locus-tag class description JYQ80_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JYQ80_RS00005 PF00308 Bacterial dnaA protein JYQ80_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JYQ80_RS00010 PF02767 DNA polymerase III beta subunit, central domain JYQ80_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JYQ80_RS00020 PF01926 50S ribosome-binding GTPase JYQ80_RS00020 PF06071 Protein of unknown function (DUF933) JYQ80_RS00025 PF01195 Peptidyl-tRNA hydrolase JYQ80_RS00030 PF17757 UvrB interaction domain JYQ80_RS00030 PF03461 TRCF domain JYQ80_RS00030 PF00270 DEAD/DEAH box helicase JYQ80_RS00030 PF00271 Helicase conserved C-terminal domain JYQ80_RS00030 PF02559 CarD-like/TRCF domain JYQ80_RS00035 PF01479 S4 domain JYQ80_RS00050 PF01171 PP-loop family JYQ80_RS00055 PF00156 Phosphoribosyl transferase domain JYQ80_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) JYQ80_RS00060 PF17862 AAA+ lid domain JYQ80_RS00060 PF06480 FtsH Extracellular JYQ80_RS00060 PF01434 Peptidase family M41 JYQ80_RS00065 PF13520 Amino acid permease JYQ80_RS00180 PF05257 CHAP domain JYQ80_RS00180 PF01476 LysM domain JYQ80_RS00185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JYQ80_RS00185 PF14572 Phosphoribosyl synthetase-associated domain JYQ80_RS00190 PF11967 Recombination protein O N terminal JYQ80_RS00190 PF02565 Recombination protein O C terminal JYQ80_RS00195 PF02504 Fatty acid synthesis protein JYQ80_RS00200 PF00550 Phosphopantetheine attachment site JYQ80_RS00205 PF01259 SAICAR synthetase JYQ80_RS00210 PF02769 AIR synthase related protein, C-terminal domain JYQ80_RS00210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JYQ80_RS00210 PF00586 AIR synthase related protein, N-terminal domain JYQ80_RS00215 PF00156 Phosphoribosyl transferase domain JYQ80_RS00215 PF13537 Glutamine amidotransferase domain JYQ80_RS00220 PF02769 AIR synthase related protein, C-terminal domain JYQ80_RS00220 PF00586 AIR synthase related protein, N-terminal domain JYQ80_RS00225 PF00551 Formyl transferase JYQ80_RS00230 PF02142 MGS-like domain JYQ80_RS00230 PF01808 AICARFT/IMPCHase bienzyme JYQ80_RS00240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JYQ80_RS00240 PF02843 Phosphoribosylglycinamide synthetase, C domain JYQ80_RS00240 PF02844 Phosphoribosylglycinamide synthetase, N domain JYQ80_RS00245 PF00731 AIR carboxylase JYQ80_RS00250 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JYQ80_RS00250 PF02222 ATP-grasp domain JYQ80_RS00260 PF10397 Adenylosuccinate lyase C-terminus JYQ80_RS00260 PF00206 Lyase JYQ80_RS00275 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYQ80_RS00275 PF17864 RuvB AAA lid domain JYQ80_RS00275 PF05491 RuvB C-terminal winged helix domain JYQ80_RS00280 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYQ80_RS00290 PF01757 Acyltransferase family JYQ80_RS00295 PF00465 Iron-containing alcohol dehydrogenase JYQ80_RS00295 PF00171 Aldehyde dehydrogenase family JYQ80_RS00300 PF08240 Alcohol dehydrogenase GroES-like domain JYQ80_RS00300 PF00107 Zinc-binding dehydrogenase JYQ80_RS00305 PF01554 MatE JYQ80_RS00310 PF00338 Ribosomal protein S10p/S20e JYQ80_RS00315 PF00297 Ribosomal protein L3 JYQ80_RS00320 PF00573 Ribosomal protein L4/L1 family JYQ80_RS00325 PF00276 Ribosomal protein L23 JYQ80_RS00330 PF00181 Ribosomal Proteins L2, RNA binding domain JYQ80_RS00330 PF03947 Ribosomal Proteins L2, C-terminal domain JYQ80_RS00335 PF00203 Ribosomal protein S19 JYQ80_RS00340 PF00237 Ribosomal protein L22p/L17e JYQ80_RS00345 PF00189 Ribosomal protein S3, C-terminal domain JYQ80_RS00345 PF07650 KH domain JYQ80_RS00350 PF00252 Ribosomal protein L16p/L10e JYQ80_RS00355 PF00831 Ribosomal L29 protein JYQ80_RS00360 PF00366 Ribosomal protein S17 JYQ80_RS00365 PF00238 Ribosomal protein L14p/L23e JYQ80_RS00370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JYQ80_RS00370 PF00467 KOW motif JYQ80_RS00375 PF00281 Ribosomal protein L5 JYQ80_RS00375 PF00673 ribosomal L5P family C-terminus JYQ80_RS00380 PF00253 Ribosomal protein S14p/S29e JYQ80_RS00385 PF00410 Ribosomal protein S8 JYQ80_RS00390 PF00347 Ribosomal protein L6 JYQ80_RS00395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JYQ80_RS00400 PF00333 Ribosomal protein S5, N-terminal domain JYQ80_RS00400 PF03719 Ribosomal protein S5, C-terminal domain JYQ80_RS00405 PF00327 Ribosomal protein L30p/L7e JYQ80_RS00410 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JYQ80_RS00415 PF00344 SecY translocase JYQ80_RS00425 PF01176 Translation initiation factor 1A / IF-1 JYQ80_RS00430 PF00444 Ribosomal protein L36 JYQ80_RS00435 PF00416 Ribosomal protein S13/S18 JYQ80_RS00440 PF00411 Ribosomal protein S11 JYQ80_RS00445 PF01000 RNA polymerase Rpb3/RpoA insert domain JYQ80_RS00445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JYQ80_RS00445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JYQ80_RS00450 PF01196 Ribosomal protein L17 JYQ80_RS00540 PF01047 MarR family JYQ80_RS00545 PF00005 ABC transporter JYQ80_RS00550 PF00950 ABC 3 transport family JYQ80_RS00560 PF01479 S4 domain JYQ80_RS00560 PF00579 tRNA synthetases class I (W and Y) JYQ80_RS00565 PF00912 Transglycosylase JYQ80_RS00565 PF00905 Penicillin binding protein transpeptidase domain JYQ80_RS00570 PF04560 RNA polymerase Rpb2, domain 7 JYQ80_RS00570 PF04565 RNA polymerase Rpb2, domain 3 JYQ80_RS00570 PF00562 RNA polymerase Rpb2, domain 6 JYQ80_RS00570 PF04561 RNA polymerase Rpb2, domain 2 JYQ80_RS00570 PF04563 RNA polymerase beta subunit JYQ80_RS00570 PF10385 RNA polymerase beta subunit external 1 domain JYQ80_RS00575 PF04998 RNA polymerase Rpb1, domain 5 JYQ80_RS00575 PF05000 RNA polymerase Rpb1, domain 4 JYQ80_RS00575 PF04983 RNA polymerase Rpb1, domain 3 JYQ80_RS00575 PF00623 RNA polymerase Rpb1, domain 2 JYQ80_RS00575 PF04997 RNA polymerase Rpb1, domain 1 JYQ80_RS00585 PF00437 Type II/IV secretion system protein JYQ80_RS00590 PF00482 Type II secretion system (T2SS), protein F JYQ80_RS00595 PF07963 Prokaryotic N-terminal methylation motif JYQ80_RS00625 PF00871 Acetokinase family JYQ80_RS00635 PF14748 Pyrroline-5-carboxylate reductase dimerisation JYQ80_RS00635 PF03807 NADP oxidoreductase coenzyme F420-dependent JYQ80_RS00640 PF05343 M42 glutamyl aminopeptidase JYQ80_RS00650 PF00085 Thioredoxin JYQ80_RS00655 PF14794 Domain of unknown function (DUF4479) JYQ80_RS00655 PF01588 Putative tRNA binding domain JYQ80_RS00660 PF00436 Single-strand binding protein family JYQ80_RS00665 PF01712 Deoxynucleoside kinase JYQ80_RS00670 PF01207 Dihydrouridine synthase (Dus) JYQ80_RS00675 PF01430 Hsp33 protein JYQ80_RS00685 PF17802 Prealbumin-like fold domain JYQ80_RS00685 PF08341 Thioester domain JYQ80_RS00695 PF12892 Spy0128-like isopeptide containing domain JYQ80_RS00700 PF04203 Sortase domain JYQ80_RS00710 PF03050 Transposase IS66 family JYQ80_RS00710 PF13007 Transposase C of IS166 homeodomain JYQ80_RS00710 PF13005 zinc-finger binding domain of transposase IS66 JYQ80_RS00710 PF13817 IS66 C-terminal element JYQ80_RS00735 PF02667 Short chain fatty acid transporter JYQ80_RS00745 PF00108 Thiolase, N-terminal domain JYQ80_RS00745 PF02803 Thiolase, C-terminal domain JYQ80_RS00750 PF01144 Coenzyme A transferase JYQ80_RS00755 PF01144 Coenzyme A transferase JYQ80_RS00765 PF01042 Endoribonuclease L-PSP JYQ80_RS00780 PF01496 V-type ATPase 116kDa subunit family JYQ80_RS00785 PF00137 ATP synthase subunit C JYQ80_RS00795 PF01992 ATP synthase (C/AC39) subunit JYQ80_RS00800 PF01990 ATP synthase (F/14-kDa) subunit JYQ80_RS00805 PF16886 ATPsynthase alpha/beta subunit N-term extension JYQ80_RS00805 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYQ80_RS00805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYQ80_RS00810 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYQ80_RS00810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYQ80_RS00815 PF01813 ATP synthase subunit D JYQ80_RS00830 PF00709 Adenylosuccinate synthetase JYQ80_RS00835 PF02608 ABC transporter substrate-binding protein PnrA-like JYQ80_RS00840 PF02357 Transcription termination factor nusG JYQ80_RS00840 PF00467 KOW motif JYQ80_RS00855 PF01289 Thiol-activated cytolysin JYQ80_RS00855 PF17440 Thiol-activated cytolysin beta sandwich domain JYQ80_RS00875 PF01053 Cys/Met metabolism PLP-dependent enzyme JYQ80_RS00880 PF09334 tRNA synthetases class I (M) JYQ80_RS00880 PF13603 Leucyl-tRNA synthetase, Domain 2 JYQ80_RS00880 PF08264 Anticodon-binding domain of tRNA JYQ80_RS00880 PF00133 tRNA synthetases class I (I, L, M and V) JYQ80_RS00885 PF03611 PTS system sugar-specific permease component JYQ80_RS00890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS00895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYQ80_RS00900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYQ80_RS00905 PF01261 Xylose isomerase-like TIM barrel JYQ80_RS00910 PF00596 Class II Aldolase and Adducin N-terminal domain JYQ80_RS00925 PF00005 ABC transporter JYQ80_RS00925 PF00571 CBS domain JYQ80_RS00930 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS00935 PF01367 5'-3' exonuclease, C-terminal SAM fold JYQ80_RS00935 PF00476 DNA polymerase family A JYQ80_RS00935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYQ80_RS00945 PF01475 Ferric uptake regulator family JYQ80_RS00955 PF01507 Phosphoadenosine phosphosulfate reductase family JYQ80_RS00955 PF11922 Domain of unknown function (DUF3440) JYQ80_RS00960 PF02195 ParB-like nuclease domain JYQ80_RS00980 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYQ80_RS00980 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JYQ80_RS00995 PF01702 Queuine tRNA-ribosyltransferase JYQ80_RS01005 PF02632 BioY family JYQ80_RS01010 PF12706 Beta-lactamase superfamily domain JYQ80_RS01015 PF14437 MafB19-like deaminase JYQ80_RS01030 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JYQ80_RS01030 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JYQ80_RS01035 PF00342 Phosphoglucose isomerase JYQ80_RS01045 PF13808 DDE_Tnp_1-associated JYQ80_RS01045 PF01609 Transposase DDE domain JYQ80_RS01050 PF01297 Zinc-uptake complex component A periplasmic JYQ80_RS01060 PF05532 CsbD-like JYQ80_RS01065 PF00005 ABC transporter JYQ80_RS01070 PF00005 ABC transporter JYQ80_RS01070 PF12558 ATP-binding cassette cobalt transporter JYQ80_RS01075 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS01080 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS01085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYQ80_RS01095 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JYQ80_RS01095 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JYQ80_RS01120 PF16193 AAA C-terminal domain JYQ80_RS01120 PF12002 MgsA AAA+ ATPase C terminal JYQ80_RS01120 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYQ80_RS01125 PF00117 Glutamine amidotransferase class-I JYQ80_RS01130 PF00425 chorismate binding enzyme JYQ80_RS01130 PF04715 Anthranilate synthase component I, N terminal region JYQ80_RS01145 PF04452 RNA methyltransferase JYQ80_RS01150 PF00367 phosphotransferase system, EIIB JYQ80_RS01150 PF02378 Phosphotransferase system, EIIC JYQ80_RS01150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYQ80_RS01155 PF03372 Endonuclease/Exonuclease/phosphatase family JYQ80_RS01160 PF07972 NrdI Flavodoxin like JYQ80_RS01165 PF00746 LPXTG cell wall anchor motif JYQ80_RS01165 PF02370 M protein repeat JYQ80_RS01170 PF02824 TGS domain JYQ80_RS01170 PF04607 Region found in RelA / SpoT proteins JYQ80_RS01170 PF13291 ACT domain JYQ80_RS01175 PF02580 D-Tyr-tRNA(Tyr) deacylase JYQ80_RS01180 PF02821 Staphylokinase/Streptokinase family JYQ80_RS01185 PF13556 PucR C-terminal helix-turn-helix domain JYQ80_RS01190 PF00005 ABC transporter JYQ80_RS01190 PF03459 TOBE domain JYQ80_RS01190 PF17912 MalK OB fold domain JYQ80_RS01195 PF00128 Alpha amylase, catalytic domain JYQ80_RS01200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYQ80_RS01200 PF00128 Alpha