locus-tag	class	description
IB936_RS00010	COG0592	DNA-directed DNA polymerase activity
IB936_RS00020	COG0012	GTP binding
IB936_RS00030	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IB936_RS00035	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IB936_RS00060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IB936_RS00065	COG0531	amino acid
IB936_RS00180	COG3942	CHAP domain
IB936_RS00200	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IB936_RS00210	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IB936_RS00225	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IB936_RS00245	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IB936_RS00265	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IB936_RS00280	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IB936_RS00295	COG1012	belongs to the aldehyde dehydrogenase family
IB936_RS00295	COG1454	alcohol dehydrogenase
IB936_RS00300	COG1064	alcohol dehydrogenase
IB936_RS00305	COG0534	Mate efflux family protein
IB936_RS00415	COG0201	protein transport
IB936_RS00565	COG1121	(ABC) transporter
IB936_RS00570	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IB936_RS00585	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB936_RS00585	COG4499	WXG100 protein secretion system (Wss), protein YukC
IB936_RS00605	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IB936_RS00610	COG1459	type II secretion system
IB936_RS00615	COG4537	Required for transformation and DNA binding
IB936_RS00655	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IB936_RS00660	COG1363	Peptidase, m42
IB936_RS00670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IB936_RS00675	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IB936_RS00685	COG1428	Deoxynucleoside kinase
IB936_RS00690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IB936_RS00750	COG2031	fatty acid transporter
IB936_RS00765	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IB936_RS00780	COG0251	oxidation-reduction process
IB936_RS00795	COG1269	ATP hydrolysis coupled proton transport
IB936_RS00800	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IB936_RS00810	COG1527	subunit (C
IB936_RS00815	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
IB936_RS00850	COG1744	ABC transporter substrate-binding protein PnrA-like
IB936_RS00895	COG0626	cystathionine gamma-synthase activity
IB936_RS00925	COG3623	hexulose-6-phosphate isomerase
IB936_RS00945	COG3448	diguanylate cyclase activity
IB936_RS00945	COG4175	Glycine betaine
IB936_RS00955	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IB936_RS00955	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IB936_RS00985	COG1268	BioY protein
IB936_RS00990	COG1234	tRNA 3'-trailer cleavage
IB936_RS01030	COG0457	Tetratricopeptide repeat
IB936_RS01030	COG0705	Rhomboid family
IB936_RS01050	COG1132	(ABC) transporter
IB936_RS01055	COG1132	(ABC) transporter
IB936_RS01065	COG0756	dUTP diphosphatase activity
IB936_RS01090	COG3290	protein histidine kinase activity
IB936_RS01115	COG1847	R3H domain protein
IB936_RS01135	COG1175	transmembrane transport
IB936_RS01140	COG0395	ABC-type sugar transport system, permease component
IB936_RS01155	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IB936_RS01170	COG0084	hydrolase, TatD family'
IB936_RS01195	COG1564	THIamine pyrophosphokinase
IB936_RS01210	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IB936_RS01250	COG0765	amino acid transport
IB936_RS01270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IB936_RS01280	COG0719	Fe-S assembly protein
IB936_RS01285	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IB936_RS01300	COG1686	Belongs to the peptidase S11 family
IB936_RS01305	COG1686	Belongs to the peptidase S11 family
IB936_RS01310	COG4166	transmembrane transport
IB936_RS01315	COG0601	transmembrane transport
IB936_RS01320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IB936_RS01325	COG0444	Belongs to the ABC transporter superfamily
IB936_RS01335	COG2801	Transposase and inactivated derivatives
IB936_RS01375	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
IB936_RS01380	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IB936_RS01385	COG1534	Rna-binding protein
IB936_RS01395	COG1713	HD superfamily hydrolase involved in NAD metabolism
IB936_RS01405	COG0799	negative regulation of ribosome biogenesis
