locus-tag class description VB13_RS00005 PF00308 Bacterial dnaA protein VB13_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix VB13_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain VB13_RS00010 PF02767 DNA polymerase III beta subunit, central domain VB13_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain VB13_RS00020 PF01926 50S ribosome-binding GTPase VB13_RS00020 PF06071 Protein of unknown function (DUF933) VB13_RS00025 PF01195 Peptidyl-tRNA hydrolase VB13_RS00030 PF17757 UvrB interaction domain VB13_RS00030 PF03461 TRCF domain VB13_RS00030 PF00271 Helicase conserved C-terminal domain VB13_RS00030 PF00270 DEAD/DEAH box helicase VB13_RS00030 PF02559 CarD-like/TRCF domain VB13_RS00035 PF01479 S4 domain VB13_RS00050 PF01171 PP-loop family VB13_RS00055 PF00156 Phosphoribosyl transferase domain VB13_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) VB13_RS00060 PF17862 AAA+ lid domain VB13_RS00060 PF06480 FtsH Extracellular VB13_RS00060 PF01434 Peptidase family M41 VB13_RS00240 PF05257 CHAP domain VB13_RS00240 PF01476 LysM domain VB13_RS00245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VB13_RS00245 PF14572 Phosphoribosyl synthetase-associated domain VB13_RS00250 PF02565 Recombination protein O C terminal VB13_RS00250 PF11967 Recombination protein O N terminal VB13_RS00255 PF02504 Fatty acid synthesis protein VB13_RS00260 PF00550 Phosphopantetheine attachment site VB13_RS00265 PF01259 SAICAR synthetase VB13_RS00270 PF00586 AIR synthase related protein, N-terminal domain VB13_RS00270 PF02769 AIR synthase related protein, C-terminal domain VB13_RS00270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VB13_RS00275 PF00156 Phosphoribosyl transferase domain VB13_RS00275 PF13537 Glutamine amidotransferase domain VB13_RS00280 PF02769 AIR synthase related protein, C-terminal domain VB13_RS00280 PF00586 AIR synthase related protein, N-terminal domain VB13_RS00285 PF00551 Formyl transferase VB13_RS00290 PF01808 AICARFT/IMPCHase bienzyme VB13_RS00290 PF02142 MGS-like domain VB13_RS00300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VB13_RS00300 PF02843 Phosphoribosylglycinamide synthetase, C domain VB13_RS00300 PF02844 Phosphoribosylglycinamide synthetase, N domain VB13_RS00305 PF00731 AIR carboxylase VB13_RS00310 PF02222 ATP-grasp domain VB13_RS00310 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VB13_RS00310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VB13_RS00320 PF00206 Lyase VB13_RS00320 PF10397 Adenylosuccinate lyase C-terminus VB13_RS00335 PF17864 RuvB AAA lid domain VB13_RS00335 PF05491 RuvB C-terminal winged helix domain VB13_RS00335 PF05496 Holliday junction DNA helicase RuvB P-loop domain VB13_RS00340 PF01451 Low molecular weight phosphotyrosine protein phosphatase VB13_RS00350 PF01757 Acyltransferase family VB13_RS00355 PF00171 Aldehyde dehydrogenase family VB13_RS00355 PF00465 Iron-containing alcohol dehydrogenase VB13_RS00360 PF08240 Alcohol dehydrogenase GroES-like domain VB13_RS00360 PF00107 Zinc-binding dehydrogenase VB13_RS00365 PF01554 MatE VB13_RS00370 PF00338 Ribosomal protein S10p/S20e VB13_RS00375 PF00297 Ribosomal protein L3 VB13_RS00380 PF00573 Ribosomal protein L4/L1 family VB13_RS00385 PF00276 Ribosomal protein L23 VB13_RS00390 PF00181 Ribosomal Proteins L2, RNA binding domain VB13_RS00390 PF03947 Ribosomal Proteins L2, C-terminal domain VB13_RS00395 PF00203 Ribosomal protein S19 VB13_RS00400 PF00237 Ribosomal protein L22p/L17e VB13_RS00405 PF07650 KH domain VB13_RS00405 PF00189 Ribosomal protein S3, C-terminal domain VB13_RS00410 PF00252 Ribosomal protein L16p/L10e VB13_RS00415 PF00831 Ribosomal L29 protein VB13_RS00420 PF00366 Ribosomal protein S17 VB13_RS00425 PF00238 Ribosomal protein L14p/L23e VB13_RS00430 PF00467 KOW motif VB13_RS00430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VB13_RS00435 PF00281 Ribosomal protein L5 VB13_RS00435 PF00673 ribosomal L5P family C-terminus VB13_RS00440 PF00253 Ribosomal protein S14p/S29e VB13_RS00445 PF00410 Ribosomal protein S8 VB13_RS00450 PF00347 Ribosomal protein L6 VB13_RS00455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VB13_RS00460 PF00333 Ribosomal protein S5, N-terminal domain VB13_RS00460 PF03719 Ribosomal protein S5, C-terminal domain VB13_RS00465 PF00327 Ribosomal protein L30p/L7e VB13_RS00470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VB13_RS00475 PF00344 SecY translocase VB13_RS00485 PF01176 Translation initiation factor 1A / IF-1 VB13_RS00490 PF00444 Ribosomal protein L36 VB13_RS00495 PF00416 Ribosomal protein S13/S18 VB13_RS00500 PF00411 Ribosomal protein S11 VB13_RS00505 PF01000 RNA polymerase Rpb3/RpoA insert domain VB13_RS00505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VB13_RS00505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VB13_RS00510 PF01196 Ribosomal protein L17 VB13_RS00610 PF01047 MarR family VB13_RS00615 PF00005 ABC transporter VB13_RS00620 PF00950 ABC 3 transport family VB13_RS00630 PF01479 S4 domain VB13_RS00630 PF00579 tRNA synthetases class I (W and Y) VB13_RS00635 PF00912 Transglycosylase VB13_RS00635 PF00905 Penicillin binding protein transpeptidase domain VB13_RS00640 PF04560 RNA polymerase Rpb2, domain 7 VB13_RS00640 PF00562 RNA polymerase Rpb2, domain 6 VB13_RS00640 PF10385 RNA polymerase beta subunit external 1 domain VB13_RS00640 PF04561 RNA polymerase Rpb2, domain 2 VB13_RS00640 PF04563 RNA polymerase beta subunit VB13_RS00640 PF04565 RNA polymerase Rpb2, domain 3 VB13_RS00645 PF04997 RNA polymerase Rpb1, domain 1 VB13_RS00645 PF00623 RNA polymerase Rpb1, domain 2 VB13_RS00645 PF04983 RNA polymerase Rpb1, domain 3 VB13_RS00645 PF05000 RNA polymerase Rpb1, domain 4 VB13_RS00645 PF04998 RNA polymerase Rpb1, domain 5 VB13_RS00655 PF00437 Type II/IV secretion system protein VB13_RS00660 PF00482 Type II secretion system (T2SS), protein F VB13_RS00665 PF07963 Prokaryotic N-terminal methylation motif VB13_RS00695 PF00871 Acetokinase family VB13_RS00710 PF05343 M42 glutamyl aminopeptidase VB13_RS00715 PF01609 Transposase DDE domain VB13_RS00715 PF13808 DDE_Tnp_1-associated VB13_RS00725 PF00085 Thioredoxin VB13_RS00730 PF01588 Putative tRNA binding domain VB13_RS00730 PF14794 Domain of unknown function (DUF4479) VB13_RS00735 PF00436 Single-strand binding protein family VB13_RS00740 PF01712 Deoxynucleoside kinase VB13_RS00745 PF01207 Dihydrouridine synthase (Dus) VB13_RS00750 PF01430 Hsp33 protein VB13_RS00760 PF08341 Thioester domain VB13_RS00760 PF17802 Prealbumin-like fold domain VB13_RS00770 PF12892 Spy0128-like isopeptide containing domain VB13_RS00775 PF04203 Sortase domain VB13_RS00800 PF02667 Short chain fatty acid transporter VB13_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VB13_RS00805 PF03466 LysR substrate binding domain VB13_RS00810 PF00108 Thiolase, N-terminal domain VB13_RS00810 PF02803 Thiolase, C-terminal domain VB13_RS00815 PF01144 Coenzyme A transferase VB13_RS00820 PF01144 Coenzyme A transferase VB13_RS00830 PF01042 Endoribonuclease L-PSP VB13_RS00845 PF01496 V-type ATPase 116kDa subunit family VB13_RS00850 PF00137 ATP synthase subunit C VB13_RS00860 PF01992 ATP synthase (C/AC39) subunit VB13_RS00865 PF01990 ATP synthase (F/14-kDa) subunit VB13_RS00870 PF02874 ATP synthase alpha/beta family, beta-barrel domain VB13_RS00870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VB13_RS00870 PF16886 ATPsynthase alpha/beta subunit N-term extension VB13_RS00875 PF02874 ATP synthase alpha/beta family, beta-barrel domain VB13_RS00875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VB13_RS00880 PF01813 ATP synthase subunit D VB13_RS00895 PF00709 Adenylosuccinate synthetase VB13_RS00900 PF02608 ABC transporter substrate-binding protein PnrA-like VB13_RS00905 PF00467 KOW motif VB13_RS00905 PF02357 Transcription termination factor nusG VB13_RS00920 PF01289 Thiol-activated cytolysin VB13_RS00920 PF17440 Thiol-activated cytolysin beta sandwich domain VB13_RS00945 PF01053 Cys/Met metabolism PLP-dependent enzyme VB13_RS00950 PF08264 Anticodon-binding domain of tRNA VB13_RS00950 PF09334 tRNA synthetases class I (M) VB13_RS00950 PF13603 Leucyl-tRNA synthetase, Domain 2 VB13_RS00950 PF00133 tRNA synthetases class I (I, L, M and V) VB13_RS00955 PF03611 PTS system sugar-specific permease component VB13_RS00960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS00965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VB13_RS00970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VB13_RS00975 PF01261 Xylose isomerase-like TIM barrel VB13_RS00980 PF00596 Class II Aldolase and Adducin N-terminal domain VB13_RS00995 PF00571 CBS domain VB13_RS00995 PF00005 ABC transporter VB13_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01005 PF01367 5'-3' exonuclease, C-terminal SAM fold VB13_RS01005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VB13_RS01005 PF00476 DNA polymerase family A VB13_RS01015 PF01475 Ferric uptake regulator family VB13_RS01025 PF11922 Domain of unknown function (DUF3440) VB13_RS01025 PF01507 Phosphoadenosine phosphosulfate reductase family VB13_RS01030 PF02195 ParB-like nuclease domain VB13_RS01050 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VB13_RS01050 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VB13_RS01065 PF01702 Queuine tRNA-ribosyltransferase VB13_RS01075 PF02632 BioY family VB13_RS01080 PF12706 Beta-lactamase superfamily domain VB13_RS01085 PF14437 MafB19-like deaminase VB13_RS01100 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain VB13_RS01100 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain VB13_RS01105 PF00342 Phosphoglucose isomerase VB13_RS01115 PF01694 Rhomboid family VB13_RS01120 PF00483 Nucleotidyl transferase VB13_RS01125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VB13_RS01125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VB13_RS01135 PF00005 ABC transporter VB13_RS01135 PF00664 ABC transporter transmembrane region VB13_RS01140 PF00005 ABC transporter VB13_RS01140 PF00664 ABC transporter transmembrane region VB13_RS01145 PF02677 Epoxyqueuosine reductase QueH VB13_RS01150 PF00692 dUTPase VB13_RS01155 PF18073 Rubredoxin metal binding domain VB13_RS01160 PF00484 Carbonic anhydrase VB13_RS01165 PF01987 Mitochondrial biogenesis AIM24 VB13_RS01170 PF00749 tRNA synthetases class I (E and Q), catalytic domain VB13_RS01175 PF17203 Single cache domain 3 VB13_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS01175 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VB13_RS01175 PF00989 PAS fold VB13_RS01190 PF00825 Ribonuclease P VB13_RS01195 PF02096 60Kd inner membrane protein VB13_RS01200 PF01424 R3H domain VB13_RS01200 PF14804 Jag N-terminus VB13_RS01205 PF00468 Ribosomal protein L34 VB13_RS01210 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VB13_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01235 PF00701 Dihydrodipicolinate synthetase family VB13_RS01240 PF00480 ROK family VB13_RS01250 PF01026 TatD related DNase VB13_RS01255 PF13331 Domain of unknown function (DUF4093) VB13_RS01260 PF00398 Ribosomal RNA adenine dimethylase VB13_RS01265 PF16745 RsgA N-terminal domain VB13_RS01265 PF03193 RsgA GTPase VB13_RS01270 PF00834 Ribulose-phosphate 3 epimerase family VB13_RS01275 PF04263 Thiamin pyrophosphokinase, catalytic domain VB13_RS01275 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain VB13_RS01280 PF02646 RmuC family VB13_RS01285 PF01966 HD domain VB13_RS01290 PF09182 Bacterial purine