locus-tag	class	description
IB935_RS00010	COG0592	DNA-directed DNA polymerase activity
IB935_RS00020	COG0012	GTP binding
IB935_RS00030	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IB935_RS00035	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IB935_RS00060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IB935_RS00065	COG0531	amino acid
IB935_RS00245	COG3942	CHAP domain
IB935_RS00265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IB935_RS00275	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IB935_RS00290	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IB935_RS00310	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IB935_RS00330	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IB935_RS00345	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IB935_RS00360	COG1012	belongs to the aldehyde dehydrogenase family
IB935_RS00360	COG1454	alcohol dehydrogenase
IB935_RS00365	COG1064	alcohol dehydrogenase
IB935_RS00370	COG0534	Mate efflux family protein
IB935_RS00480	COG0201	protein transport
IB935_RS00630	COG1121	(ABC) transporter
IB935_RS00635	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IB935_RS00650	COG4499	WXG100 protein secretion system (Wss), protein YukC
IB935_RS00650	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB935_RS00670	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IB935_RS00675	COG1459	type II secretion system
IB935_RS00680	COG4537	Required for transformation and DNA binding
IB935_RS00720	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IB935_RS00725	COG1363	Peptidase, m42
IB935_RS00735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IB935_RS00740	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IB935_RS00750	COG1428	Deoxynucleoside kinase
IB935_RS00755	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IB935_RS00815	COG2031	fatty acid transporter
IB935_RS00830	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IB935_RS00845	COG0251	oxidation-reduction process
IB935_RS00860	COG1269	ATP hydrolysis coupled proton transport
IB935_RS00865	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IB935_RS00875	COG1527	subunit (C
IB935_RS00880	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
IB935_RS00915	COG1744	ABC transporter substrate-binding protein PnrA-like
IB935_RS00960	COG0626	cystathionine gamma-synthase activity
IB935_RS00990	COG3623	hexulose-6-phosphate isomerase
IB935_RS01010	COG4175	Glycine betaine
IB935_RS01010	COG3448	diguanylate cyclase activity
IB935_RS01020	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IB935_RS01020	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IB935_RS01050	COG1268	BioY protein
IB935_RS01055	COG1234	tRNA 3'-trailer cleavage
IB935_RS01095	COG0457	Tetratricopeptide repeat
IB935_RS01095	COG0705	Rhomboid family
IB935_RS01115	COG1132	(ABC) transporter
IB935_RS01120	COG1132	(ABC) transporter
IB935_RS01130	COG0756	dUTP diphosphatase activity
IB935_RS01155	COG3290	protein histidine kinase activity
IB935_RS01180	COG1847	R3H domain protein
IB935_RS01200	COG1175	transmembrane transport
IB935_RS01205	COG0395	ABC-type sugar transport system, permease component
IB935_RS01220	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IB935_RS01235	COG0084	hydrolase, TatD family'
IB935_RS01260	COG1564	THIamine pyrophosphokinase
IB935_RS01275	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IB935_RS01315	COG0765	amino acid transport
IB935_RS01335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IB935_RS01345	COG0719	Fe-S assembly protein
IB935_RS01350	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IB935_RS01365	COG1686	Belongs to the peptidase S11 family
IB935_RS01370	COG1686	Belongs to the peptidase S11 family
IB935_RS01375	COG4166	transmembrane transport
IB935_RS01380	COG0601	transmembrane transport
IB935_RS01385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IB935_RS01390	COG0444	Belongs to the ABC transporter superfamily
IB935_RS01400	COG2801	Transposase and inactivated derivatives
IB935_RS01440	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
IB935_RS01445	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IB935_RS01450	COG1534	Rna-binding protein
IB935_RS01460	COG1713	HD superfamily hydrolase involved in NAD metabolism
IB935_RS01470	COG0799	negative regulation of ribosome biogenesis