amylase, catalytic domain JYQ80_RS01200 PF17999 Pullulanase N1-terminal domain JYQ80_RS01210 PF02699 Preprotein translocase subunit JYQ80_RS01215 PF01255 Putative undecaprenyl diphosphate synthase JYQ80_RS01225 PF02163 Peptidase family M50 JYQ80_RS01225 PF13180 PDZ domain JYQ80_RS01230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYQ80_RS01230 PF03129 Anticodon binding domain JYQ80_RS01230 PF04073 Aminoacyl-tRNA editing domain JYQ80_RS01235 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYQ80_RS01235 PF14480 DNA polymerase III polC-type N-terminus I JYQ80_RS01235 PF11490 DNA polymerase III polC-type N-terminus II JYQ80_RS01235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYQ80_RS01235 PF14579 Helix-hairpin-helix motif JYQ80_RS01235 PF02811 PHP domain JYQ80_RS01235 PF00929 Exonuclease JYQ80_RS01240 PF01047 MarR family JYQ80_RS01245 PF03358 NADPH-dependent FMN reductase JYQ80_RS01250 PF01327 Polypeptide deformylase JYQ80_RS01265 PF00312 Ribosomal protein S15 JYQ80_RS01270 PF08279 HTH domain JYQ80_RS01270 PF05043 Mga helix-turn-helix domain JYQ80_RS01270 PF00874 PRD domain JYQ80_RS01270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS01270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYQ80_RS01275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS01285 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYQ80_RS01290 PF00013 KH domain JYQ80_RS01290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JYQ80_RS01290 PF01138 3' exoribonuclease family, domain 1 JYQ80_RS01290 PF03725 3' exoribonuclease family, domain 2 JYQ80_RS01290 PF00575 S1 RNA binding domain JYQ80_RS01300 PF00132 Bacterial transferase hexapeptide (six repeats) JYQ80_RS01300 PF06426 Serine acetyltransferase, N-terminal JYQ80_RS01310 PF09190 DALR domain JYQ80_RS01310 PF01406 tRNA synthetases class I (C) catalytic domain JYQ80_RS01315 PF00636 Ribonuclease III domain JYQ80_RS01325 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYQ80_RS01325 PF00588 SpoU rRNA Methylase family JYQ80_RS01335 PF02645 Uncharacterised protein, DegV family COG1307 JYQ80_RS01345 PF01381 Helix-turn-helix JYQ80_RS01350 PF00572 Ribosomal protein L13 JYQ80_RS01355 PF00380 Ribosomal protein S9/S16 JYQ80_RS01360 PF00589 Phage integrase family JYQ80_RS01360 PF02899 Phage integrase, N-terminal SAM-like domain JYQ80_RS01380 PF00455 DeoR C terminal sensor domain JYQ80_RS01380 PF08220 DeoR-like helix-turn-helix domain JYQ80_RS01385 PF02502 Ribose/Galactose Isomerase JYQ80_RS01390 PF02502 Ribose/Galactose Isomerase JYQ80_RS01395 PF00294 pfkB family carbohydrate kinase JYQ80_RS01400 PF01791 DeoC/LacD family aldolase JYQ80_RS01405 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYQ80_RS01410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS01410 PF02378 Phosphotransferase system, EIIC JYQ80_RS01415 PF00232 Glycosyl hydrolase family 1 JYQ80_RS01420 PF04604 Type-A lantibiotic JYQ80_RS01430 PF00005 ABC transporter JYQ80_RS01430 PF03412 Peptidase C39 family JYQ80_RS01430 PF00664 ABC transporter transmembrane region JYQ80_RS01435 PF00005 ABC transporter JYQ80_RS01440 PF02687 FtsX-like permease family JYQ80_RS01450 PF00072 Response regulator receiver domain JYQ80_RS01450 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS01455 PF12161 HsdM N-terminal domain JYQ80_RS01455 PF02384 N-6 DNA Methylase JYQ80_RS01465 PF12008 Type I restriction and modification enzyme - subunit R C terminal JYQ80_RS01465 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JYQ80_RS01465 PF18766 SWI2/SNF2 ATPase JYQ80_RS01470 PF02595 Glycerate kinase family JYQ80_RS01510 PF13808 DDE_Tnp_1-associated JYQ80_RS01510 PF01609 Transposase DDE domain JYQ80_RS01520 PF01926 50S ribosome-binding GTPase JYQ80_RS01525 PF01985 CRS1 / YhbY (CRM) domain JYQ80_RS01530 PF01467 Cytidylyltransferase-like JYQ80_RS01535 PF01966 HD domain JYQ80_RS01545 PF13649 Methyltransferase domain JYQ80_RS01550 PF05636 HIGH Nucleotidyl Transferase JYQ80_RS01555 PF01709 Transcriptional regulator JYQ80_RS01560 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYQ80_RS01565 PF03180 NLPA lipoprotein JYQ80_RS01570 PF00005 ABC transporter JYQ80_RS01570 PF09383 NIL domain JYQ80_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS01580 PF05525 Branched-chain amino acid transport protein JYQ80_RS01585 PF00375 Sodium:dicarboxylate symporter family JYQ80_RS01590 PF02080 TrkA-C domain JYQ80_RS01590 PF02254 TrkA-N domain JYQ80_RS01595 PF02386 Cation transport protein JYQ80_RS01600 PF02527 rRNA small subunit methyltransferase G JYQ80_RS01605 PF04011 LemA family JYQ80_RS01610 PF01435 Peptidase family M48 JYQ80_RS01620 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS01620 PF00072 Response regulator receiver domain JYQ80_RS01625 PF18719 ArlS sensor domain JYQ80_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS01625 PF00512 His Kinase A (phospho-acceptor) domain JYQ80_RS01630 PF03477 ATP cone domain JYQ80_RS01640 PF01695 IstB-like ATP binding protein JYQ80_RS01640 PF07319 Primosomal protein DnaI N-terminus JYQ80_RS01645 PF01926 50S ribosome-binding GTPase JYQ80_RS01645 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JYQ80_RS01650 PF00271 Helicase conserved C-terminal domain JYQ80_RS01650 PF12419 SNF2 Helicase protein JYQ80_RS01650 PF00176 SNF2 family N-terminal domain JYQ80_RS01660 PF08245 Mur ligase middle domain JYQ80_RS01660 PF02875 Mur ligase family, glutamate ligase domain JYQ80_RS01660 PF01225 Mur ligase family, catalytic domain JYQ80_RS01670 PF02618 YceG-like family JYQ80_RS01675 PF03449 Transcription elongation factor, N-terminal JYQ80_RS01675 PF01272 Transcription elongation factor, GreA/GreB, C-term JYQ80_RS01680 PF02096 60Kd inner membrane protein JYQ80_RS01685 PF00708 Acylphosphatase JYQ80_RS01690 PF01609 Transposase DDE domain JYQ80_RS01690 PF13808 DDE_Tnp_1-associated JYQ80_RS01695 PF00588 SpoU rRNA Methylase family JYQ80_RS01695 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYQ80_RS01705 PF01027 Inhibitor of apoptosis-promoting Bax1 JYQ80_RS01710 PF03672 Uncharacterised protein family (UPF0154) JYQ80_RS01715 PF01177 Asp/Glu/Hydantoin racemase JYQ80_RS01720 PF01725 Ham1 family JYQ80_RS01735 PF00589 Phage integrase family JYQ80_RS01740 PF02616 Segregation and condensation protein ScpA JYQ80_RS01745 PF04079 Segregation and condensation complex subunit ScpB JYQ80_RS01750 PF00849 RNA pseudouridylate synthase JYQ80_RS01750 PF01479 S4 domain JYQ80_RS01755 PF01809 Putative membrane protein insertion efficiency factor JYQ80_RS01760 PF00588 SpoU rRNA Methylase family JYQ80_RS01765 PF12822 ECF transporter, substrate-specific component JYQ80_RS01770 PF01569 PAP2 superfamily JYQ80_RS01775 PF16199 Radical_SAM C-terminal domain JYQ80_RS01775 PF04055 Radical SAM superfamily JYQ80_RS01780 PF06962 Putative rRNA methylase JYQ80_RS01785 PF01595 Cyclin M transmembrane N-terminal domain JYQ80_RS01785 PF00571 CBS domain JYQ80_RS01785 PF03471 Transporter associated domain JYQ80_RS01790 PF04055 Radical SAM superfamily JYQ80_RS01795 PF01368 DHH family JYQ80_RS01795 PF02833 DHHA2 domain JYQ80_RS01805 PF01032 FecCD transport family JYQ80_RS01810 PF01032 FecCD transport family JYQ80_RS01815 PF01497 Periplasmic binding protein JYQ80_RS01820 PF00005 ABC transporter JYQ80_RS01825 PF08245 Mur ligase middle domain JYQ80_RS01825 PF02875 Mur ligase family, glutamate ligase domain JYQ80_RS01830 PF01943 Polysaccharide biosynthesis protein JYQ80_RS01830 PF14667 Polysaccharide biosynthesis C-terminal domain JYQ80_RS01840 PF00574 Clp protease JYQ80_RS01845 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JYQ80_RS01850 PF02223 Thymidylate kinase JYQ80_RS01855 PF09115 DNA polymerase III, delta subunit, C terminal JYQ80_RS01865 PF06156 Initiation control protein YabA JYQ80_RS01870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYQ80_RS01880 PF03932 CutC family JYQ80_RS01885 PF03960 ArsC family JYQ80_RS01890 PF03372 Endonuclease/Exonuclease/phosphatase family JYQ80_RS01895 PF01070 FMN-dependent dehydrogenase JYQ80_RS01900 PF06280 Fn3-like domain JYQ80_RS01900 PF00746 LPXTG cell wall anchor motif JYQ80_RS01900 PF00082 Subtilase family JYQ80_RS01900 PF02225 PA domain JYQ80_RS01910 PF01588 Putative tRNA binding domain JYQ80_RS01910 PF09334 tRNA synthetases class I (M) JYQ80_RS01915 PF00268 Ribonucleotide reductase, small chain JYQ80_RS01920 PF07972 NrdI Flavodoxin like JYQ80_RS01925 PF02867 Ribonucleotide reductase, barrel domain JYQ80_RS01925 PF00317 Ribonucleotide reductase, all-alpha domain JYQ80_RS01925 PF08343 Ribonucleotide reductase N-terminal JYQ80_RS01930 PF03496 ADP-ribosyltransferase exoenzyme JYQ80_RS01955 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JYQ80_RS01955 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JYQ80_RS01975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYQ80_RS01975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYQ80_RS01980 PF07690 Major Facilitator Superfamily JYQ80_RS01985 PF00132 Bacterial transferase hexapeptide (six repeats) JYQ80_RS01985 PF12804 MobA-like NTP transferase domain JYQ80_RS01990 PF00293 NUDIX domain JYQ80_RS02000 PF01048 Phosphorylase superfamily JYQ80_RS02015 PF01297 Zinc-uptake complex component A periplasmic JYQ80_RS02020 PF00005 ABC transporter JYQ80_RS02025 PF00950 ABC 3 transport family JYQ80_RS02030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYQ80_RS02035 PF09397 Ftsk gamma domain JYQ80_RS02035 PF17854 FtsK alpha domain JYQ80_RS02035 PF01580 FtsK/SpoIIIE family JYQ80_RS02045 PF03946 Ribosomal protein L11, N-terminal domain JYQ80_RS02045 PF00298 Ribosomal protein L11, RNA binding domain JYQ80_RS02050 PF00687 Ribosomal protein L1p/L10e family JYQ80_RS02055 PF00696 Amino acid kinase family JYQ80_RS02060 PF01765 Ribosome recycling factor JYQ80_RS02070 PF01625 Peptide methionine sulfoxide reductase JYQ80_RS02075 PF06855 YozE SAM-like fold JYQ80_RS02085 PF06100 MCRA family JYQ80_RS02090 PF02562 PhoH-like protein JYQ80_RS02095 PF03167 Uracil DNA glycosylase superfamily JYQ80_RS02100 PF02130 Uncharacterized protein family UPF0054 JYQ80_RS02105 PF01219 Prokaryotic diacylglycerol kinase JYQ80_RS02110 PF07650 KH domain JYQ80_RS02110 PF01926 50S ribosome-binding GTPase JYQ80_RS02115 PF00293 NUDIX domain JYQ80_RS02115 PF13344 Haloacid dehalogenase-like hydrolase JYQ80_RS02175 PF06827 Zinc finger found in FPG and IleRS JYQ80_RS02175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYQ80_RS02175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYQ80_RS02180 PF01121 Dephospho-CoA kinase JYQ80_RS02185 PF05872 Bacterial protein of unknown function (DUF853) JYQ80_RS02190 PF07690 Major Facilitator Superfamily JYQ80_RS02190 PF00083 Sugar (and other) transporter JYQ80_RS02195 PF00471 Ribosomal protein L33 JYQ80_RS02205 PF00773 RNB domain JYQ80_RS02205 PF08206 Ribonuclease B OB domain JYQ80_RS02205 PF00575 S1 RNA binding domain JYQ80_RS02205 PF17876 Cold shock domain JYQ80_RS02210 PF01668 SmpB protein JYQ80_RS02220 PF01470 Pyroglutamyl peptidase JYQ80_RS02235 PF00535 Glycosyl transferase family 2 JYQ80_RS02240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYQ80_RS02245 PF00881 Nitroreductase family JYQ80_RS02250 PF01321 Creatinase/Prolidase N-terminal domain JYQ80_RS02250 PF00557 Metallopeptidase family M24 JYQ80_RS02255 PF00356 Bacterial regulatory proteins, lacI family JYQ80_RS02260 PF13439 Glycosyltransferase Family 4 JYQ80_RS02260 PF00534 Glycosyl transferases group 1 JYQ80_RS02265 PF13439 Glycosyltransferase Family 4 JYQ80_RS02265 PF00534 Glycosyl transferases group 1 JYQ80_RS02270 PF03129 Anticodon binding domain JYQ80_RS02270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYQ80_RS02270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYQ80_RS02270 PF02824 TGS domain JYQ80_RS02275 PF00005 ABC transporter JYQ80_RS02295 PF02803 Thiolase, C-terminal domain JYQ80_RS02295 PF00108 Thiolase, N-terminal