repressor, N-terminal VB13_RS01290 PF00156 Phosphoribosyl transferase domain VB13_RS01300 PF00164 Ribosomal protein S12/S23 VB13_RS01305 PF00177 Ribosomal protein S7p/S5e VB13_RS01310 PF03144 Elongation factor Tu domain 2 VB13_RS01310 PF00009 Elongation factor Tu GTP binding domain VB13_RS01310 PF03764 Elongation factor G, domain IV VB13_RS01310 PF00679 Elongation factor G C-terminus VB13_RS01310 PF14492 Elongation Factor G, domain II VB13_RS01315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VB13_RS01315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VB13_RS01325 PF00005 ABC transporter VB13_RS01330 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01340 PF02673 Bacitracin resistance protein BacA VB13_RS01345 PF05389 Negative regulator of genetic competence (MecA) VB13_RS01350 PF00953 Glycosyl transferase family 4 VB13_RS01355 PF00005 ABC transporter VB13_RS01360 PF01458 Uncharacterized protein family (UPF0051) VB13_RS01365 PF00266 Aminotransferase class-V VB13_RS01370 PF01592 NifU-like N terminal domain VB13_RS01375 PF01458 Uncharacterized protein family (UPF0051) VB13_RS01380 PF00768 D-alanyl-D-alanine carboxypeptidase VB13_RS01380 PF07943 Penicillin-binding protein 5, C-terminal domain VB13_RS01385 PF00768 D-alanyl-D-alanine carboxypeptidase VB13_RS01385 PF07943 Penicillin-binding protein 5, C-terminal domain VB13_RS01390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VB13_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01400 PF12911 N-terminal TM domain of oligopeptide transport permease C VB13_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VB13_RS01405 PF00005 ABC transporter VB13_RS01410 PF00005 ABC transporter VB13_RS01410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VB13_RS01460 PF01926 50S ribosome-binding GTPase VB13_RS01465 PF01985 CRS1 / YhbY (CRM) domain VB13_RS01470 PF01467 Cytidylyltransferase-like VB13_RS01475 PF01966 HD domain VB13_RS01485 PF13649 Methyltransferase domain VB13_RS01490 PF05636 HIGH Nucleotidyl Transferase VB13_RS01495 PF01709 Transcriptional regulator VB13_RS01500 PF00497 Bacterial extracellular solute-binding proteins, family 3 VB13_RS01505 PF03180 NLPA lipoprotein VB13_RS01510 PF00005 ABC transporter VB13_RS01510 PF09383 NIL domain VB13_RS01515 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS01520 PF05525 Branched-chain amino acid transport protein VB13_RS01525 PF00375 Sodium:dicarboxylate symporter family VB13_RS01530 PF02080 TrkA-C domain VB13_RS01530 PF02254 TrkA-N domain VB13_RS01535 PF02386 Cation transport protein VB13_RS01540 PF02527 rRNA small subunit methyltransferase G VB13_RS01545 PF04011 LemA family VB13_RS01550 PF01435 Peptidase family M48 VB13_RS01560 PF00072 Response regulator receiver domain VB13_RS01560 PF00486 Transcriptional regulatory protein, C terminal VB13_RS01565 PF18719 ArlS sensor domain VB13_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS01565 PF00512 His Kinase A (phospho-acceptor) domain VB13_RS01570 PF03477 ATP cone domain VB13_RS01580 PF07319 Primosomal protein DnaI N-terminus VB13_RS01580 PF01695 IstB-like ATP binding protein VB13_RS01585 PF01926 50S ribosome-binding GTPase VB13_RS01585 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VB13_RS01590 PF00176 SNF2 family N-terminal domain VB13_RS01590 PF00271 Helicase conserved C-terminal domain VB13_RS01590 PF12419 SNF2 Helicase protein VB13_RS01600 PF08245 Mur ligase middle domain VB13_RS01600 PF02875 Mur ligase family, glutamate ligase domain VB13_RS01600 PF01225 Mur ligase family, catalytic domain VB13_RS01610 PF02618 YceG-like family VB13_RS01615 PF03449 Transcription elongation factor, N-terminal VB13_RS01615 PF01272 Transcription elongation factor, GreA/GreB, C-term VB13_RS01620 PF02096 60Kd inner membrane protein VB13_RS01625 PF00708 Acylphosphatase VB13_RS01630 PF00588 SpoU rRNA Methylase family VB13_RS01630 PF08032 RNA 2'-O ribose methyltransferase substrate binding VB13_RS01640 PF01027 Inhibitor of apoptosis-promoting Bax1 VB13_RS01645 PF03672 Uncharacterised protein family (UPF0154) VB13_RS01650 PF01177 Asp/Glu/Hydantoin racemase VB13_RS01655 PF01725 Ham1 family VB13_RS01675 PF02616 Segregation and condensation protein ScpA VB13_RS01680 PF04079 Segregation and condensation complex subunit ScpB VB13_RS01685 PF00849 RNA pseudouridylate synthase VB13_RS01685 PF01479 S4 domain VB13_RS01690 PF01809 Putative membrane protein insertion efficiency factor VB13_RS01695 PF00588 SpoU rRNA Methylase family VB13_RS01700 PF12822 ECF transporter, substrate-specific component VB13_RS01705 PF01569 PAP2 superfamily VB13_RS01710 PF04055 Radical SAM superfamily VB13_RS01710 PF16199 Radical_SAM C-terminal domain VB13_RS01715 PF06962 Putative rRNA methylase VB13_RS01720 PF03471 Transporter associated domain VB13_RS01720 PF01595 Cyclin M transmembrane N-terminal domain VB13_RS01720 PF00571 CBS domain VB13_RS01725 PF04055 Radical SAM superfamily VB13_RS01730 PF02833 DHHA2 domain VB13_RS01730 PF01368 DHH family VB13_RS01740 PF01032 FecCD transport family VB13_RS01745 PF01032 FecCD transport family VB13_RS01750 PF01497 Periplasmic binding protein VB13_RS01755 PF00005 ABC transporter VB13_RS01760 PF02875 Mur ligase family, glutamate ligase domain VB13_RS01760 PF08245 Mur ligase middle domain VB13_RS01765 PF01943 Polysaccharide biosynthesis protein VB13_RS01765 PF14667 Polysaccharide biosynthesis C-terminal domain VB13_RS01775 PF00574 Clp protease VB13_RS01780 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) VB13_RS01785 PF02223 Thymidylate kinase VB13_RS01790 PF09115 DNA polymerase III, delta subunit, C terminal VB13_RS01800 PF06156 Initiation control protein YabA VB13_RS01805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VB13_RS01815 PF03932 CutC family VB13_RS01820 PF03960 ArsC family VB13_RS01825 PF03372 Endonuclease/Exonuclease/phosphatase family VB13_RS01830 PF01070 FMN-dependent dehydrogenase VB13_RS01835 PF06280 Fn3-like domain VB13_RS01835 PF02225 PA domain VB13_RS01835 PF00082 Subtilase family VB13_RS01835 PF00746 LPXTG cell wall anchor motif VB13_RS01845 PF09334 tRNA synthetases class I (M) VB13_RS01845 PF01588 Putative tRNA binding domain VB13_RS01850 PF00268 Ribonucleotide reductase, small chain VB13_RS01855 PF07972 NrdI Flavodoxin like VB13_RS01860 PF08343 Ribonucleotide reductase N-terminal VB13_RS01860 PF02867 Ribonucleotide reductase, barrel domain VB13_RS01860 PF00317 Ribonucleotide reductase, all-alpha domain VB13_RS01865 PF03496 ADP-ribosyltransferase exoenzyme VB13_RS02015 PF14659 Phage integrase, N-terminal SAM-like domain VB13_RS02015 PF00589 Phage integrase family VB13_RS02030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VB13_RS02030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VB13_RS02035 PF07690 Major Facilitator Superfamily VB13_RS02040 PF00132 Bacterial transferase hexapeptide (six repeats) VB13_RS02040 PF14602 Hexapeptide repeat of succinyl-transferase VB13_RS02040 PF12804 MobA-like NTP transferase domain VB13_RS02045 PF00293 NUDIX domain VB13_RS02055 PF01048 Phosphorylase superfamily VB13_RS02070 PF01297 Zinc-uptake complex component A periplasmic VB13_RS02075 PF00005 ABC transporter VB13_RS02080 PF00950 ABC 3 transport family VB13_RS02085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VB13_RS02090 PF17854 FtsK alpha domain VB13_RS02090 PF09397 Ftsk gamma domain VB13_RS02090 PF01580 FtsK/SpoIIIE family VB13_RS02100 PF03946 Ribosomal protein L11, N-terminal domain VB13_RS02100 PF00298 Ribosomal protein L11, RNA binding domain VB13_RS02105 PF00687 Ribosomal protein L1p/L10e family VB13_RS02110 PF00696 Amino acid kinase family VB13_RS02115 PF01765 Ribosome recycling factor VB13_RS02120 PF17783 CvfB-like winged helix domain VB13_RS02120 PF13509 S1 domain VB13_RS02125 PF01625 Peptide methionine sulfoxide reductase VB13_RS02130 PF06855 YozE SAM-like fold VB13_RS02140 PF06100 MCRA family VB13_RS02145 PF02562 PhoH-like protein VB13_RS02150 PF03167 Uracil DNA glycosylase superfamily VB13_RS02155 PF02130 Uncharacterized protein family UPF0054 VB13_RS02160 PF01219 Prokaryotic diacylglycerol kinase VB13_RS02165 PF07650 KH domain VB13_RS02165 PF01926 50S ribosome-binding GTPase VB13_RS02170 PF13344 Haloacid dehalogenase-like hydrolase VB13_RS02170 PF00293 NUDIX domain VB13_RS02240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VB13_RS02240 PF06827 Zinc finger found in FPG and IleRS VB13_RS02240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VB13_RS02245 PF01121 Dephospho-CoA kinase VB13_RS02250 PF05872 Bacterial protein of unknown function (DUF853) VB13_RS02255 PF07690 Major Facilitator Superfamily VB13_RS02255 PF00083 Sugar (and other) transporter VB13_RS02260 PF00471 Ribosomal protein L33 VB13_RS02270 PF17876 Cold shock domain VB13_RS02270 PF08206 Ribonuclease B OB domain VB13_RS02270 PF00773 RNB domain VB13_RS02270 PF00575 S1 RNA binding domain VB13_RS02275 PF01668 SmpB protein VB13_RS02285 PF01470 Pyroglutamyl peptidase VB13_RS02300 PF00535 Glycosyl transferase family 2 VB13_RS02305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VB13_RS02310 PF00881 Nitroreductase family VB13_RS02315 PF00557 Metallopeptidase family M24 VB13_RS02315 PF01321 Creatinase/Prolidase N-terminal domain VB13_RS02320 PF00356 Bacterial regulatory proteins, lacI family VB13_RS02325 PF00534 Glycosyl transferases group 1 VB13_RS02325 PF13439 Glycosyltransferase Family 4 VB13_RS02330 PF00534 Glycosyl transferases group 1 VB13_RS02330 PF13439 Glycosyltransferase Family 4 VB13_RS02335 PF03129 Anticodon binding domain VB13_RS02335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VB13_RS02335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VB13_RS02335 PF02824 TGS domain VB13_RS02340 PF00005 ABC transporter VB13_RS02360 PF00108 Thiolase, N-terminal domain VB13_RS02360 PF02803 Thiolase, C-terminal domain VB13_RS02375 PF00072 Response regulator receiver domain VB13_RS02375 PF00486 Transcriptional regulatory protein, C terminal VB13_RS02380 PF00672 HAMP domain VB13_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS02380 PF13426 PAS domain VB13_RS02380 PF00512 His Kinase A (phospho-acceptor) domain VB13_RS02385 PF00753 Metallo-beta-lactamase superfamily VB13_RS02390 PF14622 Ribonuclease-III-like VB13_RS02390 PF00035 Double-stranded RNA binding motif VB13_RS02395 PF06470 SMC proteins Flexible Hinge Domain VB13_RS02395 PF02463 RecF/RecN/SMC N terminal domain VB13_RS02410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VB13_RS02410 PF08501 Shikimate dehydrogenase substrate binding domain VB13_RS02430 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) VB13_RS02445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VB13_RS02445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VB13_RS02445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VB13_RS02515 PF01336 OB-fold nucleic acid binding domain VB13_RS02515 PF00152 tRNA synthetases class II (D, K and N) VB13_RS02520 PF00206 Lyase VB13_RS02520 PF02655 ATP-grasp domain VB13_RS02525 PF17676 LD-carboxypeptidase C-terminal domain VB13_RS02525 PF02016 LD-carboxypeptidase N-terminal domain VB13_RS02530 PF13393 Histidyl-tRNA synthetase VB13_RS02530 PF03129 Anticodon binding domain VB13_RS02550 PF02881 SRP54-type protein, helical bundle domain VB13_RS02550 PF00448 SRP54-type protein, GTPase domain VB13_RS02555 PF07690 Major Facilitator Superfamily VB13_RS02560 PF00874 PRD domain VB13_RS02560 PF03123 CAT RNA binding domain VB13_RS02565 PF02378 Phosphotransferase