IB935_RS01475	COG2226	methyltransferase
IB935_RS01490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB935_RS01495	COG1464	Belongs to the NlpA lipoprotein family
IB935_RS01510	COG1114	Component of the transport system for branched-chain amino acids
IB935_RS01520	COG0569	domain protein
IB935_RS01525	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IB935_RS01535	COG1704	LemA family
IB935_RS01550	COG0745	RESPONSE REGULATOR receiver
IB935_RS01570	COG1484	DNA-dependent DNA replication
IB935_RS01580	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IB935_RS01600	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IB935_RS01615	COG1254	Belongs to the acylphosphatase family
IB935_RS01620	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IB935_RS01675	COG1187	pseudouridine synthase activity
IB935_RS01690	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IB935_RS01695	COG0671	phosphoesterase, PA-phosphatase related
IB935_RS01700	COG1242	4 iron, 4 sulfur cluster binding
IB935_RS01705	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
IB935_RS01710	COG1253	flavin adenine dinucleotide binding
IB935_RS01715	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IB935_RS01730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IB935_RS01735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IB935_RS01740	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IB935_RS01745	COG1120	ATPase activity
IB935_RS01760	COG2244	polysaccharide biosynthetic process
IB935_RS01785	COG0470	DNA polymerase III
IB935_RS01815	COG1393	Belongs to the ArsC family
IB935_RS01820	COG0708	Exodeoxyribonuclease III
IB935_RS01825	COG1304	FMN binding
IB935_RS01905	COG1028	Short-chain dehydrogenase reductase Sdr
IB935_RS01910	COG0673	inositol 2-dehydrogenase activity
IB935_RS01925	COG0494	nUDIX hydrolase
IB935_RS01935	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IB935_RS02025	COG1702	phosphate starvation-inducible protein PhoH
IB935_RS02030	COG1573	uracil-dna glycosylase
IB935_RS02040	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IB935_RS02060	COG2274	protein secretion by the type I secretion system
IB935_RS02065	COG2274	protein secretion by the type I secretion system
IB935_RS02070	COG2274	protein secretion by the type I secretion system
IB935_RS02105	COG2801	Transposase and inactivated derivatives
IB935_RS02115	COG2801	Transposase and inactivated derivatives
IB935_RS02140	COG2274	protein secretion by the type I secretion system
IB935_RS02220	COG0433	COG0433 Predicted ATPase
IB935_RS02225	COG2814	Major facilitator Superfamily
IB935_RS02240	COG0557	exoribonuclease II activity
IB935_RS02270	COG0463	Glycosyl transferase, family 2
IB935_RS02280	COG0778	Nitroreductase
IB935_RS02285	COG0006	proline dipeptidase activity
IB935_RS02290	COG1609	Transcriptional regulator
IB935_RS02300	COG0438	transferase activity, transferring glycosyl groups
IB935_RS02310	COG4555	ABC transporter
IB935_RS02325	COG2376	Dihydroxyacetone kinase
IB935_RS02335	COG2376	Dihydroxyacetone kinase
IB935_RS02340	COG1461	Dihydroxyacetone kinase
IB935_RS02345	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
IB935_RS02350	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB935_RS02360	COG0183	Belongs to the thiolase family
IB935_RS02375	COG0745	RESPONSE REGULATOR receiver
IB935_RS02380	COG5002	protein histidine kinase activity
IB935_RS02385	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
IB935_RS02395	COG1196	nuclear chromosome segregation
IB935_RS02410	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
IB935_RS02535	COG0561	phosphatase activity
IB935_RS02540	COG0561	phosphatase activity
IB935_RS02545	COG0552	protein localization to endoplasmic reticulum
IB935_RS02550	COG0477	Major facilitator Superfamily
IB935_RS02555	COG3711	transcriptional antiterminator
IB935_RS02560	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB935_RS02560	COG1263	PTS System
IB935_RS02560	COG2190	(PTS) system
IB935_RS02570	COG3689	TIGRFAM TIGR03943 family protein
IB935_RS02575	COG0701	Predicted permease
IB935_RS02585	COG2183	response to ionizing radiation
IB935_RS02630	COG0826	peptidase U32
IB935_RS02635	COG4443	Transcriptional Coactivator p15 (PC4)
IB935_RS02685	COG0386	Belongs to the glutathione peroxidase family
