locus-tag class description M3B_RS00005 PF00308 Bacterial dnaA protein M3B_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix M3B_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M3B_RS00010 PF02767 DNA polymerase III beta subunit, central domain M3B_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M3B_RS00020 PF06071 Protein of unknown function (DUF933) M3B_RS00020 PF01926 50S ribosome-binding GTPase M3B_RS00025 PF01195 Peptidyl-tRNA hydrolase M3B_RS00030 PF17757 UvrB interaction domain M3B_RS00030 PF00271 Helicase conserved C-terminal domain M3B_RS00030 PF00270 DEAD/DEAH box helicase M3B_RS00030 PF02559 CarD-like/TRCF domain M3B_RS00030 PF03461 TRCF domain M3B_RS00035 PF01479 S4 domain M3B_RS00050 PF01171 PP-loop family M3B_RS00055 PF00156 Phosphoribosyl transferase domain M3B_RS00060 PF01434 Peptidase family M41 M3B_RS00060 PF06480 FtsH Extracellular M3B_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) M3B_RS00060 PF17862 AAA+ lid domain M3B_RS00065 PF13520 Amino acid permease M3B_RS00175 PF01476 LysM domain M3B_RS00175 PF05257 CHAP domain M3B_RS00180 PF14572 Phosphoribosyl synthetase-associated domain M3B_RS00180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M3B_RS00185 PF11967 Recombination protein O N terminal M3B_RS00185 PF02565 Recombination protein O C terminal M3B_RS00190 PF02504 Fatty acid synthesis protein M3B_RS00195 PF00550 Phosphopantetheine attachment site M3B_RS00200 PF01259 SAICAR synthetase M3B_RS00205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M3B_RS00205 PF02769 AIR synthase related protein, C-terminal domain M3B_RS00205 PF00586 AIR synthase related protein, N-terminal domain M3B_RS00210 PF13537 Glutamine amidotransferase domain M3B_RS00210 PF00156 Phosphoribosyl transferase domain M3B_RS00215 PF02769 AIR synthase related protein, C-terminal domain M3B_RS00215 PF00586 AIR synthase related protein, N-terminal domain M3B_RS00220 PF00551 Formyl transferase M3B_RS00225 PF01808 AICARFT/IMPCHase bienzyme M3B_RS00225 PF02142 MGS-like domain M3B_RS00235 PF02844 Phosphoribosylglycinamide synthetase, N domain M3B_RS00235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M3B_RS00235 PF02843 Phosphoribosylglycinamide synthetase, C domain M3B_RS00240 PF00731 AIR carboxylase M3B_RS00245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M3B_RS00245 PF02222 ATP-grasp domain M3B_RS00255 PF00206 Lyase M3B_RS00255 PF10397 Adenylosuccinate lyase C-terminus M3B_RS00265 PF05491 RuvB C-terminal winged helix domain M3B_RS00265 PF05496 Holliday junction DNA helicase RuvB P-loop domain M3B_RS00265 PF17864 RuvB AAA lid domain M3B_RS00270 PF01451 Low molecular weight phosphotyrosine protein phosphatase M3B_RS00280 PF01757 Acyltransferase family M3B_RS00285 PF00465 Iron-containing alcohol dehydrogenase M3B_RS00285 PF00171 Aldehyde dehydrogenase family M3B_RS00290 PF00107 Zinc-binding dehydrogenase M3B_RS00290 PF08240 Alcohol dehydrogenase GroES-like domain M3B_RS00295 PF01554 MatE M3B_RS00300 PF00338 Ribosomal protein S10p/S20e M3B_RS00305 PF00297 Ribosomal protein L3 M3B_RS00310 PF00573 Ribosomal protein L4/L1 family M3B_RS00315 PF00276 Ribosomal protein L23 M3B_RS00320 PF00181 Ribosomal Proteins L2, RNA binding domain M3B_RS00320 PF03947 Ribosomal Proteins L2, C-terminal domain M3B_RS00325 PF00203 Ribosomal protein S19 M3B_RS00330 PF00237 Ribosomal protein L22p/L17e M3B_RS00335 PF07650 KH domain M3B_RS00335 PF00189 Ribosomal protein S3, C-terminal domain M3B_RS00340 PF00252 Ribosomal protein L16p/L10e M3B_RS00345 PF00831 Ribosomal L29 protein M3B_RS00350 PF00366 Ribosomal protein S17 M3B_RS00355 PF00238 Ribosomal protein L14p/L23e M3B_RS00360 PF00467 KOW motif M3B_RS00360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M3B_RS00365 PF00673 ribosomal L5P family C-terminus M3B_RS00365 PF00281 Ribosomal protein L5 M3B_RS00370 PF00253 Ribosomal protein S14p/S29e M3B_RS00375 PF00410 Ribosomal protein S8 M3B_RS00380 PF00347 Ribosomal protein L6 M3B_RS00385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M3B_RS00390 PF00333 Ribosomal protein S5, N-terminal domain M3B_RS00390 PF03719 Ribosomal protein S5, C-terminal domain M3B_RS00395 PF00327 Ribosomal protein L30p/L7e M3B_RS00400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M3B_RS00405 PF00344 SecY translocase M3B_RS00415 PF01176 Translation initiation factor 1A / IF-1 M3B_RS00420 PF00444 Ribosomal protein L36 M3B_RS00425 PF00416 Ribosomal protein S13/S18 M3B_RS00430 PF00411 Ribosomal protein S11 M3B_RS00435 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M3B_RS00435 PF01000 RNA polymerase Rpb3/RpoA insert domain M3B_RS00435 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M3B_RS00440 PF01196 Ribosomal protein L17 M3B_RS00530 PF08544 GHMP kinases C terminal M3B_RS00530 PF00288 GHMP kinases N terminal domain M3B_RS00535 PF00288 GHMP kinases N terminal domain M3B_RS00535 PF08544 GHMP kinases C terminal M3B_RS00540 PF00288 GHMP kinases N terminal domain M3B_RS00540 PF08544 GHMP kinases C terminal M3B_RS00545 PF01047 MarR family M3B_RS00550 PF00005 ABC transporter M3B_RS00555 PF00950 ABC 3 transport family M3B_RS00565 PF00579 tRNA synthetases class I (W and Y) M3B_RS00565 PF01479 S4 domain M3B_RS00570 PF00905 Penicillin binding protein transpeptidase domain M3B_RS00570 PF00912 Transglycosylase M3B_RS00575 PF04563 RNA polymerase beta subunit M3B_RS00575 PF04561 RNA polymerase Rpb2, domain 2 M3B_RS00575 PF00562 RNA polymerase Rpb2, domain 6 M3B_RS00575 PF10385 RNA polymerase beta subunit external 1 domain M3B_RS00575 PF04565 RNA polymerase Rpb2, domain 3 M3B_RS00575 PF04560 RNA polymerase Rpb2, domain 7 M3B_RS00580 PF04983 RNA polymerase Rpb1, domain 3 M3B_RS00580 PF04998 RNA polymerase Rpb1, domain 5 M3B_RS00580 PF00623 RNA polymerase Rpb1, domain 2 M3B_RS00580 PF04997 RNA polymerase Rpb1, domain 1 M3B_RS00580 PF05000 RNA polymerase Rpb1, domain 4 M3B_RS00590 PF00437 Type II/IV secretion system protein M3B_RS00595 PF00482 Type II secretion system (T2SS), protein F M3B_RS00600 PF07963 Prokaryotic N-terminal methylation motif M3B_RS00630 PF00871 Acetokinase family M3B_RS00640 PF14748 Pyrroline-5-carboxylate reductase dimerisation M3B_RS00640 PF03807 NADP oxidoreductase coenzyme F420-dependent M3B_RS00645 PF05343 M42 glutamyl aminopeptidase M3B_RS00660 PF00085 Thioredoxin M3B_RS00665 PF01588 Putative tRNA binding domain M3B_RS00665 PF14794 Domain of unknown function (DUF4479) M3B_RS00670 PF00436 Single-strand binding protein family M3B_RS00680 PF01712 Deoxynucleoside kinase M3B_RS00685 PF01207 Dihydrouridine synthase (Dus) M3B_RS00690 PF01430 Hsp33 protein M3B_RS00700 PF08341 Thioester domain M3B_RS00700 PF17802 Prealbumin-like fold domain M3B_RS00710 PF12892 Spy0128-like isopeptide containing domain M3B_RS00715 PF04203 Sortase domain M3B_RS00730 PF17802 Prealbumin-like fold domain M3B_RS00730 PF08341 Thioester domain M3B_RS00740 PF02667 Short chain fatty acid transporter M3B_RS00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3B_RS00745 PF03466 LysR substrate binding domain M3B_RS00750 PF02803 Thiolase, C-terminal domain M3B_RS00750 PF00108 Thiolase, N-terminal domain M3B_RS00755 PF01144 Coenzyme A transferase M3B_RS00760 PF01144 Coenzyme A transferase M3B_RS00770 PF01042 Endoribonuclease L-PSP M3B_RS00785 PF01496 V-type ATPase 116kDa subunit family M3B_RS00790 PF00137 ATP synthase subunit C M3B_RS00800 PF01992 ATP synthase (C/AC39) subunit M3B_RS00805 PF01990 ATP synthase (F/14-kDa) subunit M3B_RS00810 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3B_RS00810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3B_RS00810 PF16886 ATPsynthase alpha/beta subunit N-term extension M3B_RS00815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3B_RS00815 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3B_RS00820 PF01813 ATP synthase subunit D M3B_RS00835 PF00709 Adenylosuccinate synthetase M3B_RS00840 PF02608 ABC transporter substrate-binding protein PnrA-like M3B_RS00845 PF00467 KOW motif M3B_RS00845 PF02357 Transcription termination factor nusG M3B_RS00860 PF17440 Thiol-activated cytolysin beta sandwich domain M3B_RS00860 PF01289 Thiol-activated cytolysin M3B_RS00880 PF01053 Cys/Met metabolism PLP-dependent enzyme M3B_RS00885 PF00133 tRNA synthetases class I (I, L, M and V) M3B_RS00885 PF09334 tRNA synthetases class I (M) M3B_RS00885 PF08264 Anticodon-binding domain of tRNA M3B_RS00885 PF13603 Leucyl-tRNA synthetase, Domain 2 M3B_RS00890 PF03611 PTS system sugar-specific permease component M3B_RS00895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS00900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M3B_RS00905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M3B_RS00910 PF01261 Xylose isomerase-like TIM barrel M3B_RS00915 PF00596 Class II Aldolase and Adducin N-terminal domain M3B_RS00935 PF00571 CBS domain M3B_RS00935 PF00005 ABC transporter M3B_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS00945 PF00476 DNA polymerase family A M3B_RS00945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M3B_RS00945 PF01367 5'-3' exonuclease, C-terminal SAM fold M3B_RS00955 PF01475 Ferric uptake regulator family M3B_RS00970 PF01702 Queuine tRNA-ribosyltransferase M3B_RS00980 PF02632 BioY family M3B_RS00985 PF12706 Beta-lactamase superfamily domain M3B_RS00990 PF14437 MafB19-like deaminase M3B_RS01005 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain M3B_RS01005 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain M3B_RS01010 PF00342 Phosphoglucose isomerase M3B_RS01020 PF01694 Rhomboid family M3B_RS01025 PF00483 Nucleotidyl transferase M3B_RS01030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M3B_RS01030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M3B_RS01040 PF00005 ABC transporter M3B_RS01040 PF00664 ABC transporter transmembrane region M3B_RS01045 PF00664 ABC transporter transmembrane region M3B_RS01045 PF00005 ABC transporter M3B_RS01050 PF02677 Epoxyqueuosine reductase QueH M3B_RS01055 PF00692 dUTPase M3B_RS01060 PF18073 Rubredoxin metal binding domain M3B_RS01065 PF00484 Carbonic anhydrase M3B_RS01070 PF01987 Mitochondrial biogenesis AIM24 M3B_RS01075 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3B_RS01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS01080 PF17203 Single cache domain 3 M3B_RS01080 PF00989 PAS fold M3B_RS01080 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M3B_RS01095 PF00825 Ribonuclease P M3B_RS01100 PF02096 60Kd inner membrane protein M3B_RS01105 PF14804 Jag N-terminus M3B_RS01105 PF01424 R3H domain M3B_RS01110 PF00468 Ribosomal protein L34 M3B_RS01115 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M3B_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS01145 PF00701 Dihydrodipicolinate synthetase family M3B_RS01150 PF00480 ROK family M3B_RS01160 PF01026 TatD related DNase M3B_RS01165 PF13331 Domain of unknown function (DUF4093) M3B_RS01170 PF00398 Ribosomal RNA adenine dimethylase M3B_RS01175 PF03193 RsgA GTPase M3B_RS01175 PF16745 RsgA N-terminal domain M3B_RS01180 PF00834 Ribulose-phosphate 3 epimerase family M3B_RS01185 PF04263 Thiamin pyrophosphokinase, catalytic domain M3B_RS01185 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M3B_RS01190 PF02646 RmuC family M3B_RS01195 PF01966 HD domain M3B_RS01200 PF00156 Phosphoribosyl