system, EIIC VB13_RS02565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VB13_RS02565 PF00367 phosphotransferase system, EIIB VB13_RS02570 PF00232 Glycosyl hydrolase family 1 VB13_RS02575 PF09323 Domain of unknown function (DUF1980) VB13_RS02580 PF03773 Predicted permease VB13_RS02590 PF17674 HHH domain VB13_RS02590 PF16921 Tex protein YqgF-like domain VB13_RS02590 PF09371 Tex-like protein N-terminal domain VB13_RS02590 PF00575 S1 RNA binding domain VB13_RS02595 PF10263 SprT-like family VB13_RS02605 PF02603 HPr Serine kinase N terminus VB13_RS02605 PF07475 HPr Serine kinase C-terminal domain VB13_RS02610 PF01790 Prolipoprotein diacylglyceryl transferase VB13_RS02620 PF12732 YtxH-like protein VB13_RS02635 PF16325 Peptidase family U32 C-terminal domain VB13_RS02635 PF01136 Peptidase family U32 VB13_RS02640 PF02229 Transcriptional Coactivator p15 (PC4) VB13_RS02650 PF00152 tRNA synthetases class II (D, K and N) VB13_RS02650 PF01336 OB-fold nucleic acid binding domain VB13_RS02670 PF09515 Thiamine transporter protein (Thia_YuaJ) VB13_RS02690 PF00255 Glutathione peroxidase VB13_RS02695 PF08439 Oligopeptidase F VB13_RS02695 PF01432 Peptidase family M3 VB13_RS02700 PF00311 Phosphoenolpyruvate carboxylase VB13_RS02705 PF01098 Cell cycle protein VB13_RS02710 PF00009 Elongation factor Tu GTP binding domain VB13_RS02710 PF03144 Elongation factor Tu domain 2 VB13_RS02710 PF03143 Elongation factor Tu C-terminal domain VB13_RS02715 PF00121 Triosephosphate isomerase VB13_RS02735 PF01966 HD domain VB13_RS02745 PF00689 Cation transporting ATPase, C-terminus VB13_RS02745 PF00690 Cation transporter/ATPase, N-terminus VB13_RS02750 PF00356 Bacterial regulatory proteins, lacI family VB13_RS02760 PF03613 PTS system mannose/fructose/sorbose family IID component VB13_RS02765 PF03609 PTS system sorbose-specific iic component VB13_RS02770 PF03830 PTS system sorbose subfamily IIB component VB13_RS02775 PF07470 Glycosyl Hydrolase Family 88 VB13_RS02800 PF01081 KDPG and KHG aldolase VB13_RS02805 PF13419 Haloacid dehalogenase-like hydrolase VB13_RS02820 PF00005 ABC transporter VB13_RS02825 PF02687 FtsX-like permease family VB13_RS02825 PF18075 FtsX extracellular domain VB13_RS02830 PF00753 Metallo-beta-lactamase superfamily VB13_RS02840 PF13307 Helicase C-terminal domain VB13_RS02840 PF04851 Type III restriction enzyme, res subunit VB13_RS02840 PF00929 Exonuclease VB13_RS02845 PF00155 Aminotransferase class I and II VB13_RS02850 PF01336 OB-fold nucleic acid binding domain VB13_RS02850 PF00152 tRNA synthetases class II (D, K and N) VB13_RS02855 PF03668 P-loop ATPase protein family VB13_RS02860 PF01933 Uncharacterised protein family UPF0052 VB13_RS02865 PF02650 WhiA C-terminal HTH domain VB13_RS02865 PF14527 WhiA LAGLIDADG-like domain VB13_RS02865 PF10298 WhiA N-terminal LAGLIDADG-like domain VB13_RS02870 PF03577 Peptidase family C69 VB13_RS02875 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment VB13_RS02875 PF01297 Zinc-uptake complex component A periplasmic VB13_RS02880 PF00392 Bacterial regulatory proteins, gntR family VB13_RS02880 PF07702 UTRA domain VB13_RS02885 PF01380 SIS domain VB13_RS02890 PF01197 Ribosomal protein L31 VB13_RS02895 PF01368 DHH family VB13_RS02895 PF02272 DHHA1 domain VB13_RS02900 PF00258 Flavodoxin VB13_RS02910 PF00654 Voltage gated chloride channel VB13_RS02915 PF01245 Ribosomal protein L19 VB13_RS02930 PF00204 DNA gyrase B VB13_RS02930 PF00986 DNA gyrase B subunit, carboxyl terminus VB13_RS02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS02930 PF01751 Toprim domain VB13_RS02935 PF06160 Septation ring formation regulator, EzrA VB13_RS02945 PF00113 Enolase, C-terminal TIM barrel domain VB13_RS02945 PF03952 Enolase, N-terminal domain VB13_RS02995 PF00005 ABC transporter VB13_RS03015 PF06177 QueT transporter VB13_RS03020 PF01653 NAD-dependent DNA ligase adenylation domain VB13_RS03020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VB13_RS03020 PF12826 Helix-hairpin-helix motif VB13_RS03020 PF00533 BRCA1 C Terminus (BRCT) domain VB13_RS03020 PF03120 NAD-dependent DNA ligase OB-fold domain VB13_RS03025 PF00781 Diacylglycerol kinase catalytic domain VB13_RS03030 PF00137 ATP synthase subunit C VB13_RS03035 PF00119 ATP synthase A chain VB13_RS03040 PF00430 ATP synthase B/B' CF(0) VB13_RS03045 PF00213 ATP synthase delta (OSCP) subunit VB13_RS03050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VB13_RS03050 PF02874 ATP synthase alpha/beta family, beta-barrel domain VB13_RS03050 PF00306 ATP synthase alpha/beta chain, C terminal domain VB13_RS03055 PF00231 ATP synthase VB13_RS03060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VB13_RS03060 PF02874 ATP synthase alpha/beta family, beta-barrel domain VB13_RS03065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VB13_RS03065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VB13_RS03075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VB13_RS03090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VB13_RS03090 PF01409 tRNA synthetases class II core domain (F) VB13_RS03095 PF03483 B3/4 domain VB13_RS03095 PF03484 tRNA synthetase B5 domain VB13_RS03095 PF01588 Putative tRNA binding domain VB13_RS03095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VB13_RS03095 PF03147 Ferredoxin-fold anticodon binding domain VB13_RS03110 PF02687 FtsX-like permease family VB13_RS03115 PF00005 ABC transporter VB13_RS03120 PF04228 Putative neutral zinc metallopeptidase VB13_RS03125 PF12705 PD-(D/E)XK nuclease superfamily VB13_RS03130 PF12705 PD-(D/E)XK nuclease superfamily VB13_RS03130 PF00580 UvrD/REP helicase N-terminal domain VB13_RS03130 PF13361 UvrD-like helicase C-terminal domain VB13_RS03135 PF00497 Bacterial extracellular solute-binding proteins, family 3 VB13_RS03140 PF01165 Ribosomal protein S21 VB13_RS03145 PF01741 Large-conductance mechanosensitive channel, MscL VB13_RS03150 PF10410 DnaB-helicase binding domain of primase VB13_RS03150 PF08275 DNA primase catalytic core, N-terminal domain VB13_RS03150 PF01807 CHC2 zinc finger VB13_RS03155 PF04545 Sigma-70, region 4 VB13_RS03155 PF03979 Sigma-70 factor, region 1.1 VB13_RS03155 PF00140 Sigma-70 factor, region 1.2 VB13_RS03155 PF04539 Sigma-70 region 3 VB13_RS03155 PF04542 Sigma-70 region 2 VB13_RS03160 PF01883 Iron-sulfur cluster assembly protein VB13_RS03165 PF04321 RmlD substrate binding domain VB13_RS03175 PF02709 N-terminal domain of galactosyltransferase VB13_RS03175 PF00535 Glycosyl transferase family 2 VB13_RS03185 PF00005 ABC transporter VB13_RS03190 PF00535 Glycosyl transferase family 2 VB13_RS03205 PF00535 Glycosyl transferase family 2 VB13_RS03225 PF07687 Peptidase dimerisation domain VB13_RS03225 PF01546 Peptidase family M20/M25/M40 VB13_RS03245 PF02224 Cytidylate kinase VB13_RS03250 PF00707 Translation initiation factor IF-3, C-terminal domain VB13_RS03250 PF05198 Translation initiation factor IF-3, N-terminal domain VB13_RS03255 PF01632 Ribosomal protein L35 VB13_RS03260 PF00453 Ribosomal protein L20 VB13_RS03265 PF00884 Sulfatase VB13_RS03270 PF10672 S-adenosylmethionine-dependent methyltransferase VB13_RS03270 PF17785 PUA-like domain VB13_RS03275 PF01487 Type I 3-dehydroquinase VB13_RS03280 PF01264 Chorismate synthase VB13_RS03285 PF06133 Control of competence regulator ComK, YlbF/YmcA VB13_RS03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS03290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VB13_RS03295 PF08245 Mur ligase middle domain VB13_RS03295 PF02875 Mur ligase family, glutamate ligase domain VB13_RS03305 PF00266 Aminotransferase class-V VB13_RS03310 PF02926 THUMP domain VB13_RS03310 PF02568 Thiamine biosynthesis protein (ThiI) VB13_RS03315 PF09587 Bacterial capsule synthesis protein PGA_cap VB13_RS03320 PF00829 Ribosomal prokaryotic L21 protein VB13_RS03330 PF01016 Ribosomal L27 protein VB13_RS03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VB13_RS03335 PF03466 LysR substrate binding domain VB13_RS03340 PF01252 Signal peptidase (SPase) II VB13_RS03345 PF00849 RNA pseudouridylate synthase VB13_RS03345 PF01479 S4 domain VB13_RS03350 PF00156 Phosphoribosyl transferase domain VB13_RS03355 PF00860 Permease family VB13_RS03360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VB13_RS03360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VB13_RS03365 PF00117 Glutamine amidotransferase class-I VB13_RS03365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VB13_RS03370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VB13_RS03370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VB13_RS03370 PF02142 MGS-like domain VB13_RS03375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VB13_RS03380 PF00005 ABC transporter VB13_RS03385 PF02687 FtsX-like permease family VB13_RS03385 PF12704 MacB-like periplasmic core domain VB13_RS03390 PF03009 Glycerophosphoryl diester phosphodiesterase family VB13_RS03395 PF00886 Ribosomal protein S16 VB13_RS03425 PF01782 RimM N-terminal domain VB13_RS03425 PF05239 PRC-barrel domain VB13_RS03430 PF01746 tRNA (Guanine-1)-methyltransferase VB13_RS03435 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS03445 PF02558 Ketopantoate reductase PanE/ApbA VB13_RS03445 PF08546 Ketopantoate reductase PanE/ApbA C terminal VB13_RS03450 PF00455 DeoR C terminal sensor domain VB13_RS03450 PF08220 DeoR-like helix-turn-helix domain VB13_RS03455 PF00294 pfkB family carbohydrate kinase VB13_RS03460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VB13_RS03460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS03465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VB13_RS03465 PF01476 LysM domain VB13_RS03470 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VB13_RS03470 PF01476 LysM domain VB13_RS03485 PF09028 Mac 1 VB13_RS03490 PF00334 Nucleoside diphosphate kinase VB13_RS03500 PF02645 Uncharacterised protein, DegV family COG1307 VB13_RS03505 PF01743 Poly A polymerase head domain VB13_RS03505 PF12627 Probable RNA and SrmB- binding site of polymerase A VB13_RS03505 PF13735 tRNA nucleotidyltransferase domain 2 putative VB13_RS03510 PF16326 ABC transporter C-terminal domain VB13_RS03510 PF00005 ABC transporter VB13_RS03510 PF12848 ABC transporter VB13_RS03515 PF01327 Polypeptide deformylase VB13_RS03520 PF02872 5'-nucleotidase, C-terminal domain VB13_RS03520 PF17936 Bacterial Ig domain VB13_RS03520 PF00149 Calcineurin-like phosphoesterase VB13_RS03525 PF04607 Region found in RelA / SpoT proteins VB13_RS03530 PF00072 Response regulator receiver domain VB13_RS03530 PF00486 Transcriptional regulatory protein, C terminal VB13_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS03535 PF00512 His Kinase A (phospho-acceptor) domain VB13_RS03540 PF10509 Galactokinase galactose-binding signature VB13_RS03540 PF08544 GHMP kinases C terminal VB13_RS03540 PF00288 GHMP kinases N terminal domain VB13_RS03550 PF08544 GHMP kinases C terminal VB13_RS03550 PF00288 GHMP kinases N terminal domain VB13_RS03555 PF01070 FMN-dependent dehydrogenase VB13_RS03560 PF00368 Hydroxymethylglutaryl-coenzyme A reductase VB13_RS03565 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal VB13_RS03565 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal VB13_RS03570 PF00303 Thymidylate synthase VB13_RS03575 PF00186 Dihydrofolate reductase VB13_RS03585 PF07724 AAA domain (Cdc48 subfamily) VB13_RS03585 PF10431 C-terminal, D2-small domain, of ClpB protein VB13_RS03585 PF06689 ClpX C4-type zinc finger VB13_RS03590 PF01926 50S