locus-tag class description DB248_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DB248_RS00005 PF00308 Bacterial dnaA protein DB248_RS00010 PF02767 DNA polymerase III beta subunit, central domain DB248_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DB248_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DB248_RS00020 PF01926 50S ribosome-binding GTPase DB248_RS00020 PF06071 Protein of unknown function (DUF933) DB248_RS00025 PF01195 Peptidyl-tRNA hydrolase DB248_RS00030 PF17757 UvrB interaction domain DB248_RS00030 PF03461 TRCF domain DB248_RS00030 PF02559 CarD-like/TRCF domain DB248_RS00030 PF00270 DEAD/DEAH box helicase DB248_RS00030 PF00271 Helicase conserved C-terminal domain DB248_RS00035 PF01479 S4 domain DB248_RS00050 PF01171 PP-loop family DB248_RS00055 PF00156 Phosphoribosyl transferase domain DB248_RS00060 PF01434 Peptidase family M41 DB248_RS00060 PF06480 FtsH Extracellular DB248_RS00060 PF17862 AAA+ lid domain DB248_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) DB248_RS00065 PF13520 Amino acid permease DB248_RS00245 PF01476 LysM domain DB248_RS00245 PF05257 CHAP domain DB248_RS00250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DB248_RS00250 PF14572 Phosphoribosyl synthetase-associated domain DB248_RS00255 PF02565 Recombination protein O C terminal DB248_RS00255 PF11967 Recombination protein O N terminal DB248_RS00260 PF02504 Fatty acid synthesis protein DB248_RS00265 PF00550 Phosphopantetheine attachment site DB248_RS00270 PF01259 SAICAR synthetase DB248_RS00275 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DB248_RS00275 PF00586 AIR synthase related protein, N-terminal domain DB248_RS00275 PF02769 AIR synthase related protein, C-terminal domain DB248_RS00280 PF00156 Phosphoribosyl transferase domain DB248_RS00280 PF13537 Glutamine amidotransferase domain DB248_RS00285 PF02769 AIR synthase related protein, C-terminal domain DB248_RS00285 PF00586 AIR synthase related protein, N-terminal domain DB248_RS00290 PF00551 Formyl transferase DB248_RS00295 PF02142 MGS-like domain DB248_RS00295 PF01808 AICARFT/IMPCHase bienzyme DB248_RS00305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DB248_RS00305 PF02843 Phosphoribosylglycinamide synthetase, C domain DB248_RS00305 PF02844 Phosphoribosylglycinamide synthetase, N domain DB248_RS00310 PF00731 AIR carboxylase DB248_RS00315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DB248_RS00315 PF02222 ATP-grasp domain DB248_RS00325 PF00206 Lyase DB248_RS00325 PF10397 Adenylosuccinate lyase C-terminus DB248_RS00335 PF05496 Holliday junction DNA helicase RuvB P-loop domain DB248_RS00335 PF05491 RuvB C-terminal winged helix domain DB248_RS00335 PF17864 RuvB AAA lid domain DB248_RS00340 PF01451 Low molecular weight phosphotyrosine protein phosphatase DB248_RS00350 PF01757 Acyltransferase family DB248_RS00355 PF00465 Iron-containing alcohol dehydrogenase DB248_RS00355 PF00171 Aldehyde dehydrogenase family DB248_RS00360 PF08240 Alcohol dehydrogenase GroES-like domain DB248_RS00360 PF00107 Zinc-binding dehydrogenase DB248_RS00365 PF01554 MatE DB248_RS00370 PF00338 Ribosomal protein S10p/S20e DB248_RS00375 PF00297 Ribosomal protein L3 DB248_RS00380 PF00573 Ribosomal protein L4/L1 family DB248_RS00385 PF00276 Ribosomal protein L23 DB248_RS00390 PF00181 Ribosomal Proteins L2, RNA binding domain DB248_RS00390 PF03947 Ribosomal Proteins L2, C-terminal domain DB248_RS00395 PF00203 Ribosomal protein S19 DB248_RS00400 PF00237 Ribosomal protein L22p/L17e DB248_RS00405 PF00189 Ribosomal protein S3, C-terminal domain DB248_RS00405 PF07650 KH domain DB248_RS00410 PF00252 Ribosomal protein L16p/L10e DB248_RS00415 PF00831 Ribosomal L29 protein DB248_RS00420 PF00366 Ribosomal protein S17 DB248_RS00425 PF00238 Ribosomal protein L14p/L23e DB248_RS00430 PF00467 KOW motif DB248_RS00430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DB248_RS00435 PF00673 ribosomal L5P family C-terminus DB248_RS00435 PF00281 Ribosomal protein L5 DB248_RS00440 PF00253 Ribosomal protein S14p/S29e DB248_RS00445 PF00410 Ribosomal protein S8 DB248_RS00450 PF00347 Ribosomal protein L6 DB248_RS00455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DB248_RS00460 PF03719 Ribosomal protein S5, C-terminal domain DB248_RS00460 PF00333 Ribosomal protein S5, N-terminal domain DB248_RS00465 PF00327 Ribosomal protein L30p/L7e DB248_RS00470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DB248_RS00475 PF00344 SecY translocase DB248_RS00485 PF01176 Translation initiation factor 1A / IF-1 DB248_RS00490 PF00444 Ribosomal protein L36 DB248_RS00495 PF00416 Ribosomal protein S13/S18 DB248_RS00500 PF00411 Ribosomal protein S11 DB248_RS00505 PF01000 RNA polymerase Rpb3/RpoA insert domain DB248_RS00505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DB248_RS00505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DB248_RS00510 PF01196 Ribosomal protein L17 DB248_RS00600 PF08544 GHMP kinases C terminal DB248_RS00600 PF00288 GHMP kinases N terminal domain DB248_RS00610 PF08544 GHMP kinases C terminal DB248_RS00610 PF00288 GHMP kinases N terminal domain DB248_RS00615 PF01047 MarR family DB248_RS00620 PF00005 ABC transporter DB248_RS00625 PF00950 ABC 3 transport family DB248_RS00635 PF01479 S4 domain DB248_RS00635 PF00579 tRNA synthetases class I (W and Y) DB248_RS00640 PF00905 Penicillin binding protein transpeptidase domain DB248_RS00640 PF00912 Transglycosylase DB248_RS00645 PF10385 RNA polymerase beta subunit external 1 domain DB248_RS00645 PF04563 RNA polymerase beta subunit DB248_RS00645 PF04565 RNA polymerase Rpb2, domain 3 DB248_RS00645 PF04561 RNA polymerase Rpb2, domain 2 DB248_RS00645 PF00562 RNA polymerase Rpb2, domain 6 DB248_RS00645 PF04560 RNA polymerase Rpb2, domain 7 DB248_RS00650 PF04997 RNA polymerase Rpb1, domain 1 DB248_RS00650 PF00623 RNA polymerase Rpb1, domain 2 DB248_RS00650 PF04998 RNA polymerase Rpb1, domain 5 DB248_RS00650 PF04983 RNA polymerase Rpb1, domain 3 DB248_RS00650 PF05000 RNA polymerase Rpb1, domain 4 DB248_RS00660 PF00437 Type II/IV secretion system protein DB248_RS00665 PF00482 Type II secretion system (T2SS), protein F DB248_RS00670 PF07963 Prokaryotic N-terminal methylation motif DB248_RS00700 PF00871 Acetokinase family DB248_RS00710 PF14748 Pyrroline-5-carboxylate reductase dimerisation DB248_RS00710 PF03807 NADP oxidoreductase coenzyme F420-dependent DB248_RS00715 PF05343 M42 glutamyl aminopeptidase DB248_RS00730 PF00085 Thioredoxin DB248_RS00735 PF14794 Domain of unknown function (DUF4479) DB248_RS00735 PF01588 Putative tRNA binding domain DB248_RS00740 PF00436 Single-strand binding protein family DB248_RS00745 PF01712 Deoxynucleoside kinase DB248_RS00750 PF01207 Dihydrouridine synthase (Dus) DB248_RS00755 PF01430 Hsp33 protein DB248_RS00770 PF17802 Prealbumin-like fold domain DB248_RS00770 PF08341 Thioester domain DB248_RS00780 PF12892 Spy0128-like isopeptide containing domain DB248_RS00785 PF04203 Sortase domain DB248_RS00795 PF13005 zinc-finger binding domain of transposase IS66 DB248_RS00795 PF13817 IS66 C-terminal element DB248_RS00795 PF03050 Transposase IS66 family DB248_RS00795 PF13007 Transposase C of IS166 homeodomain DB248_RS00825 PF02667 Short chain fatty acid transporter DB248_RS00835 PF00108 Thiolase, N-terminal domain DB248_RS00835 PF02803 Thiolase, C-terminal domain DB248_RS00840 PF01144 Coenzyme A transferase DB248_RS00845 PF01144 Coenzyme A transferase DB248_RS00855 PF01042 Endoribonuclease L-PSP DB248_RS00870 PF01496 V-type ATPase 116kDa subunit family DB248_RS00875 PF00137 ATP synthase subunit C DB248_RS00885 PF01992 ATP synthase (C/AC39) subunit DB248_RS00890 PF01990 ATP synthase (F/14-kDa) subunit DB248_RS00895 PF16886 ATPsynthase alpha/beta subunit N-term extension DB248_RS00895 PF02874 ATP synthase alpha/beta family, beta-barrel domain DB248_RS00895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB248_RS00900 PF02874 ATP synthase alpha/beta family, beta-barrel domain DB248_RS00900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB248_RS00905 PF01813 ATP synthase subunit D DB248_RS00920 PF00709 Adenylosuccinate synthetase DB248_RS00925 PF02608 ABC transporter substrate-binding protein PnrA-like DB248_RS00930 PF02357 Transcription termination factor nusG DB248_RS00930 PF00467 KOW motif DB248_RS00970 PF01053 Cys/Met metabolism PLP-dependent enzyme DB248_RS00975 PF13603 Leucyl-tRNA synthetase, Domain 2 DB248_RS00975 PF08264 Anticodon-binding domain of tRNA DB248_RS00975 PF09334 tRNA synthetases class I (M) DB248_RS00975 PF00133 tRNA synthetases class I (I, L, M and V) DB248_RS00980 PF03611 PTS system sugar-specific permease component DB248_RS00985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS00990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DB248_RS00995 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DB248_RS01000 PF01261 Xylose isomerase-like TIM barrel DB248_RS01005 PF00596 Class II Aldolase and Adducin N-terminal domain DB248_RS01025 PF00571 CBS domain DB248_RS01025 PF00005 ABC transporter DB248_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01035 PF01367 5'-3' exonuclease, C-terminal SAM fold DB248_RS01035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DB248_RS01035 PF00476 DNA polymerase family A DB248_RS01045 PF01475 Ferric uptake regulator family DB248_RS01055 PF01507 Phosphoadenosine phosphosulfate reductase family DB248_RS01055 PF11922 Domain of unknown function (DUF3440) DB248_RS01060 PF02195 ParB-like nuclease domain DB248_RS01085 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DB248_RS01085 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DB248_RS01100 PF01702 Queuine tRNA-ribosyltransferase DB248_RS01110 PF02632 BioY family DB248_RS01115 PF12706 Beta-lactamase superfamily domain DB248_RS01120 PF14437 MafB19-like deaminase DB248_RS01135 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DB248_RS01135 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DB248_RS01140 PF00342 Phosphoglucose isomerase DB248_RS01150 PF13808 DDE_Tnp_1-associated DB248_RS01150 PF01609 Transposase DDE domain DB248_RS01160 PF01694 Rhomboid family DB248_RS01165 PF00483 Nucleotidyl transferase DB248_RS01170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DB248_RS01170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DB248_RS01180 PF00664 ABC transporter transmembrane region DB248_RS01180 PF00005 ABC transporter DB248_RS01185 PF00005 ABC transporter DB248_RS01185 PF00664 ABC transporter transmembrane region DB248_RS01190 PF02677 Epoxyqueuosine reductase QueH DB248_RS01195 PF00692 dUTPase DB248_RS01200 PF18073 Rubredoxin metal binding domain DB248_RS01205 PF00484 Carbonic anhydrase DB248_RS01210 PF01987 Mitochondrial biogenesis AIM24 DB248_RS01215 PF00749 tRNA synthetases class I (E and Q), catalytic domain DB248_RS01220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DB248_RS01220 PF17203 Single cache domain 3 DB248_RS01220 PF00989 PAS fold DB248_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS01235 PF00825 Ribonuclease P DB248_RS01240 PF02096 60Kd inner membrane protein DB248_RS01245 PF14804 Jag N-terminus DB248_RS01245 PF01424 R3H domain DB248_RS01250 PF00468 Ribosomal protein L34 DB248_RS01255 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DB248_RS01265 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01280 PF00701 Dihydrodipicolinate synthetase family DB248_RS01285 PF00480 ROK family DB248_RS01295 PF01026 TatD related DNase DB248_RS01300 PF13331 Domain of unknown function (DUF4093) DB248_RS01305 PF00398 Ribosomal RNA adenine dimethylase DB248_RS01310 PF03193 RsgA GTPase DB248_RS01310 PF16745 RsgA N-terminal domain DB248_RS01315 PF00834 Ribulose-phosphate 3 epimerase family DB248_RS01320 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DB248_RS01320 PF04263 Thiamin pyrophosphokinase, catalytic domain DB248_RS01325 PF02646 RmuC family DB248_RS01330 PF01966 HD domain DB248_RS01335 PF00156 Phosphoribosyl transferase domain DB248_RS01335 