SPy_0002 SM00382 ATPases associated with a variety of cellular activities SPy_0002 SM00760 Bacterial dnaA protein helix-turn-helix domain SPy_0003 SM00480 DNA polymerase III beta subunit SPy_0008 SM00487 DEAD-like helicases superfamily SPy_0008 SM00490 helicase superfamily c-terminal domain SPy_0008 SM00982 SPy_0008 SPy_0008 SM01058 CarD-like/TRCF domain SPy_0009 SM00363 S4 RNA-binding domain SPy_0015 SM00382 ATPases associated with a variety of cellular activities SPy_0020 SM01400 SPy_0020 SPy_0025 SM01211 SPy_0025 SPy_0032 SM01209 SPy_0032 SPy_0032 SM01210 SPy_0032 SPy_0033 SM01001 AIR carboxylase SPy_0036 SM00998 Adenylosuccinate lyase C-terminus SPy_0037 SM00530 Helix-turn-helix XRE-family like proteins SPy_0038 SM00382 ATPases associated with a variety of cellular activities SPy_0039 SM00226 Low molecular weight phosphatase family SPy_0040 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SPy_0044 SM00829 Enoylreductase SPy_0047 SM01403 SPy_0047 SPy_0052 SM01382 SPy_0052 SPy_0052 SM01383 SPy_0052 SPy_0056 SM00322 K homology RNA-binding domain SPy_0061 SM01374 SPy_0061 SPy_0062 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPy_0075 SM00316 Ribosomal protein S1-like RNA-binding domain SPy_0080 SM00662 RNA polymerases D SPy_0092 SM00347 helix_turn_helix multiple antibiotic resistance protein SPy_0093 SM00382 ATPases associated with a variety of cellular activities SPy_0096 SM00363 S4 RNA-binding domain SPy_0099 SM00663 RNA polymerase I subunit A N-terminus SPy_0141 SM00882 Coenzyme A transferase SPy_0142 SM00882 Coenzyme A transferase SPy_0160 SM00788 Adenylosuccinate synthetase SPy_0164 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SPy_0164 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPy_0177 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPy_0179 SM01007 Class II Aldolase and Adducin N-terminal domain SPy_0183 SM00382 ATPases associated with a variety of cellular activities SPy_0185 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SPy_0185 SM00474 3'-5' exonuclease SPy_0185 SM00475 5'-3' exonuclease SPy_0185 SM00482 DNA polymerase A domain SPy_0186 SM00881 CoA binding domain SPy_0190 SM00470 ParB-like nuclease domain SPy_0208 SM00849 Metallo-beta-lactamase superfamily SPy_0210 SM00460 Transglutaminase/protease-like homologues SPy_0228 SM00347 helix_turn_helix multiple antibiotic resistance protein SPy_0229 SM00382 ATPases associated with a variety of cellular activities SPy_0230 SM00382 ATPases associated with a variety of cellular activities SPy_0236 SM00382 ATPases associated with a variety of cellular activities SPy_0237 SM00947 Carbonic anhydrase SPy_0245 SM00448 cheY-homologous receiver domain SPy_0245 SM00850 LytTr DNA-binding domain SPy_0248 SM00393 Putative single-stranded nucleic acids-binding domain SPy_0248 SM01245 SPy_0248 SPy_0257 SM01130 SPy_0257 SPy_0262 SM00650 Ribosomal RNA adenine dimethylases SPy_0265 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SPy_0273 SM00838 Elongation factor G C-terminus SPy_0273 SM00889 Elongation factor G, domain IV SPy_0274 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPy_0276 SM00382 ATPases associated with a variety of cellular activities SPy_0277 SM00062 Bacterial periplasmic substrate-binding proteins SPy_0285 SM00382 ATPases associated with a variety of cellular activities SPy_0292 SM00936 Penicillin-binding protein 5, C-terminal domain SPy_0296 SM00382 ATPases associated with a variety of cellular activities SPy_0297 SM00382 ATPases associated with a variety of