ribosome-binding GTPase VB13_RS03600 PF00004 ATPase family associated with various cellular activities (AAA) VB13_RS03600 PF07724 AAA domain (Cdc48 subfamily) VB13_RS03600 PF17871 AAA lid domain VB13_RS03600 PF10431 C-terminal, D2-small domain, of ClpB protein VB13_RS03605 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VB13_RS03610 PF01676 Metalloenzyme superfamily VB13_RS03615 PF03960 ArsC family VB13_RS03620 PF01048 Phosphorylase superfamily VB13_RS03625 PF01048 Phosphorylase superfamily VB13_RS03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VB13_RS03635 PF03466 LysR substrate binding domain VB13_RS03645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VB13_RS03650 PF00156 Phosphoribosyl transferase domain VB13_RS03655 PF01425 Amidase VB13_RS03660 PF00497 Bacterial extracellular solute-binding proteins, family 3 VB13_RS03665 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS03670 PF03167 Uracil DNA glycosylase superfamily VB13_RS03675 PF01979 Amidohydrolase family VB13_RS03680 PF02660 Glycerol-3-phosphate acyltransferase VB13_RS03685 PF00204 DNA gyrase B VB13_RS03685 PF00986 DNA gyrase B subunit, carboxyl terminus VB13_RS03685 PF01751 Toprim domain VB13_RS03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS03690 PF00521 DNA gyrase/topoisomerase IV, subunit A VB13_RS03690 PF03989 DNA gyrase C-terminal domain, beta-propeller VB13_RS03695 PF01063 Amino-transferase class IV VB13_RS03715 PF00575 S1 RNA binding domain VB13_RS03730 PF00581 Rhodanese-like domain VB13_RS03730 PF12368 Rhodanase C-terminal VB13_RS03730 PF17773 UPF0176 acylphosphatase like domain VB13_RS03755 PF13167 GTP-binding GTPase N-terminal VB13_RS03755 PF01926 50S ribosome-binding GTPase VB13_RS03755 PF16360 GTP-binding GTPase Middle Region VB13_RS03760 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VB13_RS03760 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VB13_RS03765 PF00753 Metallo-beta-lactamase superfamily VB13_RS03765 PF12706 Beta-lactamase superfamily domain VB13_RS03770 PF00106 short chain dehydrogenase VB13_RS03775 PF01368 DHH family VB13_RS03775 PF02272 DHHA1 domain VB13_RS03775 PF17768 RecJ OB domain VB13_RS03775 PF10141 Single-strand DNA-specific exonuclease, C terminal domain VB13_RS03780 PF00156 Phosphoribosyl transferase domain VB13_RS03790 PF00633 Helix-hairpin-helix motif VB13_RS03790 PF00730 HhH-GPD superfamily base excision DNA repair protein VB13_RS03790 PF10576 Iron-sulfur binding domain of endonuclease III VB13_RS03795 PF04816 tRNA (adenine(22)-N(1))-methyltransferase VB13_RS03800 PF01784 NIF3 (NGG1p interacting factor 3) VB13_RS03805 PF01266 FAD dependent oxidoreductase VB13_RS03810 PF00483 Nucleotidyl transferase VB13_RS03815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VB13_RS03820 PF16363 GDP-mannose 4,6 dehydratase VB13_RS03825 PF00293 NUDIX domain VB13_RS03830 PF01594 AI-2E family transporter VB13_RS03840 PF05670 NFACT protein RNA binding domain VB13_RS03855 PF00005 ABC transporter VB13_RS03860 PF00753 Metallo-beta-lactamase superfamily VB13_RS03860 PF17770 Ribonuclease J C-terminal domain VB13_RS03860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VB13_RS03865 PF00756 Putative esterase VB13_RS03875 PF16326 ABC transporter C-terminal domain VB13_RS03875 PF12848 ABC transporter VB13_RS03875 PF00005 ABC transporter VB13_RS03880 PF00676 Dehydrogenase E1 component VB13_RS03885 PF02780 Transketolase, C-terminal domain VB13_RS03885 PF02779 Transketolase, pyrimidine binding domain VB13_RS03885 PF00364 Biotin-requiring enzyme VB13_RS03890 PF02817 e3 binding domain VB13_RS03890 PF00364 Biotin-requiring enzyme VB13_RS03890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VB13_RS03895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VB13_RS03895 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS03900 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VB13_RS03900 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VB13_RS03900 PF02278 Polysaccharide lyase family 8, super-sandwich domain VB13_RS03905 PF10437 Bacterial lipoate protein ligase C-terminus VB13_RS03905 PF03099 Biotin/lipoate A/B protein ligase family VB13_RS03910 PF07685 CobB/CobQ-like glutamine amidotransferase domain VB13_RS03915 PF08245 Mur ligase middle domain VB13_RS03915 PF08353 Domain of unknown function (DUF1727) VB13_RS03920 PF02457 DisA bacterial checkpoint controller nucleotide-binding VB13_RS03930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VB13_RS03930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VB13_RS03930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VB13_RS03930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VB13_RS03940 PF04055 Radical SAM superfamily VB13_RS03940 PF06969 HemN C-terminal domain VB13_RS03950 PF13344 Haloacid dehalogenase-like hydrolase VB13_RS03960 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 VB13_RS03960 PF13395 HNH endonuclease VB13_RS03960 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 VB13_RS03960 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 VB13_RS03965 PF01867 CRISPR associated protein Cas1 VB13_RS03970 PF09827 CRISPR associated protein Cas2 VB13_RS03975 PF09711 CRISPR-associated protein (Cas_Csn2) VB13_RS03985 PF03144 Elongation factor Tu domain 2 VB13_RS03985 PF00009 Elongation factor Tu GTP binding domain VB13_RS03985 PF00679 Elongation factor G C-terminus VB13_RS03985 PF06421 GTP-binding protein LepA C-terminus VB13_RS03985 PF14492 Elongation Factor G, domain II VB13_RS03990 PF02370 M protein repeat VB13_RS03990 PF00746 LPXTG cell wall anchor motif VB13_RS03995 PF01641 SelR domain VB13_RS04000 PF03601 Conserved hypothetical protein 698 VB13_RS04010 PF03830 PTS system sorbose subfamily IIB component VB13_RS04015 PF03609 PTS system sorbose-specific iic component VB13_RS04020 PF03613 PTS system mannose/fructose/sorbose family IID component VB13_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS04025 PF06580 Histidine kinase VB13_RS04030 PF12833 Helix-turn-helix domain VB13_RS04030 PF00072 Response regulator receiver domain VB13_RS04040 PF00171 Aldehyde dehydrogenase family VB13_RS04045 PF01541 GIY-YIG catalytic domain VB13_RS04045 PF08459 UvrC Helix-hairpin-helix N-terminal VB13_RS04045 PF02151 UvrB/uvrC motif VB13_RS04050 PF00881 Nitroreductase family VB13_RS04055 PF01546 Peptidase family M20/M25/M40 VB13_RS04060 PF01926 50S ribosome-binding GTPase VB13_RS04060 PF12631 MnmE helical domain VB13_RS04060 PF10396 GTP-binding protein TrmE N-terminus VB13_RS04065 PF00466 Ribosomal protein L10 VB13_RS04070 PF00542 Ribosomal protein L7/L12 C-terminal domain VB13_RS04070 PF16320 Ribosomal protein L7/L12 dimerisation domain VB13_RS04075 PF07943 Penicillin-binding protein 5, C-terminal domain VB13_RS04075 PF00768 D-alanyl-D-alanine carboxypeptidase VB13_RS04085 PF02875 Mur ligase family, glutamate ligase domain VB13_RS04085 PF08245 Mur ligase middle domain VB13_RS04090 PF01227 GTP cyclohydrolase I VB13_RS04095 PF00809 Pterin binding enzyme VB13_RS04100 PF02152 Dihydroneopterin aldolase VB13_RS04105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VB13_RS04110 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VB13_RS04110 PF01565 FAD binding domain VB13_RS04115 PF08402 TOBE domain VB13_RS04115 PF00005 ABC transporter VB13_RS04120 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04125 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04130 PF13416 Bacterial extracellular solute-binding protein VB13_RS04135 PF00072 Response regulator receiver domain VB13_RS04140 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VB13_RS04140 PF17203 Single cache domain 3 VB13_RS04140 PF00989 PAS fold VB13_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS04145 PF03390 2-hydroxycarboxylate transporter family VB13_RS04150 PF03949 Malic enzyme, NAD binding domain VB13_RS04150 PF00390 Malic enzyme, N-terminal domain VB13_RS04155 PF13823 Alcohol dehydrogenase GroES-associated VB13_RS04155 PF00107 Zinc-binding dehydrogenase VB13_RS04155 PF08240 Alcohol dehydrogenase GroES-like domain VB13_RS04160 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) VB13_RS04165 PF00654 Voltage gated chloride channel VB13_RS04175 PF01594 AI-2E family transporter VB13_RS04180 PF04002 RadC-like JAB domain VB13_RS04185 PF07722 Peptidase C26 VB13_RS04190 PF02629 CoA binding domain VB13_RS04190 PF06971 Putative DNA-binding protein N-terminus VB13_RS04200 PF00266 Aminotransferase class-V VB13_RS04205 PF14572 Phosphoribosyl synthetase-associated domain VB13_RS04205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VB13_RS04215 PF04607 Region found in RelA / SpoT proteins VB13_RS04220 PF01513 ATP-NAD kinase VB13_RS04225 PF00849 RNA pseudouridylate synthase VB13_RS04225 PF01479 S4 domain VB13_RS04230 PF01515 Phosphate acetyl/butaryl transferase VB13_RS04245 PF00005 ABC transporter VB13_RS04245 PF00571 CBS domain VB13_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04255 PF00478 IMP dehydrogenase / GMP reductase domain VB13_RS04260 PF00156 Phosphoribosyl transferase domain VB13_RS04265 PF00860 Permease family VB13_RS04270 PF02424 ApbE family VB13_RS04275 PF01361 Tautomerase enzyme VB13_RS04280 PF00265 Thymidine kinase VB13_RS04285 PF03462 PCRF domain VB13_RS04285 PF00472 RF-1 domain VB13_RS04290 PF05175 Methyltransferase small domain VB13_RS04305 PF00464 Serine hydroxymethyltransferase VB13_RS04320 PF00005 ABC transporter VB13_RS04320 PF00664 ABC transporter transmembrane region VB13_RS04325 PF00005 ABC transporter VB13_RS04325 PF00664 ABC transporter transmembrane region VB13_RS04330 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS04330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VB13_RS04335 PF00056 lactate/malate dehydrogenase, NAD binding domain VB13_RS04335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VB13_RS04340 PF00521 DNA gyrase/topoisomerase IV, subunit A VB13_RS04340 PF03989 DNA gyrase C-terminal domain, beta-propeller VB13_RS04345 PF04203 Sortase domain VB13_RS04350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VB13_RS04365 PF03006 Haemolysin-III related VB13_RS04375 PF01926 50S ribosome-binding GTPase VB13_RS04380 PF01351 Ribonuclease HII VB13_RS04385 PF18255 DNA processing protein A sterile alpha motif domain VB13_RS04385 PF02481 DNA recombination-mediator protein A VB13_RS04390 PF01751 Toprim domain VB13_RS04390 PF01131 DNA topoisomerase VB13_RS04390 PF01396 Topoisomerase DNA binding C4 zinc finger VB13_RS04405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VB13_RS04405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VB13_RS04420 PF01134 Glucose inhibited division protein A VB13_RS04425 PF02436 Conserved carboxylase domain VB13_RS04425 PF00682 HMGL-like VB13_RS04425 PF00364 Biotin-requiring enzyme VB13_RS04435 PF00364 Biotin-requiring enzyme VB13_RS04440 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VB13_RS04445 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VB13_RS04460 PF00364 Biotin-requiring enzyme VB13_RS04460 PF02436 Conserved carboxylase domain VB13_RS04460 PF00682 HMGL-like VB13_RS04465 PF08218 Citrate lyase ligase C-terminal domain VB13_RS04475 PF00589 Phage integrase family VB13_RS04475 PF13495 Phage integrase, N-terminal SAM-like domain VB13_RS04485 PF02978 Signal peptide binding domain VB13_RS04485 PF02881 SRP54-type protein, helical bundle domain VB13_RS04485 PF00448 SRP54-type protein, GTPase domain VB13_RS04490 PF04297 Putative helix-turn-helix