transferase domain M3B_RS01200 PF09182 Bacterial purine repressor, N-terminal M3B_RS01210 PF00164 Ribosomal protein S12/S23 M3B_RS01215 PF00177 Ribosomal protein S7p/S5e M3B_RS01220 PF14492 Elongation Factor G, domain II M3B_RS01220 PF00009 Elongation factor Tu GTP binding domain M3B_RS01220 PF03144 Elongation factor Tu domain 2 M3B_RS01220 PF00679 Elongation factor G C-terminus M3B_RS01220 PF03764 Elongation factor G, domain IV M3B_RS01225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M3B_RS01225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3B_RS01235 PF00005 ABC transporter M3B_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS01250 PF02673 Bacitracin resistance protein BacA M3B_RS01255 PF05389 Negative regulator of genetic competence (MecA) M3B_RS01260 PF00953 Glycosyl transferase family 4 M3B_RS01265 PF00005 ABC transporter M3B_RS01270 PF01458 Uncharacterized protein family (UPF0051) M3B_RS01275 PF00266 Aminotransferase class-V M3B_RS01280 PF01592 NifU-like N terminal domain M3B_RS01285 PF01458 Uncharacterized protein family (UPF0051) M3B_RS01290 PF07943 Penicillin-binding protein 5, C-terminal domain M3B_RS01290 PF00768 D-alanyl-D-alanine carboxypeptidase M3B_RS01295 PF07943 Penicillin-binding protein 5, C-terminal domain M3B_RS01295 PF00768 D-alanyl-D-alanine carboxypeptidase M3B_RS01300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3B_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS01310 PF12911 N-terminal TM domain of oligopeptide transport permease C M3B_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS01315 PF00005 ABC transporter M3B_RS01315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3B_RS01320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3B_RS01320 PF00005 ABC transporter M3B_RS01365 PF01416 tRNA pseudouridine synthase M3B_RS01370 PF08543 Phosphomethylpyrimidine kinase M3B_RS01375 PF07155 ECF-type riboflavin transporter, S component M3B_RS01380 PF04260 Protein of unknown function (DUF436) M3B_RS01385 PF00924 Mechanosensitive ion channel M3B_RS01390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3B_RS01390 PF05698 Bacterial trigger factor protein (TF) C-terminus M3B_RS01390 PF05697 Bacterial trigger factor protein (TF) M3B_RS01395 PF05066 HB1, ASXL, restriction endonuclease HTH domain M3B_RS01400 PF06418 CTP synthase N-terminus M3B_RS01400 PF00117 Glutamine amidotransferase class-I M3B_RS01415 PF01116 Fructose-bisphosphate aldolase class-II M3B_RS01420 PF00830 Ribosomal L28 family M3B_RS01425 PF03780 Asp23 family, cell envelope-related function M3B_RS01430 PF02734 DAK2 domain M3B_RS01430 PF13684 Dihydroxyacetone kinase family M3B_RS01440 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) M3B_RS01445 PF00162 Phosphoglycerate kinase M3B_RS01455 PF13411 MerR HTH family regulatory protein M3B_RS01460 PF00120 Glutamine synthetase, catalytic domain M3B_RS01460 PF03951 Glutamine synthetase, beta-Grasp domain M3B_RS01465 PF17770 Ribonuclease J C-terminal domain M3B_RS01465 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M3B_RS01465 PF00753 Metallo-beta-lactamase superfamily M3B_RS01470 PF07288 Protein of unknown function (DUF1447) M3B_RS01475 PF00814 Glycoprotease family M3B_RS01480 PF00583 Acetyltransferase (GNAT) family M3B_RS01485 PF00814 Glycoprotease family M3B_RS01490 PF00253 Ribosomal protein S14p/S29e M3B_RS01500 PF01048 Phosphorylase superfamily M3B_RS01505 PF01773 Na+ dependent nucleoside transporter N-terminus M3B_RS01505 PF07662 Na+ dependent nucleoside transporter C-terminus M3B_RS01505 PF07670 Nucleoside recognition M3B_RS01510 PF01791 DeoC/LacD family aldolase M3B_RS01520 PF04394 Protein of unknown function, DUF536 M3B_RS01520 PF08279 HTH domain M3B_RS01530 PF07739 TipAS antibiotic-recognition domain M3B_RS01530 PF13411 MerR HTH family regulatory protein M3B_RS01535 PF02575 YbaB/EbfC DNA-binding family M3B_RS01550 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal M3B_RS01550 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain M3B_RS01550 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M3B_RS01555 PF13545 Crp-like helix-turn-helix domain M3B_RS01560 PF07690 Major Facilitator Superfamily M3B_RS01570 PF00230 Major intrinsic protein M3B_RS01585 PF00144 Beta-lactamase M3B_RS01590 PF01228 Glycine radical M3B_RS01590 PF02901 Pyruvate formate lyase-like M3B_RS01595 PF11798 IMS family HHH motif M3B_RS01595 PF00817 impB/mucB/samB family M3B_RS01595 PF11799 impB/mucB/samB family C-terminal domain M3B_RS01605 PF14490 Helix-hairpin-helix containing domain M3B_RS01605 PF13538 UvrD-like helicase C-terminal domain M3B_RS01605 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M3B_RS01610 PF10502 Signal peptidase, peptidase S26 M3B_RS01615 PF01351 Ribonuclease HII M3B_RS01615 PF11858 Domain of unknown function (DUF3378) M3B_RS01630 PF00488 MutS domain V M3B_RS01630 PF01713 Smr domain M3B_RS01640 PF00085 Thioredoxin M3B_RS01645 PF01381 Helix-turn-helix M3B_RS01650 PF14815 NUDIX domain M3B_RS01650 PF00730 HhH-GPD superfamily base excision DNA repair protein M3B_RS01660 PF01250 Ribosomal protein S6 M3B_RS01665 PF00436 Single-strand binding protein family M3B_RS01670 PF01084 Ribosomal protein S18 M3B_RS01685 PF17755 UvrA DNA-binding domain M3B_RS01685 PF17760 UvrA interaction domain M3B_RS01685 PF00005 ABC transporter M3B_RS01690 PF00557 Metallopeptidase family M24 M3B_RS01690 PF01321 Creatinase/Prolidase N-terminal domain M3B_RS01695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M3B_RS01700 PF09285 Elongation factor P, C-terminal M3B_RS01700 PF08207 Elongation factor P (EF-P) KOW-like domain M3B_RS01700 PF01132 Elongation factor P (EF-P) OB domain M3B_RS01705 PF03780 Asp23 family, cell envelope-related function M3B_RS01710 PF01029 NusB family M3B_RS01715 PF00356 Bacterial regulatory proteins, lacI family M3B_RS01720 PF08244 Glycosyl hydrolases family 32 C terminal M3B_RS01720 PF00251 Glycosyl hydrolases family 32 N-terminal domain M3B_RS01725 PF02378 Phosphotransferase system, EIIC M3B_RS01725 PF00367 phosphotransferase system, EIIB M3B_RS01725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M3B_RS01735 PF00480 ROK family M3B_RS01740 PF01238 Phosphomannose isomerase type I M3B_RS01745 PF02810 SEC-C motif M3B_RS01745 PF01043 SecA preprotein cross-linking domain M3B_RS01745 PF07516 SecA Wing and Scaffold domain M3B_RS01745 PF07517 SecA DEAD-like domain M3B_RS01750 PF01648 4'-phosphopantetheinyl transferase superfamily M3B_RS01755 PF01168 Alanine racemase, N-terminal domain M3B_RS01755 PF00842 Alanine racemase, C-terminal domain M3B_RS01760 PF01476 LysM domain M3B_RS01760 PF05257 CHAP domain M3B_RS01770 PF01497 Periplasmic binding protein M3B_RS01775 PF01032 FecCD transport family M3B_RS01780 PF00005 ABC transporter M3B_RS01785 PF00005 ABC transporter M3B_RS01785 PF00664 ABC transporter transmembrane region M3B_RS01790 PF00005 ABC transporter M3B_RS01790 PF00664 ABC transporter transmembrane region M3B_RS01805 PF00005 ABC transporter M3B_RS01815 PF17191 RecG wedge domain M3B_RS01815 PF00271 Helicase conserved C-terminal domain M3B_RS01815 PF00270 DEAD/DEAH box helicase M3B_RS01820 PF00005 ABC transporter M3B_RS01830 PF00710 Asparaginase, N-terminal M3B_RS01830 PF17763 Glutaminase/Asparaginase C-terminal domain M3B_RS01845 PF00155 Aminotransferase class I and II M3B_RS01850 PF06018 CodY GAF-like domain M3B_RS01850 PF08222 CodY helix-turn-helix domain M3B_RS01855 PF00857 Isochorismatase family M3B_RS01865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M3B_RS01865 PF00391 PEP-utilising enzyme, mobile domain M3B_RS01865 PF02896 PEP-utilising enzyme, TIM barrel domain M3B_RS01870 PF02686 Glu-tRNAGln amidotransferase C subunit M3B_RS01875 PF01425 Amidase M3B_RS01880 PF02637 GatB domain M3B_RS01880 PF02934 GatB/GatE catalytic domain M3B_RS01890 PF04226 Transglycosylase associated protein M3B_RS01895 PF00300 Histidine phosphatase superfamily (branch 1) M3B_RS01910 PF01628 HrcA protein C terminal domain M3B_RS01910 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding M3B_RS01915 PF01025 GrpE M3B_RS01920 PF00012 Hsp70 protein M3B_RS01925 PF00226 DnaJ domain M3B_RS01925 PF00684 DnaJ central domain M3B_RS01925 PF01556 DnaJ C terminal domain M3B_RS01930 PF00378 Enoyl-CoA hydratase/isomerase M3B_RS01940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M3B_RS01940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M3B_RS01945 PF00550 Phosphopantetheine attachment site M3B_RS01950 PF03060 Nitronate monooxygenase M3B_RS01955 PF00698 Acyl transferase domain M3B_RS01965 PF02801 Beta-ketoacyl synthase, C-terminal domain M3B_RS01965 PF00109 Beta-ketoacyl synthase, N-terminal domain M3B_RS01970 PF00364 Biotin-requiring enzyme M3B_RS01975 PF07977 FabA-like domain M3B_RS01980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3B_RS01980 PF02785 Biotin carboxylase C-terminal domain M3B_RS01980 PF00289 Biotin carboxylase, N-terminal domain M3B_RS01985 PF17848 Acetyl-coA carboxylase zinc finger domain M3B_RS01985 PF01039 Carboxyl transferase domain M3B_RS01990 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M3B_RS01995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3B_RS01995 PF02403 Seryl-tRNA synthetase N-terminal domain M3B_RS02005 PF13808 DDE_Tnp_1-associated M3B_RS02005 PF01609 Transposase DDE domain M3B_RS02015 PF03613 PTS system mannose/fructose/sorbose family IID component M3B_RS02020 PF03609 PTS system sorbose-specific iic component M3B_RS02025 PF03610 PTS system fructose IIA component M3B_RS02025 PF03830 PTS system sorbose subfamily IIB component M3B_RS02035 PF00860 Permease family M3B_RS02040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M3B_RS02050 PF03816 Cell envelope-related transcriptional attenuator domain M3B_RS02060 PF01230 HIT domain M3B_RS02065 PF00005 ABC transporter M3B_RS02070 PF05975 Bacterial ABC transporter protein EcsB M3B_RS02080 PF02390 Putative methyltransferase M3B_RS02090 PF17384 RimP C-terminal SH3 domain M3B_RS02090 PF02576 RimP N-terminal domain M3B_RS02095 PF13184 NusA-like KH domain M3B_RS02095 PF08529 NusA N-terminal domain M3B_RS02095 PF00575 S1 RNA binding domain M3B_RS02100 PF04296 Protein of unknown function (DUF448) M3B_RS02105 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M3B_RS02110 PF04760 Translation initiation factor IF-2, N-terminal region M3B_RS02110 PF11987 Translation-initiation factor 2 M3B_RS02110 PF00009 Elongation factor Tu GTP binding domain M3B_RS02115 PF02033 Ribosome-binding factor A M3B_RS02120 PF07859 alpha/beta hydrolase fold M3B_RS02125 PF03965 Penicillinase repressor M3B_RS02130 PF00403 Heavy-metal-associated domain M3B_RS02145 PF00455 DeoR C terminal sensor domain M3B_RS02145 PF08220 DeoR-like helix-turn-helix domain M3B_RS02170 PF02502 Ribose/Galactose Isomerase M3B_RS02175 PF02502 Ribose/Galactose Isomerase M3B_RS02185 PF01791 DeoC/LacD family aldolase M3B_RS02190 PF03458 UPF0126 domain M3B_RS02200 PF00440 Bacterial regulatory proteins, tetR family M3B_RS02205 PF02645 Uncharacterised protein, DegV family COG1307 M3B_RS02215 PF02690 Na+/Pi-cotransporter M3B_RS02220 PF01979 Amidohydrolase family M3B_RS02225 PF00248 Aldo/keto reductase family M3B_RS02230 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M3B_RS02240 PF02091 Glycyl-tRNA synthetase alpha subunit