cellular activities SPy_0307 SM01103 SPy_0307 SPy_0309 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPy_0317 SM00062 Bacterial periplasmic substrate-binding proteins SPy_0320 SM00382 ATPases associated with a variety of cellular activities SPy_0320 SM00930 SPy_0320 SPy_0336 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPy_0336 SM00387 Histidine kinase-like ATPases SPy_0336 SM00388 His Kinase A (phosphoacceptor) domain SPy_0342 SM00487 DEAD-like helicases superfamily SPy_0342 SM00490 helicase superfamily c-terminal domain SPy_0356 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPy_0364 SM00116 Domain in cystathionine beta-synthase and other proteins. SPy_0369 SM00363 S4 RNA-binding domain SPy_0370 SM01234 SPy_0370 SPy_0374 SM00014 Acid phosphatase homologues SPy_0376 SM00729 Elongator protein 3, MiaB family, Radical SAM SPy_0378 SM01091 Transporter associated domain SPy_0380 SM01131 SPy_0380 SPy_0386 SM00382 ATPases associated with a variety of cellular activities SPy_0450 SM00529 Helix-turn-helix diphteria tox regulatory element SPy_0450 SM00899 SPy_0450 SPy_0454 SM00382 ATPases associated with a variety of cellular activities SPy_0458 SM00382 ATPases associated with a variety of cellular activities SPy_0458 SM00843 SPy_0458 SPy_0460 SM00649 Ribosomal protein L11/L12 SPy_0469 SM00257 Lysin motif SPy_0472 SM00986 Uracil DNA glycosylase superfamily SPy_0472 SM00987 UreE urease accessory protein, C-terminal domain SPy_0496 SM00530 Helix-turn-helix XRE-family like proteins SPy_0497 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SPy_0497 SM01232 SPy_0497 SPy_0503 SM00316 Ribosomal protein S1-like RNA-binding domain SPy_0503 SM00955 SPy_0503 SPy_0514 SM00354 helix_turn _helix lactose operon repressor SPy_0517 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPy_0518 SM00382 ATPases associated with a variety of cellular activities SPy_0528 SM00448 cheY-homologous receiver domain SPy_0528 SM00862 Transcriptional regulatory protein, C terminal SPy_0529 SM00091 PAS domain SPy_0529 SM00387 Histidine kinase-like ATPases SPy_0529 SM00388 His Kinase A (phosphoacceptor) domain SPy_0530 SM00849 Metallo-beta-lactamase superfamily SPy_0531 SM00358 Double-stranded RNA binding motif SPy_0531 SM00535 Ribonuclease III family SPy_0532 SM00968 SMC proteins Flexible Hinge Domain SPy_0542 SM00984 UDP binding domain SPy_0569 SM00382 ATPases associated with a variety of cellular activities SPy_0569 SM00962 SRP54-type protein, GTPase domain SPy_0569 SM00963 SRP54-type protein, helical bundle domain SPy_0571 SM01061 CAT RNA binding domain SPy_0580 SM00316 Ribosomal protein S1-like RNA-binding domain SPy_0580 SM00732 Likely ribonuclease with RNase H fold. SPy_0581 SM00731 SprT homologues. SPy_0598 SM00855 Phosphoglycerate mutase family SPy_0621 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPy_0623 SM00831 Cation transporter/ATPase, N-terminus SPy_0627 SM00354 helix_turn _helix lactose operon repressor SPy_0643 SM00937 SPy_0643 SPy_0644 SM00382 ATPases associated with a variety of cellular activities SPy_0646 SM00849 Metallo-beta-lactamase superfamily SPy_0649 SM00479 SPy_0649 SPy_0649 SM00487 DEAD-like helicases superfamily SPy_0649 SM00491 SPy_0649 SPy_0655 SM00857 Resolvase, N terminal domain SPy_0657 SM00530 Helix-turn-helix XRE-family like proteins SPy_0658 SM00530 Helix-turn-helix XRE-family like proteins SPy_0669 SM00487 DEAD-like helicases superfamily SPy_0669 SM00490 helicase superfamily c-terminal domain SPy_0679 SM00470 ParB-like nuclease domain SPy_0710 