protein, YlxM / p13 like VB13_RS04495 PF07702 UTRA domain VB13_RS04495 PF00392 Bacterial regulatory proteins, gntR family VB13_RS04505 PF02540 NAD synthase VB13_RS04505 PF00958 GMP synthase C terminal domain VB13_RS04505 PF00117 Glutamine amidotransferase class-I VB13_RS04515 PF12848 ABC transporter VB13_RS04515 PF00005 ABC transporter VB13_RS04525 PF02581 Thiamine monophosphate synthase VB13_RS04525 PF08543 Phosphomethylpyrimidine kinase VB13_RS04530 PF00155 Aminotransferase class I and II VB13_RS04530 PF00392 Bacterial regulatory proteins, gntR family VB13_RS04535 PF03477 ATP cone domain VB13_RS04535 PF13597 Anaerobic ribonucleoside-triphosphate reductase VB13_RS04540 PF13091 PLD-like domain VB13_RS04545 PF01268 Formate--tetrahydrofolate ligase VB13_RS04550 PF03099 Biotin/lipoate A/B protein ligase family VB13_RS04550 PF10437 Bacterial lipoate protein ligase C-terminus VB13_RS04560 PF01661 Macro domain VB13_RS04565 PF01597 Glycine cleavage H-protein VB13_RS04570 PF00296 Luciferase-like monooxygenase VB13_RS04575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VB13_RS04580 PF03099 Biotin/lipoate A/B protein ligase family VB13_RS04585 PF04127 DNA / pantothenate metabolism flavoprotein VB13_RS04585 PF02441 Flavoprotein VB13_RS04590 PF02441 Flavoprotein VB13_RS04595 PF12822 ECF transporter, substrate-specific component VB13_RS04600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VB13_RS04600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VB13_RS04600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VB13_RS04600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VB13_RS04605 PF02653 Branched-chain amino acid transport system / permease component VB13_RS04610 PF02653 Branched-chain amino acid transport system / permease component VB13_RS04615 PF00005 ABC transporter VB13_RS04620 PF02608 ABC transporter substrate-binding protein PnrA-like VB13_RS04625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VB13_RS04630 PF05175 Methyltransferase small domain VB13_RS04635 PF00485 Phosphoribulokinase / Uridine kinase family VB13_RS04640 PF01649 Ribosomal protein S20 VB13_RS04645 PF00512 His Kinase A (phospho-acceptor) domain VB13_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS04650 PF00072 Response regulator receiver domain VB13_RS04650 PF00486 Transcriptional regulatory protein, C terminal VB13_RS04655 PF01433 Peptidase family M1 domain VB13_RS04655 PF11838 ERAP1-like C-terminal domain VB13_RS04660 PF01895 PhoU domain VB13_RS04665 PF00005 ABC transporter VB13_RS04670 PF00005 ABC transporter VB13_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04685 PF12849 PBP superfamily domain VB13_RS04690 PF01189 16S rRNA methyltransferase RsmB/F VB13_RS04690 PF17126 RsmF rRNA methyltransferase first C-terminal domain VB13_RS04690 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VB13_RS04695 PF00459 Inositol monophosphatase family VB13_RS04700 PF05256 Uncharacterised protein family (UPF0223) VB13_RS04705 PF03960 ArsC family VB13_RS04710 PF01687 Riboflavin kinase VB13_RS04710 PF06574 FAD synthetase VB13_RS04715 PF16198 tRNA pseudouridylate synthase B C-terminal domain VB13_RS04715 PF01509 TruB family pseudouridylate synthase (N terminal domain) VB13_RS04740 PF00005 ABC transporter VB13_RS04740 PF02687 FtsX-like permease family VB13_RS04740 PF12704 MacB-like periplasmic core domain VB13_RS04755 PF03780 Asp23 family, cell envelope-related function VB13_RS04760 PF05532 CsbD-like VB13_RS04765 PF03780 Asp23 family, cell envelope-related function VB13_RS04785 PF13361 UvrD-like helicase C-terminal domain VB13_RS04785 PF00580 UvrD/REP helicase N-terminal domain VB13_RS04790 PF01235 Sodium:alanine symporter family VB13_RS04795 PF16916 Dimerisation domain of Zinc Transporter VB13_RS04795 PF01545 Cation efflux family VB13_RS04800 PF07373 CAMP factor (Cfa) VB13_RS04805 PF00497 Bacterial extracellular solute-binding proteins, family 3 VB13_RS04810 PF00005 ABC transporter VB13_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04820 PF03831 PhnA domain VB13_RS04820 PF08274 PhnA Zinc-Ribbon VB13_RS04825 PF01380 SIS domain VB13_RS04830 PF10502 Signal peptidase, peptidase S26 VB13_RS04835 PF02887 Pyruvate kinase, alpha/beta domain VB13_RS04835 PF00224 Pyruvate kinase, barrel domain VB13_RS04840 PF00365 Phosphofructokinase VB13_RS04845 PF01336 OB-fold nucleic acid binding domain VB13_RS04845 PF02811 PHP domain VB13_RS04845 PF14579 Helix-hairpin-helix motif VB13_RS04845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VB13_RS04845 PF07733 Bacterial DNA polymerase III alpha NTPase domain VB13_RS04850 PF00392 Bacterial regulatory proteins, gntR family VB13_RS04855 PF00005 ABC transporter VB13_RS04880 PF00343 Carbohydrate phosphorylase VB13_RS04885 PF02446 4-alpha-glucanotransferase VB13_RS04890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VB13_RS04890 PF00356 Bacterial regulatory proteins, lacI family VB13_RS04895 PF13416 Bacterial extracellular solute-binding protein VB13_RS04900 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS04910 PF13936 Helix-turn-helix domain VB13_RS04915 PF07859 alpha/beta hydrolase fold VB13_RS04915 PF00934 PE family VB13_RS04920 PF04914 DltD protein VB13_RS04925 PF00550 Phosphopantetheine attachment site VB13_RS04930 PF03062 MBOAT, membrane-bound O-acyltransferase family VB13_RS04935 PF00501 AMP-binding enzyme VB13_RS04935 PF13193 AMP-binding enzyme C-terminal domain VB13_RS04945 PF17757 UvrB interaction domain VB13_RS04945 PF00271 Helicase conserved C-terminal domain VB13_RS04945 PF12344 Ultra-violet resistance protein B VB13_RS04945 PF02151 UvrB/uvrC motif VB13_RS04945 PF04851 Type III restriction enzyme, res subunit VB13_RS04950 PF00497 Bacterial extracellular solute-binding proteins, family 3 VB13_RS04955 PF00005 ABC transporter VB13_RS04965 PF02378 Phosphotransferase system, EIIC VB13_RS04975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VB13_RS04980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS04985 PF00874 PRD domain VB13_RS04985 PF08279 HTH domain VB13_RS04985 PF05043 Mga helix-turn-helix domain VB13_RS04985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VB13_RS04995 PF00232 Glycosyl hydrolase family 1 VB13_RS05010 PF01926 50S ribosome-binding GTPase VB13_RS05010 PF01018 GTP1/OBG VB13_RS05010 PF09269 Domain of unknown function (DUF1967) VB13_RS05025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VB13_RS05025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VB13_RS05055 PF01479 S4 domain VB13_RS05055 PF00849 RNA pseudouridylate synthase VB13_RS05065 PF07690 Major Facilitator Superfamily VB13_RS05070 PF08903 Domain of unknown function (DUF1846) VB13_RS05085 PF01938 TRAM domain VB13_RS05085 PF05958 tRNA (Uracil-5-)-methyltransferase VB13_RS05090 PF03816 Cell envelope-related transcriptional attenuator domain VB13_RS05095 PF01202 Shikimate kinase VB13_RS05100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VB13_RS05110 PF00557 Metallopeptidase family M24 VB13_RS05115 PF03061 Thioesterase superfamily VB13_RS05115 PF00392 Bacterial regulatory proteins, gntR family VB13_RS05115 PF07085 DRTGG domain VB13_RS05115 PF00571 CBS domain VB13_RS05120 PF13302 Acetyltransferase (GNAT) domain VB13_RS05125 PF17573 GA-like domain VB13_RS05125 PF01378 B domain VB13_RS05125 PF00746 LPXTG cell wall anchor motif VB13_RS05125 PF17573 GA-like domain VB13_RS05125 PF00746 LPXTG cell wall anchor motif VB13_RS05125 PF01378 B domain VB13_RS05130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VB13_RS05135 PF00438 S-adenosylmethionine synthetase, N-terminal domain VB13_RS05135 PF02772 S-adenosylmethionine synthetase, central domain VB13_RS05135 PF02773 S-adenosylmethionine synthetase, C-terminal domain VB13_RS05145 PF08279 HTH domain VB13_RS05145 PF03099 Biotin/lipoate A/B protein ligase family VB13_RS05145 PF02237 Biotin protein ligase C terminal domain VB13_RS05155 PF12169 DNA polymerase III subunits gamma and tau domain III VB13_RS05160 PF13185 GAF domain VB13_RS05175 PF00485 Phosphoribulokinase / Uridine kinase family VB13_RS05180 PF00270 DEAD/DEAH box helicase VB13_RS05180 PF00271 Helicase conserved C-terminal domain VB13_RS05185 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain VB13_RS05185 PF01522 Polysaccharide deacetylase VB13_RS05190 PF00171 Aldehyde dehydrogenase family VB13_RS05195 PF05524 PEP-utilising enzyme, N-terminal VB13_RS05195 PF00391 PEP-utilising enzyme, mobile domain VB13_RS05195 PF02896 PEP-utilising enzyme, TIM barrel domain VB13_RS05200 PF00381 PTS HPr component phosphorylation site VB13_RS05205 PF00462 Glutaredoxin VB13_RS05210 PF00317 Ribonucleotide reductase, all-alpha domain VB13_RS05210 PF08343 Ribonucleotide reductase N-terminal VB13_RS05210 PF02867 Ribonucleotide reductase, barrel domain VB13_RS05215 PF00268 Ribonucleotide reductase, small chain VB13_RS05240 PF01381 Helix-turn-helix VB13_RS05245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VB13_RS05245 PF01411 tRNA synthetases class II (A) VB13_RS05245 PF02272 DHHA1 domain VB13_RS05250 PF13145 PPIC-type PPIASE domain VB13_RS05255 PF01596 O-methyltransferase VB13_RS05260 PF07690 Major Facilitator Superfamily VB13_RS05265 PF08439 Oligopeptidase F VB13_RS05265 PF01432 Peptidase family M3 VB13_RS05275 PF01479 S4 domain VB13_RS05275 PF00849 RNA pseudouridylate synthase VB13_RS05280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VB13_RS05285 PF02547 Queuosine biosynthesis protein VB13_RS05310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VB13_RS05310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VB13_RS05320 PF00753 Metallo-beta-lactamase superfamily VB13_RS05320 PF13567 Domain of unknown function (DUF4131) VB13_RS05320 PF03772 Competence protein VB13_RS05325 PF10531 SLBB domain VB13_RS05330 PF01553 Acyltransferase VB13_RS05335 PF05175 Methyltransferase small domain VB13_RS05340 PF01541 GIY-YIG catalytic domain VB13_RS05345 PF02705 K+ potassium transporter VB13_RS05350 PF00270 DEAD/DEAH box helicase VB13_RS05350 PF00271 Helicase conserved C-terminal domain VB13_RS05355 PF16658 Class II release factor RF3, C-terminal domain VB13_RS05355 PF00009 Elongation factor Tu GTP binding domain VB13_RS05355 PF03144 Elongation factor Tu domain 2 VB13_RS05365 PF01225 Mur ligase family, catalytic domain VB13_RS05365 PF02875 Mur ligase family, glutamate ligase domain VB13_RS05365 PF08245 Mur ligase middle domain VB13_RS05370 PF07478 D-ala D-ala ligase C-terminus VB13_RS05370 PF01820 D-ala D-ala ligase N-terminus VB13_RS05375 PF02132 RecR protein VB13_RS05375 PF13662 Toprim domain VB13_RS05380 PF01226 Formate/nitrite transporter VB13_RS05385 PF13808 DDE_Tnp_1-associated VB13_RS05385 PF01609 Transposase DDE domain VB13_RS05395 PF02829 3H domain VB13_RS05395 PF08279 HTH domain VB13_RS05400 PF00300 Histidine phosphatase superfamily (branch 1) VB13_RS05405 PF01180 Dihydroorotate dehydrogenase VB13_RS05415 PF00216 Bacterial DNA-binding protein VB13_RS05425 PF13472 GDSL-like Lipase/Acylhydrolase family VB13_RS05430 PF02645 Uncharacterised protein, DegV family COG1307 VB13_RS05440 PF13476 AAA domain VB13_RS05445 PF01316 Arginine repressor, DNA binding domain VB13_RS05445 PF02863 Arginine repressor, C-terminal domain VB13_RS05450 PF01728 FtsJ-like methyltransferase VB13_RS05450 PF01479 S4 domain VB13_RS05455 PF00348 Polyprenyl synthetase VB13_RS05460 PF02609 Exonuclease VII small subunit VB13_RS05465 PF13742 OB-fold nucleic acid binding domain VB13_RS05465 PF02601 