domain JYQ80_RS02310 PF00072 Response regulator receiver domain JYQ80_RS02310 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS02315 PF13426 PAS domain JYQ80_RS02315 PF00512 His Kinase A (phospho-acceptor) domain JYQ80_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS02315 PF00672 HAMP domain JYQ80_RS02320 PF00753 Metallo-beta-lactamase superfamily JYQ80_RS02325 PF00035 Double-stranded RNA binding motif JYQ80_RS02325 PF14622 Ribonuclease-III-like JYQ80_RS02330 PF02463 RecF/RecN/SMC N terminal domain JYQ80_RS02330 PF06470 SMC proteins Flexible Hinge Domain JYQ80_RS02345 PF08501 Shikimate dehydrogenase substrate binding domain JYQ80_RS02345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYQ80_RS02365 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) JYQ80_RS02380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYQ80_RS02380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYQ80_RS02380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYQ80_RS02435 PF04860 Phage portal protein JYQ80_RS02450 PF01336 OB-fold nucleic acid binding domain JYQ80_RS02450 PF00152 tRNA synthetases class II (D, K and N) JYQ80_RS02455 PF02655 ATP-grasp domain JYQ80_RS02455 PF00206 Lyase JYQ80_RS02460 PF17676 LD-carboxypeptidase C-terminal domain JYQ80_RS02460 PF02016 LD-carboxypeptidase N-terminal domain JYQ80_RS02495 PF00448 SRP54-type protein, GTPase domain JYQ80_RS02495 PF02881 SRP54-type protein, helical bundle domain JYQ80_RS02500 PF07690 Major Facilitator Superfamily JYQ80_RS02505 PF00874 PRD domain JYQ80_RS02505 PF03123 CAT RNA binding domain JYQ80_RS02510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYQ80_RS02510 PF00367 phosphotransferase system, EIIB JYQ80_RS02510 PF02378 Phosphotransferase system, EIIC JYQ80_RS02515 PF00232 Glycosyl hydrolase family 1 JYQ80_RS02520 PF09323 Domain of unknown function (DUF1980) JYQ80_RS02525 PF03773 Predicted permease JYQ80_RS02535 PF09371 Tex-like protein N-terminal domain JYQ80_RS02535 PF16921 Tex protein YqgF-like domain JYQ80_RS02535 PF00575 S1 RNA binding domain JYQ80_RS02535 PF17674 HHH domain JYQ80_RS02540 PF10263 SprT-like family JYQ80_RS02550 PF07475 HPr Serine kinase C-terminal domain JYQ80_RS02550 PF02603 HPr Serine kinase N terminus JYQ80_RS02555 PF01790 Prolipoprotein diacylglyceryl transferase JYQ80_RS02565 PF12732 YtxH-like protein JYQ80_RS02580 PF16325 Peptidase family U32 C-terminal domain JYQ80_RS02580 PF01136 Peptidase family U32 JYQ80_RS02585 PF02229 Transcriptional Coactivator p15 (PC4) JYQ80_RS02595 PF00152 tRNA synthetases class II (D, K and N) JYQ80_RS02595 PF01336 OB-fold nucleic acid binding domain JYQ80_RS02615 PF09515 Thiamine transporter protein (Thia_YuaJ) JYQ80_RS02635 PF00255 Glutathione peroxidase JYQ80_RS02640 PF01432 Peptidase family M3 JYQ80_RS02640 PF08439 Oligopeptidase F JYQ80_RS02645 PF00311 Phosphoenolpyruvate carboxylase JYQ80_RS02650 PF01098 Cell cycle protein JYQ80_RS02655 PF00009 Elongation factor Tu GTP binding domain JYQ80_RS02655 PF03144 Elongation factor Tu domain 2 JYQ80_RS02655 PF03143 Elongation factor Tu C-terminal domain JYQ80_RS02660 PF00121 Triosephosphate isomerase JYQ80_RS02680 PF01966 HD domain JYQ80_RS02690 PF00689 Cation transporting ATPase, C-terminus JYQ80_RS02690 PF00690 Cation transporter/ATPase, N-terminus JYQ80_RS02695 PF00356 Bacterial regulatory proteins, lacI family JYQ80_RS02705 PF03613 PTS system mannose/fructose/sorbose family IID component JYQ80_RS02710 PF03609 PTS system sorbose-specific iic component JYQ80_RS02715 PF03830 PTS system sorbose subfamily IIB component JYQ80_RS02720 PF07470 Glycosyl Hydrolase Family 88 JYQ80_RS02745 PF01081 KDPG and KHG aldolase JYQ80_RS02750 PF13419 Haloacid dehalogenase-like hydrolase JYQ80_RS02755 PF08331 Domain of unknown function (DUF1730) JYQ80_RS02765 PF00005 ABC transporter JYQ80_RS02770 PF02687 FtsX-like permease family JYQ80_RS02770 PF18075 FtsX extracellular domain JYQ80_RS02775 PF00753 Metallo-beta-lactamase superfamily JYQ80_RS02785 PF00929 Exonuclease JYQ80_RS02785 PF04851 Type III restriction enzyme, res subunit JYQ80_RS02785 PF13307 Helicase C-terminal domain JYQ80_RS02790 PF00155 Aminotransferase class I and II JYQ80_RS02795 PF00152 tRNA synthetases class II (D, K and N) JYQ80_RS02795 PF01336 OB-fold nucleic acid binding domain JYQ80_RS02800 PF03668 P-loop ATPase protein family JYQ80_RS02805 PF01933 Uncharacterised protein family UPF0052 JYQ80_RS02810 PF10298 WhiA N-terminal LAGLIDADG-like domain JYQ80_RS02810 PF14527 WhiA LAGLIDADG-like domain JYQ80_RS02810 PF02650 WhiA C-terminal HTH domain JYQ80_RS02815 PF03577 Peptidase family C69 JYQ80_RS02820 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JYQ80_RS02820 PF01297 Zinc-uptake complex component A periplasmic JYQ80_RS02825 PF07702 UTRA domain JYQ80_RS02825 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS02830 PF01380 SIS domain JYQ80_RS02835 PF01197 Ribosomal protein L31 JYQ80_RS02840 PF01368 DHH family JYQ80_RS02840 PF02272 DHHA1 domain JYQ80_RS02845 PF00258 Flavodoxin JYQ80_RS02855 PF00654 Voltage gated chloride channel JYQ80_RS02860 PF01245 Ribosomal protein L19 JYQ80_RS02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS02880 PF00986 DNA gyrase B subunit, carboxyl terminus JYQ80_RS02880 PF00204 DNA gyrase B JYQ80_RS02880 PF01751 Toprim domain JYQ80_RS02885 PF06160 Septation ring formation regulator, EzrA JYQ80_RS02895 PF00113 Enolase, C-terminal TIM barrel domain JYQ80_RS02895 PF03952 Enolase, N-terminal domain JYQ80_RS02950 PF00005 ABC transporter JYQ80_RS02970 PF06177 QueT transporter JYQ80_RS02975 PF12826 Helix-hairpin-helix motif JYQ80_RS02975 PF00533 BRCA1 C Terminus (BRCT) domain JYQ80_RS02975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JYQ80_RS02975 PF01653 NAD-dependent DNA ligase adenylation domain JYQ80_RS02975 PF03120 NAD-dependent DNA ligase OB-fold domain JYQ80_RS02980 PF00781 Diacylglycerol kinase catalytic domain JYQ80_RS02985 PF00137 ATP synthase subunit C JYQ80_RS02990 PF00119 ATP synthase A chain JYQ80_RS02995 PF00430 ATP synthase B/B' CF(0) JYQ80_RS03000 PF00213 ATP synthase delta (OSCP) subunit JYQ80_RS03005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYQ80_RS03005 PF00306 ATP synthase alpha/beta chain, C terminal domain JYQ80_RS03005 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYQ80_RS03010 PF00231 ATP synthase JYQ80_RS03015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYQ80_RS03015 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYQ80_RS03020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JYQ80_RS03020 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JYQ80_RS03030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYQ80_RS03040 PF01223 DNA/RNA non-specific endonuclease JYQ80_RS03045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JYQ80_RS03045 PF01409 tRNA synthetases class II core domain (F) JYQ80_RS03050 PF03147 Ferredoxin-fold anticodon binding domain JYQ80_RS03050 PF03484 tRNA synthetase B5 domain JYQ80_RS03050 PF01588 Putative tRNA binding domain JYQ80_RS03050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JYQ80_RS03050 PF03483 B3/4 domain JYQ80_RS03065 PF02687 FtsX-like permease family JYQ80_RS03070 PF00005 ABC transporter JYQ80_RS03075 PF04228 Putative neutral zinc metallopeptidase JYQ80_RS03080 PF12705 PD-(D/E)XK nuclease superfamily JYQ80_RS03085 PF00580 UvrD/REP helicase N-terminal domain JYQ80_RS03085 PF13361 UvrD-like helicase C-terminal domain JYQ80_RS03085 PF12705 PD-(D/E)XK nuclease superfamily JYQ80_RS03090 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYQ80_RS03095 PF01165 Ribosomal protein S21 JYQ80_RS03100 PF01741 Large-conductance mechanosensitive channel, MscL JYQ80_RS03105 PF08275 DNA primase catalytic core, N-terminal domain JYQ80_RS03105 PF01807 CHC2 zinc finger JYQ80_RS03105 PF10410 DnaB-helicase binding domain of primase JYQ80_RS03110 PF03979 Sigma-70 factor, region 1.1 JYQ80_RS03110 PF04542 Sigma-70 region 2 JYQ80_RS03110 PF04539 Sigma-70 region 3 JYQ80_RS03110 PF04545 Sigma-70, region 4 JYQ80_RS03110 PF00140 Sigma-70 factor, region 1.2 JYQ80_RS03115 PF01883 Iron-sulfur cluster assembly protein JYQ80_RS03120 PF04321 RmlD substrate binding domain JYQ80_RS03130 PF02709 N-terminal domain of galactosyltransferase JYQ80_RS03130 PF00535 Glycosyl transferase family 2 JYQ80_RS03140 PF00005 ABC transporter JYQ80_RS03145 PF00535 Glycosyl transferase family 2 JYQ80_RS03160 PF00535 Glycosyl transferase family 2 JYQ80_RS03180 PF07687 Peptidase dimerisation domain JYQ80_RS03180 PF01546 Peptidase family M20/M25/M40 JYQ80_RS03200 PF02224 Cytidylate kinase JYQ80_RS03205 PF00707 Translation initiation factor IF-3, C-terminal domain JYQ80_RS03205 PF05198 Translation initiation factor IF-3, N-terminal domain JYQ80_RS03210 PF01632 Ribosomal protein L35 JYQ80_RS03215 PF00453 Ribosomal protein L20 JYQ80_RS03220 PF00884 Sulfatase JYQ80_RS03225 PF10672 S-adenosylmethionine-dependent methyltransferase JYQ80_RS03225 PF17785 PUA-like domain JYQ80_RS03230 PF01487 Type I 3-dehydroquinase JYQ80_RS03235 PF01264 Chorismate synthase JYQ80_RS03240 PF06133 Control of competence regulator ComK, YlbF/YmcA JYQ80_RS03245 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS03245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYQ80_RS03250 PF08245 Mur ligase middle domain JYQ80_RS03250 PF02875 Mur ligase family, glutamate ligase domain JYQ80_RS03260 PF00266 Aminotransferase class-V JYQ80_RS03265 PF02926 THUMP domain JYQ80_RS03265 PF02568 Thiamine biosynthesis protein (ThiI) JYQ80_RS03270 PF09587 Bacterial capsule synthesis protein PGA_cap JYQ80_RS03275 PF00829 Ribosomal prokaryotic L21 protein JYQ80_RS03285 PF01016 Ribosomal L27 protein JYQ80_RS03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYQ80_RS03290 PF03466 LysR substrate binding domain JYQ80_RS03295 PF01252 Signal peptidase (SPase) II JYQ80_RS03300 PF01479 S4 domain JYQ80_RS03300 PF00849 RNA pseudouridylate synthase JYQ80_RS03305 PF00156 Phosphoribosyl transferase domain JYQ80_RS03310 PF00860 Permease family JYQ80_RS03315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYQ80_RS03315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYQ80_RS03320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JYQ80_RS03320 PF00117 Glutamine amidotransferase class-I JYQ80_RS03325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYQ80_RS03325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JYQ80_RS03325 PF02142 MGS-like domain JYQ80_RS03330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYQ80_RS03335 PF00005 ABC transporter JYQ80_RS03340 PF12704 MacB-like periplasmic core domain JYQ80_RS03340 PF02687 FtsX-like permease family JYQ80_RS03345 PF03009 Glycerophosphoryl diester phosphodiesterase family JYQ80_RS03350 PF00886 Ribosomal protein S16 JYQ80_RS03380 PF01782 RimM N-terminal domain JYQ80_RS03380 PF05239 PRC-barrel domain JYQ80_RS03385 PF01746 tRNA (Guanine-1)-methyltransferase JYQ80_RS03390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS03400 PF02558 Ketopantoate reductase PanE/ApbA JYQ80_RS03400 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYQ80_RS03405 PF08220 DeoR-like helix-turn-helix domain JYQ80_RS03405 PF00455 DeoR C terminal sensor domain JYQ80_RS03410 PF00294 pfkB family carbohydrate kinase JYQ80_RS03415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS03415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYQ80_RS03420 PF01476 LysM domain JYQ80_RS03420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYQ80_RS03425 PF01476 LysM domain JYQ80_RS03425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYQ80_RS03440 PF09028 Mac 1 JYQ80_RS03455 PF02645 Uncharacterised protein, DegV family COG1307 JYQ80_RS03460 PF13735 tRNA nucleotidyltransferase domain 2 putative JYQ80_RS03460 PF01743 Poly A polymerase head domain JYQ80_RS03460 PF12627 Probable RNA and SrmB- binding site