M3B_RS02245 PF02092 Glycyl-tRNA synthetase beta subunit M3B_RS02250 PF05979 Bacterial protein of unknown function (DUF896) M3B_RS02255 PF03413 Peptidase propeptide and YPEB domain M3B_RS02265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M3B_RS02265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M3B_RS02270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M3B_RS02270 PF01266 FAD dependent oxidoreductase M3B_RS02275 PF00230 Major intrinsic protein M3B_RS02280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3B_RS02280 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS02290 PF00923 Transaldolase/Fructose-6-phosphate aldolase M3B_RS02295 PF02779 Transketolase, pyrimidine binding domain M3B_RS02295 PF00456 Transketolase, thiamine diphosphate binding domain M3B_RS02295 PF02780 Transketolase, C-terminal domain M3B_RS02305 PF00005 ABC transporter M3B_RS02420 PF04466 Phage terminase large subunit M3B_RS02420 PF17288 Terminase RNAseH like domain M3B_RS02535 PF05257 CHAP domain M3B_RS02535 PF08460 Bacterial SH3 domain M3B_RS02535 PF01520 N-acetylmuramoyl-L-alanine amidase M3B_RS02555 PF00696 Amino acid kinase family M3B_RS02560 PF00171 Aldehyde dehydrogenase family M3B_RS02570 PF01795 MraW methylase family M3B_RS02585 PF00953 Glycosyl transferase family 4 M3B_RS02585 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M3B_RS02590 PF00270 DEAD/DEAH box helicase M3B_RS02590 PF00271 Helicase conserved C-terminal domain M3B_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS02600 PF00005 ABC transporter M3B_RS02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS02615 PF00324 Amino acid permease M3B_RS02620 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain M3B_RS02620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M3B_RS02620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M3B_RS02625 PF02540 NAD synthase M3B_RS02630 PF03051 Peptidase C1-like family M3B_RS02635 PF00912 Transglycosylase M3B_RS02635 PF00905 Penicillin binding protein transpeptidase domain M3B_RS02640 PF03838 Recombination protein U M3B_RS02645 PF06908 YspA SLOG family M3B_RS02650 PF05103 DivIVA protein M3B_RS02660 PF02926 THUMP domain M3B_RS02660 PF01170 Putative RNA methylase family UPF0020 M3B_RS02665 PF18041 MapZ extracellular domain 1 M3B_RS02665 PF18708 MapZ extracellular C-terminal domain 2 M3B_RS02670 PF02664 S-Ribosylhomocysteinase (LuxS) M3B_RS02685 PF01144 Coenzyme A transferase M3B_RS02695 PF02803 Thiolase, C-terminal domain M3B_RS02695 PF00108 Thiolase, N-terminal domain M3B_RS02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3B_RS02700 PF03466 LysR substrate binding domain M3B_RS02705 PF01966 HD domain M3B_RS02705 PF00013 KH domain M3B_RS02705 PF12072 Domain of unknown function (DUF3552) M3B_RS02710 PF00625 Guanylate kinase M3B_RS02715 PF01192 RNA polymerase Rpb6 M3B_RS02720 PF04851 Type III restriction enzyme, res subunit M3B_RS02720 PF17764 3′ DNA-binding domain (3′BD) M3B_RS02720 PF00271 Helicase conserved C-terminal domain M3B_RS02720 PF18074 Primosomal protein N C-terminal domain M3B_RS02720 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M3B_RS02725 PF02911 Formyl transferase, C-terminal domain M3B_RS02725 PF00551 Formyl transferase M3B_RS02730 PF01029 NusB family M3B_RS02730 PF01189 16S rRNA methyltransferase RsmB/F M3B_RS02740 PF03793 PASTA domain M3B_RS02740 PF00069 Protein kinase domain M3B_RS02750 PF00672 HAMP domain M3B_RS02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS02750 PF07730 Histidine kinase M3B_RS02755 PF00196 Bacterial regulatory proteins, luxR family M3B_RS02755 PF00072 Response regulator receiver domain M3B_RS02760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3B_RS02765 PF00575 S1 RNA binding domain M3B_RS02770 PF00291 Pyridoxal-phosphate dependent enzyme M3B_RS02775 PF01205 Uncharacterized protein family UPF0029 M3B_RS02775 PF09186 Domain of unknown function (DUF1949) M3B_RS02790 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M3B_RS02790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M3B_RS02865 PF04167 Protein of unknown function (DUF402) M3B_RS02870 PF02631 RecX family M3B_RS02875 PF02899 Phage integrase, N-terminal SAM-like domain M3B_RS02875 PF00589 Phage integrase family M3B_RS03125 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain M3B_RS03125 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain M3B_RS03135 PF01938 TRAM domain M3B_RS03135 PF05958 tRNA (Uracil-5-)-methyltransferase M3B_RS03145 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 M3B_RS03145 PF07748 Glycosyl hydrolases family 38 C-terminal domain M3B_RS03145 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain M3B_RS03145 PF09261 Alpha mannosidase middle domain M3B_RS03145 PF01074 Glycosyl hydrolases family 38 N-terminal domain M3B_RS03155 PF00392 Bacterial regulatory proteins, gntR family M3B_RS03160 PF02838 Glycosyl hydrolase family 20, domain 2 M3B_RS03160 PF07555 beta-N-acetylglucosaminidase M3B_RS03165 PF00232 Glycosyl hydrolase family 1 M3B_RS03170 PF00480 ROK family M3B_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS03180 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS03185 PF12010 Domain of unknown function (DUF3502) M3B_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS03195 PF06580 Histidine kinase M3B_RS03195 PF02743 Cache domain M3B_RS03195 PF00672 HAMP domain M3B_RS03200 PF12833 Helix-turn-helix domain M3B_RS03200 PF00072 Response regulator receiver domain M3B_RS03205 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M3B_RS03205 PF00703 Glycosyl hydrolases family 2 M3B_RS03205 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M3B_RS03205 PF02837 Glycosyl hydrolases family 2, sugar binding domain M3B_RS03205 PF16355 Domain of unknown function (DUF4982) M3B_RS03210 PF08501 Shikimate dehydrogenase substrate binding domain M3B_RS03210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M3B_RS03215 PF13649 Methyltransferase domain M3B_RS03230 PF01761 3-dehydroquinate synthase M3B_RS03235 PF00793 DAHP synthetase I family M3B_RS03235 PF01817 Chorismate mutase type II M3B_RS03270 PF10458 Valyl tRNA synthetase tRNA binding arm M3B_RS03270 PF00133 tRNA synthetases class I (I, L, M and V) M3B_RS03270 PF08264 Anticodon-binding domain of tRNA M3B_RS03285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3B_RS03285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M3B_RS03295 PF02683 Cytochrome C biogenesis protein transmembrane region M3B_RS03300 PF08534 Redoxin M3B_RS03305 PF01625 Peptide methionine sulfoxide reductase M3B_RS03305 PF01641 SelR domain M3B_RS03325 PF01381 Helix-turn-helix M3B_RS03335 PF08346 AntA/AntB antirepressor M3B_RS03335 PF10548 P22AR C-terminal domain M3B_RS03370 PF07261 Replication initiation and membrane attachment M3B_RS03400 PF00436 Single-strand binding protein family M3B_RS03410 PF05866 Endodeoxyribonuclease RusA M3B_RS03475 PF02195 ParB-like nuclease domain M3B_RS03615 PF01520 N-acetylmuramoyl-L-alanine amidase M3B_RS03615 PF05257 CHAP domain M3B_RS03615 PF08460 Bacterial SH3 domain M3B_RS03630 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain M3B_RS03655 PF00072 Response regulator receiver domain M3B_RS03655 PF12833 Helix-turn-helix domain M3B_RS03660 PF02743 Cache domain M3B_RS03660 PF00672 HAMP domain M3B_RS03660 PF06580 Histidine kinase M3B_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS03675 PF02863 Arginine repressor, C-terminal domain M3B_RS03675 PF01316 Arginine repressor, DNA binding domain M3B_RS03690 PF13673 Acetyltransferase (GNAT) domain M3B_RS03695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3B_RS03695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3B_RS03700 PF03606 C4-dicarboxylate anaerobic carrier M3B_RS03705 PF01546 Peptidase family M20/M25/M40 M3B_RS03710 PF00696 Amino acid kinase family M3B_RS03715 PF03590 Aspartate-ammonia ligase M3B_RS03725 PF01467 Cytidylyltransferase-like M3B_RS03730 PF13180 PDZ domain M3B_RS03730 PF05362 Lon protease (S16) C-terminal proteolytic domain M3B_RS03735 PF00356 Bacterial regulatory proteins, lacI family M3B_RS03740 PF06265 Protein of unknown function (DUF1027) M3B_RS03745 PF04055 Radical SAM superfamily M3B_RS03755 PF00210 Ferritin-like domain M3B_RS03765 PF00480 ROK family M3B_RS03770 PF00581 Rhodanese-like domain M3B_RS03775 PF00679 Elongation factor G C-terminus M3B_RS03775 PF14492 Elongation Factor G, domain II M3B_RS03775 PF03144 Elongation factor Tu domain 2 M3B_RS03775 PF00009 Elongation factor Tu GTP binding domain M3B_RS03785 PF02875 Mur ligase family, glutamate ligase domain M3B_RS03785 PF08245 Mur ligase middle domain M3B_RS03790 PF03033 Glycosyltransferase family 28 N-terminal domain M3B_RS03790 PF04101 Glycosyltransferase family 28 C-terminal domain M3B_RS03795 PF08478 POTRA domain, FtsQ-type M3B_RS03800 PF11983 Membrane-attachment and polymerisation-promoting switch M3B_RS03800 PF02491 SHS2 domain inserted in FTSA M3B_RS03805 PF12327 FtsZ family, C-terminal domain M3B_RS03805 PF00091 Tubulin/FtsZ family, GTPase domain M3B_RS03810 PF01168 Alanine racemase, N-terminal domain M3B_RS03815 PF04472 Cell division protein SepF M3B_RS03825 PF17774 Putative RNA-binding domain in YlmH M3B_RS03825 PF01479 S4 domain M3B_RS03830 PF05103 DivIVA protein M3B_RS03835 PF00133 tRNA synthetases class I (I, L, M and V) M3B_RS03835 PF08264 Anticodon-binding domain of tRNA M3B_RS03845 PF00293 NUDIX domain M3B_RS03850 PF07724 AAA domain (Cdc48 subfamily) M3B_RS03850 PF00004 ATPase family associated with various cellular activities (AAA) M3B_RS03850 PF10431 C-terminal, D2-small domain, of ClpB protein M3B_RS03850 PF17871 AAA lid domain M3B_RS03855 PF08796 Protein of unknown function (DUF1797) M3B_RS03860 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS03865 PF00005 ABC transporter M3B_RS03870 PF03441 FAD binding domain of DNA photolyase M3B_RS03870 PF00875 DNA photolyase M3B_RS03875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3B_RS03875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3B_RS03875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3B_RS03875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3B_RS03880 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M3B_RS03880 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M3B_RS03885 PF02601 Exonuclease VII, large subunit M3B_RS03885 PF13742 OB-fold nucleic acid binding domain M3B_RS03890 PF02609 Exonuclease VII small subunit M3B_RS03895 PF00348 Polyprenyl synthetase M3B_RS03900 PF01479 S4 domain M3B_RS03900 PF01728 FtsJ-like methyltransferase M3B_RS03905 PF02863 Arginine repressor, C-terminal domain M3B_RS03905 PF01316 Arginine repressor, DNA binding domain M3B_RS03910 PF13476 AAA domain M3B_RS03920 PF02645 Uncharacterised protein, DegV family COG1307 M3B_RS03925 PF13472 GDSL-like Lipase/Acylhydrolase family M3B_RS03935 PF00216 Bacterial DNA-binding protein M3B_RS03940 PF14659 Phage integrase, N-terminal SAM-like domain M3B_RS03940 PF00589 Phage integrase family M3B_RS03950 PF01381 Helix-turn-helix M3B_RS04000 PF03837 RecT family M3B_RS04020 PF14284 PcfJ-like protein M3B_RS04175 PF05105 Bacteriophage holin family M3B_RS04200 PF01180 Dihydroorotate dehydrogenase M3B_RS04205 PF00300 Histidine phosphatase superfamily (branch 1) M3B_RS04210 PF08279 HTH domain M3B_RS04210 