locus-tag class description JMUB1235_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JMUB1235_RS00005 PF00308 Bacterial dnaA protein JMUB1235_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JMUB1235_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JMUB1235_RS00010 PF02767 DNA polymerase III beta subunit, central domain JMUB1235_RS00020 PF06071 Protein of unknown function (DUF933) JMUB1235_RS00020 PF01926 50S ribosome-binding GTPase JMUB1235_RS00025 PF01195 Peptidyl-tRNA hydrolase JMUB1235_RS00030 PF17757 UvrB interaction domain JMUB1235_RS00030 PF03461 TRCF domain JMUB1235_RS00030 PF00271 Helicase conserved C-terminal domain JMUB1235_RS00030 PF00270 DEAD/DEAH box helicase JMUB1235_RS00030 PF02559 CarD-like/TRCF domain JMUB1235_RS00035 PF01479 S4 domain JMUB1235_RS00050 PF01171 PP-loop family JMUB1235_RS00055 PF00156 Phosphoribosyl transferase domain JMUB1235_RS00060 PF01434 Peptidase family M41 JMUB1235_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) JMUB1235_RS00060 PF17862 AAA+ lid domain JMUB1235_RS00060 PF06480 FtsH Extracellular JMUB1235_RS00065 PF13520 Amino acid permease JMUB1235_RS00175 PF05257 CHAP domain JMUB1235_RS00175 PF01476 LysM domain JMUB1235_RS00180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JMUB1235_RS00180 PF14572 Phosphoribosyl synthetase-associated domain JMUB1235_RS00185 PF02565 Recombination protein O C terminal JMUB1235_RS00185 PF11967 Recombination protein O N terminal JMUB1235_RS00190 PF02504 Fatty acid synthesis protein JMUB1235_RS00195 PF00550 Phosphopantetheine attachment site JMUB1235_RS00200 PF01259 SAICAR synthetase JMUB1235_RS00205 PF00586 AIR synthase related protein, N-terminal domain JMUB1235_RS00205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JMUB1235_RS00205 PF02769 AIR synthase related protein, C-terminal domain JMUB1235_RS00210 PF13537 Glutamine amidotransferase domain JMUB1235_RS00210 PF00156 Phosphoribosyl transferase domain JMUB1235_RS00215 PF02769 AIR synthase related protein, C-terminal domain JMUB1235_RS00215 PF00586 AIR synthase related protein, N-terminal domain JMUB1235_RS00220 PF00551 Formyl transferase JMUB1235_RS00225 PF02142 MGS-like domain JMUB1235_RS00225 PF01808 AICARFT/IMPCHase bienzyme JMUB1235_RS00235 PF02844 Phosphoribosylglycinamide synthetase, N domain JMUB1235_RS00235 PF02843 Phosphoribosylglycinamide synthetase, C domain JMUB1235_RS00235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JMUB1235_RS00240 PF00731 AIR carboxylase JMUB1235_RS00245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JMUB1235_RS00245 PF02222 ATP-grasp domain JMUB1235_RS00255 PF10397 Adenylosuccinate lyase C-terminus JMUB1235_RS00255 PF00206 Lyase JMUB1235_RS00265 PF17864 RuvB AAA lid domain JMUB1235_RS00265 PF05491 RuvB C-terminal winged helix domain JMUB1235_RS00265 PF05496 Holliday junction DNA helicase RuvB P-loop domain JMUB1235_RS00270 PF01451 Low molecular weight phosphotyrosine protein phosphatase JMUB1235_RS00280 PF01757 Acyltransferase family JMUB1235_RS00285 PF00465 Iron-containing alcohol dehydrogenase JMUB1235_RS00285 PF00171 Aldehyde dehydrogenase family JMUB1235_RS00290 PF08240 Alcohol dehydrogenase GroES-like domain JMUB1235_RS00290 PF00107 Zinc-binding dehydrogenase JMUB1235_RS00295 PF01554 MatE JMUB1235_RS00300 PF00338 Ribosomal protein S10p/S20e JMUB1235_RS00305 PF00297 Ribosomal protein L3 JMUB1235_RS00310 PF00573 Ribosomal protein L4/L1 family JMUB1235_RS00315 PF00276 Ribosomal protein L23 JMUB1235_RS00320 PF00181 Ribosomal Proteins L2, RNA binding domain JMUB1235_RS00320 PF03947 Ribosomal Proteins L2, C-terminal domain JMUB1235_RS00325 PF00203 Ribosomal protein S19 JMUB1235_RS00330 PF00237 Ribosomal protein L22p/L17e JMUB1235_RS00335 PF07650 KH domain JMUB1235_RS00335 PF00189 Ribosomal protein S3, C-terminal domain JMUB1235_RS00340 PF00252 Ribosomal protein L16p/L10e JMUB1235_RS00345 PF00831 Ribosomal L29 protein JMUB1235_RS00350 PF00366 Ribosomal protein S17 JMUB1235_RS00355 PF00238 Ribosomal protein L14p/L23e JMUB1235_RS00360 PF00467 KOW motif JMUB1235_RS00360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JMUB1235_RS00365 PF00281 Ribosomal protein L5 JMUB1235_RS00365 PF00673 ribosomal L5P family C-terminus JMUB1235_RS00370 PF00253 Ribosomal protein S14p/S29e JMUB1235_RS00375 PF00410 Ribosomal protein S8 JMUB1235_RS00380 PF00347 Ribosomal protein L6 JMUB1235_RS00385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JMUB1235_RS00390 PF03719 Ribosomal protein S5, C-terminal domain JMUB1235_RS00390 PF00333 Ribosomal protein S5, N-terminal domain JMUB1235_RS00395 PF00327 Ribosomal protein L30p/L7e JMUB1235_RS00400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JMUB1235_RS00405 PF00344 SecY translocase JMUB1235_RS00415 PF01176 Translation initiation factor 1A / IF-1 JMUB1235_RS00420 PF00444 Ribosomal protein L36 JMUB1235_RS00425 PF00416 Ribosomal protein S13/S18 JMUB1235_RS00430 PF00411 Ribosomal protein S11 JMUB1235_RS00435 PF01000 RNA polymerase Rpb3/RpoA insert domain JMUB1235_RS00435 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JMUB1235_RS00435 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JMUB1235_RS00440 PF01196 Ribosomal protein L17 JMUB1235_RS00530 PF08544 GHMP kinases C terminal JMUB1235_RS00530 PF00288 GHMP kinases N terminal domain JMUB1235_RS00535 PF08544 GHMP kinases C terminal JMUB1235_RS00535 PF00288 GHMP kinases N terminal domain JMUB1235_RS00540 PF08544 GHMP kinases C terminal JMUB1235_RS00540 PF00288 GHMP kinases N terminal domain JMUB1235_RS00545 PF01047 MarR family JMUB1235_RS00550 PF00005 ABC transporter JMUB1235_RS00555 PF00950 ABC 3 transport family JMUB1235_RS00565 PF01479 S4 domain JMUB1235_RS00565 PF00579 tRNA synthetases class I (W and Y) JMUB1235_RS00570 PF00905 Penicillin binding protein transpeptidase domain JMUB1235_RS00570 PF00912 Transglycosylase JMUB1235_RS00575 PF00562 RNA polymerase Rpb2, domain 6 JMUB1235_RS00575 PF04563 RNA polymerase beta subunit JMUB1235_RS00575 PF10385 RNA polymerase beta subunit external 1 domain JMUB1235_RS00575 PF04560 RNA polymerase Rpb2, domain 7 JMUB1235_RS00575 PF04561 RNA polymerase Rpb2, domain 2 JMUB1235_RS00575 PF04565 RNA polymerase Rpb2, domain 3 JMUB1235_RS00580 PF04983 RNA polymerase Rpb1, domain 3 JMUB1235_RS00580 PF05000 RNA polymerase Rpb1, domain 4 JMUB1235_RS00580 PF00623 RNA polymerase Rpb1, domain 2 JMUB1235_RS00580 PF04997 RNA polymerase Rpb1, domain 1 JMUB1235_RS00580 PF04998 RNA polymerase Rpb1, domain 5 JMUB1235_RS00590 PF00437 Type II/IV secretion system protein JMUB1235_RS00595 PF00482 Type II secretion system (T2SS), protein F JMUB1235_RS00600 PF07963 Prokaryotic N-terminal methylation motif JMUB1235_RS00630 PF00871 Acetokinase family JMUB1235_RS00640 PF03807 NADP oxidoreductase coenzyme F420-dependent JMUB1235_RS00640 PF14748 Pyrroline-5-carboxylate reductase dimerisation JMUB1235_RS00645 PF05343 M42 glutamyl aminopeptidase JMUB1235_RS00660 PF00085 Thioredoxin JMUB1235_RS00665 PF14794 Domain of unknown function (DUF4479) JMUB1235_RS00665 PF01588 Putative tRNA binding domain JMUB1235_RS00670 PF00436 Single-strand binding protein family JMUB1235_RS00675 PF01712 Deoxynucleoside kinase JMUB1235_RS00680 PF01207 Dihydrouridine synthase (Dus) JMUB1235_RS00685 PF01430 Hsp33 protein JMUB1235_RS00700 PF17802 Prealbumin-like fold domain JMUB1235_RS00700 PF08341 Thioester domain JMUB1235_RS00710 PF08341 Thioester domain JMUB1235_RS00710 PF17802 Prealbumin-like fold domain JMUB1235_RS00720 PF12892 Spy0128-like isopeptide containing domain JMUB1235_RS00725 PF04203 Sortase domain JMUB1235_RS00750 PF02667 Short chain fatty acid transporter JMUB1235_RS00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMUB1235_RS00755 PF03466 LysR substrate binding domain JMUB1235_RS00760 PF02803 Thiolase, C-terminal domain JMUB1235_RS00760 PF00108 Thiolase, N-terminal domain JMUB1235_RS00765 PF01144 Coenzyme A transferase JMUB1235_RS00770 PF01144 Coenzyme A transferase JMUB1235_RS00780 PF01042 Endoribonuclease L-PSP JMUB1235_RS00795 PF01496 V-type ATPase 116kDa subunit family JMUB1235_RS00800 PF00137 ATP synthase subunit C JMUB1235_RS00810 PF01992 ATP synthase (C/AC39) subunit JMUB1235_RS00815 PF01990 ATP synthase (F/14-kDa) subunit JMUB1235_RS00820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMUB1235_RS00820 PF16886 ATPsynthase alpha/beta subunit N-term extension JMUB1235_RS00820 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMUB1235_RS00825 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMUB1235_RS00825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMUB1235_RS00830 PF01813 ATP synthase subunit D JMUB1235_RS00845 PF00709 Adenylosuccinate synthetase JMUB1235_RS00850 PF02608 ABC transporter substrate-binding protein PnrA-like JMUB1235_RS00855 PF00467 KOW motif JMUB1235_RS00855 PF02357 Transcription termination factor nusG JMUB1235_RS00870 PF17440 Thiol-activated cytolysin beta sandwich domain JMUB1235_RS00870 PF01289 Thiol-activated cytolysin JMUB1235_RS00895 PF01053 Cys/Met metabolism PLP-dependent enzyme JMUB1235_RS00900 PF13603 Leucyl-tRNA synthetase, Domain 2 JMUB1235_RS00900 PF09334 tRNA synthetases class I (M) JMUB1235_RS00900 PF00133 tRNA synthetases class I (I, L, M and V) JMUB1235_RS00900 PF08264 Anticodon-binding domain of tRNA JMUB1235_RS00905 PF03611 PTS system sugar-specific permease component JMUB1235_RS00910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMUB1235_RS00915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMUB1235_RS00920 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JMUB1235_RS00925 PF01261 Xylose isomerase-like TIM barrel JMUB1235_RS00930 PF00596 Class II Aldolase and Adducin N-terminal domain JMUB1235_RS00950 PF00571 CBS domain JMUB1235_RS00950 PF00005 ABC transporter JMUB1235_RS00955 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS00960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JMUB1235_RS00960 PF01367 5'-3' exonuclease, C-terminal SAM fold JMUB1235_RS00960 PF00476 DNA polymerase family A JMUB1235_RS00970 PF01475 Ferric uptake regulator family JMUB1235_RS00980 PF01507 Phosphoadenosine phosphosulfate reductase family JMUB1235_RS00980 PF11922 Domain of unknown function (DUF3440) JMUB1235_RS00985 PF02195 ParB-like nuclease domain JMUB1235_RS00995 PF13333 Integrase core domain JMUB1235_RS00995 PF00665 Integrase core domain JMUB1235_RS00995 PF13276 HTH-like domain JMUB1235_RS01010 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JMUB1235_RS01010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JMUB1235_RS01030 PF01702 Queuine tRNA-ribosyltransferase JMUB1235_RS01040 PF02632 BioY family JMUB1235_RS01045 PF12706 Beta-lactamase superfamily domain JMUB1235_RS01050 PF14437 MafB19-like deaminase JMUB1235_RS01065 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JMUB1235_RS01065 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JMUB1235_RS01070 PF00342 Phosphoglucose isomerase JMUB1235_RS01080 PF01694 Rhomboid family JMUB1235_RS01085 PF00483 Nucleotidyl transferase JMUB1235_RS01090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JMUB1235_RS01090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JMUB1235_RS01100 PF00664 ABC transporter transmembrane region JMUB1235_RS01100 PF00005 ABC transporter JMUB1235_RS01105 PF00664 ABC transporter transmembrane region JMUB1235_RS01105 PF00005 ABC transporter JMUB1235_RS01110 PF02677 Epoxyqueuosine reductase QueH JMUB1235_RS01115 PF00692 dUTPase JMUB1235_RS01120 PF18073 Rubredoxin metal binding domain JMUB1235_RS01125 PF00484 Carbonic anhydrase JMUB1235_RS01130 PF01987 Mitochondrial biogenesis AIM24 JMUB1235_RS01140 PF00749 tRNA synthetases class I (E and Q), catalytic domain JMUB1235_RS01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS01145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JMUB1235_RS01145 PF17203 Single cache domain 3 JMUB1235_RS01145 PF00989 PAS fold JMUB1235_RS01160 PF00825 Ribonuclease P JMUB1235_RS01165 PF02096 60Kd inner membrane protein JMUB1235_RS01170 PF14804 Jag N-terminus JMUB1235_RS01170 PF01424 R3H domain JMUB1235_RS01175 PF00468 Ribosomal protein L34 JMUB1235_RS01180 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JMUB1235_RS01190 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS01195 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS01210 PF00701 Dihydrodipicolinate synthetase family