SM00047 Lysozyme subfamily 2 SPy_0712 SM00892 DNA/RNA non-specific endonuclease SPy_0715 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_0715 SM00866 SPy_0715 SPy_0722 SM00830 Chorismate mutase type II SPy_0727 SM00387 Histidine kinase-like ATPases SPy_0727 SM00433 TopoisomeraseII SPy_0731 SM01192 SPy_0731 SPy_0731 SM01193 SPy_0731 SPy_0744 SM00382 ATPases associated with a variety of cellular activities SPy_0751 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPy_0751 SM00292 breast cancer carboxy-terminal domain SPy_0751 SM00532 Ligase N family SPy_0752 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPy_0760 SM00382 ATPases associated with a variety of cellular activities SPy_0766 SM00892 DNA/RNA non-specific endonuclease SPy_0769 SM00873 B3/4 domain SPy_0769 SM00874 tRNA synthetase B5 domain SPy_0769 SM00896 Ferredoxin-fold anticodon binding domain SPy_0773 SM00382 ATPases associated with a variety of cellular activities SPy_0778 SM00062 Bacterial periplasmic substrate-binding proteins SPy_0778 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPy_0781 SM00400 zinc finger SPy_0781 SM00493 SPy_0781 SPy_0790 SM00382 ATPases associated with a variety of cellular activities SPy_0817 SM00981 SPy_0817 SPy_0818 SM00854 Bacterial capsule synthesis protein PGA_cap SPy_0827 SM00363 S4 RNA-binding domain SPy_0833 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SPy_0835 SM00851 MGS-like domain SPy_0835 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPy_0835 SM01209 SPy_0835 SPy_0837 SM00382 ATPases associated with a variety of cellular activities SPy_0853 SM00420 helix_turn_helix, Deoxyribose operon repressor SPy_0853 SM01134 SPy_0853 SPy_0856 SM00047 Lysozyme subfamily 2 SPy_0857 SM00047 Lysozyme subfamily 2 SPy_0867 SM00382 ATPases associated with a variety of cellular activities SPy_0873 SM00954 Region found in RelA / SpoT proteins SPy_0874 SM00448 cheY-homologous receiver domain SPy_0874 SM00862 Transcriptional regulatory protein, C terminal SPy_0875 SM00387 Histidine kinase-like ATPases SPy_0875 SM00388 His Kinase A (phosphoacceptor) domain SPy_0885 SM00382 ATPases associated with a variety of cellular activities SPy_0885 SM00994 ClpX C4-type zinc finger SPy_0885 SM01086 C-terminal, D2-small domain, of ClpB protein SPy_0888 SM00382 ATPases associated with a variety of cellular activities SPy_0888 SM01086 C-terminal, D2-small domain, of ClpB protein SPy_0900 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPy_0903 SM00062 Bacterial periplasmic substrate-binding proteins SPy_0905 SM00986 Uracil DNA glycosylase superfamily SPy_0905 SM00987 UreE urease accessory protein, C-terminal domain SPy_0908 SM01207 SPy_0908 SPy_0909 SM00387 Histidine kinase-like ATPases SPy_0909 SM00433 TopoisomeraseII SPy_0910 SM00434 DNA Topoisomerase IV SPy_0913 SM00316 Ribosomal protein S1-like RNA-binding domain SPy_0915 SM00450 Rhodanese Homology Domain SPy_0929 SM00478 endonuclease III SPy_0929 SM00525 SPy_0929 SPy_0939 SM00530 Helix-turn-helix XRE-family like proteins SPy_0980 SM01040 BRO family, N-terminal domain SPy_1006 SM00641 Glycosyl hydrolases family 25 SPy_1012 SM00028 Tetratricopeptide repeats SPy_1019 SM00382 ATPases associated with a variety of cellular activities SPy_1020 SM00849 Metallo-beta-lactamase superfamily SPy_1025 SM00382 ATPases associated with a variety of cellular activities SPy_1028 SM00861 Transketolase, pyrimidine binding domain SPy_1040 SM00729 Elongator protein 3, MiaB family, Radical SAM SPy_1053 SM00838 Elongation factor G