locus-tag class description SPYKS030_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SPYKS030_RS00005 PF00308 Bacterial dnaA protein SPYKS030_RS00010 PF02767 DNA polymerase III beta subunit, central domain SPYKS030_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SPYKS030_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SPYKS030_RS00020 PF01926 50S ribosome-binding GTPase SPYKS030_RS00020 PF06071 Protein of unknown function (DUF933) SPYKS030_RS00025 PF01195 Peptidyl-tRNA hydrolase SPYKS030_RS00030 PF03461 TRCF domain SPYKS030_RS00030 PF02559 CarD-like/TRCF domain SPYKS030_RS00030 PF00271 Helicase conserved C-terminal domain SPYKS030_RS00030 PF00270 DEAD/DEAH box helicase SPYKS030_RS00030 PF17757 UvrB interaction domain SPYKS030_RS00035 PF01479 S4 domain SPYKS030_RS00050 PF01171 PP-loop family SPYKS030_RS00055 PF00156 Phosphoribosyl transferase domain SPYKS030_RS00060 PF06480 FtsH Extracellular SPYKS030_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) SPYKS030_RS00060 PF01434 Peptidase family M41 SPYKS030_RS00060 PF17862 AAA+ lid domain SPYKS030_RS00065 PF13520 Amino acid permease SPYKS030_RS00245 PF05257 CHAP domain SPYKS030_RS00245 PF01476 LysM domain SPYKS030_RS00250 PF14572 Phosphoribosyl synthetase-associated domain SPYKS030_RS00250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPYKS030_RS00255 PF02565 Recombination protein O C terminal SPYKS030_RS00255 PF11967 Recombination protein O N terminal SPYKS030_RS00260 PF02504 Fatty acid synthesis protein SPYKS030_RS00265 PF00550 Phosphopantetheine attachment site SPYKS030_RS00270 PF01259 SAICAR synthetase SPYKS030_RS00275 PF02769 AIR synthase related protein, C-terminal domain SPYKS030_RS00275 PF00586 AIR synthase related protein, N-terminal domain SPYKS030_RS00275 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SPYKS030_RS00280 PF00156 Phosphoribosyl transferase domain SPYKS030_RS00280 PF13537 Glutamine amidotransferase domain SPYKS030_RS00285 PF02769 AIR synthase related protein, C-terminal domain SPYKS030_RS00285 PF00586 AIR synthase related protein, N-terminal domain SPYKS030_RS00290 PF00551 Formyl transferase SPYKS030_RS00295 PF01808 AICARFT/IMPCHase bienzyme SPYKS030_RS00295 PF02142 MGS-like domain SPYKS030_RS00305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SPYKS030_RS00305 PF02844 Phosphoribosylglycinamide synthetase, N domain SPYKS030_RS00305 PF02843 Phosphoribosylglycinamide synthetase, C domain SPYKS030_RS00310 PF00731 AIR carboxylase SPYKS030_RS00315 PF02222 ATP-grasp domain SPYKS030_RS00315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SPYKS030_RS00325 PF10397 Adenylosuccinate lyase C-terminus SPYKS030_RS00325 PF00206 Lyase SPYKS030_RS00335 PF05496 Holliday junction DNA helicase RuvB P-loop domain SPYKS030_RS00335 PF05491 RuvB C-terminal winged helix domain SPYKS030_RS00335 PF17864 RuvB AAA lid domain SPYKS030_RS00340 PF01451 Low molecular weight phosphotyrosine protein phosphatase SPYKS030_RS00350 PF01757 Acyltransferase family SPYKS030_RS00355 PF00465 Iron-containing alcohol dehydrogenase SPYKS030_RS00355 PF00171 Aldehyde dehydrogenase family SPYKS030_RS00360 PF00107 Zinc-binding dehydrogenase SPYKS030_RS00360 PF08240 Alcohol dehydrogenase GroES-like domain SPYKS030_RS00365 PF01554 MatE SPYKS030_RS00370 PF00338 Ribosomal protein S10p/S20e SPYKS030_RS00375 PF00297 Ribosomal protein L3 SPYKS030_RS00380 PF00573 Ribosomal protein L4/L1 family SPYKS030_RS00385 PF00276 Ribosomal protein L23 SPYKS030_RS00390 PF00181 Ribosomal Proteins L2, RNA binding domain SPYKS030_RS00390 PF03947 Ribosomal Proteins L2, C-terminal domain SPYKS030_RS00395 PF00203 Ribosomal protein S19 SPYKS030_RS00400 PF00237 Ribosomal protein L22p/L17e SPYKS030_RS00405 PF00189 Ribosomal protein S3, C-terminal domain SPYKS030_RS00405 PF07650 KH domain SPYKS030_RS00410 PF00252 Ribosomal protein L16p/L10e SPYKS030_RS00415 PF00831 Ribosomal L29 protein SPYKS030_RS00420 PF00366 Ribosomal protein S17 SPYKS030_RS00425 PF00238 Ribosomal protein L14p/L23e SPYKS030_RS00430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SPYKS030_RS00430 PF00467 KOW motif SPYKS030_RS00435 PF00281 Ribosomal protein L5 SPYKS030_RS00435 PF00673 ribosomal L5P family C-terminus SPYKS030_RS00440 PF00253 Ribosomal protein S14p/S29e SPYKS030_RS00445 PF00410 Ribosomal protein S8 SPYKS030_RS00450 PF00347 Ribosomal protein L6 SPYKS030_RS00455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SPYKS030_RS00460 PF00333 Ribosomal protein S5, N-terminal domain SPYKS030_RS00460 PF03719 Ribosomal protein S5, C-terminal domain SPYKS030_RS00465 PF00327 Ribosomal protein L30p/L7e SPYKS030_RS00470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SPYKS030_RS00475 PF00344 SecY translocase SPYKS030_RS00485 PF01176 Translation initiation factor 1A / IF-1 SPYKS030_RS00490 PF00444 Ribosomal protein L36 SPYKS030_RS00495 PF00416 Ribosomal protein S13/S18 SPYKS030_RS00500 PF00411 Ribosomal protein S11 SPYKS030_RS00505 PF01000 RNA polymerase Rpb3/RpoA insert domain SPYKS030_RS00505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SPYKS030_RS00505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SPYKS030_RS00510 PF01196 Ribosomal protein L17 SPYKS030_RS00600 PF00288 GHMP kinases N terminal domain SPYKS030_RS00600 PF08544 GHMP kinases C terminal SPYKS030_RS00605 PF00288 GHMP kinases N terminal domain SPYKS030_RS00605 PF08544 GHMP kinases C terminal SPYKS030_RS00610 PF08544 GHMP kinases C terminal SPYKS030_RS00610 PF00288 GHMP kinases N terminal domain SPYKS030_RS00615 PF01047 MarR family SPYKS030_RS00620 PF00005 ABC transporter SPYKS030_RS00625 PF00950 ABC 3 transport family SPYKS030_RS00635 PF01479 S4 domain SPYKS030_RS00635 PF00579 tRNA synthetases class I (W and Y) SPYKS030_RS00640 PF00905 Penicillin binding protein transpeptidase domain SPYKS030_RS00640 PF00912 Transglycosylase SPYKS030_RS00645 PF10385 RNA polymerase beta subunit external 1 domain SPYKS030_RS00645 PF04563 RNA polymerase beta subunit SPYKS030_RS00645 PF04560 RNA polymerase Rpb2, domain 7 SPYKS030_RS00645 PF04561 RNA polymerase Rpb2, domain 2 SPYKS030_RS00645 PF04565 RNA polymerase Rpb2, domain 3 SPYKS030_RS00645 PF00562 RNA polymerase Rpb2, domain 6 SPYKS030_RS00650 PF04997 RNA polymerase Rpb1, domain 1 SPYKS030_RS00650 PF00623 RNA polymerase Rpb1, domain 2 SPYKS030_RS00650 PF04983 RNA polymerase Rpb1, domain 3 SPYKS030_RS00650 PF05000 RNA polymerase Rpb1, domain 4 SPYKS030_RS00650 PF04998 RNA polymerase Rpb1, domain 5 SPYKS030_RS00660 PF00437 Type II/IV secretion system protein SPYKS030_RS00665 PF00482 Type II secretion system (T2SS), protein F SPYKS030_RS00670 PF07963 Prokaryotic N-terminal methylation motif SPYKS030_RS00700 PF00871 Acetokinase family SPYKS030_RS00710 PF14748 Pyrroline-5-carboxylate reductase dimerisation SPYKS030_RS00710 PF03807 NADP oxidoreductase coenzyme F420-dependent SPYKS030_RS00715 PF05343 M42 glutamyl aminopeptidase SPYKS030_RS00730 PF00085 Thioredoxin SPYKS030_RS00735 PF01588 Putative tRNA binding domain SPYKS030_RS00735 PF14794 Domain of unknown function (DUF4479) SPYKS030_RS00740 PF00436 Single-strand binding protein family SPYKS030_RS00750 PF01712 Deoxynucleoside kinase SPYKS030_RS00755 PF01207 Dihydrouridine synthase (Dus) SPYKS030_RS00760 PF01430 Hsp33 protein SPYKS030_RS00770 PF08341 Thioester domain SPYKS030_RS00770 PF17802 Prealbumin-like fold domain SPYKS030_RS00780 PF12892 Spy0128-like isopeptide containing domain SPYKS030_RS00785 PF04203 Sortase domain SPYKS030_RS00810 PF02667 Short chain fatty acid transporter SPYKS030_RS00820 PF02803 Thiolase, C-terminal domain SPYKS030_RS00820 PF00108 Thiolase, N-terminal domain SPYKS030_RS00825 PF01144 Coenzyme A transferase SPYKS030_RS00830 PF01144 Coenzyme A transferase SPYKS030_RS00840 PF01042 Endoribonuclease L-PSP SPYKS030_RS00855 PF01496 V-type ATPase 116kDa subunit family SPYKS030_RS00860 PF00137 ATP synthase subunit C SPYKS030_RS00870 PF01992 ATP synthase (C/AC39) subunit SPYKS030_RS00875 PF01990 ATP synthase (F/14-kDa) subunit SPYKS030_RS00880 PF16886 ATPsynthase alpha/beta subunit N-term extension SPYKS030_RS00880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYKS030_RS00880 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYKS030_RS00885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYKS030_RS00885 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYKS030_RS00890 PF01813 ATP synthase subunit D SPYKS030_RS00905 PF00709 Adenylosuccinate synthetase SPYKS030_RS00910 PF02608 ABC transporter substrate-binding protein PnrA-like SPYKS030_RS00915 PF00467 KOW motif SPYKS030_RS00915 PF02357 Transcription termination factor nusG SPYKS030_RS00930 PF01289 Thiol-activated cytolysin SPYKS030_RS00930 PF17440 Thiol-activated cytolysin beta sandwich domain SPYKS030_RS00950 PF01053 Cys/Met metabolism PLP-dependent enzyme SPYKS030_RS00955 PF00133 tRNA synthetases class I (I, L, M and V) SPYKS030_RS00955 PF13603 Leucyl-tRNA synthetase, Domain 2 SPYKS030_RS00955 PF09334 tRNA synthetases class I (M) SPYKS030_RS00955 PF08264 Anticodon-binding domain of tRNA SPYKS030_RS00960 PF03611 PTS system sugar-specific permease component SPYKS030_RS00965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS00970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYKS030_RS00975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPYKS030_RS00980 PF01261 Xylose isomerase-like TIM barrel SPYKS030_RS00985 PF00596 Class II Aldolase and Adducin N-terminal domain SPYKS030_RS01005 PF00571 CBS domain SPYKS030_RS01005 PF00005 ABC transporter SPYKS030_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS01015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SPYKS030_RS01015 PF01367 5'-3' exonuclease, C-terminal SAM fold SPYKS030_RS01015 PF00476 DNA polymerase family A SPYKS030_RS01025 PF01475 Ferric uptake regulator family SPYKS030_RS01040 PF01702 Queuine tRNA-ribosyltransferase SPYKS030_RS01050 PF02632 BioY family SPYKS030_RS01055 PF12706 Beta-lactamase superfamily domain SPYKS030_RS01060 PF14437 MafB19-like deaminase SPYKS030_RS01075 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPYKS030_RS01075 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYKS030_RS01080 PF00342 Phosphoglucose isomerase SPYKS030_RS01090 PF01694 Rhomboid family SPYKS030_RS01095 PF00483 Nucleotidyl transferase SPYKS030_RS01100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SPYKS030_RS01100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SPYKS030_RS01110 PF00664 ABC transporter transmembrane region SPYKS030_RS01110 PF00005 ABC transporter SPYKS030_RS01115 PF00005 ABC transporter SPYKS030_RS01115 PF00664 ABC transporter transmembrane region SPYKS030_RS01120 PF02677 Epoxyqueuosine reductase QueH SPYKS030_RS01125 PF00692 dUTPase SPYKS030_RS01130 PF18073 Rubredoxin metal binding domain SPYKS030_RS01135 PF00484 Carbonic anhydrase SPYKS030_RS01140 PF01987 Mitochondrial biogenesis AIM24 SPYKS030_RS01145 PF00749 tRNA synthetases class I (E and Q), catalytic domain SPYKS030_RS01150 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SPYKS030_RS01150 PF00989 PAS fold SPYKS030_RS01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS01150 PF17203 Single cache domain 3 SPYKS030_RS01165 PF00825 Ribonuclease P SPYKS030_RS01170 PF02096 60Kd inner membrane protein SPYKS030_RS01175 PF14804 Jag N-terminus SPYKS030_RS01175 PF01424 R3H domain SPYKS030_RS01180 PF00468 Ribosomal protein L34 SPYKS030_RS01185 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SPYKS030_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS01215 PF00701 Dihydrodipicolinate synthetase family SPYKS030_RS01220 PF00480 ROK family SPYKS030_RS01230 PF01026 TatD related DNase SPYKS030_RS01235 PF13331 Domain of unknown function (DUF4093) SPYKS030_RS01240 PF00398 Ribosomal RNA adenine dimethylase SPYKS030_RS01245 PF03193 RsgA GTPase SPYKS030_RS01245 PF16745 RsgA N-terminal domain SPYKS030_RS01250 PF00834 Ribulose-phosphate 3 epimerase family SPYKS030_RS01255 PF04263 Thiamin pyrophosphokinase, catalytic domain SPYKS030_RS01255 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SPYKS030_RS01260 PF02646 RmuC family SPYKS030_RS01265 PF01966 HD domain SPYKS030_RS01270 PF09182 Bacterial purine repressor, N-terminal SPYKS030_RS01270 PF00156 Phosphoribosyl transferase domain SPYKS030_RS01280 PF00164 Ribosomal protein S12/S23 SPYKS030_RS01285 PF00177 Ribosomal protein S7p/S5e SPYKS030_RS01290 PF00679 