator
IB938_RS04790	COG2207	Transcriptional regulator
IB938_RS04800	COG1012	belongs to the aldehyde dehydrogenase family
IB938_RS04815	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IB938_RS04890	COG1131	(ABC) transporter
IB938_RS04905	COG1396	sequence-specific DNA binding
IB938_RS04935	COG0285	dihydrofolate synthase activity
IB938_RS04955	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IB938_RS04970	COG1176	ABC-type spermidine putrescine transport system, permease component I
IB938_RS04975	COG1177	transmembrane transport
IB938_RS04985	COG4565	transcriptional regulatory protein
IB938_RS04990	COG3290	protein histidine kinase activity
IB938_RS04995	COG3493	citrate carrier protein
IB938_RS05010	COG3700	Belongs to the class B bacterial acid phosphatase family
IB938_RS05015	COG0038	chloride channel
IB938_RS05025	COG0628	permease
IB938_RS05035	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
IB938_RS05050	COG1104	cysteine desulfurase activity
IB938_RS05065	COG2357	RelA SpoT domain protein
IB938_RS05075	COG0564	pseudouridine synthase activity
IB938_RS05080	COG0280	phosphate acetyltransferase
IB938_RS05085	COG4221	oxidoreductase activity
IB938_RS05100	COG1174	glycine betaine transport
IB938_RS05115	COG2233	PERMEase
IB938_RS05140	COG2890	protein-(glutamine-N5) methyltransferase activity
IB938_RS05170	COG1132	(ABC) transporter
IB938_RS05175	COG1132	(ABC) transporter
IB938_RS05195	COG3764	Sortase (surface protein transpeptidase)
IB938_RS05200	COG0346	lactoylglutathione lyase activity
IB938_RS05215	COG1272	protein, Hemolysin III
IB938_RS05235	COG0758	DNA mediated transformation
IB938_RS05240	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IB938_RS05285	COG0511	ligase activity, forming carbon-carbon bonds
IB938_RS05290	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IB938_RS05305	COG2851	Citrate transporter
IB938_RS05315	COG0511	ligase activity, forming carbon-carbon bonds
IB938_RS05320	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IB938_RS05350	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IB938_RS05370	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IB938_RS05380	COG2188	Transcriptional regulator
IB938_RS05400	COG0488	(ABC) transporter
IB938_RS05410	COG0351	phosphomethylpyrimidine kinase
IB938_RS05410	COG0352	thiamine-phosphate diphosphorylase activity
IB938_RS05415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IB938_RS05420	COG1328	CTP reductase activity
IB938_RS05420	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IB938_RS05425	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IB938_RS05455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IB938_RS05465	COG0095	Lipoate-protein ligase
IB938_RS05475	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IB938_RS05480	COG4684	Psort location CytoplasmicMembrane, score
IB938_RS05485	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IB938_RS05490	COG1079	Belongs to the binding-protein-dependent transport system permease family
IB938_RS05495	COG4603	Belongs to the binding-protein-dependent transport system permease family
IB938_RS05500	COG3845	ABC transporter
IB938_RS05505	COG1744	ABC transporter substrate-binding protein PnrA-like
IB938_RS05510	COG0295	cytidine deaminase activity
IB938_RS05515	COG2813	Specifically methylates the guanine in position
IB938_RS05530	COG5002	protein histidine kinase activity
IB938_RS05535	COG0745	RESPONSE REGULATOR receiver
IB938_RS05545	COG0704	Plays a role in the regulation of phosphate uptake
IB938_RS05560	COG0581	inorganic phosphate transmembrane transporter activity
IB938_RS05565	COG0573	inorganic phosphate transmembrane transporter activity
IB938_RS05575	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IB938_RS05575	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
IB938_RS05580	COG0483	inositol monophosphate 1-phosphatase activity
IB938_RS05595	COG0196	riboflavin kinase activity