PF09182 Bacterial purine repressor, N-terminal DB248_RS01345 PF00164 Ribosomal protein S12/S23 DB248_RS01350 PF00177 Ribosomal protein S7p/S5e DB248_RS01355 PF03144 Elongation factor Tu domain 2 DB248_RS01355 PF03764 Elongation factor G, domain IV DB248_RS01355 PF14492 Elongation Factor G, domain II DB248_RS01355 PF00679 Elongation factor G C-terminus DB248_RS01355 PF00009 Elongation factor Tu GTP binding domain DB248_RS01360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DB248_RS01360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DB248_RS01370 PF00005 ABC transporter DB248_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01385 PF02673 Bacitracin resistance protein BacA DB248_RS01390 PF05389 Negative regulator of genetic competence (MecA) DB248_RS01395 PF00953 Glycosyl transferase family 4 DB248_RS01400 PF00005 ABC transporter DB248_RS01405 PF01458 Uncharacterized protein family (UPF0051) DB248_RS01410 PF00266 Aminotransferase class-V DB248_RS01415 PF01592 NifU-like N terminal domain DB248_RS01420 PF01458 Uncharacterized protein family (UPF0051) DB248_RS01425 PF00768 D-alanyl-D-alanine carboxypeptidase DB248_RS01425 PF07943 Penicillin-binding protein 5, C-terminal domain DB248_RS01430 PF07943 Penicillin-binding protein 5, C-terminal domain DB248_RS01430 PF00768 D-alanyl-D-alanine carboxypeptidase DB248_RS01435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DB248_RS01440 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01445 PF12911 N-terminal TM domain of oligopeptide transport permease C DB248_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DB248_RS01450 PF00005 ABC transporter DB248_RS01455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DB248_RS01455 PF00005 ABC transporter DB248_RS01460 PF13276 HTH-like domain DB248_RS01460 PF13333 Integrase core domain DB248_RS01460 PF00665 Integrase core domain DB248_RS01515 PF01926 50S ribosome-binding GTPase DB248_RS01520 PF01985 CRS1 / YhbY (CRM) domain DB248_RS01525 PF01467 Cytidylyltransferase-like DB248_RS01530 PF01966 HD domain DB248_RS01540 PF13649 Methyltransferase domain DB248_RS01545 PF05636 HIGH Nucleotidyl Transferase DB248_RS01555 PF01709 Transcriptional regulator DB248_RS01560 PF00497 Bacterial extracellular solute-binding proteins, family 3 DB248_RS01565 PF03180 NLPA lipoprotein DB248_RS01570 PF00005 ABC transporter DB248_RS01570 PF09383 NIL domain DB248_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS01580 PF05525 Branched-chain amino acid transport protein DB248_RS01585 PF00375 Sodium:dicarboxylate symporter family DB248_RS01590 PF02080 TrkA-C domain DB248_RS01590 PF02254 TrkA-N domain DB248_RS01595 PF02386 Cation transport protein DB248_RS01600 PF02527 rRNA small subunit methyltransferase G DB248_RS01605 PF04011 LemA family DB248_RS01610 PF01435 Peptidase family M48 DB248_RS01620 PF00072 Response regulator receiver domain DB248_RS01620 PF00486 Transcriptional regulatory protein, C terminal DB248_RS01630 PF03477 ATP cone domain DB248_RS01640 PF01695 IstB-like ATP binding protein DB248_RS01640 PF07319 Primosomal protein DnaI N-terminus DB248_RS01645 PF01926 50S ribosome-binding GTPase DB248_RS01645 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DB248_RS01650 PF00271 Helicase conserved C-terminal domain DB248_RS01650 PF12419 SNF2 Helicase protein DB248_RS01650 PF00176 SNF2 family N-terminal domain DB248_RS01660 PF02875 Mur ligase family, glutamate ligase domain DB248_RS01660 PF01225 Mur ligase family, catalytic domain DB248_RS01660 PF08245 Mur ligase middle domain DB248_RS01670 PF02618 YceG-like family DB248_RS01675 PF03449 Transcription elongation factor, N-terminal DB248_RS01675 PF01272 Transcription elongation factor, GreA/GreB, C-term DB248_RS01680 PF02096 60Kd inner membrane protein DB248_RS01685 PF00708 Acylphosphatase DB248_RS01700 PF08032 RNA 2'-O ribose methyltransferase substrate binding DB248_RS01700 PF00588 SpoU rRNA Methylase family DB248_RS01710 PF01027 Inhibitor of apoptosis-promoting Bax1 DB248_RS01715 PF03672 Uncharacterised protein family (UPF0154) DB248_RS01720 PF01177 Asp/Glu/Hydantoin racemase DB248_RS01725 PF01725 Ham1 family DB248_RS01740 PF00589 Phage integrase family DB248_RS01745 PF02616 Segregation and condensation protein ScpA DB248_RS01750 PF04079 Segregation and condensation complex subunit ScpB DB248_RS01755 PF00849 RNA pseudouridylate synthase DB248_RS01755 PF01479 S4 domain DB248_RS01760 PF01809 Putative membrane protein insertion efficiency factor DB248_RS01765 PF00588 SpoU rRNA Methylase family DB248_RS01770 PF12822 ECF transporter, substrate-specific component DB248_RS01775 PF01569 PAP2 superfamily DB248_RS01780 PF16199 Radical_SAM C-terminal domain DB248_RS01780 PF04055 Radical SAM superfamily DB248_RS01785 PF06962 Putative rRNA methylase DB248_RS01790 PF03471 Transporter associated domain DB248_RS01790 PF00571 CBS domain DB248_RS01790 PF01595 Cyclin M transmembrane N-terminal domain DB248_RS01795 PF04055 Radical SAM superfamily DB248_RS01800 PF02833 DHHA2 domain DB248_RS01800 PF01368 DHH family DB248_RS01810 PF01032 FecCD transport family DB248_RS01815 PF01032 FecCD transport family DB248_RS01820 PF01497 Periplasmic binding protein DB248_RS01825 PF00005 ABC transporter DB248_RS01830 PF02875 Mur ligase family, glutamate ligase domain DB248_RS01830 PF08245 Mur ligase middle domain DB248_RS01835 PF14667 Polysaccharide biosynthesis C-terminal domain DB248_RS01835 PF01943 Polysaccharide biosynthesis protein DB248_RS01850 PF00574 Clp protease DB248_RS01860 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DB248_RS01865 PF02223 Thymidylate kinase DB248_RS01870 PF09115 DNA polymerase III, delta subunit, C terminal DB248_RS01880 PF06156 Initiation control protein YabA DB248_RS01885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB248_RS01895 PF03932 CutC family DB248_RS01900 PF03960 ArsC family DB248_RS01905 PF03372 Endonuclease/Exonuclease/phosphatase family DB248_RS01915 PF01070 FMN-dependent dehydrogenase DB248_RS01920 PF00746 LPXTG cell wall anchor motif DB248_RS01920 PF06280 Fn3-like domain DB248_RS01920 PF02225 PA domain DB248_RS01920 PF00082 Subtilase family DB248_RS01935 PF09334 tRNA synthetases class I (M) DB248_RS01935 PF01588 Putative tRNA binding domain DB248_RS01940 PF00268 Ribonucleotide reductase, small chain DB248_RS01945 PF07972 NrdI Flavodoxin like DB248_RS01950 PF02867 Ribonucleotide reductase, barrel domain DB248_RS01950 PF08343 Ribonucleotide reductase N-terminal DB248_RS01950 PF00317 Ribonucleotide reductase, all-alpha domain DB248_RS01960 PF03496 ADP-ribosyltransferase exoenzyme DB248_RS01990 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DB248_RS01990 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DB248_RS02010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DB248_RS02010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DB248_RS02015 PF07690 Major Facilitator Superfamily DB248_RS02020 PF12804 MobA-like NTP transferase domain DB248_RS02020 PF00132 Bacterial transferase hexapeptide (six repeats) DB248_RS02025 PF00293 NUDIX domain DB248_RS02035 PF01048 Phosphorylase superfamily DB248_RS02050 PF01297 Zinc-uptake complex component A periplasmic DB248_RS02055 PF00005 ABC transporter DB248_RS02060 PF00950 ABC 3 transport family DB248_RS02065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DB248_RS02070 PF01580 FtsK/SpoIIIE family DB248_RS02070 PF17854 FtsK alpha domain DB248_RS02070 PF09397 Ftsk gamma domain DB248_RS02080 PF00298 Ribosomal protein L11, RNA binding domain DB248_RS02080 PF03946 Ribosomal protein L11, N-terminal domain DB248_RS02085 PF00687 Ribosomal protein L1p/L10e family DB248_RS02090 PF00696 Amino acid kinase family DB248_RS02095 PF01765 Ribosome recycling factor DB248_RS02105 PF01625 Peptide methionine sulfoxide reductase DB248_RS02110 PF06855 YozE SAM-like fold DB248_RS02120 PF06100 MCRA family DB248_RS02125 PF02562 PhoH-like protein DB248_RS02130 PF03167 Uracil DNA glycosylase superfamily DB248_RS02135 PF02130 Uncharacterized protein family UPF0054 DB248_RS02140 PF01219 Prokaryotic diacylglycerol kinase DB248_RS02145 PF01926 50S ribosome-binding GTPase DB248_RS02145 PF07650 KH domain DB248_RS02150 PF13344 Haloacid dehalogenase-like hydrolase DB248_RS02150 PF00293 NUDIX domain DB248_RS02220 PF06827 Zinc finger found in FPG and IleRS DB248_RS02220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DB248_RS02220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DB248_RS02225 PF01121 Dephospho-CoA kinase DB248_RS02230 PF05872 Bacterial protein of unknown function (DUF853) DB248_RS02235 PF00083 Sugar (and other) transporter DB248_RS02235 PF07690 Major Facilitator Superfamily DB248_RS02240 PF00471 Ribosomal protein L33 DB248_RS02250 PF17876 Cold shock domain DB248_RS02250 PF08206 Ribonuclease B OB domain DB248_RS02250 PF00773 RNB domain DB248_RS02250 PF00575 S1 RNA binding domain DB248_RS02255 PF01668 SmpB protein DB248_RS02265 PF01470 Pyroglutamyl peptidase DB248_RS02280 PF00535 Glycosyl transferase family 2 DB248_RS02285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DB248_RS02290 PF00881 Nitroreductase family DB248_RS02295 PF01321 Creatinase/Prolidase N-terminal domain DB248_RS02295 PF00557 Metallopeptidase family M24 DB248_RS02300 PF00356 Bacterial regulatory proteins, lacI family DB248_RS02305 PF00534 Glycosyl transferases group 1 DB248_RS02305 PF13439 Glycosyltransferase Family 4 DB248_RS02310 PF13439 Glycosyltransferase Family 4 DB248_RS02310 PF00534 Glycosyl transferases group 1 DB248_RS02315 PF02824 TGS domain DB248_RS02315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DB248_RS02315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DB248_RS02315 PF03129 Anticodon binding domain DB248_RS02320 PF00005 ABC transporter DB248_RS02335 PF00108 Thiolase, N-terminal domain DB248_RS02335 PF02803 Thiolase, C-terminal domain DB248_RS02350 PF00486 Transcriptional regulatory protein, C terminal DB248_RS02350 PF00072 Response regulator receiver domain DB248_RS02355 PF13426 PAS domain DB248_RS02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS02355 PF00512 His Kinase A (phospho-acceptor) domain DB248_RS02355 PF00672 HAMP domain DB248_RS02360 PF00753 Metallo-beta-lactamase superfamily DB248_RS02365 PF14622 Ribonuclease-III-like DB248_RS02365 PF00035 Double-stranded RNA binding motif DB248_RS02370 PF06470 SMC proteins Flexible Hinge Domain DB248_RS02370 PF02463 RecF/RecN/SMC N terminal domain DB248_RS02380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DB248_RS02380 PF08501 Shikimate dehydrogenase substrate binding domain DB248_RS02400 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) DB248_RS02420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DB248_RS02420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DB248_RS02420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DB248_RS02470 PF04860 Phage portal protein DB248_RS02485 PF00152 tRNA synthetases class II (D, K and N) DB248_RS02485 PF01336 OB-fold nucleic acid binding domain DB248_RS02490 PF02655 ATP-grasp domain DB248_RS02490 PF00206 Lyase DB248_RS02495 PF17676 LD-carboxypeptidase C-terminal domain DB248_RS02495 PF02016 LD-carboxypeptidase N-terminal domain DB248_RS02525 PF00448 SRP54-type protein, GTPase domain DB248_RS02525 PF02881 SRP54-type protein, helical bundle domain DB248_RS02530 PF07690 Major Facilitator Superfamily DB248_RS02535 PF00874 PRD domain DB248_RS02535 PF03123 CAT RNA binding domain DB248_RS02540 PF02378 Phosphotransferase system, EIIC DB248_RS02540 PF00367 phosphotransferase system, EIIB DB248_RS02540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DB248_RS02545 PF00232 Glycosyl hydrolase family 1 DB248_RS02550 PF09323 Domain of unknown function (DUF1980) DB248_RS02555 PF03773 Predicted permease DB248_RS02565 PF16921 Tex protein YqgF-like domain DB248_RS02565 PF17674 HHH domain DB248_RS02565 PF00575 S1 RNA binding domain DB248_RS02565 PF09371 Tex-like protein N-terminal domain DB248_RS02570 