Elongation factor G C-terminus SPYKS030_RS01290 PF00009 Elongation factor Tu GTP binding domain SPYKS030_RS01290 PF03144 Elongation factor Tu domain 2 SPYKS030_RS01290 PF03764 Elongation factor G, domain IV SPYKS030_RS01290 PF14492 Elongation Factor G, domain II SPYKS030_RS01295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPYKS030_RS01295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SPYKS030_RS01305 PF00005 ABC transporter SPYKS030_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS01320 PF02673 Bacitracin resistance protein BacA SPYKS030_RS01325 PF05389 Negative regulator of genetic competence (MecA) SPYKS030_RS01330 PF00953 Glycosyl transferase family 4 SPYKS030_RS01335 PF00005 ABC transporter SPYKS030_RS01340 PF01458 Uncharacterized protein family (UPF0051) SPYKS030_RS01345 PF00266 Aminotransferase class-V SPYKS030_RS01350 PF01592 NifU-like N terminal domain SPYKS030_RS01355 PF01458 Uncharacterized protein family (UPF0051) SPYKS030_RS01360 PF07943 Penicillin-binding protein 5, C-terminal domain SPYKS030_RS01360 PF00768 D-alanyl-D-alanine carboxypeptidase SPYKS030_RS01365 PF07943 Penicillin-binding protein 5, C-terminal domain SPYKS030_RS01365 PF00768 D-alanyl-D-alanine carboxypeptidase SPYKS030_RS01370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPYKS030_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS01380 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS01380 PF12911 N-terminal TM domain of oligopeptide transport permease C SPYKS030_RS01385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPYKS030_RS01385 PF00005 ABC transporter SPYKS030_RS01390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPYKS030_RS01390 PF00005 ABC transporter SPYKS030_RS01440 PF01416 tRNA pseudouridine synthase SPYKS030_RS01445 PF08543 Phosphomethylpyrimidine kinase SPYKS030_RS01450 PF07155 ECF-type riboflavin transporter, S component SPYKS030_RS01455 PF04260 Protein of unknown function (DUF436) SPYKS030_RS01460 PF00924 Mechanosensitive ion channel SPYKS030_RS01465 PF05697 Bacterial trigger factor protein (TF) SPYKS030_RS01465 PF05698 Bacterial trigger factor protein (TF) C-terminus SPYKS030_RS01465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SPYKS030_RS01470 PF05066 HB1, ASXL, restriction endonuclease HTH domain SPYKS030_RS01475 PF00117 Glutamine amidotransferase class-I SPYKS030_RS01475 PF06418 CTP synthase N-terminus SPYKS030_RS01490 PF01116 Fructose-bisphosphate aldolase class-II SPYKS030_RS01495 PF00830 Ribosomal L28 family SPYKS030_RS01500 PF03780 Asp23 family, cell envelope-related function SPYKS030_RS01505 PF02734 DAK2 domain SPYKS030_RS01505 PF13684 Dihydroxyacetone kinase family SPYKS030_RS01515 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SPYKS030_RS01520 PF00162 Phosphoglycerate kinase SPYKS030_RS01530 PF13411 MerR HTH family regulatory protein SPYKS030_RS01535 PF00120 Glutamine synthetase, catalytic domain SPYKS030_RS01535 PF03951 Glutamine synthetase, beta-Grasp domain SPYKS030_RS01540 PF17770 Ribonuclease J C-terminal domain SPYKS030_RS01540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SPYKS030_RS01540 PF00753 Metallo-beta-lactamase superfamily SPYKS030_RS01545 PF07288 Protein of unknown function (DUF1447) SPYKS030_RS01550 PF00814 Glycoprotease family SPYKS030_RS01555 PF00583 Acetyltransferase (GNAT) family SPYKS030_RS01560 PF00814 Glycoprotease family SPYKS030_RS01565 PF00253 Ribosomal protein S14p/S29e SPYKS030_RS01575 PF01048 Phosphorylase superfamily SPYKS030_RS01580 PF01773 Na+ dependent nucleoside transporter N-terminus SPYKS030_RS01580 PF07670 Nucleoside recognition SPYKS030_RS01580 PF07662 Na+ dependent nucleoside transporter C-terminus SPYKS030_RS01585 PF01791 DeoC/LacD family aldolase SPYKS030_RS01595 PF08279 HTH domain SPYKS030_RS01595 PF04394 Protein of unknown function, DUF536 SPYKS030_RS01605 PF07739 TipAS antibiotic-recognition domain SPYKS030_RS01605 PF13411 MerR HTH family regulatory protein SPYKS030_RS01610 PF02575 YbaB/EbfC DNA-binding family SPYKS030_RS01625 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPYKS030_RS01625 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SPYKS030_RS01625 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPYKS030_RS01630 PF13545 Crp-like helix-turn-helix domain SPYKS030_RS01635 PF07690 Major Facilitator Superfamily SPYKS030_RS01645 PF00230 Major intrinsic protein SPYKS030_RS01660 PF00144 Beta-lactamase SPYKS030_RS01670 PF02901 Pyruvate formate lyase-like SPYKS030_RS01670 PF01228 Glycine radical SPYKS030_RS01675 PF00817 impB/mucB/samB family SPYKS030_RS01675 PF11799 impB/mucB/samB family C-terminal domain SPYKS030_RS01675 PF11798 IMS family HHH motif SPYKS030_RS01685 PF13538 UvrD-like helicase C-terminal domain SPYKS030_RS01685 PF14490 Helix-hairpin-helix containing domain SPYKS030_RS01685 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SPYKS030_RS01690 PF10502 Signal peptidase, peptidase S26 SPYKS030_RS01695 PF11858 Domain of unknown function (DUF3378) SPYKS030_RS01695 PF01351 Ribonuclease HII SPYKS030_RS01710 PF01713 Smr domain SPYKS030_RS01710 PF00488 MutS domain V SPYKS030_RS01720 PF00085 Thioredoxin SPYKS030_RS01725 PF01381 Helix-turn-helix SPYKS030_RS01730 PF00730 HhH-GPD superfamily base excision DNA repair protein SPYKS030_RS01730 PF14815 NUDIX domain SPYKS030_RS01740 PF01250 Ribosomal protein S6 SPYKS030_RS01745 PF00436 Single-strand binding protein family SPYKS030_RS01750 PF01084 Ribosomal protein S18 SPYKS030_RS01765 PF00005 ABC transporter SPYKS030_RS01765 PF17755 UvrA DNA-binding domain SPYKS030_RS01765 PF17760 UvrA interaction domain SPYKS030_RS01770 PF00557 Metallopeptidase family M24 SPYKS030_RS01770 PF01321 Creatinase/Prolidase N-terminal domain SPYKS030_RS01775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPYKS030_RS01780 PF09285 Elongation factor P, C-terminal SPYKS030_RS01780 PF08207 Elongation factor P (EF-P) KOW-like domain SPYKS030_RS01780 PF01132 Elongation factor P (EF-P) OB domain SPYKS030_RS01785 PF03780 Asp23 family, cell envelope-related function SPYKS030_RS01790 PF01029 NusB family SPYKS030_RS01795 PF00356 Bacterial regulatory proteins, lacI family SPYKS030_RS01800 PF00251 Glycosyl hydrolases family 32 N-terminal domain SPYKS030_RS01800 PF08244 Glycosyl hydrolases family 32 C terminal SPYKS030_RS01805 PF02378 Phosphotransferase system, EIIC SPYKS030_RS01805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPYKS030_RS01805 PF00367 phosphotransferase system, EIIB SPYKS030_RS01815 PF00480 ROK family SPYKS030_RS01820 PF01238 Phosphomannose isomerase type I SPYKS030_RS01825 PF01043 SecA preprotein cross-linking domain SPYKS030_RS01825 PF02810 SEC-C motif SPYKS030_RS01825 PF07517 SecA DEAD-like domain SPYKS030_RS01825 PF07516 SecA Wing and Scaffold domain SPYKS030_RS01830 PF01648 4'-phosphopantetheinyl transferase superfamily SPYKS030_RS01835 PF00842 Alanine racemase, C-terminal domain SPYKS030_RS01835 PF01168 Alanine racemase, N-terminal domain SPYKS030_RS01840 PF01476 LysM domain SPYKS030_RS01840 PF05257 CHAP domain SPYKS030_RS01850 PF01497 Periplasmic binding protein SPYKS030_RS01855 PF01032 FecCD transport family SPYKS030_RS01860 PF00005 ABC transporter SPYKS030_RS01865 PF00005 ABC transporter SPYKS030_RS01865 PF00664 ABC transporter transmembrane region SPYKS030_RS01870 PF00664 ABC transporter transmembrane region SPYKS030_RS01870 PF00005 ABC transporter SPYKS030_RS01885 PF00005 ABC transporter SPYKS030_RS01895 PF00271 Helicase conserved C-terminal domain SPYKS030_RS01895 PF00270 DEAD/DEAH box helicase SPYKS030_RS01895 PF17191 RecG wedge domain SPYKS030_RS01900 PF00005 ABC transporter SPYKS030_RS01910 PF17763 Glutaminase/Asparaginase C-terminal domain SPYKS030_RS01910 PF00710 Asparaginase, N-terminal SPYKS030_RS01925 PF00155 Aminotransferase class I and II SPYKS030_RS01930 PF08222 CodY helix-turn-helix domain SPYKS030_RS01930 PF06018 CodY GAF-like domain SPYKS030_RS01935 PF00857 Isochorismatase family SPYKS030_RS01945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SPYKS030_RS01945 PF02896 PEP-utilising enzyme, TIM barrel domain SPYKS030_RS01945 PF00391 PEP-utilising enzyme, mobile domain SPYKS030_RS01950 PF02686 Glu-tRNAGln amidotransferase C subunit SPYKS030_RS01955 PF01425 Amidase SPYKS030_RS01960 PF02934 GatB/GatE catalytic domain SPYKS030_RS01960 PF02637 GatB domain SPYKS030_RS01970 PF04226 Transglycosylase associated protein SPYKS030_RS01975 PF00300 Histidine phosphatase superfamily (branch 1) SPYKS030_RS01990 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SPYKS030_RS01990 PF01628 HrcA protein C terminal domain SPYKS030_RS01995 PF01025 GrpE SPYKS030_RS02000 PF00012 Hsp70 protein SPYKS030_RS02005 PF00684 DnaJ central domain SPYKS030_RS02005 PF01556 DnaJ C terminal domain SPYKS030_RS02005 PF00226 DnaJ domain SPYKS030_RS02010 PF00378 Enoyl-CoA hydratase/isomerase SPYKS030_RS02020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SPYKS030_RS02020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SPYKS030_RS02025 PF00550 Phosphopantetheine attachment site SPYKS030_RS02030 PF03060 Nitronate monooxygenase SPYKS030_RS02035 PF00698 Acyl transferase domain SPYKS030_RS02045 PF02801 Beta-ketoacyl synthase, C-terminal domain SPYKS030_RS02045 PF00109 Beta-ketoacyl synthase, N-terminal domain SPYKS030_RS02050 PF00364 Biotin-requiring enzyme SPYKS030_RS02055 PF07977 FabA-like domain SPYKS030_RS02060 PF02785 Biotin carboxylase C-terminal domain SPYKS030_RS02060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPYKS030_RS02060 PF00289 Biotin carboxylase, N-terminal domain SPYKS030_RS02065 PF17848 Acetyl-coA carboxylase zinc finger domain SPYKS030_RS02065 PF01039 Carboxyl transferase domain SPYKS030_RS02070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SPYKS030_RS02075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPYKS030_RS02075 PF02403 Seryl-tRNA synthetase N-terminal domain SPYKS030_RS02085 PF13808 DDE_Tnp_1-associated SPYKS030_RS02085 PF01609 Transposase DDE domain SPYKS030_RS02095 PF03613 PTS system mannose/fructose/sorbose family IID component SPYKS030_RS02100 PF03609 PTS system sorbose-specific iic component SPYKS030_RS02105 PF03830 PTS system sorbose subfamily IIB component SPYKS030_RS02105 PF03610 PTS system fructose IIA component SPYKS030_RS02115 PF00860 Permease family SPYKS030_RS02120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SPYKS030_RS02130 PF03816 Cell envelope-related transcriptional attenuator domain SPYKS030_RS02140 PF01230 HIT domain SPYKS030_RS02145 PF00005 ABC transporter SPYKS030_RS02150 PF05975 Bacterial ABC transporter protein EcsB SPYKS030_RS02160 PF02390 Putative methyltransferase SPYKS030_RS02170 PF02576 RimP N-terminal domain SPYKS030_RS02170 PF17384 RimP C-terminal SH3 domain SPYKS030_RS02175 PF00575 S1 RNA binding domain SPYKS030_RS02175 PF13184 NusA-like KH domain SPYKS030_RS02175 PF08529 NusA N-terminal domain SPYKS030_RS02180 PF04296 Protein of unknown function (DUF448) SPYKS030_RS02185 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SPYKS030_RS02190 PF11987 Translation-initiation factor 2 SPYKS030_RS02190 PF00009 Elongation factor Tu GTP binding domain SPYKS030_RS02190 PF04760 Translation initiation factor IF-2, N-terminal region SPYKS030_RS02195 PF02033 Ribosome-binding factor A SPYKS030_RS02200 PF07859 alpha/beta hydrolase fold SPYKS030_RS02205 PF03965 Penicillinase repressor SPYKS030_RS02210 PF00403 Heavy-metal-associated domain SPYKS030_RS02225 PF08220 DeoR-like helix-turn-helix domain SPYKS030_RS02225 PF00455 DeoR C terminal sensor domain SPYKS030_RS02250 PF02502 Ribose/Galactose Isomerase SPYKS030_RS02255 PF02502 Ribose/Galactose Isomerase SPYKS030_RS02265 PF01791 DeoC/LacD family aldolase SPYKS030_RS02270 PF03458 UPF0126 domain SPYKS030_RS02280 PF00440 Bacterial regulatory proteins, tetR family SPYKS030_RS02285 PF02645 Uncharacterised protein, DegV family COG1307 SPYKS030_RS02295 PF02690 Na+/Pi-cotransporter SPYKS030_RS02300 PF01979 Amidohydrolase family SPYKS030_RS02305 PF00248 Aldo/keto reductase family SPYKS030_RS02310 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SPYKS030_RS02320 PF02091 Glycyl-tRNA synthetase alpha subunit SPYKS030_RS02325 PF02092 Glycyl-tRNA synthetase beta subunit SPYKS030_RS02330 PF05979 Bacterial protein of unknown function (DUF896) SPYKS030_RS02335 PF03413 Peptidase propeptide and YPEB domain