IB936_RS01410	COG2226	methyltransferase
IB936_RS01425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB936_RS01430	COG1464	Belongs to the NlpA lipoprotein family
IB936_RS01445	COG1114	Component of the transport system for branched-chain amino acids
IB936_RS01455	COG0569	domain protein
IB936_RS01460	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IB936_RS01470	COG1704	LemA family
IB936_RS01485	COG0745	RESPONSE REGULATOR receiver
IB936_RS01505	COG1484	DNA-dependent DNA replication
IB936_RS01515	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IB936_RS01535	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IB936_RS01550	COG1254	Belongs to the acylphosphatase family
IB936_RS01555	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IB936_RS01610	COG1187	pseudouridine synthase activity
IB936_RS01625	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IB936_RS01630	COG0671	phosphoesterase, PA-phosphatase related
IB936_RS01635	COG1242	4 iron, 4 sulfur cluster binding
IB936_RS01640	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
IB936_RS01645	COG1253	flavin adenine dinucleotide binding
IB936_RS01650	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IB936_RS01665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IB936_RS01670	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IB936_RS01675	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IB936_RS01680	COG1120	ATPase activity
IB936_RS01695	COG2244	polysaccharide biosynthetic process
IB936_RS01720	COG0470	DNA polymerase III
IB936_RS01750	COG1393	Belongs to the ArsC family
IB936_RS01755	COG0708	Exodeoxyribonuclease III
IB936_RS01760	COG1304	FMN binding
IB936_RS01830	COG1028	Short-chain dehydrogenase reductase Sdr
IB936_RS01835	COG0673	inositol 2-dehydrogenase activity
IB936_RS01850	COG0494	nUDIX hydrolase
IB936_RS01860	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IB936_RS01950	COG1702	phosphate starvation-inducible protein PhoH
IB936_RS01955	COG1573	uracil-dna glycosylase
IB936_RS01965	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IB936_RS01985	COG2274	protein secretion by the type I secretion system
IB936_RS01990	COG2274	protein secretion by the type I secretion system
IB936_RS01995	COG2274	protein secretion by the type I secretion system
IB936_RS02030	COG2801	Transposase and inactivated derivatives
IB936_RS02035	COG2801	Transposase and inactivated derivatives
IB936_RS02040	COG2801	Transposase and inactivated derivatives
IB936_RS02065	COG2274	protein secretion by the type I secretion system
IB936_RS02145	COG0433	COG0433 Predicted ATPase
IB936_RS02150	COG2814	Major facilitator Superfamily
IB936_RS02165	COG0557	exoribonuclease II activity
IB936_RS02195	COG0463	Glycosyl transferase, family 2
IB936_RS02205	COG0778	Nitroreductase
IB936_RS02210	COG0006	proline dipeptidase activity
IB936_RS02215	COG1609	Transcriptional regulator
IB936_RS02225	COG0438	transferase activity, transferring glycosyl groups
IB936_RS02235	COG4555	ABC transporter
IB936_RS02250	COG2376	Dihydroxyacetone kinase
IB936_RS02260	COG2376	Dihydroxyacetone kinase
IB936_RS02265	COG1461	Dihydroxyacetone kinase
IB936_RS02270	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
IB936_RS02275	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB936_RS02285	COG0183	Belongs to the thiolase family
IB936_RS02300	COG0745	RESPONSE REGULATOR receiver
IB936_RS02305	COG5002	protein histidine kinase activity
IB936_RS02310	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
IB936_RS02320	COG1196	nuclear chromosome segregation
IB936_RS02335	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
IB936_RS02460	COG0561	phosphatase activity
IB936_RS02465	COG0561	phosphatase activity
IB936_RS02470	COG0552	protein localization to endoplasmic reticulum
IB936_RS02475	COG0477	Major facilitator Superfamily
IB936_RS02480	COG3711	transcriptional antiterminator
IB936_RS02485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB936_RS02485	COG1263	PTS System
IB936_RS02485	COG2190	(PTS) system
IB936_RS02495	COG3689	TIGRFAM TIGR03943 family protein
IB936_RS02500	COG0701	Predicted permease
IB936_RS02510	COG2183	response to ionizing radiation
IB936_RS02555	COG0826	peptidase U32
IB936_RS02560	COG4443	Transcriptional Coactivator p15 (PC4)
IB936_RS02610	COG0386	Belongs to the glutathione peroxidase family