PF02829 3H domain M3B_RS04220 PF01226 Formate/nitrite transporter M3B_RS04225 PF03717 Penicillin-binding Protein dimerisation domain M3B_RS04225 PF00905 Penicillin binding protein transpeptidase domain M3B_RS04230 PF02132 RecR protein M3B_RS04230 PF13662 Toprim domain M3B_RS04235 PF01820 D-ala D-ala ligase N-terminus M3B_RS04235 PF07478 D-ala D-ala ligase C-terminus M3B_RS04240 PF08245 Mur ligase middle domain M3B_RS04240 PF01225 Mur ligase family, catalytic domain M3B_RS04240 PF02875 Mur ligase family, glutamate ligase domain M3B_RS04255 PF00009 Elongation factor Tu GTP binding domain M3B_RS04255 PF16658 Class II release factor RF3, C-terminal domain M3B_RS04255 PF03144 Elongation factor Tu domain 2 M3B_RS04260 PF00270 DEAD/DEAH box helicase M3B_RS04260 PF00271 Helicase conserved C-terminal domain M3B_RS04265 PF02705 K+ potassium transporter M3B_RS04270 PF01541 GIY-YIG catalytic domain M3B_RS04275 PF05175 Methyltransferase small domain M3B_RS04275 PF17827 PrmC N-terminal domain M3B_RS04280 PF01553 Acyltransferase M3B_RS04285 PF10531 SLBB domain M3B_RS04290 PF13567 Domain of unknown function (DUF4131) M3B_RS04290 PF00753 Metallo-beta-lactamase superfamily M3B_RS04290 PF03772 Competence protein M3B_RS04300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M3B_RS04300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M3B_RS04325 PF02547 Queuosine biosynthesis protein M3B_RS04330 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M3B_RS04335 PF00849 RNA pseudouridylate synthase M3B_RS04335 PF01479 S4 domain M3B_RS04345 PF08439 Oligopeptidase F M3B_RS04345 PF01432 Peptidase family M3 M3B_RS04350 PF07690 Major Facilitator Superfamily M3B_RS04355 PF01596 O-methyltransferase M3B_RS04360 PF13145 PPIC-type PPIASE domain M3B_RS04365 PF02272 DHHA1 domain M3B_RS04365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3B_RS04365 PF01411 tRNA synthetases class II (A) M3B_RS04370 PF01381 Helix-turn-helix M3B_RS04395 PF00268 Ribonucleotide reductase, small chain M3B_RS04400 PF00317 Ribonucleotide reductase, all-alpha domain M3B_RS04400 PF02867 Ribonucleotide reductase, barrel domain M3B_RS04400 PF08343 Ribonucleotide reductase N-terminal M3B_RS04405 PF00462 Glutaredoxin M3B_RS04410 PF00381 PTS HPr component phosphorylation site M3B_RS04415 PF00391 PEP-utilising enzyme, mobile domain M3B_RS04415 PF02896 PEP-utilising enzyme, TIM barrel domain M3B_RS04415 PF05524 PEP-utilising enzyme, N-terminal M3B_RS04420 PF00171 Aldehyde dehydrogenase family M3B_RS04425 PF01522 Polysaccharide deacetylase M3B_RS04425 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain M3B_RS04430 PF00271 Helicase conserved C-terminal domain M3B_RS04430 PF00270 DEAD/DEAH box helicase M3B_RS04435 PF00485 Phosphoribulokinase / Uridine kinase family M3B_RS04450 PF13185 GAF domain M3B_RS04455 PF12169 DNA polymerase III subunits gamma and tau domain III M3B_RS04465 PF03099 Biotin/lipoate A/B protein ligase family M3B_RS04465 PF02237 Biotin protein ligase C terminal domain M3B_RS04465 PF08279 HTH domain M3B_RS04475 PF02773 S-adenosylmethionine synthetase, C-terminal domain M3B_RS04475 PF02772 S-adenosylmethionine synthetase, central domain M3B_RS04475 PF00438 S-adenosylmethionine synthetase, N-terminal domain M3B_RS04480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3B_RS04485 PF01378 B domain M3B_RS04485 PF00746 LPXTG cell wall anchor motif M3B_RS04485 PF00746 LPXTG cell wall anchor motif M3B_RS04485 PF17573 GA-like domain M3B_RS04485 PF01378 B domain M3B_RS04485 PF17573 GA-like domain M3B_RS04490 PF13302 Acetyltransferase (GNAT) domain M3B_RS04495 PF00392 Bacterial regulatory proteins, gntR family M3B_RS04495 PF07085 DRTGG domain M3B_RS04495 PF00571 CBS domain M3B_RS04495 PF03061 Thioesterase superfamily M3B_RS04500 PF00557 Metallopeptidase family M24 M3B_RS04510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3B_RS04515 PF01202 Shikimate kinase M3B_RS04520 PF03816 Cell envelope-related transcriptional attenuator domain M3B_RS04525 PF05958 tRNA (Uracil-5-)-methyltransferase M3B_RS04525 PF01938 TRAM domain M3B_RS04540 PF08903 Domain of unknown function (DUF1846) M3B_RS04545 PF07690 Major Facilitator Superfamily M3B_RS04555 PF00849 RNA pseudouridylate synthase M3B_RS04555 PF01479 S4 domain M3B_RS04570 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M3B_RS04570 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M3B_RS04585 PF01926 50S ribosome-binding GTPase M3B_RS04585 PF01018 GTP1/OBG M3B_RS04585 PF09269 Domain of unknown function (DUF1967) M3B_RS04600 PF00232 Glycosyl hydrolase family 1 M3B_RS04615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS04620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M3B_RS04630 PF02378 Phosphotransferase system, EIIC M3B_RS04635 PF00005 ABC transporter M3B_RS04640 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3B_RS04645 PF17757 UvrB interaction domain M3B_RS04645 PF12344 Ultra-violet resistance protein B M3B_RS04645 PF04851 Type III restriction enzyme, res subunit M3B_RS04645 PF00271 Helicase conserved C-terminal domain M3B_RS04645 PF02151 UvrB/uvrC motif M3B_RS04655 PF13193 AMP-binding enzyme C-terminal domain M3B_RS04655 PF00501 AMP-binding enzyme M3B_RS04660 PF03062 MBOAT, membrane-bound O-acyltransferase family M3B_RS04665 PF00550 Phosphopantetheine attachment site M3B_RS04670 PF04914 DltD protein M3B_RS04675 PF00934 PE family M3B_RS04675 PF07859 alpha/beta hydrolase fold M3B_RS04695 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS04705 PF13416 Bacterial extracellular solute-binding protein M3B_RS04710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M3B_RS04710 PF00356 Bacterial regulatory proteins, lacI family M3B_RS04715 PF02446 4-alpha-glucanotransferase M3B_RS04720 PF00343 Carbohydrate phosphorylase M3B_RS04900 PF00574 Clp protease M3B_RS04985 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M3B_RS04985 PF13457 GW (Gly-Tryp) dipeptide domain M3B_RS05020 PF00334 Nucleoside diphosphate kinase M3B_RS05025 PF14492 Elongation Factor G, domain II M3B_RS05025 PF00679 Elongation factor G C-terminus M3B_RS05025 PF00009 Elongation factor Tu GTP binding domain M3B_RS05025 PF03144 Elongation factor Tu domain 2 M3B_RS05025 PF06421 GTP-binding protein LepA C-terminus M3B_RS05030 PF00746 LPXTG cell wall anchor motif M3B_RS05030 PF02370 M protein repeat M3B_RS05035 PF01641 SelR domain M3B_RS05040 PF03601 Conserved hypothetical protein 698 M3B_RS05050 PF03830 PTS system sorbose subfamily IIB component M3B_RS05055 PF03609 PTS system sorbose-specific iic component M3B_RS05060 PF03613 PTS system mannose/fructose/sorbose family IID component M3B_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS05065 PF06580 Histidine kinase M3B_RS05070 PF00072 Response regulator receiver domain M3B_RS05070 PF12833 Helix-turn-helix domain M3B_RS05080 PF00171 Aldehyde dehydrogenase family M3B_RS05085 PF01541 GIY-YIG catalytic domain M3B_RS05085 PF08459 UvrC Helix-hairpin-helix N-terminal M3B_RS05085 PF02151 UvrB/uvrC motif M3B_RS05090 PF00881 Nitroreductase family M3B_RS05095 PF01546 Peptidase family M20/M25/M40 M3B_RS05100 PF01926 50S ribosome-binding GTPase M3B_RS05100 PF12631 MnmE helical domain M3B_RS05100 PF10396 GTP-binding protein TrmE N-terminus M3B_RS05105 PF00466 Ribosomal protein L10 M3B_RS05110 PF16320 Ribosomal protein L7/L12 dimerisation domain M3B_RS05110 PF00542 Ribosomal protein L7/L12 C-terminal domain M3B_RS05115 PF00768 D-alanyl-D-alanine carboxypeptidase M3B_RS05115 PF07943 Penicillin-binding protein 5, C-terminal domain M3B_RS05125 PF02875 Mur ligase family, glutamate ligase domain M3B_RS05125 PF08245 Mur ligase middle domain M3B_RS05130 PF01227 GTP cyclohydrolase I M3B_RS05135 PF00809 Pterin binding enzyme M3B_RS05140 PF02152 Dihydroneopterin aldolase M3B_RS05145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M3B_RS05150 PF01565 FAD binding domain M3B_RS05150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M3B_RS05155 PF08402 TOBE domain M3B_RS05155 PF00005 ABC transporter M3B_RS05160 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS05165 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS05170 PF13416 Bacterial extracellular solute-binding protein M3B_RS05175 PF00072 Response regulator receiver domain M3B_RS05180 PF00989 PAS fold M3B_RS05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS05180 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M3B_RS05180 PF17203 Single cache domain 3 M3B_RS05185 PF03390 2-hydroxycarboxylate transporter family M3B_RS05190 PF00390 Malic enzyme, N-terminal domain M3B_RS05190 PF03949 Malic enzyme, NAD binding domain M3B_RS05195 PF08240 Alcohol dehydrogenase GroES-like domain M3B_RS05195 PF13823 Alcohol dehydrogenase GroES-associated M3B_RS05195 PF00107 Zinc-binding dehydrogenase M3B_RS05200 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) M3B_RS05205 PF00654 Voltage gated chloride channel M3B_RS05215 PF01594 AI-2E family transporter M3B_RS05220 PF04002 RadC-like JAB domain M3B_RS05225 PF07722 Peptidase C26 M3B_RS05230 PF02629 CoA binding domain M3B_RS05230 PF06971 Putative DNA-binding protein N-terminus M3B_RS05240 PF00266 Aminotransferase class-V M3B_RS05245 PF14572 Phosphoribosyl synthetase-associated domain M3B_RS05245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M3B_RS05255 PF04607 Region found in RelA / SpoT proteins M3B_RS05260 PF01513 ATP-NAD kinase M3B_RS05265 PF00849 RNA pseudouridylate synthase M3B_RS05265 PF01479 S4 domain M3B_RS05270 PF01515 Phosphate acetyl/butaryl transferase M3B_RS05285 PF00571 CBS domain M3B_RS05285 PF00005 ABC transporter M3B_RS05290 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS05295 PF00478 IMP dehydrogenase / GMP reductase domain M3B_RS05305 PF00156 Phosphoribosyl transferase domain M3B_RS05310 PF00860 Permease family M3B_RS05315 PF02424 ApbE family M3B_RS05320 PF01361 Tautomerase enzyme M3B_RS05325 PF00265 Thymidine kinase M3B_RS05330 PF00472 RF-1 domain M3B_RS05330 PF03462 PCRF domain M3B_RS05335 PF05175 Methyltransferase small domain M3B_RS05350 PF00464 Serine hydroxymethyltransferase M3B_RS05365 PF00005 ABC transporter M3B_RS05365 PF00664 ABC transporter transmembrane region M3B_RS05370 PF00664 ABC transporter transmembrane region M3B_RS05370 PF00005 ABC transporter M3B_RS05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS05375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3B_RS05380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M3B_RS05380 PF00056 lactate/malate dehydrogenase, NAD binding domain M3B_RS05385 PF00521 DNA gyrase/topoisomerase IV, subunit A M3B_RS05385 PF03989 DNA gyrase C-terminal domain, beta-propeller M3B_RS05390 PF04203 Sortase domain M3B_RS05395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3B_RS05415 PF03006 Haemolysin-III related M3B_RS05425 PF01926 50S ribosome-binding GTPase M3B_RS05430 PF01351 Ribonuclease HII M3B_RS05435 PF02481 DNA recombination-mediator protein A M3B_RS05435 PF18255 DNA processing protein A sterile alpha motif domain M3B_RS05440 PF01751 Toprim domain M3B_RS05440 PF01131 DNA topoisomerase M3B_RS05440 PF01396 Topoisomerase DNA binding C4 zinc finger M3B_RS05445 PF01134 Glucose inhibited division protein A M3B_RS05450 PF00364 Biotin-requiring enzyme M3B_RS05450 PF02436 Conserved carboxylase domain M3B_RS05450 