CCX85_RS00005 PF00308 Bacterial dnaA protein CCX85_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CCX85_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CCX85_RS00010 PF02767 DNA polymerase III beta subunit, central domain CCX85_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CCX85_RS00015 PF06107 CCX85_RS00015 CCX85_RS00020 PF01926 50S ribosome-binding GTPase CCX85_RS00020 PF06071 Protein of unknown function (DUF933) CCX85_RS00025 PF01195 Peptidyl-tRNA hydrolase CCX85_RS00030 PF00270 DEAD/DEAH box helicase CCX85_RS00030 PF00271 Helicase conserved C-terminal domain CCX85_RS00030 PF02559 CarD-like/TRCF domain CCX85_RS00030 PF03461 TRCF domain CCX85_RS00035 PF01479 S4 domain CCX85_RS00040 PF04977 Septum formation initiator CCX85_RS00045 PF13354 Beta-lactamase enzyme family CCX85_RS00050 PF01171 PP-loop family CCX85_RS00055 PF00156 Phosphoribosyl transferase domain CCX85_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) CCX85_RS00060 PF01434 Peptidase family M41 CCX85_RS00060 PF06480 FtsH Extracellular CCX85_RS00065 PF13520 Amino acid permease CCX85_RS00240 PF05257 CHAP domain CCX85_RS00245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CCX85_RS00245 PF14572 Phosphoribosyl synthetase-associated domain CCX85_RS00250 PF02565 Recombination protein O C terminal CCX85_RS00250 PF11967 Recombination protein O N terminal CCX85_RS00255 PF02504 Fatty acid synthesis protein CCX85_RS00260 PF00550 Phosphopantetheine attachment site CCX85_RS00265 PF01259 SAICAR synthetase CCX85_RS00270 PF02769 AIR synthase related protein, C-terminal domain CCX85_RS00270 PF13507 CobB/CobQ-like glutamine amidotransferase domain CCX85_RS00275 PF00156 Phosphoribosyl transferase domain CCX85_RS00275 PF13537 Glutamine amidotransferase domain CCX85_RS00280 PF00586 AIR synthase related protein, N-terminal domain CCX85_RS00280 PF02769 AIR synthase related protein, C-terminal domain CCX85_RS00285 PF00551 Formyl transferase CCX85_RS00290 PF01808 AICARFT/IMPCHase bienzyme CCX85_RS00290 PF02142 MGS-like domain CCX85_RS00295 PF05257 CHAP domain CCX85_RS00295 PF08460 Bacterial SH3 domain CCX85_RS00300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CCX85_RS00300 PF02843 Phosphoribosylglycinamide synthetase, C domain CCX85_RS00300 PF02844 Phosphoribosylglycinamide synthetase, N domain CCX85_RS00305 PF00731 AIR carboxylase CCX85_RS00310 PF02222 ATP-grasp domain CCX85_RS00320 PF00206 Lyase CCX85_RS00320 PF10397 Adenylosuccinate lyase C-terminus CCX85_RS00325 PF01381 Helix-turn-helix CCX85_RS00330 PF05491 Holliday junction DNA helicase ruvB C-terminus CCX85_RS00330 PF05496 Holliday junction DNA helicase ruvB N-terminus CCX85_RS00335 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCX85_RS00340 PF02493 MORN repeat CCX85_RS00345 PF01757 CCX85_RS00345 CCX85_RS00350 PF00171 Aldehyde dehydrogenase family CCX85_RS00350 PF00465 Iron-containing alcohol dehydrogenase CCX85_RS00355 PF00107 Zinc-binding dehydrogenase CCX85_RS00355 PF08240 Alcohol dehydrogenase GroES-like domain CCX85_RS00360 PF01554 MatE CCX85_RS00365 PF00338 Ribosomal protein S10p/S20e CCX85_RS00370 PF00297 Ribosomal protein L3 CCX85_RS00375 PF00573 Ribosomal protein L4/L1 family CCX85_RS00380 PF00276 Ribosomal protein L23 CCX85_RS00385 PF00181 Ribosomal Proteins L2, RNA binding domain CCX85_RS00385 PF03947 Ribosomal Proteins L2, C-terminal domain CCX85_RS00390 PF00203 Ribosomal protein S19 CCX85_RS00395 PF00237 Ribosomal protein L22p/L17e CCX85_RS00400 PF00189 Ribosomal protein S3, C-terminal domain CCX85_RS00400 PF07650 KH domain CCX85_RS00405 PF00252 Ribosomal protein L16p/L10e CCX85_RS00410 PF00831 Ribosomal L29 protein CCX85_RS00415 PF00366 Ribosomal protein S17 CCX85_RS00420 PF00238 Ribosomal protein L14p/L23e CCX85_RS00425 PF00467 KOW motif CCX85_RS00425 PF17136 CCX85_RS00425 CCX85_RS00430 PF00281 Ribosomal protein L5 CCX85_RS00430 PF00673 ribosomal L5P family C-terminus CCX85_RS00435 PF00253 Ribosomal protein S14p/S29e CCX85_RS00440 PF00410 Ribosomal protein S8 CCX85_RS00445 PF00347 Ribosomal protein L6 CCX85_RS00450 PF00861 Ribosomal L18p/L5e family CCX85_RS00455 PF00333 Ribosomal protein S5, N-terminal domain CCX85_RS00455 PF03719 Ribosomal protein S5, C-terminal domain CCX85_RS00460 PF00327 Ribosomal protein L30p/L7e CCX85_RS00465 PF00828 Ribosomal protein L18e/L15 CCX85_RS00470 PF00344 SecY translocase CCX85_RS00475 PF00406 Adenylate kinase CCX85_RS00480 PF01176 Translation initiation factor 1A / IF-1 CCX85_RS00485 PF00444 Ribosomal protein L36 CCX85_RS00490 PF00416 Ribosomal protein S13/S18 CCX85_RS00495 PF00411 Ribosomal protein S11 CCX85_RS00500 PF01000 RNA polymerase Rpb3/RpoA insert domain CCX85_RS00500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CCX85_RS00500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CCX85_RS00505 PF01196 Ribosomal protein L17 CCX85_RS00600 PF00288 GHMP kinases N terminal domain CCX85_RS00605 PF08544 GHMP kinases C terminal CCX85_RS00610 PF01047 MarR family CCX85_RS00615 PF00005 ABC transporter CCX85_RS00620 PF00950 CCX85_RS00620 CCX85_RS00625 PF01230 HIT domain CCX85_RS00630 PF00579 tRNA synthetases class I (W and Y) CCX85_RS00630 PF01479 S4 domain CCX85_RS00635 PF00905 Penicillin binding protein transpeptidase domain CCX85_RS00635 PF00912 Transglycosylase CCX85_RS00640 PF00562 RNA polymerase Rpb2, domain 6 CCX85_RS00640 PF04560 RNA polymerase Rpb2, domain 7 CCX85_RS00640 PF04561 RNA polymerase Rpb2, domain 2 CCX85_RS00640 PF04563 RNA polymerase beta subunit CCX85_RS00640 PF04565 RNA polymerase Rpb2, domain 3 CCX85_RS00640 PF10385 RNA polymerase beta subunit external 1 domain CCX85_RS00645 PF00623 RNA polymerase Rpb1, domain 2 CCX85_RS00645 PF04983 RNA polymerase Rpb1, domain 3 CCX85_RS00645 PF04997 RNA polymerase Rpb1, domain 1 CCX85_RS00645 PF04998 RNA polymerase Rpb1, domain 5 CCX85_RS00645 PF05000 RNA polymerase Rpb1, domain 4 CCX85_RS00650 PF06279 CCX85_RS00650 CCX85_RS00655 PF00437 Type II/IV secretion system protein CCX85_RS00660 PF00482 Type II secretion system (T2SS), protein F CCX85_RS00665 PF07963 Prokaryotic N-terminal methylation motif CCX85_RS00675 PF11773 CCX85_RS00675 CCX85_RS00680 PF15980 CCX85_RS00680 CCX85_RS00690 PF02384 N-6 DNA Methylase CCX85_RS00695 PF00871 Acetokinase family CCX85_RS00705 PF03807 NADP oxidoreductase coenzyme F420-dependent CCX85_RS00705 PF14748 Pyrroline-5-carboxylate reductase dimerisation CCX85_RS00710 PF05343 M42 glutamyl aminopeptidase CCX85_RS00720 PF15513 Domain of unknown function (DUF4651) CCX85_RS00725 PF00085 Thioredoxin CCX85_RS00730 PF01588 Putative tRNA binding domain CCX85_RS00730 PF14794 Domain of unknown function (DUF4479) CCX85_RS00735 PF00436 Single-strand binding protein family CCX85_RS00740 PF01712 Deoxynucleoside kinase CCX85_RS00745 PF01207 Dihydrouridine synthase (Dus) CCX85_RS00750 PF01430 Hsp33 protein CCX85_RS00755 PF05043 Mga helix-turn-helix domain CCX85_RS00755 PF08270 CCX85_RS00755 CCX85_RS00755 PF08280 M protein trans-acting positive regulator (MGA) HTH domain CCX85_RS00760 PF08341 Fibronectin-binding protein signal sequence CCX85_RS00765 PF10502 Signal peptidase, peptidase S26 CCX85_RS00775 PF04203 Sortase family CCX85_RS00780 PF12892 T surface-antigen of pili CCX85_RS00785 PF12833 Helix-turn-helix domain CCX85_RS00790 PF02986 Fibronectin binding repeat CCX85_RS00790 PF05738 Cna protein B-type domain CCX85_RS00790 PF08341 Fibronectin-binding protein signal sequence CCX85_RS00800 PF02667 CCX85_RS00800 CCX85_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCX85_RS00805 PF03466 LysR substrate binding domain CCX85_RS00810 PF00108 Thiolase, N-terminal domain CCX85_RS00810 PF02803 Thiolase, C-terminal domain CCX85_RS00815 PF01144 Coenzyme A transferase CCX85_RS00820 PF01144 Coenzyme A transferase CCX85_RS00825 PF08348 CCX85_RS00825 CCX85_RS00825 PF13309 CCX85_RS00825 CCX85_RS00830 PF01042 Endoribonuclease L-PSP CCX85_RS00835 PF13303 CCX85_RS00835 CCX85_RS00845 PF01496 V-type ATPase 116kDa subunit family CCX85_RS00850 PF00137 ATP synthase subunit C CCX85_RS00860 PF01992 ATP synthase (C/AC39) subunit CCX85_RS00865 PF01990 ATP synthase (F/14-kDa) subunit CCX85_RS00870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCX85_RS00870 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCX85_RS00870 PF16886 CCX85_RS00870 CCX85_RS00875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCX85_RS00875 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCX85_RS00880 PF01813 ATP synthase subunit D CCX85_RS00885 PF05816 CCX85_RS00885 CCX85_RS00895 PF00709 Adenylosuccinate synthetase CCX85_RS00900 PF02608 Basic membrane protein CCX85_RS00905 PF00467 KOW motif CCX85_RS00905 PF02357 Transcription termination factor nusG CCX85_RS00910 PF07461 Nicotine adenine dinucleotide glycohydrolase (NADase) CCX85_RS00915 PF16718 CCX85_RS00915 CCX85_RS00920 PF01289 Thiol-activated cytolysin CCX85_RS00920 PF17440 CCX85_RS00920 CCX85_RS00940 PF01053 Cys/Met metabolism PLP-dependent enzyme CCX85_RS00945 PF00133 tRNA synthetases class I (I, L, M and V) CCX85_RS00945 PF08264 Anticodon-binding domain of tRNA CCX85_RS00945 PF09334 tRNA synthetases class I (M) CCX85_RS00945 PF13603 Leucyl-tRNA synthetase, Domain 2 CCX85_RS00950 PF03611 CCX85_RS00950 CCX85_RS00955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS00960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCX85_RS00965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CCX85_RS00970 PF01261 Xylose isomerase-like TIM barrel CCX85_RS00975 PF00596 Class II Aldolase and Adducin N-terminal domain CCX85_RS00985 PF00874 PRD domain CCX85_RS00985 PF08279 HTH domain CCX85_RS00990 PF13483 Beta-lactamase superfamily domain CCX85_RS00995 PF00005 ABC transporter CCX85_RS00995 PF00571 CBS domain CCX85_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CCX85_RS01005 PF00476 DNA polymerase family A CCX85_RS01005 PF01367 5'-3' exonuclease, C-terminal SAM fold CCX85_RS01005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCX85_RS01010 PF13380 CoA binding domain CCX85_RS01015 PF01475 Ferric uptake regulator family CCX85_RS01020 PF06161 CCX85_RS01020 CCX85_RS01030 PF01702 Queuine tRNA-ribosyltransferase CCX85_RS01035 PF05495 CHY zinc finger CCX85_RS01040 PF02632 BioY family CCX85_RS01045 PF12706 Beta-lactamase superfamily domain CCX85_RS01050 PF14437 CCX85_RS01050 CCX85_RS01055 PF01841 Transglutaminase-like superfamily CCX85_RS01070 PF00342 Phosphoglucose isomerase CCX85_RS01075 PF05043 Mga helix-turn-helix domain CCX85_RS01075 PF08270 CCX85_RS01075 CCX85_RS01075 PF08280 M protein trans-acting positive regulator (MGA) HTH domain CCX85_RS01080 PF01694 Rhomboid family CCX85_RS01085 PF00483 Nucleotidyl transferase CCX85_RS01090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CCX85_RS01090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CCX85_RS01095 PF12802 MarR family CCX85_RS01100 PF00005 ABC transporter CCX85_RS01100 PF00664 ABC transporter transmembrane region CCX85_RS01105 PF00005 ABC transporter CCX85_RS01105 PF00664 ABC transporter transmembrane region CCX85_RS01110 PF02677 CCX85_RS01110 CCX85_RS01115 PF00692 dUTPase CCX85_RS01120 PF13481 AAA domain CCX85_RS01120 PF13541 Subunit ChlI of Mg-chelatase CCX85_RS01125 PF00484 Carbonic anhydrase CCX85_RS01130 PF01987 Mitochondrial biogenesis AIM24 CCX85_RS01135 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCX85_RS01140 PF14501 GHKL domain CCX85_RS01145 PF14501 GHKL domain CCX85_RS01150 PF00072 Response regulator receiver domain CCX85_RS01150 PF04397 LytTr DNA-binding domain CCX85_RS01155 PF00825 Ribonuclease P CCX85_RS01160 PF02096 60Kd inner membrane protein CCX85_RS01165 PF01424 R3H domain CCX85_RS01165 PF13083 KH domain CCX85_RS01165 PF14804 Jag N-terminus CCX85_RS01170 PF00468 Ribosomal protein L34 CCX85_RS01175 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CCX85_RS01180 PF01547 Bacterial extracellular solute-binding protein CCX85_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01190 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01195 PF04854 CCX85_RS01195 CCX85_RS01200 PF00701 Dihydrodipicolinate synthetase family CCX85_RS01205 PF00480 ROK family CCX85_RS01210 PF01380 SIS domain CCX85_RS01210 PF01418 Helix-turn-helix domain, rpiR family CCX85_RS01215 PF01026 TatD related DNase CCX85_RS01220 PF13331 CCX85_RS01220 CCX85_RS01220 PF13662 Toprim domain CCX85_RS01225 PF00398 Ribosomal RNA adenine dimethylase CCX85_RS01230 PF03193 Protein of unknown function, DUF258 CCX85_RS01230 PF16745 CCX85_RS01230 CCX85_RS01235 PF00834 Ribulose-phosphate 3 epimerase family CCX85_RS01240 PF04263 Thiamin pyrophosphokinase, catalytic domain CCX85_RS01240 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CCX85_RS01245 PF02646 CCX85_RS01245 CCX85_RS01250 PF01966 HD domain CCX85_RS01255 PF00156 Phosphoribosyl transferase domain CCX85_RS01255 PF09182 Bacterial purine repressor, N-terminal CCX85_RS01265 PF00164 Ribosomal protein S12/S23 CCX85_RS01270 PF00177 Ribosomal protein S7p/S5e CCX85_RS01275 PF00009 Elongation factor Tu GTP binding domain CCX85_RS01275 PF00679 Elongation factor G C-terminus CCX85_RS01275 PF03144 Elongation factor Tu domain 2 CCX85_RS01275 PF03764 