IB935_RS02690	COG1164	Oligoendopeptidase f
IB935_RS02700	COG0772	Belongs to the SEDS family
IB935_RS02730	COG1078	dGTPase activity
IB935_RS02745	COG1609	Transcriptional regulator
IB935_RS02755	COG3716	PTS system mannose fructose sorbose family IID component
IB935_RS02760	COG3715	PTS system
IB935_RS02765	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB935_RS02780	COG1028	Short-chain dehydrogenase reductase Sdr
IB935_RS02795	COG0800	Aldolase
IB935_RS02800	COG0546	phosphoglycolate phosphatase activity
IB935_RS02810	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IB935_RS02820	COG2884	Cell division ATP-binding protein ftsE
IB935_RS02825	COG2177	Part of the ABC transporter FtsEX involved in
IB935_RS02840	COG1199	ATP-dependent helicase activity
IB935_RS02840	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IB935_RS02845	COG0436	Aminotransferase
IB935_RS02935	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB935_RS02965	COG2188	Transcriptional regulator
IB935_RS02970	COG2222	sugar isomerase
IB935_RS02980	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
IB935_RS02985	COG0716	FMN binding
IB935_RS02995	COG0038	chloride channel
IB935_RS03080	COG1131	(ABC) transporter
IB935_RS03100	COG4708	membrane
IB935_RS03110	COG1597	lipid kinase activity
IB935_RS03195	COG0577	efflux transmembrane transporter activity
IB935_RS03200	COG1136	(ABC) transporter
IB935_RS03205	COG2321	neutral zinc metallopeptidase
IB935_RS03220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB935_RS03230	COG1970	mechanosensitive ion channel activity
IB935_RS03240	COG0358	DNA primase activity
IB935_RS03245	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IB935_RS03250	COG2151	metal-sulfur cluster biosynthetic enzyme
IB935_RS03295	COG1216	Glycosyl transferase, family 2
IB935_RS03355	COG1368	sulfuric ester hydrolase activity
IB935_RS03360	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IB935_RS03380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IB935_RS03385	COG0285	dihydrofolate synthase activity
IB935_RS03395	COG1104	cysteine desulfurase activity
IB935_RS03425	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IB935_RS03430	COG0583	DNA-binding transcription factor activity
IB935_RS03440	COG0564	pseudouridine synthase activity
IB935_RS03470	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IB935_RS03475	COG1136	(ABC) transporter
IB935_RS03480	COG0577	efflux transmembrane transporter activity
IB935_RS03485	COG0584	glycerophosphoryl diester phosphodiesterase
IB935_RS03495	COG1837	Belongs to the UPF0109 family
IB935_RS03550	COG1349	DNA-binding transcription factor activity
IB935_RS03555	COG1105	Belongs to the carbohydrate kinase PfkB family
IB935_RS03560	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IB935_RS03560	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IB935_RS03560	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IB935_RS03565	COG1388	LysM domain
IB935_RS03565	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB935_RS03570	COG1388	LysM domain
IB935_RS03570	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB935_RS03610	COG0488	(ABC) transporter
IB935_RS03615	COG0242	peptide deformylase activity
IB935_RS03620	COG0737	Belongs to the 5'-nucleotidase family
IB935_RS03625	COG2357	RelA SpoT domain protein
IB935_RS03630	COG0745	RESPONSE REGULATOR receiver
IB935_RS03665	COG3425	synthase
IB935_RS03675	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IB935_RS03735	COG0583	DNA-binding transcription factor activity
IB935_RS03760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB935_RS03765	COG0765	amino acid transport
IB935_RS03785	COG0187	DNA topoisomerase II activity
IB935_RS03795	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IB935_RS03820	COG0539	negative regulation of cytoplasmic translation
IB935_RS03865	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IB935_RS03870	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
IB935_RS03880	COG0300	oxidoreductase activity
IB935_RS03885	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IB935_RS03885	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
IB935_RS03900	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IB935_RS03905	COG2384	SAM-dependent methyltransferase