SPYKS030_RS02345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SPYKS030_RS02345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SPYKS030_RS02350 PF01266 FAD dependent oxidoreductase SPYKS030_RS02350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SPYKS030_RS02355 PF00230 Major intrinsic protein SPYKS030_RS02360 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS02360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYKS030_RS02370 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPYKS030_RS02375 PF00456 Transketolase, thiamine diphosphate binding domain SPYKS030_RS02375 PF02779 Transketolase, pyrimidine binding domain SPYKS030_RS02375 PF02780 Transketolase, C-terminal domain SPYKS030_RS02385 PF00005 ABC transporter SPYKS030_RS02500 PF17288 Terminase RNAseH like domain SPYKS030_RS02500 PF04466 Phage terminase large subunit SPYKS030_RS02615 PF01520 N-acetylmuramoyl-L-alanine amidase SPYKS030_RS02615 PF05257 CHAP domain SPYKS030_RS02615 PF08460 Bacterial SH3 domain SPYKS030_RS02635 PF00696 Amino acid kinase family SPYKS030_RS02640 PF00171 Aldehyde dehydrogenase family SPYKS030_RS02650 PF01795 MraW methylase family SPYKS030_RS02660 PF03717 Penicillin-binding Protein dimerisation domain SPYKS030_RS02660 PF03793 PASTA domain SPYKS030_RS02660 PF00905 Penicillin binding protein transpeptidase domain SPYKS030_RS02665 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SPYKS030_RS02665 PF00953 Glycosyl transferase family 4 SPYKS030_RS02670 PF00270 DEAD/DEAH box helicase SPYKS030_RS02670 PF00271 Helicase conserved C-terminal domain SPYKS030_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS02680 PF00005 ABC transporter SPYKS030_RS02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS02695 PF00324 Amino acid permease SPYKS030_RS02700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SPYKS030_RS02700 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SPYKS030_RS02700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SPYKS030_RS02705 PF02540 NAD synthase SPYKS030_RS02710 PF03051 Peptidase C1-like family SPYKS030_RS02715 PF00912 Transglycosylase SPYKS030_RS02715 PF00905 Penicillin binding protein transpeptidase domain SPYKS030_RS02720 PF03838 Recombination protein U SPYKS030_RS02725 PF06908 YspA SLOG family SPYKS030_RS02730 PF05103 DivIVA protein SPYKS030_RS02740 PF02926 THUMP domain SPYKS030_RS02740 PF01170 Putative RNA methylase family UPF0020 SPYKS030_RS02745 PF18041 MapZ extracellular domain 1 SPYKS030_RS02745 PF18708 MapZ extracellular C-terminal domain 2 SPYKS030_RS02750 PF02664 S-Ribosylhomocysteinase (LuxS) SPYKS030_RS02765 PF01144 Coenzyme A transferase SPYKS030_RS02775 PF00108 Thiolase, N-terminal domain SPYKS030_RS02775 PF02803 Thiolase, C-terminal domain SPYKS030_RS02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYKS030_RS02780 PF03466 LysR substrate binding domain SPYKS030_RS02785 PF01966 HD domain SPYKS030_RS02785 PF12072 Domain of unknown function (DUF3552) SPYKS030_RS02785 PF00013 KH domain SPYKS030_RS02790 PF00625 Guanylate kinase SPYKS030_RS02795 PF01192 RNA polymerase Rpb6 SPYKS030_RS02800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SPYKS030_RS02800 PF18074 Primosomal protein N C-terminal domain SPYKS030_RS02800 PF04851 Type III restriction enzyme, res subunit SPYKS030_RS02800 PF00271 Helicase conserved C-terminal domain SPYKS030_RS02800 PF17764 3′ DNA-binding domain (3′BD) SPYKS030_RS02805 PF00551 Formyl transferase SPYKS030_RS02805 PF02911 Formyl transferase, C-terminal domain SPYKS030_RS02810 PF01189 16S rRNA methyltransferase RsmB/F SPYKS030_RS02810 PF01029 NusB family SPYKS030_RS02820 PF00069 Protein kinase domain SPYKS030_RS02820 PF03793 PASTA domain SPYKS030_RS02830 PF00672 HAMP domain SPYKS030_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS02830 PF07730 Histidine kinase SPYKS030_RS02835 PF00072 Response regulator receiver domain SPYKS030_RS02835 PF00196 Bacterial regulatory proteins, luxR family SPYKS030_RS02840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPYKS030_RS02845 PF00575 S1 RNA binding domain SPYKS030_RS02850 PF00291 Pyridoxal-phosphate dependent enzyme SPYKS030_RS02855 PF01205 Uncharacterized protein family UPF0029 SPYKS030_RS02855 PF09186 Domain of unknown function (DUF1949) SPYKS030_RS02870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SPYKS030_RS02870 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SPYKS030_RS02950 PF04167 Protein of unknown function (DUF402) SPYKS030_RS02955 PF02631 RecX family SPYKS030_RS02960 PF02899 Phage integrase, N-terminal SAM-like domain SPYKS030_RS02960 PF00589 Phage integrase family SPYKS030_RS03210 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYKS030_RS03210 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPYKS030_RS03220 PF05958 tRNA (Uracil-5-)-methyltransferase SPYKS030_RS03220 PF01938 TRAM domain SPYKS030_RS03230 PF01074 Glycosyl hydrolases family 38 N-terminal domain SPYKS030_RS03230 PF07748 Glycosyl hydrolases family 38 C-terminal domain SPYKS030_RS03230 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SPYKS030_RS03230 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SPYKS030_RS03230 PF09261 Alpha mannosidase middle domain SPYKS030_RS03240 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS03245 PF02838 Glycosyl hydrolase family 20, domain 2 SPYKS030_RS03245 PF07555 beta-N-acetylglucosaminidase SPYKS030_RS03250 PF00232 Glycosyl hydrolase family 1 SPYKS030_RS03255 PF00480 ROK family SPYKS030_RS03260 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS03265 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS03270 PF12010 Domain of unknown function (DUF3502) SPYKS030_RS03280 PF00672 HAMP domain SPYKS030_RS03280 PF02743 Cache domain SPYKS030_RS03280 PF06580 Histidine kinase SPYKS030_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS03285 PF00072 Response regulator receiver domain SPYKS030_RS03285 PF12833 Helix-turn-helix domain SPYKS030_RS03290 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SPYKS030_RS03290 PF02837 Glycosyl hydrolases family 2, sugar binding domain SPYKS030_RS03290 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 SPYKS030_RS03290 PF00703 Glycosyl hydrolases family 2 SPYKS030_RS03290 PF16355 Domain of unknown function (DUF4982) SPYKS030_RS03295 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SPYKS030_RS03295 PF08501 Shikimate dehydrogenase substrate binding domain SPYKS030_RS03300 PF13649 Methyltransferase domain SPYKS030_RS03315 PF01761 3-dehydroquinate synthase SPYKS030_RS03320 PF01817 Chorismate mutase type II SPYKS030_RS03320 PF00793 DAHP synthetase I family SPYKS030_RS03355 PF10458 Valyl tRNA synthetase tRNA binding arm SPYKS030_RS03355 PF00133 tRNA synthetases class I (I, L, M and V) SPYKS030_RS03355 PF08264 Anticodon-binding domain of tRNA SPYKS030_RS03370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPYKS030_RS03370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPYKS030_RS03380 PF02683 Cytochrome C biogenesis protein transmembrane region SPYKS030_RS03385 PF08534 Redoxin SPYKS030_RS03390 PF01625 Peptide methionine sulfoxide reductase SPYKS030_RS03390 PF01641 SelR domain SPYKS030_RS03410 PF01381 Helix-turn-helix SPYKS030_RS03420 PF10548 P22AR C-terminal domain SPYKS030_RS03420 PF08346 AntA/AntB antirepressor SPYKS030_RS03455 PF07261 Replication initiation and membrane attachment SPYKS030_RS03485 PF00436 Single-strand binding protein family SPYKS030_RS03495 PF05866 Endodeoxyribonuclease RusA SPYKS030_RS03555 PF02195 ParB-like nuclease domain SPYKS030_RS03695 PF01520 N-acetylmuramoyl-L-alanine amidase SPYKS030_RS03695 PF08460 Bacterial SH3 domain SPYKS030_RS03695 PF05257 CHAP domain SPYKS030_RS03710 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYKS030_RS03730 PF12833 Helix-turn-helix domain SPYKS030_RS03730 PF00072 Response regulator receiver domain SPYKS030_RS03735 PF02743 Cache domain SPYKS030_RS03735 PF00672 HAMP domain SPYKS030_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS03735 PF06580 Histidine kinase SPYKS030_RS03750 PF02863 Arginine repressor, C-terminal domain SPYKS030_RS03750 PF01316 Arginine repressor, DNA binding domain SPYKS030_RS03765 PF13673 Acetyltransferase (GNAT) domain SPYKS030_RS03770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPYKS030_RS03770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPYKS030_RS03775 PF03606 C4-dicarboxylate anaerobic carrier SPYKS030_RS03780 PF01546 Peptidase family M20/M25/M40 SPYKS030_RS03785 PF00696 Amino acid kinase family SPYKS030_RS03790 PF03590 Aspartate-ammonia ligase SPYKS030_RS03800 PF01467 Cytidylyltransferase-like SPYKS030_RS03805 PF13180 PDZ domain SPYKS030_RS03805 PF05362 Lon protease (S16) C-terminal proteolytic domain SPYKS030_RS03810 PF00356 Bacterial regulatory proteins, lacI family SPYKS030_RS03815 PF06265 Protein of unknown function (DUF1027) SPYKS030_RS03820 PF04055 Radical SAM superfamily SPYKS030_RS03830 PF00210 Ferritin-like domain SPYKS030_RS03840 PF00480 ROK family SPYKS030_RS03845 PF00581 Rhodanese-like domain SPYKS030_RS03850 PF00009 Elongation factor Tu GTP binding domain SPYKS030_RS03850 PF03144 Elongation factor Tu domain 2 SPYKS030_RS03850 PF00679 Elongation factor G C-terminus SPYKS030_RS03850 PF14492 Elongation Factor G, domain II SPYKS030_RS03860 PF08245 Mur ligase middle domain SPYKS030_RS03860 PF02875 Mur ligase family, glutamate ligase domain SPYKS030_RS03865 PF03033 Glycosyltransferase family 28 N-terminal domain SPYKS030_RS03865 PF04101 Glycosyltransferase family 28 C-terminal domain SPYKS030_RS03870 PF08478 POTRA domain, FtsQ-type SPYKS030_RS03875 PF02491 SHS2 domain inserted in FTSA SPYKS030_RS03875 PF11983 Membrane-attachment and polymerisation-promoting switch SPYKS030_RS03880 PF00091 Tubulin/FtsZ family, GTPase domain SPYKS030_RS03880 PF12327 FtsZ family, C-terminal domain SPYKS030_RS03885 PF01168 Alanine racemase, N-terminal domain SPYKS030_RS03890 PF04472 Cell division protein SepF SPYKS030_RS03900 PF17774 Putative RNA-binding domain in YlmH SPYKS030_RS03900 PF01479 S4 domain SPYKS030_RS03905 PF05103 DivIVA protein SPYKS030_RS03910 PF08264 Anticodon-binding domain of tRNA SPYKS030_RS03910 PF00133 tRNA synthetases class I (I, L, M and V) SPYKS030_RS03920 PF00293 NUDIX domain SPYKS030_RS03925 PF17871 AAA lid domain SPYKS030_RS03925 PF07724 AAA domain (Cdc48 subfamily) SPYKS030_RS03925 PF00004 ATPase family associated with various cellular activities (AAA) SPYKS030_RS03925 PF10431 C-terminal, D2-small domain, of ClpB protein SPYKS030_RS03930 PF08796 Protein of unknown function (DUF1797) SPYKS030_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS03940 PF00005 ABC transporter SPYKS030_RS03945 PF03441 FAD binding domain of DNA photolyase SPYKS030_RS03945 PF00875 DNA photolyase SPYKS030_RS03950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPYKS030_RS03950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPYKS030_RS03950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPYKS030_RS03950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPYKS030_RS03955 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SPYKS030_RS03955 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SPYKS030_RS03960 PF13742 OB-fold nucleic acid binding domain SPYKS030_RS03960 PF02601 Exonuclease VII, large subunit SPYKS030_RS03965 PF02609 Exonuclease VII small subunit SPYKS030_RS03970 PF00348 Polyprenyl synthetase SPYKS030_RS03975 PF01728 FtsJ-like methyltransferase SPYKS030_RS03975 PF01479 S4 domain SPYKS030_RS03980 PF01316 Arginine repressor, DNA binding domain SPYKS030_RS03980 PF02863 Arginine repressor, C-terminal domain SPYKS030_RS03985 PF13476 AAA domain SPYKS030_RS03995 PF02645 Uncharacterised protein, DegV family COG1307 SPYKS030_RS04000 PF13472 GDSL-like Lipase/Acylhydrolase family SPYKS030_RS04010 PF00216 Bacterial DNA-binding protein SPYKS030_RS04015 PF00589 Phage integrase family SPYKS030_RS04015 PF14659 Phage integrase, N-terminal SAM-like domain SPYKS030_RS04025 PF01381 Helix-turn-helix SPYKS030_RS04075 PF03837 RecT family SPYKS030_RS04095 PF14284 PcfJ-like protein SPYKS030_RS04250 PF05105 Bacteriophage holin family SPYKS030_RS04275 PF01180 Dihydroorotate dehydrogenase SPYKS030_RS04280 PF00300 Histidine phosphatase superfamily (branch 1) SPYKS030_RS04285 PF08279 HTH domain SPYKS030_RS04285 PF02829 3H domain SPYKS030_RS04295 PF01226 Formate/nitrite transporter SPYKS030_RS04300 PF03717 Penicillin-binding Protein