Elongation factor G, domain IV CCX85_RS01275 PF14492 Elongation Factor G, domain II CCX85_RS01280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCX85_RS01280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CCX85_RS01290 PF00005 ABC transporter CCX85_RS01295 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCX85_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01300 PF09972 CCX85_RS01300 CCX85_RS01305 PF02673 CCX85_RS01305 CCX85_RS01310 PF05389 Negative regulator of genetic competence (MecA) CCX85_RS01315 PF00953 Glycosyl transferase family 4 CCX85_RS01320 PF00005 ABC transporter CCX85_RS01325 PF01458 Uncharacterized protein family (UPF0051) CCX85_RS01330 PF00266 Aminotransferase class-V CCX85_RS01335 PF01592 NifU-like N terminal domain CCX85_RS01340 PF01458 Uncharacterized protein family (UPF0051) CCX85_RS01345 PF00768 D-alanyl-D-alanine carboxypeptidase CCX85_RS01345 PF01351 Ribonuclease HII CCX85_RS01350 PF00768 D-alanyl-D-alanine carboxypeptidase CCX85_RS01350 PF07943 Penicillin-binding protein 5, C-terminal domain CCX85_RS01355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCX85_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01365 PF12911 CCX85_RS01365 CCX85_RS01370 PF00005 ABC transporter CCX85_RS01370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCX85_RS01375 PF00005 ABC transporter CCX85_RS01375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCX85_RS01420 PF13419 Haloacid dehalogenase-like hydrolase CCX85_RS01425 PF01926 50S ribosome-binding GTPase CCX85_RS01430 PF01985 CRS1 / YhbY (CRM) domain CCX85_RS01435 PF01467 Cytidylyltransferase CCX85_RS01440 PF01966 HD domain CCX85_RS01445 PF02410 Oligomerisation domain CCX85_RS01450 PF13649 Methyltransferase domain CCX85_RS01455 PF05636 HIGH Nucleotidyl Transferase CCX85_RS01465 PF01709 Transcriptional regulator CCX85_RS01470 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCX85_RS01475 PF03180 NLPA lipoprotein CCX85_RS01480 PF00005 ABC transporter CCX85_RS01480 PF09383 NIL domain CCX85_RS01485 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS01490 PF05525 CCX85_RS01490 CCX85_RS01495 PF00375 Sodium:dicarboxylate symporter family CCX85_RS01500 PF02254 TrkA-N domain CCX85_RS01505 PF02386 Cation transport protein CCX85_RS01510 PF02527 rRNA small subunit methyltransferase G CCX85_RS01515 PF04011 LemA family CCX85_RS01520 PF01435 Peptidase family M48 CCX85_RS01525 PF02620 CCX85_RS01525 CCX85_RS01530 PF00072 Response regulator receiver domain CCX85_RS01530 PF00486 Transcriptional regulatory protein, C terminal CCX85_RS01535 PF00512 His Kinase A (phospho-acceptor) domain CCX85_RS01535 PF00672 HAMP domain CCX85_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS01540 PF03477 ATP cone domain CCX85_RS01545 PF07261 Replication initiation and membrane attachment CCX85_RS01550 PF01695 IstB-like ATP binding protein CCX85_RS01550 PF07319 Primosomal protein DnaI N-terminus CCX85_RS01555 PF01926 50S ribosome-binding GTPase CCX85_RS01555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CCX85_RS01560 PF00176 SNF2 family N-terminal domain CCX85_RS01560 PF00271 Helicase conserved C-terminal domain CCX85_RS01560 PF04434 CCX85_RS01560 CCX85_RS01560 PF08455 CCX85_RS01560 CCX85_RS01570 PF01225 Mur ligase family, catalytic domain CCX85_RS01570 PF02875 Mur ligase family, glutamate ligase domain CCX85_RS01570 PF08245 Mur ligase middle domain CCX85_RS01575 PF00583 Acetyltransferase (GNAT) family CCX85_RS01580 PF02618 YceG-like family CCX85_RS01585 PF01272 Transcription elongation factor, GreA/GreB, C-term CCX85_RS01585 PF03449 Transcription elongation factor, N-terminal CCX85_RS01590 PF02096 60Kd inner membrane protein CCX85_RS01595 PF00708 Acylphosphatase CCX85_RS01600 PF00588 SpoU rRNA Methylase family CCX85_RS01600 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCX85_RS01610 PF01027 Inhibitor of apoptosis-promoting Bax1 CCX85_RS01615 PF03672 CCX85_RS01615 CCX85_RS01620 PF01177 Asp/Glu/Hydantoin racemase CCX85_RS01625 PF01725 Ham1 family CCX85_RS01630 PF12850 Calcineurin-like phosphoesterase superfamily domain CCX85_RS01635 PF00571 CBS domain CCX85_RS01640 PF00589 Phage integrase family CCX85_RS01645 PF02616 ScpA/B protein CCX85_RS01650 PF04079 Putative transcriptional regulators (Ypuh-like) CCX85_RS01655 PF00849 RNA pseudouridylate synthase CCX85_RS01655 PF01479 S4 domain CCX85_RS01660 PF01809 CCX85_RS01660 CCX85_RS01665 PF00588 SpoU rRNA Methylase family CCX85_RS01670 PF12822 Protein of unknown function (DUF3816) CCX85_RS01675 PF01569 PAP2 superfamily CCX85_RS01680 PF04055 Radical SAM superfamily CCX85_RS01680 PF16199 CCX85_RS01680 CCX85_RS01685 PF06962 Putative rRNA methylase CCX85_RS01690 PF00571 CBS domain CCX85_RS01690 PF01595 CCX85_RS01690 CCX85_RS01690 PF03471 Transporter associated domain CCX85_RS01695 PF04055 Radical SAM superfamily CCX85_RS01695 PF13353 4Fe-4S single cluster domain CCX85_RS01700 PF01368 DHH family CCX85_RS01700 PF02833 DHHA2 domain CCX85_RS01705 PF08820 CCX85_RS01705 CCX85_RS01710 PF01032 FecCD transport family CCX85_RS01715 PF01032 FecCD transport family CCX85_RS01720 PF01497 Periplasmic binding protein CCX85_RS01725 PF00005 ABC transporter CCX85_RS01730 PF02875 Mur ligase family, glutamate ligase domain CCX85_RS01730 PF08245 Mur ligase middle domain CCX85_RS01735 PF01943 CCX85_RS01735 CCX85_RS01735 PF14667 Polysaccharide biosynthesis C-terminal domain CCX85_RS01740 PF14681 Uracil phosphoribosyltransferase CCX85_RS01750 PF00574 Clp protease CCX85_RS01755 PF09902 CCX85_RS01755 CCX85_RS01760 PF02223 Thymidylate kinase CCX85_RS01765 PF13177 DNA polymerase III, delta subunit CCX85_RS01775 PF06156 CCX85_RS01775 CCX85_RS01780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCX85_RS01790 PF03932 CutC family CCX85_RS01795 PF03960 ArsC family CCX85_RS01800 PF03372 Endonuclease/Exonuclease/phosphatase family CCX85_RS01810 PF01070 FMN-dependent dehydrogenase CCX85_RS01815 PF00082 Subtilase family CCX85_RS01815 PF02225 PA domain CCX85_RS01815 PF04650 CCX85_RS01815 CCX85_RS01815 PF06280 Fn3-like domain (DUF1034) CCX85_RS01825 PF06912 CCX85_RS01825 CCX85_RS01830 PF01588 Putative tRNA binding domain CCX85_RS01830 PF09334 tRNA synthetases class I (M) CCX85_RS01835 PF00268 Ribonucleotide reductase, small chain CCX85_RS01840 PF07972 NrdI Flavodoxin like CCX85_RS01845 PF00317 Ribonucleotide reductase, all-alpha domain CCX85_RS01845 PF02867 Ribonucleotide reductase, barrel domain CCX85_RS01845 PF08343 Ribonucleotide reductase N-terminal CCX85_RS01850 PF03496 ADP-ribosyltransferase exoenzyme CCX85_RS01885 PF11195 CCX85_RS01885 CCX85_RS01890 PF13561 Enoyl-(Acyl carrier protein) reductase CCX85_RS01895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCX85_RS01895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCX85_RS01900 PF07690 Major Facilitator Superfamily CCX85_RS01905 PF00132 Bacterial transferase hexapeptide (six repeats) CCX85_RS01905 PF00483 Nucleotidyl transferase CCX85_RS01905 PF14602 Hexapeptide repeat of succinyl-transferase CCX85_RS01910 PF00293 NUDIX domain CCX85_RS01920 PF01048 Phosphorylase superfamily CCX85_RS01930 PF01325 Iron dependent repressor, N-terminal DNA binding domain CCX85_RS01930 PF02742 Iron dependent repressor, metal binding and dimerisation domain CCX85_RS01930 PF04023 FeoA domain CCX85_RS01935 PF01297 Periplasmic solute binding protein family CCX85_RS01940 PF00005 ABC transporter CCX85_RS01945 PF00950 CCX85_RS01945 CCX85_RS01950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCX85_RS01955 PF01580 FtsK/SpoIIIE family CCX85_RS01955 PF09397 Ftsk gamma domain CCX85_RS01960 PF11877 CCX85_RS01960 CCX85_RS01965 PF00298 Ribosomal protein L11, RNA binding domain CCX85_RS01965 PF03946 Ribosomal protein L11, N-terminal domain CCX85_RS01970 PF00687 Ribosomal protein L1p/L10e family CCX85_RS01975 PF00696 Amino acid kinase family CCX85_RS01980 PF01765 Ribosome recycling factor CCX85_RS01985 PF13509 S1 domain CCX85_RS01990 PF01625 Peptide methionine sulfoxide reductase CCX85_RS01995 PF06855 Protein of unknown function (DUF1250) CCX85_RS02000 PF01476 LysM domain CCX85_RS02005 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family CCX85_RS02010 PF02562 PhoH-like protein CCX85_RS02015 PF03167 Uracil DNA glycosylase superfamily CCX85_RS02020 PF02130 Uncharacterized protein family UPF0054 CCX85_RS02025 PF01219 Prokaryotic diacylglycerol kinase CCX85_RS02030 PF01926 50S ribosome-binding GTPase CCX85_RS02030 PF07650 KH domain CCX85_RS02035 PF00293 NUDIX domain CCX85_RS02050 PF00005 ABC transporter CCX85_RS02055 PF00664 ABC transporter transmembrane region CCX85_RS02060 PF03412 Peptidase C39 family CCX85_RS02065 PF10439 CCX85_RS02065 CCX85_RS02070 PF02517 CAAX protease self-immunity CCX85_RS02075 PF10439 CCX85_RS02075 CCX85_RS02095 PF00072 Response regulator receiver domain CCX85_RS02095 PF04397 LytTr DNA-binding domain CCX85_RS02100 PF14501 GHKL domain CCX85_RS02105 PF03047 CCX85_RS02105 CCX85_RS02110 PF13437 HlyD family secretion protein CCX85_RS02115 PF00005 ABC transporter CCX85_RS02115 PF00664 ABC transporter transmembrane region CCX85_RS02115 PF03412 Peptidase C39 family CCX85_RS02120 PF10439 CCX85_RS02120 CCX85_RS02160 PF01381 Helix-turn-helix CCX85_RS02165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCX85_RS02165 PF06827 Zinc finger found in FPG and IleRS CCX85_RS02165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCX85_RS02170 PF01121 Dephospho-CoA kinase CCX85_RS02175 PF05872 CCX85_RS02175 CCX85_RS02180 PF07690 Major Facilitator Superfamily CCX85_RS02185 PF00471 Ribosomal protein L33 CCX85_RS02190 PF03840 Preprotein translocase SecG subunit CCX85_RS02195 PF00575 S1 RNA binding domain CCX85_RS02195 PF00773 RNB domain CCX85_RS02195 PF08206 Ribonuclease B OB domain CCX85_RS02200 PF01668 SmpB protein CCX85_RS02205 PF05096 Glutamine cyclotransferase CCX85_RS02210 PF01470 Pyroglutamyl peptidase CCX85_RS02215 PF06166 CCX85_RS02215 CCX85_RS02220 PF06149 CCX85_RS02220 CCX85_RS02225 PF00535 Glycosyl transferase family 2 CCX85_RS02230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCX85_RS02235 PF00881 Nitroreductase family CCX85_RS02240 PF00557 Metallopeptidase family M24 CCX85_RS02240 PF01321 Creatinase/Prolidase N-terminal domain CCX85_RS02245 PF00356 Bacterial regulatory proteins, lacI family CCX85_RS02245 PF13377 Periplasmic binding protein-like domain CCX85_RS02250 PF00534 Glycosyl transferases group 1 CCX85_RS02250 PF13439 Glycosyltransferase Family 4 CCX85_RS02255 PF00534 Glycosyl transferases group 1 CCX85_RS02255 PF13439 Glycosyltransferase Family 4 CCX85_RS02260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCX85_RS02260 PF02824 TGS domain CCX85_RS02260 PF03129 Anticodon binding domain CCX85_RS02260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCX85_RS02270 PF06182 CCX85_RS02270 CCX85_RS02275 PF06182 CCX85_RS02275 CCX85_RS02285 PF00108 Thiolase, N-terminal domain CCX85_RS02285 PF02803 Thiolase, C-terminal domain CCX85_RS02290 PF00501 AMP-binding enzyme CCX85_RS02295 PF11311 CCX85_RS02295 CCX85_RS02300 PF00072 Response regulator receiver domain CCX85_RS02300 PF00486 Transcriptional regulatory protein, C terminal CCX85_RS02305 PF00512 His Kinase A (phospho-acceptor) domain CCX85_RS02305 PF00989 PAS fold CCX85_RS02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS02310 PF00753 Metallo-beta-lactamase superfamily CCX85_RS02315 PF00035 Double-stranded RNA binding motif CCX85_RS02315 PF14622 Ribonuclease-III-like CCX85_RS02320 PF02463 RecF/RecN/SMC N terminal domain CCX85_RS02320 PF06470 SMC proteins Flexible Hinge Domain CCX85_RS02330 PF08501 Shikimate dehydrogenase substrate binding domain CCX85_RS02335 PF01261 Xylose isomerase-like TIM barrel CCX85_RS02340 PF01996 F420-0:Gamma-glutamyl ligase CCX85_RS02350 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) CCX85_RS02360 PF00535 Glycosyl transferase family 2 CCX85_RS02370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCX85_RS02370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCX85_RS02370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCX85_RS02375 PF07690 Major Facilitator Superfamily CCX85_RS02380 PF13443 Cro/C1-type HTH DNA-binding domain CCX85_RS02385 PF10088 CCX85_RS02385 CCX85_RS02400 PF04221 RelB antitoxin CCX85_RS02405 PF05016 Plasmid stabilisation system protein CCX85_RS02415 PF04860 Phage portal protein CCX85_RS02425 PF02661 Fic/DOC family CCX85_RS02435 PF01710 Transposase CCX85_RS02440 PF13358 DDE superfamily endonuclease CCX85_RS02455 PF05977 Transmembrane secretion effector CCX85_RS02460 PF13649 Methyltransferase domain CCX85_RS02465 PF00152 tRNA synthetases class II (D, K and N) CCX85_RS02470 PF13535 ATP-grasp domain CCX85_RS02475 PF02016 LD-carboxypeptidase CCX85_RS02480 PF13393 Histidyl-tRNA synthetase CCX85_RS02490 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS02495 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS02500 PF00448 SRP54-type protein, GTPase domain CCX85_RS02500 PF02881 SRP54-type protein, helical bundle domain CCX85_RS02505 PF07690 Major Facilitator Superfamily CCX85_RS02510 PF00874 PRD domain CCX85_RS02510 PF03123 CAT RNA binding domain