IB936_RS02615	COG1164	Oligoendopeptidase f
IB936_RS02625	COG0772	Belongs to the SEDS family
IB936_RS02655	COG1078	dGTPase activity
IB936_RS02670	COG1609	Transcriptional regulator
IB936_RS02680	COG3716	PTS system mannose fructose sorbose family IID component
IB936_RS02685	COG3715	PTS system
IB936_RS02690	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB936_RS02705	COG1028	Short-chain dehydrogenase reductase Sdr
IB936_RS02720	COG0800	Aldolase
IB936_RS02725	COG0546	phosphoglycolate phosphatase activity
IB936_RS02745	COG2884	Cell division ATP-binding protein ftsE
IB936_RS02750	COG2177	Part of the ABC transporter FtsEX involved in
IB936_RS02765	COG1199	ATP-dependent helicase activity
IB936_RS02765	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IB936_RS02770	COG0436	Aminotransferase
IB936_RS02860	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB936_RS02890	COG2188	Transcriptional regulator
IB936_RS02895	COG2222	sugar isomerase
IB936_RS02905	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
IB936_RS02910	COG0716	FMN binding
IB936_RS02920	COG0038	chloride channel
IB936_RS03005	COG1131	(ABC) transporter
IB936_RS03025	COG4708	membrane
IB936_RS03035	COG1597	lipid kinase activity
IB936_RS03120	COG0577	efflux transmembrane transporter activity
IB936_RS03125	COG1136	(ABC) transporter
IB936_RS03130	COG2321	neutral zinc metallopeptidase
IB936_RS03145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB936_RS03155	COG1970	mechanosensitive ion channel activity
IB936_RS03160	COG5433	transposase activity
IB936_RS03165	COG0358	DNA primase activity
IB936_RS03170	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IB936_RS03175	COG2151	metal-sulfur cluster biosynthetic enzyme
IB936_RS03220	COG1216	Glycosyl transferase, family 2
IB936_RS03280	COG1368	sulfuric ester hydrolase activity
IB936_RS03285	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IB936_RS03305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IB936_RS03310	COG0285	dihydrofolate synthase activity
IB936_RS03320	COG1104	cysteine desulfurase activity
IB936_RS03350	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IB936_RS03355	COG0583	DNA-binding transcription factor activity
IB936_RS03365	COG0564	pseudouridine synthase activity
IB936_RS03395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IB936_RS03400	COG1136	(ABC) transporter
IB936_RS03405	COG0577	efflux transmembrane transporter activity
IB936_RS03410	COG0584	glycerophosphoryl diester phosphodiesterase
IB936_RS03420	COG1837	Belongs to the UPF0109 family
IB936_RS03475	COG1349	DNA-binding transcription factor activity
IB936_RS03480	COG1105	Belongs to the carbohydrate kinase PfkB family
IB936_RS03485	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IB936_RS03485	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IB936_RS03485	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IB936_RS03490	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB936_RS03490	COG1388	LysM domain
IB936_RS03495	COG1388	LysM domain
IB936_RS03495	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB936_RS03535	COG0488	(ABC) transporter
IB936_RS03540	COG0242	peptide deformylase activity
IB936_RS03545	COG0737	Belongs to the 5'-nucleotidase family
IB936_RS03550	COG2357	RelA SpoT domain protein
IB936_RS03555	COG0745	RESPONSE REGULATOR receiver
IB936_RS03590	COG3425	synthase
IB936_RS03600	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IB936_RS03660	COG0583	DNA-binding transcription factor activity
IB936_RS03685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB936_RS03690	COG0765	amino acid transport
IB936_RS03710	COG0187	DNA topoisomerase II activity
IB936_RS03720	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IB936_RS03745	COG0539	negative regulation of cytoplasmic translation
IB936_RS03790	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IB936_RS03795	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
IB936_RS03805	COG0300	oxidoreductase activity
IB936_RS03810	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
IB936_RS03810	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IB936_RS03825	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IB936_RS03830	COG2384	SAM-dependent methyltransferase