C-terminus SPy_1062 SM00342 helix_turn_helix, arabinose operon control protein SPy_1062 SM00448 cheY-homologous receiver domain SPy_1065 SM01266 SPy_1065 SPy_1068 SM00465 GIY-YIG type nucleases (URI domain) SPy_1081 SM00448 cheY-homologous receiver domain SPy_1081 SM00862 Transcriptional regulatory protein, C terminal SPy_1082 SM00387 Histidine kinase-like ATPases SPy_1082 SM00388 His Kinase A (phosphoacceptor) domain SPy_1085 SM00382 ATPases associated with a variety of cellular activities SPy_1088 SM00530 Helix-turn-helix XRE-family like proteins SPy_1093 SM00936 Penicillin-binding protein 5, C-terminal domain SPy_1099 SM00905 Dihydroneopterin aldolase SPy_1102 SM00382 ATPases associated with a variety of cellular activities SPy_1106 SM00448 cheY-homologous receiver domain SPy_1110 SM00919 Malic enzyme, NAD binding domain SPy_1110 SM01274 SPy_1110 SPy_1111 SM00829 Enoylreductase SPy_1120 SM00881 CoA binding domain SPy_1123 SM01400 SPy_1123 SPy_1124 SM01118 SPy_1124 SPy_1125 SM00954 Region found in RelA / SpoT proteins SPy_1133 SM00382 ATPases associated with a variety of cellular activities SPy_1135 SM01240 SPy_1135 SPy_1141 SM00937 SPy_1141 SPy_1148 SM00382 ATPases associated with a variety of cellular activities SPy_1149 SM00382 ATPases associated with a variety of cellular activities SPy_1152 SM00434 DNA Topoisomerase IV SPy_1158 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPy_1164 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPy_1164 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPy_1164 SM00493 SPy_1164 SPy_1179 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1179 SM00895 SPy_1179 SPy_1192 SM00764 Citrate lyase ligase C-terminal domain SPy_1198 SM00530 Helix-turn-helix XRE-family like proteins SPy_1200 SM00382 ATPases associated with a variety of cellular activities SPy_1200 SM00962 SRP54-type protein, GTPase domain SPy_1200 SM00963 SRP54-type protein, helical bundle domain SPy_1202 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1202 SM00866 SPy_1202 SPy_1206 SM00382 ATPases associated with a variety of cellular activities SPy_1210 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1212 SM00155 Phospholipase D. Active site motifs. SPy_1216 SM00506 Appr-1"-p processing enzyme SPy_1227 SM00382 ATPases associated with a variety of cellular activities SPy_1236 SM00387 Histidine kinase-like ATPases SPy_1236 SM00388 His Kinase A (phosphoacceptor) domain SPy_1237 SM00448 cheY-homologous receiver domain SPy_1237 SM00862 Transcriptional regulatory protein, C terminal SPy_1241 SM00382 ATPases associated with a variety of cellular activities SPy_1242 SM00382 ATPases associated with a variety of cellular activities SPy_1250 SM00904 Riboflavin kinase SPy_1257 SM00382 ATPases associated with a variety of cellular activities SPy_1259 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1274 SM00062 Bacterial periplasmic substrate-binding proteins SPy_1275 SM00382 ATPases associated with a variety of cellular activities SPy_1284 SM00481 DNA polymerase alpha chain like domain SPy_1285 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1286 SM00382 ATPases associated with a variety of cellular activities SPy_1293 SM00354 helix_turn _helix lactose operon repressor SPy_1297 SM00354 helix_turn _helix lactose operon repressor SPy_1302 SM00632 SPy_1302 SPy_1302 SM00642 Alpha-amylase domain SPy_1302 SM01065 Starch binding domain SPy_1304 SM00642 Alpha-amylase domain SPy_1314 SM00487 DEAD-like helicases superfamily SPy_1314 SM00490 helicase superfamily