IB935_RS03915	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IB935_RS03920	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
IB935_RS03930	COG1088	dTDP-glucose 4,6-dehydratase activity
IB935_RS03935	COG0582	viral genome integration into host DNA
IB935_RS04070	COG1051	belongs to the nudix hydrolase family
IB935_RS04075	COG0628	permease
IB935_RS04080	COG0457	Tetratricopeptide repeat
IB935_RS04085	COG1293	RNA-binding protein homologous to eukaryotic snRNP
IB935_RS04100	COG1129	ABC transporter
IB935_RS04120	COG0488	(ABC) transporter
IB935_RS04125	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
IB935_RS04130	COG0022	dehydrogenase e1 component
IB935_RS04130	COG0508	dehydrogenase complex catalyzes the overall conversion of
IB935_RS04135	COG0508	dehydrogenase complex catalyzes the overall conversion of
IB935_RS04145	COG5492	domain, Protein
IB935_RS04150	COG0095	Lipoate-protein ligase
IB935_RS04155	COG3442	glutamine amidotransferase
IB935_RS04160	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IB935_RS04165	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IB935_RS04185	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IB935_RS04195	COG0647	UMP catabolic process
IB935_RS04210	COG1518	maintenance of DNA repeat elements
IB935_RS04215	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IB935_RS04260	COG3715	PTS system
IB935_RS04265	COG3716	PTS system mannose fructose sorbose family IID component
IB935_RS04270	COG2972	Histidine kinase
IB935_RS04275	COG4753	response regulator
IB935_RS04275	COG2207	Transcriptional regulator
IB935_RS04285	COG1012	belongs to the aldehyde dehydrogenase family
IB935_RS04300	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IB935_RS04375	COG1131	(ABC) transporter
IB935_RS04390	COG1396	sequence-specific DNA binding
IB935_RS04415	COG0285	dihydrofolate synthase activity
IB935_RS04435	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IB935_RS04450	COG1176	ABC-type spermidine putrescine transport system, permease component I
IB935_RS04455	COG1177	transmembrane transport
IB935_RS04465	COG4565	transcriptional regulatory protein
IB935_RS04470	COG3290	protein histidine kinase activity
IB935_RS04475	COG3493	citrate carrier protein
IB935_RS04490	COG3700	Belongs to the class B bacterial acid phosphatase family
IB935_RS04495	COG0038	chloride channel
IB935_RS04505	COG0628	permease
IB935_RS04515	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
IB935_RS04530	COG1104	cysteine desulfurase activity
IB935_RS04545	COG2357	RelA SpoT domain protein
IB935_RS04555	COG0564	pseudouridine synthase activity
IB935_RS04560	COG0280	phosphate acetyltransferase
IB935_RS04565	COG4221	oxidoreductase activity
IB935_RS04580	COG1174	glycine betaine transport
IB935_RS04595	COG2233	PERMEase
IB935_RS04620	COG2890	protein-(glutamine-N5) methyltransferase activity
IB935_RS04650	COG1132	(ABC) transporter
IB935_RS04655	COG1132	(ABC) transporter
IB935_RS04675	COG3764	Sortase (surface protein transpeptidase)
IB935_RS04680	COG0346	lactoylglutathione lyase activity
IB935_RS04695	COG1272	protein, Hemolysin III
IB935_RS04715	COG0758	DNA mediated transformation
IB935_RS04720	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IB935_RS04765	COG0511	ligase activity, forming carbon-carbon bonds
IB935_RS04770	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IB935_RS04785	COG2851	Citrate transporter
IB935_RS04795	COG0511	ligase activity, forming carbon-carbon bonds
IB935_RS04800	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IB935_RS04830	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IB935_RS04850	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IB935_RS04860	COG2188	Transcriptional regulator
IB935_RS04880	COG0488	(ABC) transporter
IB935_RS04890	COG0352	thiamine-phosphate diphosphorylase activity
IB935_RS04890	COG0351	phosphomethylpyrimidine kinase
IB935_RS04895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IB935_RS04900	COG1328	CTP reductase activity
IB935_RS04900	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IB935_RS04905	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IB935_RS04935	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IB935_RS04945	COG0095	Lipoate-protein ligase
IB935_RS04955	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IB935_RS04960	COG4684	Psort location CytoplasmicMembrane, score