Exonuclease VII, large subunit VB13_RS05470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VB13_RS05470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VB13_RS05475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VB13_RS05475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VB13_RS05475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VB13_RS05475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VB13_RS05480 PF03441 FAD binding domain of DNA photolyase VB13_RS05480 PF00875 DNA photolyase VB13_RS05485 PF00005 ABC transporter VB13_RS05490 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS05495 PF08796 Protein of unknown function (DUF1797) VB13_RS05500 PF17871 AAA lid domain VB13_RS05500 PF00004 ATPase family associated with various cellular activities (AAA) VB13_RS05500 PF07724 AAA domain (Cdc48 subfamily) VB13_RS05500 PF10431 C-terminal, D2-small domain, of ClpB protein VB13_RS05505 PF00293 NUDIX domain VB13_RS05515 PF00133 tRNA synthetases class I (I, L, M and V) VB13_RS05515 PF08264 Anticodon-binding domain of tRNA VB13_RS05520 PF05103 DivIVA protein VB13_RS05525 PF01479 S4 domain VB13_RS05525 PF17774 Putative RNA-binding domain in YlmH VB13_RS05535 PF04472 Cell division protein SepF VB13_RS05540 PF01168 Alanine racemase, N-terminal domain VB13_RS05545 PF12327 FtsZ family, C-terminal domain VB13_RS05545 PF00091 Tubulin/FtsZ family, GTPase domain VB13_RS05550 PF11983 Membrane-attachment and polymerisation-promoting switch VB13_RS05550 PF02491 SHS2 domain inserted in FTSA VB13_RS05555 PF08478 POTRA domain, FtsQ-type VB13_RS05560 PF03033 Glycosyltransferase family 28 N-terminal domain VB13_RS05560 PF04101 Glycosyltransferase family 28 C-terminal domain VB13_RS05565 PF08245 Mur ligase middle domain VB13_RS05565 PF02875 Mur ligase family, glutamate ligase domain VB13_RS05575 PF03144 Elongation factor Tu domain 2 VB13_RS05575 PF00009 Elongation factor Tu GTP binding domain VB13_RS05575 PF14492 Elongation Factor G, domain II VB13_RS05575 PF00679 Elongation factor G C-terminus VB13_RS05580 PF00581 Rhodanese-like domain VB13_RS05585 PF00480 ROK family VB13_RS05595 PF00210 Ferritin-like domain VB13_RS05605 PF04055 Radical SAM superfamily VB13_RS05610 PF06265 Protein of unknown function (DUF1027) VB13_RS05615 PF00356 Bacterial regulatory proteins, lacI family VB13_RS05620 PF05362 Lon protease (S16) C-terminal proteolytic domain VB13_RS05620 PF13180 PDZ domain VB13_RS05625 PF01467 Cytidylyltransferase-like VB13_RS05635 PF03590 Aspartate-ammonia ligase VB13_RS05640 PF00696 Amino acid kinase family VB13_RS05645 PF01546 Peptidase family M20/M25/M40 VB13_RS05650 PF03606 C4-dicarboxylate anaerobic carrier VB13_RS05655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VB13_RS05655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VB13_RS05660 PF13673 Acetyltransferase (GNAT) domain VB13_RS05675 PF01316 Arginine repressor, DNA binding domain VB13_RS05675 PF02863 Arginine repressor, C-terminal domain VB13_RS05690 PF00672 HAMP domain VB13_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS05690 PF06580 Histidine kinase VB13_RS05690 PF02743 Cache domain VB13_RS05695 PF00072 Response regulator receiver domain VB13_RS05695 PF12833 Helix-turn-helix domain VB13_RS05700 PF01641 SelR domain VB13_RS05700 PF01625 Peptide methionine sulfoxide reductase VB13_RS05705 PF08534 Redoxin VB13_RS05710 PF02683 Cytochrome C biogenesis protein transmembrane region VB13_RS05715 PF09827 CRISPR associated protein Cas2 VB13_RS05720 PF01867 CRISPR associated protein Cas1 VB13_RS05750 PF00133 tRNA synthetases class I (I, L, M and V) VB13_RS05750 PF08264 Anticodon-binding domain of tRNA VB13_RS05750 PF10458 Valyl tRNA synthetase tRNA binding arm VB13_RS05780 PF00793 DAHP synthetase I family VB13_RS05780 PF01817 Chorismate mutase type II VB13_RS05785 PF01761 3-dehydroquinate synthase VB13_RS05800 PF13649 Methyltransferase domain VB13_RS05805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VB13_RS05805 PF08501 Shikimate dehydrogenase substrate binding domain VB13_RS05810 PF02837 Glycosyl hydrolases family 2, sugar binding domain VB13_RS05810 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VB13_RS05810 PF00703 Glycosyl hydrolases family 2 VB13_RS05810 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 VB13_RS05810 PF16355 Domain of unknown function (DUF4982) VB13_RS05815 PF12833 Helix-turn-helix domain VB13_RS05815 PF00072 Response regulator receiver domain VB13_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS05820 PF00672 HAMP domain VB13_RS05820 PF02743 Cache domain VB13_RS05820 PF06580 Histidine kinase VB13_RS05830 PF12010 Domain of unknown function (DUF3502) VB13_RS05835 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS05845 PF00480 ROK family VB13_RS05850 PF00232 Glycosyl hydrolase family 1 VB13_RS05855 PF07555 beta-N-acetylglucosaminidase VB13_RS05855 PF02838 Glycosyl hydrolase family 20, domain 2 VB13_RS05860 PF00392 Bacterial regulatory proteins, gntR family VB13_RS05870 PF01074 Glycosyl hydrolases family 38 N-terminal domain VB13_RS05870 PF07748 Glycosyl hydrolases family 38 C-terminal domain VB13_RS05870 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 VB13_RS05870 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain VB13_RS05870 PF09261 Alpha mannosidase middle domain VB13_RS05880 PF01938 TRAM domain VB13_RS05880 PF05958 tRNA (Uracil-5-)-methyltransferase VB13_RS05890 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain VB13_RS05890 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain VB13_RS06020 PF17288 Terminase RNAseH like domain VB13_RS06020 PF04466 Phage terminase large subunit VB13_RS06130 PF00589 Phage integrase family VB13_RS06130 PF02899 Phage integrase, N-terminal SAM-like domain VB13_RS06135 PF02631 RecX family VB13_RS06140 PF04167 Protein of unknown function (DUF402) VB13_RS06205 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus VB13_RS06205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VB13_RS06215 PF00271 Helicase conserved C-terminal domain VB13_RS06215 PF04851 Type III restriction enzyme, res subunit VB13_RS06220 PF09186 Domain of unknown function (DUF1949) VB13_RS06220 PF01205 Uncharacterized protein family UPF0029 VB13_RS06225 PF00291 Pyridoxal-phosphate dependent enzyme VB13_RS06230 PF00575 S1 RNA binding domain VB13_RS06235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VB13_RS06240 PF00072 Response regulator receiver domain VB13_RS06240 PF00196 Bacterial regulatory proteins, luxR family VB13_RS06245 PF00672 HAMP domain VB13_RS06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS06245 PF07730 Histidine kinase VB13_RS06255 PF03793 PASTA domain VB13_RS06255 PF00069 Protein kinase domain VB13_RS06265 PF01189 16S rRNA methyltransferase RsmB/F VB13_RS06265 PF01029 NusB family VB13_RS06270 PF02911 Formyl transferase, C-terminal domain VB13_RS06270 PF00551 Formyl transferase VB13_RS06275 PF00271 Helicase conserved C-terminal domain VB13_RS06275 PF18074 Primosomal protein N C-terminal domain VB13_RS06275 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VB13_RS06275 PF04851 Type III restriction enzyme, res subunit VB13_RS06275 PF17764 3′ DNA-binding domain (3′BD) VB13_RS06280 PF01192 RNA polymerase Rpb6 VB13_RS06285 PF00625 Guanylate kinase VB13_RS06290 PF01966 HD domain VB13_RS06290 PF00013 KH domain VB13_RS06290 PF12072 Domain of unknown function (DUF3552) VB13_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VB13_RS06295 PF03466 LysR substrate binding domain VB13_RS06300 PF02803 Thiolase, C-terminal domain VB13_RS06300 PF00108 Thiolase, N-terminal domain VB13_RS06305 PF01144 Coenzyme A transferase VB13_RS06310 PF01144 Coenzyme A transferase VB13_RS06325 PF02664 S-Ribosylhomocysteinase (LuxS) VB13_RS06330 PF18041 MapZ extracellular domain 1 VB13_RS06330 PF18708 MapZ extracellular C-terminal domain 2 VB13_RS06335 PF02926 THUMP domain VB13_RS06335 PF01170 Putative RNA methylase family UPF0020 VB13_RS06345 PF05103 DivIVA protein VB13_RS06350 PF06908 YspA SLOG family VB13_RS06355 PF03838 Recombination protein U VB13_RS06360 PF00905 Penicillin binding protein transpeptidase domain VB13_RS06360 PF00912 Transglycosylase VB13_RS06365 PF03051 Peptidase C1-like family VB13_RS06370 PF02540 NAD synthase VB13_RS06375 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain VB13_RS06375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VB13_RS06375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VB13_RS06380 PF00324 Amino acid permease VB13_RS06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS06395 PF00005 ABC transporter VB13_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS06405 PF00270 DEAD/DEAH box helicase VB13_RS06405 PF00271 Helicase conserved C-terminal domain VB13_RS06410 PF00953 Glycosyl transferase family 4 VB13_RS06410 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VB13_RS06415 PF03793 PASTA domain VB13_RS06415 PF03717 Penicillin-binding Protein dimerisation domain VB13_RS06415 PF00905 Penicillin binding protein transpeptidase domain VB13_RS06425 PF01795 MraW methylase family VB13_RS06435 PF00171 Aldehyde dehydrogenase family VB13_RS06440 PF00696 Amino acid kinase family VB13_RS06450 PF00005 ABC transporter VB13_RS06460 PF01609 Transposase DDE domain VB13_RS06460 PF13808 DDE_Tnp_1-associated VB13_RS06465 PF00456 Transketolase, thiamine diphosphate binding domain VB13_RS06465 PF02780 Transketolase, C-terminal domain VB13_RS06465 PF02779 Transketolase, pyrimidine binding domain VB13_RS06470 PF00923 Transaldolase/Fructose-6-phosphate aldolase VB13_RS06480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VB13_RS06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS06485 PF00230 Major intrinsic protein VB13_RS06490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VB13_RS06490 PF01266 FAD dependent oxidoreductase VB13_RS06495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VB13_RS06495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VB13_RS06500 PF03413 Peptidase propeptide and YPEB domain VB13_RS06505 PF05979 Bacterial protein of unknown function (DUF896) VB13_RS06510 PF02092 Glycyl-tRNA synthetase beta subunit VB13_RS06515 PF02091 Glycyl-tRNA synthetase alpha subunit VB13_RS06520 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family VB13_RS06525 PF00248 Aldo/keto reductase family VB13_RS06530 PF01979 Amidohydrolase family VB13_RS06535 PF02690 Na+/Pi-cotransporter VB13_RS06545 PF02645 Uncharacterised protein, DegV family COG1307 VB13_RS06550 PF00440 Bacterial regulatory proteins, tetR family VB13_RS06560 PF03458 UPF0126 domain VB13_RS06565 PF01791 DeoC/LacD family aldolase VB13_RS06575 PF02502 Ribose/Galactose Isomerase VB13_RS06580 PF02502 Ribose/Galactose Isomerase VB13_RS06585 PF03611 PTS system sugar-specific permease component VB13_RS06600 PF00455 DeoR C terminal sensor domain VB13_RS06600 PF08220 DeoR-like helix-turn-helix domain VB13_RS06610 PF00403 Heavy-metal-associated domain VB13_RS06615 PF03965 Penicillinase repressor VB13_RS06620 PF07859 alpha/beta hydrolase fold VB13_RS06625 PF02033 Ribosome-binding factor A VB13_RS06630 PF00009 Elongation factor Tu GTP binding domain VB13_RS06630 PF04760 Translation initiation factor IF-2, N-terminal region VB13_RS06630 PF11987 Translation-initiation factor 2 VB13_RS06635 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family VB13_RS06640 PF04296 Protein of unknown function (DUF448) VB13_RS06645 PF13184 NusA-like KH domain