CCX85_RS02515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCX85_RS02515 PF00367 phosphotransferase system, EIIB CCX85_RS02515 PF02378 Phosphotransferase system, EIIC CCX85_RS02520 PF00232 Glycosyl hydrolase family 1 CCX85_RS02525 PF09323 CCX85_RS02525 CCX85_RS02530 PF03773 CCX85_RS02530 CCX85_RS02540 PF00575 S1 RNA binding domain CCX85_RS02540 PF09371 Tex-like protein N-terminal domain CCX85_RS02540 PF12836 Helix-hairpin-helix motif CCX85_RS02540 PF16921 CCX85_RS02540 CCX85_RS02550 PF04024 CCX85_RS02550 CCX85_RS02555 PF02603 HPr Serine kinase N terminus CCX85_RS02555 PF07475 HPr Serine kinase C-terminal domain CCX85_RS02560 PF01790 CCX85_RS02560 CCX85_RS02565 PF06103 CCX85_RS02565 CCX85_RS02570 PF12732 CCX85_RS02570 CCX85_RS02575 PF11674 CCX85_RS02575 CCX85_RS02580 PF01136 CCX85_RS02580 CCX85_RS02585 PF01136 CCX85_RS02585 CCX85_RS02585 PF16325 CCX85_RS02585 CCX85_RS02590 PF02229 Transcriptional Coactivator p15 (PC4) CCX85_RS02595 PF00152 tRNA synthetases class II (D, K and N) CCX85_RS02595 PF01336 OB-fold nucleic acid binding domain CCX85_RS02600 PF13419 Haloacid dehalogenase-like hydrolase CCX85_RS02605 PF00300 Histidine phosphatase superfamily (branch 1) CCX85_RS02610 PF04073 Aminoacyl-tRNA editing domain CCX85_RS02615 PF09515 Thiamine transporter protein (Thia_YuaJ) CCX85_RS02620 PF01183 Glycosyl hydrolases family 25 CCX85_RS02625 PF07155 ECF-type riboflavin transporter, S component CCX85_RS02630 PF14478 Domain of unknown function (DUF4430) CCX85_RS02635 PF00255 Glutathione peroxidase CCX85_RS02640 PF01432 Peptidase family M3 CCX85_RS02640 PF08439 Oligopeptidase F CCX85_RS02645 PF00311 Phosphoenolpyruvate carboxylase CCX85_RS02650 PF01098 CCX85_RS02650 CCX85_RS02655 PF00009 Elongation factor Tu GTP binding domain CCX85_RS02655 PF03143 Elongation factor Tu C-terminal domain CCX85_RS02655 PF03144 Elongation factor Tu domain 2 CCX85_RS02660 PF00121 Triosephosphate isomerase CCX85_RS02665 PF02388 FemAB family CCX85_RS02670 PF02388 FemAB family CCX85_RS02675 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS02685 PF01966 HD domain CCX85_RS02690 PF09148 Domain of unknown function (DUF1934) CCX85_RS02695 PF00122 E1-E2 ATPase CCX85_RS02695 PF00689 Cation transporting ATPase, C-terminus CCX85_RS02695 PF00690 Cation transporter/ATPase, N-terminus CCX85_RS02695 PF00702 haloacid dehalogenase-like hydrolase CCX85_RS02700 PF00356 Bacterial regulatory proteins, lacI family CCX85_RS02700 PF13407 Periplasmic binding protein domain CCX85_RS02705 PF07940 Heparinase II/III-like protein CCX85_RS02705 PF16889 CCX85_RS02705 CCX85_RS02710 PF03613 CCX85_RS02710 CCX85_RS02715 PF03609 CCX85_RS02715 CCX85_RS02720 PF03830 PTS system sorbose subfamily IIB component CCX85_RS02725 PF07470 Glycosyl Hydrolase Family 88 CCX85_RS02730 PF03610 PTS system fructose IIA component CCX85_RS02735 PF13561 Enoyl-(Acyl carrier protein) reductase CCX85_RS02740 PF02502 Ribose/Galactose Isomerase CCX85_RS02740 PF12408 Ribose-5-phosphate isomerase CCX85_RS02745 PF00294 pfkB family carbohydrate kinase CCX85_RS02750 PF01081 KDPG and KHG aldolase CCX85_RS02755 PF13419 Haloacid dehalogenase-like hydrolase CCX85_RS02760 PF08331 CCX85_RS02760 CCX85_RS02760 PF13484 CCX85_RS02760 CCX85_RS02770 PF00005 ABC transporter CCX85_RS02775 PF02687 CCX85_RS02775 CCX85_RS02780 PF00753 Metallo-beta-lactamase superfamily CCX85_RS02785 PF13561 Enoyl-(Acyl carrier protein) reductase CCX85_RS02790 PF00929 Exonuclease CCX85_RS02790 PF13307 Helicase C-terminal domain CCX85_RS02795 PF00155 Aminotransferase class I and II CCX85_RS02800 PF00152 tRNA synthetases class II (D, K and N) CCX85_RS02800 PF01336 OB-fold nucleic acid binding domain CCX85_RS02805 PF03668 CCX85_RS02805 CCX85_RS02810 PF01933 Uncharacterised protein family UPF0052 CCX85_RS02815 PF02650 WhiA C-terminal HTH domain CCX85_RS02815 PF10298 WhiA N-terminal LAGLIDADG-like domain CCX85_RS02815 PF14527 WhiA LAGLIDADG-like domain CCX85_RS02820 PF03577 CCX85_RS02820 CCX85_RS02825 PF01297 Periplasmic solute binding protein family CCX85_RS02825 PF09223 YodA lipocalin-like domain CCX85_RS02830 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS02830 PF07702 UTRA domain CCX85_RS02835 PF01380 SIS domain CCX85_RS02840 PF01197 Ribosomal protein L31 CCX85_RS02845 PF01368 DHH family CCX85_RS02845 PF02272 DHHA1 domain CCX85_RS02850 PF00258 Flavodoxin CCX85_RS02855 PF01817 Chorismate mutase type II CCX85_RS02860 PF00654 Voltage gated chloride channel CCX85_RS02865 PF01245 Ribosomal protein L19 CCX85_RS02880 PF13419 Haloacid dehalogenase-like hydrolase CCX85_RS02885 PF00204 DNA gyrase B CCX85_RS02885 PF00986 DNA gyrase B subunit, carboxyl terminus CCX85_RS02885 PF01751 Toprim domain CCX85_RS02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS02890 PF06160 CCX85_RS02890 CCX85_RS02895 PF07997 Protein of unknown function (DUF1694) CCX85_RS02900 PF00113 Enolase, C-terminal TIM barrel domain CCX85_RS02900 PF03952 Enolase, N-terminal domain CCX85_RS02910 PF05043 Mga helix-turn-helix domain CCX85_RS02910 PF08270 CCX85_RS02910 CCX85_RS02915 PF00746 CCX85_RS02915 CCX85_RS02915 PF07564 CCX85_RS02915 CCX85_RS02930 PF00881 Nitroreductase family CCX85_RS02940 PF02624 YcaO-like family CCX85_RS02945 PF02517 CAAX protease self-immunity CCX85_RS02955 PF00005 ABC transporter CCX85_RS02960 PF12698 ABC-2 family transporter protein CCX85_RS02965 PF12698 ABC-2 family transporter protein CCX85_RS02975 PF03372 Endonuclease/Exonuclease/phosphatase family CCX85_RS02980 PF06177 CCX85_RS02980 CCX85_RS02985 PF00533 BRCA1 C Terminus (BRCT) domain CCX85_RS02985 PF01653 NAD-dependent DNA ligase adenylation domain CCX85_RS02985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CCX85_RS02985 PF03120 NAD-dependent DNA ligase OB-fold domain CCX85_RS02985 PF12826 Helix-hairpin-helix motif CCX85_RS02985 PF14520 Helix-hairpin-helix domain CCX85_RS02990 PF00781 Diacylglycerol kinase catalytic domain CCX85_RS02995 PF00137 ATP synthase subunit C CCX85_RS03000 PF00119 ATP synthase A chain CCX85_RS03005 PF00430 ATP synthase B/B' CF(0) CCX85_RS03010 PF00213 ATP synthase delta (OSCP) subunit CCX85_RS03015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCX85_RS03015 PF00306 ATP synthase alpha/beta chain, C terminal domain CCX85_RS03015 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCX85_RS03020 PF00231 ATP synthase CCX85_RS03025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCX85_RS03025 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCX85_RS03030 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CCX85_RS03030 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CCX85_RS03035 PF06612 CCX85_RS03035 CCX85_RS03040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCX85_RS03045 PF11772 CCX85_RS03045 CCX85_RS03055 PF01409 tRNA synthetases class II core domain (F) CCX85_RS03055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CCX85_RS03060 PF01588 Putative tRNA binding domain CCX85_RS03060 PF03147 Ferredoxin-fold anticodon binding domain CCX85_RS03060 PF03483 B3/4 domain CCX85_RS03060 PF03484 tRNA synthetase B5 domain CCX85_RS03065 PF02566 OsmC-like protein CCX85_RS03070 PF08349 CCX85_RS03070 CCX85_RS03080 PF00005 ABC transporter CCX85_RS03085 PF04228 CCX85_RS03085 CCX85_RS03090 PF12705 PD-(D/E)XK nuclease superfamily CCX85_RS03095 PF00580 UvrD/REP helicase N-terminal domain CCX85_RS03095 PF12705 PD-(D/E)XK nuclease superfamily CCX85_RS03095 PF13361 UvrD-like helicase C-terminal domain CCX85_RS03100 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCX85_RS03105 PF01165 Ribosomal protein S21 CCX85_RS03110 PF01741 Large-conductance mechanosensitive channel, MscL CCX85_RS03115 PF01807 CHC2 zinc finger CCX85_RS03115 PF08275 DNA primase catalytic core, N-terminal domain CCX85_RS03115 PF10410 DnaB-helicase binding domain of primase CCX85_RS03115 PF13155 Toprim-like CCX85_RS03120 PF00140 Sigma-70 factor, region 1 CCX85_RS03120 PF03979 Sigma-70 factor, region 1 CCX85_RS03120 PF04539 Sigma-70 region 3 CCX85_RS03120 PF04542 Sigma-70 region 2 CCX85_RS03120 PF04545 Sigma-70, region 4 CCX85_RS03125 PF01883 Domain of unknown function DUF59 CCX85_RS03130 PF04321 RmlD substrate binding domain CCX85_RS03135 PF09314 CCX85_RS03135 CCX85_RS03140 PF00535 Glycosyl transferase family 2 CCX85_RS03145 PF01061 CCX85_RS03145 CCX85_RS03150 PF00005 ABC transporter CCX85_RS03155 PF00535 Glycosyl transferase family 2 CCX85_RS03160 PF05045 CCX85_RS03160 CCX85_RS03165 PF00884 Sulfatase CCX85_RS03170 PF00535 Glycosyl transferase family 2 CCX85_RS03175 PF10066 CCX85_RS03175 CCX85_RS03185 PF09913 CCX85_RS03185 CCX85_RS03190 PF01546 Peptidase family M20/M25/M40 CCX85_RS03190 PF07687 Peptidase dimerisation domain CCX85_RS03195 PF17255 CCX85_RS03195 CCX85_RS03200 PF13459 4Fe-4S single cluster domain CCX85_RS03210 PF02224 Cytidylate kinase CCX85_RS03215 PF00707 Translation initiation factor IF-3, C-terminal domain CCX85_RS03215 PF05198 Translation initiation factor IF-3, N-terminal domain CCX85_RS03220 PF01632 Ribosomal protein L35 CCX85_RS03225 PF00453 Ribosomal protein L20 CCX85_RS03230 PF00884 Sulfatase CCX85_RS03235 PF10672 S-adenosylmethionine-dependent methyltransferase CCX85_RS03240 PF01487 Type I 3-dehydroquinase CCX85_RS03245 PF01264 Chorismate synthase CCX85_RS03250 PF06133 Protein of unknown function (DUF964) CCX85_RS03255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCX85_RS03255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS03260 PF08245 Mur ligase middle domain CCX85_RS03270 PF00266 Aminotransferase class-V CCX85_RS03275 PF02568 Thiamine biosynthesis protein (ThiI) CCX85_RS03275 PF02926 THUMP domain CCX85_RS03280 PF09587 Bacterial capsule synthesis protein PGA_cap CCX85_RS03285 PF00829 Ribosomal prokaryotic L21 protein CCX85_RS03290 PF04327 Protein of unknown function (DUF464) CCX85_RS03295 PF01016 Ribosomal L27 protein CCX85_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCX85_RS03300 PF03466 LysR substrate binding domain CCX85_RS03305 PF01252 CCX85_RS03305 CCX85_RS03310 PF00849 RNA pseudouridylate synthase CCX85_RS03310 PF01479 S4 domain CCX85_RS03315 PF00156 Phosphoribosyl transferase domain CCX85_RS03320 PF00860 Permease family CCX85_RS03325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCX85_RS03325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCX85_RS03330 PF00117 Glutamine amidotransferase class-I CCX85_RS03330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CCX85_RS03340 PF02142 MGS-like domain CCX85_RS03340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCX85_RS03340 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CCX85_RS03345 PF16576 CCX85_RS03345 CCX85_RS03350 PF00005 ABC transporter CCX85_RS03355 PF02687 CCX85_RS03355 CCX85_RS03355 PF12704 MacB-like periplasmic core domain CCX85_RS03360 PF03009 Glycerophosphoryl diester phosphodiesterase family CCX85_RS03360 PF10110 CCX85_RS03360 CCX85_RS03365 PF00886 Ribosomal protein S16 CCX85_RS03370 PF13083 KH domain CCX85_RS03375 PF13306 Leucine rich repeats (6 copies) CCX85_RS03380 PF01243 Pyridoxamine 5'-phosphate oxidase CCX85_RS03385 PF01545 Cation efflux family CCX85_RS03390 PF00440 Bacterial regulatory proteins, tetR family CCX85_RS03390 PF14278 CCX85_RS03390 CCX85_RS03395 PF01782 RimM N-terminal domain CCX85_RS03395 PF05239 PRC-barrel domain CCX85_RS03400 PF01746 tRNA (Guanine-1)-methyltransferase CCX85_RS03405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS03410 PF13303 CCX85_RS03410 CCX85_RS03415 PF02558 Ketopantoate reductase PanE/ApbA CCX85_RS03415 PF08546 Ketopantoate reductase PanE/ApbA C terminal CCX85_RS03420 PF00455 CCX85_RS03420 CCX85_RS03420 PF08220 DeoR-like helix-turn-helix domain CCX85_RS03425 PF00294 pfkB family carbohydrate kinase CCX85_RS03430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCX85_RS03430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS03430 PF02378 Phosphotransferase system, EIIC CCX85_RS03435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CCX85_RS03440 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CCX85_RS03450 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain CCX85_RS03455 PF09028 Mac 1 CCX85_RS03465 PF06619 Protein of unknown function (DUF1149) CCX85_RS03470 PF02645 Uncharacterised protein, DegV family COG1307 CCX85_RS03475 PF01743 Poly A polymerase head domain CCX85_RS03475 PF12627 Probable RNA and SrmB- binding site of polymerase A CCX85_RS03475 PF13735 tRNA nucleotidyltransferase domain 2 putative CCX85_RS03480 PF00005 ABC transporter CCX85_RS03480 PF12848 ABC transporter CCX85_RS03480 PF16326 CCX85_RS03480 CCX85_RS03490 PF01327 Polypeptide deformylase CCX85_RS03495 PF00149 Calcineurin-like phosphoesterase CCX85_RS03495 PF02872 5'-nucleotidase, C-terminal domain CCX85_RS03500 PF04607 Region found in RelA / SpoT proteins CCX85_RS03505 PF00072 Response regulator receiver domain CCX85_RS03505 PF00486 Transcriptional regulatory protein, C terminal CCX85_RS03510 PF00512 His Kinase A (phospho-acceptor) domain CCX85_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS03515 PF00288 GHMP kinases N terminal domain CCX85_RS03515 PF08544 GHMP kinases C terminal CCX85_RS03520 PF00288 GHMP kinases N