dimerisation domain SPYKS030_RS04300 PF00905 Penicillin binding protein transpeptidase domain SPYKS030_RS04305 PF02132 RecR protein SPYKS030_RS04305 PF13662 Toprim domain SPYKS030_RS04310 PF07478 D-ala D-ala ligase C-terminus SPYKS030_RS04310 PF01820 D-ala D-ala ligase N-terminus SPYKS030_RS04315 PF08245 Mur ligase middle domain SPYKS030_RS04315 PF02875 Mur ligase family, glutamate ligase domain SPYKS030_RS04315 PF01225 Mur ligase family, catalytic domain SPYKS030_RS04330 PF16658 Class II release factor RF3, C-terminal domain SPYKS030_RS04330 PF03144 Elongation factor Tu domain 2 SPYKS030_RS04330 PF00009 Elongation factor Tu GTP binding domain SPYKS030_RS04335 PF00271 Helicase conserved C-terminal domain SPYKS030_RS04335 PF00270 DEAD/DEAH box helicase SPYKS030_RS04340 PF02705 K+ potassium transporter SPYKS030_RS04345 PF01541 GIY-YIG catalytic domain SPYKS030_RS04350 PF17827 PrmC N-terminal domain SPYKS030_RS04350 PF05175 Methyltransferase small domain SPYKS030_RS04355 PF01553 Acyltransferase SPYKS030_RS04360 PF10531 SLBB domain SPYKS030_RS04365 PF00753 Metallo-beta-lactamase superfamily SPYKS030_RS04365 PF13567 Domain of unknown function (DUF4131) SPYKS030_RS04365 PF03772 Competence protein SPYKS030_RS04375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SPYKS030_RS04375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SPYKS030_RS04400 PF02547 Queuosine biosynthesis protein SPYKS030_RS04405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SPYKS030_RS04410 PF00849 RNA pseudouridylate synthase SPYKS030_RS04410 PF01479 S4 domain SPYKS030_RS04420 PF08439 Oligopeptidase F SPYKS030_RS04420 PF01432 Peptidase family M3 SPYKS030_RS04425 PF07690 Major Facilitator Superfamily SPYKS030_RS04430 PF01596 O-methyltransferase SPYKS030_RS04435 PF13145 PPIC-type PPIASE domain SPYKS030_RS04440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPYKS030_RS04440 PF01411 tRNA synthetases class II (A) SPYKS030_RS04440 PF02272 DHHA1 domain SPYKS030_RS04445 PF01381 Helix-turn-helix SPYKS030_RS04475 PF00268 Ribonucleotide reductase, small chain SPYKS030_RS04480 PF08343 Ribonucleotide reductase N-terminal SPYKS030_RS04480 PF02867 Ribonucleotide reductase, barrel domain SPYKS030_RS04480 PF00317 Ribonucleotide reductase, all-alpha domain SPYKS030_RS04485 PF00462 Glutaredoxin SPYKS030_RS04490 PF00381 PTS HPr component phosphorylation site SPYKS030_RS04495 PF02896 PEP-utilising enzyme, TIM barrel domain SPYKS030_RS04495 PF00391 PEP-utilising enzyme, mobile domain SPYKS030_RS04495 PF05524 PEP-utilising enzyme, N-terminal SPYKS030_RS04500 PF00171 Aldehyde dehydrogenase family SPYKS030_RS04505 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SPYKS030_RS04505 PF01522 Polysaccharide deacetylase SPYKS030_RS04510 PF00270 DEAD/DEAH box helicase SPYKS030_RS04510 PF00271 Helicase conserved C-terminal domain SPYKS030_RS04515 PF00485 Phosphoribulokinase / Uridine kinase family SPYKS030_RS04530 PF13185 GAF domain SPYKS030_RS04535 PF12169 DNA polymerase III subunits gamma and tau domain III SPYKS030_RS04545 PF02237 Biotin protein ligase C terminal domain SPYKS030_RS04545 PF03099 Biotin/lipoate A/B protein ligase family SPYKS030_RS04545 PF08279 HTH domain SPYKS030_RS04555 PF02773 S-adenosylmethionine synthetase, C-terminal domain SPYKS030_RS04555 PF02772 S-adenosylmethionine synthetase, central domain SPYKS030_RS04555 PF00438 S-adenosylmethionine synthetase, N-terminal domain SPYKS030_RS04560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPYKS030_RS04565 PF01378 B domain SPYKS030_RS04565 PF00746 LPXTG cell wall anchor motif SPYKS030_RS04565 PF17573 GA-like domain SPYKS030_RS04565 PF01378 B domain SPYKS030_RS04565 PF00746 LPXTG cell wall anchor motif SPYKS030_RS04565 PF17573 GA-like domain SPYKS030_RS04570 PF13302 Acetyltransferase (GNAT) domain SPYKS030_RS04575 PF07085 DRTGG domain SPYKS030_RS04575 PF00571 CBS domain SPYKS030_RS04575 PF03061 Thioesterase superfamily SPYKS030_RS04575 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS04580 PF00557 Metallopeptidase family M24 SPYKS030_RS04590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPYKS030_RS04595 PF01202 Shikimate kinase SPYKS030_RS04600 PF03816 Cell envelope-related transcriptional attenuator domain SPYKS030_RS04605 PF05958 tRNA (Uracil-5-)-methyltransferase SPYKS030_RS04605 PF01938 TRAM domain SPYKS030_RS04620 PF08903 Domain of unknown function (DUF1846) SPYKS030_RS04625 PF07690 Major Facilitator Superfamily SPYKS030_RS04635 PF01479 S4 domain SPYKS030_RS04635 PF00849 RNA pseudouridylate synthase SPYKS030_RS04640 PF13276 HTH-like domain SPYKS030_RS04640 PF00665 Integrase core domain SPYKS030_RS04640 PF13333 Integrase core domain SPYKS030_RS04645 PF13276 HTH-like domain SPYKS030_RS04645 PF00665 Integrase core domain SPYKS030_RS04645 PF13333 Integrase core domain SPYKS030_RS04660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SPYKS030_RS04660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SPYKS030_RS04675 PF09269 Domain of unknown function (DUF1967) SPYKS030_RS04675 PF01018 GTP1/OBG SPYKS030_RS04675 PF01926 50S ribosome-binding GTPase SPYKS030_RS04690 PF00232 Glycosyl hydrolase family 1 SPYKS030_RS04700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYKS030_RS04700 PF05043 Mga helix-turn-helix domain SPYKS030_RS04700 PF08279 HTH domain SPYKS030_RS04700 PF00874 PRD domain SPYKS030_RS04705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS04710 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPYKS030_RS04720 PF02378 Phosphotransferase system, EIIC SPYKS030_RS04725 PF00005 ABC transporter SPYKS030_RS04730 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYKS030_RS04735 PF02151 UvrB/uvrC motif SPYKS030_RS04735 PF04851 Type III restriction enzyme, res subunit SPYKS030_RS04735 PF00271 Helicase conserved C-terminal domain SPYKS030_RS04735 PF12344 Ultra-violet resistance protein B SPYKS030_RS04735 PF17757 UvrB interaction domain SPYKS030_RS04745 PF13193 AMP-binding enzyme C-terminal domain SPYKS030_RS04745 PF00501 AMP-binding enzyme SPYKS030_RS04750 PF03062 MBOAT, membrane-bound O-acyltransferase family SPYKS030_RS04755 PF00550 Phosphopantetheine attachment site SPYKS030_RS04760 PF04914 DltD protein SPYKS030_RS04765 PF07859 alpha/beta hydrolase fold SPYKS030_RS04765 PF00934 PE family SPYKS030_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS04790 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS04795 PF13416 Bacterial extracellular solute-binding protein SPYKS030_RS04800 PF00356 Bacterial regulatory proteins, lacI family SPYKS030_RS04800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SPYKS030_RS04805 PF02446 4-alpha-glucanotransferase SPYKS030_RS04810 PF00343 Carbohydrate phosphorylase SPYKS030_RS04995 PF00574 Clp protease SPYKS030_RS05080 PF13457 GW (Gly-Tryp) dipeptide domain SPYKS030_RS05080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYKS030_RS05115 PF00334 Nucleoside diphosphate kinase SPYKS030_RS05120 PF03144 Elongation factor Tu domain 2 SPYKS030_RS05120 PF14492 Elongation Factor G, domain II SPYKS030_RS05120 PF06421 GTP-binding protein LepA C-terminus SPYKS030_RS05120 PF00679 Elongation factor G C-terminus SPYKS030_RS05120 PF00009 Elongation factor Tu GTP binding domain SPYKS030_RS05125 PF02370 M protein repeat SPYKS030_RS05125 PF00746 LPXTG cell wall anchor motif SPYKS030_RS05130 PF01641 SelR domain SPYKS030_RS05135 PF03601 Conserved hypothetical protein 698 SPYKS030_RS05145 PF03830 PTS system sorbose subfamily IIB component SPYKS030_RS05150 PF03609 PTS system sorbose-specific iic component SPYKS030_RS05155 PF03613 PTS system mannose/fructose/sorbose family IID component SPYKS030_RS05160 PF06580 Histidine kinase SPYKS030_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS05165 PF12833 Helix-turn-helix domain SPYKS030_RS05165 PF00072 Response regulator receiver domain SPYKS030_RS05175 PF00171 Aldehyde dehydrogenase family SPYKS030_RS05180 PF08459 UvrC Helix-hairpin-helix N-terminal SPYKS030_RS05180 PF02151 UvrB/uvrC motif SPYKS030_RS05180 PF01541 GIY-YIG catalytic domain SPYKS030_RS05185 PF00881 Nitroreductase family SPYKS030_RS05190 PF01546 Peptidase family M20/M25/M40 SPYKS030_RS05195 PF10396 GTP-binding protein TrmE N-terminus SPYKS030_RS05195 PF01926 50S ribosome-binding GTPase SPYKS030_RS05195 PF12631 MnmE helical domain SPYKS030_RS05200 PF00466 Ribosomal protein L10 SPYKS030_RS05205 PF16320 Ribosomal protein L7/L12 dimerisation domain SPYKS030_RS05205 PF00542 Ribosomal protein L7/L12 C-terminal domain SPYKS030_RS05210 PF00768 D-alanyl-D-alanine carboxypeptidase SPYKS030_RS05210 PF07943 Penicillin-binding protein 5, C-terminal domain SPYKS030_RS05220 PF08245 Mur ligase middle domain SPYKS030_RS05220 PF02875 Mur ligase family, glutamate ligase domain SPYKS030_RS05225 PF01227 GTP cyclohydrolase I SPYKS030_RS05230 PF00809 Pterin binding enzyme SPYKS030_RS05235 PF02152 Dihydroneopterin aldolase SPYKS030_RS05240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SPYKS030_RS05245 PF01565 FAD binding domain SPYKS030_RS05245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SPYKS030_RS05250 PF00005 ABC transporter SPYKS030_RS05250 PF08402 TOBE domain SPYKS030_RS05255 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS05265 PF13416 Bacterial extracellular solute-binding protein SPYKS030_RS05270 PF00072 Response regulator receiver domain SPYKS030_RS05275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SPYKS030_RS05275 PF17203 Single cache domain 3 SPYKS030_RS05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS05275 PF00989 PAS fold SPYKS030_RS05280 PF03390 2-hydroxycarboxylate transporter family SPYKS030_RS05285 PF00390 Malic enzyme, N-terminal domain SPYKS030_RS05285 PF03949 Malic enzyme, NAD binding domain SPYKS030_RS05290 PF13823 Alcohol dehydrogenase GroES-associated SPYKS030_RS05290 PF08240 Alcohol dehydrogenase GroES-like domain SPYKS030_RS05290 PF00107 Zinc-binding dehydrogenase SPYKS030_RS05295 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SPYKS030_RS05300 PF00654 Voltage gated chloride channel SPYKS030_RS05310 PF01594 AI-2E family transporter SPYKS030_RS05315 PF04002 RadC-like JAB domain SPYKS030_RS05325 PF02629 CoA binding domain SPYKS030_RS05325 PF06971 Putative DNA-binding protein N-terminus SPYKS030_RS05335 PF00266 Aminotransferase class-V SPYKS030_RS05340 PF14572 Phosphoribosyl synthetase-associated domain SPYKS030_RS05340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPYKS030_RS05350 PF04607 Region found in RelA / SpoT proteins SPYKS030_RS05355 PF01513 ATP-NAD kinase SPYKS030_RS05360 PF01479 S4 domain SPYKS030_RS05360 PF00849 RNA pseudouridylate synthase SPYKS030_RS05365 PF01515 Phosphate acetyl/butaryl transferase SPYKS030_RS05380 PF00005 ABC transporter SPYKS030_RS05380 PF00571 CBS domain SPYKS030_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS05390 PF00478 IMP dehydrogenase / GMP reductase domain SPYKS030_RS05400 PF00156 Phosphoribosyl transferase domain SPYKS030_RS05405 PF00860 Permease family SPYKS030_RS05410 PF02424 ApbE family SPYKS030_RS05415 PF01361 Tautomerase enzyme SPYKS030_RS05420 PF00265 Thymidine kinase SPYKS030_RS05425 PF00472 RF-1 domain SPYKS030_RS05425 PF03462 PCRF domain SPYKS030_RS05430 PF05175 Methyltransferase small domain SPYKS030_RS05445 PF00464 Serine hydroxymethyltransferase SPYKS030_RS05465 PF00005 ABC transporter SPYKS030_RS05465 PF00664 ABC transporter transmembrane region SPYKS030_RS05470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYKS030_RS05470 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS05475 PF00056 lactate/malate dehydrogenase, NAD binding domain SPYKS030_RS05475 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SPYKS030_RS05480 PF00521 DNA gyrase/topoisomerase IV, subunit A SPYKS030_RS05480 PF03989 DNA gyrase C-terminal domain, beta-propeller SPYKS030_RS05485 PF04203 Sortase domain SPYKS030_RS05490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPYKS030_RS05510 PF03006 Haemolysin-III related SPYKS030_RS05520 PF01926 50S ribosome-binding GTPase SPYKS030_RS05525 PF01351 Ribonuclease HII SPYKS030_RS05530 PF18255 DNA processing protein A sterile alpha motif domain SPYKS030_RS05530 PF02481 DNA recombination-mediator protein A SPYKS030_RS05535 PF01131 DNA topoisomerase SPYKS030_RS05535 PF01396 Topoisomerase DNA binding C4 zinc finger SPYKS030_RS05535 PF01751 Toprim domain SPYKS030_RS05540 PF01134 Glucose