c-terminal domain SPy_1315 SM00062 Bacterial periplasmic substrate-binding proteins SPy_1315 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPy_1316 SM00382 ATPases associated with a variety of cellular activities SPy_1337 SM00363 S4 RNA-binding domain SPy_1355 SM00116 Domain in cystathionine beta-synthase and other proteins. SPy_1361 SM00364 Leucine-rich repeats, bacterial type SPy_1361 SM00365 Leucine-rich repeat, SDS22-like subfamily SPy_1361 SM00369 Leucine-rich repeats, typical (most populated) subfamily SPy_1364 SM00382 ATPases associated with a variety of cellular activities SPy_1369 SM00487 DEAD-like helicases superfamily SPy_1369 SM00490 helicase superfamily c-terminal domain SPy_1386 SM00530 Helix-turn-helix XRE-family like proteins SPy_1389 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPy_1398 SM00363 S4 RNA-binding domain SPy_1408 SM00849 Metallo-beta-lactamase superfamily SPy_1409 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPy_1410 SM00563 Phosphate acyltransferases SPy_1415 SM00487 DEAD-like helicases superfamily SPy_1415 SM00490 helicase superfamily c-terminal domain SPy_1422 SM00493 SPy_1422 SPy_1429 SM00855 Phosphoglycerate mutase family SPy_1436 SM00892 DNA/RNA non-specific endonuclease SPy_1438 SM00047 Lysozyme subfamily 2 SPy_1468 SM00507 HNH nucleases SPy_1485 SM00530 Helix-turn-helix XRE-family like proteins SPy_1486 SM00530 Helix-turn-helix XRE-family like proteins SPy_1487 SM00910 SPy_1487 SPy_1489 SM00411 bacterial (prokaryotic) histone like domain SPy_1497 SM00363 S4 RNA-binding domain SPy_1506 SM00382 ATPases associated with a variety of cellular activities SPy_1509 SM00382 ATPases associated with a variety of cellular activities SPy_1509 SM01086 C-terminal, D2-small domain, of ClpB protein SPy_1515 SM00363 S4 RNA-binding domain SPy_1520 SM00864 Tubulin/FtsZ family, GTPase domain SPy_1520 SM00865 Tubulin/FtsZ family, C-terminal domain SPy_1521 SM00842 Cell division protein FtsA SPy_1527 SM00838 Elongation factor G C-terminus SPy_1528 SM00450 Rhodanese Homology Domain SPy_1535 SM00354 helix_turn _helix lactose operon repressor SPy_1548 SM00419 helix_turn_helix, cAMP Regulatory protein SPy_1551 SM00873 B3/4 domain SPy_1553 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPy_1553 SM00387 Histidine kinase-like ATPases SPy_1556 SM00342 helix_turn_helix, arabinose operon control protein SPy_1556 SM00448 cheY-homologous receiver domain SPy_1567 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPy_1567 SM00487 DEAD-like helicases superfamily SPy_1587 SM00342 helix_turn_helix, arabinose operon control protein SPy_1587 SM00448 cheY-homologous receiver domain SPy_1588 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPy_1602 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1603 SM01149 SPy_1603 SPy_1604 SM00872 Alpha mannosidase, middle domain SPy_1616 SM00487 DEAD-like helicases superfamily SPy_1616 SM00490 helicase superfamily c-terminal domain SPy_1619 SM00316 Ribosomal protein S1-like RNA-binding domain SPy_1621 SM00421 helix_turn_helix, Lux Regulon SPy_1621 SM00448 cheY-homologous receiver domain SPy_1622 SM00387 Histidine kinase-like ATPases SPy_1625 SM00220 Serine/Threonine protein kinases, catalytic domain SPy_1625 SM00740 SPy_1625 SPy_1626 SM00331 Sigma factor PP2C-like phosphatases SPy_1626 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SPy_1629 SM00487 DEAD-like helicases superfamily SPy_1629 SM00490 helicase superfamily c-terminal domain SPy_1630 SM01409 SPy_1630 SPy_1632 SM00072 Guanylate kinase