VB13_RS06645 PF08529 NusA N-terminal domain VB13_RS06645 PF00575 S1 RNA binding domain VB13_RS06650 PF17384 RimP C-terminal SH3 domain VB13_RS06650 PF02576 RimP N-terminal domain VB13_RS06660 PF02390 Putative methyltransferase VB13_RS06670 PF05975 Bacterial ABC transporter protein EcsB VB13_RS06675 PF00005 ABC transporter VB13_RS06680 PF01230 HIT domain VB13_RS06690 PF03816 Cell envelope-related transcriptional attenuator domain VB13_RS06700 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VB13_RS06705 PF00860 Permease family VB13_RS06715 PF03830 PTS system sorbose subfamily IIB component VB13_RS06715 PF03610 PTS system fructose IIA component VB13_RS06720 PF03609 PTS system sorbose-specific iic component VB13_RS06725 PF03613 PTS system mannose/fructose/sorbose family IID component VB13_RS06735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VB13_RS06735 PF02403 Seryl-tRNA synthetase N-terminal domain VB13_RS06740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VB13_RS06745 PF01039 Carboxyl transferase domain VB13_RS06745 PF17848 Acetyl-coA carboxylase zinc finger domain VB13_RS06750 PF02785 Biotin carboxylase C-terminal domain VB13_RS06750 PF00289 Biotin carboxylase, N-terminal domain VB13_RS06750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VB13_RS06755 PF07977 FabA-like domain VB13_RS06760 PF00364 Biotin-requiring enzyme VB13_RS06765 PF02801 Beta-ketoacyl synthase, C-terminal domain VB13_RS06765 PF00109 Beta-ketoacyl synthase, N-terminal domain VB13_RS06775 PF00698 Acyl transferase domain VB13_RS06780 PF03060 Nitronate monooxygenase VB13_RS06785 PF00550 Phosphopantetheine attachment site VB13_RS06790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VB13_RS06790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VB13_RS06800 PF00378 Enoyl-CoA hydratase/isomerase VB13_RS06805 PF00684 DnaJ central domain VB13_RS06805 PF01556 DnaJ C terminal domain VB13_RS06805 PF00226 DnaJ domain VB13_RS06810 PF00012 Hsp70 protein VB13_RS06815 PF01025 GrpE VB13_RS06820 PF01628 HrcA protein C terminal domain VB13_RS06820 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding VB13_RS06835 PF00300 Histidine phosphatase superfamily (branch 1) VB13_RS06840 PF04226 Transglycosylase associated protein VB13_RS06850 PF02934 GatB/GatE catalytic domain VB13_RS06850 PF02637 GatB domain VB13_RS06855 PF01425 Amidase VB13_RS06860 PF02686 Glu-tRNAGln amidotransferase C subunit VB13_RS06865 PF00391 PEP-utilising enzyme, mobile domain VB13_RS06865 PF02896 PEP-utilising enzyme, TIM barrel domain VB13_RS06865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VB13_RS06870 PF00857 Isochorismatase family VB13_RS06875 PF06018 CodY GAF-like domain VB13_RS06875 PF08222 CodY helix-turn-helix domain VB13_RS06880 PF00155 Aminotransferase class I and II VB13_RS06895 PF17763 Glutaminase/Asparaginase C-terminal domain VB13_RS06895 PF00710 Asparaginase, N-terminal VB13_RS06905 PF00005 ABC transporter VB13_RS06910 PF17191 RecG wedge domain VB13_RS06910 PF00271 Helicase conserved C-terminal domain VB13_RS06910 PF00270 DEAD/DEAH box helicase VB13_RS06915 PF00005 ABC transporter VB13_RS06930 PF00005 ABC transporter VB13_RS06930 PF00664 ABC transporter transmembrane region VB13_RS06935 PF00005 ABC transporter VB13_RS06935 PF00664 ABC transporter transmembrane region VB13_RS06940 PF00005 ABC transporter VB13_RS06945 PF01032 FecCD transport family VB13_RS06950 PF01497 Periplasmic binding protein VB13_RS06965 PF01476 LysM domain VB13_RS06965 PF05257 CHAP domain VB13_RS06970 PF00842 Alanine racemase, C-terminal domain VB13_RS06970 PF01168 Alanine racemase, N-terminal domain VB13_RS06975 PF01648 4'-phosphopantetheinyl transferase superfamily VB13_RS06980 PF02810 SEC-C motif VB13_RS06980 PF07517 SecA DEAD-like domain VB13_RS06980 PF01043 SecA preprotein cross-linking domain VB13_RS06980 PF07516 SecA Wing and Scaffold domain VB13_RS06985 PF01609 Transposase DDE domain VB13_RS06985 PF13808 DDE_Tnp_1-associated VB13_RS06990 PF01238 Phosphomannose isomerase type I VB13_RS06995 PF00480 ROK family VB13_RS07005 PF02378 Phosphotransferase system, EIIC VB13_RS07005 PF00367 phosphotransferase system, EIIB VB13_RS07005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VB13_RS07010 PF00251 Glycosyl hydrolases family 32 N-terminal domain VB13_RS07010 PF08244 Glycosyl hydrolases family 32 C terminal VB13_RS07015 PF00356 Bacterial regulatory proteins, lacI family VB13_RS07020 PF01029 NusB family VB13_RS07025 PF03780 Asp23 family, cell envelope-related function VB13_RS07030 PF09285 Elongation factor P, C-terminal VB13_RS07030 PF08207 Elongation factor P (EF-P) KOW-like domain VB13_RS07030 PF01132 Elongation factor P (EF-P) OB domain VB13_RS07035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VB13_RS07040 PF01321 Creatinase/Prolidase N-terminal domain VB13_RS07040 PF00557 Metallopeptidase family M24 VB13_RS07045 PF00005 ABC transporter VB13_RS07045 PF17760 UvrA interaction domain VB13_RS07045 PF17755 UvrA DNA-binding domain VB13_RS07060 PF01084 Ribosomal protein S18 VB13_RS07065 PF00436 Single-strand binding protein family VB13_RS07070 PF01250 Ribosomal protein S6 VB13_RS07080 PF00730 HhH-GPD superfamily base excision DNA repair protein VB13_RS07080 PF14815 NUDIX domain VB13_RS07085 PF01381 Helix-turn-helix VB13_RS07090 PF00085 Thioredoxin VB13_RS07100 PF00488 MutS domain V VB13_RS07100 PF01713 Smr domain VB13_RS07115 PF01351 Ribonuclease HII VB13_RS07115 PF11858 Domain of unknown function (DUF3378) VB13_RS07120 PF10502 Signal peptidase, peptidase S26 VB13_RS07125 PF13538 UvrD-like helicase C-terminal domain VB13_RS07125 PF14490 Helix-hairpin-helix containing domain VB13_RS07125 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain VB13_RS07135 PF11798 IMS family HHH motif VB13_RS07135 PF11799 impB/mucB/samB family C-terminal domain VB13_RS07135 PF00817 impB/mucB/samB family VB13_RS07140 PF02901 Pyruvate formate lyase-like VB13_RS07140 PF01228 Glycine radical VB13_RS07160 PF00230 Major intrinsic protein VB13_RS07170 PF07690 Major Facilitator Superfamily VB13_RS07175 PF13545 Crp-like helix-turn-helix domain VB13_RS07180 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal VB13_RS07180 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VB13_RS07180 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain VB13_RS07195 PF02575 YbaB/EbfC DNA-binding family VB13_RS07200 PF07739 TipAS antibiotic-recognition domain VB13_RS07200 PF13411 MerR HTH family regulatory protein VB13_RS07205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VB13_RS07205 PF07733 Bacterial DNA polymerase III alpha NTPase domain VB13_RS07205 PF11490 DNA polymerase III polC-type N-terminus II VB13_RS07205 PF02811 PHP domain VB13_RS07205 PF00929 Exonuclease VB13_RS07205 PF01336 OB-fold nucleic acid binding domain VB13_RS07205 PF14579 Helix-hairpin-helix motif VB13_RS07210 PF04394 Protein of unknown function, DUF536 VB13_RS07210 PF08279 HTH domain VB13_RS07215 PF13808 DDE_Tnp_1-associated VB13_RS07215 PF01609 Transposase DDE domain VB13_RS07225 PF01791 DeoC/LacD family aldolase VB13_RS07230 PF07662 Na+ dependent nucleoside transporter C-terminus VB13_RS07230 PF01773 Na+ dependent nucleoside transporter N-terminus VB13_RS07230 PF07670 Nucleoside recognition VB13_RS07235 PF01048 Phosphorylase superfamily VB13_RS07245 PF00253 Ribosomal protein S14p/S29e VB13_RS07250 PF00814 Glycoprotease family VB13_RS07255 PF00583 Acetyltransferase (GNAT) family VB13_RS07260 PF00814 Glycoprotease family VB13_RS07265 PF07288 Protein of unknown function (DUF1447) VB13_RS07270 PF17770 Ribonuclease J C-terminal domain VB13_RS07270 PF00753 Metallo-beta-lactamase superfamily VB13_RS07270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VB13_RS07275 PF03951 Glutamine synthetase, beta-Grasp domain VB13_RS07275 PF00120 Glutamine synthetase, catalytic domain VB13_RS07280 PF13411 MerR HTH family regulatory protein VB13_RS07290 PF00162 Phosphoglycerate kinase VB13_RS07295 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) VB13_RS07305 PF02734 DAK2 domain VB13_RS07305 PF13684 Dihydroxyacetone kinase family VB13_RS07310 PF03780 Asp23 family, cell envelope-related function VB13_RS07315 PF00830 Ribosomal L28 family VB13_RS07320 PF01116 Fructose-bisphosphate aldolase class-II VB13_RS07335 PF06418 CTP synthase N-terminus VB13_RS07335 PF00117 Glutamine amidotransferase class-I VB13_RS07340 PF05066 HB1, ASXL, restriction endonuclease HTH domain VB13_RS07345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VB13_RS07345 PF05698 Bacterial trigger factor protein (TF) C-terminus VB13_RS07345 PF05697 Bacterial trigger factor protein (TF) VB13_RS07350 PF00924 Mechanosensitive ion channel VB13_RS07355 PF04260 Protein of unknown function (DUF436) VB13_RS07360 PF07155 ECF-type riboflavin transporter, S component VB13_RS07365 PF08543 Phosphomethylpyrimidine kinase VB13_RS07370 PF01416 tRNA pseudouridine synthase VB13_RS07410 PF02595 Glycerate kinase family VB13_RS07415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VB13_RS07415 PF18766 SWI2/SNF2 ATPase VB13_RS07415 PF12008 Type I restriction and modification enzyme - subunit R C terminal VB13_RS07425 PF12161 HsdM N-terminal domain VB13_RS07425 PF02384 N-6 DNA Methylase VB13_RS07430 PF00486 Transcriptional regulatory protein, C terminal VB13_RS07430 PF00072 Response regulator receiver domain VB13_RS07440 PF02687 FtsX-like permease family VB13_RS07445 PF00005 ABC transporter VB13_RS07450 PF00664 ABC transporter transmembrane region VB13_RS07450 PF00005 ABC transporter VB13_RS07460 PF04604 Type-A lantibiotic VB13_RS07465 PF00232 Glycosyl hydrolase family 1 VB13_RS07470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS07470 PF02378 Phosphotransferase system, EIIC VB13_RS07475 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VB13_RS07480 PF01791 DeoC/LacD family aldolase VB13_RS07485 PF00294 pfkB family carbohydrate kinase VB13_RS07490 PF02502 Ribose/Galactose Isomerase VB13_RS07495 PF02502 Ribose/Galactose Isomerase VB13_RS07500 PF00455 DeoR C terminal sensor domain VB13_RS07500 PF08220 DeoR-like helix-turn-helix domain VB13_RS07525 PF00380 Ribosomal protein S9/S16 VB13_RS07530 PF00572 Ribosomal protein L13 VB13_RS07535 PF01381 Helix-turn-helix VB13_RS07545 PF02645 Uncharacterised protein, DegV family COG1307 VB13_RS07555 PF08032 RNA 2'-O ribose methyltransferase substrate binding VB13_RS07555 PF00588 SpoU rRNA Methylase family VB13_RS07565 PF00636 Ribonuclease III domain VB13_RS07570 PF01406 tRNA synthetases class I (C) catalytic domain VB13_RS07570 PF09190 DALR domain VB13_RS07580 PF00132 Bacterial transferase hexapeptide (six repeats) VB13_RS07580 PF06426 Serine acetyltransferase, N-terminal VB13_RS07590 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VB13_RS07590 PF00575 S1 RNA binding domain VB13_RS07590 PF00013 KH domain VB13_RS07590 PF03725 3' exoribonuclease family, domain 2 VB13_RS07590 PF01138 3' exoribonuclease family, domain 1 VB13_RS07595 PF00923 Transaldolase/Fructose-6-phosphate aldolase VB13_RS07600 PF03611 PTS system sugar-specific permease component VB13_RS07605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS07610 PF05043 Mga helix-turn-helix domain VB13_RS07610 PF00874 PRD domain VB13_RS07610 PF08279 HTH domain VB13_RS07610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VB13_RS07610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS07615 PF00312 Ribosomal protein S15 VB13_RS07630 PF01327 Polypeptide