inhibited division protein A SPYKS030_RS05545 PF00364 Biotin-requiring enzyme SPYKS030_RS05545 PF00682 HMGL-like SPYKS030_RS05545 PF02436 Conserved carboxylase domain SPYKS030_RS05555 PF00364 Biotin-requiring enzyme SPYKS030_RS05560 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SPYKS030_RS05565 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SPYKS030_RS05575 PF03600 Citrate transporter SPYKS030_RS05585 PF00364 Biotin-requiring enzyme SPYKS030_RS05590 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SPYKS030_RS05595 PF06857 Malonate decarboxylase delta subunit (MdcD) SPYKS030_RS05600 PF03328 HpcH/HpaI aldolase/citrate lyase family SPYKS030_RS05605 PF04223 Citrate lyase, alpha subunit (CitF) SPYKS030_RS05610 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SPYKS030_RS05615 PF00364 Biotin-requiring enzyme SPYKS030_RS05615 PF00682 HMGL-like SPYKS030_RS05615 PF02436 Conserved carboxylase domain SPYKS030_RS05620 PF08218 Citrate lyase ligase C-terminal domain SPYKS030_RS05630 PF13495 Phage integrase, N-terminal SAM-like domain SPYKS030_RS05630 PF00589 Phage integrase family SPYKS030_RS05640 PF02881 SRP54-type protein, helical bundle domain SPYKS030_RS05640 PF00448 SRP54-type protein, GTPase domain SPYKS030_RS05640 PF02978 Signal peptide binding domain SPYKS030_RS05645 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SPYKS030_RS05650 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS05650 PF07702 UTRA domain SPYKS030_RS05660 PF02540 NAD synthase SPYKS030_RS05660 PF00958 GMP synthase C terminal domain SPYKS030_RS05660 PF00117 Glutamine amidotransferase class-I SPYKS030_RS05670 PF00005 ABC transporter SPYKS030_RS05670 PF12848 ABC transporter SPYKS030_RS05680 PF08543 Phosphomethylpyrimidine kinase SPYKS030_RS05680 PF02581 Thiamine monophosphate synthase SPYKS030_RS05685 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS05685 PF00155 Aminotransferase class I and II SPYKS030_RS05690 PF03477 ATP cone domain SPYKS030_RS05690 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPYKS030_RS05695 PF13091 PLD-like domain SPYKS030_RS05700 PF01268 Formate--tetrahydrofolate ligase SPYKS030_RS05705 PF03099 Biotin/lipoate A/B protein ligase family SPYKS030_RS05705 PF10437 Bacterial lipoate protein ligase C-terminus SPYKS030_RS05715 PF01661 Macro domain SPYKS030_RS05720 PF01597 Glycine cleavage H-protein SPYKS030_RS05725 PF00296 Luciferase-like monooxygenase SPYKS030_RS05730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SPYKS030_RS05735 PF03099 Biotin/lipoate A/B protein ligase family SPYKS030_RS05740 PF04127 DNA / pantothenate metabolism flavoprotein SPYKS030_RS05740 PF02441 Flavoprotein SPYKS030_RS05745 PF02441 Flavoprotein SPYKS030_RS05750 PF12822 ECF transporter, substrate-specific component SPYKS030_RS05755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPYKS030_RS05755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPYKS030_RS05755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPYKS030_RS05755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPYKS030_RS05760 PF02653 Branched-chain amino acid transport system / permease component SPYKS030_RS05765 PF02653 Branched-chain amino acid transport system / permease component SPYKS030_RS05770 PF00005 ABC transporter SPYKS030_RS05775 PF02608 ABC transporter substrate-binding protein PnrA-like SPYKS030_RS05780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPYKS030_RS05785 PF05175 Methyltransferase small domain SPYKS030_RS05790 PF00485 Phosphoribulokinase / Uridine kinase family SPYKS030_RS05795 PF01649 Ribosomal protein S20 SPYKS030_RS05800 PF00512 His Kinase A (phospho-acceptor) domain SPYKS030_RS05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS05805 PF00072 Response regulator receiver domain SPYKS030_RS05805 PF00486 Transcriptional regulatory protein, C terminal SPYKS030_RS05810 PF11838 ERAP1-like C-terminal domain SPYKS030_RS05810 PF01433 Peptidase family M1 domain SPYKS030_RS05820 PF01895 PhoU domain SPYKS030_RS05825 PF00005 ABC transporter SPYKS030_RS05830 PF00005 ABC transporter SPYKS030_RS05835 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS05845 PF12849 PBP superfamily domain SPYKS030_RS05850 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SPYKS030_RS05850 PF17126 RsmF rRNA methyltransferase first C-terminal domain SPYKS030_RS05850 PF01189 16S rRNA methyltransferase RsmB/F SPYKS030_RS05855 PF00459 Inositol monophosphatase family SPYKS030_RS05860 PF05256 Uncharacterised protein family (UPF0223) SPYKS030_RS05865 PF03960 ArsC family SPYKS030_RS05870 PF01687 Riboflavin kinase SPYKS030_RS05870 PF06574 FAD synthetase SPYKS030_RS05875 PF01509 TruB family pseudouridylate synthase (N terminal domain) SPYKS030_RS05875 PF16198 tRNA pseudouridylate synthase B C-terminal domain SPYKS030_RS05900 PF00005 ABC transporter SPYKS030_RS05900 PF02687 FtsX-like permease family SPYKS030_RS05900 PF12704 MacB-like periplasmic core domain SPYKS030_RS05915 PF03780 Asp23 family, cell envelope-related function SPYKS030_RS05920 PF05532 CsbD-like SPYKS030_RS05925 PF03780 Asp23 family, cell envelope-related function SPYKS030_RS05945 PF13361 UvrD-like helicase C-terminal domain SPYKS030_RS05945 PF00580 UvrD/REP helicase N-terminal domain SPYKS030_RS05950 PF01235 Sodium:alanine symporter family SPYKS030_RS05955 PF16916 Dimerisation domain of Zinc Transporter SPYKS030_RS05955 PF01545 Cation efflux family SPYKS030_RS05960 PF07373 CAMP factor (Cfa) SPYKS030_RS05965 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYKS030_RS05970 PF00005 ABC transporter SPYKS030_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS05980 PF08274 PhnA Zinc-Ribbon SPYKS030_RS05980 PF03831 PhnA domain SPYKS030_RS05985 PF01380 SIS domain SPYKS030_RS05990 PF10502 Signal peptidase, peptidase S26 SPYKS030_RS05995 PF02887 Pyruvate kinase, alpha/beta domain SPYKS030_RS05995 PF00224 Pyruvate kinase, barrel domain SPYKS030_RS06000 PF00365 Phosphofructokinase SPYKS030_RS06005 PF02811 PHP domain SPYKS030_RS06005 PF14579 Helix-hairpin-helix motif SPYKS030_RS06005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPYKS030_RS06005 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPYKS030_RS06005 PF01336 OB-fold nucleic acid binding domain SPYKS030_RS06010 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS06015 PF00005 ABC transporter SPYKS030_RS06040 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYKS030_RS06045 PF13784 Fic/DOC family N-terminal SPYKS030_RS06045 PF02661 Fic/DOC family SPYKS030_RS06050 PF08460 Bacterial SH3 domain SPYKS030_RS06050 PF05257 CHAP domain SPYKS030_RS06050 PF01520 N-acetylmuramoyl-L-alanine amidase SPYKS030_RS06140 PF00574 Clp protease SPYKS030_RS06185 PF00589 Phage integrase family SPYKS030_RS06255 PF00772 DnaB-like helicase N terminal domain SPYKS030_RS06255 PF03796 DnaB-like helicase C terminal domain SPYKS030_RS06310 PF00589 Phage integrase family SPYKS030_RS06315 PF09711 CRISPR-associated protein (Cas_Csn2) SPYKS030_RS06320 PF09827 CRISPR associated protein Cas2 SPYKS030_RS06325 PF01867 CRISPR associated protein Cas1 SPYKS030_RS06330 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 SPYKS030_RS06330 PF13395 HNH endonuclease SPYKS030_RS06330 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 SPYKS030_RS06330 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 SPYKS030_RS06340 PF13344 Haloacid dehalogenase-like hydrolase SPYKS030_RS06350 PF06969 HemN C-terminal domain SPYKS030_RS06350 PF04055 Radical SAM superfamily SPYKS030_RS06360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPYKS030_RS06360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPYKS030_RS06360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPYKS030_RS06360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPYKS030_RS06370 PF02457 DisA bacterial checkpoint controller nucleotide-binding SPYKS030_RS06375 PF08245 Mur ligase middle domain SPYKS030_RS06375 PF08353 Domain of unknown function (DUF1727) SPYKS030_RS06380 PF07685 CobB/CobQ-like glutamine amidotransferase domain SPYKS030_RS06385 PF10437 Bacterial lipoate protein ligase C-terminus SPYKS030_RS06385 PF03099 Biotin/lipoate A/B protein ligase family SPYKS030_RS06390 PF02278 Polysaccharide lyase family 8, super-sandwich domain SPYKS030_RS06390 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SPYKS030_RS06390 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SPYKS030_RS06400 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS06400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYKS030_RS06410 PF00364 Biotin-requiring enzyme SPYKS030_RS06410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SPYKS030_RS06410 PF02817 e3 binding domain SPYKS030_RS06415 PF02779 Transketolase, pyrimidine binding domain SPYKS030_RS06415 PF00364 Biotin-requiring enzyme SPYKS030_RS06415 PF02780 Transketolase, C-terminal domain SPYKS030_RS06420 PF00676 Dehydrogenase E1 component SPYKS030_RS06425 PF00005 ABC transporter SPYKS030_RS06425 PF16326 ABC transporter C-terminal domain SPYKS030_RS06425 PF12848 ABC transporter SPYKS030_RS06435 PF00756 Putative esterase SPYKS030_RS06440 PF17770 Ribonuclease J C-terminal domain SPYKS030_RS06440 PF00753 Metallo-beta-lactamase superfamily SPYKS030_RS06440 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SPYKS030_RS06445 PF00005 ABC transporter SPYKS030_RS06465 PF05670 NFACT protein RNA binding domain SPYKS030_RS06475 PF01594 AI-2E family transporter SPYKS030_RS06480 PF00293 NUDIX domain SPYKS030_RS06485 PF16363 GDP-mannose 4,6 dehydratase SPYKS030_RS06490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SPYKS030_RS06495 PF00483 Nucleotidyl transferase SPYKS030_RS06500 PF01266 FAD dependent oxidoreductase SPYKS030_RS06505 PF01784 NIF3 (NGG1p interacting factor 3) SPYKS030_RS06510 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SPYKS030_RS06515 PF00633 Helix-hairpin-helix motif SPYKS030_RS06515 PF10576 Iron-sulfur binding domain of endonuclease III SPYKS030_RS06515 PF00730 HhH-GPD superfamily base excision DNA repair protein SPYKS030_RS06525 PF00156 Phosphoribosyl transferase domain SPYKS030_RS06530 PF01368 DHH family SPYKS030_RS06530 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SPYKS030_RS06530 PF17768 RecJ OB domain SPYKS030_RS06530 PF02272 DHHA1 domain SPYKS030_RS06535 PF00106 short chain dehydrogenase SPYKS030_RS06540 PF12706 Beta-lactamase superfamily domain SPYKS030_RS06540 PF00753 Metallo-beta-lactamase superfamily SPYKS030_RS06545 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SPYKS030_RS06545 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SPYKS030_RS06550 PF13167 GTP-binding GTPase N-terminal SPYKS030_RS06550 PF01926 50S ribosome-binding GTPase SPYKS030_RS06550 PF16360 GTP-binding GTPase Middle Region SPYKS030_RS06580 PF00581 Rhodanese-like domain SPYKS030_RS06580 PF12368 Rhodanase C-terminal SPYKS030_RS06580 PF17773 UPF0176 acylphosphatase like domain SPYKS030_RS06595 PF00575 S1 RNA binding domain SPYKS030_RS06615 PF01063 Amino-transferase class IV SPYKS030_RS06620 PF03989 DNA gyrase C-terminal domain, beta-propeller SPYKS030_RS06620 PF00521 DNA gyrase/topoisomerase IV, subunit A SPYKS030_RS06625 PF00986 DNA gyrase B subunit, carboxyl terminus SPYKS030_RS06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS06625 PF00204 DNA gyrase B SPYKS030_RS06625 PF01751 Toprim domain SPYKS030_RS06630 PF02660 Glycerol-3-phosphate acyltransferase SPYKS030_RS06635 PF01979 Amidohydrolase family SPYKS030_RS06640 PF03167 Uracil DNA glycosylase superfamily SPYKS030_RS06645 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS06650 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYKS030_RS06655 PF01425 Amidase SPYKS030_RS06660 PF00156 Phosphoribosyl transferase domain SPYKS030_RS06665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPYKS030_RS06675 PF03466 LysR substrate binding domain SPYKS030_RS06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYKS030_RS06685 PF01048 Phosphorylase superfamily SPYKS030_RS06690 PF01048 Phosphorylase superfamily SPYKS030_RS06695 PF03960 ArsC family SPYKS030_RS06700 PF01676 Metalloenzyme superfamily SPYKS030_RS06705 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SPYKS030_RS06710 PF00004 ATPase family associated with various cellular activities (AAA) SPYKS030_RS06710 PF17871 AAA lid domain SPYKS030_RS06710 PF10431 C-terminal, D2-small domain, of ClpB protein SPYKS030_RS06710 