JMUB1235_RS01215 PF00480 ROK family JMUB1235_RS01225 PF01026 TatD related DNase JMUB1235_RS01230 PF13331 Domain of unknown function (DUF4093) JMUB1235_RS01235 PF00398 Ribosomal RNA adenine dimethylase JMUB1235_RS01240 PF16745 RsgA N-terminal domain JMUB1235_RS01240 PF03193 RsgA GTPase JMUB1235_RS01245 PF00834 Ribulose-phosphate 3 epimerase family JMUB1235_RS01250 PF04263 Thiamin pyrophosphokinase, catalytic domain JMUB1235_RS01250 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JMUB1235_RS01255 PF02646 RmuC family JMUB1235_RS01260 PF01966 HD domain JMUB1235_RS01265 PF09182 Bacterial purine repressor, N-terminal JMUB1235_RS01265 PF00156 Phosphoribosyl transferase domain JMUB1235_RS01275 PF00164 Ribosomal protein S12/S23 JMUB1235_RS01280 PF00177 Ribosomal protein S7p/S5e JMUB1235_RS01285 PF03764 Elongation factor G, domain IV JMUB1235_RS01285 PF00009 Elongation factor Tu GTP binding domain JMUB1235_RS01285 PF14492 Elongation Factor G, domain II JMUB1235_RS01285 PF00679 Elongation factor G C-terminus JMUB1235_RS01285 PF03144 Elongation factor Tu domain 2 JMUB1235_RS01290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JMUB1235_RS01290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMUB1235_RS01300 PF00005 ABC transporter JMUB1235_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS01315 PF02673 Bacitracin resistance protein BacA JMUB1235_RS01320 PF05389 Negative regulator of genetic competence (MecA) JMUB1235_RS01325 PF00953 Glycosyl transferase family 4 JMUB1235_RS01330 PF00005 ABC transporter JMUB1235_RS01335 PF01458 Uncharacterized protein family (UPF0051) JMUB1235_RS01340 PF00266 Aminotransferase class-V JMUB1235_RS01345 PF01592 NifU-like N terminal domain JMUB1235_RS01350 PF01458 Uncharacterized protein family (UPF0051) JMUB1235_RS01355 PF07943 Penicillin-binding protein 5, C-terminal domain JMUB1235_RS01355 PF00768 D-alanyl-D-alanine carboxypeptidase JMUB1235_RS01360 PF07943 Penicillin-binding protein 5, C-terminal domain JMUB1235_RS01360 PF00768 D-alanyl-D-alanine carboxypeptidase JMUB1235_RS01365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMUB1235_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS01375 PF12911 N-terminal TM domain of oligopeptide transport permease C JMUB1235_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS01380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMUB1235_RS01380 PF00005 ABC transporter JMUB1235_RS01385 PF00005 ABC transporter JMUB1235_RS01385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMUB1235_RS01435 PF01926 50S ribosome-binding GTPase JMUB1235_RS01440 PF01985 CRS1 / YhbY (CRM) domain JMUB1235_RS01445 PF01467 Cytidylyltransferase-like JMUB1235_RS01450 PF01966 HD domain JMUB1235_RS01460 PF13649 Methyltransferase domain JMUB1235_RS01465 PF05636 HIGH Nucleotidyl Transferase JMUB1235_RS01475 PF01709 Transcriptional regulator JMUB1235_RS01480 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMUB1235_RS01485 PF03180 NLPA lipoprotein JMUB1235_RS01490 PF09383 NIL domain JMUB1235_RS01490 PF00005 ABC transporter JMUB1235_RS01495 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS01500 PF05525 Branched-chain amino acid transport protein JMUB1235_RS01505 PF00375 Sodium:dicarboxylate symporter family JMUB1235_RS01510 PF02080 TrkA-C domain JMUB1235_RS01510 PF02254 TrkA-N domain JMUB1235_RS01515 PF02386 Cation transport protein JMUB1235_RS01520 PF02527 rRNA small subunit methyltransferase G JMUB1235_RS01525 PF04011 LemA family JMUB1235_RS01530 PF01435 Peptidase family M48 JMUB1235_RS01540 PF00072 Response regulator receiver domain JMUB1235_RS01540 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS01545 PF00512 His Kinase A (phospho-acceptor) domain JMUB1235_RS01545 PF18719 ArlS sensor domain JMUB1235_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS01550 PF03477 ATP cone domain JMUB1235_RS01560 PF07319 Primosomal protein DnaI N-terminus JMUB1235_RS01560 PF01695 IstB-like ATP binding protein JMUB1235_RS01565 PF01926 50S ribosome-binding GTPase JMUB1235_RS01565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JMUB1235_RS01570 PF12419 SNF2 Helicase protein JMUB1235_RS01570 PF00271 Helicase conserved C-terminal domain JMUB1235_RS01570 PF00176 SNF2 family N-terminal domain JMUB1235_RS01580 PF02875 Mur ligase family, glutamate ligase domain JMUB1235_RS01580 PF01225 Mur ligase family, catalytic domain JMUB1235_RS01580 PF08245 Mur ligase middle domain JMUB1235_RS01590 PF02618 YceG-like family JMUB1235_RS01595 PF03449 Transcription elongation factor, N-terminal JMUB1235_RS01595 PF01272 Transcription elongation factor, GreA/GreB, C-term JMUB1235_RS01600 PF02096 60Kd inner membrane protein JMUB1235_RS01605 PF00708 Acylphosphatase JMUB1235_RS01610 PF00588 SpoU rRNA Methylase family JMUB1235_RS01610 PF08032 RNA 2'-O ribose methyltransferase substrate binding JMUB1235_RS01620 PF01027 Inhibitor of apoptosis-promoting Bax1 JMUB1235_RS01625 PF03672 Uncharacterised protein family (UPF0154) JMUB1235_RS01630 PF01177 Asp/Glu/Hydantoin racemase JMUB1235_RS01635 PF01725 Ham1 family JMUB1235_RS01650 PF00589 Phage integrase family JMUB1235_RS01655 PF02616 Segregation and condensation protein ScpA JMUB1235_RS01660 PF04079 Segregation and condensation complex subunit ScpB JMUB1235_RS01665 PF00849 RNA pseudouridylate synthase JMUB1235_RS01665 PF01479 S4 domain JMUB1235_RS01670 PF01809 Putative membrane protein insertion efficiency factor JMUB1235_RS01675 PF00588 SpoU rRNA Methylase family JMUB1235_RS01680 PF12822 ECF transporter, substrate-specific component JMUB1235_RS01685 PF01569 PAP2 superfamily JMUB1235_RS01690 PF16199 Radical_SAM C-terminal domain JMUB1235_RS01690 PF04055 Radical SAM superfamily JMUB1235_RS01695 PF06962 Putative rRNA methylase JMUB1235_RS01700 PF03471 Transporter associated domain JMUB1235_RS01700 PF00571 CBS domain JMUB1235_RS01700 PF01595 Cyclin M transmembrane N-terminal domain JMUB1235_RS01705 PF04055 Radical SAM superfamily JMUB1235_RS01710 PF01368 DHH family JMUB1235_RS01710 PF02833 DHHA2 domain JMUB1235_RS01720 PF01032 FecCD transport family JMUB1235_RS01725 PF01032 FecCD transport family JMUB1235_RS01730 PF01497 Periplasmic binding protein JMUB1235_RS01735 PF00005 ABC transporter JMUB1235_RS01740 PF08245 Mur ligase middle domain JMUB1235_RS01740 PF02875 Mur ligase family, glutamate ligase domain JMUB1235_RS01745 PF14667 Polysaccharide biosynthesis C-terminal domain JMUB1235_RS01745 PF01943 Polysaccharide biosynthesis protein JMUB1235_RS01760 PF00574 Clp protease JMUB1235_RS01765 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JMUB1235_RS01770 PF02223 Thymidylate kinase JMUB1235_RS01775 PF09115 DNA polymerase III, delta subunit, C terminal JMUB1235_RS01785 PF06156 Initiation control protein YabA JMUB1235_RS01790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMUB1235_RS01800 PF03932 CutC family JMUB1235_RS01805 PF03960 ArsC family JMUB1235_RS01810 PF03372 Endonuclease/Exonuclease/phosphatase family JMUB1235_RS01820 PF01070 FMN-dependent dehydrogenase JMUB1235_RS01825 PF06280 Fn3-like domain JMUB1235_RS01825 PF00082 Subtilase family JMUB1235_RS01825 PF00746 LPXTG cell wall anchor motif JMUB1235_RS01825 PF02225 PA domain JMUB1235_RS01845 PF01588 Putative tRNA binding domain JMUB1235_RS01845 PF09334 tRNA synthetases class I (M) JMUB1235_RS01850 PF00268 Ribonucleotide reductase, small chain JMUB1235_RS01855 PF07972 NrdI Flavodoxin like JMUB1235_RS01860 PF08343 Ribonucleotide reductase N-terminal JMUB1235_RS01860 PF02867 Ribonucleotide reductase, barrel domain JMUB1235_RS01860 PF00317 Ribonucleotide reductase, all-alpha domain JMUB1235_RS01870 PF03496 ADP-ribosyltransferase exoenzyme JMUB1235_RS01955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMUB1235_RS01955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMUB1235_RS01960 PF07690 Major Facilitator Superfamily JMUB1235_RS01965 PF00132 Bacterial transferase hexapeptide (six repeats) JMUB1235_RS01965 PF12804 MobA-like NTP transferase domain JMUB1235_RS01965 PF14602 Hexapeptide repeat of succinyl-transferase JMUB1235_RS01970 PF00293 NUDIX domain JMUB1235_RS01980 PF01048 Phosphorylase superfamily JMUB1235_RS01995 PF01297 Zinc-uptake complex component A periplasmic JMUB1235_RS02000 PF00005 ABC transporter JMUB1235_RS02005 PF00950 ABC 3 transport family JMUB1235_RS02010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JMUB1235_RS02015 PF01580 FtsK/SpoIIIE family JMUB1235_RS02015 PF09397 Ftsk gamma domain JMUB1235_RS02015 PF17854 FtsK alpha domain JMUB1235_RS02025 PF13808 DDE_Tnp_1-associated JMUB1235_RS02025 PF01609 Transposase DDE domain JMUB1235_RS02035 PF00298 Ribosomal protein L11, RNA binding domain JMUB1235_RS02035 PF03946 Ribosomal protein L11, N-terminal domain JMUB1235_RS02040 PF00687 Ribosomal protein L1p/L10e family JMUB1235_RS02045 PF00696 Amino acid kinase family JMUB1235_RS02050 PF01765 Ribosome recycling factor JMUB1235_RS02060 PF01625 Peptide methionine sulfoxide reductase JMUB1235_RS02065 PF06855 YozE SAM-like fold JMUB1235_RS02075 PF06100 MCRA family JMUB1235_RS02080 PF02562 PhoH-like protein JMUB1235_RS02085 PF03167 Uracil DNA glycosylase superfamily JMUB1235_RS02090 PF02130 Uncharacterized protein family UPF0054 JMUB1235_RS02095 PF01219 Prokaryotic diacylglycerol kinase JMUB1235_RS02100 PF07650 KH domain JMUB1235_RS02100 PF01926 50S ribosome-binding GTPase JMUB1235_RS02105 PF13344 Haloacid dehalogenase-like hydrolase JMUB1235_RS02105 PF00293 NUDIX domain JMUB1235_RS02180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JMUB1235_RS02180 PF06827 Zinc finger found in FPG and IleRS JMUB1235_RS02180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JMUB1235_RS02185 PF01121 Dephospho-CoA kinase JMUB1235_RS02190 PF05872 Bacterial protein of unknown function (DUF853) JMUB1235_RS02195 PF00083 Sugar (and other) transporter JMUB1235_RS02195 PF07690 Major Facilitator Superfamily JMUB1235_RS02200 PF00471 Ribosomal protein L33 JMUB1235_RS02210 PF00575 S1 RNA binding domain JMUB1235_RS02210 PF00773 RNB domain JMUB1235_RS02210 PF08206 Ribonuclease B OB domain JMUB1235_RS02210 PF17876 Cold shock domain JMUB1235_RS02215 PF01668 SmpB protein JMUB1235_RS02225 PF01470 Pyroglutamyl peptidase JMUB1235_RS02240 PF00535 Glycosyl transferase family 2 JMUB1235_RS02245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMUB1235_RS02250 PF00881 Nitroreductase family JMUB1235_RS02255 PF01321 Creatinase/Prolidase N-terminal domain JMUB1235_RS02255 PF00557 Metallopeptidase family M24 JMUB1235_RS02260 PF00356 Bacterial regulatory proteins, lacI family JMUB1235_RS02265 PF00534 Glycosyl transferases group 1 JMUB1235_RS02265 PF13439 Glycosyltransferase Family 4 JMUB1235_RS02270 PF00534 Glycosyl transferases group 1 JMUB1235_RS02270 PF13439 Glycosyltransferase Family 4 JMUB1235_RS02275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMUB1235_RS02275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMUB1235_RS02275 PF02824 TGS domain JMUB1235_RS02275 PF03129 Anticodon binding domain JMUB1235_RS02280 PF00005 ABC transporter JMUB1235_RS02300 PF02803 Thiolase, C-terminal domain JMUB1235_RS02300 PF00108 Thiolase, N-terminal domain JMUB1235_RS02315 PF00072 Response regulator receiver domain JMUB1235_RS02315 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS02320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS02320 PF00672 HAMP domain JMUB1235_RS02320 PF13426 PAS domain JMUB1235_RS02320 PF00512 His Kinase A (phospho-acceptor) domain JMUB1235_RS02325 PF00753 Metallo-beta-lactamase superfamily JMUB1235_RS02330 PF00035 Double-stranded RNA binding motif JMUB1235_RS02330 PF14622 Ribonuclease-III-like JMUB1235_RS02335 PF06470 SMC proteins Flexible Hinge Domain JMUB1235_RS02335 PF02463 RecF/RecN/SMC N terminal domain JMUB1235_RS02345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JMUB1235_RS02345 PF08501 Shikimate dehydrogenase substrate binding domain JMUB1235_RS02365 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) JMUB1235_RS02385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JMUB1235_RS02385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JMUB1235_RS02385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JMUB1235_RS02430 PF04860 Phage portal protein JMUB1235_RS02450 PF00448 SRP54-type protein, GTPase domain JMUB1235_RS02450 PF02881 SRP54-type protein, helical bundle domain JMUB1235_RS02455 