PF10263 SprT-like family DB248_RS02580 PF07475 HPr Serine kinase C-terminal domain DB248_RS02580 PF02603 HPr Serine kinase N terminus DB248_RS02585 PF01790 Prolipoprotein diacylglyceryl transferase DB248_RS02595 PF12732 YtxH-like protein DB248_RS02610 PF16325 Peptidase family U32 C-terminal domain DB248_RS02610 PF01136 Peptidase family U32 DB248_RS02615 PF02229 Transcriptional Coactivator p15 (PC4) DB248_RS02620 PF00152 tRNA synthetases class II (D, K and N) DB248_RS02620 PF01336 OB-fold nucleic acid binding domain DB248_RS02640 PF09515 Thiamine transporter protein (Thia_YuaJ) DB248_RS02660 PF00255 Glutathione peroxidase DB248_RS02665 PF01432 Peptidase family M3 DB248_RS02665 PF08439 Oligopeptidase F DB248_RS02670 PF00311 Phosphoenolpyruvate carboxylase DB248_RS02675 PF01098 Cell cycle protein DB248_RS02680 PF00009 Elongation factor Tu GTP binding domain DB248_RS02680 PF03144 Elongation factor Tu domain 2 DB248_RS02680 PF03143 Elongation factor Tu C-terminal domain DB248_RS02685 PF00121 Triosephosphate isomerase DB248_RS02710 PF01966 HD domain DB248_RS02720 PF00690 Cation transporter/ATPase, N-terminus DB248_RS02720 PF00689 Cation transporting ATPase, C-terminus DB248_RS02725 PF00356 Bacterial regulatory proteins, lacI family DB248_RS02735 PF03613 PTS system mannose/fructose/sorbose family IID component DB248_RS02740 PF03609 PTS system sorbose-specific iic component DB248_RS02745 PF03830 PTS system sorbose subfamily IIB component DB248_RS02750 PF07470 Glycosyl Hydrolase Family 88 DB248_RS02775 PF01081 KDPG and KHG aldolase DB248_RS02780 PF13419 Haloacid dehalogenase-like hydrolase DB248_RS02785 PF08331 Domain of unknown function (DUF1730) DB248_RS02795 PF00005 ABC transporter DB248_RS02800 PF18075 FtsX extracellular domain DB248_RS02800 PF02687 FtsX-like permease family DB248_RS02805 PF00753 Metallo-beta-lactamase superfamily DB248_RS02810 PF00106 short chain dehydrogenase DB248_RS02820 PF13307 Helicase C-terminal domain DB248_RS02820 PF04851 Type III restriction enzyme, res subunit DB248_RS02820 PF00929 Exonuclease DB248_RS02825 PF00155 Aminotransferase class I and II DB248_RS02830 PF01336 OB-fold nucleic acid binding domain DB248_RS02830 PF00152 tRNA synthetases class II (D, K and N) DB248_RS02835 PF03668 P-loop ATPase protein family DB248_RS02840 PF01933 Uncharacterised protein family UPF0052 DB248_RS02845 PF14527 WhiA LAGLIDADG-like domain DB248_RS02845 PF10298 WhiA N-terminal LAGLIDADG-like domain DB248_RS02845 PF02650 WhiA C-terminal HTH domain DB248_RS02850 PF02796 Helix-turn-helix domain of resolvase DB248_RS02850 PF00239 Resolvase, N terminal domain DB248_RS02860 PF01381 Helix-turn-helix DB248_RS02930 PF03837 RecT family DB248_RS03000 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DB248_RS03045 PF00574 Clp protease DB248_RS03130 PF08460 Bacterial SH3 domain DB248_RS03130 PF05257 CHAP domain DB248_RS03130 PF01520 N-acetylmuramoyl-L-alanine amidase DB248_RS03160 PF03577 Peptidase family C69 DB248_RS03165 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DB248_RS03165 PF01297 Zinc-uptake complex component A periplasmic DB248_RS03170 PF07702 UTRA domain DB248_RS03170 PF00392 Bacterial regulatory proteins, gntR family DB248_RS03175 PF01380 SIS domain DB248_RS03180 PF01197 Ribosomal protein L31 DB248_RS03185 PF02272 DHHA1 domain DB248_RS03185 PF01368 DHH family DB248_RS03190 PF00258 Flavodoxin DB248_RS03200 PF00654 Voltage gated chloride channel DB248_RS03205 PF01245 Ribosomal protein L19 DB248_RS03225 PF01751 Toprim domain DB248_RS03225 PF00204 DNA gyrase B DB248_RS03225 PF00986 DNA gyrase B subunit, carboxyl terminus DB248_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS03230 PF06160 Septation ring formation regulator, EzrA DB248_RS03240 PF00113 Enolase, C-terminal TIM barrel domain DB248_RS03240 PF03952 Enolase, N-terminal domain DB248_RS03295 PF00005 ABC transporter DB248_RS03320 PF06177 QueT transporter DB248_RS03325 PF00533 BRCA1 C Terminus (BRCT) domain DB248_RS03325 PF03120 NAD-dependent DNA ligase OB-fold domain DB248_RS03325 PF12826 Helix-hairpin-helix motif DB248_RS03325 PF01653 NAD-dependent DNA ligase adenylation domain DB248_RS03325 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DB248_RS03330 PF00781 Diacylglycerol kinase catalytic domain DB248_RS03335 PF00137 ATP synthase subunit C DB248_RS03340 PF00119 ATP synthase A chain DB248_RS03345 PF00430 ATP synthase B/B' CF(0) DB248_RS03350 PF00213 ATP synthase delta (OSCP) subunit DB248_RS03355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB248_RS03355 PF02874 ATP synthase alpha/beta family, beta-barrel domain DB248_RS03355 PF00306 ATP synthase alpha/beta chain, C terminal domain DB248_RS03360 PF00231 ATP synthase DB248_RS03365 PF02874 ATP synthase alpha/beta family, beta-barrel domain DB248_RS03365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB248_RS03370 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DB248_RS03370 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DB248_RS03380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DB248_RS03390 PF01223 DNA/RNA non-specific endonuclease DB248_RS03395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DB248_RS03395 PF01409 tRNA synthetases class II core domain (F) DB248_RS03400 PF03484 tRNA synthetase B5 domain DB248_RS03400 PF03147 Ferredoxin-fold anticodon binding domain DB248_RS03400 PF03483 B3/4 domain DB248_RS03400 PF01588 Putative tRNA binding domain DB248_RS03400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DB248_RS03415 PF02687 FtsX-like permease family DB248_RS03420 PF00005 ABC transporter DB248_RS03425 PF04228 Putative neutral zinc metallopeptidase DB248_RS03430 PF12705 PD-(D/E)XK nuclease superfamily DB248_RS03435 PF13361 UvrD-like helicase C-terminal domain DB248_RS03435 PF00580 UvrD/REP helicase N-terminal domain DB248_RS03435 PF12705 PD-(D/E)XK nuclease superfamily DB248_RS03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 DB248_RS03445 PF01165 Ribosomal protein S21 DB248_RS03450 PF01741 Large-conductance mechanosensitive channel, MscL DB248_RS03455 PF01807 CHC2 zinc finger DB248_RS03455 PF10410 DnaB-helicase binding domain of primase DB248_RS03455 PF08275 DNA primase catalytic core, N-terminal domain DB248_RS03460 PF00140 Sigma-70 factor, region 1.2 DB248_RS03460 PF04539 Sigma-70 region 3 DB248_RS03460 PF04542 Sigma-70 region 2 DB248_RS03460 PF03979 Sigma-70 factor, region 1.1 DB248_RS03460 PF04545 Sigma-70, region 4 DB248_RS03465 PF01883 Iron-sulfur cluster assembly protein DB248_RS03470 PF04321 RmlD substrate binding domain DB248_RS03480 PF02709 N-terminal domain of galactosyltransferase DB248_RS03480 PF00535 Glycosyl transferase family 2 DB248_RS03490 PF00005 ABC transporter DB248_RS03495 PF00535 Glycosyl transferase family 2 DB248_RS03510 PF00535 Glycosyl transferase family 2 DB248_RS03530 PF01546 Peptidase family M20/M25/M40 DB248_RS03530 PF07687 Peptidase dimerisation domain DB248_RS03550 PF02224 Cytidylate kinase DB248_RS03555 PF00707 Translation initiation factor IF-3, C-terminal domain DB248_RS03555 PF05198 Translation initiation factor IF-3, N-terminal domain DB248_RS03560 PF01632 Ribosomal protein L35 DB248_RS03565 PF00453 Ribosomal protein L20 DB248_RS03570 PF00884 Sulfatase DB248_RS03575 PF10672 S-adenosylmethionine-dependent methyltransferase DB248_RS03575 PF17785 PUA-like domain DB248_RS03580 PF01487 Type I 3-dehydroquinase DB248_RS03585 PF01264 Chorismate synthase DB248_RS03590 PF06133 Control of competence regulator ComK, YlbF/YmcA DB248_RS03595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB248_RS03595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS03600 PF02875 Mur ligase family, glutamate ligase domain DB248_RS03600 PF08245 Mur ligase middle domain DB248_RS03610 PF00266 Aminotransferase class-V DB248_RS03615 PF02568 Thiamine biosynthesis protein (ThiI) DB248_RS03615 PF02926 THUMP domain DB248_RS03620 PF09587 Bacterial capsule synthesis protein PGA_cap DB248_RS03625 PF00829 Ribosomal prokaryotic L21 protein DB248_RS03635 PF01016 Ribosomal L27 protein DB248_RS03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB248_RS03645 PF03466 LysR substrate binding domain DB248_RS03650 PF01252 Signal peptidase (SPase) II DB248_RS03655 PF00849 RNA pseudouridylate synthase DB248_RS03655 PF01479 S4 domain DB248_RS03660 PF00156 Phosphoribosyl transferase domain DB248_RS03665 PF00860 Permease family DB248_RS03670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DB248_RS03670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DB248_RS03675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DB248_RS03675 PF00117 Glutamine amidotransferase class-I DB248_RS03680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DB248_RS03680 PF02142 MGS-like domain DB248_RS03680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DB248_RS03685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DB248_RS03690 PF00005 ABC transporter DB248_RS03695 PF12704 MacB-like periplasmic core domain DB248_RS03695 PF02687 FtsX-like permease family DB248_RS03700 PF03009 Glycerophosphoryl diester phosphodiesterase family DB248_RS03705 PF00886 Ribosomal protein S16 DB248_RS03735 PF05239 PRC-barrel domain DB248_RS03735 PF01782 RimM N-terminal domain DB248_RS03740 PF01746 tRNA (Guanine-1)-methyltransferase DB248_RS03745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS03755 PF08546 Ketopantoate reductase PanE/ApbA C terminal DB248_RS03755 PF02558 Ketopantoate reductase PanE/ApbA DB248_RS03760 PF00455 DeoR C terminal sensor domain DB248_RS03760 PF08220 DeoR-like helix-turn-helix domain DB248_RS03765 PF00294 pfkB family carbohydrate kinase DB248_RS03770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS03770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DB248_RS03775 PF01476 LysM domain DB248_RS03775 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DB248_RS03780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DB248_RS03780 PF01476 LysM domain DB248_RS03790 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DB248_RS03790 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DB248_RS03795 PF09028 Mac 1 DB248_RS03800 PF00334 Nucleoside diphosphate kinase DB248_RS03810 PF02645 Uncharacterised protein, DegV family COG1307 DB248_RS03815 PF12627 Probable RNA and SrmB- binding site of polymerase A DB248_RS03815 PF13735 tRNA nucleotidyltransferase domain 2 putative DB248_RS03815 PF01743 Poly A polymerase head domain DB248_RS03820 PF12848 ABC transporter DB248_RS03820 PF16326 ABC transporter C-terminal domain DB248_RS03820 PF00005 ABC transporter DB248_RS03830 PF01327 Polypeptide deformylase DB248_RS03835 PF00149 Calcineurin-like phosphoesterase DB248_RS03835 PF17936 Bacterial Ig domain DB248_RS03835 PF02872 5'-nucleotidase, C-terminal domain DB248_RS03840 PF04607 Region found in RelA / SpoT proteins DB248_RS03845 PF00072 Response regulator receiver domain DB248_RS03845 PF00486 Transcriptional regulatory protein, C terminal DB248_RS03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS03850 PF00512 His Kinase A (phospho-acceptor) domain DB248_RS03855 PF08544 GHMP kinases C terminal DB248_RS03855 PF10509 Galactokinase galactose-binding signature DB248_RS03855 PF00288 GHMP kinases N terminal domain DB248_RS03865 PF00288 GHMP kinases N terminal domain DB248_RS03865 PF08544 GHMP kinases C terminal DB248_RS03870 PF01070 FMN-dependent dehydrogenase DB248_RS03875 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DB248_RS03880 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DB248_RS03880 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DB248_RS03885 PF00303 Thymidylate synthase DB248_RS03890 PF00186 Dihydrofolate reductase DB248_RS03900 PF07724 AAA domain (Cdc48 subfamily) DB248_RS03900 PF10431 C-terminal, D2-small domain, of ClpB protein DB248_RS03900 PF06689 ClpX C4-type zinc finger DB248_RS03905 PF01926 50S ribosome-binding GTPase DB248_RS03915 PF00004 ATPase family associated with various cellular