IB938_RS05625	COG4591	ABC-type transport system involved in lipoprotein release permease component
IB938_RS05625	COG1136	(ABC) transporter
IB938_RS05675	COG1115	amino acid carrier protein
IB938_RS05680	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
IB938_RS05690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB938_RS05695	COG1126	abc transporter atp-binding protein
IB938_RS05700	COG0765	amino acid transport
IB938_RS05705	COG2824	Alkylphosphonate utilization operon protein PhnA
IB938_RS05720	COG0469	pyruvate kinase activity
IB938_RS05735	COG1725	Transcriptional regulator
IB938_RS05740	COG1131	(ABC) transporter
IB938_RS05765	COG0058	SHG alpha-glucan phosphorylase activity
IB938_RS05770	COG1640	4-alpha-glucanotransferase
IB938_RS05775	COG1609	Transcriptional regulator
IB938_RS05780	COG2182	Extracellular solute-binding protein
IB938_RS05785	COG1175	transmembrane transport
IB938_RS05790	COG3833	ABC-type maltose transport systems, permease component
IB938_RS05805	COG3833	ABC-type maltose transport systems, permease component
IB938_RS05810	COG1175	transmembrane transport
IB938_RS05820	COG0366	Alpha amylase catalytic
IB938_RS05825	COG2182	Extracellular solute-binding protein
IB938_RS05830	COG0657	acetylesterase activity
IB938_RS05835	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IB938_RS05845	COG1696	Membrane protein involved in D-alanine export
IB938_RS05865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB938_RS05870	COG1126	abc transporter atp-binding protein
IB938_RS05880	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB938_RS05890	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB938_RS05900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IB938_RS05900	COG3711	transcriptional antiterminator
IB938_RS05910	COG2723	6-phospho-beta-galactosidase activity
IB938_RS05940	COG0157	Belongs to the NadC ModD family
IB938_RS05955	COG2801	Transposase and inactivated derivatives
IB938_RS05960	COG2801	Transposase and inactivated derivatives
IB938_RS05965	COG1187	pseudouridine synthase activity
IB938_RS05975	COG2814	Major facilitator Superfamily
IB938_RS06025	COG4109	DRTGG domain
IB938_RS06030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IB938_RS06055	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IB938_RS06055	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IB938_RS06065	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IB938_RS06070	COG1956	GAF domain-containing protein
IB938_RS06090	COG0513	Belongs to the DEAD box helicase family
IB938_RS06100	COG0726	polysaccharide deacetylase
IB938_RS06120	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IB938_RS06125	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IB938_RS06160	COG1476	TRANSCRIPTIONal
IB938_RS06175	COG4122	O-methyltransferase activity
IB938_RS06180	COG2223	nitrite transmembrane transporter activity
IB938_RS06195	COG1187	pseudouridine synthase activity
IB938_RS06240	COG2333	competence protein COMEC
IB938_RS06240	COG0658	competence protein
IB938_RS06245	COG1596	polysaccharide export
IB938_RS06245	COG1555	photosystem II stabilization
IB938_RS06250	COG0204	Acyl-transferase
IB938_RS06255	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
IB938_RS06270	COG0513	Belongs to the DEAD box helicase family
IB938_RS06285	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IB938_RS06300	COG2116	formate transmembrane transporter activity
IB938_RS06310	COG1827	regulation of RNA biosynthetic process
IB938_RS06330	COG2217	Heavy metal translocating P-type atpase
IB938_RS06345	COG3177	Filamentation induced by cAMP protein fic
IB938_RS06540	COG3723	Recombinational DNA repair protein, rece pathway
IB938_RS06585	COG1396	sequence-specific DNA binding
IB938_RS06595	COG0582	viral genome integration into host DNA
IB938_RS06610	COG2755	lipolytic protein G-D-S-L family
IB938_RS06625	COG0497	DNA recombination
IB938_RS06630	COG1438	arginine binding
IB938_RS06635	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