PF07690 Major Facilitator Superfamily JMUB1235_RS02460 PF00874 PRD domain JMUB1235_RS02460 PF03123 CAT RNA binding domain JMUB1235_RS02465 PF02378 Phosphotransferase system, EIIC JMUB1235_RS02465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMUB1235_RS02465 PF00367 phosphotransferase system, EIIB JMUB1235_RS02470 PF00232 Glycosyl hydrolase family 1 JMUB1235_RS02475 PF09323 Domain of unknown function (DUF1980) JMUB1235_RS02480 PF03773 Predicted permease JMUB1235_RS02490 PF17674 HHH domain JMUB1235_RS02490 PF00575 S1 RNA binding domain JMUB1235_RS02490 PF09371 Tex-like protein N-terminal domain JMUB1235_RS02490 PF16921 Tex protein YqgF-like domain JMUB1235_RS02495 PF10263 SprT-like family JMUB1235_RS02505 PF07475 HPr Serine kinase C-terminal domain JMUB1235_RS02505 PF02603 HPr Serine kinase N terminus JMUB1235_RS02510 PF01790 Prolipoprotein diacylglyceryl transferase JMUB1235_RS02520 PF12732 YtxH-like protein JMUB1235_RS02535 PF16325 Peptidase family U32 C-terminal domain JMUB1235_RS02535 PF01136 Peptidase family U32 JMUB1235_RS02540 PF02229 Transcriptional Coactivator p15 (PC4) JMUB1235_RS02550 PF01336 OB-fold nucleic acid binding domain JMUB1235_RS02550 PF00152 tRNA synthetases class II (D, K and N) JMUB1235_RS02570 PF09515 Thiamine transporter protein (Thia_YuaJ) JMUB1235_RS02590 PF00255 Glutathione peroxidase JMUB1235_RS02595 PF08439 Oligopeptidase F JMUB1235_RS02595 PF01432 Peptidase family M3 JMUB1235_RS02600 PF00311 Phosphoenolpyruvate carboxylase JMUB1235_RS02605 PF01098 Cell cycle protein JMUB1235_RS02610 PF00009 Elongation factor Tu GTP binding domain JMUB1235_RS02610 PF03144 Elongation factor Tu domain 2 JMUB1235_RS02610 PF03143 Elongation factor Tu C-terminal domain JMUB1235_RS02615 PF00121 Triosephosphate isomerase JMUB1235_RS02640 PF01966 HD domain JMUB1235_RS02650 PF00689 Cation transporting ATPase, C-terminus JMUB1235_RS02650 PF00690 Cation transporter/ATPase, N-terminus JMUB1235_RS02655 PF00356 Bacterial regulatory proteins, lacI family JMUB1235_RS02665 PF03613 PTS system mannose/fructose/sorbose family IID component JMUB1235_RS02670 PF03609 PTS system sorbose-specific iic component JMUB1235_RS02675 PF03830 PTS system sorbose subfamily IIB component JMUB1235_RS02680 PF07470 Glycosyl Hydrolase Family 88 JMUB1235_RS02705 PF01081 KDPG and KHG aldolase JMUB1235_RS02715 PF08331 Domain of unknown function (DUF1730) JMUB1235_RS02725 PF00005 ABC transporter JMUB1235_RS02730 PF02687 FtsX-like permease family JMUB1235_RS02730 PF18075 FtsX extracellular domain JMUB1235_RS02735 PF00753 Metallo-beta-lactamase superfamily JMUB1235_RS02745 PF00929 Exonuclease JMUB1235_RS02745 PF04851 Type III restriction enzyme, res subunit JMUB1235_RS02745 PF13307 Helicase C-terminal domain JMUB1235_RS02750 PF00155 Aminotransferase class I and II JMUB1235_RS02755 PF01336 OB-fold nucleic acid binding domain JMUB1235_RS02755 PF00152 tRNA synthetases class II (D, K and N) JMUB1235_RS02760 PF03668 P-loop ATPase protein family JMUB1235_RS02765 PF01933 Uncharacterised protein family UPF0052 JMUB1235_RS02770 PF02650 WhiA C-terminal HTH domain JMUB1235_RS02770 PF14527 WhiA LAGLIDADG-like domain JMUB1235_RS02770 PF10298 WhiA N-terminal LAGLIDADG-like domain JMUB1235_RS02775 PF00239 Resolvase, N terminal domain JMUB1235_RS02775 PF02796 Helix-turn-helix domain of resolvase JMUB1235_RS02890 PF02195 ParB-like nuclease domain JMUB1235_RS02925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMUB1235_RS02925 PF13457 GW (Gly-Tryp) dipeptide domain JMUB1235_RS02930 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JMUB1235_RS02930 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JMUB1235_RS02940 PF03577 Peptidase family C69 JMUB1235_RS02945 PF01297 Zinc-uptake complex component A periplasmic JMUB1235_RS02945 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JMUB1235_RS02950 PF07702 UTRA domain JMUB1235_RS02950 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS02955 PF01380 SIS domain JMUB1235_RS02960 PF01197 Ribosomal protein L31 JMUB1235_RS02965 PF02272 DHHA1 domain JMUB1235_RS02965 PF01368 DHH family JMUB1235_RS02970 PF00258 Flavodoxin JMUB1235_RS02980 PF00654 Voltage gated chloride channel JMUB1235_RS02985 PF01245 Ribosomal protein L19 JMUB1235_RS03000 PF00986 DNA gyrase B subunit, carboxyl terminus JMUB1235_RS03000 PF01751 Toprim domain JMUB1235_RS03000 PF00204 DNA gyrase B JMUB1235_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS03005 PF06160 Septation ring formation regulator, EzrA JMUB1235_RS03015 PF00113 Enolase, C-terminal TIM barrel domain JMUB1235_RS03015 PF03952 Enolase, N-terminal domain JMUB1235_RS03050 PF00005 ABC transporter JMUB1235_RS03075 PF06177 QueT transporter JMUB1235_RS03080 PF12826 Helix-hairpin-helix motif JMUB1235_RS03080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JMUB1235_RS03080 PF03120 NAD-dependent DNA ligase OB-fold domain JMUB1235_RS03080 PF01653 NAD-dependent DNA ligase adenylation domain JMUB1235_RS03080 PF00533 BRCA1 C Terminus (BRCT) domain JMUB1235_RS03085 PF00781 Diacylglycerol kinase catalytic domain JMUB1235_RS03090 PF00137 ATP synthase subunit C JMUB1235_RS03095 PF00119 ATP synthase A chain JMUB1235_RS03100 PF00430 ATP synthase B/B' CF(0) JMUB1235_RS03105 PF00213 ATP synthase delta (OSCP) subunit JMUB1235_RS03110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMUB1235_RS03110 PF00306 ATP synthase alpha/beta chain, C terminal domain JMUB1235_RS03110 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMUB1235_RS03115 PF00231 ATP synthase JMUB1235_RS03120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMUB1235_RS03120 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMUB1235_RS03125 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JMUB1235_RS03125 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JMUB1235_RS03135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMUB1235_RS03145 PF01223 DNA/RNA non-specific endonuclease JMUB1235_RS03150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JMUB1235_RS03150 PF01409 tRNA synthetases class II core domain (F) JMUB1235_RS03155 PF03483 B3/4 domain JMUB1235_RS03155 PF03147 Ferredoxin-fold anticodon binding domain JMUB1235_RS03155 PF03484 tRNA synthetase B5 domain JMUB1235_RS03155 PF01588 Putative tRNA binding domain JMUB1235_RS03155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JMUB1235_RS03170 PF02687 FtsX-like permease family JMUB1235_RS03175 PF00005 ABC transporter JMUB1235_RS03180 PF04228 Putative neutral zinc metallopeptidase JMUB1235_RS03185 PF12705 PD-(D/E)XK nuclease superfamily JMUB1235_RS03190 PF12705 PD-(D/E)XK nuclease superfamily JMUB1235_RS03190 PF00580 UvrD/REP helicase N-terminal domain JMUB1235_RS03190 PF13361 UvrD-like helicase C-terminal domain JMUB1235_RS03195 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMUB1235_RS03200 PF01165 Ribosomal protein S21 JMUB1235_RS03205 PF01741 Large-conductance mechanosensitive channel, MscL JMUB1235_RS03210 PF10410 DnaB-helicase binding domain of primase JMUB1235_RS03210 PF08275 DNA primase catalytic core, N-terminal domain JMUB1235_RS03210 PF01807 CHC2 zinc finger JMUB1235_RS03215 PF03979 Sigma-70 factor, region 1.1 JMUB1235_RS03215 PF00140 Sigma-70 factor, region 1.2 JMUB1235_RS03215 PF04545 Sigma-70, region 4 JMUB1235_RS03215 PF04539 Sigma-70 region 3 JMUB1235_RS03215 PF04542 Sigma-70 region 2 JMUB1235_RS03220 PF01883 Iron-sulfur cluster assembly protein JMUB1235_RS03225 PF04321 RmlD substrate binding domain JMUB1235_RS03235 PF00535 Glycosyl transferase family 2 JMUB1235_RS03235 PF02709 N-terminal domain of galactosyltransferase JMUB1235_RS03245 PF00005 ABC transporter JMUB1235_RS03250 PF00535 Glycosyl transferase family 2 JMUB1235_RS03265 PF00535 Glycosyl transferase family 2 JMUB1235_RS03285 PF01546 Peptidase family M20/M25/M40 JMUB1235_RS03285 PF07687 Peptidase dimerisation domain JMUB1235_RS03305 PF02224 Cytidylate kinase JMUB1235_RS03310 PF05198 Translation initiation factor IF-3, N-terminal domain JMUB1235_RS03310 PF00707 Translation initiation factor IF-3, C-terminal domain JMUB1235_RS03315 PF01632 Ribosomal protein L35 JMUB1235_RS03320 PF00453 Ribosomal protein L20 JMUB1235_RS03325 PF00884 Sulfatase JMUB1235_RS03330 PF10672 S-adenosylmethionine-dependent methyltransferase JMUB1235_RS03330 PF17785 PUA-like domain JMUB1235_RS03335 PF01487 Type I 3-dehydroquinase JMUB1235_RS03340 PF01264 Chorismate synthase JMUB1235_RS03345 PF06133 Control of competence regulator ComK, YlbF/YmcA JMUB1235_RS03350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMUB1235_RS03350 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS03355 PF02875 Mur ligase family, glutamate ligase domain JMUB1235_RS03355 PF08245 Mur ligase middle domain JMUB1235_RS03365 PF00266 Aminotransferase class-V JMUB1235_RS03370 PF02926 THUMP domain JMUB1235_RS03370 PF02568 Thiamine biosynthesis protein (ThiI) JMUB1235_RS03375 PF09587 Bacterial capsule synthesis protein PGA_cap JMUB1235_RS03380 PF00829 Ribosomal prokaryotic L21 protein JMUB1235_RS03390 PF01016 Ribosomal L27 protein JMUB1235_RS03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMUB1235_RS03400 PF03466 LysR substrate binding domain JMUB1235_RS03405 PF01252 Signal peptidase (SPase) II JMUB1235_RS03410 PF00849 RNA pseudouridylate synthase JMUB1235_RS03410 PF01479 S4 domain JMUB1235_RS03415 PF00156 Phosphoribosyl transferase domain JMUB1235_RS03420 PF00860 Permease family JMUB1235_RS03425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JMUB1235_RS03425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JMUB1235_RS03430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JMUB1235_RS03430 PF00117 Glutamine amidotransferase class-I JMUB1235_RS03440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JMUB1235_RS03440 PF02142 MGS-like domain JMUB1235_RS03440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMUB1235_RS03445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JMUB1235_RS03450 PF00005 ABC transporter JMUB1235_RS03455 PF12704 MacB-like periplasmic core domain JMUB1235_RS03455 PF02687 FtsX-like permease family JMUB1235_RS03460 PF03009 Glycerophosphoryl diester phosphodiesterase family JMUB1235_RS03465 PF00886 Ribosomal protein S16 JMUB1235_RS03495 PF01782 RimM N-terminal domain JMUB1235_RS03495 PF05239 PRC-barrel domain JMUB1235_RS03500 PF01746 tRNA (Guanine-1)-methyltransferase JMUB1235_RS03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS03515 PF02558 Ketopantoate reductase PanE/ApbA JMUB1235_RS03515 PF08546 Ketopantoate reductase PanE/ApbA C terminal JMUB1235_RS03520 PF00455 DeoR C terminal sensor domain JMUB1235_RS03520 PF08220 DeoR-like helix-turn-helix domain JMUB1235_RS03525 PF00294 pfkB family carbohydrate kinase JMUB1235_RS03530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMUB1235_RS03530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMUB1235_RS03535 PF01476 LysM domain JMUB1235_RS03535 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMUB1235_RS03540 PF01476 LysM domain JMUB1235_RS03540 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMUB1235_RS03550 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JMUB1235_RS03550 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JMUB1235_RS03555 PF09028 Mac 1 JMUB1235_RS03560 PF00334 Nucleoside diphosphate kinase JMUB1235_RS03570 PF02645 Uncharacterised protein, DegV family COG1307 JMUB1235_RS03575 PF13735 tRNA nucleotidyltransferase domain 2 putative JMUB1235_RS03575 PF12627 Probable RNA and SrmB- binding site of polymerase A JMUB1235_RS03575 PF01743 Poly A polymerase head domain JMUB1235_RS03580 PF12848 ABC transporter JMUB1235_RS03580 PF00005 ABC transporter JMUB1235_RS03580 PF16326 ABC transporter C-terminal domain JMUB1235_RS03590 PF01327 Polypeptide deformylase JMUB1235_RS03600 PF04607 Region found in RelA / SpoT proteins JMUB1235_RS03605 PF00072 Response regulator receiver domain JMUB1235_RS03605 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS03610 PF00512 His Kinase A (phospho-acceptor) domain JMUB1235_RS03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS03615 PF00288 GHMP kinases N terminal domain JMUB1235_RS03615 PF08544 GHMP kinases C terminal JMUB1235_RS03615 PF10509 Galactokinase galactose-binding signature JMUB1235_RS03625 PF00288 GHMP kinases N terminal domain JMUB1235_RS03625 PF08544 GHMP kinases C terminal JMUB1235_RS03630 PF01070 FMN-dependent