of polymerase A JYQ80_RS03465 PF16326 ABC transporter C-terminal domain JYQ80_RS03465 PF12848 ABC transporter JYQ80_RS03465 PF00005 ABC transporter JYQ80_RS03470 PF01327 Polypeptide deformylase JYQ80_RS03475 PF00149 Calcineurin-like phosphoesterase JYQ80_RS03475 PF17936 Bacterial Ig domain JYQ80_RS03475 PF02872 5'-nucleotidase, C-terminal domain JYQ80_RS03480 PF04607 Region found in RelA / SpoT proteins JYQ80_RS03485 PF00072 Response regulator receiver domain JYQ80_RS03485 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS03490 PF00512 His Kinase A (phospho-acceptor) domain JYQ80_RS03495 PF08544 GHMP kinases C terminal JYQ80_RS03495 PF00288 GHMP kinases N terminal domain JYQ80_RS03495 PF10509 Galactokinase galactose-binding signature JYQ80_RS03505 PF08544 GHMP kinases C terminal JYQ80_RS03505 PF00288 GHMP kinases N terminal domain JYQ80_RS03510 PF01070 FMN-dependent dehydrogenase JYQ80_RS03515 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JYQ80_RS03520 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JYQ80_RS03520 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JYQ80_RS03525 PF00303 Thymidylate synthase JYQ80_RS03530 PF00186 Dihydrofolate reductase JYQ80_RS03540 PF10431 C-terminal, D2-small domain, of ClpB protein JYQ80_RS03540 PF06689 ClpX C4-type zinc finger JYQ80_RS03540 PF07724 AAA domain (Cdc48 subfamily) JYQ80_RS03545 PF01926 50S ribosome-binding GTPase JYQ80_RS03555 PF17871 AAA lid domain JYQ80_RS03555 PF10431 C-terminal, D2-small domain, of ClpB protein JYQ80_RS03555 PF07724 AAA domain (Cdc48 subfamily) JYQ80_RS03555 PF00004 ATPase family associated with various cellular activities (AAA) JYQ80_RS03560 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JYQ80_RS03565 PF01676 Metalloenzyme superfamily JYQ80_RS03570 PF03960 ArsC family JYQ80_RS03575 PF01048 Phosphorylase superfamily JYQ80_RS03580 PF01048 Phosphorylase superfamily JYQ80_RS03590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYQ80_RS03590 PF03466 LysR substrate binding domain JYQ80_RS03600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYQ80_RS03605 PF00156 Phosphoribosyl transferase domain JYQ80_RS03610 PF01425 Amidase JYQ80_RS03615 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYQ80_RS03620 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS03625 PF03167 Uracil DNA glycosylase superfamily JYQ80_RS03630 PF01979 Amidohydrolase family JYQ80_RS03635 PF02660 Glycerol-3-phosphate acyltransferase JYQ80_RS03640 PF00986 DNA gyrase B subunit, carboxyl terminus JYQ80_RS03640 PF00204 DNA gyrase B JYQ80_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS03640 PF01751 Toprim domain JYQ80_RS03645 PF03989 DNA gyrase C-terminal domain, beta-propeller JYQ80_RS03645 PF00521 DNA gyrase/topoisomerase IV, subunit A JYQ80_RS03650 PF01063 Amino-transferase class IV JYQ80_RS03670 PF00575 S1 RNA binding domain JYQ80_RS03685 PF12368 Rhodanase C-terminal JYQ80_RS03685 PF17773 UPF0176 acylphosphatase like domain JYQ80_RS03685 PF00581 Rhodanese-like domain JYQ80_RS03710 PF13167 GTP-binding GTPase N-terminal JYQ80_RS03710 PF01926 50S ribosome-binding GTPase JYQ80_RS03710 PF16360 GTP-binding GTPase Middle Region JYQ80_RS03715 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JYQ80_RS03715 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JYQ80_RS03720 PF12706 Beta-lactamase superfamily domain JYQ80_RS03720 PF00753 Metallo-beta-lactamase superfamily JYQ80_RS03725 PF00106 short chain dehydrogenase JYQ80_RS03730 PF02272 DHHA1 domain JYQ80_RS03730 PF17768 RecJ OB domain JYQ80_RS03730 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JYQ80_RS03730 PF01368 DHH family JYQ80_RS03735 PF00156 Phosphoribosyl transferase domain JYQ80_RS03745 PF00633 Helix-hairpin-helix motif JYQ80_RS03745 PF00730 HhH-GPD superfamily base excision DNA repair protein JYQ80_RS03745 PF10576 Iron-sulfur binding domain of endonuclease III JYQ80_RS03750 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JYQ80_RS03755 PF01784 NIF3 (NGG1p interacting factor 3) JYQ80_RS03760 PF01266 FAD dependent oxidoreductase JYQ80_RS03765 PF00483 Nucleotidyl transferase JYQ80_RS03770 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JYQ80_RS03775 PF16363 GDP-mannose 4,6 dehydratase JYQ80_RS03780 PF00293 NUDIX domain JYQ80_RS03785 PF01594 AI-2E family transporter JYQ80_RS03795 PF05670 NFACT protein RNA binding domain JYQ80_RS03810 PF00005 ABC transporter JYQ80_RS03815 PF17770 Ribonuclease J C-terminal domain JYQ80_RS03815 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYQ80_RS03815 PF00753 Metallo-beta-lactamase superfamily JYQ80_RS03820 PF00756 Putative esterase JYQ80_RS03830 PF12848 ABC transporter JYQ80_RS03830 PF16326 ABC transporter C-terminal domain JYQ80_RS03830 PF00005 ABC transporter JYQ80_RS03835 PF00676 Dehydrogenase E1 component JYQ80_RS03840 PF02779 Transketolase, pyrimidine binding domain JYQ80_RS03840 PF02780 Transketolase, C-terminal domain JYQ80_RS03840 PF00364 Biotin-requiring enzyme JYQ80_RS03845 PF02817 e3 binding domain JYQ80_RS03845 PF00364 Biotin-requiring enzyme JYQ80_RS03845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYQ80_RS03850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYQ80_RS03850 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS03860 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain JYQ80_RS03860 PF02278 Polysaccharide lyase family 8, super-sandwich domain JYQ80_RS03860 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain JYQ80_RS03865 PF03099 Biotin/lipoate A/B protein ligase family JYQ80_RS03865 PF10437 Bacterial lipoate protein ligase C-terminus JYQ80_RS03870 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYQ80_RS03875 PF08353 Domain of unknown function (DUF1727) JYQ80_RS03875 PF08245 Mur ligase middle domain JYQ80_RS03880 PF02457 DisA bacterial checkpoint controller nucleotide-binding JYQ80_RS03890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYQ80_RS03890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYQ80_RS03890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYQ80_RS03890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYQ80_RS03900 PF04055 Radical SAM superfamily JYQ80_RS03900 PF06969 HemN C-terminal domain JYQ80_RS03910 PF13344 Haloacid dehalogenase-like hydrolase JYQ80_RS03920 PF13395 HNH endonuclease JYQ80_RS03920 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 JYQ80_RS03920 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 JYQ80_RS03920 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 JYQ80_RS03925 PF01867 CRISPR associated protein Cas1 JYQ80_RS03930 PF09827 CRISPR associated protein Cas2 JYQ80_RS03935 PF09711 CRISPR-associated protein (Cas_Csn2) JYQ80_RS03945 PF00009 Elongation factor Tu GTP binding domain JYQ80_RS03945 PF00679 Elongation factor G C-terminus JYQ80_RS03945 PF03144 Elongation factor Tu domain 2 JYQ80_RS03945 PF06421 GTP-binding protein LepA C-terminus JYQ80_RS03945 PF14492 Elongation Factor G, domain II JYQ80_RS03950 PF02370 M protein repeat JYQ80_RS03950 PF00746 LPXTG cell wall anchor motif JYQ80_RS03955 PF01641 SelR domain JYQ80_RS03960 PF03601 Conserved hypothetical protein 698 JYQ80_RS03970 PF03830 PTS system sorbose subfamily IIB component JYQ80_RS03975 PF03609 PTS system sorbose-specific iic component JYQ80_RS03980 PF03613 PTS system mannose/fructose/sorbose family IID component JYQ80_RS03985 PF06580 Histidine kinase JYQ80_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS03990 PF12833 Helix-turn-helix domain JYQ80_RS03990 PF00072 Response regulator receiver domain JYQ80_RS04005 PF14602 Hexapeptide repeat of succinyl-transferase JYQ80_RS04005 PF12464 Maltose acetyltransferase JYQ80_RS04005 PF00132 Bacterial transferase hexapeptide (six repeats) JYQ80_RS04010 PF13419 Haloacid dehalogenase-like hydrolase JYQ80_RS04015 PF00171 Aldehyde dehydrogenase family JYQ80_RS04020 PF02151 UvrB/uvrC motif JYQ80_RS04020 PF01541 GIY-YIG catalytic domain JYQ80_RS04020 PF08459 UvrC Helix-hairpin-helix N-terminal JYQ80_RS04025 PF00881 Nitroreductase family JYQ80_RS04030 PF01546 Peptidase family M20/M25/M40 JYQ80_RS04035 PF01926 50S ribosome-binding GTPase JYQ80_RS04035 PF12631 MnmE helical domain JYQ80_RS04035 PF10396 GTP-binding protein TrmE N-terminus JYQ80_RS04040 PF00466 Ribosomal protein L10 JYQ80_RS04045 PF16320 Ribosomal protein L7/L12 dimerisation domain JYQ80_RS04045 PF00542 Ribosomal protein L7/L12 C-terminal domain JYQ80_RS04075 PF00072 Response regulator receiver domain JYQ80_RS04075 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS04080 PF00512 His Kinase A (phospho-acceptor) domain JYQ80_RS04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS04090 PF00005 ABC transporter JYQ80_RS04095 PF00005 ABC transporter JYQ80_RS04110 PF01381 Helix-turn-helix JYQ80_RS04130 PF07943 Penicillin-binding protein 5, C-terminal domain JYQ80_RS04130 PF00768 D-alanyl-D-alanine carboxypeptidase JYQ80_RS04140 PF02875 Mur ligase family, glutamate ligase domain JYQ80_RS04140 PF08245 Mur ligase middle domain JYQ80_RS04145 PF01227 GTP cyclohydrolase I JYQ80_RS04150 PF00809 Pterin binding enzyme JYQ80_RS04155 PF02152 Dihydroneopterin aldolase JYQ80_RS04160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JYQ80_RS04165 PF01565 FAD binding domain JYQ80_RS04165 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JYQ80_RS04170 PF08402 TOBE domain JYQ80_RS04170 PF00005 ABC transporter JYQ80_RS04175 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS04180 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS04185 PF13416 Bacterial extracellular solute-binding protein JYQ80_RS04190 PF00072 Response regulator receiver domain JYQ80_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS04195 PF00989 PAS fold JYQ80_RS04195 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYQ80_RS04195 PF17203 Single cache domain 3 JYQ80_RS04200 PF03390 2-hydroxycarboxylate transporter family JYQ80_RS04205 PF00390 Malic enzyme, N-terminal domain JYQ80_RS04205 PF03949 Malic enzyme, NAD binding domain JYQ80_RS04210 PF08240 Alcohol dehydrogenase GroES-like domain JYQ80_RS04210 PF13823 Alcohol dehydrogenase GroES-associated JYQ80_RS04210 PF00107 Zinc-binding dehydrogenase JYQ80_RS04215 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JYQ80_RS04220 PF00654 Voltage gated chloride channel JYQ80_RS04230 PF01594 AI-2E family transporter JYQ80_RS04235 PF04002 RadC-like JAB domain JYQ80_RS04240 PF07722 Peptidase C26 JYQ80_RS04245 PF06971 Putative DNA-binding protein N-terminus JYQ80_RS04245 PF02629 CoA binding domain JYQ80_RS04255 PF00266 Aminotransferase class-V JYQ80_RS04260 PF14572 Phosphoribosyl synthetase-associated domain JYQ80_RS04260 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JYQ80_RS04270 PF04607 Region found in RelA / SpoT proteins JYQ80_RS04275 PF01513 ATP-NAD kinase JYQ80_RS04280 PF01479 S4 domain JYQ80_RS04280 PF00849 RNA pseudouridylate synthase JYQ80_RS04285 PF01515 Phosphate acetyl/butaryl transferase JYQ80_RS04300 PF00571 CBS domain JYQ80_RS04300 PF00005 ABC transporter JYQ80_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS04310 PF00478 IMP dehydrogenase / GMP reductase domain JYQ80_RS04315 PF00156 Phosphoribosyl transferase domain JYQ80_RS04320 PF00860 Permease family JYQ80_RS04325 PF02424 ApbE family JYQ80_RS04330 PF01361 Tautomerase enzyme JYQ80_RS04335 PF00265 Thymidine kinase JYQ80_RS04340 PF03462 PCRF domain JYQ80_RS04340 PF00472 RF-1 domain JYQ80_RS04345 PF05175 Methyltransferase small domain JYQ80_RS04360 PF00464 Serine hydroxymethyltransferase JYQ80_RS04375 PF00005 ABC transporter JYQ80_RS04375 PF00664 ABC transporter transmembrane region JYQ80_RS04380 PF00005 ABC transporter JYQ80_RS04380 PF00664 ABC transporter transmembrane region JYQ80_RS04385 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS04385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYQ80_RS04390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JYQ80_RS04390 