activities (AAA) DB248_RS03915 PF17871 AAA lid domain DB248_RS03915 PF07724 AAA domain (Cdc48 subfamily) DB248_RS03915 PF10431 C-terminal, D2-small domain, of ClpB protein DB248_RS03920 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DB248_RS03925 PF01676 Metalloenzyme superfamily DB248_RS03930 PF03960 ArsC family DB248_RS03935 PF01048 Phosphorylase superfamily DB248_RS03940 PF01048 Phosphorylase superfamily DB248_RS03950 PF03466 LysR substrate binding domain DB248_RS03950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB248_RS03960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DB248_RS03965 PF00156 Phosphoribosyl transferase domain DB248_RS03970 PF01425 Amidase DB248_RS03975 PF00497 Bacterial extracellular solute-binding proteins, family 3 DB248_RS03980 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS03985 PF03167 Uracil DNA glycosylase superfamily DB248_RS03990 PF01979 Amidohydrolase family DB248_RS03995 PF02660 Glycerol-3-phosphate acyltransferase DB248_RS04000 PF00986 DNA gyrase B subunit, carboxyl terminus DB248_RS04000 PF00204 DNA gyrase B DB248_RS04000 PF01751 Toprim domain DB248_RS04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS04005 PF03989 DNA gyrase C-terminal domain, beta-propeller DB248_RS04005 PF00521 DNA gyrase/topoisomerase IV, subunit A DB248_RS04010 PF01063 Amino-transferase class IV DB248_RS04030 PF00575 S1 RNA binding domain DB248_RS04045 PF12368 Rhodanase C-terminal DB248_RS04045 PF17773 UPF0176 acylphosphatase like domain DB248_RS04045 PF00581 Rhodanese-like domain DB248_RS04075 PF16360 GTP-binding GTPase Middle Region DB248_RS04075 PF01926 50S ribosome-binding GTPase DB248_RS04075 PF13167 GTP-binding GTPase N-terminal DB248_RS04080 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DB248_RS04080 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DB248_RS04085 PF12706 Beta-lactamase superfamily domain DB248_RS04085 PF00753 Metallo-beta-lactamase superfamily DB248_RS04090 PF00106 short chain dehydrogenase DB248_RS04095 PF01368 DHH family DB248_RS04095 PF02272 DHHA1 domain DB248_RS04095 PF17768 RecJ OB domain DB248_RS04095 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DB248_RS04100 PF00156 Phosphoribosyl transferase domain DB248_RS04110 PF10576 Iron-sulfur binding domain of endonuclease III DB248_RS04110 PF00633 Helix-hairpin-helix motif DB248_RS04110 PF00730 HhH-GPD superfamily base excision DNA repair protein DB248_RS04115 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DB248_RS04120 PF01784 NIF3 (NGG1p interacting factor 3) DB248_RS04125 PF01266 FAD dependent oxidoreductase DB248_RS04130 PF00483 Nucleotidyl transferase DB248_RS04135 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DB248_RS04140 PF16363 GDP-mannose 4,6 dehydratase DB248_RS04145 PF00293 NUDIX domain DB248_RS04150 PF01594 AI-2E family transporter DB248_RS04160 PF05670 NFACT protein RNA binding domain DB248_RS04180 PF00005 ABC transporter DB248_RS04185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DB248_RS04185 PF00753 Metallo-beta-lactamase superfamily DB248_RS04185 PF17770 Ribonuclease J C-terminal domain DB248_RS04190 PF00756 Putative esterase DB248_RS04200 PF00005 ABC transporter DB248_RS04200 PF12848 ABC transporter DB248_RS04200 PF16326 ABC transporter C-terminal domain DB248_RS04205 PF00676 Dehydrogenase E1 component DB248_RS04210 PF02780 Transketolase, C-terminal domain DB248_RS04210 PF02779 Transketolase, pyrimidine binding domain DB248_RS04210 PF00364 Biotin-requiring enzyme DB248_RS04215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DB248_RS04215 PF02817 e3 binding domain DB248_RS04215 PF00364 Biotin-requiring enzyme DB248_RS04225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB248_RS04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS04240 PF02278 Polysaccharide lyase family 8, super-sandwich domain DB248_RS04240 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DB248_RS04240 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DB248_RS04245 PF03099 Biotin/lipoate A/B protein ligase family DB248_RS04245 PF10437 Bacterial lipoate protein ligase C-terminus DB248_RS04250 PF07685 CobB/CobQ-like glutamine amidotransferase domain DB248_RS04255 PF08353 Domain of unknown function (DUF1727) DB248_RS04255 PF08245 Mur ligase middle domain DB248_RS04260 PF02457 DisA bacterial checkpoint controller nucleotide-binding DB248_RS04270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DB248_RS04270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DB248_RS04270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DB248_RS04270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DB248_RS04280 PF06969 HemN C-terminal domain DB248_RS04280 PF04055 Radical SAM superfamily DB248_RS04290 PF13344 Haloacid dehalogenase-like hydrolase DB248_RS04305 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 DB248_RS04305 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 DB248_RS04305 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 DB248_RS04305 PF13395 HNH endonuclease DB248_RS04310 PF01867 CRISPR associated protein Cas1 DB248_RS04315 PF09827 CRISPR associated protein Cas2 DB248_RS04320 PF09711 CRISPR-associated protein (Cas_Csn2) DB248_RS04325 PF00589 Phage integrase family DB248_RS04375 PF00772 DnaB-like helicase N terminal domain DB248_RS04375 PF03796 DnaB-like helicase C terminal domain DB248_RS04420 PF00436 Single-strand binding protein family DB248_RS04440 PF00589 Phage integrase family DB248_RS04485 PF00574 Clp protease DB248_RS04570 PF13457 GW (Gly-Tryp) dipeptide domain DB248_RS04570 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DB248_RS04605 PF00334 Nucleoside diphosphate kinase DB248_RS04610 PF00679 Elongation factor G C-terminus DB248_RS04610 PF14492 Elongation Factor G, domain II DB248_RS04610 PF06421 GTP-binding protein LepA C-terminus DB248_RS04610 PF03144 Elongation factor Tu domain 2 DB248_RS04610 PF00009 Elongation factor Tu GTP binding domain DB248_RS04615 PF00746 LPXTG cell wall anchor motif DB248_RS04615 PF02370 M protein repeat DB248_RS04620 PF01641 SelR domain DB248_RS04625 PF03601 Conserved hypothetical protein 698 DB248_RS04635 PF03830 PTS system sorbose subfamily IIB component DB248_RS04640 PF03609 PTS system sorbose-specific iic component DB248_RS04645 PF03613 PTS system mannose/fructose/sorbose family IID component DB248_RS04650 PF06580 Histidine kinase DB248_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS04655 PF12833 Helix-turn-helix domain DB248_RS04655 PF00072 Response regulator receiver domain DB248_RS04670 PF00132 Bacterial transferase hexapeptide (six repeats) DB248_RS04670 PF14602 Hexapeptide repeat of succinyl-transferase DB248_RS04670 PF12464 Maltose acetyltransferase DB248_RS04675 PF13419 Haloacid dehalogenase-like hydrolase DB248_RS04680 PF00171 Aldehyde dehydrogenase family DB248_RS04685 PF01541 GIY-YIG catalytic domain DB248_RS04685 PF08459 UvrC Helix-hairpin-helix N-terminal DB248_RS04685 PF02151 UvrB/uvrC motif DB248_RS04690 PF00881 Nitroreductase family DB248_RS04695 PF01546 Peptidase family M20/M25/M40 DB248_RS04700 PF12631 MnmE helical domain DB248_RS04700 PF01926 50S ribosome-binding GTPase DB248_RS04700 PF10396 GTP-binding protein TrmE N-terminus DB248_RS04705 PF00466 Ribosomal protein L10 DB248_RS04710 PF16320 Ribosomal protein L7/L12 dimerisation domain DB248_RS04710 PF00542 Ribosomal protein L7/L12 C-terminal domain DB248_RS04740 PF00072 Response regulator receiver domain DB248_RS04740 PF00486 Transcriptional regulatory protein, C terminal DB248_RS04745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS04745 PF00512 His Kinase A (phospho-acceptor) domain DB248_RS04755 PF00005 ABC transporter DB248_RS04760 PF00005 ABC transporter DB248_RS04775 PF01381 Helix-turn-helix DB248_RS04795 PF00768 D-alanyl-D-alanine carboxypeptidase DB248_RS04795 PF07943 Penicillin-binding protein 5, C-terminal domain DB248_RS04805 PF08245 Mur ligase middle domain DB248_RS04805 PF02875 Mur ligase family, glutamate ligase domain DB248_RS04810 PF01227 GTP cyclohydrolase I DB248_RS04815 PF00809 Pterin binding enzyme DB248_RS04820 PF02152 Dihydroneopterin aldolase DB248_RS04825 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DB248_RS04830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DB248_RS04830 PF01565 FAD binding domain DB248_RS04835 PF00005 ABC transporter DB248_RS04835 PF08402 TOBE domain DB248_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS04850 PF13416 Bacterial extracellular solute-binding protein DB248_RS04855 PF00072 Response regulator receiver domain DB248_RS04860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DB248_RS04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS04860 PF17203 Single cache domain 3 DB248_RS04860 PF00989 PAS fold DB248_RS04865 PF03390 2-hydroxycarboxylate transporter family DB248_RS04870 PF03949 Malic enzyme, NAD binding domain DB248_RS04870 PF00390 Malic enzyme, N-terminal domain DB248_RS04875 PF08240 Alcohol dehydrogenase GroES-like domain DB248_RS04875 PF00107 Zinc-binding dehydrogenase DB248_RS04875 PF13823 Alcohol dehydrogenase GroES-associated DB248_RS04880 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DB248_RS04885 PF00654 Voltage gated chloride channel DB248_RS04895 PF01594 AI-2E family transporter DB248_RS04900 PF04002 RadC-like JAB domain DB248_RS04905 PF07722 Peptidase C26 DB248_RS04910 PF06971 Putative DNA-binding protein N-terminus DB248_RS04910 PF02629 CoA binding domain DB248_RS04920 PF00266 Aminotransferase class-V DB248_RS04925 PF14572 Phosphoribosyl synthetase-associated domain DB248_RS04925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DB248_RS04935 PF04607 Region found in RelA / SpoT proteins DB248_RS04940 PF01513 ATP-NAD kinase DB248_RS04945 PF01479 S4 domain DB248_RS04945 PF00849 RNA pseudouridylate synthase DB248_RS04950 PF01515 Phosphate acetyl/butaryl transferase DB248_RS04965 PF00571 CBS domain DB248_RS04965 PF00005 ABC transporter DB248_RS04970 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS04975 PF00478 IMP dehydrogenase / GMP reductase domain DB248_RS04985 PF00156 Phosphoribosyl transferase domain DB248_RS04990 PF00860 Permease family DB248_RS04995 PF02424 ApbE family DB248_RS05000 PF01361 Tautomerase enzyme DB248_RS05005 PF00265 Thymidine kinase DB248_RS05010 PF00472 RF-1 domain DB248_RS05010 PF03462 PCRF domain DB248_RS05015 PF05175 Methyltransferase small domain DB248_RS05030 PF00464 Serine hydroxymethyltransferase DB248_RS05045 PF00664 ABC transporter transmembrane region DB248_RS05045 PF00005 ABC transporter DB248_RS05050 PF00664 ABC transporter transmembrane region DB248_RS05050 PF00005 ABC transporter DB248_RS05055 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS05055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB248_RS05060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DB248_RS05060 PF00056 lactate/malate dehydrogenase, NAD binding domain DB248_RS05065 PF00521 DNA gyrase/topoisomerase IV, subunit A DB248_RS05065 PF03989 DNA gyrase C-terminal domain, beta-propeller DB248_RS05070 PF04203 Sortase domain DB248_RS05075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DB248_RS05095 PF03006 Haemolysin-III related DB248_RS05105 PF01926 50S ribosome-binding GTPase DB248_RS05110 PF01351 Ribonuclease HII DB248_RS05115 PF18255 DNA processing protein A sterile alpha motif domain DB248_RS05115 PF02481 DNA recombination-mediator protein A DB248_RS05120 PF01131 DNA topoisomerase DB248_RS05120 PF01751 Toprim domain DB248_RS05120 PF01396 Topoisomerase DNA binding C4 zinc finger DB248_RS05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB248_RS05140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DB248_RS05140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DB248_RS05155 PF01134 Glucose inhibited division protein A DB248_RS05160 PF02436 Conserved carboxylase domain DB248_RS05160 PF00364 Biotin-requiring enzyme DB248_RS05160 PF00682 HMGL-like DB248_RS05170 PF00364 Biotin-requiring