AWM59_RS00005	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
AWM59_RS00010	SM00480	DNA polymerase III beta subunit
AWM59_RS00030	SM00487	DEAD-like helicases superfamily
AWM59_RS00030	SM00490	helicase superfamily c-terminal domain
AWM59_RS00030	SM00982	AWM59_RS00030
AWM59_RS00030	SM01058	CarD-like/TRCF domain
AWM59_RS00035	SM00363	S4 RNA-binding domain
AWM59_RS00060	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS00250	SM01400	AWM59_RS00250
AWM59_RS00275	SM01211	AWM59_RS00275
AWM59_RS00295	SM00798	AICARFT/IMPCHase bienzyme
AWM59_RS00295	SM00851	MGS-like domain
AWM59_RS00305	SM01209	AWM59_RS00305
AWM59_RS00305	SM01210	AWM59_RS00305
AWM59_RS00310	SM01001	AIR carboxylase
AWM59_RS00325	SM00998	Adenylosuccinate lyase C-terminus
AWM59_RS00330	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS00335	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS00340	SM00226	Low molecular weight phosphatase family
AWM59_RS00345	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AWM59_RS00360	SM00829	Enoylreductase
AWM59_RS00370	SM01403	AWM59_RS00370
AWM59_RS00390	SM01382	AWM59_RS00390
AWM59_RS00390	SM01383	AWM59_RS00390
AWM59_RS00405	SM00322	K homology RNA-binding domain
AWM59_RS00425	SM01374	AWM59_RS00425
AWM59_RS00430	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AWM59_RS00485	SM00316	Ribosomal protein S1-like RNA-binding domain
AWM59_RS00500	SM00662	RNA polymerases D
AWM59_RS00610	SM00347	helix_turn_helix multiple antibiotic resistance protein
AWM59_RS00615	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS00630	SM00363	S4 RNA-binding domain
AWM59_RS00645	SM00663	RNA polymerase I subunit A N-terminus
AWM59_RS00790	SM00342	helix_turn_helix, arabinose operon control protein
AWM59_RS00825	SM00882	Coenzyme A transferase
AWM59_RS00830	SM00882	Coenzyme A transferase
AWM59_RS00905	SM00788	Adenylosuccinate synthetase
AWM59_RS00915	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AWM59_RS00915	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AWM59_RS00975	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AWM59_RS00985	SM01007	Class II Aldolase and Adducin N-terminal domain
AWM59_RS01000	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01010	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AWM59_RS01010	SM00474	3'-5' exonuclease
AWM59_RS01010	SM00475	5'-3' exonuclease
AWM59_RS01010	SM00482	DNA polymerase A domain
AWM59_RS01015	SM00881	CoA binding domain
AWM59_RS01035	SM00470	ParB-like nuclease domain
AWM59_RS01100	SM00849	Metallo-beta-lactamase superfamily
AWM59_RS01110	SM00460	Transglutaminase/protease-like homologues
AWM59_RS01150	SM00347	helix_turn_helix multiple antibiotic resistance protein
AWM59_RS01155	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01160	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01175	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01180	SM00947	Carbonic anhydrase
AWM59_RS01205	SM00448	cheY-homologous receiver domain
AWM59_RS01205	SM00850	LytTr DNA-binding domain
AWM59_RS01220	SM00393	Putative single-stranded nucleic acids-binding domain
AWM59_RS01220	SM01245	AWM59_RS01220
AWM59_RS01255	SM01130	AWM59_RS01255
AWM59_RS01280	SM00650	Ribosomal RNA adenine dimethylases
AWM59_RS01295	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AWM59_RS01330	SM00838	Elongation factor G C-terminus
AWM59_RS01330	SM00889	Elongation factor G, domain IV
AWM59_RS01335	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AWM59_RS01340	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01345	SM00062	Bacterial periplasmic substrate-binding proteins
AWM59_RS01370	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01400	SM00936	Penicillin-binding protein 5, C-terminal domain 
AWM59_RS01420	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01425	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01535	SM01120	AWM59_RS01535
AWM59_RS01535	SM01121	AWM59_RS01535
AWM59_RS01540	SM00244	prohibitin homologues
AWM59_RS01560	SM00422	helix_turn_helix, mercury resistance
AWM59_RS01565	SM01230	AWM59_RS01565
AWM59_RS01570	SM00849	Metallo-beta-lactamase superfamily
AWM59_RS01600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS01615	SM01133	AWM59_RS01615
AWM59_RS01650	SM00479	AWM59_RS01650
AWM59_RS01655	SM00422	helix_turn_helix, mercury resistance
AWM59_RS01665	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS01670	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS01675	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AWM59_RS01675	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