PF00056 lactate/malate dehydrogenase, NAD binding domain JYQ80_RS04395 PF00521 DNA gyrase/topoisomerase IV, subunit A JYQ80_RS04395 PF03989 DNA gyrase C-terminal domain, beta-propeller JYQ80_RS04400 PF04203 Sortase domain JYQ80_RS04405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYQ80_RS04420 PF03006 Haemolysin-III related JYQ80_RS04430 PF01926 50S ribosome-binding GTPase JYQ80_RS04435 PF01351 Ribonuclease HII JYQ80_RS04440 PF18255 DNA processing protein A sterile alpha motif domain JYQ80_RS04440 PF02481 DNA recombination-mediator protein A JYQ80_RS04445 PF01396 Topoisomerase DNA binding C4 zinc finger JYQ80_RS04445 PF01131 DNA topoisomerase JYQ80_RS04445 PF01751 Toprim domain JYQ80_RS04460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYQ80_RS04460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYQ80_RS04475 PF01134 Glucose inhibited division protein A JYQ80_RS04480 PF02436 Conserved carboxylase domain JYQ80_RS04480 PF00682 HMGL-like JYQ80_RS04480 PF00364 Biotin-requiring enzyme JYQ80_RS04490 PF00364 Biotin-requiring enzyme JYQ80_RS04495 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JYQ80_RS04500 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JYQ80_RS04510 PF03600 Citrate transporter JYQ80_RS04520 PF00364 Biotin-requiring enzyme JYQ80_RS04525 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JYQ80_RS04530 PF06857 Malonate decarboxylase delta subunit (MdcD) JYQ80_RS04535 PF03328 HpcH/HpaI aldolase/citrate lyase family JYQ80_RS04540 PF04223 Citrate lyase, alpha subunit (CitF) JYQ80_RS04545 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JYQ80_RS04550 PF00682 HMGL-like JYQ80_RS04550 PF00364 Biotin-requiring enzyme JYQ80_RS04550 PF02436 Conserved carboxylase domain JYQ80_RS04555 PF08218 Citrate lyase ligase C-terminal domain JYQ80_RS04565 PF13495 Phage integrase, N-terminal SAM-like domain JYQ80_RS04565 PF00589 Phage integrase family JYQ80_RS04575 PF00448 SRP54-type protein, GTPase domain JYQ80_RS04575 PF02978 Signal peptide binding domain JYQ80_RS04575 PF02881 SRP54-type protein, helical bundle domain JYQ80_RS04580 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JYQ80_RS04585 PF07702 UTRA domain JYQ80_RS04585 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS04595 PF02540 NAD synthase JYQ80_RS04595 PF00117 Glutamine amidotransferase class-I JYQ80_RS04595 PF00958 GMP synthase C terminal domain JYQ80_RS04605 PF00005 ABC transporter JYQ80_RS04605 PF12848 ABC transporter JYQ80_RS04615 PF02581 Thiamine monophosphate synthase JYQ80_RS04615 PF08543 Phosphomethylpyrimidine kinase JYQ80_RS04620 PF00155 Aminotransferase class I and II JYQ80_RS04620 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS04625 PF13597 Anaerobic ribonucleoside-triphosphate reductase JYQ80_RS04625 PF03477 ATP cone domain JYQ80_RS04630 PF13091 PLD-like domain JYQ80_RS04635 PF01268 Formate--tetrahydrofolate ligase JYQ80_RS04640 PF10437 Bacterial lipoate protein ligase C-terminus JYQ80_RS04640 PF03099 Biotin/lipoate A/B protein ligase family JYQ80_RS04650 PF01661 Macro domain JYQ80_RS04655 PF01597 Glycine cleavage H-protein JYQ80_RS04660 PF00296 Luciferase-like monooxygenase JYQ80_RS04665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYQ80_RS04670 PF03099 Biotin/lipoate A/B protein ligase family JYQ80_RS04675 PF02441 Flavoprotein JYQ80_RS04675 PF04127 DNA / pantothenate metabolism flavoprotein JYQ80_RS04680 PF02441 Flavoprotein JYQ80_RS04685 PF12822 ECF transporter, substrate-specific component JYQ80_RS04690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYQ80_RS04690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYQ80_RS04690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYQ80_RS04690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYQ80_RS04695 PF02653 Branched-chain amino acid transport system / permease component JYQ80_RS04700 PF02653 Branched-chain amino acid transport system / permease component JYQ80_RS04705 PF00005 ABC transporter JYQ80_RS04710 PF02608 ABC transporter substrate-binding protein PnrA-like JYQ80_RS04715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYQ80_RS04720 PF05175 Methyltransferase small domain JYQ80_RS04725 PF00485 Phosphoribulokinase / Uridine kinase family JYQ80_RS04730 PF01649 Ribosomal protein S20 JYQ80_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS04735 PF00512 His Kinase A (phospho-acceptor) domain JYQ80_RS04740 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS04740 PF00072 Response regulator receiver domain JYQ80_RS04745 PF01433 Peptidase family M1 domain JYQ80_RS04745 PF11838 ERAP1-like C-terminal domain JYQ80_RS04750 PF01895 PhoU domain JYQ80_RS04755 PF00005 ABC transporter JYQ80_RS04760 PF00005 ABC transporter JYQ80_RS04765 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS04770 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS04775 PF12849 PBP superfamily domain JYQ80_RS04780 PF17126 RsmF rRNA methyltransferase first C-terminal domain JYQ80_RS04780 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JYQ80_RS04780 PF01189 16S rRNA methyltransferase RsmB/F JYQ80_RS04785 PF00459 Inositol monophosphatase family JYQ80_RS04790 PF05256 Uncharacterised protein family (UPF0223) JYQ80_RS04795 PF03960 ArsC family JYQ80_RS04800 PF06574 FAD synthetase JYQ80_RS04800 PF01687 Riboflavin kinase JYQ80_RS04805 PF16198 tRNA pseudouridylate synthase B C-terminal domain JYQ80_RS04805 PF01509 TruB family pseudouridylate synthase (N terminal domain) JYQ80_RS04830 PF12704 MacB-like periplasmic core domain JYQ80_RS04830 PF00005 ABC transporter JYQ80_RS04830 PF02687 FtsX-like permease family JYQ80_RS04845 PF03780 Asp23 family, cell envelope-related function JYQ80_RS04850 PF05532 CsbD-like JYQ80_RS04855 PF03780 Asp23 family, cell envelope-related function JYQ80_RS04875 PF00580 UvrD/REP helicase N-terminal domain JYQ80_RS04875 PF13361 UvrD-like helicase C-terminal domain JYQ80_RS04880 PF01235 Sodium:alanine symporter family JYQ80_RS04885 PF16916 Dimerisation domain of Zinc Transporter JYQ80_RS04885 PF01545 Cation efflux family JYQ80_RS04890 PF07373 CAMP factor (Cfa) JYQ80_RS04895 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYQ80_RS04900 PF00005 ABC transporter JYQ80_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS04910 PF03831 PhnA domain JYQ80_RS04910 PF08274 PhnA Zinc-Ribbon JYQ80_RS04915 PF01380 SIS domain JYQ80_RS04920 PF10502 Signal peptidase, peptidase S26 JYQ80_RS04925 PF00224 Pyruvate kinase, barrel domain JYQ80_RS04925 PF02887 Pyruvate kinase, alpha/beta domain JYQ80_RS04930 PF00365 Phosphofructokinase JYQ80_RS04935 PF01336 OB-fold nucleic acid binding domain JYQ80_RS04935 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYQ80_RS04935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYQ80_RS04935 PF14579 Helix-hairpin-helix motif JYQ80_RS04935 PF02811 PHP domain JYQ80_RS04940 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS04945 PF00005 ABC transporter JYQ80_RS04970 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain JYQ80_RS04970 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain JYQ80_RS05100 PF17288 Terminase RNAseH like domain JYQ80_RS05100 PF04466 Phage terminase large subunit JYQ80_RS05150 PF05866 Endodeoxyribonuclease RusA JYQ80_RS05160 PF00436 Single-strand binding protein family JYQ80_RS05250 PF00343 Carbohydrate phosphorylase JYQ80_RS05255 PF02446 4-alpha-glucanotransferase JYQ80_RS05260 PF00356 Bacterial regulatory proteins, lacI family JYQ80_RS05260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYQ80_RS05265 PF13416 Bacterial extracellular solute-binding protein JYQ80_RS05270 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS05280 PF00356 Bacterial regulatory proteins, lacI family JYQ80_RS05290 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS05300 PF00686 Starch binding domain JYQ80_RS05300 PF00128 Alpha amylase, catalytic domain JYQ80_RS05300 PF01833 IPT/TIG domain JYQ80_RS05305 PF02903 Alpha amylase, N-terminal ig-like domain JYQ80_RS05305 PF00128 Alpha amylase, catalytic domain JYQ80_RS05310 PF13416 Bacterial extracellular solute-binding protein JYQ80_RS05315 PF07859 alpha/beta hydrolase fold JYQ80_RS05315 PF00934 PE family JYQ80_RS05320 PF04914 DltD protein JYQ80_RS05325 PF00550 Phosphopantetheine attachment site JYQ80_RS05330 PF03062 MBOAT, membrane-bound O-acyltransferase family JYQ80_RS05335 PF13193 AMP-binding enzyme C-terminal domain JYQ80_RS05335 PF00501 AMP-binding enzyme JYQ80_RS05345 PF17757 UvrB interaction domain JYQ80_RS05345 PF12344 Ultra-violet resistance protein B JYQ80_RS05345 PF00271 Helicase conserved C-terminal domain JYQ80_RS05345 PF04851 Type III restriction enzyme, res subunit JYQ80_RS05345 PF02151 UvrB/uvrC motif JYQ80_RS05350 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYQ80_RS05355 PF00005 ABC transporter JYQ80_RS05365 PF02378 Phosphotransferase system, EIIC JYQ80_RS05375 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYQ80_RS05380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS05385 PF08279 HTH domain JYQ80_RS05385 PF05043 Mga helix-turn-helix domain JYQ80_RS05385 PF00874 PRD domain JYQ80_RS05385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYQ80_RS05395 PF00232 Glycosyl hydrolase family 1 JYQ80_RS05410 PF09269 Domain of unknown function (DUF1967) JYQ80_RS05410 PF01018 GTP1/OBG JYQ80_RS05410 PF01926 50S ribosome-binding GTPase JYQ80_RS05425 PF00849 RNA pseudouridylate synthase JYQ80_RS05425 PF01479 S4 domain JYQ80_RS05435 PF07690 Major Facilitator Superfamily JYQ80_RS05440 PF08903 Domain of unknown function (DUF1846) JYQ80_RS05455 PF01938 TRAM domain JYQ80_RS05455 PF05958 tRNA (Uracil-5-)-methyltransferase JYQ80_RS05460 PF03816 Cell envelope-related transcriptional attenuator domain JYQ80_RS05465 PF01202 Shikimate kinase JYQ80_RS05470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYQ80_RS05480 PF00557 Metallopeptidase family M24 JYQ80_RS05485 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS05485 PF07085 DRTGG domain JYQ80_RS05485 PF00571 CBS domain JYQ80_RS05485 PF03061 Thioesterase superfamily JYQ80_RS05490 PF13302 Acetyltransferase (GNAT) domain JYQ80_RS05495 PF01378 B domain JYQ80_RS05495 PF00746 LPXTG cell wall anchor motif JYQ80_RS05495 PF17573 GA-like domain JYQ80_RS05495 PF00746 LPXTG cell wall anchor motif JYQ80_RS05495 PF17573 GA-like domain JYQ80_RS05495 PF01378 B domain JYQ80_RS05500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYQ80_RS05505 PF02773 S-adenosylmethionine synthetase, C-terminal domain JYQ80_RS05505 PF02772 S-adenosylmethionine synthetase, central domain JYQ80_RS05505 PF00438 S-adenosylmethionine synthetase, N-terminal domain JYQ80_RS05515 PF08279 HTH domain JYQ80_RS05515 PF03099 Biotin/lipoate A/B protein ligase family JYQ80_RS05515 PF02237 Biotin protein ligase C terminal domain JYQ80_RS05525 PF12169 DNA polymerase III subunits gamma and tau domain III JYQ80_RS05530 PF13185 GAF domain JYQ80_RS05545 PF00485 Phosphoribulokinase / Uridine kinase family JYQ80_RS05550 PF00270 DEAD/DEAH box helicase JYQ80_RS05550 PF00271 Helicase conserved C-terminal domain JYQ80_RS05555 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain JYQ80_RS05555 PF01522 Polysaccharide deacetylase JYQ80_RS05560 PF00171 Aldehyde dehydrogenase family JYQ80_RS05565 PF05524 PEP-utilising enzyme, N-terminal JYQ80_RS05565 PF00391 PEP-utilising enzyme, mobile domain JYQ80_RS05565 PF02896 PEP-utilising enzyme, TIM barrel domain JYQ80_RS05570 PF00381 PTS HPr component phosphorylation site JYQ80_RS05575 PF00462 Glutaredoxin JYQ80_RS05580 PF08343 Ribonucleotide reductase N-terminal JYQ80_RS05580 PF02867 Ribonucleotide reductase, barrel domain JYQ80_RS05580 PF00317 Ribonucleotide reductase, all-alpha domain JYQ80_RS05585 PF00268 Ribonucleotide reductase, small chain JYQ80_RS05610 PF01381 Helix-turn-helix