enzyme DB248_RS05175 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DB248_RS05180 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DB248_RS05190 PF03600 Citrate transporter DB248_RS05200 PF00364 Biotin-requiring enzyme DB248_RS05205 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DB248_RS05210 PF06857 Malonate decarboxylase delta subunit (MdcD) DB248_RS05215 PF03328 HpcH/HpaI aldolase/citrate lyase family DB248_RS05220 PF04223 Citrate lyase, alpha subunit (CitF) DB248_RS05225 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DB248_RS05230 PF00364 Biotin-requiring enzyme DB248_RS05230 PF00682 HMGL-like DB248_RS05230 PF02436 Conserved carboxylase domain DB248_RS05235 PF08218 Citrate lyase ligase C-terminal domain DB248_RS05245 PF13495 Phage integrase, N-terminal SAM-like domain DB248_RS05245 PF00589 Phage integrase family DB248_RS05255 PF02978 Signal peptide binding domain DB248_RS05255 PF00448 SRP54-type protein, GTPase domain DB248_RS05255 PF02881 SRP54-type protein, helical bundle domain DB248_RS05260 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DB248_RS05265 PF00392 Bacterial regulatory proteins, gntR family DB248_RS05265 PF07702 UTRA domain DB248_RS05275 PF02540 NAD synthase DB248_RS05275 PF00958 GMP synthase C terminal domain DB248_RS05275 PF00117 Glutamine amidotransferase class-I DB248_RS05285 PF00005 ABC transporter DB248_RS05285 PF12848 ABC transporter DB248_RS05295 PF08543 Phosphomethylpyrimidine kinase DB248_RS05295 PF02581 Thiamine monophosphate synthase DB248_RS05300 PF00392 Bacterial regulatory proteins, gntR family DB248_RS05300 PF00155 Aminotransferase class I and II DB248_RS05310 PF03477 ATP cone domain DB248_RS05310 PF13597 Anaerobic ribonucleoside-triphosphate reductase DB248_RS05315 PF13091 PLD-like domain DB248_RS05320 PF01268 Formate--tetrahydrofolate ligase DB248_RS05325 PF10437 Bacterial lipoate protein ligase C-terminus DB248_RS05325 PF03099 Biotin/lipoate A/B protein ligase family DB248_RS05335 PF01661 Macro domain DB248_RS05340 PF01597 Glycine cleavage H-protein DB248_RS05345 PF00296 Luciferase-like monooxygenase DB248_RS05350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DB248_RS05355 PF03099 Biotin/lipoate A/B protein ligase family DB248_RS05360 PF04127 DNA / pantothenate metabolism flavoprotein DB248_RS05360 PF02441 Flavoprotein DB248_RS05365 PF02441 Flavoprotein DB248_RS05370 PF12822 ECF transporter, substrate-specific component DB248_RS05375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DB248_RS05375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DB248_RS05375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DB248_RS05375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DB248_RS05380 PF02653 Branched-chain amino acid transport system / permease component DB248_RS05385 PF02653 Branched-chain amino acid transport system / permease component DB248_RS05390 PF00005 ABC transporter DB248_RS05395 PF02608 ABC transporter substrate-binding protein PnrA-like DB248_RS05400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DB248_RS05405 PF05175 Methyltransferase small domain DB248_RS05410 PF00485 Phosphoribulokinase / Uridine kinase family DB248_RS05415 PF01649 Ribosomal protein S20 DB248_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS05420 PF00512 His Kinase A (phospho-acceptor) domain DB248_RS05425 PF00486 Transcriptional regulatory protein, C terminal DB248_RS05425 PF00072 Response regulator receiver domain DB248_RS05430 PF11838 ERAP1-like C-terminal domain DB248_RS05430 PF01433 Peptidase family M1 domain DB248_RS05440 PF01895 PhoU domain DB248_RS05445 PF00005 ABC transporter DB248_RS05450 PF00005 ABC transporter DB248_RS05455 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS05465 PF12849 PBP superfamily domain DB248_RS05470 PF17126 RsmF rRNA methyltransferase first C-terminal domain DB248_RS05470 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DB248_RS05470 PF01189 16S rRNA methyltransferase RsmB/F DB248_RS05475 PF00459 Inositol monophosphatase family DB248_RS05480 PF05256 Uncharacterised protein family (UPF0223) DB248_RS05485 PF03960 ArsC family DB248_RS05490 PF06574 FAD synthetase DB248_RS05490 PF01687 Riboflavin kinase DB248_RS05495 PF01509 TruB family pseudouridylate synthase (N terminal domain) DB248_RS05495 PF16198 tRNA pseudouridylate synthase B C-terminal domain DB248_RS05520 PF02687 FtsX-like permease family DB248_RS05520 PF00005 ABC transporter DB248_RS05520 PF12704 MacB-like periplasmic core domain DB248_RS05535 PF03780 Asp23 family, cell envelope-related function DB248_RS05540 PF05532 CsbD-like DB248_RS05545 PF03780 Asp23 family, cell envelope-related function DB248_RS05565 PF13361 UvrD-like helicase C-terminal domain DB248_RS05565 PF00580 UvrD/REP helicase N-terminal domain DB248_RS05570 PF01235 Sodium:alanine symporter family DB248_RS05575 PF16916 Dimerisation domain of Zinc Transporter DB248_RS05575 PF01545 Cation efflux family DB248_RS05580 PF07373 CAMP factor (Cfa) DB248_RS05585 PF00497 Bacterial extracellular solute-binding proteins, family 3 DB248_RS05590 PF00005 ABC transporter DB248_RS05595 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS05600 PF08274 PhnA Zinc-Ribbon DB248_RS05600 PF03831 PhnA domain DB248_RS05605 PF01380 SIS domain DB248_RS05610 PF10502 Signal peptidase, peptidase S26 DB248_RS05615 PF00224 Pyruvate kinase, barrel domain DB248_RS05615 PF02887 Pyruvate kinase, alpha/beta domain DB248_RS05620 PF00365 Phosphofructokinase DB248_RS05625 PF07733 Bacterial DNA polymerase III alpha NTPase domain DB248_RS05625 PF02811 PHP domain DB248_RS05625 PF14579 Helix-hairpin-helix motif DB248_RS05625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DB248_RS05625 PF01336 OB-fold nucleic acid binding domain DB248_RS05630 PF00392 Bacterial regulatory proteins, gntR family DB248_RS05635 PF00005 ABC transporter DB248_RS05660 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DB248_RS05660 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DB248_RS05790 PF17288 Terminase RNAseH like domain DB248_RS05790 PF04466 Phage terminase large subunit DB248_RS05840 PF05866 Endodeoxyribonuclease RusA DB248_RS05850 PF00436 Single-strand binding protein family DB248_RS05955 PF00343 Carbohydrate phosphorylase DB248_RS05960 PF02446 4-alpha-glucanotransferase DB248_RS05965 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DB248_RS05965 PF00356 Bacterial regulatory proteins, lacI family DB248_RS05970 PF13416 Bacterial extracellular solute-binding protein DB248_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS05980 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS05985 PF00356 Bacterial regulatory proteins, lacI family DB248_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS06005 PF00128 Alpha amylase, catalytic domain DB248_RS06005 PF01833 IPT/TIG domain DB248_RS06005 PF00686 Starch binding domain DB248_RS06010 PF02903 Alpha amylase, N-terminal ig-like domain DB248_RS06010 PF00128 Alpha amylase, catalytic domain DB248_RS06015 PF13416 Bacterial extracellular solute-binding protein DB248_RS06025 PF07859 alpha/beta hydrolase fold DB248_RS06025 PF00934 PE family DB248_RS06030 PF04914 DltD protein DB248_RS06035 PF00550 Phosphopantetheine attachment site DB248_RS06040 PF03062 MBOAT, membrane-bound O-acyltransferase family DB248_RS06045 PF13193 AMP-binding enzyme C-terminal domain DB248_RS06045 PF00501 AMP-binding enzyme DB248_RS06055 PF00271 Helicase conserved C-terminal domain DB248_RS06055 PF04851 Type III restriction enzyme, res subunit DB248_RS06055 PF02151 UvrB/uvrC motif DB248_RS06055 PF12344 Ultra-violet resistance protein B DB248_RS06055 PF17757 UvrB interaction domain DB248_RS06060 PF00497 Bacterial extracellular solute-binding proteins, family 3 DB248_RS06065 PF00005 ABC transporter DB248_RS06070 PF02378 Phosphotransferase system, EIIC DB248_RS06080 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DB248_RS06085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS06090 PF08279 HTH domain DB248_RS06090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DB248_RS06090 PF00874 PRD domain DB248_RS06090 PF05043 Mga helix-turn-helix domain DB248_RS06100 PF00232 Glycosyl hydrolase family 1 DB248_RS06115 PF01926 50S ribosome-binding GTPase DB248_RS06115 PF01018 GTP1/OBG DB248_RS06115 PF09269 Domain of unknown function (DUF1967) DB248_RS06130 PF00849 RNA pseudouridylate synthase DB248_RS06130 PF01479 S4 domain DB248_RS06140 PF07690 Major Facilitator Superfamily DB248_RS06145 PF08903 Domain of unknown function (DUF1846) DB248_RS06160 PF05958 tRNA (Uracil-5-)-methyltransferase DB248_RS06160 PF01938 TRAM domain DB248_RS06165 PF03816 Cell envelope-related transcriptional attenuator domain DB248_RS06170 PF01202 Shikimate kinase DB248_RS06175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DB248_RS06185 PF00557 Metallopeptidase family M24 DB248_RS06190 PF07085 DRTGG domain DB248_RS06190 PF00571 CBS domain DB248_RS06190 PF03061 Thioesterase superfamily DB248_RS06190 PF00392 Bacterial regulatory proteins, gntR family DB248_RS06195 PF13302 Acetyltransferase (GNAT) domain DB248_RS06200 PF17573 GA-like domain DB248_RS06200 PF01378 B domain DB248_RS06200 PF17573 GA-like domain DB248_RS06200 PF01378 B domain DB248_RS06200 PF00746 LPXTG cell wall anchor motif DB248_RS06200 PF00746 LPXTG cell wall anchor motif DB248_RS06205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DB248_RS06210 PF02772 S-adenosylmethionine synthetase, central domain DB248_RS06210 PF00438 S-adenosylmethionine synthetase, N-terminal domain DB248_RS06210 PF02773 S-adenosylmethionine synthetase, C-terminal domain DB248_RS06220 PF08279 HTH domain DB248_RS06220 PF02237 Biotin protein ligase C terminal domain DB248_RS06220 PF03099 Biotin/lipoate A/B protein ligase family DB248_RS06230 PF12169 DNA polymerase III subunits gamma and tau domain III DB248_RS06235 PF13185 GAF domain DB248_RS06250 PF00485 Phosphoribulokinase / Uridine kinase family DB248_RS06255 PF00271 Helicase conserved C-terminal domain DB248_RS06255 PF00270 DEAD/DEAH box helicase DB248_RS06260 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DB248_RS06260 PF01522 Polysaccharide deacetylase DB248_RS06265 PF00171 Aldehyde dehydrogenase family DB248_RS06270 PF00391 PEP-utilising enzyme, mobile domain DB248_RS06270 PF05524 PEP-utilising enzyme, N-terminal DB248_RS06270 PF02896 PEP-utilising enzyme, TIM barrel domain DB248_RS06275 PF00381 PTS HPr component phosphorylation site DB248_RS06280 PF00462 Glutaredoxin DB248_RS06285 PF00317 Ribonucleotide reductase, all-alpha domain DB248_RS06285 PF08343 Ribonucleotide reductase N-terminal DB248_RS06285 PF02867 Ribonucleotide reductase, barrel domain DB248_RS06290 PF00268 Ribonucleotide reductase, small chain DB248_RS06320 PF01381 Helix-turn-helix DB248_RS06325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DB248_RS06325 PF02272 DHHA1 domain DB248_RS06325 PF01411 tRNA synthetases class II (A) DB248_RS06330 PF13145 PPIC-type PPIASE domain DB248_RS06335 PF01596 O-methyltransferase DB248_RS06340 PF07690 Major Facilitator Superfamily DB248_RS06345 PF08439 Oligopeptidase F DB248_RS06345 PF01432 Peptidase family M3 DB248_RS06355 PF00849 RNA pseudouridylate synthase DB248_RS06355 PF01479 S4 domain DB248_RS06360 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DB248_RS06365 PF02547 Queuosine biosynthesis protein DB248_RS06390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DB248_RS06390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DB248_RS06400 PF13567 Domain of unknown function (DUF4131) DB248_RS06400 PF00753 Metallo-beta-lactamase superfamily DB248_RS06400 PF03772 Competence protein DB248_RS06405 PF10531 SLBB domain DB248_RS06410 PF01553 Acyltransferase DB248_RS06415 PF05175 Methyltransferase small domain DB248_RS06420 PF01541 GIY-YIG catalytic domain DB248_RS06425 PF02705 K+ potassium transporter DB248_RS06430 PF00271 Helicase conserved C-terminal domain DB248_RS06430 PF00270 DEAD/DEAH box