IB935_RS04965	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IB935_RS04970	COG1079	Belongs to the binding-protein-dependent transport system permease family
IB935_RS04975	COG4603	Belongs to the binding-protein-dependent transport system permease family
IB935_RS04980	COG3845	ABC transporter
IB935_RS04985	COG1744	ABC transporter substrate-binding protein PnrA-like
IB935_RS04990	COG0295	cytidine deaminase activity
IB935_RS04995	COG2813	Specifically methylates the guanine in position
IB935_RS05010	COG5002	protein histidine kinase activity
IB935_RS05015	COG0745	RESPONSE REGULATOR receiver
IB935_RS05025	COG0704	Plays a role in the regulation of phosphate uptake
IB935_RS05040	COG0581	inorganic phosphate transmembrane transporter activity
IB935_RS05045	COG0573	inorganic phosphate transmembrane transporter activity
IB935_RS05055	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
IB935_RS05055	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IB935_RS05060	COG0483	inositol monophosphate 1-phosphatase activity
IB935_RS05075	COG0196	riboflavin kinase activity
IB935_RS05105	COG4591	ABC-type transport system involved in lipoprotein release permease component
IB935_RS05105	COG1136	(ABC) transporter
IB935_RS05155	COG1115	amino acid carrier protein
IB935_RS05160	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
IB935_RS05170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB935_RS05175	COG1126	abc transporter atp-binding protein
IB935_RS05180	COG0765	amino acid transport
IB935_RS05185	COG2824	Alkylphosphonate utilization operon protein PhnA
IB935_RS05200	COG0469	pyruvate kinase activity
IB935_RS05215	COG1725	Transcriptional regulator
IB935_RS05220	COG1131	(ABC) transporter
IB935_RS05245	COG0058	SHG alpha-glucan phosphorylase activity
IB935_RS05250	COG1640	4-alpha-glucanotransferase
IB935_RS05255	COG1609	Transcriptional regulator
IB935_RS05260	COG2182	Extracellular solute-binding protein
IB935_RS05265	COG1175	transmembrane transport
IB935_RS05270	COG3833	ABC-type maltose transport systems, permease component
IB935_RS05285	COG3833	ABC-type maltose transport systems, permease component
IB935_RS05290	COG1175	transmembrane transport
IB935_RS05300	COG0366	Alpha amylase catalytic
IB935_RS05305	COG2182	Extracellular solute-binding protein
IB935_RS05310	COG0657	acetylesterase activity
IB935_RS05315	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IB935_RS05325	COG1696	Membrane protein involved in D-alanine export
IB935_RS05345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB935_RS05350	COG1126	abc transporter atp-binding protein
IB935_RS05360	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB935_RS05370	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB935_RS05380	COG3711	transcriptional antiterminator
IB935_RS05380	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IB935_RS05390	COG2723	6-phospho-beta-galactosidase activity
IB935_RS05420	COG0157	Belongs to the NadC ModD family
IB935_RS05435	COG2801	Transposase and inactivated derivatives
IB935_RS05440	COG2801	Transposase and inactivated derivatives
IB935_RS05445	COG1187	pseudouridine synthase activity
IB935_RS05455	COG2814	Major facilitator Superfamily
IB935_RS05505	COG4109	DRTGG domain
IB935_RS05510	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IB935_RS05535	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IB935_RS05535	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IB935_RS05545	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IB935_RS05550	COG1956	GAF domain-containing protein
IB935_RS05570	COG0513	Belongs to the DEAD box helicase family
IB935_RS05580	COG0726	polysaccharide deacetylase
IB935_RS05600	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IB935_RS05605	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IB935_RS05640	COG1476	TRANSCRIPTIONal
IB935_RS05655	COG4122	O-methyltransferase activity
IB935_RS05660	COG2223	nitrite transmembrane transporter activity
IB935_RS05675	COG1187	pseudouridine synthase activity
IB935_RS05720	COG2333	competence protein COMEC
IB935_RS05720	COG0658	competence protein
IB935_RS05725	COG1596	polysaccharide export
IB935_RS05725	COG1555	photosystem II stabilization
IB935_RS05730	COG0204	Acyl-transferase
IB935_RS05735	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