PF07724 AAA domain (Cdc48 subfamily) SPYKS030_RS06720 PF01926 50S ribosome-binding GTPase SPYKS030_RS06725 PF06689 ClpX C4-type zinc finger SPYKS030_RS06725 PF10431 C-terminal, D2-small domain, of ClpB protein SPYKS030_RS06725 PF07724 AAA domain (Cdc48 subfamily) SPYKS030_RS06735 PF00186 Dihydrofolate reductase SPYKS030_RS06740 PF00303 Thymidylate synthase SPYKS030_RS06745 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SPYKS030_RS06745 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SPYKS030_RS06750 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SPYKS030_RS06755 PF01070 FMN-dependent dehydrogenase SPYKS030_RS06760 PF00288 GHMP kinases N terminal domain SPYKS030_RS06760 PF08544 GHMP kinases C terminal SPYKS030_RS06770 PF00288 GHMP kinases N terminal domain SPYKS030_RS06770 PF10509 Galactokinase galactose-binding signature SPYKS030_RS06770 PF08544 GHMP kinases C terminal SPYKS030_RS06775 PF00512 His Kinase A (phospho-acceptor) domain SPYKS030_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS06780 PF00072 Response regulator receiver domain SPYKS030_RS06780 PF00486 Transcriptional regulatory protein, C terminal SPYKS030_RS06785 PF04607 Region found in RelA / SpoT proteins SPYKS030_RS06790 PF02872 5'-nucleotidase, C-terminal domain SPYKS030_RS06790 PF00149 Calcineurin-like phosphoesterase SPYKS030_RS06790 PF17936 Bacterial Ig domain SPYKS030_RS06795 PF01327 Polypeptide deformylase SPYKS030_RS06810 PF12848 ABC transporter SPYKS030_RS06810 PF16326 ABC transporter C-terminal domain SPYKS030_RS06810 PF00005 ABC transporter SPYKS030_RS06815 PF13735 tRNA nucleotidyltransferase domain 2 putative SPYKS030_RS06815 PF12627 Probable RNA and SrmB- binding site of polymerase A SPYKS030_RS06815 PF01743 Poly A polymerase head domain SPYKS030_RS06820 PF02645 Uncharacterised protein, DegV family COG1307 SPYKS030_RS06830 PF00334 Nucleoside diphosphate kinase SPYKS030_RS06835 PF09028 Mac 1 SPYKS030_RS06840 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPYKS030_RS06840 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYKS030_RS06845 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPYKS030_RS06845 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYKS030_RS06855 PF01476 LysM domain SPYKS030_RS06855 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYKS030_RS06860 PF01476 LysM domain SPYKS030_RS06860 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYKS030_RS06865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS06865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYKS030_RS06870 PF00294 pfkB family carbohydrate kinase SPYKS030_RS06875 PF00455 DeoR C terminal sensor domain SPYKS030_RS06875 PF08220 DeoR-like helix-turn-helix domain SPYKS030_RS06880 PF08546 Ketopantoate reductase PanE/ApbA C terminal SPYKS030_RS06880 PF02558 Ketopantoate reductase PanE/ApbA SPYKS030_RS06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS06895 PF01746 tRNA (Guanine-1)-methyltransferase SPYKS030_RS06900 PF05239 PRC-barrel domain SPYKS030_RS06900 PF01782 RimM N-terminal domain SPYKS030_RS06930 PF00886 Ribosomal protein S16 SPYKS030_RS06935 PF03009 Glycerophosphoryl diester phosphodiesterase family SPYKS030_RS06940 PF02687 FtsX-like permease family SPYKS030_RS06940 PF12704 MacB-like periplasmic core domain SPYKS030_RS06945 PF00005 ABC transporter SPYKS030_RS06950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SPYKS030_RS06955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPYKS030_RS06955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPYKS030_RS06955 PF02142 MGS-like domain SPYKS030_RS06965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SPYKS030_RS06965 PF00117 Glutamine amidotransferase class-I SPYKS030_RS06970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPYKS030_RS06970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPYKS030_RS06975 PF00860 Permease family SPYKS030_RS06980 PF00156 Phosphoribosyl transferase domain SPYKS030_RS06985 PF01479 S4 domain SPYKS030_RS06985 PF00849 RNA pseudouridylate synthase SPYKS030_RS06990 PF01252 Signal peptidase (SPase) II SPYKS030_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYKS030_RS06995 PF03466 LysR substrate binding domain SPYKS030_RS07005 PF01016 Ribosomal L27 protein SPYKS030_RS07015 PF00829 Ribosomal prokaryotic L21 protein SPYKS030_RS07020 PF09587 Bacterial capsule synthesis protein PGA_cap SPYKS030_RS07025 PF02926 THUMP domain SPYKS030_RS07025 PF02568 Thiamine biosynthesis protein (ThiI) SPYKS030_RS07030 PF00266 Aminotransferase class-V SPYKS030_RS07040 PF08245 Mur ligase middle domain SPYKS030_RS07040 PF02875 Mur ligase family, glutamate ligase domain SPYKS030_RS07045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYKS030_RS07045 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS07050 PF06133 Control of competence regulator ComK, YlbF/YmcA SPYKS030_RS07055 PF01264 Chorismate synthase SPYKS030_RS07060 PF01487 Type I 3-dehydroquinase SPYKS030_RS07065 PF10672 S-adenosylmethionine-dependent methyltransferase SPYKS030_RS07065 PF17785 PUA-like domain SPYKS030_RS07070 PF00884 Sulfatase SPYKS030_RS07075 PF00453 Ribosomal protein L20 SPYKS030_RS07080 PF01632 Ribosomal protein L35 SPYKS030_RS07085 PF05198 Translation initiation factor IF-3, N-terminal domain SPYKS030_RS07085 PF00707 Translation initiation factor IF-3, C-terminal domain SPYKS030_RS07090 PF02224 Cytidylate kinase SPYKS030_RS07110 PF01546 Peptidase family M20/M25/M40 SPYKS030_RS07110 PF07687 Peptidase dimerisation domain SPYKS030_RS07130 PF00535 Glycosyl transferase family 2 SPYKS030_RS07145 PF00535 Glycosyl transferase family 2 SPYKS030_RS07150 PF00005 ABC transporter SPYKS030_RS07160 PF00535 Glycosyl transferase family 2 SPYKS030_RS07160 PF02709 N-terminal domain of galactosyltransferase SPYKS030_RS07170 PF04321 RmlD substrate binding domain SPYKS030_RS07175 PF01883 Iron-sulfur cluster assembly protein SPYKS030_RS07180 PF03979 Sigma-70 factor, region 1.1 SPYKS030_RS07180 PF00140 Sigma-70 factor, region 1.2 SPYKS030_RS07180 PF04542 Sigma-70 region 2 SPYKS030_RS07180 PF04539 Sigma-70 region 3 SPYKS030_RS07180 PF04545 Sigma-70, region 4 SPYKS030_RS07185 PF01807 CHC2 zinc finger SPYKS030_RS07185 PF08275 DNA primase catalytic core, N-terminal domain SPYKS030_RS07185 PF10410 DnaB-helicase binding domain of primase SPYKS030_RS07190 PF01741 Large-conductance mechanosensitive channel, MscL SPYKS030_RS07195 PF01165 Ribosomal protein S21 SPYKS030_RS07200 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYKS030_RS07205 PF13361 UvrD-like helicase C-terminal domain SPYKS030_RS07205 PF12705 PD-(D/E)XK nuclease superfamily SPYKS030_RS07205 PF00580 UvrD/REP helicase N-terminal domain SPYKS030_RS07210 PF12705 PD-(D/E)XK nuclease superfamily SPYKS030_RS07220 PF00005 ABC transporter SPYKS030_RS07225 PF02687 FtsX-like permease family SPYKS030_RS07240 PF03484 tRNA synthetase B5 domain SPYKS030_RS07240 PF03147 Ferredoxin-fold anticodon binding domain SPYKS030_RS07240 PF01588 Putative tRNA binding domain SPYKS030_RS07240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SPYKS030_RS07240 PF03483 B3/4 domain SPYKS030_RS07245 PF01409 tRNA synthetases class II core domain (F) SPYKS030_RS07245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SPYKS030_RS07260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPYKS030_RS07270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SPYKS030_RS07270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SPYKS030_RS07275 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYKS030_RS07275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYKS030_RS07280 PF00231 ATP synthase SPYKS030_RS07285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYKS030_RS07285 PF00306 ATP synthase alpha/beta chain, C terminal domain SPYKS030_RS07285 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYKS030_RS07290 PF00213 ATP synthase delta (OSCP) subunit SPYKS030_RS07295 PF00430 ATP synthase B/B' CF(0) SPYKS030_RS07300 PF00119 ATP synthase A chain SPYKS030_RS07305 PF00137 ATP synthase subunit C SPYKS030_RS07310 PF00781 Diacylglycerol kinase catalytic domain SPYKS030_RS07315 PF12826 Helix-hairpin-helix motif SPYKS030_RS07315 PF00533 BRCA1 C Terminus (BRCT) domain SPYKS030_RS07315 PF01653 NAD-dependent DNA ligase adenylation domain SPYKS030_RS07315 PF03120 NAD-dependent DNA ligase OB-fold domain SPYKS030_RS07315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SPYKS030_RS07320 PF06177 QueT transporter SPYKS030_RS07345 PF00005 ABC transporter SPYKS030_RS07380 PF00113 Enolase, C-terminal TIM barrel domain SPYKS030_RS07380 PF03952 Enolase, N-terminal domain SPYKS030_RS07390 PF06160 Septation ring formation regulator, EzrA SPYKS030_RS07395 PF00986 DNA gyrase B subunit, carboxyl terminus SPYKS030_RS07395 PF00204 DNA gyrase B SPYKS030_RS07395 PF01751 Toprim domain SPYKS030_RS07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS07415 PF01245 Ribosomal protein L19 SPYKS030_RS07420 PF00654 Voltage gated chloride channel SPYKS030_RS07430 PF00258 Flavodoxin SPYKS030_RS07435 PF01368 DHH family SPYKS030_RS07435 PF02272 DHHA1 domain SPYKS030_RS07440 PF01197 Ribosomal protein L31 SPYKS030_RS07445 PF01380 SIS domain SPYKS030_RS07450 PF07702 UTRA domain SPYKS030_RS07450 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS07455 PF01297 Zinc-uptake complex component A periplasmic SPYKS030_RS07455 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SPYKS030_RS07460 PF03577 Peptidase family C69 SPYKS030_RS07465 PF02650 WhiA C-terminal HTH domain SPYKS030_RS07465 PF14527 WhiA LAGLIDADG-like domain SPYKS030_RS07465 PF10298 WhiA N-terminal LAGLIDADG-like domain SPYKS030_RS07470 PF01933 Uncharacterised protein family UPF0052 SPYKS030_RS07475 PF03668 P-loop ATPase protein family SPYKS030_RS07480 PF00152 tRNA synthetases class II (D, K and N) SPYKS030_RS07480 PF01336 OB-fold nucleic acid binding domain SPYKS030_RS07485 PF00155 Aminotransferase class I and II SPYKS030_RS07490 PF00929 Exonuclease SPYKS030_RS07490 PF13307 Helicase C-terminal domain SPYKS030_RS07490 PF04851 Type III restriction enzyme, res subunit SPYKS030_RS07500 PF00753 Metallo-beta-lactamase superfamily SPYKS030_RS07505 PF02687 FtsX-like permease family SPYKS030_RS07505 PF18075 FtsX extracellular domain SPYKS030_RS07510 PF00005 ABC transporter SPYKS030_RS07520 PF08331 Domain of unknown function (DUF1730) SPYKS030_RS07525 PF06874 Firmicute fructose-1,6-bisphosphatase SPYKS030_RS07530 PF13419 Haloacid dehalogenase-like hydrolase SPYKS030_RS07535 PF01081 KDPG and KHG aldolase SPYKS030_RS07560 PF07470 Glycosyl Hydrolase Family 88 SPYKS030_RS07565 PF03830 PTS system sorbose subfamily IIB component SPYKS030_RS07570 PF03609 PTS system sorbose-specific iic component SPYKS030_RS07575 PF03613 PTS system mannose/fructose/sorbose family IID component SPYKS030_RS07585 PF00356 Bacterial regulatory proteins, lacI family SPYKS030_RS07590 PF00690 Cation transporter/ATPase, N-terminus SPYKS030_RS07590 PF00689 Cation transporting ATPase, C-terminus SPYKS030_RS07600 PF01966 HD domain SPYKS030_RS07625 PF00121 Triosephosphate isomerase SPYKS030_RS07630 PF00009 Elongation factor Tu GTP binding domain SPYKS030_RS07630 PF03144 Elongation factor Tu domain 2 SPYKS030_RS07630 PF03143 Elongation factor Tu C-terminal domain SPYKS030_RS07635 PF01098 Cell cycle protein SPYKS030_RS07640 PF00311 Phosphoenolpyruvate carboxylase SPYKS030_RS07645 PF08439 Oligopeptidase F SPYKS030_RS07645 PF01432 Peptidase family M3 SPYKS030_RS07650 PF00255 Glutathione peroxidase SPYKS030_RS07670 PF09515 Thiamine transporter protein (Thia_YuaJ) SPYKS030_RS07690 PF01336 OB-fold nucleic acid binding domain SPYKS030_RS07690 PF00152 tRNA synthetases class II (D, K and N) SPYKS030_RS07695 PF02229 Transcriptional Coactivator p15 (PC4) SPYKS030_RS07700 PF16325 Peptidase family U32 C-terminal domain SPYKS030_RS07700 PF01136 Peptidase family U32 SPYKS030_RS07715 PF12732 YtxH-like protein SPYKS030_RS07725 PF01790 Prolipoprotein diacylglyceryl transferase SPYKS030_RS07730 PF07475 HPr Serine kinase C-terminal domain SPYKS030_RS07730 PF02603 HPr Serine kinase N terminus SPYKS030_RS07740 PF10263 SprT-like family SPYKS030_RS07745 PF16921 Tex protein YqgF-like domain SPYKS030_RS07745 PF09371 Tex-like protein N-terminal domain SPYKS030_RS07745 PF00575 S1 RNA binding domain SPYKS030_RS07745 PF17674 HHH domain SPYKS030_RS07755 PF03773 Predicted permease SPYKS030_RS07760 