helicase DB248_RS06435 PF16658 Class II release factor RF3, C-terminal domain DB248_RS06435 PF03144 Elongation factor Tu domain 2 DB248_RS06435 PF00009 Elongation factor Tu GTP binding domain DB248_RS06450 PF08245 Mur ligase middle domain DB248_RS06450 PF02875 Mur ligase family, glutamate ligase domain DB248_RS06450 PF01225 Mur ligase family, catalytic domain DB248_RS06455 PF07478 D-ala D-ala ligase C-terminus DB248_RS06455 PF01820 D-ala D-ala ligase N-terminus DB248_RS06460 PF02132 RecR protein DB248_RS06460 PF13662 Toprim domain DB248_RS06465 PF00905 Penicillin binding protein transpeptidase domain DB248_RS06465 PF03717 Penicillin-binding Protein dimerisation domain DB248_RS06470 PF01226 Formate/nitrite transporter DB248_RS06480 PF08279 HTH domain DB248_RS06480 PF02829 3H domain DB248_RS06485 PF00300 Histidine phosphatase superfamily (branch 1) DB248_RS06490 PF01180 Dihydroorotate dehydrogenase DB248_RS06685 PF03837 RecT family DB248_RS06735 PF01381 Helix-turn-helix DB248_RS06745 PF14659 Phage integrase, N-terminal SAM-like domain DB248_RS06745 PF00589 Phage integrase family DB248_RS06750 PF00216 Bacterial DNA-binding protein DB248_RS06760 PF13472 GDSL-like Lipase/Acylhydrolase family DB248_RS06765 PF02645 Uncharacterised protein, DegV family COG1307 DB248_RS06775 PF13476 AAA domain DB248_RS06780 PF02863 Arginine repressor, C-terminal domain DB248_RS06780 PF01316 Arginine repressor, DNA binding domain DB248_RS06785 PF01728 FtsJ-like methyltransferase DB248_RS06785 PF01479 S4 domain DB248_RS06790 PF00348 Polyprenyl synthetase DB248_RS06795 PF02609 Exonuclease VII small subunit DB248_RS06800 PF02601 Exonuclease VII, large subunit DB248_RS06800 PF13742 OB-fold nucleic acid binding domain DB248_RS06805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DB248_RS06805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DB248_RS06810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DB248_RS06810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DB248_RS06810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DB248_RS06810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DB248_RS06815 PF00875 DNA photolyase DB248_RS06815 PF03441 FAD binding domain of DNA photolyase DB248_RS06820 PF00005 ABC transporter DB248_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS06830 PF08796 Protein of unknown function (DUF1797) DB248_RS06835 PF00004 ATPase family associated with various cellular activities (AAA) DB248_RS06835 PF07724 AAA domain (Cdc48 subfamily) DB248_RS06835 PF17871 AAA lid domain DB248_RS06835 PF10431 C-terminal, D2-small domain, of ClpB protein DB248_RS06840 PF00293 NUDIX domain DB248_RS06850 PF08264 Anticodon-binding domain of tRNA DB248_RS06850 PF00133 tRNA synthetases class I (I, L, M and V) DB248_RS06855 PF05103 DivIVA protein DB248_RS06860 PF17774 Putative RNA-binding domain in YlmH DB248_RS06860 PF01479 S4 domain DB248_RS06870 PF04472 Cell division protein SepF DB248_RS06875 PF01168 Alanine racemase, N-terminal domain DB248_RS06880 PF12327 FtsZ family, C-terminal domain DB248_RS06880 PF00091 Tubulin/FtsZ family, GTPase domain DB248_RS06885 PF11983 Membrane-attachment and polymerisation-promoting switch DB248_RS06885 PF02491 SHS2 domain inserted in FTSA DB248_RS06890 PF08478 POTRA domain, FtsQ-type DB248_RS06895 PF04101 Glycosyltransferase family 28 C-terminal domain DB248_RS06895 PF03033 Glycosyltransferase family 28 N-terminal domain DB248_RS06900 PF02875 Mur ligase family, glutamate ligase domain DB248_RS06900 PF08245 Mur ligase middle domain DB248_RS06910 PF00679 Elongation factor G C-terminus DB248_RS06910 PF14492 Elongation Factor G, domain II DB248_RS06910 PF00009 Elongation factor Tu GTP binding domain DB248_RS06910 PF03144 Elongation factor Tu domain 2 DB248_RS06915 PF00581 Rhodanese-like domain DB248_RS06920 PF00480 ROK family DB248_RS06930 PF00210 Ferritin-like domain DB248_RS06940 PF04055 Radical SAM superfamily DB248_RS06945 PF06265 Protein of unknown function (DUF1027) DB248_RS06950 PF00356 Bacterial regulatory proteins, lacI family DB248_RS06955 PF13180 PDZ domain DB248_RS06955 PF05362 Lon protease (S16) C-terminal proteolytic domain DB248_RS06960 PF01467 Cytidylyltransferase-like DB248_RS06970 PF03590 Aspartate-ammonia ligase DB248_RS06975 PF00696 Amino acid kinase family DB248_RS06980 PF01546 Peptidase family M20/M25/M40 DB248_RS06985 PF03606 C4-dicarboxylate anaerobic carrier DB248_RS06990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DB248_RS06990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DB248_RS06995 PF13673 Acetyltransferase (GNAT) domain DB248_RS07010 PF02863 Arginine repressor, C-terminal domain DB248_RS07010 PF01316 Arginine repressor, DNA binding domain DB248_RS07025 PF00672 HAMP domain DB248_RS07025 PF06580 Histidine kinase DB248_RS07025 PF02743 Cache domain DB248_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS07030 PF00072 Response regulator receiver domain DB248_RS07030 PF12833 Helix-turn-helix domain DB248_RS07035 PF01625 Peptide methionine sulfoxide reductase DB248_RS07035 PF01641 SelR domain DB248_RS07040 PF08534 Redoxin DB248_RS07045 PF02683 Cytochrome C biogenesis protein transmembrane region DB248_RS07050 PF09827 CRISPR associated protein Cas2 DB248_RS07055 PF01867 CRISPR associated protein Cas1 DB248_RS07085 PF08264 Anticodon-binding domain of tRNA DB248_RS07085 PF10458 Valyl tRNA synthetase tRNA binding arm DB248_RS07085 PF00133 tRNA synthetases class I (I, L, M and V) DB248_RS07120 PF00793 DAHP synthetase I family DB248_RS07120 PF01817 Chorismate mutase type II DB248_RS07125 PF01761 3-dehydroquinate synthase DB248_RS07140 PF13649 Methyltransferase domain DB248_RS07145 PF08501 Shikimate dehydrogenase substrate binding domain DB248_RS07145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DB248_RS07150 PF16355 Domain of unknown function (DUF4982) DB248_RS07150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DB248_RS07150 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DB248_RS07150 PF00703 Glycosyl hydrolases family 2 DB248_RS07150 PF02837 Glycosyl hydrolases family 2, sugar binding domain DB248_RS07155 PF12833 Helix-turn-helix domain DB248_RS07155 PF00072 Response regulator receiver domain DB248_RS07160 PF06580 Histidine kinase DB248_RS07160 PF00672 HAMP domain DB248_RS07160 PF02743 Cache domain DB248_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS07170 PF12010 Domain of unknown function (DUF3502) DB248_RS07175 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS07180 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS07185 PF00480 ROK family DB248_RS07190 PF00232 Glycosyl hydrolase family 1 DB248_RS07195 PF07555 beta-N-acetylglucosaminidase DB248_RS07195 PF02838 Glycosyl hydrolase family 20, domain 2 DB248_RS07200 PF00392 Bacterial regulatory proteins, gntR family DB248_RS07210 PF01074 Glycosyl hydrolases family 38 N-terminal domain DB248_RS07210 PF07748 Glycosyl hydrolases family 38 C-terminal domain DB248_RS07210 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 DB248_RS07210 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain DB248_RS07210 PF09261 Alpha mannosidase middle domain DB248_RS07220 PF01938 TRAM domain DB248_RS07220 PF05958 tRNA (Uracil-5-)-methyltransferase DB248_RS07250 PF01520 N-acetylmuramoyl-L-alanine amidase DB248_RS07250 PF05257 CHAP domain DB248_RS07250 PF08460 Bacterial SH3 domain DB248_RS07255 PF05105 Bacteriophage holin family DB248_RS07420 PF05866 Endodeoxyribonuclease RusA DB248_RS07430 PF00436 Single-strand binding protein family DB248_RS07485 PF10548 P22AR C-terminal domain DB248_RS07485 PF08346 AntA/AntB antirepressor DB248_RS07510 PF00589 Phage integrase family DB248_RS07510 PF02899 Phage integrase, N-terminal SAM-like domain DB248_RS07515 PF02631 RecX family DB248_RS07520 PF04167 Protein of unknown function (DUF402) DB248_RS07595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DB248_RS07595 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DB248_RS07605 PF00271 Helicase conserved C-terminal domain DB248_RS07605 PF04851 Type III restriction enzyme, res subunit DB248_RS07610 PF09186 Domain of unknown function (DUF1949) DB248_RS07610 PF01205 Uncharacterized protein family UPF0029 DB248_RS07615 PF00291 Pyridoxal-phosphate dependent enzyme DB248_RS07620 PF00575 S1 RNA binding domain DB248_RS07625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DB248_RS07630 PF00196 Bacterial regulatory proteins, luxR family DB248_RS07630 PF00072 Response regulator receiver domain DB248_RS07635 PF07730 Histidine kinase DB248_RS07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS07635 PF00672 HAMP domain DB248_RS07645 PF00069 Protein kinase domain DB248_RS07645 PF03793 PASTA domain DB248_RS07655 PF01029 NusB family DB248_RS07655 PF01189 16S rRNA methyltransferase RsmB/F DB248_RS07660 PF02911 Formyl transferase, C-terminal domain DB248_RS07660 PF00551 Formyl transferase DB248_RS07665 PF18074 Primosomal protein N C-terminal domain DB248_RS07665 PF17764 3′ DNA-binding domain (3′BD) DB248_RS07665 PF00271 Helicase conserved C-terminal domain DB248_RS07665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DB248_RS07665 PF04851 Type III restriction enzyme, res subunit DB248_RS07670 PF01192 RNA polymerase Rpb6 DB248_RS07675 PF00625 Guanylate kinase DB248_RS07680 PF01966 HD domain DB248_RS07680 PF12072 Domain of unknown function (DUF3552) DB248_RS07680 PF00013 KH domain DB248_RS07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB248_RS07685 PF03466 LysR substrate binding domain DB248_RS07690 PF00108 Thiolase, N-terminal domain DB248_RS07690 PF02803 Thiolase, C-terminal domain DB248_RS07695 PF01144 Coenzyme A transferase DB248_RS07700 PF01144 Coenzyme A transferase DB248_RS07715 PF02664 S-Ribosylhomocysteinase (LuxS) DB248_RS07720 PF18041 MapZ extracellular domain 1 DB248_RS07720 PF18708 MapZ extracellular C-terminal domain 2 DB248_RS07725 PF02926 THUMP domain DB248_RS07725 PF01170 Putative RNA methylase family UPF0020 DB248_RS07735 PF05103 DivIVA protein DB248_RS07740 PF06908 YspA SLOG family DB248_RS07745 PF03838 Recombination protein U DB248_RS07750 PF00905 Penicillin binding protein transpeptidase domain DB248_RS07750 PF00912 Transglycosylase DB248_RS07755 PF03051 Peptidase C1-like family DB248_RS07760 PF02540 NAD synthase DB248_RS07765 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DB248_RS07765 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DB248_RS07765 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DB248_RS07770 PF00324 Amino acid permease DB248_RS07775 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS07785 PF00005 ABC transporter DB248_RS07790 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS07795 PF00270 DEAD/DEAH box helicase DB248_RS07795 PF00271 Helicase conserved C-terminal domain DB248_RS07800 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DB248_RS07800 PF00953 Glycosyl transferase family 4 DB248_RS07805 PF03793 PASTA domain DB248_RS07805 PF00905 Penicillin binding protein transpeptidase domain DB248_RS07805 PF03717 Penicillin-binding Protein dimerisation domain DB248_RS07815 PF01795 MraW methylase family DB248_RS07830 PF00171 Aldehyde dehydrogenase family DB248_RS07835 PF00696 Amino acid kinase family DB248_RS07845 PF00005 ABC transporter DB248_RS07855 PF02779 Transketolase, pyrimidine binding domain DB248_RS07855 PF02780 Transketolase, C-terminal domain DB248_RS07855 PF00456 Transketolase, thiamine diphosphate binding domain DB248_RS07860 PF00923 Transaldolase/Fructose-6-phosphate aldolase DB248_RS07870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB248_RS07870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS07875 PF00230 Major intrinsic protein DB248_RS07880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DB248_RS07880 PF01266 FAD dependent oxidoreductase DB248_RS07890 PF03413 Peptidase propeptide and YPEB domain DB248_RS07895 PF05979 Bacterial protein of unknown function (DUF896) DB248_RS07900 PF02092 