IB935_RS05750	COG0513	Belongs to the DEAD box helicase family
IB935_RS05765	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IB935_RS05780	COG2116	formate transmembrane transporter activity
IB935_RS05790	COG1827	regulation of RNA biosynthetic process
IB935_RS05810	COG2217	Heavy metal translocating P-type atpase
IB935_RS05825	COG3177	Filamentation induced by cAMP protein fic
IB935_RS06025	COG2755	lipolytic protein G-D-S-L family
IB935_RS06040	COG0497	DNA recombination
IB935_RS06045	COG1438	arginine binding
IB935_RS06050	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
IB935_RS06075	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IB935_RS06080	COG0415	Belongs to the DNA photolyase family
IB935_RS06090	COG0765	amino acid transport
IB935_RS06095	COG4703	Protein of unknown function (DUF1797)
IB935_RS06100	COG0542	response to heat
IB935_RS06105	COG0494	nUDIX hydrolase
IB935_RS06120	COG3599	regulation of cell shape
IB935_RS06125	COG2302	S4 RNA-binding domain
IB935_RS06140	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IB935_RS06175	COG1217	gtp-binding protein TYPA
IB935_RS06180	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IB935_RS06185	COG1940	carbohydrate kinase activity
IB935_RS06195	COG0783	Belongs to the Dps family
IB935_RS06210	COG4470	Protein conserved in bacteria
IB935_RS06215	COG1609	Transcriptional regulator
IB935_RS06220	COG3480	Lon protease (S16) C-terminal proteolytic domain
IB935_RS06230	COG0742	ribosomal rna small subunit methyltransferase
IB935_RS06240	COG0549	Belongs to the carbamate kinase family
IB935_RS06245	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IB935_RS06250	COG1288	antiporter activity
IB935_RS06260	COG0454	-acetyltransferase
IB935_RS06265	COG2235	arginine
IB935_RS06290	COG2972	Histidine kinase
IB935_RS06325	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB935_RS06455	COG1475	DNA binding
IB935_RS06520	COG3723	Recombinational DNA repair protein, rece pathway
IB935_RS06545	COG3935	DnaD domain protein
IB935_RS06585	COG3561	AntA/AntB antirepressor
IB935_RS06600	COG1396	sequence-specific DNA binding
IB935_RS06625	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IB935_RS06630	COG0785	Cytochrome C biogenesis protein
IB935_RS06635	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IB935_RS06640	COG1518	maintenance of DNA repeat elements
IB935_RS06700	COG1605	Chorismate mutase
IB935_RS06700	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
IB935_RS06720	COG2226	methyltransferase
IB935_RS06730	COG3250	beta-galactosidase activity
IB935_RS06735	COG4753	response regulator
IB935_RS06735	COG2207	Transcriptional regulator
IB935_RS06740	COG2972	Histidine kinase
IB935_RS06750	COG1653	transport
IB935_RS06755	COG0395	ABC-type sugar transport system, permease component
IB935_RS06760	COG1175	transmembrane transport
IB935_RS06765	COG1940	carbohydrate kinase activity
IB935_RS06770	COG2723	6-phospho-beta-galactosidase activity
IB935_RS06775	COG3525	Glycosyl hydrolase, family 20, catalytic domain
IB935_RS06790	COG0383	alpha-mannosidase activity
IB935_RS06885	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
IB935_RS06890	COG1739	Uncharacterized protein family UPF0029
IB935_RS06900	COG1098	S1 RNA binding domain
IB935_RS06910	COG2197	response regulator
IB935_RS06915	COG4585	Histidine kinase
IB935_RS06925	COG2815	serine threonine protein kinase
IB935_RS06925	COG0515	serine threonine protein kinase
IB935_RS06935	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IB935_RS06935	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IB935_RS06945	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IB935_RS06965	COG0583	DNA-binding transcription factor activity
IB935_RS06970	COG0183	Belongs to the thiolase family
IB935_RS06975	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IB935_RS06985	COG1028	Short-chain dehydrogenase reductase Sdr
IB935_RS06990	COG2610	gluconate transmembrane transporter activity
IB935_RS07005	COG0116	Belongs to the methyltransferase superfamily
IB935_RS07030	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB935_RS07035	COG3579	cysteine-type endopeptidase activity
IB935_RS07045	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IB935_RS07050	COG1113	amino acid transport
IB935_RS07055	COG0492	ferredoxin-NADP+ reductase activity