AWM59_RS01680	SM00419	helix_turn_helix, cAMP Regulatory protein
AWM59_RS01725	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01750	SM00463	Small MutS-related domain
AWM59_RS01750	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AWM59_RS01750	SM00534	ATPase domain of DNA mismatch repair MUTS family
AWM59_RS01755	SM00014	Acid phosphatase homologues
AWM59_RS01770	SM00478	endonuclease III
AWM59_RS01805	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01820	SM00841	Elongation factor P, C-terminal
AWM59_RS01820	SM01185	AWM59_RS01820
AWM59_RS01835	SM00354	helix_turn _helix lactose operon repressor
AWM59_RS01840	SM00640	Glycosyl hydrolases family 32
AWM59_RS01865	SM00957	SecA DEAD-like domain
AWM59_RS01865	SM00958	SecA preprotein cross-linking domain
AWM59_RS01875	SM01005	Alanine racemase, C-terminal domain
AWM59_RS01885	SM00365	Leucine-rich repeat, SDS22-like subfamily
AWM59_RS01885	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AWM59_RS01885	SM00725	NEAr Transporter domain
AWM59_RS01905	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01910	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01915	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01930	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01935	SM00487	DEAD-like helicases superfamily
AWM59_RS01935	SM00490	helicase superfamily c-terminal domain
AWM59_RS01940	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS01950	SM00870	AWM59_RS01950
AWM59_RS01995	SM00845	GatB domain
AWM59_RS02010	SM00855	Phosphoglycerate mutase family
AWM59_RS02020	SM00047	Lysozyme subfamily 2
AWM59_RS02040	SM00271	DnaJ molecular chaperone homology domain
AWM59_RS02050	SM00347	helix_turn_helix multiple antibiotic resistance protein
AWM59_RS02070	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AWM59_RS02075	SM00822	AWM59_RS02075
AWM59_RS02080	SM00825	Beta-ketoacyl synthase
AWM59_RS02095	SM00878	Biotin carboxylase C-terminal domain
AWM59_RS02170	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS02200	SM00322	K homology RNA-binding domain
AWM59_RS02245	SM00420	helix_turn_helix, Deoxyribose operon repressor
AWM59_RS02245	SM01134	AWM59_RS02245
AWM59_RS02280	SM01133	AWM59_RS02280
AWM59_RS02380	SM00861	Transketolase, pyrimidine binding domain
AWM59_RS02390	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS02425	SM00740	AWM59_RS02425
AWM59_RS02435	SM00487	DEAD-like helicases superfamily
AWM59_RS02435	SM00490	helicase superfamily c-terminal domain
AWM59_RS02505	SM00981	AWM59_RS02505
AWM59_RS02530	SM00882	Coenzyme A transferase
AWM59_RS02535	SM00882	Coenzyme A transferase
AWM59_RS02550	SM00322	K homology RNA-binding domain
AWM59_RS02550	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AWM59_RS02555	SM00072	Guanylate kinase homologues.
AWM59_RS02560	SM01409	AWM59_RS02560
AWM59_RS02565	SM00487	DEAD-like helicases superfamily
AWM59_RS02565	SM00490	helicase superfamily c-terminal domain
AWM59_RS02580	SM00331	Sigma factor PP2C-like phosphatases
AWM59_RS02580	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AWM59_RS02585	SM00220	Serine/Threonine protein kinases, catalytic domain
AWM59_RS02585	SM00740	AWM59_RS02585
AWM59_RS02595	SM00387	Histidine kinase-like ATPases
AWM59_RS02600	SM00421	helix_turn_helix, Lux Regulon
AWM59_RS02600	SM00448	cheY-homologous receiver domain
AWM59_RS02610	SM00316	Ribosomal protein S1-like RNA-binding domain
AWM59_RS02625	SM00487	DEAD-like helicases superfamily
AWM59_RS02625	SM00490	helicase superfamily c-terminal domain
AWM59_RS02715	SM00872	Alpha mannosidase, middle domain
AWM59_RS02720	SM01149	AWM59_RS02720
AWM59_RS02725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS02765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AWM59_RS02770	SM00342	helix_turn_helix, arabinose operon control protein
AWM59_RS02770	SM00448	cheY-homologous receiver domain
AWM59_RS02810	SM00342	helix_turn_helix, arabinose operon control protein
AWM59_RS02840	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS02845	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS02885	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS03005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AWM59_RS03005	SM00487	DEAD-like helicases superfamily
AWM59_RS03060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AWM59_RS03060	SM00387	Histidine kinase-like ATPases
AWM59_RS03070	SM00873	B3/4 domain