IB938_RS06660	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IB938_RS06665	COG0415	Belongs to the DNA photolyase family
IB938_RS06675	COG0765	amino acid transport
IB938_RS06680	COG4703	Protein of unknown function (DUF1797)
IB938_RS06685	COG0542	response to heat
IB938_RS06690	COG0494	nUDIX hydrolase
IB938_RS06705	COG3599	regulation of cell shape
IB938_RS06710	COG2302	S4 RNA-binding domain
IB938_RS06725	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IB938_RS06760	COG1217	gtp-binding protein TYPA
IB938_RS06765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IB938_RS06770	COG1940	carbohydrate kinase activity
IB938_RS06780	COG0783	Belongs to the Dps family
IB938_RS06795	COG4470	Protein conserved in bacteria
IB938_RS06800	COG1609	Transcriptional regulator
IB938_RS06805	COG3480	Lon protease (S16) C-terminal proteolytic domain
IB938_RS06815	COG0742	ribosomal rna small subunit methyltransferase
IB938_RS06825	COG0549	Belongs to the carbamate kinase family
IB938_RS06830	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IB938_RS06835	COG1288	antiporter activity
IB938_RS06845	COG0454	-acetyltransferase
IB938_RS06850	COG2235	arginine
IB938_RS06875	COG2972	Histidine kinase
IB938_RS06890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IB938_RS06895	COG0785	Cytochrome C biogenesis protein
IB938_RS06900	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IB938_RS06905	COG1518	maintenance of DNA repeat elements
IB938_RS06965	COG1605	Chorismate mutase
IB938_RS06965	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
IB938_RS06985	COG2226	methyltransferase
IB938_RS06995	COG3250	beta-galactosidase activity
IB938_RS07000	COG4753	response regulator
IB938_RS07000	COG2207	Transcriptional regulator
IB938_RS07005	COG2972	Histidine kinase
IB938_RS07015	COG1653	transport
IB938_RS07020	COG0395	ABC-type sugar transport system, permease component
IB938_RS07025	COG1175	transmembrane transport
IB938_RS07030	COG1940	carbohydrate kinase activity
IB938_RS07035	COG2723	6-phospho-beta-galactosidase activity
IB938_RS07040	COG3525	Glycosyl hydrolase, family 20, catalytic domain
IB938_RS07055	COG0383	alpha-mannosidase activity
IB938_RS07150	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
IB938_RS07155	COG1739	Uncharacterized protein family UPF0029
IB938_RS07165	COG1098	S1 RNA binding domain
IB938_RS07175	COG2197	response regulator
IB938_RS07180	COG4585	Histidine kinase
IB938_RS07190	COG2815	serine threonine protein kinase
IB938_RS07190	COG0515	serine threonine protein kinase
IB938_RS07200	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IB938_RS07200	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IB938_RS07210	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IB938_RS07230	COG0583	DNA-binding transcription factor activity
IB938_RS07235	COG0183	Belongs to the thiolase family
IB938_RS07240	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IB938_RS07250	COG1028	Short-chain dehydrogenase reductase Sdr
IB938_RS07255	COG2610	gluconate transmembrane transporter activity
IB938_RS07270	COG0116	Belongs to the methyltransferase superfamily
IB938_RS07295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB938_RS07300	COG3579	cysteine-type endopeptidase activity
IB938_RS07310	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IB938_RS07315	COG1113	amino acid transport
IB938_RS07320	COG0492	ferredoxin-NADP+ reductase activity
IB938_RS07330	COG1126	abc transporter atp-binding protein
IB938_RS07340	COG0513	Belongs to the DEAD box helicase family
IB938_RS07350	COG0768	penicillin binding
IB938_RS07385	COG1131	(ABC) transporter
IB938_RS07410	COG0446	pyridine nucleotide-disulphide oxidoreductase
IB938_RS07415	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB938_RS07450	COG1755	Isoprenylcysteine carboxyl methyltransferase
IB938_RS07455	COG0656	L-ascorbic acid biosynthetic process
IB938_RS07465	COG1283	sodium-dependent phosphate transmembrane transporter activity
IB938_RS07485	COG0561	phosphatase activity