homologues. SPy_1633 SM00322 K homology RNA-binding domain SPy_1633 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPy_1638 SM00882 Coenzyme A transferase SPy_1639 SM00882 Coenzyme A transferase SPy_1644 SM00981 SPy_1644 SPy_1657 SM00382 ATPases associated with a variety of cellular activities SPy_1659 SM00487 DEAD-like helicases superfamily SPy_1659 SM00490 helicase superfamily c-terminal domain SPy_1664 SM00740 SPy_1664 SPy_1674 SM00382 ATPases associated with a variety of cellular activities SPy_1676 SM00861 Transketolase, pyrimidine binding domain SPy_1704 SM01133 SPy_1704 SPy_1712 SM00420 helix_turn_helix, Deoxyribose operon repressor SPy_1712 SM01134 SPy_1712 SPy_1724 SM00322 K homology RNA-binding domain SPy_1729 SM00382 ATPases associated with a variety of cellular activities SPy_1745 SM00878 Biotin carboxylase C-terminal domain SPy_1748 SM00825 Beta-ketoacyl synthase SPy_1749 SM00822 SPy_1749 SPy_1750 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SPy_1755 SM00347 helix_turn_helix multiple antibiotic resistance protein SPy_1759 SM00271 DnaJ molecular chaperone homology domain SPy_1764 SM00047 Lysozyme subfamily 2 SPy_1766 SM00855 Phosphoglycerate mutase family SPy_1770 SM00845 GatB domain SPy_1782 SM00870 SPy_1782 SPy_1784 SM00382 ATPases associated with a variety of cellular activities SPy_1785 SM00487 DEAD-like helicases superfamily SPy_1785 SM00490 helicase superfamily c-terminal domain SPy_1787 SM00382 ATPases associated with a variety of cellular activities SPy_1790 SM00382 ATPases associated with a variety of cellular activities SPy_1791 SM00382 ATPases associated with a variety of cellular activities SPy_1793 SM00382 ATPases associated with a variety of cellular activities SPy_1798 SM00365 Leucine-rich repeat, SDS22-like subfamily SPy_1798 SM00369 Leucine-rich repeats, typical (most populated) subfamily SPy_1798 SM00725 NEAr Transporter domain SPy_1802 SM01005 Alanine racemase, C-terminal domain SPy_1805 SM00957 SecA DEAD-like domain SPy_1805 SM00958 SecA preprotein cross-linking domain SPy_1816 SM00640 Glycosyl hydrolases family 32 SPy_1817 SM00354 helix_turn _helix lactose operon repressor SPy_1821 SM00841 Elongation factor P, C-terminal SPy_1821 SM01185 SPy_1821 SPy_1825 SM00382 ATPases associated with a variety of cellular activities SPy_1833 SM00478 endonuclease III SPy_1834 SM00530 Helix-turn-helix XRE-family like proteins SPy_1836 SM00014 Acid phosphatase homologues SPy_1837 SM00463 Small MutS-related domain SPy_1837 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPy_1837 SM00534 ATPase domain of DNA mismatch repair MUTS family SPy_1844 SM00382 ATPases associated with a variety of cellular activities SPy_1857 SM00419 helix_turn_helix, cAMP Regulatory protein SPy_1858 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPy_1858 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPy_1861 SM00530 Helix-turn-helix XRE-family like proteins SPy_1863 SM00422 helix_turn_helix, mercury resistance SPy_1864 SM00479 SPy_1864 SPy_1867 SM01133 SPy_1867 SPy_1870 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_1876 SM00849 Metallo-beta-lactamase superfamily SPy_1877 SM01230 SPy_1877 SPy_1878 SM00422 helix_turn_helix, mercury resistance SPy_1884 SM00244 prohibitin homologues SPy_1885 SM01120 SPy_1885 SPy_1885 SM01121 SPy_1885 SPy_1904 SM00487 DEAD-like helicases superfamily SPy_1908 SM00421 helix_turn_helix, Lux Regulon SPy_1908 SM00448 cheY-homologous receiver domain SPy_1912 SM00382 ATPases associated with a variety of cellular