terminal domain CCX85_RS03520 PF08544 GHMP kinases C terminal CCX85_RS03525 PF00288 GHMP kinases N terminal domain CCX85_RS03525 PF08544 GHMP kinases C terminal CCX85_RS03530 PF01070 FMN-dependent dehydrogenase CCX85_RS03535 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CCX85_RS03540 PF00195 Chalcone and stilbene synthases, N-terminal domain CCX85_RS03540 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CCX85_RS03545 PF00303 Thymidylate synthase CCX85_RS03550 PF00186 Dihydrofolate reductase CCX85_RS03560 PF06689 ClpX C4-type zinc finger CCX85_RS03560 PF07724 AAA domain (Cdc48 subfamily) CCX85_RS03560 PF10431 C-terminal, D2-small domain, of ClpB protein CCX85_RS03565 PF01926 50S ribosome-binding GTPase CCX85_RS03575 PF00004 ATPase family associated with various cellular activities (AAA) CCX85_RS03575 PF07724 AAA domain (Cdc48 subfamily) CCX85_RS03575 PF10431 C-terminal, D2-small domain, of ClpB protein CCX85_RS03580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CCX85_RS03585 PF01676 Metalloenzyme superfamily CCX85_RS03590 PF03960 ArsC family CCX85_RS03595 PF01048 Phosphorylase superfamily CCX85_RS03600 PF01048 Phosphorylase superfamily CCX85_RS03605 PF09659 CCX85_RS03605 CCX85_RS03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCX85_RS03610 PF03466 LysR substrate binding domain CCX85_RS03620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CCX85_RS03625 PF00156 Phosphoribosyl transferase domain CCX85_RS03630 PF01425 Amidase CCX85_RS03635 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCX85_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS03645 PF03167 Uracil DNA glycosylase superfamily CCX85_RS03650 PF01979 Amidohydrolase family CCX85_RS03655 PF02660 CCX85_RS03655 CCX85_RS03660 PF00204 DNA gyrase B CCX85_RS03660 PF00986 DNA gyrase B subunit, carboxyl terminus CCX85_RS03660 PF01751 Toprim domain CCX85_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS03670 PF00521 DNA gyrase/topoisomerase IV, subunit A CCX85_RS03670 PF03989 DNA gyrase C-terminal domain, beta-propeller CCX85_RS03675 PF01063 Aminotransferase class IV CCX85_RS03680 PF11184 CCX85_RS03680 CCX85_RS03695 PF00575 S1 RNA binding domain CCX85_RS03710 PF00581 Rhodanese-like domain CCX85_RS03710 PF12368 CCX85_RS03710 CCX85_RS03720 PF00043 Glutathione S-transferase, C-terminal domain CCX85_RS03725 PF03595 Voltage-dependent anion channel CCX85_RS03730 PF11240 CCX85_RS03730 CCX85_RS03735 PF01715 IPP transferase CCX85_RS03740 PF01926 50S ribosome-binding GTPase CCX85_RS03740 PF13167 CCX85_RS03740 CCX85_RS03740 PF16360 CCX85_RS03740 CCX85_RS03750 PF00753 Metallo-beta-lactamase superfamily CCX85_RS03750 PF12706 Beta-lactamase superfamily domain CCX85_RS03755 PF00106 short chain dehydrogenase CCX85_RS03760 PF01368 DHH family CCX85_RS03760 PF02272 DHHA1 domain CCX85_RS03760 PF10141 CCX85_RS03760 CCX85_RS03765 PF00156 Phosphoribosyl transferase domain CCX85_RS03770 PF07261 Replication initiation and membrane attachment CCX85_RS03775 PF00633 Helix-hairpin-helix motif CCX85_RS03775 PF00730 HhH-GPD superfamily base excision DNA repair protein CCX85_RS03775 PF10576 Iron-sulfur binding domain of endonuclease III CCX85_RS03780 PF04816 Family of unknown function (DUF633) CCX85_RS03785 PF01784 NIF3 (NGG1p interacting factor 3) CCX85_RS03790 PF01266 FAD dependent oxidoreductase CCX85_RS03795 PF00483 Nucleotidyl transferase CCX85_RS03800 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CCX85_RS03805 PF16363 CCX85_RS03805 CCX85_RS03810 PF00293 NUDIX domain CCX85_RS03815 PF01594 CCX85_RS03815 CCX85_RS03820 PF13181 Tetratricopeptide repeat CCX85_RS03825 PF05670 CCX85_RS03825 CCX85_RS03825 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CCX85_RS03830 PF04392 ABC transporter substrate binding protein CCX85_RS03840 PF02653 CCX85_RS03840 CCX85_RS03845 PF00005 ABC transporter CCX85_RS03850 PF00753 Metallo-beta-lactamase superfamily CCX85_RS03850 PF07521 RNA-metabolising metallo-beta-lactamase CCX85_RS03855 PF00756 Putative esterase CCX85_RS03865 PF00005 ABC transporter CCX85_RS03865 PF12848 ABC transporter CCX85_RS03870 PF00676 Dehydrogenase E1 component CCX85_RS03875 PF02779 Transketolase, pyrimidine binding domain CCX85_RS03875 PF02780 Transketolase, C-terminal domain CCX85_RS03880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCX85_RS03880 PF00364 Biotin-requiring enzyme CCX85_RS03880 PF02817 e3 binding domain CCX85_RS03890 PF00364 Biotin-requiring enzyme CCX85_RS03890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCX85_RS03890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS03900 PF02278 Polysaccharide lyase family 8, super-sandwich domain CCX85_RS03900 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CCX85_RS03905 PF03099 Biotin/lipoate A/B protein ligase family CCX85_RS03905 PF10437 Bacterial lipoate protein ligase C-terminus CCX85_RS03910 PF07685 CobB/CobQ-like glutamine amidotransferase domain CCX85_RS03915 PF08245 Mur ligase middle domain CCX85_RS03915 PF08353 CCX85_RS03915 CCX85_RS03920 PF02457 DisA bacterial checkpoint controller nucleotide-binding CCX85_RS03925 PF07949 YbbR-like protein CCX85_RS03930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCX85_RS03930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCX85_RS03930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCX85_RS03930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCX85_RS03940 PF04055 Radical SAM superfamily CCX85_RS03940 PF06969 HemN C-terminal domain CCX85_RS03945 PF01643 Acyl-ACP thioesterase CCX85_RS03950 PF13242 HAD-hyrolase-like CCX85_RS03950 PF13344 Haloacid dehalogenase-like hydrolase CCX85_RS03955 PF07314 CCX85_RS03955 CCX85_RS03965 PF13395 HNH endonuclease CCX85_RS03965 PF16592 CCX85_RS03965 CCX85_RS03965 PF16593 CCX85_RS03965 CCX85_RS03965 PF16595 CCX85_RS03965 CCX85_RS03970 PF01867 CRISPR associated protein Cas1 CCX85_RS03975 PF09827 CRISPR associated protein Cas2 CCX85_RS03980 PF09711 CRISPR-associated protein (Cas_Csn2) CCX85_RS03990 PF00334 Nucleoside diphosphate kinase CCX85_RS03995 PF00009 Elongation factor Tu GTP binding domain CCX85_RS03995 PF00679 Elongation factor G C-terminus CCX85_RS03995 PF03144 Elongation factor Tu domain 2 CCX85_RS03995 PF06421 GTP-binding protein LepA C-terminus CCX85_RS03995 PF14492 Elongation Factor G, domain II CCX85_RS04000 PF00746 CCX85_RS04000 CCX85_RS04000 PF01391 Collagen triple helix repeat (20 copies) CCX85_RS04005 PF01641 SelR domain CCX85_RS04010 PF03601 CCX85_RS04010 CCX85_RS04015 PF03610 PTS system fructose IIA component CCX85_RS04020 PF03830 PTS system sorbose subfamily IIB component CCX85_RS04025 PF03609 CCX85_RS04025 CCX85_RS04030 PF03613 CCX85_RS04030 CCX85_RS04035 PF06580 CCX85_RS04035 CCX85_RS04040 PF00072 Response regulator receiver domain CCX85_RS04040 PF12833 Helix-turn-helix domain CCX85_RS04045 PF13343 Bacterial extracellular solute-binding protein CCX85_RS04050 PF00171 Aldehyde dehydrogenase family CCX85_RS04055 PF01541 GIY-YIG catalytic domain CCX85_RS04055 PF02151 UvrB/uvrC motif CCX85_RS04055 PF08459 UvrC Helix-hairpin-helix N-terminal CCX85_RS04060 PF00881 Nitroreductase family CCX85_RS04065 PF01546 Peptidase family M20/M25/M40 CCX85_RS04070 PF01926 50S ribosome-binding GTPase CCX85_RS04070 PF10396 GTP-binding protein TrmE N-terminus CCX85_RS04070 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CCX85_RS04075 PF00466 Ribosomal protein L10 CCX85_RS04080 PF00542 Ribosomal protein L7/L12 C-terminal domain CCX85_RS04080 PF16320 CCX85_RS04080 CCX85_RS04085 PF00768 D-alanyl-D-alanine carboxypeptidase CCX85_RS04085 PF07943 Penicillin-binding protein 5, C-terminal domain CCX85_RS04090 PF01522 Polysaccharide deacetylase CCX85_RS04095 PF08245 Mur ligase middle domain CCX85_RS04100 PF01227 GTP cyclohydrolase I CCX85_RS04105 PF00809 Pterin binding enzyme CCX85_RS04110 PF02152 Dihydroneopterin aldolase CCX85_RS04115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CCX85_RS04120 PF01565 FAD binding domain CCX85_RS04120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CCX85_RS04125 PF00005 ABC transporter CCX85_RS04125 PF08402 TOBE domain CCX85_RS04130 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS04140 PF13416 Bacterial extracellular solute-binding protein CCX85_RS04145 PF00072 Response regulator receiver domain CCX85_RS04150 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CCX85_RS04150 PF17203 CCX85_RS04150 CCX85_RS04155 PF03390 CCX85_RS04155 CCX85_RS04160 PF00390 Malic enzyme, N-terminal domain CCX85_RS04160 PF03949 Malic enzyme, NAD binding domain CCX85_RS04170 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CCX85_RS04175 PF00654 Voltage gated chloride channel CCX85_RS04180 PF13472 GDSL-like Lipase/Acylhydrolase family CCX85_RS04185 PF01594 CCX85_RS04185 CCX85_RS04190 PF04002 RadC-like JAB domain CCX85_RS04195 PF07722 Peptidase C26 CCX85_RS04200 PF02629 CoA binding domain CCX85_RS04200 PF06971 Putative DNA-binding protein N-terminus CCX85_RS04205 PF08866 Putative amino acid metabolism CCX85_RS04210 PF00266 Aminotransferase class-V CCX85_RS04215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CCX85_RS04215 PF14572 Phosphoribosyl synthetase-associated domain CCX85_RS04220 PF01928 CYTH domain CCX85_RS04225 PF04607 Region found in RelA / SpoT proteins CCX85_RS04230 PF01513 ATP-NAD kinase CCX85_RS04235 PF00849 RNA pseudouridylate synthase CCX85_RS04240 PF01515 Phosphate acetyl/butaryl transferase CCX85_RS04245 PF00106 short chain dehydrogenase CCX85_RS04255 PF00005 ABC transporter CCX85_RS04260 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS04260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CCX85_RS04265 PF00478 IMP dehydrogenase / GMP reductase domain CCX85_RS04275 PF00156 Phosphoribosyl transferase domain CCX85_RS04280 PF00860 Permease family CCX85_RS04285 PF02424 ApbE family CCX85_RS04290 PF01361 Tautomerase enzyme CCX85_RS04295 PF00265 Thymidine kinase CCX85_RS04300 PF00472 RF-1 domain CCX85_RS04300 PF03462 PCRF domain CCX85_RS04305 PF05175 Methyltransferase small domain CCX85_RS04310 PF01300 Telomere recombination CCX85_RS04320 PF00464 Serine hydroxymethyltransferase CCX85_RS04325 PF04245 CCX85_RS04325 CCX85_RS04330 PF13702 Lysozyme-like CCX85_RS04335 PF00005 ABC transporter CCX85_RS04335 PF00664 ABC transporter transmembrane region CCX85_RS04340 PF00005 ABC transporter CCX85_RS04340 PF00664 ABC transporter transmembrane region CCX85_RS04345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCX85_RS04345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS04350 PF00056 lactate/malate dehydrogenase, NAD binding domain CCX85_RS04350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CCX85_RS04355 PF00521 DNA gyrase/topoisomerase IV, subunit A CCX85_RS04355 PF03989 DNA gyrase C-terminal domain, beta-propeller CCX85_RS04360 PF04203 Sortase family CCX85_RS04365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCX85_RS04380 PF00781 Diacylglycerol kinase catalytic domain CCX85_RS04385 PF03006 CCX85_RS04385 CCX85_RS04390 PF08876 CCX85_RS04390 CCX85_RS04395 PF01926 50S ribosome-binding GTPase CCX85_RS04400 PF01351 Ribonuclease HII CCX85_RS04405 PF02481 DNA recombination-mediator protein A CCX85_RS04410 PF01131 DNA topoisomerase CCX85_RS04410 PF01396 CCX85_RS04410 CCX85_RS04410 PF01751 Toprim domain CCX85_RS04415 PF01134 Glucose inhibited division protein A CCX85_RS04420 PF00682 HMGL-like CCX85_RS04420 PF02436 Conserved carboxylase domain CCX85_RS04425 PF04277 CCX85_RS04425 CCX85_RS04430 PF00364 Biotin-requiring enzyme CCX85_RS04435 PF03977 CCX85_RS04435 CCX85_RS04440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CCX85_RS04445 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS04445 PF07729 FCD domain CCX85_RS04450 PF03600 Citrate transporter CCX85_RS04460 PF00364 Biotin-requiring enzyme CCX85_RS04465 PF03977 CCX85_RS04465 CCX85_RS04470 PF06857 CCX85_RS04470 CCX85_RS04475 PF03328 HpcH/HpaI aldolase/citrate lyase family CCX85_RS04480 PF04223 Citrate lyase, alpha subunit (CitF) CCX85_RS04485 PF03802 CCX85_RS04485 CCX85_RS04490 PF00682 HMGL-like CCX85_RS04490 PF02436 Conserved carboxylase domain CCX85_RS04495 PF08218 Citrate lyase ligase C-terminal domain CCX85_RS04505 PF00589 Phage integrase family CCX85_RS04505 PF13495 Phage integrase, N-terminal SAM-like domain CCX85_RS04510 PF00717 Peptidase S24-like CCX85_RS04510 PF01381 Helix-turn-helix CCX85_RS04515 PF00448 SRP54-type protein, GTPase domain CCX85_RS04515 PF02881 SRP54-type protein, helical bundle domain CCX85_RS04515 PF02978 Signal peptide binding domain CCX85_RS04520 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CCX85_RS04525 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS04525 PF07702 UTRA domain CCX85_RS04535 PF00117 Glutamine amidotransferase class-I CCX85_RS04535 PF00958 GMP synthase C terminal domain CCX85_RS04535 PF02540 NAD synthase CCX85_RS04540 PF02388 FemAB family CCX85_RS04545 PF00005 ABC transporter CCX85_RS04545 PF12848 ABC transporter CCX85_RS04550 PF07155 ECF-type riboflavin transporter, S component CCX85_RS04555 PF08543 Phosphomethylpyrimidine kinase CCX85_RS04560 PF00155 Aminotransferase class I and II CCX85_RS04560 