IB936_RS03840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IB936_RS03845	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
IB936_RS03855	COG1088	dTDP-glucose 4,6-dehydratase activity
IB936_RS03860	COG0582	viral genome integration into host DNA
IB936_RS03995	COG1051	belongs to the nudix hydrolase family
IB936_RS04000	COG0628	permease
IB936_RS04005	COG0457	Tetratricopeptide repeat
IB936_RS04010	COG1293	RNA-binding protein homologous to eukaryotic snRNP
IB936_RS04025	COG1129	ABC transporter
IB936_RS04045	COG0488	(ABC) transporter
IB936_RS04050	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
IB936_RS04055	COG0022	dehydrogenase e1 component
IB936_RS04055	COG0508	dehydrogenase complex catalyzes the overall conversion of
IB936_RS04060	COG0508	dehydrogenase complex catalyzes the overall conversion of
IB936_RS04070	COG5492	domain, Protein
IB936_RS04075	COG0095	Lipoate-protein ligase
IB936_RS04080	COG3442	glutamine amidotransferase
IB936_RS04085	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IB936_RS04090	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IB936_RS04110	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IB936_RS04120	COG0647	UMP catabolic process
IB936_RS04135	COG1518	maintenance of DNA repeat elements
IB936_RS04140	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IB936_RS04185	COG3715	PTS system
IB936_RS04190	COG3716	PTS system mannose fructose sorbose family IID component
IB936_RS04195	COG2972	Histidine kinase
IB936_RS04200	COG4753	response regulator
IB936_RS04200	COG2207	Transcriptional regulator
IB936_RS04210	COG1012	belongs to the aldehyde dehydrogenase family
IB936_RS04225	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IB936_RS04300	COG1131	(ABC) transporter
IB936_RS04315	COG1396	sequence-specific DNA binding
IB936_RS04345	COG0285	dihydrofolate synthase activity
IB936_RS04365	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IB936_RS04380	COG1176	ABC-type spermidine putrescine transport system, permease component I
IB936_RS04385	COG1177	transmembrane transport
IB936_RS04395	COG4565	transcriptional regulatory protein
IB936_RS04400	COG3290	protein histidine kinase activity
IB936_RS04405	COG3493	citrate carrier protein
IB936_RS04420	COG3700	Belongs to the class B bacterial acid phosphatase family
IB936_RS04425	COG0038	chloride channel
IB936_RS04435	COG0628	permease
IB936_RS04445	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
IB936_RS04460	COG1104	cysteine desulfurase activity
IB936_RS04475	COG2357	RelA SpoT domain protein
IB936_RS04485	COG0564	pseudouridine synthase activity
IB936_RS04490	COG0280	phosphate acetyltransferase
IB936_RS04495	COG4221	oxidoreductase activity
IB936_RS04510	COG1174	glycine betaine transport
IB936_RS04525	COG2233	PERMEase
IB936_RS04550	COG2890	protein-(glutamine-N5) methyltransferase activity
IB936_RS04580	COG1132	(ABC) transporter
IB936_RS04585	COG1132	(ABC) transporter
IB936_RS04605	COG3764	Sortase (surface protein transpeptidase)
IB936_RS04610	COG0346	lactoylglutathione lyase activity
IB936_RS04625	COG1272	protein, Hemolysin III
IB936_RS04645	COG0758	DNA mediated transformation
IB936_RS04650	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IB936_RS04695	COG0511	ligase activity, forming carbon-carbon bonds
IB936_RS04700	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IB936_RS04715	COG2851	Citrate transporter
IB936_RS04725	COG0511	ligase activity, forming carbon-carbon bonds
IB936_RS04730	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IB936_RS04760	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IB936_RS04780	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IB936_RS04790	COG2188	Transcriptional regulator
IB936_RS04810	COG0488	(ABC) transporter
IB936_RS04820	COG0352	thiamine-phosphate diphosphorylase activity
IB936_RS04820	COG0351	phosphomethylpyrimidine kinase
IB936_RS04825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IB936_RS04830	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IB936_RS04830	COG1328	CTP reductase activity
IB936_RS04835	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IB936_RS04865	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IB936_RS04875	COG0095	Lipoate-protein ligase
IB936_RS04885	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IB936_RS04890	COG4684	Psort location CytoplasmicMembrane, score