JYQ80_RS05615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYQ80_RS05615 PF02272 DHHA1 domain JYQ80_RS05615 PF01411 tRNA synthetases class II (A) JYQ80_RS05620 PF13145 PPIC-type PPIASE domain JYQ80_RS05625 PF01596 O-methyltransferase JYQ80_RS05630 PF07690 Major Facilitator Superfamily JYQ80_RS05635 PF08439 Oligopeptidase F JYQ80_RS05635 PF01432 Peptidase family M3 JYQ80_RS05645 PF01479 S4 domain JYQ80_RS05645 PF00849 RNA pseudouridylate synthase JYQ80_RS05650 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYQ80_RS05655 PF02547 Queuosine biosynthesis protein JYQ80_RS05680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYQ80_RS05680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYQ80_RS05690 PF03772 Competence protein JYQ80_RS05690 PF00753 Metallo-beta-lactamase superfamily JYQ80_RS05690 PF13567 Domain of unknown function (DUF4131) JYQ80_RS05695 PF10531 SLBB domain JYQ80_RS05700 PF01553 Acyltransferase JYQ80_RS05705 PF05175 Methyltransferase small domain JYQ80_RS05710 PF01541 GIY-YIG catalytic domain JYQ80_RS05715 PF02705 K+ potassium transporter JYQ80_RS05720 PF00271 Helicase conserved C-terminal domain JYQ80_RS05720 PF00270 DEAD/DEAH box helicase JYQ80_RS05725 PF16658 Class II release factor RF3, C-terminal domain JYQ80_RS05725 PF03144 Elongation factor Tu domain 2 JYQ80_RS05725 PF00009 Elongation factor Tu GTP binding domain JYQ80_RS05735 PF02875 Mur ligase family, glutamate ligase domain JYQ80_RS05735 PF01225 Mur ligase family, catalytic domain JYQ80_RS05735 PF08245 Mur ligase middle domain JYQ80_RS05740 PF07478 D-ala D-ala ligase C-terminus JYQ80_RS05740 PF01820 D-ala D-ala ligase N-terminus JYQ80_RS05745 PF13662 Toprim domain JYQ80_RS05745 PF02132 RecR protein JYQ80_RS05750 PF01226 Formate/nitrite transporter JYQ80_RS05760 PF08279 HTH domain JYQ80_RS05760 PF02829 3H domain JYQ80_RS05765 PF00300 Histidine phosphatase superfamily (branch 1) JYQ80_RS05770 PF01180 Dihydroorotate dehydrogenase JYQ80_RS05960 PF03837 RecT family JYQ80_RS05985 PF07261 Replication initiation and membrane attachment JYQ80_RS06020 PF08346 AntA/AntB antirepressor JYQ80_RS06020 PF10548 P22AR C-terminal domain JYQ80_RS06035 PF01381 Helix-turn-helix JYQ80_RS06050 PF14659 Phage integrase, N-terminal SAM-like domain JYQ80_RS06050 PF00589 Phage integrase family JYQ80_RS06055 PF00216 Bacterial DNA-binding protein JYQ80_RS06065 PF13472 GDSL-like Lipase/Acylhydrolase family JYQ80_RS06070 PF02645 Uncharacterised protein, DegV family COG1307 JYQ80_RS06080 PF13476 AAA domain JYQ80_RS06085 PF02863 Arginine repressor, C-terminal domain JYQ80_RS06085 PF01316 Arginine repressor, DNA binding domain JYQ80_RS06090 PF01479 S4 domain JYQ80_RS06090 PF01728 FtsJ-like methyltransferase JYQ80_RS06095 PF00348 Polyprenyl synthetase JYQ80_RS06100 PF02609 Exonuclease VII small subunit JYQ80_RS06105 PF02601 Exonuclease VII, large subunit JYQ80_RS06105 PF13742 OB-fold nucleic acid binding domain JYQ80_RS06110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JYQ80_RS06110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JYQ80_RS06115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYQ80_RS06115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYQ80_RS06115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYQ80_RS06115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYQ80_RS06120 PF00875 DNA photolyase JYQ80_RS06120 PF03441 FAD binding domain of DNA photolyase JYQ80_RS06125 PF00005 ABC transporter JYQ80_RS06130 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS06135 PF08796 Protein of unknown function (DUF1797) JYQ80_RS06140 PF00004 ATPase family associated with various cellular activities (AAA) JYQ80_RS06140 PF10431 C-terminal, D2-small domain, of ClpB protein JYQ80_RS06140 PF17871 AAA lid domain JYQ80_RS06140 PF07724 AAA domain (Cdc48 subfamily) JYQ80_RS06145 PF00293 NUDIX domain JYQ80_RS06155 PF00133 tRNA synthetases class I (I, L, M and V) JYQ80_RS06155 PF08264 Anticodon-binding domain of tRNA JYQ80_RS06160 PF05103 DivIVA protein JYQ80_RS06165 PF01479 S4 domain JYQ80_RS06165 PF17774 Putative RNA-binding domain in YlmH JYQ80_RS06175 PF04472 Cell division protein SepF JYQ80_RS06180 PF01168 Alanine racemase, N-terminal domain JYQ80_RS06185 PF12327 FtsZ family, C-terminal domain JYQ80_RS06185 PF00091 Tubulin/FtsZ family, GTPase domain JYQ80_RS06190 PF11983 Membrane-attachment and polymerisation-promoting switch JYQ80_RS06190 PF02491 SHS2 domain inserted in FTSA JYQ80_RS06195 PF08478 POTRA domain, FtsQ-type JYQ80_RS06200 PF03033 Glycosyltransferase family 28 N-terminal domain JYQ80_RS06200 PF04101 Glycosyltransferase family 28 C-terminal domain JYQ80_RS06205 PF08245 Mur ligase middle domain JYQ80_RS06205 PF02875 Mur ligase family, glutamate ligase domain JYQ80_RS06215 PF00009 Elongation factor Tu GTP binding domain JYQ80_RS06215 PF00679 Elongation factor G C-terminus JYQ80_RS06215 PF14492 Elongation Factor G, domain II JYQ80_RS06215 PF03144 Elongation factor Tu domain 2 JYQ80_RS06220 PF00581 Rhodanese-like domain JYQ80_RS06225 PF00480 ROK family JYQ80_RS06235 PF00210 Ferritin-like domain JYQ80_RS06245 PF04055 Radical SAM superfamily JYQ80_RS06250 PF06265 Protein of unknown function (DUF1027) JYQ80_RS06265 PF13180 PDZ domain JYQ80_RS06265 PF05362 Lon protease (S16) C-terminal proteolytic domain JYQ80_RS06270 PF01467 Cytidylyltransferase-like JYQ80_RS06280 PF03590 Aspartate-ammonia ligase JYQ80_RS06285 PF00696 Amino acid kinase family JYQ80_RS06290 PF01546 Peptidase family M20/M25/M40 JYQ80_RS06295 PF03606 C4-dicarboxylate anaerobic carrier JYQ80_RS06300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYQ80_RS06300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYQ80_RS06305 PF13673 Acetyltransferase (GNAT) domain JYQ80_RS06320 PF02863 Arginine repressor, C-terminal domain JYQ80_RS06320 PF01316 Arginine repressor, DNA binding domain JYQ80_RS06335 PF06580 Histidine kinase JYQ80_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS06335 PF00672 HAMP domain JYQ80_RS06335 PF02743 Cache domain JYQ80_RS06340 PF12833 Helix-turn-helix domain JYQ80_RS06340 PF00072 Response regulator receiver domain JYQ80_RS06345 PF01625 Peptide methionine sulfoxide reductase JYQ80_RS06345 PF01641 SelR domain JYQ80_RS06350 PF08534 Redoxin JYQ80_RS06355 PF02683 Cytochrome C biogenesis protein transmembrane region JYQ80_RS06360 PF09827 CRISPR associated protein Cas2 JYQ80_RS06365 PF01867 CRISPR associated protein Cas1 JYQ80_RS06395 PF08264 Anticodon-binding domain of tRNA JYQ80_RS06395 PF00133 tRNA synthetases class I (I, L, M and V) JYQ80_RS06395 PF10458 Valyl tRNA synthetase tRNA binding arm JYQ80_RS06425 PF01817 Chorismate mutase type II JYQ80_RS06425 PF00793 DAHP synthetase I family JYQ80_RS06430 PF01761 3-dehydroquinate synthase JYQ80_RS06445 PF13649 Methyltransferase domain JYQ80_RS06450 PF08501 Shikimate dehydrogenase substrate binding domain JYQ80_RS06450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYQ80_RS06455 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JYQ80_RS06455 PF00703 Glycosyl hydrolases family 2 JYQ80_RS06455 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JYQ80_RS06455 PF02837 Glycosyl hydrolases family 2, sugar binding domain JYQ80_RS06455 PF16355 Domain of unknown function (DUF4982) JYQ80_RS06460 PF00072 Response regulator receiver domain JYQ80_RS06460 PF12833 Helix-turn-helix domain JYQ80_RS06465 PF06580 Histidine kinase JYQ80_RS06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS06465 PF00672 HAMP domain JYQ80_RS06465 PF02743 Cache domain JYQ80_RS06475 PF12010 Domain of unknown function (DUF3502) JYQ80_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS06490 PF00480 ROK family JYQ80_RS06495 PF00232 Glycosyl hydrolase family 1 JYQ80_RS06500 PF02838 Glycosyl hydrolase family 20, domain 2 JYQ80_RS06500 PF07555 beta-N-acetylglucosaminidase JYQ80_RS06505 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS06515 PF01074 Glycosyl hydrolases family 38 N-terminal domain JYQ80_RS06515 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 JYQ80_RS06515 PF07748 Glycosyl hydrolases family 38 C-terminal domain JYQ80_RS06515 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain JYQ80_RS06515 PF09261 Alpha mannosidase middle domain JYQ80_RS06525 PF01938 TRAM domain JYQ80_RS06525 PF05958 tRNA (Uracil-5-)-methyltransferase JYQ80_RS06530 PF02631 RecX family JYQ80_RS06535 PF04167 Protein of unknown function (DUF402) JYQ80_RS06600 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JYQ80_RS06600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JYQ80_RS06610 PF00271 Helicase conserved C-terminal domain JYQ80_RS06610 PF04851 Type III restriction enzyme, res subunit JYQ80_RS06615 PF01205 Uncharacterized protein family UPF0029 JYQ80_RS06615 PF09186 Domain of unknown function (DUF1949) JYQ80_RS06620 PF00291 Pyridoxal-phosphate dependent enzyme JYQ80_RS06625 PF00575 S1 RNA binding domain JYQ80_RS06630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYQ80_RS06635 PF00196 Bacterial regulatory proteins, luxR family JYQ80_RS06635 PF00072 Response regulator receiver domain JYQ80_RS06640 PF00672 HAMP domain JYQ80_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS06640 PF07730 Histidine kinase JYQ80_RS06650 PF00069 Protein kinase domain JYQ80_RS06650 PF03793 PASTA domain JYQ80_RS06660 PF01189 16S rRNA methyltransferase RsmB/F JYQ80_RS06660 PF01029 NusB family JYQ80_RS06665 PF02911 Formyl transferase, C-terminal domain JYQ80_RS06665 PF00551 Formyl transferase JYQ80_RS06670 PF04851 Type III restriction enzyme, res subunit JYQ80_RS06670 PF00271 Helicase conserved C-terminal domain JYQ80_RS06670 PF18074 Primosomal protein N C-terminal domain JYQ80_RS06670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JYQ80_RS06670 PF17764 3′ DNA-binding domain (3′BD) JYQ80_RS06675 PF01192 RNA polymerase Rpb6 JYQ80_RS06680 PF00625 Guanylate kinase JYQ80_RS06685 PF01966 HD domain JYQ80_RS06685 PF00013 KH domain JYQ80_RS06685 PF12072 Domain of unknown function (DUF3552) JYQ80_RS06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYQ80_RS06690 PF03466 LysR substrate binding domain JYQ80_RS06695 PF00108 Thiolase, N-terminal domain JYQ80_RS06695 PF02803 Thiolase, C-terminal domain JYQ80_RS06700 PF01144 Coenzyme A transferase JYQ80_RS06705 PF01144 Coenzyme A transferase JYQ80_RS06720 PF02664 S-Ribosylhomocysteinase (LuxS) JYQ80_RS06725 PF18041 MapZ extracellular domain 1 JYQ80_RS06725 PF18708 MapZ extracellular C-terminal domain 2 JYQ80_RS06730 PF01170 Putative RNA methylase family UPF0020 JYQ80_RS06730 PF02926 THUMP domain JYQ80_RS06740 PF05103 DivIVA protein JYQ80_RS06745 PF06908 YspA SLOG family JYQ80_RS06750 PF03838 Recombination protein U JYQ80_RS06755 PF00912 Transglycosylase JYQ80_RS06755 PF00905 Penicillin binding protein transpeptidase domain JYQ80_RS06760 PF03051 Peptidase C1-like family JYQ80_RS06765 PF02540 NAD synthase JYQ80_RS06770 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JYQ80_RS06770 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JYQ80_RS06770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JYQ80_RS06775 PF00324 Amino acid permease JYQ80_RS06780 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS06790 PF00005 ABC transporter JYQ80_RS06795 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS06800 PF00271 Helicase conserved C-terminal domain JYQ80_RS06800 PF00270 DEAD/DEAH box helicase JYQ80_RS06805 PF00953 Glycosyl transferase family 4 JYQ80_RS06805 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JYQ80_RS06810 PF03717 Penicillin-binding Protein dimerisation domain JYQ80_RS06810 PF00905 Penicillin binding protein transpeptidase domain JYQ80_RS06810 PF03793 PASTA domain JYQ80_RS06820 PF01795 MraW methylase family JYQ80_RS06830 PF00171 Aldehyde dehydrogenase family JYQ80_RS06835 PF00696 Amino acid kinase family JYQ80_RS06845 PF00005 ABC transporter JYQ80_RS06855 