IB938_RS07490	COG2860	membrane
IB938_RS07540	COG2217	Heavy metal translocating P-type atpase
IB938_RS07570	COG2740	Nucleic-acid-binding protein implicated in transcription termination
IB938_RS07575	COG0195	Participates in both transcription termination and antitermination
IB938_RS07600	COG4473	ABC transporter
IB938_RS07605	COG1131	(ABC) transporter
IB938_RS07610	COG0537	adenosine 5'-monophosphoramidase activity
IB938_RS07620	COG1316	TRANSCRIPTIONal
IB938_RS07630	COG0802	atpase or kinase
IB938_RS07635	COG2252	PERMEase
IB938_RS07640	COG0561	phosphatase activity
IB938_RS07650	COG3715	PTS system
IB938_RS07655	COG3716	PTS system mannose fructose sorbose family IID component
IB938_RS07680	COG0439	Biotin carboxylase
IB938_RS07695	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IB938_RS07700	COG1028	Short-chain dehydrogenase reductase Sdr
IB938_RS07705	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
IB938_RS07730	COG1024	Enoyl-CoA hydratase
IB938_RS07735	COG0484	heat shock protein binding
IB938_RS07765	COG0588	phosphoglycerate mutase activity
IB938_RS07770	COG2261	transglycosylase associated protein
IB938_RS07800	COG1335	isochorismatase
IB938_RS07810	COG0436	Aminotransferase
IB938_RS07820	COG0561	phosphatase activity
IB938_RS07825	COG0252	asparaginase activity
IB938_RS07840	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IB938_RS07845	COG1129	ABC transporter
IB938_RS07860	COG1132	(ABC) transporter
IB938_RS07865	COG4988	ABC transporter
IB938_RS07870	COG1120	ATPase activity
IB938_RS07895	COG1388	LysM domain
IB938_RS07895	COG3942	CHAP domain
IB938_RS07920	COG1482	cell wall glycoprotein biosynthetic process
IB938_RS07925	COG1940	carbohydrate kinase activity
IB938_RS07935	COG2190	(PTS) system
IB938_RS07935	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB938_RS07935	COG1263	PTS System
IB938_RS07940	COG1621	beta-fructofuranosidase activity
IB938_RS07945	COG1609	Transcriptional regulator
IB938_RS07965	COG2131	deaminase
IB938_RS07970	COG0006	proline dipeptidase activity
IB938_RS08010	COG1194	a g-specific adenine glycosylase
IB938_RS08015	COG3620	sequence-specific DNA binding
IB938_RS08020	COG3118	belongs to the thioredoxin family
IB938_RS08050	COG0681	Belongs to the peptidase S26 family
IB938_RS08055	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IB938_RS08070	COG1882	Formate acetyltransferase
IB938_RS08075	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
IB938_RS08090	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB938_RS08095	COG2814	Major facilitator Superfamily
IB938_RS08100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IB938_RS08125	COG0789	Transcriptional regulator
IB938_RS08140	COG2081	HI0933 family
IB938_RS08150	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IB938_RS08155	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
IB938_RS08175	COG0456	acetyltransferase
IB938_RS08180	COG1214	PFAM Peptidase M22, glycoprotease
IB938_RS08195	COG0174	glutamine synthetase
IB938_RS08200	COG0789	Transcriptional regulator
IB938_RS08215	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
IB938_RS08270	COG0668	transmembrane transport
IB938_RS08280	COG4720	Psort location CytoplasmicMembrane, score
IB938_RS08285	COG0351	phosphomethylpyrimidine kinase
IB938_RS08330	COG1929	Belongs to the glycerate kinase type-1 family
IB938_RS08335	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
IB938_RS08360	COG0577	efflux transmembrane transporter activity
IB938_RS08365	COG1136	(ABC) transporter
IB938_RS08370	COG2274	protein secretion by the type I secretion system
IB938_RS08390	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB938_RS08390	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB938_RS08395	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB938_RS08445	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IB938_RS08450	COG1476	TRANSCRIPTIONal