IB936_RS04895	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IB936_RS04900	COG1079	Belongs to the binding-protein-dependent transport system permease family
IB936_RS04905	COG4603	Belongs to the binding-protein-dependent transport system permease family
IB936_RS04910	COG3845	ABC transporter
IB936_RS04915	COG1744	ABC transporter substrate-binding protein PnrA-like
IB936_RS04920	COG0295	cytidine deaminase activity
IB936_RS04925	COG2813	Specifically methylates the guanine in position
IB936_RS04940	COG5002	protein histidine kinase activity
IB936_RS04945	COG0745	RESPONSE REGULATOR receiver
IB936_RS04955	COG0704	Plays a role in the regulation of phosphate uptake
IB936_RS04970	COG0581	inorganic phosphate transmembrane transporter activity
IB936_RS04975	COG0573	inorganic phosphate transmembrane transporter activity
IB936_RS04985	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IB936_RS04985	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
IB936_RS04990	COG0483	inositol monophosphate 1-phosphatase activity
IB936_RS05005	COG0196	riboflavin kinase activity
IB936_RS05035	COG1136	(ABC) transporter
IB936_RS05035	COG4591	ABC-type transport system involved in lipoprotein release permease component
IB936_RS05085	COG1115	amino acid carrier protein
IB936_RS05090	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
IB936_RS05100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB936_RS05105	COG1126	abc transporter atp-binding protein
IB936_RS05110	COG0765	amino acid transport
IB936_RS05115	COG2824	Alkylphosphonate utilization operon protein PhnA
IB936_RS05130	COG0469	pyruvate kinase activity
IB936_RS05145	COG1725	Transcriptional regulator
IB936_RS05150	COG1131	(ABC) transporter
IB936_RS05175	COG0058	SHG alpha-glucan phosphorylase activity
IB936_RS05180	COG1640	4-alpha-glucanotransferase
IB936_RS05185	COG1609	Transcriptional regulator
IB936_RS05190	COG2182	Extracellular solute-binding protein
IB936_RS05195	COG1175	transmembrane transport
IB936_RS05200	COG3833	ABC-type maltose transport systems, permease component
IB936_RS05215	COG3833	ABC-type maltose transport systems, permease component
IB936_RS05220	COG1175	transmembrane transport
IB936_RS05230	COG0366	Alpha amylase catalytic
IB936_RS05235	COG2182	Extracellular solute-binding protein
IB936_RS05240	COG0657	acetylesterase activity
IB936_RS05245	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IB936_RS05255	COG1696	Membrane protein involved in D-alanine export
IB936_RS05275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IB936_RS05280	COG1126	abc transporter atp-binding protein
IB936_RS05290	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB936_RS05300	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB936_RS05310	COG3711	transcriptional antiterminator
IB936_RS05310	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IB936_RS05320	COG2723	6-phospho-beta-galactosidase activity
IB936_RS05350	COG0157	Belongs to the NadC ModD family
IB936_RS05365	COG2801	Transposase and inactivated derivatives
IB936_RS05370	COG2801	Transposase and inactivated derivatives
IB936_RS05375	COG1187	pseudouridine synthase activity
IB936_RS05385	COG2814	Major facilitator Superfamily
IB936_RS05435	COG4109	DRTGG domain
IB936_RS05440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IB936_RS05465	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IB936_RS05465	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IB936_RS05475	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IB936_RS05480	COG1956	GAF domain-containing protein
IB936_RS05500	COG0513	Belongs to the DEAD box helicase family
IB936_RS05510	COG0726	polysaccharide deacetylase
IB936_RS05530	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IB936_RS05535	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IB936_RS05570	COG1476	TRANSCRIPTIONal
IB936_RS05585	COG4122	O-methyltransferase activity
IB936_RS05590	COG2223	nitrite transmembrane transporter activity
IB936_RS05605	COG1187	pseudouridine synthase activity
IB936_RS05650	COG2333	competence protein COMEC
IB936_RS05650	COG0658	competence protein
IB936_RS05655	COG1596	polysaccharide export
IB936_RS05655	COG1555	photosystem II stabilization
IB936_RS05660	COG0204	Acyl-transferase
IB936_RS05665	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