PF09323 Domain of unknown function (DUF1980) SPYKS030_RS07765 PF00232 Glycosyl hydrolase family 1 SPYKS030_RS07770 PF02378 Phosphotransferase system, EIIC SPYKS030_RS07770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPYKS030_RS07770 PF00367 phosphotransferase system, EIIB SPYKS030_RS07775 PF03123 CAT RNA binding domain SPYKS030_RS07775 PF00874 PRD domain SPYKS030_RS07780 PF07690 Major Facilitator Superfamily SPYKS030_RS07785 PF02881 SRP54-type protein, helical bundle domain SPYKS030_RS07785 PF00448 SRP54-type protein, GTPase domain SPYKS030_RS07860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPYKS030_RS07860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SPYKS030_RS07860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPYKS030_RS07880 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) SPYKS030_RS07900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SPYKS030_RS07900 PF08501 Shikimate dehydrogenase substrate binding domain SPYKS030_RS07910 PF06470 SMC proteins Flexible Hinge Domain SPYKS030_RS07910 PF02463 RecF/RecN/SMC N terminal domain SPYKS030_RS07915 PF14622 Ribonuclease-III-like SPYKS030_RS07915 PF00035 Double-stranded RNA binding motif SPYKS030_RS07920 PF00753 Metallo-beta-lactamase superfamily SPYKS030_RS07925 PF13426 PAS domain SPYKS030_RS07925 PF00512 His Kinase A (phospho-acceptor) domain SPYKS030_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS07925 PF00672 HAMP domain SPYKS030_RS07930 PF00072 Response regulator receiver domain SPYKS030_RS07930 PF00486 Transcriptional regulatory protein, C terminal SPYKS030_RS07945 PF02803 Thiolase, C-terminal domain SPYKS030_RS07945 PF00108 Thiolase, N-terminal domain SPYKS030_RS07965 PF00005 ABC transporter SPYKS030_RS07970 PF02824 TGS domain SPYKS030_RS07970 PF03129 Anticodon binding domain SPYKS030_RS07970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPYKS030_RS07970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPYKS030_RS07975 PF00534 Glycosyl transferases group 1 SPYKS030_RS07975 PF13439 Glycosyltransferase Family 4 SPYKS030_RS07980 PF13439 Glycosyltransferase Family 4 SPYKS030_RS07980 PF00534 Glycosyl transferases group 1 SPYKS030_RS07985 PF00356 Bacterial regulatory proteins, lacI family SPYKS030_RS07990 PF00557 Metallopeptidase family M24 SPYKS030_RS07990 PF01321 Creatinase/Prolidase N-terminal domain SPYKS030_RS07995 PF00881 Nitroreductase family SPYKS030_RS08000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPYKS030_RS08005 PF00535 Glycosyl transferase family 2 SPYKS030_RS08020 PF01470 Pyroglutamyl peptidase SPYKS030_RS08030 PF01668 SmpB protein SPYKS030_RS08035 PF08206 Ribonuclease B OB domain SPYKS030_RS08035 PF00773 RNB domain SPYKS030_RS08035 PF00575 S1 RNA binding domain SPYKS030_RS08035 PF17876 Cold shock domain SPYKS030_RS08045 PF00471 Ribosomal protein L33 SPYKS030_RS08050 PF00083 Sugar (and other) transporter SPYKS030_RS08050 PF07690 Major Facilitator Superfamily SPYKS030_RS08055 PF05872 Bacterial protein of unknown function (DUF853) SPYKS030_RS08060 PF01121 Dephospho-CoA kinase SPYKS030_RS08065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SPYKS030_RS08065 PF06827 Zinc finger found in FPG and IleRS SPYKS030_RS08065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SPYKS030_RS08135 PF13344 Haloacid dehalogenase-like hydrolase SPYKS030_RS08135 PF00293 NUDIX domain SPYKS030_RS08140 PF01926 50S ribosome-binding GTPase SPYKS030_RS08140 PF07650 KH domain SPYKS030_RS08145 PF01219 Prokaryotic diacylglycerol kinase SPYKS030_RS08150 PF02130 Uncharacterized protein family UPF0054 SPYKS030_RS08155 PF03167 Uracil DNA glycosylase superfamily SPYKS030_RS08160 PF02562 PhoH-like protein SPYKS030_RS08165 PF06100 MCRA family SPYKS030_RS08175 PF06855 YozE SAM-like fold SPYKS030_RS08180 PF01625 Peptide methionine sulfoxide reductase SPYKS030_RS08190 PF01765 Ribosome recycling factor SPYKS030_RS08195 PF00696 Amino acid kinase family SPYKS030_RS08200 PF00687 Ribosomal protein L1p/L10e family SPYKS030_RS08205 PF03946 Ribosomal protein L11, N-terminal domain SPYKS030_RS08205 PF00298 Ribosomal protein L11, RNA binding domain SPYKS030_RS08215 PF17854 FtsK alpha domain SPYKS030_RS08215 PF01580 FtsK/SpoIIIE family SPYKS030_RS08215 PF09397 Ftsk gamma domain SPYKS030_RS08220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPYKS030_RS08225 PF00950 ABC 3 transport family SPYKS030_RS08230 PF00005 ABC transporter SPYKS030_RS08235 PF01297 Zinc-uptake complex component A periplasmic SPYKS030_RS08250 PF01048 Phosphorylase superfamily SPYKS030_RS08260 PF00293 NUDIX domain SPYKS030_RS08265 PF00132 Bacterial transferase hexapeptide (six repeats) SPYKS030_RS08265 PF14602 Hexapeptide repeat of succinyl-transferase SPYKS030_RS08265 PF12804 MobA-like NTP transferase domain SPYKS030_RS08270 PF07690 Major Facilitator Superfamily SPYKS030_RS08275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPYKS030_RS08275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPYKS030_RS08305 PF03496 ADP-ribosyltransferase exoenzyme SPYKS030_RS08310 PF02867 Ribonucleotide reductase, barrel domain SPYKS030_RS08310 PF00317 Ribonucleotide reductase, all-alpha domain SPYKS030_RS08310 PF08343 Ribonucleotide reductase N-terminal SPYKS030_RS08315 PF07972 NrdI Flavodoxin like SPYKS030_RS08320 PF00268 Ribonucleotide reductase, small chain SPYKS030_RS08325 PF09334 tRNA synthetases class I (M) SPYKS030_RS08325 PF01588 Putative tRNA binding domain SPYKS030_RS08340 PF00082 Subtilase family SPYKS030_RS08340 PF00746 LPXTG cell wall anchor motif SPYKS030_RS08340 PF06280 Fn3-like domain SPYKS030_RS08340 PF02225 PA domain SPYKS030_RS08345 PF01070 FMN-dependent dehydrogenase SPYKS030_RS08355 PF03372 Endonuclease/Exonuclease/phosphatase family SPYKS030_RS08360 PF03960 ArsC family SPYKS030_RS08365 PF03932 CutC family SPYKS030_RS08375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SPYKS030_RS08380 PF06156 Initiation control protein YabA SPYKS030_RS08390 PF09115 DNA polymerase III, delta subunit, C terminal SPYKS030_RS08395 PF02223 Thymidylate kinase SPYKS030_RS08400 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SPYKS030_RS08410 PF00574 Clp protease SPYKS030_RS08425 PF01943 Polysaccharide biosynthesis protein SPYKS030_RS08425 PF14667 Polysaccharide biosynthesis C-terminal domain SPYKS030_RS08430 PF08245 Mur ligase middle domain SPYKS030_RS08430 PF02875 Mur ligase family, glutamate ligase domain SPYKS030_RS08435 PF00005 ABC transporter SPYKS030_RS08440 PF01497 Periplasmic binding protein SPYKS030_RS08445 PF01032 FecCD transport family SPYKS030_RS08450 PF01032 FecCD transport family SPYKS030_RS08460 PF02833 DHHA2 domain SPYKS030_RS08460 PF01368 DHH family SPYKS030_RS08465 PF04055 Radical SAM superfamily SPYKS030_RS08470 PF03471 Transporter associated domain SPYKS030_RS08470 PF00571 CBS domain SPYKS030_RS08470 PF01595 Cyclin M transmembrane N-terminal domain SPYKS030_RS08475 PF06962 Putative rRNA methylase SPYKS030_RS08480 PF16199 Radical_SAM C-terminal domain SPYKS030_RS08480 PF04055 Radical SAM superfamily SPYKS030_RS08485 PF01569 PAP2 superfamily SPYKS030_RS08490 PF12822 ECF transporter, substrate-specific component SPYKS030_RS08495 PF00588 SpoU rRNA Methylase family SPYKS030_RS08500 PF01809 Putative membrane protein insertion efficiency factor SPYKS030_RS08505 PF01479 S4 domain SPYKS030_RS08505 PF00849 RNA pseudouridylate synthase SPYKS030_RS08510 PF04079 Segregation and condensation complex subunit ScpB SPYKS030_RS08515 PF02616 Segregation and condensation protein ScpA SPYKS030_RS08535 PF01725 Ham1 family SPYKS030_RS08540 PF01177 Asp/Glu/Hydantoin racemase SPYKS030_RS08545 PF03672 Uncharacterised protein family (UPF0154) SPYKS030_RS08550 PF01027 Inhibitor of apoptosis-promoting Bax1 SPYKS030_RS08560 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPYKS030_RS08560 PF00588 SpoU rRNA Methylase family SPYKS030_RS08565 PF00708 Acylphosphatase SPYKS030_RS08570 PF02096 60Kd inner membrane protein SPYKS030_RS08575 PF01272 Transcription elongation factor, GreA/GreB, C-term SPYKS030_RS08575 PF03449 Transcription elongation factor, N-terminal SPYKS030_RS08580 PF02618 YceG-like family SPYKS030_RS08590 PF02875 Mur ligase family, glutamate ligase domain SPYKS030_RS08590 PF01225 Mur ligase family, catalytic domain SPYKS030_RS08590 PF08245 Mur ligase middle domain SPYKS030_RS08600 PF00176 SNF2 family N-terminal domain SPYKS030_RS08600 PF00271 Helicase conserved C-terminal domain SPYKS030_RS08600 PF12419 SNF2 Helicase protein SPYKS030_RS08605 PF01926 50S ribosome-binding GTPase SPYKS030_RS08605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SPYKS030_RS08610 PF01695 IstB-like ATP binding protein SPYKS030_RS08610 PF07319 Primosomal protein DnaI N-terminus SPYKS030_RS08620 PF03477 ATP cone domain SPYKS030_RS08625 PF00512 His Kinase A (phospho-acceptor) domain SPYKS030_RS08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS08625 PF18719 ArlS sensor domain SPYKS030_RS08630 PF00486 Transcriptional regulatory protein, C terminal SPYKS030_RS08630 PF00072 Response regulator receiver domain SPYKS030_RS08640 PF01435 Peptidase family M48 SPYKS030_RS08645 PF04011 LemA family SPYKS030_RS08650 PF02527 rRNA small subunit methyltransferase G SPYKS030_RS08655 PF02386 Cation transport protein SPYKS030_RS08660 PF02254 TrkA-N domain SPYKS030_RS08660 PF02080 TrkA-C domain SPYKS030_RS08665 PF00375 Sodium:dicarboxylate symporter family SPYKS030_RS08670 PF05525 Branched-chain amino acid transport protein SPYKS030_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS08680 PF09383 NIL domain SPYKS030_RS08680 PF00005 ABC transporter SPYKS030_RS08685 PF03180 NLPA lipoprotein SPYKS030_RS08690 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYKS030_RS08695 PF01709 Transcriptional regulator SPYKS030_RS08705 PF05636 HIGH Nucleotidyl Transferase SPYKS030_RS08710 PF13649 Methyltransferase domain SPYKS030_RS08720 PF01966 HD domain SPYKS030_RS08725 PF01467 Cytidylyltransferase-like SPYKS030_RS08730 PF01985 CRS1 / YhbY (CRM) domain SPYKS030_RS08735 PF01926 50S ribosome-binding GTPase SPYKS030_RS08750 PF13808 DDE_Tnp_1-associated SPYKS030_RS08750 PF01609 Transposase DDE domain SPYKS030_RS08790 PF02595 Glycerate kinase family SPYKS030_RS08795 PF12008 Type I restriction and modification enzyme - subunit R C terminal SPYKS030_RS08795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SPYKS030_RS08795 PF18766 SWI2/SNF2 ATPase SPYKS030_RS08805 PF02384 N-6 DNA Methylase SPYKS030_RS08805 PF12161 HsdM N-terminal domain SPYKS030_RS08815 PF00486 Transcriptional regulatory protein, C terminal SPYKS030_RS08815 PF00072 Response regulator receiver domain SPYKS030_RS08830 PF00005 ABC transporter SPYKS030_RS08835 PF00664 ABC transporter transmembrane region SPYKS030_RS08835 PF03412 Peptidase C39 family SPYKS030_RS08835 PF00005 ABC transporter SPYKS030_RS08850 PF04604 Type-A lantibiotic SPYKS030_RS08855 PF00232 Glycosyl hydrolase family 1 SPYKS030_RS08860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS08860 PF02378 Phosphotransferase system, EIIC SPYKS030_RS08865 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPYKS030_RS08870 PF01791 DeoC/LacD family aldolase SPYKS030_RS08875 PF00294 pfkB family carbohydrate kinase SPYKS030_RS08880 PF02502 Ribose/Galactose Isomerase SPYKS030_RS08885 PF02502 Ribose/Galactose Isomerase SPYKS030_RS08890 PF08220 DeoR-like helix-turn-helix domain SPYKS030_RS08890 PF00455 DeoR C terminal sensor domain SPYKS030_RS08915 PF00589 Phage integrase family SPYKS030_RS08915 PF02899 Phage integrase, N-terminal SAM-like domain SPYKS030_RS08925 PF00380 Ribosomal protein S9/S16 SPYKS030_RS08930 PF00572 Ribosomal protein L13 SPYKS030_RS08935 PF01381 Helix-turn-helix SPYKS030_RS08945 PF02645 Uncharacterised protein, DegV family COG1307 SPYKS030_RS08955 PF00588 SpoU rRNA Methylase family SPYKS030_RS08955 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPYKS030_RS08965 PF00636 Ribonuclease III domain SPYKS030_RS08970 PF01406 tRNA synthetases class I (C) catalytic domain SPYKS030_RS08970 PF09190 DALR domain SPYKS030_RS08985 PF06426 Serine acetyltransferase, N-terminal SPYKS030_RS08985 PF00132 Bacterial transferase hexapeptide (six repeats) SPYKS030_RS08995 PF03725 3' exoribonuclease family, domain 2 SPYKS030_RS08995 PF00575 S1 RNA binding domain SPYKS030_RS08995 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SPYKS030_RS08995 PF01138 3' exoribonuclease