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS04570 PF03477 ATP cone domain CCX85_RS04575 PF13091 PLD-like domain CCX85_RS04580 PF01268 Formate--tetrahydrofolate ligase CCX85_RS04585 PF03099 Biotin/lipoate A/B protein ligase family CCX85_RS04585 PF10437 Bacterial lipoate protein ligase C-terminus CCX85_RS04595 PF01661 Macro domain CCX85_RS04600 PF01597 Glycine cleavage H-protein CCX85_RS04605 PF00296 Luciferase-like monooxygenase CCX85_RS04610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCX85_RS04615 PF03099 Biotin/lipoate A/B protein ligase family CCX85_RS04620 PF04127 DNA / pantothenate metabolism flavoprotein CCX85_RS04625 PF02441 Flavoprotein CCX85_RS04630 PF12822 Protein of unknown function (DUF3816) CCX85_RS04635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCX85_RS04635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCX85_RS04635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCX85_RS04635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCX85_RS04640 PF02653 CCX85_RS04640 CCX85_RS04645 PF02653 CCX85_RS04645 CCX85_RS04650 PF00005 ABC transporter CCX85_RS04655 PF02608 Basic membrane protein CCX85_RS04660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCX85_RS04665 PF05175 Methyltransferase small domain CCX85_RS04670 PF00485 Phosphoribulokinase / Uridine kinase family CCX85_RS04675 PF01649 Ribosomal protein S20 CCX85_RS04680 PF00512 His Kinase A (phospho-acceptor) domain CCX85_RS04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS04685 PF00072 Response regulator receiver domain CCX85_RS04685 PF00486 Transcriptional regulatory protein, C terminal CCX85_RS04690 PF01433 Peptidase family M1 CCX85_RS04690 PF11838 ERAP1-like C-terminal domain CCX85_RS04700 PF01895 PhoU domain CCX85_RS04705 PF00005 ABC transporter CCX85_RS04710 PF00005 ABC transporter CCX85_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS04725 PF12849 PBP superfamily domain CCX85_RS04730 PF01189 NOL1/NOP2/sun family CCX85_RS04730 PF13636 pre-rRNA processing and ribosome biogenesis CCX85_RS04730 PF17125 CCX85_RS04730 CCX85_RS04730 PF17126 CCX85_RS04730 CCX85_RS04735 PF00459 Inositol monophosphatase family CCX85_RS04740 PF05256 Uncharacterised protein family (UPF0223) CCX85_RS04745 PF03960 ArsC family CCX85_RS04750 PF01687 Riboflavin kinase CCX85_RS04750 PF06574 FAD synthetase CCX85_RS04755 PF01509 TruB family pseudouridylate synthase (N terminal domain) CCX85_RS04755 PF16198 CCX85_RS04755 CCX85_RS04760 PF09903 CCX85_RS04760 CCX85_RS04765 PF06081 CCX85_RS04765 CCX85_RS04765 PF11728 DUF939 C-terminal domain CCX85_RS04775 PF02687 CCX85_RS04775 CCX85_RS04780 PF00005 ABC transporter CCX85_RS04785 PF00440 Bacterial regulatory proteins, tetR family CCX85_RS04790 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS04790 PF02080 TrkA-C domain CCX85_RS04795 PF03780 CCX85_RS04795 CCX85_RS04800 PF05532 CsbD-like CCX85_RS04805 PF03780 CCX85_RS04805 CCX85_RS04810 PF10031 CCX85_RS04810 CCX85_RS04820 PF04226 CCX85_RS04820 CCX85_RS04825 PF00580 UvrD/REP helicase N-terminal domain CCX85_RS04825 PF13361 UvrD-like helicase C-terminal domain CCX85_RS04830 PF01235 CCX85_RS04830 CCX85_RS04835 PF01545 Cation efflux family CCX85_RS04835 PF16916 CCX85_RS04835 CCX85_RS04840 PF07373 CCX85_RS04840 CCX85_RS04845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCX85_RS04850 PF00005 ABC transporter CCX85_RS04855 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS04860 PF03831 PhnA protein CCX85_RS04860 PF08274 PhnA Zinc-Ribbon CCX85_RS04865 PF01380 SIS domain CCX85_RS04865 PF13522 Glutamine amidotransferase domain CCX85_RS04870 PF00717 Peptidase S24-like CCX85_RS04870 PF10502 Signal peptidase, peptidase S26 CCX85_RS04875 PF00224 Pyruvate kinase, barrel domain CCX85_RS04875 PF02887 Pyruvate kinase, alpha/beta domain CCX85_RS04880 PF00365 Phosphofructokinase CCX85_RS04885 PF01336 OB-fold nucleic acid binding domain CCX85_RS04885 PF02811 PHP domain CCX85_RS04885 PF07733 Bacterial DNA polymerase III alpha subunit CCX85_RS04885 PF14579 Helix-hairpin-helix motif CCX85_RS04890 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS04895 PF00005 ABC transporter CCX85_RS04905 PF09335 CCX85_RS04905 CCX85_RS04920 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain CCX85_RS04925 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain CCX85_RS04930 PF03904 CCX85_RS04930 CCX85_RS04935 PF13274 CCX85_RS04935 CCX85_RS04940 PF05257 CHAP domain CCX85_RS04940 PF08460 Bacterial SH3 domain CCX85_RS04950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CCX85_RS04955 PF04531 CCX85_RS04955 CCX85_RS04970 PF07761 CCX85_RS04970 CCX85_RS04975 PF07902 CCX85_RS04975 CCX85_RS04980 PF07212 Hyaluronidase protein (HylP) CCX85_RS04985 PF06605 Prophage endopeptidase tail CCX85_RS04990 PF05709 Phage tail protein CCX85_RS04995 PF10145 CCX85_RS04995 CCX85_RS05005 PF12363 CCX85_RS05005 CCX85_RS05010 PF06199 CCX85_RS05010 CCX85_RS05020 PF04883 CCX85_RS05020 CCX85_RS05030 PF05135 Phage gp6-like head-tail connector protein CCX85_RS05035 PF12949 HeH/LEM domain CCX85_RS05040 PF03864 Phage major capsid protein E CCX85_RS05045 PF02924 Bacteriophage lambda head decoration protein D CCX85_RS05050 PF14265 CCX85_RS05050 CCX85_RS05060 PF04233 CCX85_RS05060 CCX85_RS05065 PF05133 Phage portal protein, SPP1 Gp6-like CCX85_RS05070 PF03237 Terminase-like family CCX85_RS05070 PF17289 CCX85_RS05070 CCX85_RS05080 PF04266 ASCH domain CCX85_RS05085 PF00583 Acetyltransferase (GNAT) family CCX85_RS05095 PF02195 ParB-like nuclease domain CCX85_RS05120 PF02384 N-6 DNA Methylase CCX85_RS05130 PF11753 CCX85_RS05130 CCX85_RS05145 PF08774 VRR-NUC domain CCX85_RS05150 PF03288 Poxvirus D5 protein-like CCX85_RS05155 PF08708 Primase C terminal 1 (PriCT-1) CCX85_RS05155 PF09250 Bifunctional DNA primase/polymerase, N-terminal CCX85_RS05160 PF05037 CCX85_RS05160 CCX85_RS05165 PF00271 Helicase conserved C-terminal domain CCX85_RS05165 PF04851 Type III restriction enzyme, res subunit CCX85_RS05170 PF13479 CCX85_RS05170 CCX85_RS05175 PF05565 CCX85_RS05175 CCX85_RS05180 PF01381 Helix-turn-helix CCX85_RS05190 PF13443 Cro/C1-type HTH DNA-binding domain CCX85_RS05205 PF10552 CCX85_RS05205 CCX85_RS05215 PF01381 Helix-turn-helix CCX85_RS05230 PF00717 Peptidase S24-like CCX85_RS05230 PF01381 Helix-turn-helix CCX85_RS05240 PF00589 Phage integrase family CCX85_RS05240 PF14657 CCX85_RS05240 CCX85_RS05240 PF14659 Phage integrase, N-terminal SAM-like domain CCX85_RS05245 PF12978 Domain of Unknown Function with PDB structure (DUF3862) CCX85_RS05250 PF00343 Carbohydrate phosphorylase CCX85_RS05255 PF02446 4-alpha-glucanotransferase CCX85_RS05260 PF00356 Bacterial regulatory proteins, lacI family CCX85_RS05260 PF13377 Periplasmic binding protein-like domain CCX85_RS05265 PF13416 Bacterial extracellular solute-binding protein CCX85_RS05270 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS05295 PF07859 alpha/beta hydrolase fold CCX85_RS05300 PF04914 DltD C-terminal region CCX85_RS05305 PF00550 Phosphopantetheine attachment site CCX85_RS05310 PF03062 CCX85_RS05310 CCX85_RS05315 PF00501 AMP-binding enzyme CCX85_RS05315 PF13193 AMP-binding enzyme C-terminal domain CCX85_RS05320 PF12459 CCX85_RS05320 CCX85_RS05325 PF00271 Helicase conserved C-terminal domain CCX85_RS05325 PF02151 UvrB/uvrC motif CCX85_RS05325 PF04851 Type III restriction enzyme, res subunit CCX85_RS05325 PF12344 Ultra-violet resistance protein B CCX85_RS05330 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCX85_RS05330 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS05335 PF00005 ABC transporter CCX85_RS05340 PF02378 Phosphotransferase system, EIIC CCX85_RS05345 PF11687 CCX85_RS05345 CCX85_RS05350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CCX85_RS05355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS05360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCX85_RS05360 PF00874 PRD domain CCX85_RS05360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS05360 PF05043 Mga helix-turn-helix domain CCX85_RS05360 PF08279 HTH domain CCX85_RS05365 PF05913 Bacterial protein of unknown function (DUF871) CCX85_RS05370 PF00232 Glycosyl hydrolase family 1 CCX85_RS05375 PF04973 CCX85_RS05375 CCX85_RS05385 PF01018 GTP1/OBG CCX85_RS05385 PF01926 50S ribosome-binding GTPase CCX85_RS05385 PF09269 Domain of unknown function (DUF1967) CCX85_RS05390 PF13253 CCX85_RS05390 CCX85_RS05400 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CCX85_RS05400 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CCX85_RS05405 PF07158 CCX85_RS05405 CCX85_RS05420 PF00849 RNA pseudouridylate synthase CCX85_RS05420 PF01479 S4 domain CCX85_RS05425 PF03061 Thioesterase superfamily CCX85_RS05430 PF07690 Major Facilitator Superfamily CCX85_RS05435 PF08903 Domain of unknown function (DUF1846) CCX85_RS05440 PF03061 Thioesterase superfamily CCX85_RS05450 PF00239 Resolvase, N terminal domain CCX85_RS05450 PF07508 Recombinase CCX85_RS05450 PF13408 Recombinase zinc beta ribbon domain CCX85_RS05470 PF02687 CCX85_RS05470 CCX85_RS05475 PF00005 ABC transporter CCX85_RS05480 PF00589 Phage integrase family CCX85_RS05480 PF02920 DNA binding domain of tn916 integrase CCX85_RS05480 PF13102 Phage integrase SAM-like domain CCX85_RS05485 PF09035 Excisionase from transposon Tn916 CCX85_RS05495 PF12645 CCX85_RS05495 CCX85_RS05500 PF08281 Sigma-70, region 4 CCX85_RS05505 PF01381 Helix-turn-helix CCX85_RS05510 PF07690 Major Facilitator Superfamily CCX85_RS05515 PF14205 CCX85_RS05515 CCX85_RS05520 PF00009 Elongation factor Tu GTP binding domain CCX85_RS05520 PF00679 Elongation factor G C-terminus CCX85_RS05520 PF03764 Elongation factor G, domain IV CCX85_RS05520 PF14492 Elongation Factor G, domain II CCX85_RS05525 PF08076 CCX85_RS05525 CCX85_RS05530 PF12642 Conjugative transposon protein TcpC CCX85_RS05535 PF00877 NlpC/P60 family CCX85_RS05535 PF13702 Lysozyme-like CCX85_RS05545 PF12846 AAA-like domain CCX85_RS05550 PF12648 CCX85_RS05550 CCX85_RS05555 PF07275 Antirestriction protein (ArdA) CCX85_RS05565 PF01381 Helix-turn-helix CCX85_RS05565 PF02486 CCX85_RS05565 CCX85_RS05575 PF01580 FtsK/SpoIIIE family CCX85_RS05580 PF06125 Bacterial protein of unknown function (DUF961) CCX85_RS05585 PF06125 Bacterial protein of unknown function (DUF961) CCX85_RS05600 PF00512 His Kinase A (phospho-acceptor) domain CCX85_RS05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS05605 PF00072 Response regulator receiver domain CCX85_RS05605 PF00486 Transcriptional regulatory protein, C terminal CCX85_RS05610 PF01381 Helix-turn-helix CCX85_RS05615 PF05713 CCX85_RS05615 CCX85_RS05625 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CCX85_RS05625 PF01348 CCX85_RS05625 CCX85_RS05630 PF03432 CCX85_RS05630 CCX85_RS05640 PF00271 Helicase conserved C-terminal domain CCX85_RS05640 PF04851 Type III restriction enzyme, res subunit CCX85_RS05645 PF04326 Divergent AAA domain CCX85_RS05645 PF13749 ATP-dependent DNA helicase recG C-terminal CCX85_RS05650 PF01131 DNA topoisomerase CCX85_RS05650 PF01751 Toprim domain CCX85_RS05655 PF14283 CCX85_RS05655 CCX85_RS05670 PF12846 AAA-like domain CCX85_RS05675 PF12666 CCX85_RS05675 CCX85_RS05690 PF12750 CCX85_RS05690 CCX85_RS05710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CCX85_RS05720 PF02534 Type IV secretory system Conjugative DNA transfer CCX85_RS05725 PF12687 CCX85_RS05725 CCX85_RS05730 PF01695 IstB-like ATP binding protein CCX85_RS05735 PF06970 Replication initiator protein A (RepA) N-terminus CCX85_RS05745 PF05958 tRNA (Uracil-5-)-methyltransferase CCX85_RS05750 PF03816 Cell envelope-related transcriptional attenuator domain CCX85_RS05755 PF01202 Shikimate kinase CCX85_RS05760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCX85_RS05765 PF03631 CCX85_RS05765 CCX85_RS05770 PF00557 Metallopeptidase family M24 CCX85_RS05775 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS05775 PF00571 CBS domain CCX85_RS05775 PF03061 Thioesterase superfamily CCX85_RS05775 PF07085 DRTGG domain CCX85_RS05780 PF13302 Acetyltransferase (GNAT) domain CCX85_RS05785 PF00746 CCX85_RS05785 CCX85_RS05790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCX85_RS05795 PF00438 S-adenosylmethionine synthetase, N-terminal domain CCX85_RS05795 PF02772 S-adenosylmethionine synthetase, central domain CCX85_RS05795 PF02773 S-adenosylmethionine synthetase, C-terminal domain CCX85_RS05800 PF04270 Streptococcal histidine triad protein CCX85_RS05805 PF02237 Biotin protein ligase C terminal domain CCX85_RS05805 PF03099 Biotin/lipoate A/B protein ligase family CCX85_RS05805 PF08279 HTH domain CCX85_RS05810 PF11676 CCX85_RS05810 CCX85_RS05815 PF12169 DNA polymerase III subunits gamma and tau domain III CCX85_RS05815 PF13177 DNA polymerase III, delta subunit CCX85_RS05820 PF13185 GAF domain CCX85_RS05825 PF13367 CCX85_RS05825 CCX85_RS05830 PF06961 CCX85_RS05830 CCX85_RS05835 PF00485 Phosphoribulokinase / Uridine kinase family CCX85_RS05840 PF00270 DEAD/DEAH box helicase CCX85_RS05840 PF00271 Helicase conserved C-terminal domain CCX85_RS05845 PF01522 Polysaccharide deacetylase CCX85_RS05850 PF00171 Aldehyde dehydrogenase family CCX85_RS05855 PF00391 PEP-utilising enzyme, mobile domain