dehydrogenase JMUB1235_RS03635 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JMUB1235_RS03640 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JMUB1235_RS03640 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JMUB1235_RS03645 PF00303 Thymidylate synthase JMUB1235_RS03650 PF00186 Dihydrofolate reductase JMUB1235_RS03660 PF07724 AAA domain (Cdc48 subfamily) JMUB1235_RS03660 PF10431 C-terminal, D2-small domain, of ClpB protein JMUB1235_RS03660 PF06689 ClpX C4-type zinc finger JMUB1235_RS03665 PF01926 50S ribosome-binding GTPase JMUB1235_RS03675 PF07724 AAA domain (Cdc48 subfamily) JMUB1235_RS03675 PF00004 ATPase family associated with various cellular activities (AAA) JMUB1235_RS03675 PF17871 AAA lid domain JMUB1235_RS03675 PF10431 C-terminal, D2-small domain, of ClpB protein JMUB1235_RS03680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JMUB1235_RS03685 PF01676 Metalloenzyme superfamily JMUB1235_RS03690 PF03960 ArsC family JMUB1235_RS03695 PF01048 Phosphorylase superfamily JMUB1235_RS03700 PF01048 Phosphorylase superfamily JMUB1235_RS03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMUB1235_RS03710 PF03466 LysR substrate binding domain JMUB1235_RS03720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JMUB1235_RS03725 PF00156 Phosphoribosyl transferase domain JMUB1235_RS03730 PF01425 Amidase JMUB1235_RS03735 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMUB1235_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS03745 PF03167 Uracil DNA glycosylase superfamily JMUB1235_RS03750 PF01979 Amidohydrolase family JMUB1235_RS03755 PF02660 Glycerol-3-phosphate acyltransferase JMUB1235_RS03760 PF00204 DNA gyrase B JMUB1235_RS03760 PF00986 DNA gyrase B subunit, carboxyl terminus JMUB1235_RS03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS03760 PF01751 Toprim domain JMUB1235_RS03765 PF03989 DNA gyrase C-terminal domain, beta-propeller JMUB1235_RS03765 PF00521 DNA gyrase/topoisomerase IV, subunit A JMUB1235_RS03770 PF01063 Amino-transferase class IV JMUB1235_RS03790 PF00575 S1 RNA binding domain JMUB1235_RS03805 PF00581 Rhodanese-like domain JMUB1235_RS03805 PF12368 Rhodanase C-terminal JMUB1235_RS03805 PF17773 UPF0176 acylphosphatase like domain JMUB1235_RS03835 PF16360 GTP-binding GTPase Middle Region JMUB1235_RS03835 PF13167 GTP-binding GTPase N-terminal JMUB1235_RS03835 PF01926 50S ribosome-binding GTPase JMUB1235_RS03840 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JMUB1235_RS03840 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JMUB1235_RS03845 PF12706 Beta-lactamase superfamily domain JMUB1235_RS03845 PF00753 Metallo-beta-lactamase superfamily JMUB1235_RS03850 PF00106 short chain dehydrogenase JMUB1235_RS03855 PF01368 DHH family JMUB1235_RS03855 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JMUB1235_RS03855 PF17768 RecJ OB domain JMUB1235_RS03855 PF02272 DHHA1 domain JMUB1235_RS03860 PF00156 Phosphoribosyl transferase domain JMUB1235_RS03870 PF10576 Iron-sulfur binding domain of endonuclease III JMUB1235_RS03870 PF00633 Helix-hairpin-helix motif JMUB1235_RS03870 PF00730 HhH-GPD superfamily base excision DNA repair protein JMUB1235_RS03875 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JMUB1235_RS03880 PF01784 NIF3 (NGG1p interacting factor 3) JMUB1235_RS03885 PF01266 FAD dependent oxidoreductase JMUB1235_RS03890 PF00483 Nucleotidyl transferase JMUB1235_RS03895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JMUB1235_RS03900 PF16363 GDP-mannose 4,6 dehydratase JMUB1235_RS03905 PF00293 NUDIX domain JMUB1235_RS03910 PF01594 AI-2E family transporter JMUB1235_RS03920 PF05670 NFACT protein RNA binding domain JMUB1235_RS03940 PF00005 ABC transporter JMUB1235_RS03945 PF17770 Ribonuclease J C-terminal domain JMUB1235_RS03945 PF00753 Metallo-beta-lactamase superfamily JMUB1235_RS03945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JMUB1235_RS03950 PF00756 Putative esterase JMUB1235_RS03960 PF00005 ABC transporter JMUB1235_RS03960 PF12848 ABC transporter JMUB1235_RS03960 PF16326 ABC transporter C-terminal domain JMUB1235_RS03965 PF00676 Dehydrogenase E1 component JMUB1235_RS03970 PF02779 Transketolase, pyrimidine binding domain JMUB1235_RS03970 PF02780 Transketolase, C-terminal domain JMUB1235_RS03970 PF00364 Biotin-requiring enzyme JMUB1235_RS03975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JMUB1235_RS03975 PF02817 e3 binding domain JMUB1235_RS03975 PF00364 Biotin-requiring enzyme JMUB1235_RS03985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMUB1235_RS03985 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS03995 PF02278 Polysaccharide lyase family 8, super-sandwich domain JMUB1235_RS03995 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain JMUB1235_RS03995 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain JMUB1235_RS04000 PF10437 Bacterial lipoate protein ligase C-terminus JMUB1235_RS04000 PF03099 Biotin/lipoate A/B protein ligase family JMUB1235_RS04005 PF07685 CobB/CobQ-like glutamine amidotransferase domain JMUB1235_RS04010 PF08245 Mur ligase middle domain JMUB1235_RS04010 PF08353 Domain of unknown function (DUF1727) JMUB1235_RS04015 PF02457 DisA bacterial checkpoint controller nucleotide-binding JMUB1235_RS04025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMUB1235_RS04025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMUB1235_RS04025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMUB1235_RS04025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMUB1235_RS04035 PF04055 Radical SAM superfamily JMUB1235_RS04035 PF06969 HemN C-terminal domain JMUB1235_RS04045 PF13344 Haloacid dehalogenase-like hydrolase JMUB1235_RS04060 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 JMUB1235_RS04060 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 JMUB1235_RS04060 PF13395 HNH endonuclease JMUB1235_RS04060 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 JMUB1235_RS04065 PF01867 CRISPR associated protein Cas1 JMUB1235_RS04070 PF09827 CRISPR associated protein Cas2 JMUB1235_RS04075 PF09711 CRISPR-associated protein (Cas_Csn2) JMUB1235_RS04085 PF00334 Nucleoside diphosphate kinase JMUB1235_RS04090 PF03144 Elongation factor Tu domain 2 JMUB1235_RS04090 PF00679 Elongation factor G C-terminus JMUB1235_RS04090 PF14492 Elongation Factor G, domain II JMUB1235_RS04090 PF00009 Elongation factor Tu GTP binding domain JMUB1235_RS04090 PF06421 GTP-binding protein LepA C-terminus JMUB1235_RS04095 PF00746 LPXTG cell wall anchor motif JMUB1235_RS04095 PF02370 M protein repeat JMUB1235_RS04100 PF01641 SelR domain JMUB1235_RS04105 PF03601 Conserved hypothetical protein 698 JMUB1235_RS04115 PF03830 PTS system sorbose subfamily IIB component JMUB1235_RS04120 PF03609 PTS system sorbose-specific iic component JMUB1235_RS04125 PF03613 PTS system mannose/fructose/sorbose family IID component JMUB1235_RS04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS04130 PF06580 Histidine kinase JMUB1235_RS04135 PF00072 Response regulator receiver domain JMUB1235_RS04135 PF12833 Helix-turn-helix domain JMUB1235_RS04145 PF00171 Aldehyde dehydrogenase family JMUB1235_RS04150 PF01541 GIY-YIG catalytic domain JMUB1235_RS04150 PF02151 UvrB/uvrC motif JMUB1235_RS04150 PF08459 UvrC Helix-hairpin-helix N-terminal JMUB1235_RS04155 PF00881 Nitroreductase family JMUB1235_RS04160 PF01546 Peptidase family M20/M25/M40 JMUB1235_RS04165 PF10396 GTP-binding protein TrmE N-terminus JMUB1235_RS04165 PF01926 50S ribosome-binding GTPase JMUB1235_RS04165 PF12631 MnmE helical domain JMUB1235_RS04175 PF00466 Ribosomal protein L10 JMUB1235_RS04180 PF16320 Ribosomal protein L7/L12 dimerisation domain JMUB1235_RS04180 PF00542 Ribosomal protein L7/L12 C-terminal domain JMUB1235_RS04210 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS04210 PF00072 Response regulator receiver domain JMUB1235_RS04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS04215 PF00512 His Kinase A (phospho-acceptor) domain JMUB1235_RS04230 PF05147 Lanthionine synthetase C-like protein JMUB1235_RS04235 PF04738 Lantibiotic dehydratase, N terminus JMUB1235_RS04235 PF14028 Lantibiotic biosynthesis dehydratase C-term JMUB1235_RS04245 PF00005 ABC transporter JMUB1235_RS04280 PF00768 D-alanyl-D-alanine carboxypeptidase JMUB1235_RS04280 PF07943 Penicillin-binding protein 5, C-terminal domain JMUB1235_RS04290 PF02875 Mur ligase family, glutamate ligase domain JMUB1235_RS04290 PF08245 Mur ligase middle domain JMUB1235_RS04295 PF01227 GTP cyclohydrolase I JMUB1235_RS04300 PF00809 Pterin binding enzyme JMUB1235_RS04305 PF02152 Dihydroneopterin aldolase JMUB1235_RS04310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JMUB1235_RS04315 PF01565 FAD binding domain JMUB1235_RS04315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JMUB1235_RS04320 PF00005 ABC transporter JMUB1235_RS04320 PF08402 TOBE domain JMUB1235_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS04335 PF13416 Bacterial extracellular solute-binding protein JMUB1235_RS04340 PF00072 Response regulator receiver domain JMUB1235_RS04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS04345 PF00989 PAS fold JMUB1235_RS04345 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JMUB1235_RS04345 PF17203 Single cache domain 3 JMUB1235_RS04355 PF00107 Zinc-binding dehydrogenase JMUB1235_RS04355 PF08240 Alcohol dehydrogenase GroES-like domain JMUB1235_RS04355 PF13823 Alcohol dehydrogenase GroES-associated JMUB1235_RS04360 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JMUB1235_RS04365 PF00654 Voltage gated chloride channel JMUB1235_RS04375 PF01594 AI-2E family transporter JMUB1235_RS04380 PF04002 RadC-like JAB domain JMUB1235_RS04385 PF07722 Peptidase C26 JMUB1235_RS04390 PF02629 CoA binding domain JMUB1235_RS04390 PF06971 Putative DNA-binding protein N-terminus JMUB1235_RS04400 PF00266 Aminotransferase class-V JMUB1235_RS04405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JMUB1235_RS04405 PF14572 Phosphoribosyl synthetase-associated domain JMUB1235_RS04415 PF04607 Region found in RelA / SpoT proteins JMUB1235_RS04420 PF01513 ATP-NAD kinase JMUB1235_RS04425 PF01479 S4 domain JMUB1235_RS04425 PF00849 RNA pseudouridylate synthase JMUB1235_RS04430 PF01515 Phosphate acetyl/butaryl transferase JMUB1235_RS04435 PF00106 short chain dehydrogenase JMUB1235_RS04445 PF00571 CBS domain JMUB1235_RS04445 PF00005 ABC transporter JMUB1235_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS04455 PF00478 IMP dehydrogenase / GMP reductase domain JMUB1235_RS04465 PF00156 Phosphoribosyl transferase domain JMUB1235_RS04470 PF00860 Permease family JMUB1235_RS04475 PF02424 ApbE family JMUB1235_RS04480 PF01361 Tautomerase enzyme JMUB1235_RS04485 PF00265 Thymidine kinase JMUB1235_RS04490 PF03462 PCRF domain JMUB1235_RS04490 PF00472 RF-1 domain JMUB1235_RS04495 PF05175 Methyltransferase small domain JMUB1235_RS04510 PF00464 Serine hydroxymethyltransferase JMUB1235_RS04525 PF00664 ABC transporter transmembrane region JMUB1235_RS04525 PF00005 ABC transporter JMUB1235_RS04530 PF00664 ABC transporter transmembrane region JMUB1235_RS04530 PF00005 ABC transporter JMUB1235_RS04535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMUB1235_RS04535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS04540 PF00056 lactate/malate dehydrogenase, NAD binding domain JMUB1235_RS04540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JMUB1235_RS04545 PF03989 DNA gyrase C-terminal domain, beta-propeller JMUB1235_RS04545 PF00521 DNA gyrase/topoisomerase IV, subunit A JMUB1235_RS04550 PF04203 Sortase domain JMUB1235_RS04555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMUB1235_RS04575 PF03006 Haemolysin-III related JMUB1235_RS04585 PF01926 50S ribosome-binding GTPase JMUB1235_RS04590 PF01351 Ribonuclease HII JMUB1235_RS04595 PF18255 DNA processing protein A sterile alpha motif domain JMUB1235_RS04595 PF02481 DNA recombination-mediator protein A JMUB1235_RS04600 PF01131 DNA topoisomerase JMUB1235_RS04600 PF01396 Topoisomerase DNA binding C4 zinc finger JMUB1235_RS04600 PF01751 Toprim domain JMUB1235_RS04620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMUB1235_RS04620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMUB1235_RS04635 PF01134 Glucose inhibited division protein A JMUB1235_RS04640 PF00682 HMGL-like JMUB1235_RS04640 PF02436 Conserved carboxylase domain JMUB1235_RS04640 