Glycyl-tRNA synthetase beta subunit DB248_RS07905 PF02091 Glycyl-tRNA synthetase alpha subunit DB248_RS07915 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DB248_RS07920 PF00248 Aldo/keto reductase family DB248_RS07925 PF01979 Amidohydrolase family DB248_RS07930 PF02690 Na+/Pi-cotransporter DB248_RS07940 PF02645 Uncharacterised protein, DegV family COG1307 DB248_RS07945 PF00440 Bacterial regulatory proteins, tetR family DB248_RS07955 PF03458 UPF0126 domain DB248_RS07960 PF01791 DeoC/LacD family aldolase DB248_RS07970 PF02502 Ribose/Galactose Isomerase DB248_RS07975 PF02502 Ribose/Galactose Isomerase DB248_RS07995 PF00455 DeoR C terminal sensor domain DB248_RS07995 PF08220 DeoR-like helix-turn-helix domain DB248_RS08010 PF00403 Heavy-metal-associated domain DB248_RS08020 PF07859 alpha/beta hydrolase fold DB248_RS08025 PF02033 Ribosome-binding factor A DB248_RS08030 PF00009 Elongation factor Tu GTP binding domain DB248_RS08030 PF11987 Translation-initiation factor 2 DB248_RS08030 PF04760 Translation initiation factor IF-2, N-terminal region DB248_RS08035 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DB248_RS08040 PF04296 Protein of unknown function (DUF448) DB248_RS08045 PF08529 NusA N-terminal domain DB248_RS08045 PF00575 S1 RNA binding domain DB248_RS08045 PF13184 NusA-like KH domain DB248_RS08050 PF17384 RimP C-terminal SH3 domain DB248_RS08050 PF02576 RimP N-terminal domain DB248_RS08060 PF02390 Putative methyltransferase DB248_RS08070 PF05975 Bacterial ABC transporter protein EcsB DB248_RS08075 PF00005 ABC transporter DB248_RS08080 PF01230 HIT domain DB248_RS08090 PF03816 Cell envelope-related transcriptional attenuator domain DB248_RS08100 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DB248_RS08105 PF00860 Permease family DB248_RS08115 PF03610 PTS system fructose IIA component DB248_RS08115 PF03830 PTS system sorbose subfamily IIB component DB248_RS08120 PF03609 PTS system sorbose-specific iic component DB248_RS08125 PF03613 PTS system mannose/fructose/sorbose family IID component DB248_RS08135 PF02403 Seryl-tRNA synthetase N-terminal domain DB248_RS08135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DB248_RS08140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DB248_RS08145 PF01039 Carboxyl transferase domain DB248_RS08145 PF17848 Acetyl-coA carboxylase zinc finger domain DB248_RS08150 PF02785 Biotin carboxylase C-terminal domain DB248_RS08150 PF00289 Biotin carboxylase, N-terminal domain DB248_RS08150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DB248_RS08155 PF07977 FabA-like domain DB248_RS08160 PF00364 Biotin-requiring enzyme DB248_RS08165 PF02801 Beta-ketoacyl synthase, C-terminal domain DB248_RS08165 PF00109 Beta-ketoacyl synthase, N-terminal domain DB248_RS08175 PF00698 Acyl transferase domain DB248_RS08180 PF03060 Nitronate monooxygenase DB248_RS08185 PF00550 Phosphopantetheine attachment site DB248_RS08190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DB248_RS08190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DB248_RS08200 PF00378 Enoyl-CoA hydratase/isomerase DB248_RS08205 PF00684 DnaJ central domain DB248_RS08205 PF01556 DnaJ C terminal domain DB248_RS08205 PF00226 DnaJ domain DB248_RS08210 PF00012 Hsp70 protein DB248_RS08215 PF01025 GrpE DB248_RS08220 PF01628 HrcA protein C terminal domain DB248_RS08220 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DB248_RS08235 PF00300 Histidine phosphatase superfamily (branch 1) DB248_RS08240 PF04226 Transglycosylase associated protein DB248_RS08250 PF02637 GatB domain DB248_RS08250 PF02934 GatB/GatE catalytic domain DB248_RS08255 PF01425 Amidase DB248_RS08260 PF02686 Glu-tRNAGln amidotransferase C subunit DB248_RS08275 PF00857 Isochorismatase family DB248_RS08280 PF08222 CodY helix-turn-helix domain DB248_RS08280 PF06018 CodY GAF-like domain DB248_RS08285 PF00155 Aminotransferase class I and II DB248_RS08300 PF17763 Glutaminase/Asparaginase C-terminal domain DB248_RS08300 PF00710 Asparaginase, N-terminal DB248_RS08310 PF00005 ABC transporter DB248_RS08315 PF00270 DEAD/DEAH box helicase DB248_RS08315 PF17191 RecG wedge domain DB248_RS08315 PF00271 Helicase conserved C-terminal domain DB248_RS08325 PF00005 ABC transporter DB248_RS08340 PF00664 ABC transporter transmembrane region DB248_RS08340 PF00005 ABC transporter DB248_RS08345 PF00005 ABC transporter DB248_RS08345 PF00664 ABC transporter transmembrane region DB248_RS08350 PF00005 ABC transporter DB248_RS08355 PF01032 FecCD transport family DB248_RS08360 PF01497 Periplasmic binding protein DB248_RS08375 PF01476 LysM domain DB248_RS08375 PF05257 CHAP domain DB248_RS08380 PF01168 Alanine racemase, N-terminal domain DB248_RS08380 PF00842 Alanine racemase, C-terminal domain DB248_RS08385 PF01648 4'-phosphopantetheinyl transferase superfamily DB248_RS08390 PF02810 SEC-C motif DB248_RS08390 PF07517 SecA DEAD-like domain DB248_RS08390 PF01043 SecA preprotein cross-linking domain DB248_RS08390 PF07516 SecA Wing and Scaffold domain DB248_RS08405 PF01238 Phosphomannose isomerase type I DB248_RS08410 PF00480 ROK family DB248_RS08420 PF02378 Phosphotransferase system, EIIC DB248_RS08420 PF00367 phosphotransferase system, EIIB DB248_RS08420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DB248_RS08425 PF00251 Glycosyl hydrolases family 32 N-terminal domain DB248_RS08425 PF08244 Glycosyl hydrolases family 32 C terminal DB248_RS08430 PF00356 Bacterial regulatory proteins, lacI family DB248_RS08435 PF01029 NusB family DB248_RS08440 PF03780 Asp23 family, cell envelope-related function DB248_RS08445 PF09285 Elongation factor P, C-terminal DB248_RS08445 PF08207 Elongation factor P (EF-P) KOW-like domain DB248_RS08445 PF01132 Elongation factor P (EF-P) OB domain DB248_RS08450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DB248_RS08455 PF01321 Creatinase/Prolidase N-terminal domain DB248_RS08455 PF00557 Metallopeptidase family M24 DB248_RS08460 PF00005 ABC transporter DB248_RS08460 PF17755 UvrA DNA-binding domain DB248_RS08460 PF17760 UvrA interaction domain DB248_RS08475 PF01084 Ribosomal protein S18 DB248_RS08480 PF00436 Single-strand binding protein family DB248_RS08485 PF01250 Ribosomal protein S6 DB248_RS08495 PF00730 HhH-GPD superfamily base excision DNA repair protein DB248_RS08495 PF14815 NUDIX domain DB248_RS08500 PF01381 Helix-turn-helix DB248_RS08505 PF00085 Thioredoxin DB248_RS08515 PF01713 Smr domain DB248_RS08515 PF00488 MutS domain V DB248_RS08530 PF01351 Ribonuclease HII DB248_RS08530 PF11858 Domain of unknown function (DUF3378) DB248_RS08535 PF10502 Signal peptidase, peptidase S26 DB248_RS08540 PF13538 UvrD-like helicase C-terminal domain DB248_RS08540 PF14490 Helix-hairpin-helix containing domain DB248_RS08540 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DB248_RS08550 PF11799 impB/mucB/samB family C-terminal domain DB248_RS08550 PF11798 IMS family HHH motif DB248_RS08550 PF00817 impB/mucB/samB family DB248_RS08555 PF01228 Glycine radical DB248_RS08555 PF02901 Pyruvate formate lyase-like DB248_RS08560 PF00144 Beta-lactamase DB248_RS08575 PF00230 Major intrinsic protein DB248_RS08585 PF07690 Major Facilitator Superfamily DB248_RS08590 PF13545 Crp-like helix-turn-helix domain DB248_RS08595 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DB248_RS08595 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DB248_RS08595 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DB248_RS08610 PF02575 YbaB/EbfC DNA-binding family DB248_RS08615 PF07739 TipAS antibiotic-recognition domain DB248_RS08615 PF13411 MerR HTH family regulatory protein DB248_RS08625 PF04394 Protein of unknown function, DUF536 DB248_RS08625 PF08279 HTH domain DB248_RS08635 PF01791 DeoC/LacD family aldolase DB248_RS08640 PF01773 Na+ dependent nucleoside transporter N-terminus DB248_RS08640 PF07670 Nucleoside recognition DB248_RS08640 PF07662 Na+ dependent nucleoside transporter C-terminus DB248_RS08645 PF01048 Phosphorylase superfamily DB248_RS08655 PF00253 Ribosomal protein S14p/S29e DB248_RS08660 PF00814 Glycoprotease family DB248_RS08665 PF00583 Acetyltransferase (GNAT) family DB248_RS08670 PF00814 Glycoprotease family DB248_RS08675 PF07288 Protein of unknown function (DUF1447) DB248_RS08680 PF00753 Metallo-beta-lactamase superfamily DB248_RS08680 PF17770 Ribonuclease J C-terminal domain DB248_RS08680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DB248_RS08685 PF00120 Glutamine synthetase, catalytic domain DB248_RS08685 PF03951 Glutamine synthetase, beta-Grasp domain DB248_RS08690 PF13411 MerR HTH family regulatory protein DB248_RS08700 PF00162 Phosphoglycerate kinase DB248_RS08705 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DB248_RS08715 PF13684 Dihydroxyacetone kinase family DB248_RS08715 PF02734 DAK2 domain DB248_RS08720 PF03780 Asp23 family, cell envelope-related function DB248_RS08725 PF00830 Ribosomal L28 family DB248_RS08730 PF01116 Fructose-bisphosphate aldolase class-II DB248_RS08745 PF06418 CTP synthase N-terminus DB248_RS08745 PF00117 Glutamine amidotransferase class-I DB248_RS08750 PF05066 HB1, ASXL, restriction endonuclease HTH domain DB248_RS08755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DB248_RS08755 PF05698 Bacterial trigger factor protein (TF) C-terminus DB248_RS08755 PF05697 Bacterial trigger factor protein (TF) DB248_RS08760 PF00924 Mechanosensitive ion channel DB248_RS08765 PF04260 Protein of unknown function (DUF436) DB248_RS08770 PF07155 ECF-type riboflavin transporter, S component DB248_RS08775 PF08543 Phosphomethylpyrimidine kinase DB248_RS08780 PF01416 tRNA pseudouridine synthase DB248_RS08820 PF02595 Glycerate kinase family DB248_RS08825 PF12008 Type I restriction and modification enzyme - subunit R C terminal DB248_RS08825 PF18766 SWI2/SNF2 ATPase DB248_RS08825 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DB248_RS08835 PF02384 N-6 DNA Methylase DB248_RS08835 PF12161 HsdM N-terminal domain DB248_RS08845 PF00072 Response regulator receiver domain DB248_RS08845 PF00486 Transcriptional regulatory protein, C terminal DB248_RS08855 PF02687 FtsX-like permease family DB248_RS08860 PF00005 ABC transporter DB248_RS08865 PF00664 ABC transporter transmembrane region DB248_RS08865 PF00005 ABC transporter DB248_RS08865 PF03412 Peptidase C39 family DB248_RS08875 PF04604 Type-A lantibiotic DB248_RS08880 PF00232 Glycosyl hydrolase family 1 DB248_RS08885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS08885 PF02378 Phosphotransferase system, EIIC DB248_RS08890 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DB248_RS08895 PF01791 DeoC/LacD family aldolase DB248_RS08900 PF00294 pfkB family carbohydrate kinase DB248_RS08905 PF02502 Ribose/Galactose Isomerase DB248_RS08910 PF02502 Ribose/Galactose Isomerase DB248_RS08915 PF08220 DeoR-like helix-turn-helix domain DB248_RS08915 PF00455 DeoR C terminal sensor domain DB248_RS08940 PF02899 Phage integrase, N-terminal SAM-like domain DB248_RS08940 PF00589 Phage integrase family DB248_RS08945 PF00380 Ribosomal protein S9/S16 DB248_RS08950 PF00572 Ribosomal protein L13 DB248_RS08955 PF01381 Helix-turn-helix DB248_RS08965 PF02645 Uncharacterised protein, DegV family COG1307 DB248_RS08975 PF00588 SpoU rRNA Methylase family DB248_RS08975 PF08032 RNA 2'-O ribose methyltransferase substrate binding DB248_RS08985 PF00636 Ribonuclease III domain DB248_RS08990 PF09190 DALR domain DB248_RS08990 PF01406 tRNA synthetases class I (C) catalytic domain DB248_RS09005 PF06426 Serine acetyltransferase, N-terminal DB248_RS09005 PF00132 Bacterial transferase hexapeptide (six repeats) DB248_RS09015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DB248_RS09015 PF00013 KH domain DB248_RS09015 PF01138 3' exoribonuclease family, domain 1 DB248_RS09015 PF03725 3' exoribonuclease family, domain 2 DB248_RS09015 PF00575 S1 RNA binding domain DB248_RS09020 PF00923 Transaldolase/Fructose-6-phosphate aldolase DB248_RS09030 PF03611 PTS system sugar-specific permease component