PF00456 Transketolase, thiamine diphosphate binding domain JYQ80_RS06855 PF02779 Transketolase, pyrimidine binding domain JYQ80_RS06855 PF02780 Transketolase, C-terminal domain JYQ80_RS06860 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYQ80_RS06870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS06870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYQ80_RS06875 PF00230 Major intrinsic protein JYQ80_RS06880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JYQ80_RS06880 PF01266 FAD dependent oxidoreductase JYQ80_RS06885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYQ80_RS06885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYQ80_RS06890 PF03413 Peptidase propeptide and YPEB domain JYQ80_RS06895 PF05979 Bacterial protein of unknown function (DUF896) JYQ80_RS06900 PF02092 Glycyl-tRNA synthetase beta subunit JYQ80_RS06905 PF02091 Glycyl-tRNA synthetase alpha subunit JYQ80_RS06910 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JYQ80_RS06915 PF00248 Aldo/keto reductase family JYQ80_RS06920 PF01979 Amidohydrolase family JYQ80_RS06925 PF02690 Na+/Pi-cotransporter JYQ80_RS06935 PF02645 Uncharacterised protein, DegV family COG1307 JYQ80_RS06940 PF00440 Bacterial regulatory proteins, tetR family JYQ80_RS06950 PF03458 UPF0126 domain JYQ80_RS06955 PF01791 DeoC/LacD family aldolase JYQ80_RS06965 PF02502 Ribose/Galactose Isomerase JYQ80_RS06970 PF02502 Ribose/Galactose Isomerase JYQ80_RS06990 PF00455 DeoR C terminal sensor domain JYQ80_RS06990 PF08220 DeoR-like helix-turn-helix domain JYQ80_RS07000 PF00403 Heavy-metal-associated domain JYQ80_RS07005 PF03965 Penicillinase repressor JYQ80_RS07010 PF07859 alpha/beta hydrolase fold JYQ80_RS07015 PF02033 Ribosome-binding factor A JYQ80_RS07020 PF00009 Elongation factor Tu GTP binding domain JYQ80_RS07020 PF11987 Translation-initiation factor 2 JYQ80_RS07020 PF04760 Translation initiation factor IF-2, N-terminal region JYQ80_RS07025 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JYQ80_RS07030 PF04296 Protein of unknown function (DUF448) JYQ80_RS07035 PF08529 NusA N-terminal domain JYQ80_RS07035 PF13184 NusA-like KH domain JYQ80_RS07035 PF00575 S1 RNA binding domain JYQ80_RS07040 PF02576 RimP N-terminal domain JYQ80_RS07040 PF17384 RimP C-terminal SH3 domain JYQ80_RS07055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYQ80_RS07055 PF13457 GW (Gly-Tryp) dipeptide domain JYQ80_RS07195 PF01555 DNA methylase JYQ80_RS07305 PF02899 Phage integrase, N-terminal SAM-like domain JYQ80_RS07305 PF00589 Phage integrase family JYQ80_RS07315 PF02390 Putative methyltransferase JYQ80_RS07325 PF05975 Bacterial ABC transporter protein EcsB JYQ80_RS07330 PF00005 ABC transporter JYQ80_RS07335 PF01230 HIT domain JYQ80_RS07345 PF03816 Cell envelope-related transcriptional attenuator domain JYQ80_RS07355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JYQ80_RS07360 PF00860 Permease family JYQ80_RS07370 PF03610 PTS system fructose IIA component JYQ80_RS07370 PF03830 PTS system sorbose subfamily IIB component JYQ80_RS07375 PF03609 PTS system sorbose-specific iic component JYQ80_RS07380 PF03613 PTS system mannose/fructose/sorbose family IID component JYQ80_RS07390 PF02403 Seryl-tRNA synthetase N-terminal domain JYQ80_RS07390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYQ80_RS07395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JYQ80_RS07400 PF17848 Acetyl-coA carboxylase zinc finger domain JYQ80_RS07400 PF01039 Carboxyl transferase domain JYQ80_RS07405 PF00289 Biotin carboxylase, N-terminal domain JYQ80_RS07405 PF02785 Biotin carboxylase C-terminal domain JYQ80_RS07405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYQ80_RS07410 PF07977 FabA-like domain JYQ80_RS07415 PF00364 Biotin-requiring enzyme JYQ80_RS07420 PF00109 Beta-ketoacyl synthase, N-terminal domain JYQ80_RS07420 PF02801 Beta-ketoacyl synthase, C-terminal domain JYQ80_RS07430 PF00698 Acyl transferase domain JYQ80_RS07435 PF03060 Nitronate monooxygenase JYQ80_RS07440 PF00550 Phosphopantetheine attachment site JYQ80_RS07445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYQ80_RS07445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYQ80_RS07455 PF00378 Enoyl-CoA hydratase/isomerase JYQ80_RS07460 PF00684 DnaJ central domain JYQ80_RS07460 PF01556 DnaJ C terminal domain JYQ80_RS07460 PF00226 DnaJ domain JYQ80_RS07465 PF00012 Hsp70 protein JYQ80_RS07470 PF01025 GrpE JYQ80_RS07475 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JYQ80_RS07475 PF01628 HrcA protein C terminal domain JYQ80_RS07490 PF00300 Histidine phosphatase superfamily (branch 1) JYQ80_RS07495 PF04226 Transglycosylase associated protein JYQ80_RS07505 PF02637 GatB domain JYQ80_RS07505 PF02934 GatB/GatE catalytic domain JYQ80_RS07510 PF01425 Amidase JYQ80_RS07515 PF02686 Glu-tRNAGln amidotransferase C subunit JYQ80_RS07520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JYQ80_RS07520 PF02896 PEP-utilising enzyme, TIM barrel domain JYQ80_RS07520 PF00391 PEP-utilising enzyme, mobile domain JYQ80_RS07525 PF00857 Isochorismatase family JYQ80_RS07530 PF08222 CodY helix-turn-helix domain JYQ80_RS07530 PF06018 CodY GAF-like domain JYQ80_RS07535 PF00155 Aminotransferase class I and II JYQ80_RS07550 PF00710 Asparaginase, N-terminal JYQ80_RS07550 PF17763 Glutaminase/Asparaginase C-terminal domain JYQ80_RS07560 PF00005 ABC transporter JYQ80_RS07565 PF00270 DEAD/DEAH box helicase JYQ80_RS07565 PF00271 Helicase conserved C-terminal domain JYQ80_RS07565 PF17191 RecG wedge domain JYQ80_RS07570 PF00005 ABC transporter JYQ80_RS07585 PF00005 ABC transporter JYQ80_RS07585 PF00664 ABC transporter transmembrane region JYQ80_RS07590 PF00664 ABC transporter transmembrane region JYQ80_RS07590 PF00005 ABC transporter JYQ80_RS07595 PF00005 ABC transporter JYQ80_RS07600 PF01032 FecCD transport family JYQ80_RS07605 PF01497 Periplasmic binding protein JYQ80_RS07620 PF01476 LysM domain JYQ80_RS07620 PF05257 CHAP domain JYQ80_RS07625 PF01168 Alanine racemase, N-terminal domain JYQ80_RS07625 PF00842 Alanine racemase, C-terminal domain JYQ80_RS07630 PF01648 4'-phosphopantetheinyl transferase superfamily JYQ80_RS07635 PF07516 SecA Wing and Scaffold domain JYQ80_RS07635 PF07517 SecA DEAD-like domain JYQ80_RS07635 PF02810 SEC-C motif JYQ80_RS07635 PF01043 SecA preprotein cross-linking domain JYQ80_RS07640 PF01609 Transposase DDE domain JYQ80_RS07640 PF13808 DDE_Tnp_1-associated JYQ80_RS07645 PF13808 DDE_Tnp_1-associated JYQ80_RS07645 PF01609 Transposase DDE domain JYQ80_RS07650 PF01238 Phosphomannose isomerase type I JYQ80_RS07655 PF00480 ROK family JYQ80_RS07665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYQ80_RS07665 PF02378 Phosphotransferase system, EIIC JYQ80_RS07665 PF00367 phosphotransferase system, EIIB JYQ80_RS07670 PF08244 Glycosyl hydrolases family 32 C terminal JYQ80_RS07670 PF00251 Glycosyl hydrolases family 32 N-terminal domain JYQ80_RS07675 PF00356 Bacterial regulatory proteins, lacI family JYQ80_RS07680 PF01029 NusB family JYQ80_RS07685 PF03780 Asp23 family, cell envelope-related function JYQ80_RS07690 PF09285 Elongation factor P, C-terminal JYQ80_RS07690 PF08207 Elongation factor P (EF-P) KOW-like domain JYQ80_RS07690 PF01132 Elongation factor P (EF-P) OB domain JYQ80_RS07695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYQ80_RS07700 PF00557 Metallopeptidase family M24 JYQ80_RS07700 PF01321 Creatinase/Prolidase N-terminal domain JYQ80_RS07705 PF00005 ABC transporter JYQ80_RS07705 PF17760 UvrA interaction domain JYQ80_RS07705 PF17755 UvrA DNA-binding domain JYQ80_RS07720 PF01084 Ribosomal protein S18 JYQ80_RS07725 PF00436 Single-strand binding protein family JYQ80_RS07730 PF01250 Ribosomal protein S6 JYQ80_RS07740 PF00730 HhH-GPD superfamily base excision DNA repair protein JYQ80_RS07740 PF14815 NUDIX domain JYQ80_RS07745 PF01381 Helix-turn-helix JYQ80_RS07750 PF00085 Thioredoxin JYQ80_RS07760 PF00488 MutS domain V JYQ80_RS07760 PF01713 Smr domain JYQ80_RS07775 PF11858 Domain of unknown function (DUF3378) JYQ80_RS07775 PF01351 Ribonuclease HII JYQ80_RS07780 PF10502 Signal peptidase, peptidase S26 JYQ80_RS07785 PF13538 UvrD-like helicase C-terminal domain JYQ80_RS07785 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JYQ80_RS07785 PF14490 Helix-hairpin-helix containing domain JYQ80_RS07795 PF00817 impB/mucB/samB family JYQ80_RS07795 PF11798 IMS family HHH motif JYQ80_RS07795 PF11799 impB/mucB/samB family C-terminal domain JYQ80_RS07800 PF01228 Glycine radical JYQ80_RS07800 PF02901 Pyruvate formate lyase-like JYQ80_RS07805 PF00144 Beta-lactamase JYQ80_RS07820 PF00230 Major intrinsic protein JYQ80_RS07825 PF07690 Major Facilitator Superfamily JYQ80_RS07830 PF13545 Crp-like helix-turn-helix domain JYQ80_RS07835 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal JYQ80_RS07835 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JYQ80_RS07835 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JYQ80_RS07850 PF02575 YbaB/EbfC DNA-binding family JYQ80_RS07855 PF07739 TipAS antibiotic-recognition domain JYQ80_RS07855 PF13411 MerR HTH family regulatory protein JYQ80_RS07865 PF04394 Protein of unknown function, DUF536 JYQ80_RS07865 PF08279 HTH domain JYQ80_RS07875 PF01791 DeoC/LacD family aldolase JYQ80_RS07880 PF07670 Nucleoside recognition JYQ80_RS07880 PF07662 Na+ dependent nucleoside transporter C-terminus JYQ80_RS07880 PF01773 Na+ dependent nucleoside transporter N-terminus JYQ80_RS07885 PF01048 Phosphorylase superfamily JYQ80_RS07895 PF00253 Ribosomal protein S14p/S29e JYQ80_RS07900 PF00814 Glycoprotease family JYQ80_RS07905 PF00583 Acetyltransferase (GNAT) family JYQ80_RS07910 PF00814 Glycoprotease family JYQ80_RS07915 PF07288 Protein of unknown function (DUF1447) JYQ80_RS07920 PF17770 Ribonuclease J C-terminal domain JYQ80_RS07920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYQ80_RS07920 PF00753 Metallo-beta-lactamase superfamily JYQ80_RS07925 PF00120 Glutamine synthetase, catalytic domain JYQ80_RS07925 PF03951 Glutamine synthetase, beta-Grasp domain JYQ80_RS07930 PF13411 MerR HTH family regulatory protein JYQ80_RS07940 PF00162 Phosphoglycerate kinase JYQ80_RS07945 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JYQ80_RS07955 PF02734 DAK2 domain JYQ80_RS07955 PF13684 Dihydroxyacetone kinase family JYQ80_RS07960 PF03780 Asp23 family, cell envelope-related function JYQ80_RS07965 PF01609 Transposase DDE domain JYQ80_RS07965 PF13808 DDE_Tnp_1-associated JYQ80_RS07970 PF00830 Ribosomal L28 family JYQ80_RS07975 PF01116 Fructose-bisphosphate aldolase class-II JYQ80_RS07990 PF00117 Glutamine amidotransferase class-I JYQ80_RS07990 PF06418 CTP synthase N-terminus JYQ80_RS07995 PF05066 HB1, ASXL, restriction endonuclease HTH domain JYQ80_RS08000 PF05698 Bacterial trigger factor protein (TF) C-terminus JYQ80_RS08000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYQ80_RS08000 PF05697 Bacterial trigger factor protein (TF) JYQ80_RS08005 PF00924 Mechanosensitive ion channel JYQ80_RS08010 PF04260 Protein of unknown function (DUF436) JYQ80_RS08015 PF07155 ECF-type riboflavin transporter, S component JYQ80_RS08020 PF08543 Phosphomethylpyrimidine kinase JYQ80_RS08025 PF01416 tRNA pseudouridine synthase JYQ80_RS08065 PF13333 Integrase core domain JYQ80_RS08065 PF00665 Integrase core domain JYQ80_RS08065 PF13276 HTH-like domain JYQ80_RS08070 PF00005 ABC transporter JYQ80_RS08070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYQ80_RS08075 PF00005 ABC transporter JYQ80_RS08075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYQ80_RS08080 PF12911 N-terminal TM domain of oligopeptide transport permease C JYQ80_RS08080 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS08085 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS08090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYQ80_RS08095 PF07943 Penicillin-binding protein 5, C-terminal domain