PF00364 Biotin-requiring enzyme JMUB1235_RS04650 PF00364 Biotin-requiring enzyme JMUB1235_RS04655 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JMUB1235_RS04660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JMUB1235_RS04670 PF03600 Citrate transporter JMUB1235_RS04680 PF00364 Biotin-requiring enzyme JMUB1235_RS04685 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JMUB1235_RS04690 PF06857 Malonate decarboxylase delta subunit (MdcD) JMUB1235_RS04695 PF03328 HpcH/HpaI aldolase/citrate lyase family JMUB1235_RS04700 PF04223 Citrate lyase, alpha subunit (CitF) JMUB1235_RS04705 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JMUB1235_RS04710 PF00682 HMGL-like JMUB1235_RS04710 PF00364 Biotin-requiring enzyme JMUB1235_RS04710 PF02436 Conserved carboxylase domain JMUB1235_RS04715 PF08218 Citrate lyase ligase C-terminal domain JMUB1235_RS04725 PF13495 Phage integrase, N-terminal SAM-like domain JMUB1235_RS04725 PF00589 Phage integrase family JMUB1235_RS04735 PF00448 SRP54-type protein, GTPase domain JMUB1235_RS04735 PF02881 SRP54-type protein, helical bundle domain JMUB1235_RS04735 PF02978 Signal peptide binding domain JMUB1235_RS04740 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JMUB1235_RS04745 PF07702 UTRA domain JMUB1235_RS04745 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS04755 PF02540 NAD synthase JMUB1235_RS04755 PF00958 GMP synthase C terminal domain JMUB1235_RS04755 PF00117 Glutamine amidotransferase class-I JMUB1235_RS04765 PF12848 ABC transporter JMUB1235_RS04765 PF00005 ABC transporter JMUB1235_RS04775 PF02581 Thiamine monophosphate synthase JMUB1235_RS04775 PF08543 Phosphomethylpyrimidine kinase JMUB1235_RS04780 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS04780 PF00155 Aminotransferase class I and II JMUB1235_RS04785 PF03477 ATP cone domain JMUB1235_RS04785 PF13597 Anaerobic ribonucleoside-triphosphate reductase JMUB1235_RS04790 PF13091 PLD-like domain JMUB1235_RS04795 PF01268 Formate--tetrahydrofolate ligase JMUB1235_RS04800 PF10437 Bacterial lipoate protein ligase C-terminus JMUB1235_RS04800 PF03099 Biotin/lipoate A/B protein ligase family JMUB1235_RS04810 PF01661 Macro domain JMUB1235_RS04815 PF01597 Glycine cleavage H-protein JMUB1235_RS04820 PF00296 Luciferase-like monooxygenase JMUB1235_RS04825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMUB1235_RS04830 PF03099 Biotin/lipoate A/B protein ligase family JMUB1235_RS04835 PF04127 DNA / pantothenate metabolism flavoprotein JMUB1235_RS04835 PF02441 Flavoprotein JMUB1235_RS04840 PF02441 Flavoprotein JMUB1235_RS04845 PF12822 ECF transporter, substrate-specific component JMUB1235_RS04850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMUB1235_RS04850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMUB1235_RS04850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMUB1235_RS04850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMUB1235_RS04855 PF02653 Branched-chain amino acid transport system / permease component JMUB1235_RS04860 PF02653 Branched-chain amino acid transport system / permease component JMUB1235_RS04865 PF00005 ABC transporter JMUB1235_RS04870 PF02608 ABC transporter substrate-binding protein PnrA-like JMUB1235_RS04875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMUB1235_RS04880 PF05175 Methyltransferase small domain JMUB1235_RS04885 PF00485 Phosphoribulokinase / Uridine kinase family JMUB1235_RS04890 PF01649 Ribosomal protein S20 JMUB1235_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS04895 PF00512 His Kinase A (phospho-acceptor) domain JMUB1235_RS04900 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS04900 PF00072 Response regulator receiver domain JMUB1235_RS04905 PF11838 ERAP1-like C-terminal domain JMUB1235_RS04905 PF01433 Peptidase family M1 domain JMUB1235_RS04915 PF01895 PhoU domain JMUB1235_RS04920 PF00005 ABC transporter JMUB1235_RS04925 PF00005 ABC transporter JMUB1235_RS04930 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS04935 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS04940 PF12849 PBP superfamily domain JMUB1235_RS04945 PF01189 16S rRNA methyltransferase RsmB/F JMUB1235_RS04945 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JMUB1235_RS04945 PF17126 RsmF rRNA methyltransferase first C-terminal domain JMUB1235_RS04950 PF00459 Inositol monophosphatase family JMUB1235_RS04955 PF05256 Uncharacterised protein family (UPF0223) JMUB1235_RS04960 PF03960 ArsC family JMUB1235_RS04965 PF01687 Riboflavin kinase JMUB1235_RS04965 PF06574 FAD synthetase JMUB1235_RS04970 PF01509 TruB family pseudouridylate synthase (N terminal domain) JMUB1235_RS04970 PF16198 tRNA pseudouridylate synthase B C-terminal domain JMUB1235_RS04995 PF00005 ABC transporter JMUB1235_RS04995 PF02687 FtsX-like permease family JMUB1235_RS04995 PF12704 MacB-like periplasmic core domain JMUB1235_RS05010 PF03780 Asp23 family, cell envelope-related function JMUB1235_RS05015 PF05532 CsbD-like JMUB1235_RS05020 PF03780 Asp23 family, cell envelope-related function JMUB1235_RS05040 PF00580 UvrD/REP helicase N-terminal domain JMUB1235_RS05040 PF13361 UvrD-like helicase C-terminal domain JMUB1235_RS05045 PF01235 Sodium:alanine symporter family JMUB1235_RS05050 PF01545 Cation efflux family JMUB1235_RS05050 PF16916 Dimerisation domain of Zinc Transporter JMUB1235_RS05055 PF07373 CAMP factor (Cfa) JMUB1235_RS05060 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMUB1235_RS05065 PF00005 ABC transporter JMUB1235_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05075 PF03831 PhnA domain JMUB1235_RS05075 PF08274 PhnA Zinc-Ribbon JMUB1235_RS05080 PF01380 SIS domain JMUB1235_RS05085 PF10502 Signal peptidase, peptidase S26 JMUB1235_RS05090 PF00224 Pyruvate kinase, barrel domain JMUB1235_RS05090 PF02887 Pyruvate kinase, alpha/beta domain JMUB1235_RS05095 PF00365 Phosphofructokinase JMUB1235_RS05100 PF01336 OB-fold nucleic acid binding domain JMUB1235_RS05100 PF02811 PHP domain JMUB1235_RS05100 PF14579 Helix-hairpin-helix motif JMUB1235_RS05100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMUB1235_RS05100 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMUB1235_RS05105 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS05110 PF00005 ABC transporter JMUB1235_RS05135 PF00343 Carbohydrate phosphorylase JMUB1235_RS05140 PF02446 4-alpha-glucanotransferase JMUB1235_RS05145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JMUB1235_RS05145 PF00356 Bacterial regulatory proteins, lacI family JMUB1235_RS05150 PF13416 Bacterial extracellular solute-binding protein JMUB1235_RS05155 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05160 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05165 PF00356 Bacterial regulatory proteins, lacI family JMUB1235_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05185 PF00128 Alpha amylase, catalytic domain JMUB1235_RS05185 PF00686 Starch binding domain JMUB1235_RS05185 PF01833 IPT/TIG domain JMUB1235_RS05190 PF00128 Alpha amylase, catalytic domain JMUB1235_RS05190 PF02903 Alpha amylase, N-terminal ig-like domain JMUB1235_RS05195 PF13416 Bacterial extracellular solute-binding protein JMUB1235_RS05205 PF00934 PE family JMUB1235_RS05205 PF07859 alpha/beta hydrolase fold JMUB1235_RS05210 PF04914 DltD protein JMUB1235_RS05215 PF00550 Phosphopantetheine attachment site JMUB1235_RS05220 PF03062 MBOAT, membrane-bound O-acyltransferase family JMUB1235_RS05225 PF13193 AMP-binding enzyme C-terminal domain JMUB1235_RS05225 PF00501 AMP-binding enzyme JMUB1235_RS05235 PF12344 Ultra-violet resistance protein B JMUB1235_RS05235 PF00271 Helicase conserved C-terminal domain JMUB1235_RS05235 PF04851 Type III restriction enzyme, res subunit JMUB1235_RS05235 PF17757 UvrB interaction domain JMUB1235_RS05235 PF02151 UvrB/uvrC motif JMUB1235_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05245 PF00005 ABC transporter JMUB1235_RS05250 PF02378 Phosphotransferase system, EIIC JMUB1235_RS05260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMUB1235_RS05265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMUB1235_RS05270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMUB1235_RS05270 PF00874 PRD domain JMUB1235_RS05270 PF05043 Mga helix-turn-helix domain JMUB1235_RS05270 PF08279 HTH domain JMUB1235_RS05280 PF00232 Glycosyl hydrolase family 1 JMUB1235_RS05295 PF09269 Domain of unknown function (DUF1967) JMUB1235_RS05295 PF01926 50S ribosome-binding GTPase JMUB1235_RS05295 PF01018 GTP1/OBG JMUB1235_RS05310 PF00849 RNA pseudouridylate synthase JMUB1235_RS05310 PF01479 S4 domain JMUB1235_RS05320 PF07690 Major Facilitator Superfamily JMUB1235_RS05325 PF08903 Domain of unknown function (DUF1846) JMUB1235_RS05340 PF05958 tRNA (Uracil-5-)-methyltransferase JMUB1235_RS05340 PF01938 TRAM domain JMUB1235_RS05345 PF03816 Cell envelope-related transcriptional attenuator domain JMUB1235_RS05350 PF01202 Shikimate kinase JMUB1235_RS05355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMUB1235_RS05365 PF00557 Metallopeptidase family M24 JMUB1235_RS05370 PF03061 Thioesterase superfamily JMUB1235_RS05370 PF00571 CBS domain JMUB1235_RS05370 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS05370 PF07085 DRTGG domain JMUB1235_RS05375 PF13302 Acetyltransferase (GNAT) domain JMUB1235_RS05380 PF01378 B domain JMUB1235_RS05380 PF00746 LPXTG cell wall anchor motif JMUB1235_RS05380 PF17573 GA-like domain JMUB1235_RS05380 PF01378 B domain JMUB1235_RS05380 PF00746 LPXTG cell wall anchor motif JMUB1235_RS05380 PF17573 GA-like domain JMUB1235_RS05385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMUB1235_RS05390 PF00438 S-adenosylmethionine synthetase, N-terminal domain JMUB1235_RS05390 PF02772 S-adenosylmethionine synthetase, central domain JMUB1235_RS05390 PF02773 S-adenosylmethionine synthetase, C-terminal domain JMUB1235_RS05400 PF08279 HTH domain JMUB1235_RS05400 PF03099 Biotin/lipoate A/B protein ligase family JMUB1235_RS05400 PF02237 Biotin protein ligase C terminal domain JMUB1235_RS05410 PF12169 DNA polymerase III subunits gamma and tau domain III JMUB1235_RS05415 PF13185 GAF domain JMUB1235_RS05430 PF00485 Phosphoribulokinase / Uridine kinase family JMUB1235_RS05435 PF00270 DEAD/DEAH box helicase JMUB1235_RS05435 PF00271 Helicase conserved C-terminal domain JMUB1235_RS05440 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain JMUB1235_RS05440 PF01522 Polysaccharide deacetylase JMUB1235_RS05445 PF00171 Aldehyde dehydrogenase family JMUB1235_RS05450 PF02896 PEP-utilising enzyme, TIM barrel domain JMUB1235_RS05450 PF05524 PEP-utilising enzyme, N-terminal JMUB1235_RS05450 PF00391 PEP-utilising enzyme, mobile domain JMUB1235_RS05455 PF00381 PTS HPr component phosphorylation site JMUB1235_RS05460 PF00462 Glutaredoxin JMUB1235_RS05465 PF00317 Ribonucleotide reductase, all-alpha domain JMUB1235_RS05465 PF08343 Ribonucleotide reductase N-terminal JMUB1235_RS05465 PF02867 Ribonucleotide reductase, barrel domain JMUB1235_RS05470 PF00268 Ribonucleotide reductase, small chain JMUB1235_RS05495 PF01381 Helix-turn-helix JMUB1235_RS05500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMUB1235_RS05500 PF01411 tRNA synthetases class II (A) JMUB1235_RS05500 PF02272 DHHA1 domain JMUB1235_RS05505 PF13145 PPIC-type PPIASE domain JMUB1235_RS05510 PF01596 O-methyltransferase JMUB1235_RS05515 PF07690 Major Facilitator Superfamily JMUB1235_RS05520 PF08439 Oligopeptidase F JMUB1235_RS05520 PF01432 Peptidase family M3 JMUB1235_RS05530 PF01479 S4 domain JMUB1235_RS05530 PF00849 RNA pseudouridylate synthase JMUB1235_RS05535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JMUB1235_RS05540 PF02547 Queuosine biosynthesis protein JMUB1235_RS05565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JMUB1235_RS05565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JMUB1235_RS05575 PF03772 Competence protein JMUB1235_RS05575 PF13567 Domain of unknown function (DUF4131) JMUB1235_RS05575 PF00753 Metallo-beta-lactamase superfamily JMUB1235_RS05580 PF10531 SLBB domain JMUB1235_RS05585 PF01553 Acyltransferase JMUB1235_RS05590 PF05175 Methyltransferase small domain JMUB1235_RS05595 PF01541 GIY-YIG catalytic domain JMUB1235_RS05600 PF02705 K+ potassium transporter JMUB1235_RS05605 PF00270 DEAD/DEAH box helicase JMUB1235_RS05605 PF00271 Helicase conserved C-terminal domain JMUB1235_RS05610 PF03144 Elongation factor