CCX85_RS05855 PF02896 PEP-utilising enzyme, TIM barrel domain CCX85_RS05855 PF05524 PEP-utilising enzyme, N-terminal CCX85_RS05860 PF00381 PTS HPr component phosphorylation site CCX85_RS05865 PF00462 Glutaredoxin CCX85_RS05870 PF00317 Ribonucleotide reductase, all-alpha domain CCX85_RS05870 PF02867 Ribonucleotide reductase, barrel domain CCX85_RS05870 PF08343 Ribonucleotide reductase N-terminal CCX85_RS05875 PF00268 Ribonucleotide reductase, small chain CCX85_RS05880 PF00654 Voltage gated chloride channel CCX85_RS05895 PF02517 CAAX protease self-immunity CCX85_RS05900 PF11368 CCX85_RS05900 CCX85_RS05905 PF01381 Helix-turn-helix CCX85_RS05910 PF01411 tRNA synthetases class II (A) CCX85_RS05910 PF02272 DHHA1 domain CCX85_RS05910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCX85_RS05915 PF13145 PPIC-type PPIASE domain CCX85_RS05920 PF01596 O-methyltransferase CCX85_RS05925 PF07690 Major Facilitator Superfamily CCX85_RS05930 PF01432 Peptidase family M3 CCX85_RS05930 PF08439 Oligopeptidase F CCX85_RS05935 PF06054 CCX85_RS05935 CCX85_RS05940 PF00849 RNA pseudouridylate synthase CCX85_RS05940 PF01479 S4 domain CCX85_RS05945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CCX85_RS05950 PF02547 Queuosine biosynthesis protein CCX85_RS05955 PF11311 CCX85_RS05955 CCX85_RS05960 PF13354 Beta-lactamase enzyme family CCX85_RS05975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCX85_RS05975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCX85_RS05980 PF06144 DNA polymerase III, delta subunit CCX85_RS05985 PF00753 Metallo-beta-lactamase superfamily CCX85_RS05985 PF03772 CCX85_RS05985 CCX85_RS05985 PF13567 CCX85_RS05985 CCX85_RS05990 PF10531 SLBB domain CCX85_RS05990 PF12836 Helix-hairpin-helix motif CCX85_RS05995 PF01553 Acyltransferase CCX85_RS06000 PF05175 Methyltransferase small domain CCX85_RS06005 PF01541 GIY-YIG catalytic domain CCX85_RS06010 PF02705 CCX85_RS06010 CCX85_RS06015 PF00270 DEAD/DEAH box helicase CCX85_RS06015 PF00271 Helicase conserved C-terminal domain CCX85_RS06020 PF00009 Elongation factor Tu GTP binding domain CCX85_RS06020 PF03144 Elongation factor Tu domain 2 CCX85_RS06020 PF16658 CCX85_RS06020 CCX85_RS06030 PF09529 CCX85_RS06030 CCX85_RS06035 PF01225 Mur ligase family, catalytic domain CCX85_RS06035 PF02875 Mur ligase family, glutamate ligase domain CCX85_RS06035 PF08245 Mur ligase middle domain CCX85_RS06040 PF01820 D-ala D-ala ligase N-terminus CCX85_RS06040 PF07478 D-ala D-ala ligase C-terminus CCX85_RS06045 PF02132 RecR protein CCX85_RS06045 PF13662 Toprim domain CCX85_RS06055 PF01226 Formate/nitrite transporter CCX85_RS06065 PF02829 3H domain CCX85_RS06065 PF08279 HTH domain CCX85_RS06070 PF00300 Histidine phosphatase superfamily (branch 1) CCX85_RS06075 PF01180 Dihydroorotate dehydrogenase CCX85_RS06080 PF00122 E1-E2 ATPase CCX85_RS06080 PF00702 haloacid dehalogenase-like hydrolase CCX85_RS06085 PF00216 Bacterial DNA-binding protein CCX85_RS06090 PF09911 CCX85_RS06090 CCX85_RS06095 PF13472 GDSL-like Lipase/Acylhydrolase family CCX85_RS06100 PF02645 Uncharacterised protein, DegV family COG1307 CCX85_RS06110 PF02463 RecF/RecN/SMC N terminal domain CCX85_RS06115 PF01316 Arginine repressor, DNA binding domain CCX85_RS06115 PF02863 Arginine repressor, C-terminal domain CCX85_RS06120 PF01479 S4 domain CCX85_RS06120 PF01728 FtsJ-like methyltransferase CCX85_RS06125 PF00348 Polyprenyl synthetase CCX85_RS06130 PF02609 Exonuclease VII small subunit CCX85_RS06135 PF02601 CCX85_RS06135 CCX85_RS06135 PF13742 CCX85_RS06135 CCX85_RS06140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CCX85_RS06140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CCX85_RS06145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCX85_RS06145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCX85_RS06145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCX85_RS06145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCX85_RS06150 PF00875 DNA photolyase CCX85_RS06150 PF03441 FAD binding domain of DNA photolyase CCX85_RS06155 PF00005 ABC transporter CCX85_RS06160 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS06165 PF08796 Protein of unknown function (DUF1797) CCX85_RS06170 PF00004 ATPase family associated with various cellular activities (AAA) CCX85_RS06170 PF02151 UvrB/uvrC motif CCX85_RS06170 PF07724 AAA domain (Cdc48 subfamily) CCX85_RS06170 PF10431 C-terminal, D2-small domain, of ClpB protein CCX85_RS06175 PF00293 NUDIX domain CCX85_RS06180 PF08860 Domain of unknown function (DUF1827) CCX85_RS06185 PF00133 tRNA synthetases class I (I, L, M and V) CCX85_RS06185 PF08264 Anticodon-binding domain of tRNA CCX85_RS06190 PF05103 DivIVA protein CCX85_RS06195 PF01479 S4 domain CCX85_RS06200 PF02325 CCX85_RS06200 CCX85_RS06205 PF04472 Protein of unknown function (DUF552) CCX85_RS06210 PF01168 Alanine racemase, N-terminal domain CCX85_RS06215 PF00091 Tubulin/FtsZ family, GTPase domain CCX85_RS06215 PF12327 FtsZ family, C-terminal domain CCX85_RS06220 PF02491 SHS2 domain inserted in FTSA CCX85_RS06220 PF11983 CCX85_RS06220 CCX85_RS06220 PF14450 Cell division protein FtsA CCX85_RS06225 PF08478 POTRA domain, FtsQ-type CCX85_RS06230 PF03033 Glycosyltransferase family 28 N-terminal domain CCX85_RS06230 PF04101 Glycosyltransferase family 28 C-terminal domain CCX85_RS06235 PF02875 Mur ligase family, glutamate ligase domain CCX85_RS06235 PF08245 Mur ligase middle domain CCX85_RS06240 PF11364 CCX85_RS06240 CCX85_RS06245 PF00009 Elongation factor Tu GTP binding domain CCX85_RS06245 PF00679 Elongation factor G C-terminus CCX85_RS06245 PF03144 Elongation factor Tu domain 2 CCX85_RS06250 PF00581 Rhodanese-like domain CCX85_RS06255 PF00480 ROK family CCX85_RS06260 PF06014 Bacterial protein of unknown function (DUF910) CCX85_RS06265 PF00210 Ferritin-like domain CCX85_RS06275 PF04055 Radical SAM superfamily CCX85_RS06275 PF13394 4Fe-4S single cluster domain CCX85_RS06280 PF06265 Protein of unknown function (DUF1027) CCX85_RS06285 PF00356 Bacterial regulatory proteins, lacI family CCX85_RS06285 PF13377 Periplasmic binding protein-like domain CCX85_RS06290 PF05362 Lon protease (S16) C-terminal proteolytic domain CCX85_RS06290 PF13180 PDZ domain CCX85_RS06295 PF01467 Cytidylyltransferase CCX85_RS06300 PF03602 Conserved hypothetical protein 95 CCX85_RS06305 PF03590 Aspartate-ammonia ligase CCX85_RS06310 PF00696 Amino acid kinase family CCX85_RS06315 PF01546 Peptidase family M20/M25/M40 CCX85_RS06320 PF03606 CCX85_RS06320 CCX85_RS06325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCX85_RS06325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCX85_RS06330 PF13673 Acetyltransferase (GNAT) domain CCX85_RS06335 PF02274 Amidinotransferase CCX85_RS06340 PF00027 Cyclic nucleotide-binding domain CCX85_RS06340 PF13545 Crp-like helix-turn-helix domain CCX85_RS06345 PF01316 Arginine repressor, DNA binding domain CCX85_RS06345 PF02863 Arginine repressor, C-terminal domain CCX85_RS06350 PF03483 B3/4 domain CCX85_RS06355 PF04237 YjbR CCX85_RS06360 PF00672 HAMP domain CCX85_RS06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS06360 PF02743 Cache domain CCX85_RS06360 PF06580 CCX85_RS06360 CCX85_RS06365 PF00072 Response regulator receiver domain CCX85_RS06365 PF12833 Helix-turn-helix domain CCX85_RS06370 PF01625 Peptide methionine sulfoxide reductase CCX85_RS06370 PF01641 SelR domain CCX85_RS06375 PF00578 AhpC/TSA family CCX85_RS06380 PF02683 CCX85_RS06380 CCX85_RS06385 PF01544 CorA-like Mg2+ transporter protein CCX85_RS06390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCX85_RS06405 PF00133 tRNA synthetases class I (I, L, M and V) CCX85_RS06405 PF08264 Anticodon-binding domain of tRNA CCX85_RS06405 PF10458 Valyl tRNA synthetase tRNA binding arm CCX85_RS06410 PF13238 AAA domain CCX85_RS06425 PF14520 Helix-hairpin-helix domain CCX85_RS06430 PF08930 Domain of unknown function (DUF1912) CCX85_RS06435 PF13936 Helix-turn-helix domain CCX85_RS06445 PF00793 DAHP synthetase I family CCX85_RS06450 PF01761 3-dehydroquinate synthase CCX85_RS06455 PF07883 Cupin domain CCX85_RS06460 PF07883 Cupin domain CCX85_RS06465 PF13649 Methyltransferase domain CCX85_RS06470 PF08501 Shikimate dehydrogenase substrate binding domain CCX85_RS06475 PF00703 Glycosyl hydrolases family 2 CCX85_RS06475 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CCX85_RS06475 PF02837 Glycosyl hydrolases family 2, sugar binding domain CCX85_RS06475 PF16355 CCX85_RS06475 CCX85_RS06480 PF00072 Response regulator receiver domain CCX85_RS06480 PF12833 Helix-turn-helix domain CCX85_RS06485 PF06580 CCX85_RS06485 CCX85_RS06490 PF04854 CCX85_RS06490 CCX85_RS06495 PF12010 CCX85_RS06495 CCX85_RS06495 PF13416 Bacterial extracellular solute-binding protein CCX85_RS06500 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS06505 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS06510 PF00480 ROK family CCX85_RS06515 PF00232 Glycosyl hydrolase family 1 CCX85_RS06520 PF07555 beta-N-acetylglucosaminidase CCX85_RS06525 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS06525 PF13377 Periplasmic binding protein-like domain CCX85_RS06530 PF06824 Protein of unknown function (DUF1237) CCX85_RS06535 PF01074 Glycosyl hydrolases family 38 N-terminal domain CCX85_RS06535 PF07748 Glycosyl hydrolases family 38 C-terminal domain CCX85_RS06535 PF09261 Alpha mannosidase, middle domain CCX85_RS06540 PF14501 GHKL domain CCX85_RS06545 PF01938 TRAM domain CCX85_RS06545 PF05958 tRNA (Uracil-5-)-methyltransferase CCX85_RS06550 PF02631 RecX family CCX85_RS06555 PF04167 Protein of unknown function (DUF402) CCX85_RS06635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CCX85_RS06635 PF16321 CCX85_RS06635 CCX85_RS06645 PF00270 DEAD/DEAH box helicase CCX85_RS06645 PF00271 Helicase conserved C-terminal domain CCX85_RS06650 PF01205 Uncharacterized protein family UPF0029 CCX85_RS06650 PF09186 Domain of unknown function (DUF1949) CCX85_RS06655 PF00291 Pyridoxal-phosphate dependent enzyme CCX85_RS06660 PF00575 S1 RNA binding domain CCX85_RS06665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCX85_RS06665 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS06670 PF00072 Response regulator receiver domain CCX85_RS06670 PF00196 Bacterial regulatory proteins, luxR family CCX85_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS06675 PF07730 Histidine kinase CCX85_RS06680 PF09922 Cell wall-active antibiotics response protein (DUF2154) CCX85_RS06685 PF00069 Protein kinase domain CCX85_RS06685 PF03793 PASTA domain CCX85_RS06690 PF13672 Protein phosphatase 2C CCX85_RS06695 PF01029 NusB family CCX85_RS06695 PF01189 NOL1/NOP2/sun family CCX85_RS06700 PF00551 Formyl transferase CCX85_RS06700 PF02911 Formyl transferase, C-terminal domain CCX85_RS06705 PF00271 Helicase conserved C-terminal domain CCX85_RS06705 PF04851 Type III restriction enzyme, res subunit CCX85_RS06710 PF01192 RNA polymerase Rpb6 CCX85_RS06715 PF00625 Guanylate kinase CCX85_RS06720 PF00013 KH domain CCX85_RS06720 PF01966 HD domain CCX85_RS06720 PF12072 CCX85_RS06720 CCX85_RS06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCX85_RS06725 PF03466 LysR substrate binding domain CCX85_RS06730 PF00108 Thiolase, N-terminal domain CCX85_RS06730 PF02803 Thiolase, C-terminal domain CCX85_RS06735 PF01144 Coenzyme A transferase CCX85_RS06740 PF01144 Coenzyme A transferase CCX85_RS06745 PF13561 Enoyl-(Acyl carrier protein) reductase CCX85_RS06750 PF02447 CCX85_RS06750 CCX85_RS06755 PF02664 S-Ribosylhomocysteinase (LuxS) CCX85_RS06765 PF01170 Putative RNA methylase family UPF0020 CCX85_RS06765 PF02926 THUMP domain CCX85_RS06775 PF05103 DivIVA protein CCX85_RS06780 PF06908 Protein of unknown function (DUF1273) CCX85_RS06785 PF03838 Recombination protein U CCX85_RS06790 PF00905 Penicillin binding protein transpeptidase domain CCX85_RS06790 PF00912 Transglycosylase CCX85_RS06795 PF03051 Peptidase C1-like family CCX85_RS06800 PF02540 NAD synthase CCX85_RS06805 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CCX85_RS06810 PF00324 Amino acid permease CCX85_RS06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS06820 PF13268 CCX85_RS06820 CCX85_RS06825 PF00005 ABC transporter CCX85_RS06830 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS06835 PF00270 DEAD/DEAH box helicase CCX85_RS06835 PF00271 Helicase conserved C-terminal domain CCX85_RS06840 PF00953 Glycosyl transferase family 4 CCX85_RS06840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CCX85_RS06845 PF00905 Penicillin binding protein transpeptidase domain CCX85_RS06845 PF03717 Penicillin-binding Protein dimerisation domain CCX85_RS06845 PF03793 PASTA domain CCX85_RS06850 PF04977 Septum formation initiator CCX85_RS06855 PF01795 MraW methylase family CCX85_RS06865 PF00171 Aldehyde dehydrogenase family CCX85_RS06870 PF00696 Amino acid kinase family CCX85_RS06880 PF00005 ABC transporter CCX85_RS06885 PF08951 Enterocin A Immunity CCX85_RS06890 PF00456 Transketolase, thiamine diphosphate binding domain CCX85_RS06890 PF02779 Transketolase, pyrimidine binding domain CCX85_RS06890 PF02780 Transketolase, C-terminal domain CCX85_RS06895 PF00923 Transaldolase CCX85_RS06900 PF05043 