activities SPy_1919 SM01133 SPy_1919 SPy_1924 SM00420 helix_turn_helix, Deoxyribose operon repressor SPy_1924 SM01134 SPy_1924 SPy_1934 SM00530 Helix-turn-helix XRE-family like proteins SPy_1938 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPy_1941 SM00840 SPy_1941 SPy_1946 SM00316 Ribosomal protein S1-like RNA-binding domain SPy_1946 SM00322 K homology RNA-binding domain SPy_1955 SM01387 SPy_1955 SPy_1960 SM00347 helix_turn_helix multiple antibiotic resistance protein SPy_1961 SM00479 SPy_1961 SPy_1961 SM00481 DNA polymerase alpha chain like domain SPy_1968 SM01323 SPy_1968 SPy_1972 SM00642 Alpha-amylase domain SPy_1973 SM00642 Alpha-amylase domain SPy_1976 SM00382 ATPases associated with a variety of cellular activities SPy_1981 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPy_1981 SM00954 Region found in RelA / SpoT proteins SPy_1992 SM00382 ATPases associated with a variety of cellular activities SPy_2003 SM00382 ATPases associated with a variety of cellular activities SPy_2004 SM00382 ATPases associated with a variety of cellular activities SPy_2026 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPy_2026 SM00387 Histidine kinase-like ATPases SPy_2026 SM00388 His Kinase A (phosphoacceptor) domain SPy_2027 SM00448 cheY-homologous receiver domain SPy_2027 SM00862 Transcriptional regulatory protein, C terminal SPy_2031 SM00382 ATPases associated with a variety of cellular activities SPy_2043 SM00892 DNA/RNA non-specific endonuclease SPy_2054 SM00420 helix_turn_helix, Deoxyribose operon repressor SPy_2054 SM01134 SPy_2054 SPy_2072 SM00883 Chaperonin 10 Kd subunit SPy_2073 SM00382 ATPases associated with a variety of cellular activities SPy_2073 SM01086 C-terminal, D2-small domain, of ClpB protein SPy_2077 SM00357 Cold shock protein domain SPy_2083 SM01221 SPy_2083 SPy_2083 SM01222 SPy_2083 SPy_2091 SM00028 Tetratricopeptide repeats SPy_2091 SM01043 Bacterial transcriptional activator domain SPy_2096 SM00642 Alpha-amylase domain SPy_2099 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPy_2099 SM00866 SPy_2099 SPy_2113 SM00732 Likely ribonuclease with RNase H fold. SPy_2116 SM00382 ATPases associated with a variety of cellular activities SPy_2117 SM00852 Probable molybdopterin binding domain SPy_2119 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPy_2121 SM00853 MutL C terminal dimerisation domain SPy_2121 SM01340 SPy_2121 SPy_2125 SM00530 Helix-turn-helix XRE-family like proteins SPy_2126 SM00530 Helix-turn-helix XRE-family like proteins SPy_2127 SM01040 BRO family, N-terminal domain SPy_2128 SM01040 BRO family, N-terminal domain SPy_2135 SM00942 Primase C terminal 1 (PriCT-1) SPy_2136 SM00885 D5 N terminal like SPy_2148 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPy_2148 SM00534 ATPase domain of DNA mismatch repair MUTS family SPy_2151 SM00836 DALR anticodon binding domain SPy_2151 SM01016 Arginyl tRNA synthetase N terminal dom SPy_2163 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPy_2178 SM00363 S4 RNA-binding domain SPy_2178 SM01390 SPy_2178 SPy_2185 SM01228 SPy_2185 SPy_2194 SM00382 ATPases associated with a variety of cellular activities SPy_2195 SM00382 ATPases associated with a variety of cellular activities SPy_2201 SM00984 UDP binding domain SPy_2206 SM00116 Domain in cystathionine beta-synthase and other proteins. SPy_2206 SM01240 SPy_2206 SPy_2210 SM00382 ATPases associated with a variety of cellular activities SPy_2216 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPy_2217 SM00470 ParB-like nuclease domain