Tu domain 2 JMUB1235_RS05610 PF00009 Elongation factor Tu GTP binding domain JMUB1235_RS05610 PF16658 Class II release factor RF3, C-terminal domain JMUB1235_RS05625 PF01225 Mur ligase family, catalytic domain JMUB1235_RS05625 PF08245 Mur ligase middle domain JMUB1235_RS05625 PF02875 Mur ligase family, glutamate ligase domain JMUB1235_RS05630 PF01820 D-ala D-ala ligase N-terminus JMUB1235_RS05630 PF07478 D-ala D-ala ligase C-terminus JMUB1235_RS05635 PF13662 Toprim domain JMUB1235_RS05635 PF02132 RecR protein JMUB1235_RS05640 PF03717 Penicillin-binding Protein dimerisation domain JMUB1235_RS05640 PF00905 Penicillin binding protein transpeptidase domain JMUB1235_RS05645 PF01226 Formate/nitrite transporter JMUB1235_RS05655 PF08279 HTH domain JMUB1235_RS05655 PF02829 3H domain JMUB1235_RS05660 PF00300 Histidine phosphatase superfamily (branch 1) JMUB1235_RS05665 PF01180 Dihydroorotate dehydrogenase JMUB1235_RS05675 PF00216 Bacterial DNA-binding protein JMUB1235_RS05685 PF13472 GDSL-like Lipase/Acylhydrolase family JMUB1235_RS05690 PF02645 Uncharacterised protein, DegV family COG1307 JMUB1235_RS05700 PF13476 AAA domain JMUB1235_RS05705 PF02863 Arginine repressor, C-terminal domain JMUB1235_RS05705 PF01316 Arginine repressor, DNA binding domain JMUB1235_RS05710 PF01728 FtsJ-like methyltransferase JMUB1235_RS05710 PF01479 S4 domain JMUB1235_RS05715 PF00348 Polyprenyl synthetase JMUB1235_RS05720 PF02609 Exonuclease VII small subunit JMUB1235_RS05725 PF02601 Exonuclease VII, large subunit JMUB1235_RS05725 PF13742 OB-fold nucleic acid binding domain JMUB1235_RS05730 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JMUB1235_RS05730 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JMUB1235_RS05735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMUB1235_RS05735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMUB1235_RS05735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMUB1235_RS05735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMUB1235_RS05740 PF00875 DNA photolyase JMUB1235_RS05740 PF03441 FAD binding domain of DNA photolyase JMUB1235_RS05745 PF00005 ABC transporter JMUB1235_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS05755 PF08796 Protein of unknown function (DUF1797) JMUB1235_RS05760 PF10431 C-terminal, D2-small domain, of ClpB protein JMUB1235_RS05760 PF17871 AAA lid domain JMUB1235_RS05760 PF07724 AAA domain (Cdc48 subfamily) JMUB1235_RS05760 PF00004 ATPase family associated with various cellular activities (AAA) JMUB1235_RS05765 PF00293 NUDIX domain JMUB1235_RS05775 PF00133 tRNA synthetases class I (I, L, M and V) JMUB1235_RS05775 PF08264 Anticodon-binding domain of tRNA JMUB1235_RS05780 PF05103 DivIVA protein JMUB1235_RS05785 PF01479 S4 domain JMUB1235_RS05785 PF17774 Putative RNA-binding domain in YlmH JMUB1235_RS05795 PF04472 Cell division protein SepF JMUB1235_RS05805 PF00091 Tubulin/FtsZ family, GTPase domain JMUB1235_RS05805 PF12327 FtsZ family, C-terminal domain JMUB1235_RS05810 PF11983 Membrane-attachment and polymerisation-promoting switch JMUB1235_RS05810 PF02491 SHS2 domain inserted in FTSA JMUB1235_RS05815 PF08478 POTRA domain, FtsQ-type JMUB1235_RS05820 PF04101 Glycosyltransferase family 28 C-terminal domain JMUB1235_RS05820 PF03033 Glycosyltransferase family 28 N-terminal domain JMUB1235_RS05825 PF08245 Mur ligase middle domain JMUB1235_RS05825 PF02875 Mur ligase family, glutamate ligase domain JMUB1235_RS05835 PF14492 Elongation Factor G, domain II JMUB1235_RS05835 PF00679 Elongation factor G C-terminus JMUB1235_RS05835 PF00009 Elongation factor Tu GTP binding domain JMUB1235_RS05835 PF03144 Elongation factor Tu domain 2 JMUB1235_RS05840 PF00581 Rhodanese-like domain JMUB1235_RS05845 PF00480 ROK family JMUB1235_RS05855 PF00210 Ferritin-like domain JMUB1235_RS05865 PF04055 Radical SAM superfamily JMUB1235_RS05870 PF06265 Protein of unknown function (DUF1027) JMUB1235_RS05875 PF00356 Bacterial regulatory proteins, lacI family JMUB1235_RS05880 PF05362 Lon protease (S16) C-terminal proteolytic domain JMUB1235_RS05880 PF13180 PDZ domain JMUB1235_RS05885 PF01467 Cytidylyltransferase-like JMUB1235_RS05895 PF03590 Aspartate-ammonia ligase JMUB1235_RS05900 PF00696 Amino acid kinase family JMUB1235_RS05905 PF01546 Peptidase family M20/M25/M40 JMUB1235_RS05910 PF03606 C4-dicarboxylate anaerobic carrier JMUB1235_RS05915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JMUB1235_RS05915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JMUB1235_RS05920 PF13673 Acetyltransferase (GNAT) domain JMUB1235_RS05935 PF02863 Arginine repressor, C-terminal domain JMUB1235_RS05935 PF01316 Arginine repressor, DNA binding domain JMUB1235_RS05950 PF06580 Histidine kinase JMUB1235_RS05950 PF00672 HAMP domain JMUB1235_RS05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS05950 PF02743 Cache domain JMUB1235_RS05955 PF12833 Helix-turn-helix domain JMUB1235_RS05955 PF00072 Response regulator receiver domain JMUB1235_RS05960 PF01641 SelR domain JMUB1235_RS05960 PF01625 Peptide methionine sulfoxide reductase JMUB1235_RS05965 PF08534 Redoxin JMUB1235_RS05970 PF02683 Cytochrome C biogenesis protein transmembrane region JMUB1235_RS05975 PF09827 CRISPR associated protein Cas2 JMUB1235_RS05980 PF01867 CRISPR associated protein Cas1 JMUB1235_RS06010 PF10458 Valyl tRNA synthetase tRNA binding arm JMUB1235_RS06010 PF00133 tRNA synthetases class I (I, L, M and V) JMUB1235_RS06010 PF08264 Anticodon-binding domain of tRNA JMUB1235_RS06045 PF01609 Transposase DDE domain JMUB1235_RS06045 PF13808 DDE_Tnp_1-associated JMUB1235_RS06055 PF01817 Chorismate mutase type II JMUB1235_RS06055 PF00793 DAHP synthetase I family JMUB1235_RS06060 PF01761 3-dehydroquinate synthase JMUB1235_RS06075 PF13649 Methyltransferase domain JMUB1235_RS06080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JMUB1235_RS06080 PF08501 Shikimate dehydrogenase substrate binding domain JMUB1235_RS06085 PF16355 Domain of unknown function (DUF4982) JMUB1235_RS06085 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JMUB1235_RS06085 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JMUB1235_RS06085 PF02837 Glycosyl hydrolases family 2, sugar binding domain JMUB1235_RS06085 PF00703 Glycosyl hydrolases family 2 JMUB1235_RS06090 PF00072 Response regulator receiver domain JMUB1235_RS06090 PF12833 Helix-turn-helix domain JMUB1235_RS06095 PF02743 Cache domain JMUB1235_RS06095 PF00672 HAMP domain JMUB1235_RS06095 PF06580 Histidine kinase JMUB1235_RS06095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS06105 PF12010 Domain of unknown function (DUF3502) JMUB1235_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS06115 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS06120 PF00480 ROK family JMUB1235_RS06125 PF00232 Glycosyl hydrolase family 1 JMUB1235_RS06130 PF07555 beta-N-acetylglucosaminidase JMUB1235_RS06130 PF02838 Glycosyl hydrolase family 20, domain 2 JMUB1235_RS06135 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS06145 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain JMUB1235_RS06145 PF09261 Alpha mannosidase middle domain JMUB1235_RS06145 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 JMUB1235_RS06145 PF07748 Glycosyl hydrolases family 38 C-terminal domain JMUB1235_RS06145 PF01074 Glycosyl hydrolases family 38 N-terminal domain JMUB1235_RS06155 PF01938 TRAM domain JMUB1235_RS06155 PF05958 tRNA (Uracil-5-)-methyltransferase JMUB1235_RS06160 PF02631 RecX family JMUB1235_RS06165 PF04167 Protein of unknown function (DUF402) JMUB1235_RS06240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JMUB1235_RS06240 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JMUB1235_RS06250 PF00271 Helicase conserved C-terminal domain JMUB1235_RS06250 PF04851 Type III restriction enzyme, res subunit JMUB1235_RS06255 PF01205 Uncharacterized protein family UPF0029 JMUB1235_RS06255 PF09186 Domain of unknown function (DUF1949) JMUB1235_RS06260 PF00291 Pyridoxal-phosphate dependent enzyme JMUB1235_RS06265 PF00575 S1 RNA binding domain JMUB1235_RS06270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JMUB1235_RS06275 PF00196 Bacterial regulatory proteins, luxR family JMUB1235_RS06275 PF00072 Response regulator receiver domain JMUB1235_RS06280 PF07730 Histidine kinase JMUB1235_RS06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS06280 PF00672 HAMP domain JMUB1235_RS06290 PF03793 PASTA domain JMUB1235_RS06290 PF00069 Protein kinase domain JMUB1235_RS06300 PF01189 16S rRNA methyltransferase RsmB/F JMUB1235_RS06300 PF01029 NusB family JMUB1235_RS06305 PF02911 Formyl transferase, C-terminal domain JMUB1235_RS06305 PF00551 Formyl transferase JMUB1235_RS06310 PF00271 Helicase conserved C-terminal domain JMUB1235_RS06310 PF17764 3′ DNA-binding domain (3′BD) JMUB1235_RS06310 PF18074 Primosomal protein N C-terminal domain JMUB1235_RS06310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JMUB1235_RS06310 PF04851 Type III restriction enzyme, res subunit JMUB1235_RS06315 PF01192 RNA polymerase Rpb6 JMUB1235_RS06320 PF00625 Guanylate kinase JMUB1235_RS06325 PF12072 Domain of unknown function (DUF3552) JMUB1235_RS06325 PF01966 HD domain JMUB1235_RS06325 PF00013 KH domain JMUB1235_RS06330 PF03466 LysR substrate binding domain JMUB1235_RS06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMUB1235_RS06335 PF00108 Thiolase, N-terminal domain JMUB1235_RS06335 PF02803 Thiolase, C-terminal domain JMUB1235_RS06345 PF01144 Coenzyme A transferase JMUB1235_RS06360 PF02664 S-Ribosylhomocysteinase (LuxS) JMUB1235_RS06365 PF18708 MapZ extracellular C-terminal domain 2 JMUB1235_RS06365 PF18041 MapZ extracellular domain 1 JMUB1235_RS06370 PF02926 THUMP domain JMUB1235_RS06370 PF01170 Putative RNA methylase family UPF0020 JMUB1235_RS06380 PF05103 DivIVA protein JMUB1235_RS06385 PF06908 YspA SLOG family JMUB1235_RS06390 PF03838 Recombination protein U JMUB1235_RS06395 PF00912 Transglycosylase JMUB1235_RS06395 PF00905 Penicillin binding protein transpeptidase domain JMUB1235_RS06400 PF03051 Peptidase C1-like family JMUB1235_RS06405 PF02540 NAD synthase JMUB1235_RS06410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JMUB1235_RS06410 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JMUB1235_RS06410 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JMUB1235_RS06415 PF00324 Amino acid permease JMUB1235_RS06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS06430 PF00005 ABC transporter JMUB1235_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS06440 PF00271 Helicase conserved C-terminal domain JMUB1235_RS06440 PF00270 DEAD/DEAH box helicase JMUB1235_RS06445 PF00953 Glycosyl transferase family 4 JMUB1235_RS06445 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JMUB1235_RS06450 PF03717 Penicillin-binding Protein dimerisation domain JMUB1235_RS06450 PF00905 Penicillin binding protein transpeptidase domain JMUB1235_RS06450 PF03793 PASTA domain JMUB1235_RS06460 PF01795 MraW methylase family JMUB1235_RS06470 PF00171 Aldehyde dehydrogenase family JMUB1235_RS06475 PF00696 Amino acid kinase family JMUB1235_RS06485 PF00005 ABC transporter JMUB1235_RS06495 PF02779 Transketolase, pyrimidine binding domain JMUB1235_RS06495 PF02780 Transketolase, C-terminal domain JMUB1235_RS06495 PF00456 Transketolase, thiamine diphosphate binding domain JMUB1235_RS06500 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMUB1235_RS06510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMUB1235_RS06510 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS06515 PF00230 Major intrinsic protein JMUB1235_RS06520 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JMUB1235_RS06520 PF01266 FAD dependent oxidoreductase JMUB1235_RS06525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMUB1235_RS06525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMUB1235_RS06530 PF03413 Peptidase propeptide and YPEB domain JMUB1235_RS06535 PF05979 Bacterial protein of unknown function (DUF896) JMUB1235_RS06540 PF02092 Glycyl-tRNA synthetase beta subunit JMUB1235_RS06545 PF02091 Glycyl-tRNA synthetase alpha subunit JMUB1235_RS06555 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JMUB1235_RS06560 PF00248 Aldo/keto reductase family JMUB1235_RS06565 PF01979 Amidohydrolase family JMUB1235_RS06570 PF02690 Na+/Pi-cotransporter JMUB1235_RS06580 PF02645 Uncharacterised protein, DegV family COG1307 