deformylase VB13_RS07635 PF03358 NADPH-dependent FMN reductase VB13_RS07640 PF01047 MarR family VB13_RS07645 PF14480 DNA polymerase III polC-type N-terminus I VB13_RS07645 PF11490 DNA polymerase III polC-type N-terminus II VB13_RS07645 PF07733 Bacterial DNA polymerase III alpha NTPase domain VB13_RS07645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VB13_RS07645 PF14579 Helix-hairpin-helix motif VB13_RS07645 PF02811 PHP domain VB13_RS07645 PF00929 Exonuclease VB13_RS07650 PF04073 Aminoacyl-tRNA editing domain VB13_RS07650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VB13_RS07650 PF03129 Anticodon binding domain VB13_RS07655 PF13180 PDZ domain VB13_RS07655 PF02163 Peptidase family M50 VB13_RS07665 PF01255 Putative undecaprenyl diphosphate synthase VB13_RS07670 PF02699 Preprotein translocase subunit VB13_RS07680 PF00128 Alpha amylase, catalytic domain VB13_RS07680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VB13_RS07680 PF17999 Pullulanase N1-terminal domain VB13_RS07685 PF00128 Alpha amylase, catalytic domain VB13_RS07690 PF03459 TOBE domain VB13_RS07690 PF00005 ABC transporter VB13_RS07690 PF17912 MalK OB fold domain VB13_RS07695 PF13556 PucR C-terminal helix-turn-helix domain VB13_RS07700 PF02821 Staphylokinase/Streptokinase family VB13_RS07705 PF02580 D-Tyr-tRNA(Tyr) deacylase VB13_RS07710 PF13291 ACT domain VB13_RS07710 PF02824 TGS domain VB13_RS07710 PF04607 Region found in RelA / SpoT proteins VB13_RS07715 PF00746 LPXTG cell wall anchor motif VB13_RS07715 PF04650 YSIRK type signal peptide VB13_RS07720 PF07972 NrdI Flavodoxin like VB13_RS07725 PF03372 Endonuclease/Exonuclease/phosphatase family VB13_RS07730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VB13_RS07730 PF02378 Phosphotransferase system, EIIC VB13_RS07730 PF00367 phosphotransferase system, EIIB VB13_RS07735 PF04452 RNA methyltransferase VB13_RS07770 PF00665 Integrase core domain VB13_RS07770 PF13333 Integrase core domain VB13_RS07770 PF13276 HTH-like domain VB13_RS07795 PF00425 chorismate binding enzyme VB13_RS07795 PF04715 Anthranilate synthase component I, N terminal region VB13_RS07800 PF00117 Glutamine amidotransferase class-I VB13_RS07805 PF05496 Holliday junction DNA helicase RuvB P-loop domain VB13_RS07805 PF16193 AAA C-terminal domain VB13_RS07805 PF12002 MgsA AAA+ ATPase C terminal VB13_RS07840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VB13_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component VB13_RS07855 PF12558 ATP-binding cassette cobalt transporter VB13_RS07855 PF00005 ABC transporter VB13_RS07860 PF00005 ABC transporter VB13_RS07865 PF05532 CsbD-like VB13_RS07875 PF01297 Zinc-uptake complex component A periplasmic VB13_RS07885 PF00082 Subtilase family VB13_RS07885 PF02225 PA domain VB13_RS07885 PF06280 Fn3-like domain VB13_RS07890 PF02370 M protein repeat VB13_RS07890 PF04650 YSIRK type signal peptide VB13_RS07890 PF00746 LPXTG cell wall anchor motif VB13_RS07895 PF00746 LPXTG cell wall anchor motif VB13_RS07895 PF02370 M protein repeat VB13_RS07895 PF04650 YSIRK type signal peptide VB13_RS07900 PF00746 LPXTG cell wall anchor motif VB13_RS07900 PF04650 YSIRK type signal peptide VB13_RS07905 PF08270 M protein trans-acting positive regulator (MGA) PRD domain VB13_RS07905 PF05043 Mga helix-turn-helix domain VB13_RS07905 PF08280 M protein trans-acting positive regulator (MGA) HTH domain VB13_RS07915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VB13_RS07915 PF05257 CHAP domain VB13_RS07920 PF02702 Osmosensitive K+ channel His kinase sensor domain VB13_RS07920 PF00512 His Kinase A (phospho-acceptor) domain VB13_RS07920 PF13493 Domain of unknown function (DUF4118) VB13_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VB13_RS07925 PF00486 Transcriptional regulatory protein, C terminal VB13_RS07925 PF00072 Response regulator receiver domain VB13_RS07930 PF02687 FtsX-like permease family VB13_RS07930 PF12704 MacB-like periplasmic core domain VB13_RS07935 PF00005 ABC transporter VB13_RS07970 PF13145 PPIC-type PPIASE domain VB13_RS07980 PF01640 Peptidase C10 family VB13_RS07980 PF13734 Spi protease inhibitor VB13_RS08000 PF04608 Phosphatidylglycerophosphatase A VB13_RS08005 PF00465 Iron-containing alcohol dehydrogenase VB13_RS08010 PF00923 Transaldolase/Fructose-6-phosphate aldolase VB13_RS08015 PF01228 Glycine radical VB13_RS08015 PF02901 Pyruvate formate lyase-like VB13_RS08020 PF02378 Phosphotransferase system, EIIC VB13_RS08025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VB13_RS08030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VB13_RS08035 PF04198 Putative sugar-binding domain VB13_RS08040 PF08220 DeoR-like helix-turn-helix domain VB13_RS08040 PF00455 DeoR C terminal sensor domain VB13_RS08045 PF04055 Radical SAM superfamily VB13_RS08055 PF00471 Ribosomal protein L33 VB13_RS08060 PF00905 Penicillin binding protein transpeptidase domain VB13_RS08060 PF00912 Transglycosylase VB13_RS08070 PF00849 RNA pseudouridylate synthase VB13_RS08070 PF01479 S4 domain VB13_RS08080 PF03577 Peptidase family C69 VB13_RS08090 PF00118 TCP-1/cpn60 chaperonin family VB13_RS08095 PF00166 Chaperonin 10 Kd subunit VB13_RS08100 PF00004 ATPase family associated with various cellular activities (AAA) VB13_RS08100 PF07724 AAA domain (Cdc48 subfamily) VB13_RS08100 PF17871 AAA lid domain VB13_RS08100 PF02861 Clp amino terminal domain, pathogenicity island component VB13_RS08100 PF10431 C-terminal, D2-small domain, of ClpB protein VB13_RS08105 PF05848 CtsR N-terminal HTH domain VB13_RS08105 PF17727 CtsR C-terminal dimerization domain VB13_RS08110 PF00313 'Cold-shock' DNA-binding domain VB13_RS08120 PF01609 Transposase DDE domain VB13_RS08120 PF13808 DDE_Tnp_1-associated VB13_RS08125 PF00578 AhpC/TSA family VB13_RS08130 PF07992 Pyridine nucleotide-disulphide oxidoreductase VB13_RS08130 PF13192 Thioredoxin domain VB13_RS08135 PF01979 Amidohydrolase family VB13_RS08140 PF01175 Urocanase Rossmann-like domain VB13_RS08140 PF17392 Urocanase C-terminal domain VB13_RS08140 PF17391 Urocanase N-terminal domain VB13_RS08145 PF02971 Formiminotransferase domain VB13_RS08145 PF07837 Formiminotransferase domain, N-terminal subdomain VB13_RS08150 PF04961 Formiminotransferase-cyclodeaminase VB13_RS08155 PF01268 Formate--tetrahydrofolate ligase VB13_RS08165 PF13520 Amino acid permease VB13_RS08170 PF00221 Aromatic amino acid lyase VB13_RS08175 PF00491 Arginase family VB13_RS08185 PF00318 Ribosomal protein S2 VB13_RS08190 PF00889 Elongation factor TS VB13_RS08195 PF05649 Peptidase family M13 VB13_RS08195 PF01431 Peptidase family M13 VB13_RS08200 PF00128 Alpha amylase, catalytic domain VB13_RS08200 PF16657 Maltogenic Amylase, C-terminal domain VB13_RS08205 PF00367 phosphotransferase system, EIIB VB13_RS08205 PF02378 Phosphotransferase system, EIIC VB13_RS08210 PF00392 Bacterial regulatory proteins, gntR family VB13_RS08210 PF07702 UTRA domain VB13_RS08220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VB13_RS08225 PF03883 Peroxide stress protein YaaA VB13_RS08240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VB13_RS08250 PF03477 ATP cone domain VB13_RS08250 PF13597 Anaerobic ribonucleoside-triphosphate reductase VB13_RS08260 PF06949 Protein of unknown function (DUF1292) VB13_RS08265 PF03652 Holliday junction resolvase VB13_RS08270 PF06135 IreB regulatory phosphoprotein VB13_RS08275 PF03960 ArsC family VB13_RS08280 PF00154 recA bacterial DNA recombination protein VB13_RS08285 PF02464 Competence-damaged protein VB13_RS08285 PF18146 Damage-inducible protein CinA KH domain VB13_RS08285 PF00994 Probable molybdopterin binding domain VB13_RS08290 PF13673 Acetyltransferase (GNAT) domain VB13_RS08290 PF13302 Acetyltransferase (GNAT) domain VB13_RS08290 PF03352 Methyladenine glycosylase VB13_RS08290 PF00117 Glutamine amidotransferase class-I VB13_RS08290 PF00958 GMP synthase C terminal domain VB13_RS08295 PF07499 RuvA, C-terminal domain VB13_RS08295 PF01330 RuvA N terminal domain VB13_RS08305 PF08676 MutL C terminal dimerisation domain VB13_RS08305 PF01119 DNA mismatch repair protein, C-terminal domain VB13_RS08310 PF05192 MutS domain III VB13_RS08310 PF05190 MutS family domain IV VB13_RS08310 PF00488 MutS domain V VB13_RS08310 PF05188 MutS domain II VB13_RS08310 PF01624 MutS domain I VB13_RS08320 PF01316 Arginine repressor, DNA binding domain VB13_RS08320 PF02863 Arginine repressor, C-terminal domain VB13_RS08325 PF03485 Arginyl tRNA synthetase N terminal domain VB13_RS08325 PF05746 DALR anticodon binding domain VB13_RS08325 PF00750 tRNA synthetases class I (R) VB13_RS08335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VB13_RS08335 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VB13_RS08340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VB13_RS08340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VB13_RS08345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VB13_RS08345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VB13_RS08350 PF01336 OB-fold nucleic acid binding domain VB13_RS08350 PF00152 tRNA synthetases class II (D, K and N) VB13_RS08350 PF02938 GAD domain VB13_RS08355 PF03129 Anticodon binding domain VB13_RS08355 PF13393 Histidyl-tRNA synthetase VB13_RS08360 PF01783 Ribosomal L32p protein family VB13_RS08365 PF00471 Ribosomal protein L33 VB13_RS08375 PF01022 Bacterial regulatory protein, arsR family VB13_RS08410 PF00293 NUDIX domain VB13_RS08415 PF03551 Transcriptional regulator PadR-like family VB13_RS08440 PF00163 Ribosomal protein S4/S9 N-terminal domain VB13_RS08440 PF01479 S4 domain VB13_RS08450 PF00772 DnaB-like helicase N terminal domain VB13_RS08450 PF03796 DnaB-like helicase C terminal domain VB13_RS08455 PF01281 Ribosomal protein L9, N-terminal domain VB13_RS08455 PF03948 Ribosomal protein L9, C-terminal domain VB13_RS08460 PF01368 DHH family VB13_RS08460 PF02272 DHHA1 domain VB13_RS08465 PF01134 Glucose inhibited division protein A VB13_RS08465 PF13932 GidA associated domain VB13_RS08480 PF01842 ACT domain VB13_RS08480 PF03315 Serine dehydratase beta chain VB13_RS08485 PF03313 Serine dehydratase alpha chain VB13_RS08490 PF06737 Transglycosylase-like domain VB13_RS08495 PF02361 Cobalt transport protein VB13_RS08500 PF00005 ABC transporter VB13_RS08505 PF00005 ABC transporter VB13_RS08510 PF01066 CDP-alcohol phosphatidyltransferase VB13_RS08520 PF00675 Insulinase (Peptidase family M16) VB13_RS08520 PF05193 Peptidase M16 inactive domain VB13_RS08530 PF00535 Glycosyl transferase family 2 VB13_RS08535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VB13_RS08535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VB13_RS08535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VB13_RS08540 PF00483 Nucleotidyl transferase VB13_RS08550 PF02463 RecF/RecN/SMC N terminal domain VB13_RS08555 PF06800 Sugar transport protein VB13_RS08560 PF00478 IMP dehydrogenase / GMP reductase domain VB13_RS08560 PF00571 CBS domain VB13_RS08565 PF00579 tRNA synthetases class I (W and Y) VB13_RS08570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VB13_RS08570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VB13_RS08575 PF12848 ABC transporter VB13_RS08575 PF00005 ABC transporter VB13_RS08595 PF13936 Helix-turn-helix domain VB13_RS08605 PF02590 Predicted SPOUT methyltransferase VB13_RS08610 PF13180 PDZ domain VB13_RS08615 PF17762 HTH domain found in ParB protein VB13_RS08615 PF02195 ParB-like nuclease domain VB13_RS08725 PF00294 pfkB family carbohydrate kinase