IB935_RS07065	COG1126	abc transporter atp-binding protein
IB935_RS07075	COG0513	Belongs to the DEAD box helicase family
IB935_RS07085	COG0768	penicillin binding
IB935_RS07120	COG1131	(ABC) transporter
IB935_RS07145	COG0446	pyridine nucleotide-disulphide oxidoreductase
IB935_RS07150	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB935_RS07185	COG1755	Isoprenylcysteine carboxyl methyltransferase
IB935_RS07190	COG0656	L-ascorbic acid biosynthetic process
IB935_RS07200	COG1283	sodium-dependent phosphate transmembrane transporter activity
IB935_RS07220	COG0561	phosphatase activity
IB935_RS07225	COG2860	membrane
IB935_RS07275	COG2217	Heavy metal translocating P-type atpase
IB935_RS07305	COG2740	Nucleic-acid-binding protein implicated in transcription termination
IB935_RS07310	COG0195	Participates in both transcription termination and antitermination
IB935_RS07335	COG4473	ABC transporter
IB935_RS07340	COG1131	(ABC) transporter
IB935_RS07345	COG0537	adenosine 5'-monophosphoramidase activity
IB935_RS07355	COG1316	TRANSCRIPTIONal
IB935_RS07365	COG0802	atpase or kinase
IB935_RS07370	COG2252	PERMEase
IB935_RS07375	COG0561	phosphatase activity
IB935_RS07385	COG3715	PTS system
IB935_RS07390	COG3716	PTS system mannose fructose sorbose family IID component
IB935_RS07415	COG0439	Biotin carboxylase
IB935_RS07430	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IB935_RS07435	COG1028	Short-chain dehydrogenase reductase Sdr
IB935_RS07440	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
IB935_RS07465	COG1024	Enoyl-CoA hydratase
IB935_RS07470	COG0484	heat shock protein binding
IB935_RS07500	COG0588	phosphoglycerate mutase activity
IB935_RS07505	COG2261	transglycosylase associated protein
IB935_RS07535	COG1335	isochorismatase
IB935_RS07545	COG0436	Aminotransferase
IB935_RS07555	COG0561	phosphatase activity
IB935_RS07560	COG0252	asparaginase activity
IB935_RS07575	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IB935_RS07580	COG1129	ABC transporter
IB935_RS07595	COG1132	(ABC) transporter
IB935_RS07600	COG4988	ABC transporter
IB935_RS07605	COG1120	ATPase activity
IB935_RS07630	COG1388	LysM domain
IB935_RS07630	COG3942	CHAP domain
IB935_RS07655	COG1482	cell wall glycoprotein biosynthetic process
IB935_RS07660	COG1940	carbohydrate kinase activity
IB935_RS07670	COG1263	PTS System
IB935_RS07670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB935_RS07670	COG2190	(PTS) system
IB935_RS07675	COG1621	beta-fructofuranosidase activity
IB935_RS07680	COG1609	Transcriptional regulator
IB935_RS07700	COG2131	deaminase
IB935_RS07705	COG0006	proline dipeptidase activity
IB935_RS07745	COG1194	a g-specific adenine glycosylase
IB935_RS07750	COG3620	sequence-specific DNA binding
IB935_RS07755	COG3118	belongs to the thioredoxin family
IB935_RS07785	COG0681	Belongs to the peptidase S26 family
IB935_RS07790	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IB935_RS07805	COG1882	Formate acetyltransferase
IB935_RS07810	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
IB935_RS07825	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB935_RS07830	COG2814	Major facilitator Superfamily
IB935_RS07835	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IB935_RS07860	COG0789	Transcriptional regulator
IB935_RS07875	COG2081	HI0933 family
IB935_RS07885	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IB935_RS07890	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
IB935_RS07910	COG0456	acetyltransferase
IB935_RS07915	COG1214	PFAM Peptidase M22, glycoprotease
IB935_RS07930	COG0174	glutamine synthetase
IB935_RS07935	COG0789	Transcriptional regulator
IB935_RS07950	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
IB935_RS08005	COG0668	transmembrane transport
IB935_RS08015	COG4720	Psort location CytoplasmicMembrane, score
IB935_RS08020	COG0351	phosphomethylpyrimidine kinase
IB935_RS08065	COG1929	Belongs to the glycerate kinase type-1 family
IB935_RS08070	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
IB935_RS08095	COG0577	efflux transmembrane transporter activity
IB935_RS08100	COG1136	(ABC) transporter
IB935_RS08105	COG2274	protein secretion by the type I secretion system