JMUB1235_RS06595 PF03458 UPF0126 domain JMUB1235_RS06600 PF01791 DeoC/LacD family aldolase JMUB1235_RS06610 PF02502 Ribose/Galactose Isomerase JMUB1235_RS06615 PF02502 Ribose/Galactose Isomerase JMUB1235_RS06635 PF00455 DeoR C terminal sensor domain JMUB1235_RS06635 PF08220 DeoR-like helix-turn-helix domain JMUB1235_RS06650 PF00403 Heavy-metal-associated domain JMUB1235_RS06655 PF03965 Penicillinase repressor JMUB1235_RS06660 PF07859 alpha/beta hydrolase fold JMUB1235_RS06665 PF02033 Ribosome-binding factor A JMUB1235_RS06670 PF11987 Translation-initiation factor 2 JMUB1235_RS06670 PF04760 Translation initiation factor IF-2, N-terminal region JMUB1235_RS06670 PF00009 Elongation factor Tu GTP binding domain JMUB1235_RS06675 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JMUB1235_RS06680 PF04296 Protein of unknown function (DUF448) JMUB1235_RS06685 PF13184 NusA-like KH domain JMUB1235_RS06685 PF08529 NusA N-terminal domain JMUB1235_RS06685 PF00575 S1 RNA binding domain JMUB1235_RS06690 PF02576 RimP N-terminal domain JMUB1235_RS06690 PF17384 RimP C-terminal SH3 domain JMUB1235_RS06700 PF02390 Putative methyltransferase JMUB1235_RS06710 PF05975 Bacterial ABC transporter protein EcsB JMUB1235_RS06715 PF00005 ABC transporter JMUB1235_RS06720 PF01230 HIT domain JMUB1235_RS06730 PF03816 Cell envelope-related transcriptional attenuator domain JMUB1235_RS06740 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JMUB1235_RS06745 PF00860 Permease family JMUB1235_RS06755 PF03830 PTS system sorbose subfamily IIB component JMUB1235_RS06755 PF03610 PTS system fructose IIA component JMUB1235_RS06760 PF03609 PTS system sorbose-specific iic component JMUB1235_RS06765 PF03613 PTS system mannose/fructose/sorbose family IID component JMUB1235_RS06775 PF02403 Seryl-tRNA synthetase N-terminal domain JMUB1235_RS06775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMUB1235_RS06780 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JMUB1235_RS06785 PF01039 Carboxyl transferase domain JMUB1235_RS06785 PF17848 Acetyl-coA carboxylase zinc finger domain JMUB1235_RS06790 PF02785 Biotin carboxylase C-terminal domain JMUB1235_RS06790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMUB1235_RS06790 PF00289 Biotin carboxylase, N-terminal domain JMUB1235_RS06795 PF07977 FabA-like domain JMUB1235_RS06800 PF00364 Biotin-requiring enzyme JMUB1235_RS06805 PF00109 Beta-ketoacyl synthase, N-terminal domain JMUB1235_RS06805 PF02801 Beta-ketoacyl synthase, C-terminal domain JMUB1235_RS06815 PF00698 Acyl transferase domain JMUB1235_RS06820 PF03060 Nitronate monooxygenase JMUB1235_RS06825 PF00550 Phosphopantetheine attachment site JMUB1235_RS06830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JMUB1235_RS06830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JMUB1235_RS06840 PF00378 Enoyl-CoA hydratase/isomerase JMUB1235_RS06845 PF00226 DnaJ domain JMUB1235_RS06845 PF00684 DnaJ central domain JMUB1235_RS06845 PF01556 DnaJ C terminal domain JMUB1235_RS06850 PF00012 Hsp70 protein JMUB1235_RS06855 PF01025 GrpE JMUB1235_RS06860 PF01628 HrcA protein C terminal domain JMUB1235_RS06860 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JMUB1235_RS06875 PF00300 Histidine phosphatase superfamily (branch 1) JMUB1235_RS06880 PF04226 Transglycosylase associated protein JMUB1235_RS06890 PF02637 GatB domain JMUB1235_RS06890 PF02934 GatB/GatE catalytic domain JMUB1235_RS06895 PF01425 Amidase JMUB1235_RS06900 PF02686 Glu-tRNAGln amidotransferase C subunit JMUB1235_RS06915 PF00857 Isochorismatase family JMUB1235_RS06920 PF08222 CodY helix-turn-helix domain JMUB1235_RS06920 PF06018 CodY GAF-like domain JMUB1235_RS06925 PF00155 Aminotransferase class I and II JMUB1235_RS06940 PF17763 Glutaminase/Asparaginase C-terminal domain JMUB1235_RS06940 PF00710 Asparaginase, N-terminal JMUB1235_RS06950 PF00005 ABC transporter JMUB1235_RS06955 PF00270 DEAD/DEAH box helicase JMUB1235_RS06955 PF17191 RecG wedge domain JMUB1235_RS06955 PF00271 Helicase conserved C-terminal domain JMUB1235_RS06965 PF00005 ABC transporter JMUB1235_RS06980 PF00005 ABC transporter JMUB1235_RS06980 PF00664 ABC transporter transmembrane region JMUB1235_RS06985 PF00005 ABC transporter JMUB1235_RS06985 PF00664 ABC transporter transmembrane region JMUB1235_RS06990 PF00005 ABC transporter JMUB1235_RS06995 PF01032 FecCD transport family JMUB1235_RS07000 PF01497 Periplasmic binding protein JMUB1235_RS07015 PF01476 LysM domain JMUB1235_RS07015 PF05257 CHAP domain JMUB1235_RS07020 PF01168 Alanine racemase, N-terminal domain JMUB1235_RS07020 PF00842 Alanine racemase, C-terminal domain JMUB1235_RS07025 PF01648 4'-phosphopantetheinyl transferase superfamily JMUB1235_RS07030 PF07517 SecA DEAD-like domain JMUB1235_RS07030 PF07516 SecA Wing and Scaffold domain JMUB1235_RS07030 PF01043 SecA preprotein cross-linking domain JMUB1235_RS07030 PF02810 SEC-C motif JMUB1235_RS07040 PF13808 DDE_Tnp_1-associated JMUB1235_RS07040 PF01609 Transposase DDE domain JMUB1235_RS07045 PF01238 Phosphomannose isomerase type I JMUB1235_RS07050 PF00480 ROK family JMUB1235_RS07060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMUB1235_RS07060 PF00367 phosphotransferase system, EIIB JMUB1235_RS07060 PF02378 Phosphotransferase system, EIIC JMUB1235_RS07065 PF08244 Glycosyl hydrolases family 32 C terminal JMUB1235_RS07065 PF00251 Glycosyl hydrolases family 32 N-terminal domain JMUB1235_RS07070 PF00356 Bacterial regulatory proteins, lacI family JMUB1235_RS07075 PF01029 NusB family JMUB1235_RS07080 PF03780 Asp23 family, cell envelope-related function JMUB1235_RS07085 PF01132 Elongation factor P (EF-P) OB domain JMUB1235_RS07085 PF09285 Elongation factor P, C-terminal JMUB1235_RS07085 PF08207 Elongation factor P (EF-P) KOW-like domain JMUB1235_RS07090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMUB1235_RS07095 PF01321 Creatinase/Prolidase N-terminal domain JMUB1235_RS07095 PF00557 Metallopeptidase family M24 JMUB1235_RS07100 PF17760 UvrA interaction domain JMUB1235_RS07100 PF17755 UvrA DNA-binding domain JMUB1235_RS07100 PF00005 ABC transporter JMUB1235_RS07115 PF01084 Ribosomal protein S18 JMUB1235_RS07120 PF00436 Single-strand binding protein family JMUB1235_RS07125 PF01250 Ribosomal protein S6 JMUB1235_RS07135 PF00730 HhH-GPD superfamily base excision DNA repair protein JMUB1235_RS07135 PF14815 NUDIX domain JMUB1235_RS07140 PF01381 Helix-turn-helix JMUB1235_RS07145 PF00085 Thioredoxin JMUB1235_RS07155 PF01713 Smr domain JMUB1235_RS07155 PF00488 MutS domain V JMUB1235_RS07170 PF11858 Domain of unknown function (DUF3378) JMUB1235_RS07170 PF01351 Ribonuclease HII JMUB1235_RS07175 PF10502 Signal peptidase, peptidase S26 JMUB1235_RS07180 PF13538 UvrD-like helicase C-terminal domain JMUB1235_RS07180 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JMUB1235_RS07180 PF14490 Helix-hairpin-helix containing domain JMUB1235_RS07190 PF11798 IMS family HHH motif JMUB1235_RS07190 PF00817 impB/mucB/samB family JMUB1235_RS07190 PF11799 impB/mucB/samB family C-terminal domain JMUB1235_RS07195 PF01228 Glycine radical JMUB1235_RS07195 PF02901 Pyruvate formate lyase-like JMUB1235_RS07200 PF00144 Beta-lactamase JMUB1235_RS07215 PF00230 Major intrinsic protein JMUB1235_RS07230 PF07690 Major Facilitator Superfamily JMUB1235_RS07235 PF13545 Crp-like helix-turn-helix domain JMUB1235_RS07240 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JMUB1235_RS07240 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JMUB1235_RS07240 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal JMUB1235_RS07255 PF02575 YbaB/EbfC DNA-binding family JMUB1235_RS07260 PF07739 TipAS antibiotic-recognition domain JMUB1235_RS07260 PF13411 MerR HTH family regulatory protein JMUB1235_RS07265 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMUB1235_RS07265 PF02811 PHP domain JMUB1235_RS07265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMUB1235_RS07265 PF14579 Helix-hairpin-helix motif JMUB1235_RS07265 PF11490 DNA polymerase III polC-type N-terminus II JMUB1235_RS07265 PF00929 Exonuclease JMUB1235_RS07265 PF01336 OB-fold nucleic acid binding domain JMUB1235_RS07270 PF08279 HTH domain JMUB1235_RS07270 PF04394 Protein of unknown function, DUF536 JMUB1235_RS07280 PF01791 DeoC/LacD family aldolase JMUB1235_RS07285 PF07670 Nucleoside recognition JMUB1235_RS07285 PF01773 Na+ dependent nucleoside transporter N-terminus JMUB1235_RS07285 PF07662 Na+ dependent nucleoside transporter C-terminus JMUB1235_RS07290 PF01048 Phosphorylase superfamily JMUB1235_RS07300 PF00253 Ribosomal protein S14p/S29e JMUB1235_RS07305 PF00814 Glycoprotease family JMUB1235_RS07310 PF00583 Acetyltransferase (GNAT) family JMUB1235_RS07315 PF00814 Glycoprotease family JMUB1235_RS07320 PF07288 Protein of unknown function (DUF1447) JMUB1235_RS07325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JMUB1235_RS07325 PF17770 Ribonuclease J C-terminal domain JMUB1235_RS07325 PF00753 Metallo-beta-lactamase superfamily JMUB1235_RS07330 PF03951 Glutamine synthetase, beta-Grasp domain JMUB1235_RS07330 PF00120 Glutamine synthetase, catalytic domain JMUB1235_RS07335 PF13411 MerR HTH family regulatory protein JMUB1235_RS07345 PF00162 Phosphoglycerate kinase JMUB1235_RS07350 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JMUB1235_RS07360 PF13684 Dihydroxyacetone kinase family JMUB1235_RS07360 PF02734 DAK2 domain JMUB1235_RS07365 PF03780 Asp23 family, cell envelope-related function JMUB1235_RS07370 PF00830 Ribosomal L28 family JMUB1235_RS07375 PF01116 Fructose-bisphosphate aldolase class-II JMUB1235_RS07390 PF06418 CTP synthase N-terminus JMUB1235_RS07390 PF00117 Glutamine amidotransferase class-I JMUB1235_RS07395 PF05066 HB1, ASXL, restriction endonuclease HTH domain JMUB1235_RS07400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JMUB1235_RS07400 PF05698 Bacterial trigger factor protein (TF) C-terminus JMUB1235_RS07400 PF05697 Bacterial trigger factor protein (TF) JMUB1235_RS07405 PF00924 Mechanosensitive ion channel JMUB1235_RS07410 PF04260 Protein of unknown function (DUF436) JMUB1235_RS07415 PF07155 ECF-type riboflavin transporter, S component JMUB1235_RS07420 PF08543 Phosphomethylpyrimidine kinase JMUB1235_RS07425 PF01416 tRNA pseudouridine synthase JMUB1235_RS07470 PF13808 DDE_Tnp_1-associated JMUB1235_RS07470 PF01609 Transposase DDE domain JMUB1235_RS07475 PF02595 Glycerate kinase family JMUB1235_RS07480 PF12008 Type I restriction and modification enzyme - subunit R C terminal JMUB1235_RS07480 PF18766 SWI2/SNF2 ATPase JMUB1235_RS07480 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JMUB1235_RS07490 PF12161 HsdM N-terminal domain JMUB1235_RS07490 PF02384 N-6 DNA Methylase JMUB1235_RS07500 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS07500 PF00072 Response regulator receiver domain JMUB1235_RS07510 PF02687 FtsX-like permease family JMUB1235_RS07515 PF00005 ABC transporter JMUB1235_RS07525 PF04604 Type-A lantibiotic JMUB1235_RS07530 PF00232 Glycosyl hydrolase family 1 JMUB1235_RS07535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMUB1235_RS07535 PF02378 Phosphotransferase system, EIIC JMUB1235_RS07540 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMUB1235_RS07545 PF01791 DeoC/LacD family aldolase JMUB1235_RS07550 PF00294 pfkB family carbohydrate kinase JMUB1235_RS07555 PF02502 Ribose/Galactose Isomerase JMUB1235_RS07560 PF02502 Ribose/Galactose Isomerase JMUB1235_RS07565 PF08220 DeoR-like helix-turn-helix domain JMUB1235_RS07565 PF00455 DeoR C terminal sensor domain JMUB1235_RS07585 PF00380 Ribosomal protein S9/S16 JMUB1235_RS07590 PF00572 Ribosomal protein L13 JMUB1235_RS07595 PF01381 Helix-turn-helix JMUB1235_RS07605 PF02645 Uncharacterised protein, DegV family COG1307 JMUB1235_RS07615 PF08032 RNA 2'-O ribose methyltransferase substrate binding JMUB1235_RS07615 PF00588 SpoU rRNA Methylase family JMUB1235_RS07625 PF00636 Ribonuclease III domain JMUB1235_RS07630 PF01406 tRNA synthetases class I (C) catalytic domain JMUB1235_RS07630 PF09190 DALR domain JMUB1235_RS07645 PF00132 Bacterial transferase hexapeptide (six repeats) JMUB1235_RS07645 PF06426 Serine acetyltransferase, N-terminal JMUB1235_RS07655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JMUB1235_RS07655 PF01138 3' exoribonuclease family, domain 1 JMUB1235_RS07655 PF03725 3' exoribonuclease family, domain 2 JMUB1235_RS07655 PF00575 S1 RNA