PF00682 HMGL-like M3B_RS05460 PF00364 Biotin-requiring enzyme M3B_RS05465 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit M3B_RS05470 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M3B_RS05480 PF03600 Citrate transporter M3B_RS05490 PF00364 Biotin-requiring enzyme M3B_RS05495 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit M3B_RS05500 PF06857 Malonate decarboxylase delta subunit (MdcD) M3B_RS05505 PF03328 HpcH/HpaI aldolase/citrate lyase family M3B_RS05510 PF04223 Citrate lyase, alpha subunit (CitF) M3B_RS05515 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase M3B_RS05520 PF00364 Biotin-requiring enzyme M3B_RS05520 PF02436 Conserved carboxylase domain M3B_RS05520 PF00682 HMGL-like M3B_RS05525 PF08218 Citrate lyase ligase C-terminal domain M3B_RS05535 PF13495 Phage integrase, N-terminal SAM-like domain M3B_RS05535 PF00589 Phage integrase family M3B_RS05545 PF00448 SRP54-type protein, GTPase domain M3B_RS05545 PF02978 Signal peptide binding domain M3B_RS05545 PF02881 SRP54-type protein, helical bundle domain M3B_RS05550 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M3B_RS05555 PF07702 UTRA domain M3B_RS05555 PF00392 Bacterial regulatory proteins, gntR family M3B_RS05565 PF00117 Glutamine amidotransferase class-I M3B_RS05565 PF00958 GMP synthase C terminal domain M3B_RS05565 PF02540 NAD synthase M3B_RS05575 PF00005 ABC transporter M3B_RS05575 PF12848 ABC transporter M3B_RS05585 PF08543 Phosphomethylpyrimidine kinase M3B_RS05585 PF02581 Thiamine monophosphate synthase M3B_RS05590 PF00155 Aminotransferase class I and II M3B_RS05590 PF00392 Bacterial regulatory proteins, gntR family M3B_RS05595 PF13597 Anaerobic ribonucleoside-triphosphate reductase M3B_RS05595 PF03477 ATP cone domain M3B_RS05600 PF13091 PLD-like domain M3B_RS05605 PF01268 Formate--tetrahydrofolate ligase M3B_RS05610 PF03099 Biotin/lipoate A/B protein ligase family M3B_RS05610 PF10437 Bacterial lipoate protein ligase C-terminus M3B_RS05620 PF01661 Macro domain M3B_RS05625 PF01597 Glycine cleavage H-protein M3B_RS05630 PF00296 Luciferase-like monooxygenase M3B_RS05635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3B_RS05640 PF03099 Biotin/lipoate A/B protein ligase family M3B_RS05645 PF02441 Flavoprotein M3B_RS05645 PF04127 DNA / pantothenate metabolism flavoprotein M3B_RS05650 PF02441 Flavoprotein M3B_RS05655 PF12822 ECF transporter, substrate-specific component M3B_RS05660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3B_RS05660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3B_RS05660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3B_RS05660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3B_RS05665 PF02653 Branched-chain amino acid transport system / permease component M3B_RS05670 PF02653 Branched-chain amino acid transport system / permease component M3B_RS05675 PF00005 ABC transporter M3B_RS05680 PF02608 ABC transporter substrate-binding protein PnrA-like M3B_RS05685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M3B_RS05690 PF05175 Methyltransferase small domain M3B_RS05695 PF00485 Phosphoribulokinase / Uridine kinase family M3B_RS05700 PF01649 Ribosomal protein S20 M3B_RS05705 PF00512 His Kinase A (phospho-acceptor) domain M3B_RS05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS05710 PF00072 Response regulator receiver domain M3B_RS05710 PF00486 Transcriptional regulatory protein, C terminal M3B_RS05715 PF11838 ERAP1-like C-terminal domain M3B_RS05715 PF01433 Peptidase family M1 domain M3B_RS05725 PF01895 PhoU domain M3B_RS05730 PF00005 ABC transporter M3B_RS05735 PF00005 ABC transporter M3B_RS05740 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS05745 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS05750 PF12849 PBP superfamily domain M3B_RS05755 PF17126 RsmF rRNA methyltransferase first C-terminal domain M3B_RS05755 PF01189 16S rRNA methyltransferase RsmB/F M3B_RS05755 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF M3B_RS05760 PF00459 Inositol monophosphatase family M3B_RS05765 PF05256 Uncharacterised protein family (UPF0223) M3B_RS05770 PF03960 ArsC family M3B_RS05775 PF01687 Riboflavin kinase M3B_RS05775 PF06574 FAD synthetase M3B_RS05780 PF16198 tRNA pseudouridylate synthase B C-terminal domain M3B_RS05780 PF01509 TruB family pseudouridylate synthase (N terminal domain) M3B_RS05805 PF02687 FtsX-like permease family M3B_RS05805 PF12704 MacB-like periplasmic core domain M3B_RS05805 PF00005 ABC transporter M3B_RS05820 PF03780 Asp23 family, cell envelope-related function M3B_RS05825 PF05532 CsbD-like M3B_RS05830 PF03780 Asp23 family, cell envelope-related function M3B_RS05850 PF13361 UvrD-like helicase C-terminal domain M3B_RS05850 PF00580 UvrD/REP helicase N-terminal domain M3B_RS05855 PF01235 Sodium:alanine symporter family M3B_RS05860 PF01545 Cation efflux family M3B_RS05860 PF16916 Dimerisation domain of Zinc Transporter M3B_RS05865 PF07373 CAMP factor (Cfa) M3B_RS05870 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3B_RS05875 PF00005 ABC transporter M3B_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS05885 PF03831 PhnA domain M3B_RS05885 PF08274 PhnA Zinc-Ribbon M3B_RS05890 PF01380 SIS domain M3B_RS05895 PF10502 Signal peptidase, peptidase S26 M3B_RS05900 PF02887 Pyruvate kinase, alpha/beta domain M3B_RS05900 PF00224 Pyruvate kinase, barrel domain M3B_RS05905 PF00365 Phosphofructokinase M3B_RS05910 PF02811 PHP domain M3B_RS05910 PF07733 Bacterial DNA polymerase III alpha NTPase domain M3B_RS05910 PF01336 OB-fold nucleic acid binding domain M3B_RS05910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M3B_RS05910 PF14579 Helix-hairpin-helix motif M3B_RS05915 PF00392 Bacterial regulatory proteins, gntR family M3B_RS05920 PF00005 ABC transporter M3B_RS05945 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain M3B_RS05950 PF13784 Fic/DOC family N-terminal M3B_RS05950 PF02661 Fic/DOC family M3B_RS05955 PF08460 Bacterial SH3 domain M3B_RS05955 PF05257 CHAP domain M3B_RS05955 PF01520 N-acetylmuramoyl-L-alanine amidase M3B_RS06045 PF00574 Clp protease M3B_RS06090 PF00589 Phage integrase family M3B_RS06150 PF01695 IstB-like ATP binding protein M3B_RS06160 PF00772 DnaB-like helicase N terminal domain M3B_RS06160 PF03796 DnaB-like helicase C terminal domain M3B_RS06215 PF00589 Phage integrase family M3B_RS06220 PF09711 CRISPR-associated protein (Cas_Csn2) M3B_RS06225 PF09827 CRISPR associated protein Cas2 M3B_RS06230 PF01867 CRISPR associated protein Cas1 M3B_RS06235 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 M3B_RS06235 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 M3B_RS06235 PF13395 HNH endonuclease M3B_RS06235 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 M3B_RS06245 PF13344 Haloacid dehalogenase-like hydrolase M3B_RS06255 PF06969 HemN C-terminal domain M3B_RS06255 PF04055 Radical SAM superfamily M3B_RS06265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3B_RS06265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3B_RS06265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3B_RS06265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3B_RS06275 PF02457 DisA bacterial checkpoint controller nucleotide-binding M3B_RS06280 PF08245 Mur ligase middle domain M3B_RS06280 PF08353 Domain of unknown function (DUF1727) M3B_RS06285 PF07685 CobB/CobQ-like glutamine amidotransferase domain M3B_RS06290 PF03099 Biotin/lipoate A/B protein ligase family M3B_RS06290 PF10437 Bacterial lipoate protein ligase C-terminus M3B_RS06295 PF02278 Polysaccharide lyase family 8, super-sandwich domain M3B_RS06295 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M3B_RS06295 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain M3B_RS06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS06305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3B_RS06315 PF02817 e3 binding domain M3B_RS06315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3B_RS06315 PF00364 Biotin-requiring enzyme M3B_RS06320 PF02779 Transketolase, pyrimidine binding domain M3B_RS06320 PF02780 Transketolase, C-terminal domain M3B_RS06320 PF00364 Biotin-requiring enzyme M3B_RS06325 PF00676 Dehydrogenase E1 component M3B_RS06330 PF16326 ABC transporter C-terminal domain M3B_RS06330 PF12848 ABC transporter M3B_RS06330 PF00005 ABC transporter M3B_RS06340 PF00756 Putative esterase M3B_RS06345 PF17770 Ribonuclease J C-terminal domain M3B_RS06345 PF00753 Metallo-beta-lactamase superfamily M3B_RS06345 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M3B_RS06350 PF00005 ABC transporter M3B_RS06370 PF05670 NFACT protein RNA binding domain M3B_RS06380 PF01594 AI-2E family transporter M3B_RS06385 PF00293 NUDIX domain M3B_RS06390 PF16363 GDP-mannose 4,6 dehydratase M3B_RS06395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M3B_RS06400 PF00483 Nucleotidyl transferase M3B_RS06405 PF01266 FAD dependent oxidoreductase M3B_RS06410 PF01784 NIF3 (NGG1p interacting factor 3) M3B_RS06415 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M3B_RS06420 PF00730 HhH-GPD superfamily base excision DNA repair protein M3B_RS06420 PF10576 Iron-sulfur binding domain of endonuclease III M3B_RS06420 PF00633 Helix-hairpin-helix motif M3B_RS06430 PF00156 Phosphoribosyl transferase domain M3B_RS06435 PF01368 DHH family M3B_RS06435 PF02272 DHHA1 domain M3B_RS06435 PF17768 RecJ OB domain M3B_RS06435 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M3B_RS06440 PF00106 short chain dehydrogenase M3B_RS06445 PF00753 Metallo-beta-lactamase superfamily M3B_RS06445 PF12706 Beta-lactamase superfamily domain M3B_RS06450 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M3B_RS06450 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M3B_RS06455 PF13167 GTP-binding GTPase N-terminal M3B_RS06455 PF16360 GTP-binding GTPase Middle Region M3B_RS06455 PF01926 50S ribosome-binding GTPase M3B_RS06485 PF17773 UPF0176 acylphosphatase like domain M3B_RS06485 PF00581 Rhodanese-like domain M3B_RS06485 PF12368 Rhodanase C-terminal M3B_RS06500 PF00575 S1 RNA binding domain M3B_RS06520 PF01063 Amino-transferase class IV M3B_RS06525 PF00521 DNA gyrase/topoisomerase IV, subunit A M3B_RS06525 PF03989 DNA gyrase C-terminal domain, beta-propeller M3B_RS06530 PF00204 DNA gyrase B M3B_RS06530 PF01751 Toprim domain M3B_RS06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS06530 PF00986 DNA gyrase B subunit, carboxyl terminus M3B_RS06535 PF02660 Glycerol-3-phosphate acyltransferase M3B_RS06540 PF01979 Amidohydrolase family M3B_RS06545 PF03167 Uracil DNA glycosylase superfamily M3B_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS06555 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3B_RS06560 PF01425 Amidase M3B_RS06565 PF00156 Phosphoribosyl transferase domain M3B_RS06570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M3B_RS06580 PF03466 LysR substrate binding domain M3B_RS06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3B_RS06590 PF01048 Phosphorylase superfamily M3B_RS06595 PF01048 Phosphorylase superfamily M3B_RS06600 PF03960 ArsC family M3B_RS06605 PF01676 Metalloenzyme superfamily M3B_RS06610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M3B_RS06615 PF00004 ATPase family associated with various cellular activities (AAA) M3B_RS06615 PF17871 AAA lid domain M3B_RS06615 PF07724 AAA domain (Cdc48 subfamily) M3B_RS06615 PF10431 C-terminal, D2-small domain, of ClpB protein M3B_RS06625 PF01926 50S ribosome-binding GTPase M3B_RS06630 PF10431 C-terminal, D2-small domain, of ClpB protein M3B_RS06630 PF07724 AAA domain (Cdc48 subfamily) M3B_RS06630 PF06689 ClpX C4-type zinc finger M3B_RS06640 PF00186 Dihydrofolate reductase M3B_RS06645 PF00303 Thymidylate synthase M3B_RS06650 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M3B_RS06650 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M3B_RS06660 PF01070 FMN-dependent dehydrogenase M3B_RS06665 PF00288 GHMP kinases N terminal domain M3B_RS06665 PF08544 GHMP kinases C terminal M3B_RS06675 PF10509 Galactokinase galactose-binding signature M3B_RS06675 PF08544 GHMP kinases C terminal M3B_RS06675 PF00288 GHMP kinases N terminal domain M3B_RS06680 PF00512 His Kinase A (phospho-acceptor) domain M3B_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS06685 PF00072 Response regulator receiver domain M3B_RS06685 PF00486 Transcriptional regulatory protein, C terminal M3B_RS06690 PF04607 Region found in RelA / SpoT proteins M3B_RS06695 PF17936 Bacterial Ig domain M3B_RS06695 PF00149 Calcineurin-like phosphoesterase M3B_RS06695 PF02872 5'-nucleotidase, C-terminal domain M3B_RS06700 PF01327 Polypeptide deformylase M3B_RS06715 PF16326 ABC transporter C-terminal domain M3B_RS06715 PF12848 ABC transporter M3B_RS06715 PF00005 ABC transporter M3B_RS06720 PF12627 Probable RNA and SrmB- binding site of polymerase A M3B_RS06720 PF01743 Poly A polymerase head domain M3B_RS06720 PF13735 tRNA nucleotidyltransferase domain 2 putative M3B_RS06725 PF02645 Uncharacterised protein, DegV family COG1307 M3B_RS06735 PF00334 Nucleoside diphosphate kinase M3B_RS06740 PF09028 Mac 1 M3B_RS06745 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain M3B_RS06745 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain M3B_RS06750 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain M3B_RS06750 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain M3B_RS06760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M3B_RS06760 PF01476 LysM domain M3B_RS06765 PF01476 LysM domain M3B_RS06765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M3B_RS06770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M3B_RS06770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS06775 PF00294 pfkB family carbohydrate kinase M3B_RS06780 PF00455 DeoR C terminal sensor domain M3B_RS06780 PF08220 DeoR-like helix-turn-helix domain M3B_RS06785 PF02558 Ketopantoate reductase PanE/ApbA M3B_RS06785 PF08546 Ketopantoate reductase PanE/ApbA C terminal M3B_RS06795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS06800 PF01746 tRNA (Guanine-1)-methyltransferase M3B_RS06805 PF01782 RimM N-terminal domain M3B_RS06805 PF05239 PRC-barrel domain M3B_RS06835 PF00886 Ribosomal protein S16 M3B_RS06840 PF03009 Glycerophosphoryl diester phosphodiesterase family M3B_RS06845 PF02687 FtsX-like permease family M3B_RS06845 PF12704 MacB-like periplasmic core domain M3B_RS06850 PF00005 ABC transporter M3B_RS06855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3B_RS06860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3B_RS06860 PF02142 MGS-like domain M3B_RS06860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M3B_RS06870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M3B_RS06870 PF00117 Glutamine amidotransferase class-I M3B_RS06875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3B_RS06875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3B_RS06880 PF00860 Permease family M3B_RS06885 PF00156 Phosphoribosyl transferase domain M3B_RS06890 PF01479 S4 domain M3B_RS06890 PF00849 RNA pseudouridylate synthase M3B_RS06895 PF01252 Signal peptidase (SPase) II M3B_RS06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3B_RS06900 PF03466 LysR substrate binding domain M3B_RS06910 PF01016 Ribosomal L27 protein M3B_RS06920 PF00829 Ribosomal prokaryotic L21 protein M3B_RS06925 PF09587 Bacterial capsule synthesis protein PGA_cap M3B_RS06930 PF02926 THUMP domain M3B_RS06930 PF02568 Thiamine biosynthesis protein (ThiI) M3B_RS06935 PF00266 Aminotransferase class-V M3B_RS06945 PF02875 Mur ligase family, glutamate ligase domain M3B_RS06945 PF08245 Mur ligase middle domain M3B_RS06950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3B_RS06950 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS06955 PF06133 Control of competence regulator ComK, YlbF/YmcA M3B_RS06960 PF01264 Chorismate synthase M3B_RS06965 PF01487 Type I 3-dehydroquinase M3B_RS06970 PF10672 S-adenosylmethionine-dependent methyltransferase M3B_RS06970 PF17785 PUA-like domain M3B_RS06975 PF00884 Sulfatase M3B_RS06980 PF00453 Ribosomal protein L20 M3B_RS06985 PF01632 Ribosomal protein L35 M3B_RS06990 PF00707 Translation initiation factor IF-3, C-terminal domain M3B_RS06990 PF05198 Translation initiation factor IF-3, N-terminal domain M3B_RS06995 PF02224 Cytidylate kinase M3B_RS07015 PF01546 Peptidase family M20/M25/M40 M3B_RS07015 PF07687 Peptidase dimerisation domain M3B_RS07035 PF00535 Glycosyl transferase family 2 M3B_RS07050 PF00535 Glycosyl transferase family 2 M3B_RS07055 PF00005 ABC transporter M3B_RS07065 PF02709 N-terminal domain of galactosyltransferase M3B_RS07065 PF00535 Glycosyl transferase family 2 M3B_RS07075 PF04321 RmlD substrate binding domain M3B_RS07080 PF01883 Iron-sulfur cluster assembly protein M3B_RS07085 PF04539 Sigma-70 region 3 M3B_RS07085 PF04542 Sigma-70 region 2 M3B_RS07085 PF00140 Sigma-70 factor, region 1.2 M3B_RS07085 PF03979 Sigma-70 factor, region 1.1 M3B_RS07085 PF04545 Sigma-70, region 4 M3B_RS07090 PF01807 CHC2 zinc finger M3B_RS07090 PF10410 DnaB-helicase binding domain of primase M3B_RS07090 PF08275 DNA primase catalytic core, N-terminal domain M3B_RS07095 PF01741 Large-conductance mechanosensitive channel, MscL M3B_RS07100 PF01165 Ribosomal protein S21 M3B_RS07105 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3B_RS07110 PF00580 UvrD/REP helicase N-terminal domain M3B_RS07110 PF13361 UvrD-like helicase C-terminal domain M3B_RS07110 PF12705 PD-(D/E)XK nuclease superfamily M3B_RS07115 PF12705 PD-(D/E)XK nuclease superfamily M3B_RS07130 PF02687 FtsX-like permease family M3B_RS07145 PF01588 Putative tRNA binding domain M3B_RS07145 PF03483 B3/4 domain M3B_RS07145 PF03484 tRNA synthetase B5 domain M3B_RS07145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M3B_RS07145 PF03147 Ferredoxin-fold anticodon binding domain M3B_RS07150 PF01409 tRNA synthetases class II core domain (F) M3B_RS07150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M3B_RS07165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3B_RS07175 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M3B_RS07175 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M3B_RS07180 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3B_RS07180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3B_RS07185 PF00231 ATP synthase M3B_RS07190 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3B_RS07190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3B_RS07190 PF00306 ATP synthase alpha/beta chain, C terminal domain M3B_RS07195 PF00213 ATP synthase delta (OSCP) subunit M3B_RS07200 PF00430 ATP synthase B/B' CF(0) M3B_RS07205 PF00119 ATP synthase A chain M3B_RS07210 PF00137 ATP synthase subunit C M3B_RS07215 PF00781 Diacylglycerol kinase catalytic domain M3B_RS07220 PF12826 Helix-hairpin-helix motif M3B_RS07220 PF00533 BRCA1 C Terminus (BRCT) domain M3B_RS07220 PF01653 NAD-dependent DNA ligase adenylation domain M3B_RS07220 PF03120 NAD-dependent DNA ligase OB-fold domain M3B_RS07220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M3B_RS07225 PF06177 QueT transporter M3B_RS07250 PF00005 ABC transporter M3B_RS07285 PF00113 Enolase, C-terminal TIM barrel domain M3B_RS07285 PF03952 Enolase, N-terminal domain M3B_RS07295 PF06160 Septation ring formation regulator, EzrA M3B_RS07300 PF01751 Toprim domain M3B_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS07300 PF00204 DNA gyrase B M3B_RS07300 PF00986 DNA gyrase B subunit, carboxyl terminus M3B_RS07320 PF01245 Ribosomal protein L19 M3B_RS07325 PF00654 Voltage gated chloride channel M3B_RS07335 PF00258 Flavodoxin M3B_RS07340 PF01368 DHH family M3B_RS07340 PF02272 DHHA1 domain M3B_RS07345 PF01197 Ribosomal protein L31 M3B_RS07350 PF01380 SIS domain M3B_RS07355 PF00392 Bacterial regulatory proteins, gntR family M3B_RS07355 PF07702 UTRA domain M3B_RS07360 PF01297 Zinc-uptake complex component A periplasmic M3B_RS07360 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M3B_RS07365 PF03577 Peptidase family C69 M3B_RS07370 PF02650 WhiA C-terminal HTH domain M3B_RS07370 PF14527 WhiA LAGLIDADG-like domain M3B_RS07370 PF10298 WhiA N-terminal LAGLIDADG-like domain M3B_RS07375 PF01933 Uncharacterised protein family UPF0052 M3B_RS07380 PF03668 P-loop ATPase protein family M3B_RS07385 PF00152 tRNA synthetases class II (D, K and N) M3B_RS07385 PF01336 OB-fold nucleic acid binding domain M3B_RS07390 PF00155 Aminotransferase class I and II M3B_RS07395 PF00929 Exonuclease M3B_RS07395 PF04851 Type III restriction enzyme, res subunit M3B_RS07395 PF13307 Helicase C-terminal domain M3B_RS07405 PF00753 Metallo-beta-lactamase superfamily M3B_RS07410 PF02687 FtsX-like permease family M3B_RS07410 PF18075 FtsX extracellular domain M3B_RS07415 PF00005 ABC transporter M3B_RS07425 PF08331 Domain of unknown function (DUF1730) M3B_RS07430 PF13419 Haloacid dehalogenase-like hydrolase M3B_RS07435 PF01081 KDPG and KHG aldolase M3B_RS07460 PF07470 Glycosyl Hydrolase Family 88 M3B_RS07465 PF03830 PTS system sorbose subfamily IIB component M3B_RS07470 PF03609 PTS system sorbose-specific iic component M3B_RS07485 PF00356 Bacterial regulatory proteins, lacI family M3B_RS07490 PF00689 Cation transporting ATPase, C-terminus M3B_RS07490 PF00690 Cation transporter/ATPase, N-terminus M3B_RS07500 PF01966 HD domain M3B_RS07525 PF00121 Triosephosphate isomerase M3B_RS07530 PF03144 Elongation factor Tu domain 2 M3B_RS07530 PF00009 Elongation factor Tu GTP binding domain M3B_RS07530 PF03143 Elongation factor Tu C-terminal domain M3B_RS07535 PF01098 Cell cycle protein M3B_RS07540 PF00311 Phosphoenolpyruvate carboxylase M3B_RS07545 PF01432 Peptidase family M3 M3B_RS07545 PF08439 Oligopeptidase F M3B_RS07550 PF00255 Glutathione peroxidase M3B_RS07570 PF09515 Thiamine transporter protein (Thia_YuaJ) M3B_RS07590 PF01336 OB-fold nucleic acid binding domain M3B_RS07590 PF00152 tRNA synthetases class II (D, K and N) M3B_RS07600 PF02229 Transcriptional Coactivator p15 (PC4) M3B_RS07605 PF16325 Peptidase family U32 C-terminal domain M3B_RS07605 PF01136 Peptidase family U32 M3B_RS07620 PF12732 YtxH-like protein M3B_RS07630 PF01790 Prolipoprotein diacylglyceryl transferase M3B_RS07635 PF07475 HPr Serine kinase C-terminal domain M3B_RS07635 PF02603 HPr Serine kinase N terminus M3B_RS07645 PF10263 SprT-like family M3B_RS07650 PF17674 HHH domain M3B_RS07650 PF00575 S1 RNA binding domain M3B_RS07650 PF16921 Tex protein YqgF-like domain M3B_RS07650 PF09371 Tex-like protein N-terminal domain M3B_RS07660 PF03773 Predicted permease M3B_RS07665 PF09323 Domain of unknown function (DUF1980) M3B_RS07670 PF00232 Glycosyl hydrolase family 1 M3B_RS07675 PF02378 