Mga helix-turn-helix domain CCX85_RS06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS06910 PF00230 Major intrinsic protein CCX85_RS06915 PF01266 FAD dependent oxidoreductase CCX85_RS06915 PF16901 CCX85_RS06915 CCX85_RS06920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CCX85_RS06920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CCX85_RS06925 PF03413 Peptidase propeptide and YPEB domain CCX85_RS06930 PF05979 Bacterial protein of unknown function (DUF896) CCX85_RS06935 PF02092 CCX85_RS06935 CCX85_RS06940 PF02091 Glycyl-tRNA synthetase alpha subunit CCX85_RS06950 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CCX85_RS06955 PF00248 Aldo/keto reductase family CCX85_RS06960 PF01979 Amidohydrolase family CCX85_RS06965 PF01895 PhoU domain CCX85_RS06965 PF02690 CCX85_RS06965 CCX85_RS06975 PF02645 Uncharacterised protein, DegV family COG1307 CCX85_RS06980 PF00440 Bacterial regulatory proteins, tetR family CCX85_RS06985 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS06990 PF03458 CCX85_RS06990 CCX85_RS06995 PF01791 DeoC/LacD family aldolase CCX85_RS07005 PF02502 Ribose/Galactose Isomerase CCX85_RS07010 PF02502 Ribose/Galactose Isomerase CCX85_RS07020 PF03611 CCX85_RS07020 CCX85_RS07025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS07030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCX85_RS07035 PF00455 CCX85_RS07035 CCX85_RS07035 PF08220 DeoR-like helix-turn-helix domain CCX85_RS07045 PF00403 Heavy-metal-associated domain CCX85_RS07050 PF00122 E1-E2 ATPase CCX85_RS07050 PF00403 Heavy-metal-associated domain CCX85_RS07050 PF00702 haloacid dehalogenase-like hydrolase CCX85_RS07055 PF03965 Penicillinase repressor CCX85_RS07060 PF07859 alpha/beta hydrolase fold CCX85_RS07065 PF02033 Ribosome-binding factor A CCX85_RS07070 PF00009 Elongation factor Tu GTP binding domain CCX85_RS07070 PF04760 Translation initiation factor IF-2, N-terminal region CCX85_RS07070 PF11987 Translation-initiation factor 2 CCX85_RS07075 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CCX85_RS07080 PF04296 Protein of unknown function (DUF448) CCX85_RS07085 PF08529 NusA N-terminal domain CCX85_RS07085 PF13184 NusA-like KH domain CCX85_RS07090 PF02576 Uncharacterised BCR, YhbC family COG0779 CCX85_RS07090 PF17384 CCX85_RS07090 CCX85_RS07100 PF02390 Putative methyltransferase CCX85_RS07105 PF01636 Phosphotransferase enzyme family CCX85_RS07110 PF05975 CCX85_RS07110 CCX85_RS07115 PF00005 ABC transporter CCX85_RS07120 PF01230 HIT domain CCX85_RS07130 PF03816 Cell envelope-related transcriptional attenuator domain CCX85_RS07135 PF00583 Acetyltransferase (GNAT) family CCX85_RS07140 PF02367 Uncharacterised P-loop hydrolase UPF0079 CCX85_RS07145 PF00860 Permease family CCX85_RS07150 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS07155 PF03610 PTS system fructose IIA component CCX85_RS07155 PF03830 PTS system sorbose subfamily IIB component CCX85_RS07160 PF03609 CCX85_RS07160 CCX85_RS07165 PF03613 CCX85_RS07165 CCX85_RS07170 PF06115 CCX85_RS07170 CCX85_RS07175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCX85_RS07175 PF02403 Seryl-tRNA synthetase N-terminal domain CCX85_RS07180 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCX85_RS07185 PF01039 Carboxyl transferase domain CCX85_RS07190 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CCX85_RS07190 PF02785 Biotin carboxylase C-terminal domain CCX85_RS07190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCX85_RS07195 PF07977 FabA-like domain CCX85_RS07200 PF00364 Biotin-requiring enzyme CCX85_RS07205 PF00109 Beta-ketoacyl synthase, N-terminal domain CCX85_RS07205 PF02801 Beta-ketoacyl synthase, C-terminal domain CCX85_RS07210 PF13561 Enoyl-(Acyl carrier protein) reductase CCX85_RS07215 PF00698 Acyl transferase domain CCX85_RS07220 PF03060 Nitronate monooxygenase CCX85_RS07225 PF00550 Phosphopantetheine attachment site CCX85_RS07230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCX85_RS07230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCX85_RS07235 PF01047 MarR family CCX85_RS07240 PF00378 Enoyl-CoA hydratase/isomerase family CCX85_RS07245 PF00226 DnaJ domain CCX85_RS07245 PF00684 DnaJ central domain CCX85_RS07245 PF01556 DnaJ C terminal domain CCX85_RS07250 PF00012 Hsp70 protein CCX85_RS07255 PF01025 GrpE CCX85_RS07260 PF01628 HrcA protein C terminal domain CCX85_RS07260 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CCX85_RS07265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CCX85_RS07270 PF02557 D-alanyl-D-alanine carboxypeptidase CCX85_RS07275 PF00300 Histidine phosphatase superfamily (branch 1) CCX85_RS07280 PF04226 CCX85_RS07280 CCX85_RS07290 PF02637 GatB domain CCX85_RS07290 PF02934 GatB/GatE catalytic domain CCX85_RS07295 PF01425 Amidase CCX85_RS07300 PF02686 Glu-tRNAGln amidotransferase C subunit CCX85_RS07305 PF02896 PEP-utilising enzyme, TIM barrel domain CCX85_RS07315 PF00857 Isochorismatase family CCX85_RS07320 PF06018 CodY GAF-like domain CCX85_RS07320 PF08222 CodY helix-turn-helix domain CCX85_RS07325 PF00155 Aminotransferase class I and II CCX85_RS07330 PF00582 Universal stress protein family CCX85_RS07335 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CCX85_RS07335 PF08282 haloacid dehalogenase-like hydrolase CCX85_RS07340 PF00710 Asparaginase CCX85_RS07350 PF00005 ABC transporter CCX85_RS07355 PF00270 DEAD/DEAH box helicase CCX85_RS07355 PF00271 Helicase conserved C-terminal domain CCX85_RS07355 PF17191 CCX85_RS07355 CCX85_RS07365 PF00005 ABC transporter CCX85_RS07370 PF02361 Cobalt transport protein CCX85_RS07375 PF09605 CCX85_RS07375 CCX85_RS07380 PF00005 ABC transporter CCX85_RS07380 PF00664 ABC transporter transmembrane region CCX85_RS07385 PF00005 ABC transporter CCX85_RS07385 PF00664 ABC transporter transmembrane region CCX85_RS07390 PF00005 ABC transporter CCX85_RS07395 PF01032 FecCD transport family CCX85_RS07400 PF01497 Periplasmic binding protein CCX85_RS07405 PF11545 Cell surface heme-binding protein Shp CCX85_RS07410 PF05031 Iron Transport-associated domain CCX85_RS07410 PF07550 CCX85_RS07410 CCX85_RS07410 PF13855 Leucine rich repeat CCX85_RS07415 PF05257 CHAP domain CCX85_RS07420 PF00842 Alanine racemase, C-terminal domain CCX85_RS07420 PF01168 Alanine racemase, N-terminal domain CCX85_RS07425 PF01648 4'-phosphopantetheinyl transferase superfamily CCX85_RS07430 PF01043 SecA preprotein cross-linking domain CCX85_RS07430 PF02810 SEC-C motif CCX85_RS07430 PF07516 SecA Wing and Scaffold domain CCX85_RS07430 PF07517 SecA DEAD-like domain CCX85_RS07435 PF01238 Phosphomannose isomerase type I CCX85_RS07440 PF00480 ROK family CCX85_RS07450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCX85_RS07450 PF00367 phosphotransferase system, EIIB CCX85_RS07450 PF02378 Phosphotransferase system, EIIC CCX85_RS07455 PF00251 Glycosyl hydrolases family 32 N-terminal domain CCX85_RS07455 PF08244 Glycosyl hydrolases family 32 C terminal CCX85_RS07460 PF00356 Bacterial regulatory proteins, lacI family CCX85_RS07460 PF13377 Periplasmic binding protein-like domain CCX85_RS07465 PF01029 NusB family CCX85_RS07470 PF03780 CCX85_RS07470 CCX85_RS07475 PF01132 Elongation factor P (EF-P) OB domain CCX85_RS07475 PF08207 Elongation factor P (EF-P) KOW-like domain CCX85_RS07475 PF09285 Elongation factor P, C-terminal CCX85_RS07480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCX85_RS07485 PF00557 Metallopeptidase family M24 CCX85_RS07485 PF01321 Creatinase/Prolidase N-terminal domain CCX85_RS07490 PF00005 ABC transporter CCX85_RS07495 PF01544 CorA-like Mg2+ transporter protein CCX85_RS07500 PF06570 CCX85_RS07500 CCX85_RS07505 PF01084 Ribosomal protein S18 CCX85_RS07510 PF00436 Single-strand binding protein family CCX85_RS07515 PF01250 Ribosomal protein S6 CCX85_RS07525 PF00633 Helix-hairpin-helix motif CCX85_RS07525 PF00730 HhH-GPD superfamily base excision DNA repair protein CCX85_RS07525 PF14815 NUDIX domain CCX85_RS07530 PF01381 Helix-turn-helix CCX85_RS07535 PF00085 Thioredoxin CCX85_RS07540 PF01569 PAP2 superfamily CCX85_RS07545 PF00488 MutS domain V CCX85_RS07545 PF01713 Smr domain CCX85_RS07550 PF02674 CCX85_RS07550 CCX85_RS07560 PF01351 Ribonuclease HII CCX85_RS07560 PF11858 Domain of unknown function (DUF3378) CCX85_RS07565 PF00717 Peptidase S24-like CCX85_RS07570 PF13538 UvrD-like helicase C-terminal domain CCX85_RS07570 PF13604 AAA domain CCX85_RS07570 PF14490 Helix-hairpin-helix containing domain CCX85_RS07580 PF00817 impB/mucB/samB family CCX85_RS07580 PF11798 IMS family HHH motif CCX85_RS07580 PF11799 impB/mucB/samB family C-terminal domain CCX85_RS07585 PF01228 Glycine radical CCX85_RS07585 PF02901 Pyruvate formate lyase CCX85_RS07595 PF00144 Beta-lactamase CCX85_RS07600 PF14506 CppA N-terminal CCX85_RS07600 PF14507 CppA C-terminal CCX85_RS07610 PF00230 Major intrinsic protein CCX85_RS07620 PF07690 Major Facilitator Superfamily CCX85_RS07625 PF13545 Crp-like helix-turn-helix domain CCX85_RS07630 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CCX85_RS07630 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CCX85_RS07630 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CCX85_RS07635 PF01381 Helix-turn-helix CCX85_RS07640 PF01381 Helix-turn-helix CCX85_RS07645 PF02575 YbaB/EbfC DNA-binding family CCX85_RS07650 PF13411 MerR HTH family regulatory protein CCX85_RS07655 PF00929 Exonuclease CCX85_RS07660 PF04394 CCX85_RS07660 CCX85_RS07660 PF08279 HTH domain CCX85_RS07665 PF03486 HI0933-like protein CCX85_RS07670 PF01791 DeoC/LacD family aldolase CCX85_RS07675 PF01773 Na+ dependent nucleoside transporter N-terminus CCX85_RS07675 PF07662 Na+ dependent nucleoside transporter C-terminus CCX85_RS07680 PF01048 Phosphorylase superfamily CCX85_RS07685 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS07690 PF00253 Ribosomal protein S14p/S29e CCX85_RS07695 PF00814 Glycoprotease family CCX85_RS07700 PF13508 Acetyltransferase (GNAT) domain CCX85_RS07705 PF00814 Glycoprotease family CCX85_RS07710 PF07288 Protein of unknown function (DUF1447) CCX85_RS07715 PF00753 Metallo-beta-lactamase superfamily CCX85_RS07715 PF07521 RNA-metabolising metallo-beta-lactamase CCX85_RS07720 PF00120 Glutamine synthetase, catalytic domain CCX85_RS07720 PF03951 Glutamine synthetase, beta-Grasp domain CCX85_RS07725 PF13411 MerR HTH family regulatory protein CCX85_RS07730 PF06081 CCX85_RS07730 CCX85_RS07735 PF00162 Phosphoglycerate kinase CCX85_RS07740 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CCX85_RS07745 PF01145 SPFH domain / Band 7 family CCX85_RS07750 PF02734 DAK2 domain CCX85_RS07750 PF13684 Dihydroxyacetone kinase family CCX85_RS07755 PF03780 CCX85_RS07755 CCX85_RS07760 PF00830 Ribosomal L28 family CCX85_RS07765 PF01116 Fructose-bisphosphate aldolase class-II CCX85_RS07775 PF12146 Putative lysophospholipase CCX85_RS07780 PF00117 Glutamine amidotransferase class-I CCX85_RS07780 PF06418 CTP synthase N-terminus CCX85_RS07790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCX85_RS07790 PF05697 Bacterial trigger factor protein (TF) CCX85_RS07790 PF05698 Bacterial trigger factor protein (TF) C-terminus CCX85_RS07795 PF00924 Mechanosensitive ion channel CCX85_RS07800 PF04260 Protein of unknown function (DUF436) CCX85_RS07805 PF07155 ECF-type riboflavin transporter, S component CCX85_RS07810 PF08543 Phosphomethylpyrimidine kinase CCX85_RS07815 PF01416 tRNA pseudouridine synthase CCX85_RS07855 PF02595 Glycerate kinase family CCX85_RS07860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CCX85_RS07860 PF04851 Type III restriction enzyme, res subunit CCX85_RS07860 PF12008 Type I restriction and modification enzyme - subunit R C terminal CCX85_RS07865 PF01420 Type I restriction modification DNA specificity domain CCX85_RS07870 PF02384 N-6 DNA Methylase CCX85_RS07870 PF12161 HsdM N-terminal domain CCX85_RS07880 PF00072 Response regulator receiver domain CCX85_RS07880 PF00196 Bacterial regulatory proteins, luxR family CCX85_RS07890 PF02687 CCX85_RS07890 CCX85_RS07895 PF00005 ABC transporter CCX85_RS07900 PF00005 ABC transporter CCX85_RS07900 PF00664 ABC transporter transmembrane region CCX85_RS07905 PF03412 Peptidase C39 family CCX85_RS07915 PF04604 Type-A lantibiotic CCX85_RS07920 PF00232 Glycosyl hydrolase family 1 CCX85_RS07925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS07925 PF02378 Phosphotransferase system, EIIC CCX85_RS07930 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CCX85_RS07935 PF01791 DeoC/LacD family aldolase CCX85_RS07940 PF00294 pfkB family carbohydrate kinase CCX85_RS07945 PF02502 Ribose/Galactose Isomerase CCX85_RS07950 PF02502 Ribose/Galactose Isomerase CCX85_RS07955 PF00455 CCX85_RS07955 CCX85_RS07955 PF08220 DeoR-like helix-turn-helix domain CCX85_RS07970 PF05016 Plasmid stabilisation system protein CCX85_RS07975 PF14659 Phage integrase, N-terminal SAM-like domain CCX85_RS07990 PF00380 Ribosomal protein S9/S16 CCX85_RS07995 PF00572 Ribosomal protein L13 CCX85_RS08000 PF01381 Helix-turn-helix CCX85_RS08010 PF02645 Uncharacterised protein, DegV family COG1307 CCX85_RS08015 PF05991 CCX85_RS08015 CCX85_RS08020 PF00588 SpoU rRNA Methylase family CCX85_RS08020 