family, domain 1 SPYKS030_RS08995 PF00013 KH domain SPYKS030_RS09000 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPYKS030_RS09005 PF03611 PTS system sugar-specific permease component SPYKS030_RS09010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS09015 PF05043 Mga helix-turn-helix domain SPYKS030_RS09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYKS030_RS09015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS09015 PF00874 PRD domain SPYKS030_RS09015 PF08279 HTH domain SPYKS030_RS09020 PF00312 Ribosomal protein S15 SPYKS030_RS09035 PF01327 Polypeptide deformylase SPYKS030_RS09040 PF03358 NADPH-dependent FMN reductase SPYKS030_RS09045 PF01047 MarR family SPYKS030_RS09050 PF00929 Exonuclease SPYKS030_RS09050 PF11490 DNA polymerase III polC-type N-terminus II SPYKS030_RS09050 PF14480 DNA polymerase III polC-type N-terminus I SPYKS030_RS09050 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPYKS030_RS09050 PF02811 PHP domain SPYKS030_RS09050 PF14579 Helix-hairpin-helix motif SPYKS030_RS09050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPYKS030_RS09055 PF03129 Anticodon binding domain SPYKS030_RS09055 PF04073 Aminoacyl-tRNA editing domain SPYKS030_RS09055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPYKS030_RS09060 PF13180 PDZ domain SPYKS030_RS09060 PF02163 Peptidase family M50 SPYKS030_RS09070 PF01255 Putative undecaprenyl diphosphate synthase SPYKS030_RS09075 PF02699 Preprotein translocase subunit SPYKS030_RS09085 PF17999 Pullulanase N1-terminal domain SPYKS030_RS09085 PF00128 Alpha amylase, catalytic domain SPYKS030_RS09085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SPYKS030_RS09095 PF00128 Alpha amylase, catalytic domain SPYKS030_RS09100 PF00005 ABC transporter SPYKS030_RS09100 PF03459 TOBE domain SPYKS030_RS09100 PF17912 MalK OB fold domain SPYKS030_RS09105 PF13556 PucR C-terminal helix-turn-helix domain SPYKS030_RS09110 PF02821 Staphylokinase/Streptokinase family SPYKS030_RS09115 PF02580 D-Tyr-tRNA(Tyr) deacylase SPYKS030_RS09120 PF13291 ACT domain SPYKS030_RS09120 PF02824 TGS domain SPYKS030_RS09120 PF04607 Region found in RelA / SpoT proteins SPYKS030_RS09130 PF01609 Transposase DDE domain SPYKS030_RS09130 PF13808 DDE_Tnp_1-associated SPYKS030_RS09135 PF07972 NrdI Flavodoxin like SPYKS030_RS09140 PF03372 Endonuclease/Exonuclease/phosphatase family SPYKS030_RS09145 PF02378 Phosphotransferase system, EIIC SPYKS030_RS09145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPYKS030_RS09145 PF00367 phosphotransferase system, EIIB SPYKS030_RS09150 PF04452 RNA methyltransferase SPYKS030_RS09165 PF04715 Anthranilate synthase component I, N terminal region SPYKS030_RS09165 PF00425 chorismate binding enzyme SPYKS030_RS09170 PF00117 Glutamine amidotransferase class-I SPYKS030_RS09175 PF16193 AAA C-terminal domain SPYKS030_RS09175 PF05496 Holliday junction DNA helicase RuvB P-loop domain SPYKS030_RS09175 PF12002 MgsA AAA+ ATPase C terminal SPYKS030_RS09195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPYKS030_RS09200 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS09205 PF00528 Binding-protein-dependent transport system inner membrane component SPYKS030_RS09210 PF12558 ATP-binding cassette cobalt transporter SPYKS030_RS09210 PF00005 ABC transporter SPYKS030_RS09215 PF00005 ABC transporter SPYKS030_RS09220 PF05532 CsbD-like SPYKS030_RS09230 PF01297 Zinc-uptake complex component A periplasmic SPYKS030_RS09235 PF00082 Subtilase family SPYKS030_RS09235 PF02225 PA domain SPYKS030_RS09235 PF06280 Fn3-like domain SPYKS030_RS09240 PF00746 LPXTG cell wall anchor motif SPYKS030_RS09240 PF04650 YSIRK type signal peptide SPYKS030_RS09245 PF05043 Mga helix-turn-helix domain SPYKS030_RS09245 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SPYKS030_RS09245 PF08270 M protein trans-acting positive regulator (MGA) PRD domain SPYKS030_RS09260 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYKS030_RS09260 PF05257 CHAP domain SPYKS030_RS09265 PF00512 His Kinase A (phospho-acceptor) domain SPYKS030_RS09265 PF13493 Domain of unknown function (DUF4118) SPYKS030_RS09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYKS030_RS09265 PF02702 Osmosensitive K+ channel His kinase sensor domain SPYKS030_RS09270 PF00486 Transcriptional regulatory protein, C terminal SPYKS030_RS09270 PF00072 Response regulator receiver domain SPYKS030_RS09275 PF12704 MacB-like periplasmic core domain SPYKS030_RS09275 PF02687 FtsX-like permease family SPYKS030_RS09280 PF00005 ABC transporter SPYKS030_RS09305 PF13145 PPIC-type PPIASE domain SPYKS030_RS09320 PF13734 Spi protease inhibitor SPYKS030_RS09320 PF01640 Peptidase C10 family SPYKS030_RS09345 PF04608 Phosphatidylglycerophosphatase A SPYKS030_RS09350 PF00465 Iron-containing alcohol dehydrogenase SPYKS030_RS09355 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPYKS030_RS09360 PF02901 Pyruvate formate lyase-like SPYKS030_RS09360 PF01228 Glycine radical SPYKS030_RS09365 PF02378 Phosphotransferase system, EIIC SPYKS030_RS09370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYKS030_RS09375 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPYKS030_RS09380 PF04198 Putative sugar-binding domain SPYKS030_RS09385 PF00455 DeoR C terminal sensor domain SPYKS030_RS09385 PF08220 DeoR-like helix-turn-helix domain SPYKS030_RS09390 PF04055 Radical SAM superfamily SPYKS030_RS09405 PF00471 Ribosomal protein L33 SPYKS030_RS09410 PF00912 Transglycosylase SPYKS030_RS09410 PF00905 Penicillin binding protein transpeptidase domain SPYKS030_RS09425 PF00849 RNA pseudouridylate synthase SPYKS030_RS09425 PF01479 S4 domain SPYKS030_RS09435 PF03577 Peptidase family C69 SPYKS030_RS09450 PF00118 TCP-1/cpn60 chaperonin family SPYKS030_RS09455 PF00166 Chaperonin 10 Kd subunit SPYKS030_RS09460 PF10431 C-terminal, D2-small domain, of ClpB protein SPYKS030_RS09460 PF00004 ATPase family associated with various cellular activities (AAA) SPYKS030_RS09460 PF02861 Clp amino terminal domain, pathogenicity island component SPYKS030_RS09460 PF17871 AAA lid domain SPYKS030_RS09460 PF07724 AAA domain (Cdc48 subfamily) SPYKS030_RS09465 PF17727 CtsR C-terminal dimerization domain SPYKS030_RS09465 PF05848 CtsR N-terminal HTH domain SPYKS030_RS09470 PF00313 'Cold-shock' DNA-binding domain SPYKS030_RS09480 PF00578 AhpC/TSA family SPYKS030_RS09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYKS030_RS09485 PF13192 Thioredoxin domain SPYKS030_RS09490 PF01979 Amidohydrolase family SPYKS030_RS09495 PF17392 Urocanase C-terminal domain SPYKS030_RS09495 PF01175 Urocanase Rossmann-like domain SPYKS030_RS09495 PF17391 Urocanase N-terminal domain SPYKS030_RS09500 PF02971 Formiminotransferase domain SPYKS030_RS09500 PF07837 Formiminotransferase domain, N-terminal subdomain SPYKS030_RS09505 PF04961 Formiminotransferase-cyclodeaminase SPYKS030_RS09510 PF01268 Formate--tetrahydrofolate ligase SPYKS030_RS09520 PF13520 Amino acid permease SPYKS030_RS09525 PF00221 Aromatic amino acid lyase SPYKS030_RS09530 PF00491 Arginase family SPYKS030_RS09540 PF00318 Ribosomal protein S2 SPYKS030_RS09545 PF00889 Elongation factor TS SPYKS030_RS09550 PF05649 Peptidase family M13 SPYKS030_RS09550 PF01431 Peptidase family M13 SPYKS030_RS09555 PF16657 Maltogenic Amylase, C-terminal domain SPYKS030_RS09555 PF00128 Alpha amylase, catalytic domain SPYKS030_RS09560 PF02378 Phosphotransferase system, EIIC SPYKS030_RS09560 PF00367 phosphotransferase system, EIIB SPYKS030_RS09565 PF00392 Bacterial regulatory proteins, gntR family SPYKS030_RS09565 PF07702 UTRA domain SPYKS030_RS09580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPYKS030_RS09585 PF03883 Peroxide stress protein YaaA SPYKS030_RS09600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPYKS030_RS09605 PF03477 ATP cone domain SPYKS030_RS09605 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPYKS030_RS09615 PF06949 Protein of unknown function (DUF1292) SPYKS030_RS09620 PF03652 Holliday junction resolvase SPYKS030_RS09625 PF06135 IreB regulatory phosphoprotein SPYKS030_RS09630 PF03960 ArsC family SPYKS030_RS09635 PF00154 recA bacterial DNA recombination protein SPYKS030_RS09640 PF02464 Competence-damaged protein SPYKS030_RS09640 PF18146 Damage-inducible protein CinA KH domain SPYKS030_RS09640 PF00994 Probable molybdopterin binding domain SPYKS030_RS09645 PF00958 GMP synthase C terminal domain SPYKS030_RS09645 PF13673 Acetyltransferase (GNAT) domain SPYKS030_RS09645 PF13302 Acetyltransferase (GNAT) domain SPYKS030_RS09645 PF03352 Methyladenine glycosylase SPYKS030_RS09645 PF00117 Glutamine amidotransferase class-I SPYKS030_RS09650 PF01330 RuvA N terminal domain SPYKS030_RS09650 PF07499 RuvA, C-terminal domain SPYKS030_RS09660 PF01119 DNA mismatch repair protein, C-terminal domain SPYKS030_RS09660 PF08676 MutL C terminal dimerisation domain SPYKS030_RS09665 PF05190 MutS family domain IV SPYKS030_RS09665 PF00488 MutS domain V SPYKS030_RS09665 PF05192 MutS domain III SPYKS030_RS09665 PF05188 MutS domain II SPYKS030_RS09665 PF01624 MutS domain I SPYKS030_RS09675 PF02863 Arginine repressor, C-terminal domain SPYKS030_RS09675 PF01316 Arginine repressor, DNA binding domain SPYKS030_RS09680 PF05746 DALR anticodon binding domain SPYKS030_RS09680 PF03485 Arginyl tRNA synthetase N terminal domain SPYKS030_RS09680 PF00750 tRNA synthetases class I (R) SPYKS030_RS09690 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYKS030_RS09690 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYKS030_RS09695 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYKS030_RS09695 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYKS030_RS09700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYKS030_RS09700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYKS030_RS09705 PF02938 GAD domain SPYKS030_RS09705 PF00152 tRNA synthetases class II (D, K and N) SPYKS030_RS09705 PF01336 OB-fold nucleic acid binding domain SPYKS030_RS09710 PF13393 Histidyl-tRNA synthetase SPYKS030_RS09710 PF03129 Anticodon binding domain SPYKS030_RS09715 PF01783 Ribosomal L32p protein family SPYKS030_RS09720 PF00471 Ribosomal protein L33 SPYKS030_RS09735 PF01022 Bacterial regulatory protein, arsR family SPYKS030_RS09765 PF00293 NUDIX domain SPYKS030_RS09770 PF03551 Transcriptional regulator PadR-like family SPYKS030_RS09795 PF00163 Ribosomal protein S4/S9 N-terminal domain SPYKS030_RS09795 PF01479 S4 domain SPYKS030_RS09805 PF00772 DnaB-like helicase N terminal domain SPYKS030_RS09805 PF03796 DnaB-like helicase C terminal domain SPYKS030_RS09810 PF03948 Ribosomal protein L9, C-terminal domain SPYKS030_RS09810 PF01281 Ribosomal protein L9, N-terminal domain SPYKS030_RS09815 PF01368 DHH family SPYKS030_RS09815 PF02272 DHHA1 domain SPYKS030_RS09820 PF01134 Glucose inhibited division protein A SPYKS030_RS09820 PF13932 GidA associated domain SPYKS030_RS09835 PF01842 ACT domain SPYKS030_RS09835 PF03315 Serine dehydratase beta chain SPYKS030_RS09840 PF03313 Serine dehydratase alpha chain SPYKS030_RS09845 PF06737 Transglycosylase-like domain SPYKS030_RS09850 PF02361 Cobalt transport protein SPYKS030_RS09855 PF00005 ABC transporter SPYKS030_RS09860 PF00005 ABC transporter SPYKS030_RS09865 PF01066 CDP-alcohol phosphatidyltransferase SPYKS030_RS09875 PF00675 Insulinase (Peptidase family M16) SPYKS030_RS09875 PF05193 Peptidase M16 inactive domain SPYKS030_RS09885 PF00535 Glycosyl transferase family 2 SPYKS030_RS09890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SPYKS030_RS09890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPYKS030_RS09890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPYKS030_RS09900 PF00483 Nucleotidyl transferase SPYKS030_RS09910 PF02463 RecF/RecN/SMC N terminal domain SPYKS030_RS09915 PF06800 Sugar transport protein SPYKS030_RS09920 PF00571 CBS domain SPYKS030_RS09920 PF00478 IMP dehydrogenase / GMP reductase domain SPYKS030_RS09925 PF00579 tRNA synthetases class I (W and Y) SPYKS030_RS09930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYKS030_RS09930 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYKS030_RS09935 PF00005 ABC transporter SPYKS030_RS09935 PF12848 ABC transporter SPYKS030_RS09955 PF13936 Helix-turn-helix domain SPYKS030_RS09965 PF02590 Predicted SPOUT methyltransferase SPYKS030_RS09970 PF13180 PDZ domain SPYKS030_RS09975 PF02195 ParB-like nuclease domain SPYKS030_RS09975 PF17762 HTH domain found in ParB protein