DB248_RS09035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS09040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS09040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DB248_RS09040 PF00874 PRD domain DB248_RS09040 PF05043 Mga helix-turn-helix domain DB248_RS09040 PF08279 HTH domain DB248_RS09045 PF00312 Ribosomal protein S15 DB248_RS09060 PF01327 Polypeptide deformylase DB248_RS09065 PF03358 NADPH-dependent FMN reductase DB248_RS09070 PF01047 MarR family DB248_RS09075 PF14579 Helix-hairpin-helix motif DB248_RS09075 PF00929 Exonuclease DB248_RS09075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DB248_RS09075 PF07733 Bacterial DNA polymerase III alpha NTPase domain DB248_RS09075 PF02811 PHP domain DB248_RS09075 PF14480 DNA polymerase III polC-type N-terminus I DB248_RS09075 PF11490 DNA polymerase III polC-type N-terminus II DB248_RS09080 PF03129 Anticodon binding domain DB248_RS09080 PF04073 Aminoacyl-tRNA editing domain DB248_RS09080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DB248_RS09085 PF13180 PDZ domain DB248_RS09085 PF02163 Peptidase family M50 DB248_RS09095 PF01255 Putative undecaprenyl diphosphate synthase DB248_RS09100 PF02699 Preprotein translocase subunit DB248_RS09110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DB248_RS09110 PF17999 Pullulanase N1-terminal domain DB248_RS09110 PF00128 Alpha amylase, catalytic domain DB248_RS09120 PF00128 Alpha amylase, catalytic domain DB248_RS09125 PF00005 ABC transporter DB248_RS09125 PF17912 MalK OB fold domain DB248_RS09125 PF03459 TOBE domain DB248_RS09130 PF13556 PucR C-terminal helix-turn-helix domain DB248_RS09135 PF02821 Staphylokinase/Streptokinase family DB248_RS09140 PF02580 D-Tyr-tRNA(Tyr) deacylase DB248_RS09145 PF13291 ACT domain DB248_RS09145 PF04607 Region found in RelA / SpoT proteins DB248_RS09145 PF02824 TGS domain DB248_RS09150 PF00746 LPXTG cell wall anchor motif DB248_RS09150 PF02370 M protein repeat DB248_RS09155 PF07972 NrdI Flavodoxin like DB248_RS09160 PF03372 Endonuclease/Exonuclease/phosphatase family DB248_RS09165 PF02378 Phosphotransferase system, EIIC DB248_RS09165 PF00367 phosphotransferase system, EIIB DB248_RS09165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DB248_RS09170 PF04452 RNA methyltransferase DB248_RS09185 PF00425 chorismate binding enzyme DB248_RS09185 PF04715 Anthranilate synthase component I, N terminal region DB248_RS09190 PF00117 Glutamine amidotransferase class-I DB248_RS09195 PF05496 Holliday junction DNA helicase RuvB P-loop domain DB248_RS09195 PF12002 MgsA AAA+ ATPase C terminal DB248_RS09195 PF16193 AAA C-terminal domain DB248_RS09220 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DB248_RS09220 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DB248_RS09230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DB248_RS09235 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS09240 PF00528 Binding-protein-dependent transport system inner membrane component DB248_RS09245 PF12558 ATP-binding cassette cobalt transporter DB248_RS09245 PF00005 ABC transporter DB248_RS09250 PF00005 ABC transporter DB248_RS09255 PF05532 CsbD-like DB248_RS09265 PF01297 Zinc-uptake complex component A periplasmic DB248_RS09275 PF06280 Fn3-like domain DB248_RS09275 PF00082 Subtilase family DB248_RS09275 PF02225 PA domain DB248_RS09290 PF04650 YSIRK type signal peptide DB248_RS09290 PF00746 LPXTG cell wall anchor motif DB248_RS09290 PF02370 M protein repeat DB248_RS09295 PF00746 LPXTG cell wall anchor motif DB248_RS09295 PF04650 YSIRK type signal peptide DB248_RS09300 PF05043 Mga helix-turn-helix domain DB248_RS09300 PF08270 M protein trans-acting positive regulator (MGA) PRD domain DB248_RS09300 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DB248_RS09315 PF05257 CHAP domain DB248_RS09315 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DB248_RS09320 PF13493 Domain of unknown function (DUF4118) DB248_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB248_RS09320 PF00512 His Kinase A (phospho-acceptor) domain DB248_RS09320 PF02702 Osmosensitive K+ channel His kinase sensor domain DB248_RS09325 PF00072 Response regulator receiver domain DB248_RS09325 PF00486 Transcriptional regulatory protein, C terminal DB248_RS09330 PF12704 MacB-like periplasmic core domain DB248_RS09330 PF02687 FtsX-like permease family DB248_RS09335 PF00005 ABC transporter DB248_RS09360 PF13145 PPIC-type PPIASE domain DB248_RS09375 PF13734 Spi protease inhibitor DB248_RS09375 PF01640 Peptidase C10 family DB248_RS09400 PF04608 Phosphatidylglycerophosphatase A DB248_RS09405 PF00465 Iron-containing alcohol dehydrogenase DB248_RS09410 PF00923 Transaldolase/Fructose-6-phosphate aldolase DB248_RS09415 PF02901 Pyruvate formate lyase-like DB248_RS09415 PF01228 Glycine radical DB248_RS09420 PF02378 Phosphotransferase system, EIIC DB248_RS09425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DB248_RS09430 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DB248_RS09435 PF04198 Putative sugar-binding domain DB248_RS09440 PF08220 DeoR-like helix-turn-helix domain DB248_RS09440 PF00455 DeoR C terminal sensor domain DB248_RS09445 PF04055 Radical SAM superfamily DB248_RS09460 PF00471 Ribosomal protein L33 DB248_RS09465 PF00905 Penicillin binding protein transpeptidase domain DB248_RS09465 PF00912 Transglycosylase DB248_RS09480 PF00849 RNA pseudouridylate synthase DB248_RS09480 PF01479 S4 domain DB248_RS09490 PF03577 Peptidase family C69 DB248_RS09505 PF00118 TCP-1/cpn60 chaperonin family DB248_RS09510 PF00166 Chaperonin 10 Kd subunit DB248_RS09515 PF07724 AAA domain (Cdc48 subfamily) DB248_RS09515 PF00004 ATPase family associated with various cellular activities (AAA) DB248_RS09515 PF17871 AAA lid domain DB248_RS09515 PF02861 Clp amino terminal domain, pathogenicity island component DB248_RS09515 PF10431 C-terminal, D2-small domain, of ClpB protein DB248_RS09520 PF17727 CtsR C-terminal dimerization domain DB248_RS09520 PF05848 CtsR N-terminal HTH domain DB248_RS09525 PF00313 'Cold-shock' DNA-binding domain DB248_RS09535 PF00578 AhpC/TSA family DB248_RS09540 PF13192 Thioredoxin domain DB248_RS09540 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB248_RS09545 PF01979 Amidohydrolase family DB248_RS09550 PF01175 Urocanase Rossmann-like domain DB248_RS09550 PF17392 Urocanase C-terminal domain DB248_RS09550 PF17391 Urocanase N-terminal domain DB248_RS09555 PF02971 Formiminotransferase domain DB248_RS09555 PF07837 Formiminotransferase domain, N-terminal subdomain DB248_RS09560 PF04961 Formiminotransferase-cyclodeaminase DB248_RS09565 PF01268 Formate--tetrahydrofolate ligase DB248_RS09575 PF13520 Amino acid permease DB248_RS09580 PF00221 Aromatic amino acid lyase DB248_RS09585 PF00491 Arginase family DB248_RS09595 PF00318 Ribosomal protein S2 DB248_RS09600 PF00889 Elongation factor TS DB248_RS09605 PF01431 Peptidase family M13 DB248_RS09605 PF05649 Peptidase family M13 DB248_RS09610 PF00128 Alpha amylase, catalytic domain DB248_RS09610 PF16657 Maltogenic Amylase, C-terminal domain DB248_RS09615 PF02378 Phosphotransferase system, EIIC DB248_RS09615 PF00367 phosphotransferase system, EIIB DB248_RS09620 PF07702 UTRA domain DB248_RS09620 PF00392 Bacterial regulatory proteins, gntR family DB248_RS09630 PF01638 HxlR-like helix-turn-helix DB248_RS09635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DB248_RS09640 PF03883 Peroxide stress protein YaaA DB248_RS09655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DB248_RS09660 PF03477 ATP cone domain DB248_RS09660 PF13597 Anaerobic ribonucleoside-triphosphate reductase DB248_RS09670 PF06949 Protein of unknown function (DUF1292) DB248_RS09675 PF03652 Holliday junction resolvase DB248_RS09680 PF06135 IreB regulatory phosphoprotein DB248_RS09685 PF03960 ArsC family DB248_RS09690 PF00154 recA bacterial DNA recombination protein DB248_RS09695 PF02464 Competence-damaged protein DB248_RS09695 PF18146 Damage-inducible protein CinA KH domain DB248_RS09695 PF00994 Probable molybdopterin binding domain DB248_RS09700 PF03352 Methyladenine glycosylase DB248_RS09700 PF13302 Acetyltransferase (GNAT) domain DB248_RS09700 PF13673 Acetyltransferase (GNAT) domain DB248_RS09700 PF00958 GMP synthase C terminal domain DB248_RS09700 PF00117 Glutamine amidotransferase class-I DB248_RS09705 PF01330 RuvA N terminal domain DB248_RS09705 PF07499 RuvA, C-terminal domain DB248_RS09710 PF07690 Major Facilitator Superfamily DB248_RS09715 PF08676 MutL C terminal dimerisation domain DB248_RS09715 PF01119 DNA mismatch repair protein, C-terminal domain DB248_RS09720 PF00488 MutS domain V DB248_RS09720 PF05190 MutS family domain IV DB248_RS09720 PF05192 MutS domain III DB248_RS09720 PF05188 MutS domain II DB248_RS09720 PF01624 MutS domain I DB248_RS09730 PF02863 Arginine repressor, C-terminal domain DB248_RS09730 PF01316 Arginine repressor, DNA binding domain DB248_RS09735 PF05746 DALR anticodon binding domain DB248_RS09735 PF03485 Arginyl tRNA synthetase N terminal domain DB248_RS09735 PF00750 tRNA synthetases class I (R) DB248_RS09745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DB248_RS09745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DB248_RS09750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DB248_RS09750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DB248_RS09755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DB248_RS09755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DB248_RS09760 PF01336 OB-fold nucleic acid binding domain DB248_RS09760 PF00152 tRNA synthetases class II (D, K and N) DB248_RS09760 PF02938 GAD domain DB248_RS09765 PF13393 Histidyl-tRNA synthetase DB248_RS09765 PF03129 Anticodon binding domain DB248_RS09770 PF01783 Ribosomal L32p protein family DB248_RS09775 PF00471 Ribosomal protein L33 DB248_RS09790 PF01022 Bacterial regulatory protein, arsR family DB248_RS09820 PF00293 NUDIX domain DB248_RS09825 PF03551 Transcriptional regulator PadR-like family DB248_RS09850 PF01479 S4 domain DB248_RS09850 PF00163 Ribosomal protein S4/S9 N-terminal domain DB248_RS09860 PF13808 DDE_Tnp_1-associated DB248_RS09860 PF01609 Transposase DDE domain DB248_RS09870 PF00772 DnaB-like helicase N terminal domain DB248_RS09870 PF03796 DnaB-like helicase C terminal domain DB248_RS09875 PF03948 Ribosomal protein L9, C-terminal domain DB248_RS09875 PF01281 Ribosomal protein L9, N-terminal domain DB248_RS09880 PF01368 DHH family DB248_RS09880 PF02272 DHHA1 domain DB248_RS09885 PF13932 GidA associated domain DB248_RS09885 PF01134 Glucose inhibited division protein A DB248_RS09900 PF03315 Serine dehydratase beta chain DB248_RS09900 PF01842 ACT domain DB248_RS09905 PF03313 Serine dehydratase alpha chain DB248_RS09910 PF06737 Transglycosylase-like domain DB248_RS09915 PF02361 Cobalt transport protein DB248_RS09920 PF00005 ABC transporter DB248_RS09925 PF00005 ABC transporter DB248_RS09930 PF01066 CDP-alcohol phosphatidyltransferase DB248_RS09940 PF00675 Insulinase (Peptidase family M16) DB248_RS09940 PF05193 Peptidase M16 inactive domain DB248_RS09950 PF00535 Glycosyl transferase family 2 DB248_RS09955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DB248_RS09955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DB248_RS09955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DB248_RS09965 PF00483 Nucleotidyl transferase DB248_RS09975 PF02463 RecF/RecN/SMC N terminal domain DB248_RS09980 PF06800 Sugar transport protein DB248_RS09985 PF00571 CBS domain DB248_RS09985 PF00478 IMP dehydrogenase / GMP reductase domain DB248_RS09990 PF00579 tRNA synthetases class I (W and Y) DB248_RS09995 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DB248_RS09995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DB248_RS10000 PF12848 ABC transporter DB248_RS10000 PF00005 ABC transporter DB248_RS10035 PF02590 Predicted SPOUT methyltransferase DB248_RS10040 PF13180 PDZ domain DB248_RS10045 PF17762 HTH domain found in ParB protein DB248_RS10045 PF02195 ParB-like nuclease domain