Phosphotransferase system, EIIC M3B_RS07675 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M3B_RS07675 PF00367 phosphotransferase system, EIIB M3B_RS07680 PF00874 PRD domain M3B_RS07680 PF03123 CAT RNA binding domain M3B_RS07685 PF07690 Major Facilitator Superfamily M3B_RS07690 PF00448 SRP54-type protein, GTPase domain M3B_RS07690 PF02881 SRP54-type protein, helical bundle domain M3B_RS07765 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M3B_RS07765 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3B_RS07765 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3B_RS07785 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) M3B_RS07805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M3B_RS07805 PF08501 Shikimate dehydrogenase substrate binding domain M3B_RS07815 PF06470 SMC proteins Flexible Hinge Domain M3B_RS07815 PF02463 RecF/RecN/SMC N terminal domain M3B_RS07820 PF14622 Ribonuclease-III-like M3B_RS07820 PF00035 Double-stranded RNA binding motif M3B_RS07825 PF00753 Metallo-beta-lactamase superfamily M3B_RS07830 PF00672 HAMP domain M3B_RS07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS07830 PF00512 His Kinase A (phospho-acceptor) domain M3B_RS07830 PF13426 PAS domain M3B_RS07835 PF00072 Response regulator receiver domain M3B_RS07835 PF00486 Transcriptional regulatory protein, C terminal M3B_RS07850 PF00108 Thiolase, N-terminal domain M3B_RS07850 PF02803 Thiolase, C-terminal domain M3B_RS07870 PF00005 ABC transporter M3B_RS07875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3B_RS07875 PF02824 TGS domain M3B_RS07875 PF03129 Anticodon binding domain M3B_RS07875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3B_RS07880 PF13439 Glycosyltransferase Family 4 M3B_RS07880 PF00534 Glycosyl transferases group 1 M3B_RS07885 PF00534 Glycosyl transferases group 1 M3B_RS07885 PF13439 Glycosyltransferase Family 4 M3B_RS07890 PF00356 Bacterial regulatory proteins, lacI family M3B_RS07895 PF01321 Creatinase/Prolidase N-terminal domain M3B_RS07895 PF00557 Metallopeptidase family M24 M3B_RS07900 PF00881 Nitroreductase family M3B_RS07905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3B_RS07910 PF00535 Glycosyl transferase family 2 M3B_RS07925 PF01470 Pyroglutamyl peptidase M3B_RS07935 PF01668 SmpB protein M3B_RS07940 PF00773 RNB domain M3B_RS07940 PF08206 Ribonuclease B OB domain M3B_RS07940 PF00575 S1 RNA binding domain M3B_RS07940 PF17876 Cold shock domain M3B_RS07950 PF00471 Ribosomal protein L33 M3B_RS07955 PF07690 Major Facilitator Superfamily M3B_RS07955 PF00083 Sugar (and other) transporter M3B_RS07960 PF05872 Bacterial protein of unknown function (DUF853) M3B_RS07965 PF01121 Dephospho-CoA kinase M3B_RS07970 PF06827 Zinc finger found in FPG and IleRS M3B_RS07970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M3B_RS07970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M3B_RS08040 PF13344 Haloacid dehalogenase-like hydrolase M3B_RS08040 PF00293 NUDIX domain M3B_RS08045 PF07650 KH domain M3B_RS08045 PF01926 50S ribosome-binding GTPase M3B_RS08050 PF01219 Prokaryotic diacylglycerol kinase M3B_RS08055 PF02130 Uncharacterized protein family UPF0054 M3B_RS08060 PF03167 Uracil DNA glycosylase superfamily M3B_RS08065 PF02562 PhoH-like protein M3B_RS08070 PF06100 MCRA family M3B_RS08080 PF06855 YozE SAM-like fold M3B_RS08085 PF01625 Peptide methionine sulfoxide reductase M3B_RS08095 PF01765 Ribosome recycling factor M3B_RS08100 PF00696 Amino acid kinase family M3B_RS08105 PF00687 Ribosomal protein L1p/L10e family M3B_RS08110 PF00298 Ribosomal protein L11, RNA binding domain M3B_RS08110 PF03946 Ribosomal protein L11, N-terminal domain M3B_RS08120 PF01580 FtsK/SpoIIIE family M3B_RS08120 PF17854 FtsK alpha domain M3B_RS08120 PF09397 Ftsk gamma domain M3B_RS08125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3B_RS08130 PF00950 ABC 3 transport family M3B_RS08135 PF00005 ABC transporter M3B_RS08140 PF01297 Zinc-uptake complex component A periplasmic M3B_RS08155 PF01048 Phosphorylase superfamily M3B_RS08165 PF00293 NUDIX domain M3B_RS08170 PF14602 Hexapeptide repeat of succinyl-transferase M3B_RS08170 PF00132 Bacterial transferase hexapeptide (six repeats) M3B_RS08170 PF12804 MobA-like NTP transferase domain M3B_RS08175 PF07690 Major Facilitator Superfamily M3B_RS08180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3B_RS08180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M3B_RS08210 PF03496 ADP-ribosyltransferase exoenzyme M3B_RS08215 PF00317 Ribonucleotide reductase, all-alpha domain M3B_RS08215 PF08343 Ribonucleotide reductase N-terminal M3B_RS08215 PF02867 Ribonucleotide reductase, barrel domain M3B_RS08220 PF07972 NrdI Flavodoxin like M3B_RS08225 PF00268 Ribonucleotide reductase, small chain M3B_RS08230 PF09334 tRNA synthetases class I (M) M3B_RS08230 PF01588 Putative tRNA binding domain M3B_RS08245 PF06280 Fn3-like domain M3B_RS08245 PF02225 PA domain M3B_RS08245 PF00082 Subtilase family M3B_RS08245 PF00746 LPXTG cell wall anchor motif M3B_RS08250 PF01070 FMN-dependent dehydrogenase M3B_RS08260 PF03372 Endonuclease/Exonuclease/phosphatase family M3B_RS08265 PF03960 ArsC family M3B_RS08270 PF03932 CutC family M3B_RS08280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M3B_RS08285 PF06156 Initiation control protein YabA M3B_RS08295 PF09115 DNA polymerase III, delta subunit, C terminal M3B_RS08300 PF02223 Thymidylate kinase M3B_RS08305 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M3B_RS08310 PF00574 Clp protease M3B_RS08325 PF01943 Polysaccharide biosynthesis protein M3B_RS08325 PF14667 Polysaccharide biosynthesis C-terminal domain M3B_RS08330 PF02875 Mur ligase family, glutamate ligase domain M3B_RS08330 PF08245 Mur ligase middle domain M3B_RS08335 PF00005 ABC transporter M3B_RS08340 PF01497 Periplasmic binding protein M3B_RS08345 PF01032 FecCD transport family M3B_RS08350 PF01032 FecCD transport family M3B_RS08360 PF02833 DHHA2 domain M3B_RS08360 PF01368 DHH family M3B_RS08365 PF04055 Radical SAM superfamily M3B_RS08370 PF01595 Cyclin M transmembrane N-terminal domain M3B_RS08370 PF03471 Transporter associated domain M3B_RS08370 PF00571 CBS domain M3B_RS08375 PF06962 Putative rRNA methylase M3B_RS08380 PF16199 Radical_SAM C-terminal domain M3B_RS08380 PF04055 Radical SAM superfamily M3B_RS08385 PF01569 PAP2 superfamily M3B_RS08390 PF12822 ECF transporter, substrate-specific component M3B_RS08395 PF00588 SpoU rRNA Methylase family M3B_RS08400 PF01809 Putative membrane protein insertion efficiency factor M3B_RS08405 PF01479 S4 domain M3B_RS08405 PF00849 RNA pseudouridylate synthase M3B_RS08410 PF04079 Segregation and condensation complex subunit ScpB M3B_RS08415 PF02616 Segregation and condensation protein ScpA M3B_RS08435 PF01725 Ham1 family M3B_RS08440 PF01177 Asp/Glu/Hydantoin racemase M3B_RS08445 PF03672 Uncharacterised protein family (UPF0154) M3B_RS08450 PF01027 Inhibitor of apoptosis-promoting Bax1 M3B_RS08460 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3B_RS08460 PF00588 SpoU rRNA Methylase family M3B_RS08465 PF00708 Acylphosphatase M3B_RS08470 PF02096 60Kd inner membrane protein M3B_RS08475 PF01272 Transcription elongation factor, GreA/GreB, C-term M3B_RS08475 PF03449 Transcription elongation factor, N-terminal M3B_RS08480 PF02618 YceG-like family M3B_RS08490 PF01225 Mur ligase family, catalytic domain M3B_RS08490 PF02875 Mur ligase family, glutamate ligase domain M3B_RS08490 PF08245 Mur ligase middle domain M3B_RS08500 PF00271 Helicase conserved C-terminal domain M3B_RS08500 PF12419 SNF2 Helicase protein M3B_RS08500 PF00176 SNF2 family N-terminal domain M3B_RS08505 PF01926 50S ribosome-binding GTPase M3B_RS08505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M3B_RS08510 PF01695 IstB-like ATP binding protein M3B_RS08510 PF07319 Primosomal protein DnaI N-terminus M3B_RS08520 PF03477 ATP cone domain M3B_RS08525 PF18719 ArlS sensor domain M3B_RS08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS08525 PF00512 His Kinase A (phospho-acceptor) domain M3B_RS08530 PF00486 Transcriptional regulatory protein, C terminal M3B_RS08530 PF00072 Response regulator receiver domain M3B_RS08540 PF01435 Peptidase family M48 M3B_RS08545 PF04011 LemA family M3B_RS08550 PF02527 rRNA small subunit methyltransferase G M3B_RS08555 PF02386 Cation transport protein M3B_RS08560 PF02080 TrkA-C domain M3B_RS08560 PF02254 TrkA-N domain M3B_RS08565 PF00375 Sodium:dicarboxylate symporter family M3B_RS08570 PF05525 Branched-chain amino acid transport protein M3B_RS08575 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS08580 PF09383 NIL domain M3B_RS08580 PF00005 ABC transporter M3B_RS08585 PF03180 NLPA lipoprotein M3B_RS08590 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3B_RS08595 PF01709 Transcriptional regulator M3B_RS08605 PF05636 HIGH Nucleotidyl Transferase M3B_RS08610 PF13649 Methyltransferase domain M3B_RS08620 PF01966 HD domain M3B_RS08625 PF01467 Cytidylyltransferase-like M3B_RS08630 PF01985 CRS1 / YhbY (CRM) domain M3B_RS08635 PF01926 50S ribosome-binding GTPase M3B_RS08650 PF13808 DDE_Tnp_1-associated M3B_RS08650 PF01609 Transposase DDE domain M3B_RS08690 PF02595 Glycerate kinase family M3B_RS08695 PF12008 Type I restriction and modification enzyme - subunit R C terminal M3B_RS08695 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M3B_RS08695 PF18766 SWI2/SNF2 ATPase M3B_RS08705 PF02384 N-6 DNA Methylase M3B_RS08705 PF12161 HsdM N-terminal domain M3B_RS08715 PF00072 Response regulator receiver domain M3B_RS08715 PF00486 Transcriptional regulatory protein, C terminal M3B_RS08725 PF02687 FtsX-like permease family M3B_RS08730 PF00005 ABC transporter M3B_RS08735 PF00005 ABC transporter M3B_RS08735 PF03412 Peptidase C39 family M3B_RS08735 PF00664 ABC transporter transmembrane region M3B_RS08750 PF04604 Type-A lantibiotic M3B_RS08755 PF00232 Glycosyl hydrolase family 1 M3B_RS08760 PF02378 Phosphotransferase system, EIIC M3B_RS08760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS08765 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M3B_RS08770 PF01791 DeoC/LacD family aldolase M3B_RS08775 PF00294 pfkB family carbohydrate kinase M3B_RS08780 PF02502 Ribose/Galactose Isomerase M3B_RS08785 PF02502 Ribose/Galactose Isomerase M3B_RS08790 PF00455 DeoR C terminal sensor domain M3B_RS08790 PF08220 DeoR-like helix-turn-helix domain M3B_RS08815 PF00589 Phage integrase family M3B_RS08815 PF02899 Phage integrase, N-terminal SAM-like domain M3B_RS08820 PF00380 Ribosomal protein S9/S16 M3B_RS08825 PF00572 Ribosomal protein L13 M3B_RS08830 PF01381 Helix-turn-helix M3B_RS08840 PF02645 Uncharacterised protein, DegV family COG1307 M3B_RS08850 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3B_RS08850 PF00588 SpoU rRNA Methylase family M3B_RS08860 PF00636 Ribonuclease III domain M3B_RS08865 PF01406 tRNA synthetases class I (C) catalytic domain M3B_RS08865 PF09190 DALR domain M3B_RS08880 PF06426 Serine acetyltransferase, N-terminal M3B_RS08880 PF00132 Bacterial transferase hexapeptide (six repeats) M3B_RS08890 PF00575 S1 RNA binding domain M3B_RS08890 PF03725 3' exoribonuclease family, domain 2 M3B_RS08890 PF01138 3' exoribonuclease family, domain 1 M3B_RS08890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M3B_RS08890 PF00013 KH domain M3B_RS08895 PF00923 