IB936_RS05680	COG0513	Belongs to the DEAD box helicase family
IB936_RS05695	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IB936_RS05710	COG2116	formate transmembrane transporter activity
IB936_RS05720	COG1827	regulation of RNA biosynthetic process
IB936_RS05735	COG2217	Heavy metal translocating P-type atpase
IB936_RS05750	COG3177	Filamentation induced by cAMP protein fic
IB936_RS05950	COG2755	lipolytic protein G-D-S-L family
IB936_RS05965	COG0497	DNA recombination
IB936_RS05970	COG1438	arginine binding
IB936_RS05975	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
IB936_RS06000	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IB936_RS06005	COG0415	Belongs to the DNA photolyase family
IB936_RS06015	COG0765	amino acid transport
IB936_RS06020	COG4703	Protein of unknown function (DUF1797)
IB936_RS06025	COG0542	response to heat
IB936_RS06030	COG0494	nUDIX hydrolase
IB936_RS06045	COG3599	regulation of cell shape
IB936_RS06050	COG2302	S4 RNA-binding domain
IB936_RS06065	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IB936_RS06100	COG1217	gtp-binding protein TYPA
IB936_RS06105	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IB936_RS06110	COG1940	carbohydrate kinase activity
IB936_RS06120	COG0783	Belongs to the Dps family
IB936_RS06135	COG4470	Protein conserved in bacteria
IB936_RS06140	COG1609	Transcriptional regulator
IB936_RS06145	COG3480	Lon protease (S16) C-terminal proteolytic domain
IB936_RS06155	COG0742	ribosomal rna small subunit methyltransferase
IB936_RS06165	COG0549	Belongs to the carbamate kinase family
IB936_RS06170	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IB936_RS06175	COG1288	antiporter activity
IB936_RS06185	COG0454	-acetyltransferase
IB936_RS06190	COG2235	arginine
IB936_RS06215	COG2972	Histidine kinase
IB936_RS06265	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB936_RS06395	COG1475	DNA binding
IB936_RS06465	COG3723	Recombinational DNA repair protein, rece pathway
IB936_RS06490	COG3935	DnaD domain protein
IB936_RS06530	COG3561	AntA/AntB antirepressor
IB936_RS06545	COG1396	sequence-specific DNA binding
IB936_RS06570	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IB936_RS06575	COG0785	Cytochrome C biogenesis protein
IB936_RS06580	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IB936_RS06585	COG1518	maintenance of DNA repeat elements
IB936_RS06645	COG1605	Chorismate mutase
IB936_RS06645	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
IB936_RS06665	COG2226	methyltransferase
IB936_RS06675	COG3250	beta-galactosidase activity
IB936_RS06680	COG2207	Transcriptional regulator
IB936_RS06680	COG4753	response regulator
IB936_RS06685	COG2972	Histidine kinase
IB936_RS06695	COG1653	transport
IB936_RS06700	COG0395	ABC-type sugar transport system, permease component
IB936_RS06705	COG1175	transmembrane transport
IB936_RS06710	COG1940	carbohydrate kinase activity
IB936_RS06715	COG2723	6-phospho-beta-galactosidase activity
IB936_RS06720	COG3525	Glycosyl hydrolase, family 20, catalytic domain
IB936_RS06735	COG0383	alpha-mannosidase activity
IB936_RS06830	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
IB936_RS06835	COG1739	Uncharacterized protein family UPF0029
IB936_RS06845	COG1098	S1 RNA binding domain
IB936_RS06855	COG2197	response regulator
IB936_RS06860	COG4585	Histidine kinase
IB936_RS06870	COG0515	serine threonine protein kinase
IB936_RS06870	COG2815	serine threonine protein kinase
IB936_RS06880	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IB936_RS06880	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IB936_RS06890	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IB936_RS06910	COG0583	DNA-binding transcription factor activity
IB936_RS06915	COG0183	Belongs to the thiolase family
IB936_RS06920	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IB936_RS06930	COG1028	Short-chain dehydrogenase reductase Sdr
IB936_RS06935	COG2610	gluconate transmembrane transporter activity
IB936_RS06950	COG0116	Belongs to the methyltransferase superfamily
IB936_RS06975	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB936_RS06980	COG3579	cysteine-type endopeptidase activity
IB936_RS06990	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IB936_RS06995	COG1113	amino acid transport
IB936_RS07000	COG0492	ferredoxin-NADP+ reductase activity