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCX85_RS08030 PF00636 Ribonuclease III domain CCX85_RS08035 PF01406 tRNA synthetases class I (C) catalytic domain CCX85_RS08035 PF09190 DALR domain CCX85_RS08050 PF00132 Bacterial transferase hexapeptide (six repeats) CCX85_RS08055 PF07179 CCX85_RS08055 CCX85_RS08060 PF00013 KH domain CCX85_RS08060 PF00575 S1 RNA binding domain CCX85_RS08060 PF01138 3' exoribonuclease family, domain 1 CCX85_RS08060 PF03725 3' exoribonuclease family, domain 2 CCX85_RS08060 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CCX85_RS08065 PF00923 Transaldolase CCX85_RS08070 PF03611 CCX85_RS08070 CCX85_RS08075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS08080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCX85_RS08080 PF00874 PRD domain CCX85_RS08085 PF00312 Ribosomal protein S15 CCX85_RS08100 PF01327 Polypeptide deformylase CCX85_RS08105 PF03358 NADPH-dependent FMN reductase CCX85_RS08110 PF01047 MarR family CCX85_RS08115 PF00929 Exonuclease CCX85_RS08115 PF02811 PHP domain CCX85_RS08115 PF07733 Bacterial DNA polymerase III alpha subunit CCX85_RS08115 PF11490 CCX85_RS08115 CCX85_RS08115 PF14480 CCX85_RS08115 CCX85_RS08115 PF14579 Helix-hairpin-helix motif CCX85_RS08120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCX85_RS08120 PF03129 Anticodon binding domain CCX85_RS08120 PF04073 Aminoacyl-tRNA editing domain CCX85_RS08125 PF02163 Peptidase family M50 CCX85_RS08125 PF13180 PDZ domain CCX85_RS08130 PF01148 Cytidylyltransferase family CCX85_RS08135 PF01255 Putative undecaprenyl diphosphate synthase CCX85_RS08140 PF02699 Preprotein translocase subunit CCX85_RS08145 PF00085 Thioredoxin CCX85_RS08150 PF00128 Alpha amylase, catalytic domain CCX85_RS08150 PF00746 CCX85_RS08150 CCX85_RS08150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CCX85_RS08150 PF03714 Bacterial pullanase-associated domain CCX85_RS08160 PF00128 Alpha amylase, catalytic domain CCX85_RS08160 PF11941 Domain of unknown function (DUF3459) CCX85_RS08165 PF00005 ABC transporter CCX85_RS08165 PF03459 TOBE domain CCX85_RS08170 PF13556 PucR C-terminal helix-turn-helix domain CCX85_RS08175 PF02821 Staphylokinase/Streptokinase family CCX85_RS08180 PF02580 D-Tyr-tRNA(Tyr) deacylase CCX85_RS08185 PF02824 TGS domain CCX85_RS08185 PF04607 Region found in RelA / SpoT proteins CCX85_RS08185 PF13291 ACT domain CCX85_RS08185 PF13328 HD domain CCX85_RS08190 PF00746 CCX85_RS08190 CCX85_RS08190 PF01391 Collagen triple helix repeat (20 copies) CCX85_RS08195 PF07972 NrdI Flavodoxin like CCX85_RS08200 PF03372 Endonuclease/Exonuclease/phosphatase family CCX85_RS08205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCX85_RS08205 PF00367 phosphotransferase system, EIIB CCX85_RS08205 PF02378 Phosphotransferase system, EIIC CCX85_RS08210 PF04452 RNA methyltransferase CCX85_RS08215 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CCX85_RS08220 PF11217 Protein of unknown function (DUF3013) CCX85_RS08225 PF00425 chorismate binding enzyme CCX85_RS08225 PF01063 Aminotransferase class IV CCX85_RS08230 PF00117 Glutamine amidotransferase class-I CCX85_RS08235 PF00004 ATPase family associated with various cellular activities (AAA) CCX85_RS08235 PF12002 MgsA AAA+ ATPase C terminal CCX85_RS08235 PF16193 CCX85_RS08235 CCX85_RS08250 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain CCX85_RS08250 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain CCX85_RS08260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCX85_RS08265 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component CCX85_RS08275 PF00005 ABC transporter CCX85_RS08280 PF00005 ABC transporter CCX85_RS08285 PF05532 CsbD-like CCX85_RS08290 PF04270 Streptococcal histidine triad protein CCX85_RS08295 PF01297 Periplasmic solute binding protein family CCX85_RS08300 PF04650 CCX85_RS08300 CCX85_RS08305 PF00082 Subtilase family CCX85_RS08305 PF02225 PA domain CCX85_RS08305 PF06280 Fn3-like domain (DUF1034) CCX85_RS08305 PF13585 C-terminal domain of CHU protein family CCX85_RS08310 PF00746 CCX85_RS08310 CCX85_RS08310 PF02370 M protein repeat CCX85_RS08310 PF04650 CCX85_RS08310 CCX85_RS08315 PF00746 CCX85_RS08315 CCX85_RS08315 PF04650 CCX85_RS08315 CCX85_RS08320 PF00746 CCX85_RS08320 CCX85_RS08320 PF04650 CCX85_RS08320 CCX85_RS08325 PF05043 Mga helix-turn-helix domain CCX85_RS08325 PF08270 CCX85_RS08325 CCX85_RS08325 PF08280 M protein trans-acting positive regulator (MGA) HTH domain CCX85_RS08340 PF05257 CHAP domain CCX85_RS08345 PF00512 His Kinase A (phospho-acceptor) domain CCX85_RS08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS08350 PF00072 Response regulator receiver domain CCX85_RS08350 PF00486 Transcriptional regulatory protein, C terminal CCX85_RS08355 PF02687 CCX85_RS08355 CCX85_RS08355 PF12704 MacB-like periplasmic core domain CCX85_RS08360 PF00005 ABC transporter CCX85_RS08365 PF16576 CCX85_RS08365 CCX85_RS08375 PF14131 Domain of unknown function (DUF4298) CCX85_RS08385 PF13145 PPIC-type PPIASE domain CCX85_RS08395 PF13734 Spi protease inhibitor CCX85_RS08400 PF01640 Peptidase C10 family CCX85_RS08400 PF13734 Spi protease inhibitor CCX85_RS08420 PF01223 DNA/RNA non-specific endonuclease CCX85_RS08425 PF04608 Phosphatidylglycerophosphatase A CCX85_RS08430 PF00465 Iron-containing alcohol dehydrogenase CCX85_RS08435 PF00923 Transaldolase CCX85_RS08440 PF01228 Glycine radical CCX85_RS08440 PF02901 Pyruvate formate lyase CCX85_RS08445 PF02378 Phosphotransferase system, EIIC CCX85_RS08450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCX85_RS08455 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CCX85_RS08460 PF04198 Putative sugar-binding domain CCX85_RS08465 PF00455 CCX85_RS08465 CCX85_RS08465 PF08220 DeoR-like helix-turn-helix domain CCX85_RS08470 PF04055 Radical SAM superfamily CCX85_RS08470 PF13353 4Fe-4S single cluster domain CCX85_RS08480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CCX85_RS08485 PF00471 Ribosomal protein L33 CCX85_RS08490 PF00905 Penicillin binding protein transpeptidase domain CCX85_RS08490 PF00912 Transglycosylase CCX85_RS08505 PF00849 RNA pseudouridylate synthase CCX85_RS08515 PF03577 CCX85_RS08515 CCX85_RS08530 PF00118 TCP-1/cpn60 chaperonin family CCX85_RS08535 PF00166 Chaperonin 10 Kd subunit CCX85_RS08540 PF00004 ATPase family associated with various cellular activities (AAA) CCX85_RS08540 PF02861 Clp amino terminal domain CCX85_RS08540 PF07724 AAA domain (Cdc48 subfamily) CCX85_RS08540 PF10431 C-terminal, D2-small domain, of ClpB protein CCX85_RS08545 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) CCX85_RS08550 PF00313 'Cold-shock' DNA-binding domain CCX85_RS08560 PF00578 AhpC/TSA family CCX85_RS08560 PF10417 C-terminal domain of 1-Cys peroxiredoxin CCX85_RS08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCX85_RS08565 PF13192 Thioredoxin domain CCX85_RS08570 PF01979 Amidohydrolase family CCX85_RS08575 PF01175 Urocanase CCX85_RS08575 PF17391 CCX85_RS08575 CCX85_RS08575 PF17392 CCX85_RS08575 CCX85_RS08580 PF02971 Formiminotransferase domain CCX85_RS08580 PF07837 Formiminotransferase domain, N-terminal subdomain CCX85_RS08585 PF04961 Formiminotransferase-cyclodeaminase CCX85_RS08590 PF01268 Formate--tetrahydrofolate ligase CCX85_RS08595 PF05962 HutD CCX85_RS08600 PF13520 Amino acid permease CCX85_RS08605 PF00221 Aromatic amino acid lyase CCX85_RS08610 PF00491 Arginase family CCX85_RS08615 PF03704 Bacterial transcriptional activator domain CCX85_RS08615 PF13191 AAA ATPase domain CCX85_RS08620 PF00318 Ribosomal protein S2 CCX85_RS08625 PF00889 Elongation factor TS CCX85_RS08630 PF01431 Peptidase family M13 CCX85_RS08630 PF05649 Peptidase family M13 CCX85_RS08635 PF00128 Alpha amylase, catalytic domain CCX85_RS08635 PF11941 Domain of unknown function (DUF3459) CCX85_RS08640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCX85_RS08640 PF00367 phosphotransferase system, EIIB CCX85_RS08640 PF02378 Phosphotransferase system, EIIC CCX85_RS08645 PF00392 Bacterial regulatory proteins, gntR family CCX85_RS08645 PF07702 UTRA domain CCX85_RS08655 PF01638 HxlR-like helix-turn-helix CCX85_RS08660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCX85_RS08665 PF03883 CCX85_RS08665 CCX85_RS08670 PF13353 4Fe-4S single cluster domain CCX85_RS08675 PF13302 Acetyltransferase (GNAT) domain CCX85_RS08680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCX85_RS08685 PF03477 ATP cone domain CCX85_RS08685 PF13597 Anaerobic ribonucleoside-triphosphate reductase CCX85_RS08695 PF06949 CCX85_RS08695 CCX85_RS08700 PF03652 Uncharacterised protein family (UPF0081) CCX85_RS08705 PF06135 CCX85_RS08705 CCX85_RS08710 PF03960 ArsC family CCX85_RS08715 PF00154 recA bacterial DNA recombination protein CCX85_RS08720 PF00994 Probable molybdopterin binding domain CCX85_RS08720 PF02464 Competence-damaged protein CCX85_RS08725 PF03352 Methyladenine glycosylase CCX85_RS08730 PF01330 RuvA N terminal domain CCX85_RS08730 PF07499 RuvA, C-terminal domain CCX85_RS08730 PF14520 Helix-hairpin-helix domain CCX85_RS08735 PF07690 Major Facilitator Superfamily CCX85_RS08740 PF01119 DNA mismatch repair protein, C-terminal domain CCX85_RS08740 PF08676 MutL C terminal dimerisation domain CCX85_RS08740 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCX85_RS08745 PF00488 MutS domain V CCX85_RS08745 PF01624 MutS domain I CCX85_RS08745 PF05188 MutS domain II CCX85_RS08745 PF05190 MutS family domain IV CCX85_RS08745 PF05192 MutS domain III CCX85_RS08755 PF01316 Arginine repressor, DNA binding domain CCX85_RS08755 PF02863 Arginine repressor, C-terminal domain CCX85_RS08760 PF00750 tRNA synthetases class I (R) CCX85_RS08760 PF03485 Arginyl tRNA synthetase N terminal domain CCX85_RS08760 PF05746 DALR anticodon binding domain CCX85_RS08765 PF08951 Enterocin A Immunity CCX85_RS08770 PF02588 CCX85_RS08770 CCX85_RS08770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CCX85_RS08775 PF02588 CCX85_RS08775 CCX85_RS08775 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CCX85_RS08780 PF02588 CCX85_RS08780 CCX85_RS08780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CCX85_RS08785 PF00152 tRNA synthetases class II (D, K and N) CCX85_RS08785 PF01336 OB-fold nucleic acid binding domain CCX85_RS08785 PF02938 GAD domain CCX85_RS08790 PF03129 Anticodon binding domain CCX85_RS08790 PF13393 Histidyl-tRNA synthetase CCX85_RS08795 PF01783 Ribosomal L32p protein family CCX85_RS08800 PF00471 Ribosomal protein L33 CCX85_RS08810 PF03596 CCX85_RS08810 CCX85_RS08815 PF01022 Bacterial regulatory protein, arsR family CCX85_RS08825 PF00005 ABC transporter CCX85_RS08840 PF04018 CCX85_RS08840 CCX85_RS08845 PF00293 NUDIX domain CCX85_RS08850 PF03551 Transcriptional regulator PadR-like family CCX85_RS08855 PF08006 CCX85_RS08855 CCX85_RS08860 PF13349 CCX85_RS08860 CCX85_RS08865 PF12051 CCX85_RS08865 CCX85_RS08870 PF00440 Bacterial regulatory proteins, tetR family CCX85_RS08875 PF00163 Ribosomal protein S4/S9 N-terminal domain CCX85_RS08875 PF01479 S4 domain CCX85_RS08880 PF06257 Protein of unknown function (DUF1021) CCX85_RS08885 PF00772 DnaB-like helicase N terminal domain CCX85_RS08885 PF03796 DnaB-like helicase C terminal domain CCX85_RS08890 PF01281 Ribosomal protein L9, N-terminal domain CCX85_RS08890 PF03948 Ribosomal protein L9, C-terminal domain CCX85_RS08895 PF01368 DHH family CCX85_RS08895 PF02272 DHHA1 domain CCX85_RS08900 PF01134 Glucose inhibited division protein A CCX85_RS08900 PF13932 GidA associated domain 3 CCX85_RS08910 PF03054 tRNA methyl transferase CCX85_RS08915 PF01842 ACT domain CCX85_RS08915 PF03315 Serine dehydratase beta chain CCX85_RS08920 PF03313 CCX85_RS08920 CCX85_RS08925 PF01464 Transglycosylase SLT domain CCX85_RS08930 PF02361 Cobalt transport protein CCX85_RS08935 PF00005 ABC transporter CCX85_RS08940 PF00005 ABC transporter CCX85_RS08945 PF01066 CDP-alcohol phosphatidyltransferase CCX85_RS08950 PF13413 Helix-turn-helix domain CCX85_RS08955 PF00675 Insulinase (Peptidase family M16) CCX85_RS08955 PF05193 Peptidase M16 inactive domain CCX85_RS08960 PF05193 Peptidase M16 inactive domain CCX85_RS08965 PF00535 Glycosyl transferase family 2 CCX85_RS08970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCX85_RS08970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCX85_RS08970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCX85_RS08980 PF00483 Nucleotidyl transferase CCX85_RS08985 PF13275 S4 domain CCX85_RS08990 PF02463 RecF/RecN/SMC N terminal domain CCX85_RS08995 PF06800 CCX85_RS08995 CCX85_RS09000 PF00478 IMP dehydrogenase / GMP reductase domain CCX85_RS09000 PF00571 CBS domain CCX85_RS09005 PF00579 tRNA synthetases class I (W and Y) CCX85_RS09010 PF02588 CCX85_RS09010 CCX85_RS09010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CCX85_RS09015 PF00005 ABC transporter CCX85_RS09015 PF12848 ABC transporter CCX85_RS09020 PF09586 CCX85_RS09020 CCX85_RS09035 PF00665 Integrase core domain CCX85_RS09035 PF13936 Helix-turn-helix domain CCX85_RS09045 PF02590 Predicted SPOUT methyltransferase CCX85_RS09050 PF13180 PDZ domain CCX85_RS09050 PF13365 Trypsin-like peptidase domain CCX85_RS09055 PF02195 ParB-like nuclease domain