Transaldolase/Fructose-6-phosphate aldolase M3B_RS08900 PF03611 PTS system sugar-specific permease component M3B_RS08905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS08910 PF00874 PRD domain M3B_RS08910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M3B_RS08910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS08910 PF05043 Mga helix-turn-helix domain M3B_RS08910 PF08279 HTH domain M3B_RS08915 PF00312 Ribosomal protein S15 M3B_RS08930 PF01327 Polypeptide deformylase M3B_RS08935 PF03358 NADPH-dependent FMN reductase M3B_RS08940 PF01047 MarR family M3B_RS08945 PF00929 Exonuclease M3B_RS08945 PF02811 PHP domain M3B_RS08945 PF14579 Helix-hairpin-helix motif M3B_RS08945 PF14480 DNA polymerase III polC-type N-terminus I M3B_RS08945 PF11490 DNA polymerase III polC-type N-terminus II M3B_RS08945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M3B_RS08945 PF07733 Bacterial DNA polymerase III alpha NTPase domain M3B_RS08950 PF03129 Anticodon binding domain M3B_RS08950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3B_RS08950 PF04073 Aminoacyl-tRNA editing domain M3B_RS08955 PF02163 Peptidase family M50 M3B_RS08955 PF13180 PDZ domain M3B_RS08965 PF01255 Putative undecaprenyl diphosphate synthase M3B_RS08970 PF02699 Preprotein translocase subunit M3B_RS08980 PF17999 Pullulanase N1-terminal domain M3B_RS08980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M3B_RS08980 PF00128 Alpha amylase, catalytic domain M3B_RS08990 PF00128 Alpha amylase, catalytic domain M3B_RS08995 PF00005 ABC transporter M3B_RS08995 PF17912 MalK OB fold domain M3B_RS08995 PF03459 TOBE domain M3B_RS09000 PF13556 PucR C-terminal helix-turn-helix domain M3B_RS09005 PF02821 Staphylokinase/Streptokinase family M3B_RS09010 PF02580 D-Tyr-tRNA(Tyr) deacylase M3B_RS09015 PF04607 Region found in RelA / SpoT proteins M3B_RS09015 PF02824 TGS domain M3B_RS09015 PF13291 ACT domain M3B_RS09025 PF13808 DDE_Tnp_1-associated M3B_RS09025 PF01609 Transposase DDE domain M3B_RS09030 PF07972 NrdI Flavodoxin like M3B_RS09035 PF03372 Endonuclease/Exonuclease/phosphatase family M3B_RS09040 PF00367 phosphotransferase system, EIIB M3B_RS09040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M3B_RS09040 PF02378 Phosphotransferase system, EIIC M3B_RS09045 PF04452 RNA methyltransferase M3B_RS09060 PF04715 Anthranilate synthase component I, N terminal region M3B_RS09060 PF00425 chorismate binding enzyme M3B_RS09065 PF00117 Glutamine amidotransferase class-I M3B_RS09070 PF05496 Holliday junction DNA helicase RuvB P-loop domain M3B_RS09070 PF16193 AAA C-terminal domain M3B_RS09070 PF12002 MgsA AAA+ ATPase C terminal M3B_RS09095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3B_RS09100 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS09105 PF00528 Binding-protein-dependent transport system inner membrane component M3B_RS09110 PF12558 ATP-binding cassette cobalt transporter M3B_RS09110 PF00005 ABC transporter M3B_RS09115 PF00005 ABC transporter M3B_RS09120 PF05532 CsbD-like M3B_RS09130 PF01297 Zinc-uptake complex component A periplasmic M3B_RS09135 PF02225 PA domain M3B_RS09135 PF00082 Subtilase family M3B_RS09135 PF06280 Fn3-like domain M3B_RS09140 PF04650 YSIRK type signal peptide M3B_RS09140 PF00746 LPXTG cell wall anchor motif M3B_RS09145 PF08280 M protein trans-acting positive regulator (MGA) HTH domain M3B_RS09145 PF05043 Mga helix-turn-helix domain M3B_RS09145 PF08270 M protein trans-acting positive regulator (MGA) PRD domain M3B_RS09160 PF05257 CHAP domain M3B_RS09160 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M3B_RS09165 PF13493 Domain of unknown function (DUF4118) M3B_RS09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3B_RS09165 PF00512 His Kinase A (phospho-acceptor) domain M3B_RS09165 PF02702 Osmosensitive K+ channel His kinase sensor domain M3B_RS09170 PF00486 Transcriptional regulatory protein, C terminal M3B_RS09170 PF00072 Response regulator receiver domain M3B_RS09175 PF12704 MacB-like periplasmic core domain M3B_RS09175 PF02687 FtsX-like permease family M3B_RS09180 PF00005 ABC transporter M3B_RS09205 PF13145 PPIC-type PPIASE domain M3B_RS09220 PF13734 Spi protease inhibitor M3B_RS09220 PF01640 Peptidase C10 family M3B_RS09245 PF04608 Phosphatidylglycerophosphatase A M3B_RS09250 PF00465 Iron-containing alcohol dehydrogenase M3B_RS09255 PF00923 Transaldolase/Fructose-6-phosphate aldolase M3B_RS09260 PF02901 Pyruvate formate lyase-like M3B_RS09260 PF01228 Glycine radical M3B_RS09265 PF02378 Phosphotransferase system, EIIC M3B_RS09270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3B_RS09275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M3B_RS09280 PF04198 Putative sugar-binding domain M3B_RS09285 PF08220 DeoR-like helix-turn-helix domain M3B_RS09285 PF00455 DeoR C terminal sensor domain M3B_RS09290 PF04055 Radical SAM superfamily M3B_RS09305 PF00471 Ribosomal protein L33 M3B_RS09310 PF00905 Penicillin binding protein transpeptidase domain M3B_RS09310 PF00912 Transglycosylase M3B_RS09325 PF00849 RNA pseudouridylate synthase M3B_RS09325 PF01479 S4 domain M3B_RS09335 PF03577 Peptidase family C69 M3B_RS09350 PF00118 TCP-1/cpn60 chaperonin family M3B_RS09355 PF00166 Chaperonin 10 Kd subunit M3B_RS09360 PF17871 AAA lid domain M3B_RS09360 PF00004 ATPase family associated with various cellular activities (AAA) M3B_RS09360 PF02861 Clp amino terminal domain, pathogenicity island component M3B_RS09360 PF10431 C-terminal, D2-small domain, of ClpB protein M3B_RS09360 PF07724 AAA domain (Cdc48 subfamily) M3B_RS09365 PF05848 CtsR N-terminal HTH domain M3B_RS09365 PF17727 CtsR C-terminal dimerization domain M3B_RS09370 PF00313 'Cold-shock' DNA-binding domain M3B_RS09380 PF00578 AhpC/TSA family M3B_RS09385 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3B_RS09385 PF13192 Thioredoxin domain M3B_RS09390 PF01979 Amidohydrolase family M3B_RS09395 PF17391 Urocanase N-terminal domain M3B_RS09395 PF17392 Urocanase C-terminal domain M3B_RS09395 PF01175 Urocanase Rossmann-like domain M3B_RS09400 PF02971 Formiminotransferase domain M3B_RS09400 PF07837 Formiminotransferase domain, N-terminal subdomain M3B_RS09405 PF04961 Formiminotransferase-cyclodeaminase M3B_RS09410 PF01268 Formate--tetrahydrofolate ligase M3B_RS09420 PF13520 Amino acid permease M3B_RS09425 PF00221 Aromatic amino acid lyase M3B_RS09430 PF00491 Arginase family M3B_RS09440 PF00318 Ribosomal protein S2 M3B_RS09445 PF00889 Elongation factor TS M3B_RS09450 PF01431 Peptidase family M13 M3B_RS09450 PF05649 Peptidase family M13 M3B_RS09455 PF00128 Alpha amylase, catalytic domain M3B_RS09455 PF16657 Maltogenic Amylase, C-terminal domain M3B_RS09460 PF00367 phosphotransferase system, EIIB M3B_RS09460 PF02378 Phosphotransferase system, EIIC M3B_RS09465 PF07702 UTRA domain M3B_RS09465 PF00392 Bacterial regulatory proteins, gntR family M3B_RS09475 PF01638 HxlR-like helix-turn-helix M3B_RS09480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3B_RS09485 PF03883 Peroxide stress protein YaaA M3B_RS09500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3B_RS09510 PF03477 ATP cone domain M3B_RS09510 PF13597 Anaerobic ribonucleoside-triphosphate reductase M3B_RS09520 PF06949 Protein of unknown function (DUF1292) M3B_RS09525 PF03652 Holliday junction resolvase M3B_RS09530 PF06135 IreB regulatory phosphoprotein M3B_RS09535 PF03960 ArsC family M3B_RS09540 PF00154 recA bacterial DNA recombination protein M3B_RS09545 PF02464 Competence-damaged protein M3B_RS09545 PF18146 Damage-inducible protein CinA KH domain M3B_RS09545 PF00994 Probable molybdopterin binding domain M3B_RS09550 PF13302 Acetyltransferase (GNAT) domain M3B_RS09550 PF03352 Methyladenine glycosylase M3B_RS09550 PF13673 Acetyltransferase (GNAT) domain M3B_RS09550 PF00958 GMP synthase C terminal domain M3B_RS09550 PF00117 Glutamine amidotransferase class-I M3B_RS09555 PF01330 RuvA N terminal domain M3B_RS09555 PF07499 RuvA, C-terminal domain M3B_RS09565 PF08676 MutL C terminal dimerisation domain M3B_RS09565 PF01119 DNA mismatch repair protein, C-terminal domain M3B_RS09570 PF00488 MutS domain V M3B_RS09570 PF05190 MutS family domain IV M3B_RS09570 PF01624 MutS domain I M3B_RS09570 PF05188 MutS domain II M3B_RS09570 PF05192 MutS domain III M3B_RS09580 PF01316 Arginine repressor, DNA binding domain M3B_RS09580 PF02863 Arginine repressor, C-terminal domain M3B_RS09585 PF00750 tRNA synthetases class I (R) M3B_RS09585 PF05746 DALR anticodon binding domain M3B_RS09585 PF03485 Arginyl tRNA synthetase N terminal domain M3B_RS09595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M3B_RS09595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M3B_RS09600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M3B_RS09600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M3B_RS09605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M3B_RS09605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M3B_RS09610 PF02938 GAD domain M3B_RS09610 PF00152 tRNA synthetases class II (D, K and N) M3B_RS09610 PF01336 OB-fold nucleic acid binding domain M3B_RS09615 PF03129 Anticodon binding domain M3B_RS09615 PF13393 Histidyl-tRNA synthetase M3B_RS09620 PF01783 Ribosomal L32p protein family M3B_RS09625 PF00471 Ribosomal protein L33 M3B_RS09640 PF01022 Bacterial regulatory protein, arsR family M3B_RS09670 PF00293 NUDIX domain M3B_RS09675 PF03551 Transcriptional regulator PadR-like family M3B_RS09700 PF01479 S4 domain M3B_RS09700 PF00163 Ribosomal protein S4/S9 N-terminal domain M3B_RS09710 PF00772 DnaB-like helicase N terminal domain M3B_RS09710 PF03796 DnaB-like helicase C terminal domain M3B_RS09715 PF03948 Ribosomal protein L9, C-terminal domain M3B_RS09715 PF01281 Ribosomal protein L9, N-terminal domain M3B_RS09720 PF01368 DHH family M3B_RS09720 PF02272 DHHA1 domain M3B_RS09725 PF01134 Glucose inhibited division protein A M3B_RS09725 PF13932 GidA associated domain M3B_RS09740 PF01842 ACT domain M3B_RS09740 PF03315 Serine dehydratase beta chain M3B_RS09745 PF03313 Serine dehydratase alpha chain M3B_RS09750 PF06737 Transglycosylase-like domain M3B_RS09755 PF02361 Cobalt transport protein M3B_RS09760 PF00005 ABC transporter M3B_RS09765 PF00005 ABC transporter M3B_RS09770 PF01066 CDP-alcohol phosphatidyltransferase M3B_RS09780 PF05193 Peptidase M16 inactive domain M3B_RS09780 PF00675 Insulinase (Peptidase family M16) M3B_RS09790 PF00535 Glycosyl transferase family 2 M3B_RS09795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3B_RS09795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3B_RS09795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M3B_RS09805 PF00483 Nucleotidyl transferase M3B_RS09815 PF02463 RecF/RecN/SMC N terminal domain M3B_RS09820 PF06800 Sugar transport protein M3B_RS09825 PF00571 CBS domain M3B_RS09825 PF00478 IMP dehydrogenase / GMP reductase domain M3B_RS09830 PF00579 tRNA synthetases class I (W and Y) M3B_RS09835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M3B_RS09835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M3B_RS09840 PF00005 ABC transporter M3B_RS09840 PF12848 ABC transporter M3B_RS09860 PF13936 Helix-turn-helix domain M3B_RS09870 PF02590 Predicted SPOUT methyltransferase M3B_RS09875 PF13180 PDZ domain M3B_RS09880 PF17762 HTH domain found in ParB protein M3B_RS09880 PF02195 ParB-like nuclease domain