IB935_RS08125	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB935_RS08125	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB935_RS08130	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB935_RS08180	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IB935_RS08185	COG1476	TRANSCRIPTIONal
IB935_RS08205	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IB935_RS08215	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IB935_RS08230	COG1045	serine acetyltransferase
IB935_RS08245	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IB935_RS08260	COG3711	transcriptional antiterminator
IB935_RS08285	COG0431	NADPH-dependent FMN reductase
IB935_RS08290	COG1846	Transcriptional regulator
IB935_RS08310	COG4589	Belongs to the CDS family
IB935_RS08320	COG1862	Preprotein translocase
IB935_RS08330	COG1523	belongs to the glycosyl hydrolase 13 family
IB935_RS08340	COG3842	ATPase activity
IB935_RS08385	COG1263	PTS System
IB935_RS08385	COG2190	(PTS) system
IB935_RS08385	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB935_RS08390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IB935_RS08410	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IB935_RS08415	COG0512	Glutamine amidotransferase of anthranilate synthase
IB935_RS08420	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IB935_RS08460	COG0601	transmembrane transport
IB935_RS08470	COG1122	ATPase activity
IB935_RS08490	COG0803	Belongs to the bacterial solute-binding protein 9 family
IB935_RS08515	COG3711	transcriptional antiterminator
IB935_RS08525	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB935_RS08525	COG3942	CHAP domain
IB935_RS08530	COG2205	protein histidine kinase activity
IB935_RS08535	COG0745	RESPONSE REGULATOR receiver
IB935_RS08540	COG0577	efflux transmembrane transporter activity
IB935_RS08545	COG1136	(ABC) transporter
IB935_RS08610	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IB935_RS08625	COG1882	Formate acetyltransferase
IB935_RS08630	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB935_RS08635	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB935_RS08640	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB935_RS08645	COG2390	Transcriptional regulator
IB935_RS08650	COG1349	DNA-binding transcription factor activity
IB935_RS08655	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IB935_RS08670	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB935_RS08680	COG0564	pseudouridine synthase activity
IB935_RS08710	COG0542	response to heat
IB935_RS08715	COG4463	regulation of RNA biosynthetic process
IB935_RS08730	COG0450	alkyl hydroperoxide reductase
IB935_RS08745	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
IB935_RS08755	COG3404	Formiminotransferase-cyclodeaminase
IB935_RS08770	COG0531	amino acid
IB935_RS08800	COG3590	peptidase
IB935_RS08805	COG0366	Alpha amylase catalytic
IB935_RS08810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB935_RS08810	COG1263	PTS System
IB935_RS08815	COG2188	Transcriptional regulator
IB935_RS08820	COG1733	regulation of RNA biosynthetic process
IB935_RS08825	COG2514	catechol 2,3-dioxygenase activity
IB935_RS08835	COG0602	queuosine metabolic process
IB935_RS08855	COG1328	CTP reductase activity
IB935_RS08880	COG1393	Belongs to the ArsC family
IB935_RS08895	COG0519	Catalyzes the synthesis of GMP from XMP
IB935_RS08915	COG0582	viral genome integration into host DNA
IB935_RS08930	COG1396	sequence-specific DNA binding
IB935_RS08935	COG3617	BRO family, N-terminal domain
IB935_RS08995	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB935_RS09000	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB935_RS09005	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB935_RS09085	COG1511	domain protein
IB935_RS09105	COG0305	Participates in initiation and elongation during chromosome replication
IB935_RS09135	COG1760	l-serine dehydratase
IB935_RS09140	COG1760	l-serine dehydratase
IB935_RS09145	COG0741	lytic transglycosylase activity
IB935_RS09150	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IB935_RS09165	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IB935_RS09175	COG0612	Peptidase, M16
IB935_RS09200	COG0516	GMP reductase activity
IB935_RS09200	COG0517	IMP dehydrogenase activity
IB935_RS09210	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB935_RS09215	COG0488	(ABC) transporter
IB935_RS09250	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IB935_RS09255	COG1475	DNA binding