IB938_RS08470	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IB938_RS08480	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IB938_RS08495	COG1045	serine acetyltransferase
IB938_RS08510	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IB938_RS08525	COG3711	transcriptional antiterminator
IB938_RS08550	COG0431	NADPH-dependent FMN reductase
IB938_RS08555	COG1846	Transcriptional regulator
IB938_RS08575	COG4589	Belongs to the CDS family
IB938_RS08585	COG1862	Preprotein translocase
IB938_RS08595	COG1523	belongs to the glycosyl hydrolase 13 family
IB938_RS08605	COG3842	ATPase activity
IB938_RS08650	COG1263	PTS System
IB938_RS08650	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB938_RS08650	COG2190	(PTS) system
IB938_RS08655	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IB938_RS08675	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IB938_RS08680	COG0512	Glutamine amidotransferase of anthranilate synthase
IB938_RS08685	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IB938_RS08725	COG0601	transmembrane transport
IB938_RS08735	COG1122	ATPase activity
IB938_RS08755	COG0803	Belongs to the bacterial solute-binding protein 9 family
IB938_RS08780	COG3711	transcriptional antiterminator
IB938_RS08790	COG3942	CHAP domain
IB938_RS08790	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB938_RS08795	COG2205	protein histidine kinase activity
IB938_RS08800	COG0745	RESPONSE REGULATOR receiver
IB938_RS08805	COG0577	efflux transmembrane transporter activity
IB938_RS08810	COG1136	(ABC) transporter
IB938_RS08875	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IB938_RS08890	COG1882	Formate acetyltransferase
IB938_RS08895	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB938_RS08900	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB938_RS08905	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB938_RS08910	COG2390	Transcriptional regulator
IB938_RS08915	COG1349	DNA-binding transcription factor activity
IB938_RS08920	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IB938_RS08935	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB938_RS08945	COG0564	pseudouridine synthase activity
IB938_RS08975	COG0542	response to heat
IB938_RS08980	COG4463	regulation of RNA biosynthetic process
IB938_RS08995	COG0450	alkyl hydroperoxide reductase
IB938_RS09010	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
IB938_RS09020	COG3404	Formiminotransferase-cyclodeaminase
IB938_RS09035	COG0531	amino acid
IB938_RS09065	COG3590	peptidase
IB938_RS09070	COG0366	Alpha amylase catalytic
IB938_RS09075	COG1263	PTS System
IB938_RS09075	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB938_RS09080	COG2188	Transcriptional regulator
IB938_RS09085	COG1733	regulation of RNA biosynthetic process
IB938_RS09090	COG2514	catechol 2,3-dioxygenase activity
IB938_RS09100	COG0602	queuosine metabolic process
IB938_RS09120	COG1328	CTP reductase activity
IB938_RS09145	COG1393	Belongs to the ArsC family
IB938_RS09160	COG0519	Catalyzes the synthesis of GMP from XMP
IB938_RS09180	COG0582	viral genome integration into host DNA
IB938_RS09325	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB938_RS09330	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB938_RS09335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB938_RS09415	COG1511	domain protein
IB938_RS09435	COG0305	Participates in initiation and elongation during chromosome replication
IB938_RS09465	COG1760	l-serine dehydratase
IB938_RS09470	COG1760	l-serine dehydratase
IB938_RS09475	COG0741	lytic transglycosylase activity
IB938_RS09480	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IB938_RS09495	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IB938_RS09505	COG0612	Peptidase, M16
IB938_RS09530	COG0516	GMP reductase activity
IB938_RS09530	COG0517	IMP dehydrogenase activity
IB938_RS09540	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB938_RS09545	COG0488	(ABC) transporter
IB938_RS09580	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IB938_RS09585	COG1475	DNA binding