IB936_RS07010	COG1126	abc transporter atp-binding protein
IB936_RS07020	COG0513	Belongs to the DEAD box helicase family
IB936_RS07030	COG0768	penicillin binding
IB936_RS07065	COG1131	(ABC) transporter
IB936_RS07090	COG0446	pyridine nucleotide-disulphide oxidoreductase
IB936_RS07095	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB936_RS07130	COG1755	Isoprenylcysteine carboxyl methyltransferase
IB936_RS07135	COG0656	L-ascorbic acid biosynthetic process
IB936_RS07145	COG1283	sodium-dependent phosphate transmembrane transporter activity
IB936_RS07165	COG0561	phosphatase activity
IB936_RS07170	COG2860	membrane
IB936_RS07220	COG2217	Heavy metal translocating P-type atpase
IB936_RS07250	COG2740	Nucleic-acid-binding protein implicated in transcription termination
IB936_RS07255	COG0195	Participates in both transcription termination and antitermination
IB936_RS07280	COG4473	ABC transporter
IB936_RS07285	COG1131	(ABC) transporter
IB936_RS07290	COG0537	adenosine 5'-monophosphoramidase activity
IB936_RS07300	COG1316	TRANSCRIPTIONal
IB936_RS07310	COG0802	atpase or kinase
IB936_RS07315	COG2252	PERMEase
IB936_RS07320	COG0561	phosphatase activity
IB936_RS07330	COG3715	PTS system
IB936_RS07335	COG3716	PTS system mannose fructose sorbose family IID component
IB936_RS07360	COG0439	Biotin carboxylase
IB936_RS07375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IB936_RS07380	COG1028	Short-chain dehydrogenase reductase Sdr
IB936_RS07385	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
IB936_RS07410	COG1024	Enoyl-CoA hydratase
IB936_RS07415	COG0484	heat shock protein binding
IB936_RS07445	COG0588	phosphoglycerate mutase activity
IB936_RS07450	COG2261	transglycosylase associated protein
IB936_RS07480	COG1335	isochorismatase
IB936_RS07490	COG0436	Aminotransferase
IB936_RS07500	COG0561	phosphatase activity
IB936_RS07505	COG0252	asparaginase activity
IB936_RS07520	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IB936_RS07525	COG1129	ABC transporter
IB936_RS07540	COG1132	(ABC) transporter
IB936_RS07545	COG4988	ABC transporter
IB936_RS07550	COG1120	ATPase activity
IB936_RS07575	COG3942	CHAP domain
IB936_RS07575	COG1388	LysM domain
IB936_RS07600	COG1482	cell wall glycoprotein biosynthetic process
IB936_RS07605	COG1940	carbohydrate kinase activity
IB936_RS07615	COG1263	PTS System
IB936_RS07615	COG2190	(PTS) system
IB936_RS07615	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB936_RS07620	COG1621	beta-fructofuranosidase activity
IB936_RS07625	COG1609	Transcriptional regulator
IB936_RS07645	COG2131	deaminase
IB936_RS07650	COG0006	proline dipeptidase activity
IB936_RS07690	COG1194	a g-specific adenine glycosylase
IB936_RS07695	COG3620	sequence-specific DNA binding
IB936_RS07700	COG3118	belongs to the thioredoxin family
IB936_RS07730	COG0681	Belongs to the peptidase S26 family
IB936_RS07735	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IB936_RS07750	COG1882	Formate acetyltransferase
IB936_RS07755	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
IB936_RS07770	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IB936_RS07775	COG2814	Major facilitator Superfamily
IB936_RS07780	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IB936_RS07805	COG0789	Transcriptional regulator
IB936_RS07820	COG2081	HI0933 family
IB936_RS07830	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IB936_RS07835	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
IB936_RS07855	COG0456	acetyltransferase
IB936_RS07860	COG1214	PFAM Peptidase M22, glycoprotease
IB936_RS07875	COG0174	glutamine synthetase
IB936_RS07880	COG0789	Transcriptional regulator
IB936_RS07895	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
IB936_RS07950	COG0668	transmembrane transport
IB936_RS07960	COG4720	Psort location CytoplasmicMembrane, score
IB936_RS07965	COG0351	phosphomethylpyrimidine kinase
IB936_RS08010	COG1929	Belongs to the glycerate kinase type-1 family
IB936_RS08015	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
IB936_RS08040	COG0577	efflux transmembrane transporter activity
IB936_RS08045	COG1136	(ABC) transporter
IB936_RS08050	COG2274	protein secretion by the type I secretion system
IB936_RS08070	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB936_RS08070	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB936_RS08075	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB936_RS08125	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IB936_RS08130	COG1476	TRANSCRIPTIONal