binding domain JMUB1235_RS07655 PF00013 KH domain JMUB1235_RS07660 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMUB1235_RS07665 PF03611 PTS system sugar-specific permease component JMUB1235_RS07670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMUB1235_RS07680 PF00312 Ribosomal protein S15 JMUB1235_RS07695 PF01327 Polypeptide deformylase JMUB1235_RS07700 PF03358 NADPH-dependent FMN reductase JMUB1235_RS07705 PF01047 MarR family JMUB1235_RS07710 PF11490 DNA polymerase III polC-type N-terminus II JMUB1235_RS07710 PF14480 DNA polymerase III polC-type N-terminus I JMUB1235_RS07710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMUB1235_RS07710 PF02811 PHP domain JMUB1235_RS07710 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMUB1235_RS07710 PF00929 Exonuclease JMUB1235_RS07715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMUB1235_RS07715 PF03129 Anticodon binding domain JMUB1235_RS07715 PF04073 Aminoacyl-tRNA editing domain JMUB1235_RS07720 PF02163 Peptidase family M50 JMUB1235_RS07720 PF13180 PDZ domain JMUB1235_RS07730 PF01255 Putative undecaprenyl diphosphate synthase JMUB1235_RS07735 PF02699 Preprotein translocase subunit JMUB1235_RS07745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JMUB1235_RS07745 PF17999 Pullulanase N1-terminal domain JMUB1235_RS07745 PF00128 Alpha amylase, catalytic domain JMUB1235_RS07755 PF00128 Alpha amylase, catalytic domain JMUB1235_RS07760 PF03459 TOBE domain JMUB1235_RS07760 PF17912 MalK OB fold domain JMUB1235_RS07760 PF00005 ABC transporter JMUB1235_RS07765 PF13556 PucR C-terminal helix-turn-helix domain JMUB1235_RS07770 PF02821 Staphylokinase/Streptokinase family JMUB1235_RS07775 PF02580 D-Tyr-tRNA(Tyr) deacylase JMUB1235_RS07780 PF02824 TGS domain JMUB1235_RS07780 PF04607 Region found in RelA / SpoT proteins JMUB1235_RS07780 PF13291 ACT domain JMUB1235_RS07785 PF04650 YSIRK type signal peptide JMUB1235_RS07785 PF00746 LPXTG cell wall anchor motif JMUB1235_RS07790 PF07972 NrdI Flavodoxin like JMUB1235_RS07795 PF03372 Endonuclease/Exonuclease/phosphatase family JMUB1235_RS07800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMUB1235_RS07800 PF00367 phosphotransferase system, EIIB JMUB1235_RS07800 PF02378 Phosphotransferase system, EIIC JMUB1235_RS07805 PF04452 RNA methyltransferase JMUB1235_RS07820 PF04715 Anthranilate synthase component I, N terminal region JMUB1235_RS07820 PF00425 chorismate binding enzyme JMUB1235_RS07825 PF00117 Glutamine amidotransferase class-I JMUB1235_RS07830 PF05496 Holliday junction DNA helicase RuvB P-loop domain JMUB1235_RS07830 PF12002 MgsA AAA+ ATPase C terminal JMUB1235_RS07830 PF16193 AAA C-terminal domain JMUB1235_RS07855 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JMUB1235_RS07855 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JMUB1235_RS07865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMUB1235_RS07870 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component JMUB1235_RS07880 PF00005 ABC transporter JMUB1235_RS07880 PF12558 ATP-binding cassette cobalt transporter JMUB1235_RS07885 PF00005 ABC transporter JMUB1235_RS07890 PF05532 CsbD-like JMUB1235_RS07900 PF01297 Zinc-uptake complex component A periplasmic JMUB1235_RS07910 PF06280 Fn3-like domain JMUB1235_RS07910 PF02225 PA domain JMUB1235_RS07910 PF00082 Subtilase family JMUB1235_RS07915 PF04650 YSIRK type signal peptide JMUB1235_RS07915 PF00746 LPXTG cell wall anchor motif JMUB1235_RS07915 PF02370 M protein repeat JMUB1235_RS07920 PF04650 YSIRK type signal peptide JMUB1235_RS07920 PF02370 M protein repeat JMUB1235_RS07920 PF00746 LPXTG cell wall anchor motif JMUB1235_RS07925 PF04650 YSIRK type signal peptide JMUB1235_RS07925 PF00746 LPXTG cell wall anchor motif JMUB1235_RS07930 PF08270 M protein trans-acting positive regulator (MGA) PRD domain JMUB1235_RS07930 PF05043 Mga helix-turn-helix domain JMUB1235_RS07930 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JMUB1235_RS07945 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMUB1235_RS07945 PF05257 CHAP domain JMUB1235_RS07950 PF00512 His Kinase A (phospho-acceptor) domain JMUB1235_RS07950 PF02702 Osmosensitive K+ channel His kinase sensor domain JMUB1235_RS07950 PF13493 Domain of unknown function (DUF4118) JMUB1235_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMUB1235_RS07955 PF00072 Response regulator receiver domain JMUB1235_RS07955 PF00486 Transcriptional regulatory protein, C terminal JMUB1235_RS07960 PF02687 FtsX-like permease family JMUB1235_RS07960 PF12704 MacB-like periplasmic core domain JMUB1235_RS07965 PF00005 ABC transporter JMUB1235_RS08000 PF13145 PPIC-type PPIASE domain JMUB1235_RS08015 PF13734 Spi protease inhibitor JMUB1235_RS08015 PF01640 Peptidase C10 family JMUB1235_RS08040 PF04608 Phosphatidylglycerophosphatase A JMUB1235_RS08045 PF00465 Iron-containing alcohol dehydrogenase JMUB1235_RS08050 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMUB1235_RS08055 PF01228 Glycine radical JMUB1235_RS08055 PF02901 Pyruvate formate lyase-like JMUB1235_RS08060 PF02378 Phosphotransferase system, EIIC JMUB1235_RS08065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMUB1235_RS08070 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMUB1235_RS08075 PF04198 Putative sugar-binding domain JMUB1235_RS08080 PF00455 DeoR C terminal sensor domain JMUB1235_RS08080 PF08220 DeoR-like helix-turn-helix domain JMUB1235_RS08085 PF04055 Radical SAM superfamily JMUB1235_RS08100 PF00471 Ribosomal protein L33 JMUB1235_RS08105 PF00912 Transglycosylase JMUB1235_RS08105 PF00905 Penicillin binding protein transpeptidase domain JMUB1235_RS08120 PF00849 RNA pseudouridylate synthase JMUB1235_RS08120 PF01479 S4 domain JMUB1235_RS08130 PF03577 Peptidase family C69 JMUB1235_RS08145 PF00118 TCP-1/cpn60 chaperonin family JMUB1235_RS08150 PF00166 Chaperonin 10 Kd subunit JMUB1235_RS08155 PF17871 AAA lid domain JMUB1235_RS08155 PF07724 AAA domain (Cdc48 subfamily) JMUB1235_RS08155 PF00004 ATPase family associated with various cellular activities (AAA) JMUB1235_RS08155 PF10431 C-terminal, D2-small domain, of ClpB protein JMUB1235_RS08155 PF02861 Clp amino terminal domain, pathogenicity island component JMUB1235_RS08160 PF17727 CtsR C-terminal dimerization domain JMUB1235_RS08160 PF05848 CtsR N-terminal HTH domain JMUB1235_RS08165 PF00313 'Cold-shock' DNA-binding domain JMUB1235_RS08175 PF00578 AhpC/TSA family JMUB1235_RS08180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMUB1235_RS08180 PF13192 Thioredoxin domain JMUB1235_RS08185 PF01979 Amidohydrolase family JMUB1235_RS08190 PF17391 Urocanase N-terminal domain JMUB1235_RS08190 PF17392 Urocanase C-terminal domain JMUB1235_RS08190 PF01175 Urocanase Rossmann-like domain JMUB1235_RS08195 PF07837 Formiminotransferase domain, N-terminal subdomain JMUB1235_RS08195 PF02971 Formiminotransferase domain JMUB1235_RS08200 PF04961 Formiminotransferase-cyclodeaminase JMUB1235_RS08205 PF01268 Formate--tetrahydrofolate ligase JMUB1235_RS08215 PF13520 Amino acid permease JMUB1235_RS08220 PF00221 Aromatic amino acid lyase JMUB1235_RS08225 PF00491 Arginase family JMUB1235_RS08235 PF00318 Ribosomal protein S2 JMUB1235_RS08240 PF00889 Elongation factor TS JMUB1235_RS08245 PF01431 Peptidase family M13 JMUB1235_RS08245 PF05649 Peptidase family M13 JMUB1235_RS08250 PF00128 Alpha amylase, catalytic domain JMUB1235_RS08250 PF16657 Maltogenic Amylase, C-terminal domain JMUB1235_RS08255 PF00367 phosphotransferase system, EIIB JMUB1235_RS08255 PF02378 Phosphotransferase system, EIIC JMUB1235_RS08260 PF07702 UTRA domain JMUB1235_RS08260 PF00392 Bacterial regulatory proteins, gntR family JMUB1235_RS08270 PF01638 HxlR-like helix-turn-helix JMUB1235_RS08275 PF01609 Transposase DDE domain JMUB1235_RS08275 PF13808 DDE_Tnp_1-associated JMUB1235_RS08280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMUB1235_RS08285 PF03883 Peroxide stress protein YaaA JMUB1235_RS08300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMUB1235_RS08310 PF13597 Anaerobic ribonucleoside-triphosphate reductase JMUB1235_RS08310 PF03477 ATP cone domain JMUB1235_RS08320 PF06949 Protein of unknown function (DUF1292) JMUB1235_RS08325 PF03652 Holliday junction resolvase JMUB1235_RS08330 PF06135 IreB regulatory phosphoprotein JMUB1235_RS08335 PF03960 ArsC family JMUB1235_RS08340 PF00154 recA bacterial DNA recombination protein JMUB1235_RS08345 PF18146 Damage-inducible protein CinA KH domain JMUB1235_RS08345 PF00994 Probable molybdopterin binding domain JMUB1235_RS08345 PF02464 Competence-damaged protein JMUB1235_RS08350 PF03352 Methyladenine glycosylase JMUB1235_RS08350 PF00117 Glutamine amidotransferase class-I JMUB1235_RS08350 PF13302 Acetyltransferase (GNAT) domain JMUB1235_RS08350 PF00958 GMP synthase C terminal domain JMUB1235_RS08350 PF13673 Acetyltransferase (GNAT) domain JMUB1235_RS08355 PF07499 RuvA, C-terminal domain JMUB1235_RS08355 PF01330 RuvA N terminal domain JMUB1235_RS08365 PF01119 DNA mismatch repair protein, C-terminal domain JMUB1235_RS08365 PF08676 MutL C terminal dimerisation domain JMUB1235_RS08370 PF05192 MutS domain III JMUB1235_RS08370 PF05188 MutS domain II JMUB1235_RS08370 PF05190 MutS family domain IV JMUB1235_RS08370 PF00488 MutS domain V JMUB1235_RS08370 PF01624 MutS domain I JMUB1235_RS08380 PF02863 Arginine repressor, C-terminal domain JMUB1235_RS08380 PF01316 Arginine repressor, DNA binding domain JMUB1235_RS08385 PF05746 DALR anticodon binding domain JMUB1235_RS08385 PF03485 Arginyl tRNA synthetase N terminal domain JMUB1235_RS08385 PF00750 tRNA synthetases class I (R) JMUB1235_RS08395 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMUB1235_RS08395 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMUB1235_RS08400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMUB1235_RS08400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMUB1235_RS08405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMUB1235_RS08405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMUB1235_RS08410 PF00152 tRNA synthetases class II (D, K and N) JMUB1235_RS08410 PF01336 OB-fold nucleic acid binding domain JMUB1235_RS08410 PF02938 GAD domain JMUB1235_RS08415 PF13393 Histidyl-tRNA synthetase JMUB1235_RS08415 PF03129 Anticodon binding domain JMUB1235_RS08420 PF01783 Ribosomal L32p protein family JMUB1235_RS08425 PF00471 Ribosomal protein L33 JMUB1235_RS08440 PF01022 Bacterial regulatory protein, arsR family JMUB1235_RS08470 PF00293 NUDIX domain JMUB1235_RS08475 PF03551 Transcriptional regulator PadR-like family JMUB1235_RS08500 PF01479 S4 domain JMUB1235_RS08500 PF00163 Ribosomal protein S4/S9 N-terminal domain JMUB1235_RS08510 PF01609 Transposase DDE domain JMUB1235_RS08510 PF13808 DDE_Tnp_1-associated JMUB1235_RS08520 PF00772 DnaB-like helicase N terminal domain JMUB1235_RS08520 PF03796 DnaB-like helicase C terminal domain JMUB1235_RS08525 PF03948 Ribosomal protein L9, C-terminal domain JMUB1235_RS08525 PF01281 Ribosomal protein L9, N-terminal domain JMUB1235_RS08530 PF01368 DHH family JMUB1235_RS08530 PF02272 DHHA1 domain JMUB1235_RS08535 PF13932 GidA associated domain JMUB1235_RS08535 PF01134 Glucose inhibited division protein A JMUB1235_RS08550 PF03315 Serine dehydratase beta chain JMUB1235_RS08550 PF01842 ACT domain JMUB1235_RS08555 PF03313 Serine dehydratase alpha chain JMUB1235_RS08560 PF06737 Transglycosylase-like domain JMUB1235_RS08565 PF02361 Cobalt transport protein JMUB1235_RS08570 PF00005 ABC transporter JMUB1235_RS08575 PF00005 ABC transporter JMUB1235_RS08580 PF01066 CDP-alcohol phosphatidyltransferase JMUB1235_RS08590 PF05193 Peptidase M16 inactive domain JMUB1235_RS08590 PF00675 Insulinase (Peptidase family M16) JMUB1235_RS08605 PF02463 RecF/RecN/SMC N terminal domain JMUB1235_RS08610 PF06800 Sugar transport protein JMUB1235_RS08615 PF00571 CBS domain JMUB1235_RS08615 PF00478 IMP dehydrogenase / GMP reductase domain JMUB1235_RS08620 PF00579 tRNA synthetases class I (W and Y) JMUB1235_RS08625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMUB1235_RS08625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMUB1235_RS08630 PF00005 ABC transporter JMUB1235_RS08630 PF12848 ABC transporter JMUB1235_RS08670 PF02590 Predicted SPOUT methyltransferase JMUB1235_RS08675 PF13180 PDZ domain JMUB1235_RS08680 PF02195 ParB-like nuclease domain JMUB1235_RS08680 PF17762 HTH domain found in ParB protein