JYQ80_RS08095 PF00768 D-alanyl-D-alanine carboxypeptidase JYQ80_RS08100 PF07943 Penicillin-binding protein 5, C-terminal domain JYQ80_RS08100 PF00768 D-alanyl-D-alanine carboxypeptidase JYQ80_RS08105 PF01458 Uncharacterized protein family (UPF0051) JYQ80_RS08110 PF01592 NifU-like N terminal domain JYQ80_RS08115 PF00266 Aminotransferase class-V JYQ80_RS08120 PF01458 Uncharacterized protein family (UPF0051) JYQ80_RS08125 PF00005 ABC transporter JYQ80_RS08130 PF00953 Glycosyl transferase family 4 JYQ80_RS08135 PF05389 Negative regulator of genetic competence (MecA) JYQ80_RS08140 PF02673 Bacitracin resistance protein BacA JYQ80_RS08150 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS08155 PF00005 ABC transporter JYQ80_RS08165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYQ80_RS08165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYQ80_RS08170 PF00679 Elongation factor G C-terminus JYQ80_RS08170 PF14492 Elongation Factor G, domain II JYQ80_RS08170 PF03764 Elongation factor G, domain IV JYQ80_RS08170 PF00009 Elongation factor Tu GTP binding domain JYQ80_RS08170 PF03144 Elongation factor Tu domain 2 JYQ80_RS08175 PF00177 Ribosomal protein S7p/S5e JYQ80_RS08180 PF00164 Ribosomal protein S12/S23 JYQ80_RS08190 PF00156 Phosphoribosyl transferase domain JYQ80_RS08190 PF09182 Bacterial purine repressor, N-terminal JYQ80_RS08195 PF01966 HD domain JYQ80_RS08200 PF02646 RmuC family JYQ80_RS08205 PF04263 Thiamin pyrophosphokinase, catalytic domain JYQ80_RS08205 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JYQ80_RS08210 PF00834 Ribulose-phosphate 3 epimerase family JYQ80_RS08215 PF03193 RsgA GTPase JYQ80_RS08215 PF16745 RsgA N-terminal domain JYQ80_RS08220 PF00398 Ribosomal RNA adenine dimethylase JYQ80_RS08225 PF13331 Domain of unknown function (DUF4093) JYQ80_RS08230 PF01026 TatD related DNase JYQ80_RS08240 PF00480 ROK family JYQ80_RS08245 PF00701 Dihydrodipicolinate synthetase family JYQ80_RS08255 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component JYQ80_RS08270 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JYQ80_RS08275 PF00468 Ribosomal protein L34 JYQ80_RS08280 PF01424 R3H domain JYQ80_RS08280 PF14804 Jag N-terminus JYQ80_RS08285 PF02096 60Kd inner membrane protein JYQ80_RS08290 PF00825 Ribonuclease P JYQ80_RS08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS08305 PF00989 PAS fold JYQ80_RS08305 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYQ80_RS08305 PF17203 Single cache domain 3 JYQ80_RS08310 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYQ80_RS08315 PF01987 Mitochondrial biogenesis AIM24 JYQ80_RS08320 PF00484 Carbonic anhydrase JYQ80_RS08325 PF18073 Rubredoxin metal binding domain JYQ80_RS08330 PF00692 dUTPase JYQ80_RS08335 PF02677 Epoxyqueuosine reductase QueH JYQ80_RS08340 PF00005 ABC transporter JYQ80_RS08340 PF00664 ABC transporter transmembrane region JYQ80_RS08345 PF00664 ABC transporter transmembrane region JYQ80_RS08345 PF00005 ABC transporter JYQ80_RS08355 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYQ80_RS08355 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYQ80_RS08360 PF00483 Nucleotidyl transferase JYQ80_RS08365 PF01694 Rhomboid family JYQ80_RS08370 PF13808 DDE_Tnp_1-associated JYQ80_RS08370 PF01609 Transposase DDE domain JYQ80_RS08380 PF00082 Subtilase family JYQ80_RS08380 PF06280 Fn3-like domain JYQ80_RS08380 PF02225 PA domain JYQ80_RS08395 PF00746 LPXTG cell wall anchor motif JYQ80_RS08395 PF04650 YSIRK type signal peptide JYQ80_RS08400 PF08270 M protein trans-acting positive regulator (MGA) PRD domain JYQ80_RS08400 PF05043 Mga helix-turn-helix domain JYQ80_RS08400 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JYQ80_RS08410 PF05257 CHAP domain JYQ80_RS08410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYQ80_RS08415 PF00512 His Kinase A (phospho-acceptor) domain JYQ80_RS08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYQ80_RS08415 PF13493 Domain of unknown function (DUF4118) JYQ80_RS08415 PF02702 Osmosensitive K+ channel His kinase sensor domain JYQ80_RS08420 PF00072 Response regulator receiver domain JYQ80_RS08420 PF00486 Transcriptional regulatory protein, C terminal JYQ80_RS08425 PF12704 MacB-like periplasmic core domain JYQ80_RS08425 PF02687 FtsX-like permease family JYQ80_RS08430 PF00005 ABC transporter JYQ80_RS08455 PF13145 PPIC-type PPIASE domain JYQ80_RS08465 PF01640 Peptidase C10 family JYQ80_RS08465 PF13734 Spi protease inhibitor JYQ80_RS08480 PF04608 Phosphatidylglycerophosphatase A JYQ80_RS08490 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYQ80_RS08495 PF01228 Glycine radical JYQ80_RS08495 PF02901 Pyruvate formate lyase-like JYQ80_RS08500 PF02378 Phosphotransferase system, EIIC JYQ80_RS08505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYQ80_RS08510 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYQ80_RS08515 PF04198 Putative sugar-binding domain JYQ80_RS08520 PF08220 DeoR-like helix-turn-helix domain JYQ80_RS08520 PF00455 DeoR C terminal sensor domain JYQ80_RS08525 PF04055 Radical SAM superfamily JYQ80_RS08535 PF00471 Ribosomal protein L33 JYQ80_RS08540 PF00912 Transglycosylase JYQ80_RS08540 PF00905 Penicillin binding protein transpeptidase domain JYQ80_RS08550 PF00849 RNA pseudouridylate synthase JYQ80_RS08550 PF01479 S4 domain JYQ80_RS08560 PF03577 Peptidase family C69 JYQ80_RS08570 PF00118 TCP-1/cpn60 chaperonin family JYQ80_RS08575 PF00166 Chaperonin 10 Kd subunit JYQ80_RS08580 PF00004 ATPase family associated with various cellular activities (AAA) JYQ80_RS08580 PF07724 AAA domain (Cdc48 subfamily) JYQ80_RS08580 PF17871 AAA lid domain JYQ80_RS08580 PF10431 C-terminal, D2-small domain, of ClpB protein JYQ80_RS08580 PF02861 Clp amino terminal domain, pathogenicity island component JYQ80_RS08585 PF05848 CtsR N-terminal HTH domain JYQ80_RS08585 PF17727 CtsR C-terminal dimerization domain JYQ80_RS08590 PF00313 'Cold-shock' DNA-binding domain JYQ80_RS08600 PF00578 AhpC/TSA family JYQ80_RS08605 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYQ80_RS08605 PF13192 Thioredoxin domain JYQ80_RS08610 PF01979 Amidohydrolase family JYQ80_RS08615 PF17391 Urocanase N-terminal domain JYQ80_RS08615 PF17392 Urocanase C-terminal domain JYQ80_RS08615 PF01175 Urocanase Rossmann-like domain JYQ80_RS08620 PF02971 Formiminotransferase domain JYQ80_RS08620 PF07837 Formiminotransferase domain, N-terminal subdomain JYQ80_RS08625 PF04961 Formiminotransferase-cyclodeaminase JYQ80_RS08630 PF01268 Formate--tetrahydrofolate ligase JYQ80_RS08640 PF13520 Amino acid permease JYQ80_RS08645 PF00221 Aromatic amino acid lyase JYQ80_RS08650 PF00491 Arginase family JYQ80_RS08660 PF00318 Ribosomal protein S2 JYQ80_RS08665 PF00889 Elongation factor TS JYQ80_RS08670 PF05649 Peptidase family M13 JYQ80_RS08670 PF01431 Peptidase family M13 JYQ80_RS08675 PF16657 Maltogenic Amylase, C-terminal domain JYQ80_RS08675 PF00128 Alpha amylase, catalytic domain JYQ80_RS08680 PF00367 phosphotransferase system, EIIB JYQ80_RS08680 PF02378 Phosphotransferase system, EIIC JYQ80_RS08685 PF07702 UTRA domain JYQ80_RS08685 PF00392 Bacterial regulatory proteins, gntR family JYQ80_RS08690 PF01638 HxlR-like helix-turn-helix JYQ80_RS08695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYQ80_RS08700 PF03883 Peroxide stress protein YaaA JYQ80_RS08715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYQ80_RS08725 PF13597 Anaerobic ribonucleoside-triphosphate reductase JYQ80_RS08725 PF03477 ATP cone domain JYQ80_RS08735 PF06949 Protein of unknown function (DUF1292) JYQ80_RS08740 PF03652 Holliday junction resolvase JYQ80_RS08745 PF06135 IreB regulatory phosphoprotein JYQ80_RS08750 PF03960 ArsC family JYQ80_RS08755 PF00154 recA bacterial DNA recombination protein JYQ80_RS08760 PF00994 Probable molybdopterin binding domain JYQ80_RS08760 PF18146 Damage-inducible protein CinA KH domain JYQ80_RS08760 PF02464 Competence-damaged protein JYQ80_RS08765 PF00117 Glutamine amidotransferase class-I JYQ80_RS08765 PF13673 Acetyltransferase (GNAT) domain JYQ80_RS08765 PF00958 GMP synthase C terminal domain JYQ80_RS08765 PF13302 Acetyltransferase (GNAT) domain JYQ80_RS08765 PF03352 Methyladenine glycosylase JYQ80_RS08770 PF07499 RuvA, C-terminal domain JYQ80_RS08770 PF01330 RuvA N terminal domain JYQ80_RS08775 PF07690 Major Facilitator Superfamily JYQ80_RS08780 PF01119 DNA mismatch repair protein, C-terminal domain JYQ80_RS08780 PF08676 MutL C terminal dimerisation domain JYQ80_RS08785 PF05190 MutS family domain IV JYQ80_RS08785 PF00488 MutS domain V JYQ80_RS08785 PF05188 MutS domain II JYQ80_RS08785 PF01624 MutS domain I JYQ80_RS08785 PF05192 MutS domain III JYQ80_RS08795 PF01316 Arginine repressor, DNA binding domain JYQ80_RS08795 PF02863 Arginine repressor, C-terminal domain JYQ80_RS08800 PF00750 tRNA synthetases class I (R) JYQ80_RS08800 PF05746 DALR anticodon binding domain JYQ80_RS08800 PF03485 Arginyl tRNA synthetase N terminal domain JYQ80_RS08810 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JYQ80_RS08810 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JYQ80_RS08815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JYQ80_RS08815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JYQ80_RS08820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JYQ80_RS08820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JYQ80_RS08825 PF01336 OB-fold nucleic acid binding domain JYQ80_RS08825 PF00152 tRNA synthetases class II (D, K and N) JYQ80_RS08825 PF02938 GAD domain JYQ80_RS08830 PF03129 Anticodon binding domain JYQ80_RS08830 PF13393 Histidyl-tRNA synthetase JYQ80_RS08835 PF01783 Ribosomal L32p protein family JYQ80_RS08840 PF00471 Ribosomal protein L33 JYQ80_RS08850 PF01022 Bacterial regulatory protein, arsR family JYQ80_RS08885 PF00293 NUDIX domain JYQ80_RS08890 PF03551 Transcriptional regulator PadR-like family JYQ80_RS08915 PF00163 Ribosomal protein S4/S9 N-terminal domain JYQ80_RS08915 PF01479 S4 domain JYQ80_RS08920 PF01609 Transposase DDE domain JYQ80_RS08920 PF13808 DDE_Tnp_1-associated JYQ80_RS08930 PF00772 DnaB-like helicase N terminal domain JYQ80_RS08930 PF03796 DnaB-like helicase C terminal domain JYQ80_RS08935 PF01281 Ribosomal protein L9, N-terminal domain JYQ80_RS08935 PF03948 Ribosomal protein L9, C-terminal domain JYQ80_RS08940 PF01368 DHH family JYQ80_RS08940 PF02272 DHHA1 domain JYQ80_RS08945 PF13932 GidA associated domain JYQ80_RS08945 PF01134 Glucose inhibited division protein A JYQ80_RS08960 PF03315 Serine dehydratase beta chain JYQ80_RS08960 PF01842 ACT domain JYQ80_RS08965 PF03313 Serine dehydratase alpha chain JYQ80_RS08970 PF06737 Transglycosylase-like domain JYQ80_RS08975 PF02361 Cobalt transport protein JYQ80_RS08980 PF00005 ABC transporter JYQ80_RS08985 PF00005 ABC transporter JYQ80_RS08990 PF01066 CDP-alcohol phosphatidyltransferase JYQ80_RS09000 PF00675 Insulinase (Peptidase family M16) JYQ80_RS09000 PF05193 Peptidase M16 inactive domain JYQ80_RS09010 PF00535 Glycosyl transferase family 2 JYQ80_RS09015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYQ80_RS09015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYQ80_RS09015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYQ80_RS09020 PF00483 Nucleotidyl transferase JYQ80_RS09030 PF02463 RecF/RecN/SMC N terminal domain JYQ80_RS09035 PF06800 Sugar transport protein JYQ80_RS09040 PF00478 IMP dehydrogenase / GMP reductase domain JYQ80_RS09040 PF00571 CBS domain JYQ80_RS09045 PF00579 tRNA synthetases class I (W and Y) JYQ80_RS09050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JYQ80_RS09050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JYQ80_RS09055 PF00005 ABC transporter JYQ80_RS09055 PF12848 ABC transporter JYQ80_RS09085 PF02590 Predicted SPOUT methyltransferase JYQ80_RS09090 PF13180 PDZ domain JYQ80_RS09095 PF02195 ParB-like nuclease domain JYQ80_RS09095 PF17762 HTH domain found in ParB protein