IB936_RS08150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IB936_RS08160	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IB936_RS08175	COG1045	serine acetyltransferase
IB936_RS08190	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IB936_RS08205	COG3711	transcriptional antiterminator
IB936_RS08230	COG0431	NADPH-dependent FMN reductase
IB936_RS08235	COG1846	Transcriptional regulator
IB936_RS08255	COG4589	Belongs to the CDS family
IB936_RS08265	COG1862	Preprotein translocase
IB936_RS08275	COG1523	belongs to the glycosyl hydrolase 13 family
IB936_RS08285	COG3842	ATPase activity
IB936_RS08325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB936_RS08325	COG1263	PTS System
IB936_RS08325	COG2190	(PTS) system
IB936_RS08330	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IB936_RS08350	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IB936_RS08355	COG0512	Glutamine amidotransferase of anthranilate synthase
IB936_RS08360	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IB936_RS08400	COG0601	transmembrane transport
IB936_RS08410	COG1122	ATPase activity
IB936_RS08430	COG0803	Belongs to the bacterial solute-binding protein 9 family
IB936_RS08455	COG3711	transcriptional antiterminator
IB936_RS08465	COG3942	CHAP domain
IB936_RS08465	COG1705	Flagellar rod assembly protein muramidase FlgJ
IB936_RS08470	COG2205	protein histidine kinase activity
IB936_RS08475	COG0745	RESPONSE REGULATOR receiver
IB936_RS08480	COG0577	efflux transmembrane transporter activity
IB936_RS08485	COG1136	(ABC) transporter
IB936_RS08550	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IB936_RS08565	COG1882	Formate acetyltransferase
IB936_RS08570	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB936_RS08575	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IB936_RS08580	COG1447	Phosphotransferase system cellobiose-specific component IIA
IB936_RS08585	COG2390	Transcriptional regulator
IB936_RS08590	COG1349	DNA-binding transcription factor activity
IB936_RS08595	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IB936_RS08610	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IB936_RS08620	COG0564	pseudouridine synthase activity
IB936_RS08650	COG0542	response to heat
IB936_RS08655	COG4463	regulation of RNA biosynthetic process
IB936_RS08670	COG0450	alkyl hydroperoxide reductase
IB936_RS08685	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
IB936_RS08695	COG3404	Formiminotransferase-cyclodeaminase
IB936_RS08710	COG0531	amino acid
IB936_RS08740	COG3590	peptidase
IB936_RS08745	COG0366	Alpha amylase catalytic
IB936_RS08750	COG1263	PTS System
IB936_RS08750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IB936_RS08755	COG2188	Transcriptional regulator
IB936_RS08760	COG1733	regulation of RNA biosynthetic process
IB936_RS08765	COG2514	catechol 2,3-dioxygenase activity
IB936_RS08775	COG0602	queuosine metabolic process
IB936_RS08795	COG1328	CTP reductase activity
IB936_RS08820	COG1393	Belongs to the ArsC family
IB936_RS08835	COG0519	Catalyzes the synthesis of GMP from XMP
IB936_RS08855	COG0582	viral genome integration into host DNA
IB936_RS08870	COG1396	sequence-specific DNA binding
IB936_RS08875	COG3617	BRO family, N-terminal domain
IB936_RS08935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB936_RS08940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB936_RS08945	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB936_RS09025	COG1511	domain protein
IB936_RS09045	COG0305	Participates in initiation and elongation during chromosome replication
IB936_RS09075	COG1760	l-serine dehydratase
IB936_RS09080	COG1760	l-serine dehydratase
IB936_RS09085	COG0741	lytic transglycosylase activity
IB936_RS09090	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IB936_RS09105	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IB936_RS09115	COG0612	Peptidase, M16
IB936_RS09140	COG0516	GMP reductase activity
IB936_RS09140	COG0517	IMP dehydrogenase activity
IB936_RS09150	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IB936_RS09155	COG0488	(ABC) transporter
IB936_RS09190	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IB936_RS09195	COG1475	DNA binding