AWM59_RS03080	SM00419	helix_turn_helix, cAMP Regulatory protein
AWM59_RS03135	SM00354	helix_turn _helix lactose operon repressor
AWM59_RS03170	SM00450	Rhodanese Homology Domain
AWM59_RS03175	SM00838	Elongation factor G C-terminus
AWM59_RS03200	SM00842	Cell division protein FtsA
AWM59_RS03205	SM00864	Tubulin/FtsZ family, GTPase domain
AWM59_RS03205	SM00865	Tubulin/FtsZ family, C-terminal domain
AWM59_RS03225	SM00363	S4 RNA-binding domain
AWM59_RS03250	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS03250	SM01086	C-terminal, D2-small domain, of ClpB protein
AWM59_RS03265	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS03300	SM00363	S4 RNA-binding domain
AWM59_RS03335	SM00411	bacterial (prokaryotic) histone like domain
AWM59_RS03350	SM00855	Phosphoglycerate mutase family
AWM59_RS03375	SM00493	AWM59_RS03375
AWM59_RS03400	SM00487	DEAD-like helicases superfamily
AWM59_RS03400	SM00490	helicase superfamily c-terminal domain
AWM59_RS03420	SM00563	Phosphate acyltransferases
AWM59_RS03425	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AWM59_RS03470	SM00363	S4 RNA-binding domain
AWM59_RS03500	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AWM59_RS03505	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS03575	SM00487	DEAD-like helicases superfamily
AWM59_RS03575	SM00490	helicase superfamily c-terminal domain
AWM59_RS03600	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS03620	SM00364	Leucine-rich repeats, bacterial type
AWM59_RS03620	SM00365	Leucine-rich repeat, SDS22-like subfamily
AWM59_RS03620	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AWM59_RS03645	SM00116	Domain in cystathionine beta-synthase and other proteins.
AWM59_RS03705	SM00347	helix_turn_helix multiple antibiotic resistance protein
AWM59_RS03740	SM00857	Resolvase, N terminal domain
AWM59_RS03820	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AWM59_RS03820	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AWM59_RS03820	SM00493	AWM59_RS03820
AWM59_RS03830	SM00487	DEAD-like helicases superfamily
AWM59_RS03830	SM00490	helicase superfamily c-terminal domain
AWM59_RS03865	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS03870	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS03885	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS03905	SM00857	Resolvase, N terminal domain
AWM59_RS03935	SM00363	S4 RNA-binding domain
AWM59_RS04000	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04005	SM00062	Bacterial periplasmic substrate-binding proteins
AWM59_RS04005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AWM59_RS04010	SM00487	DEAD-like helicases superfamily
AWM59_RS04010	SM00490	helicase superfamily c-terminal domain
AWM59_RS04055	SM00642	Alpha-amylase domain
AWM59_RS04060	SM00632	AWM59_RS04060
AWM59_RS04060	SM00642	Alpha-amylase domain
AWM59_RS04060	SM01065	Starch binding domain
AWM59_RS04080	SM00354	helix_turn _helix lactose operon repressor
AWM59_RS04100	SM00354	helix_turn _helix lactose operon repressor
AWM59_RS04130	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS04180	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS04210	SM00490	helicase superfamily c-terminal domain
AWM59_RS04225	SM00942	Primase C terminal 1 (PriCT-1)
AWM59_RS04225	SM00943	Bifunctional DNA primase/polymerase, N-terminal
AWM59_RS04230	SM00990	AWM59_RS04230
AWM59_RS04425	SM00641	Glycosyl hydrolases family 25
AWM59_RS04435	SM00892	DNA/RNA non-specific endonuclease
AWM59_RS04460	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS04470	SM00481	DNA polymerase alpha chain like domain
AWM59_RS04505	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04510	SM00062	Bacterial periplasmic substrate-binding proteins
AWM59_RS04565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS04575	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04605	SM00904	Riboflavin kinase
AWM59_RS04645	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04650	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04665	SM00448	cheY-homologous receiver domain
AWM59_RS04665	SM00862	Transcriptional regulatory protein, C terminal
AWM59_RS04670	SM00387	Histidine kinase-like ATPases
AWM59_RS04670	SM00388	His Kinase A (phosphoacceptor) domain
AWM59_RS04700	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04755	SM00506	Appr-1"-p processing enzyme
AWM59_RS04775	SM00155	Phospholipase D. Active site motifs.
AWM59_RS04800	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS04820	SM00866	AWM59_RS04820
AWM59_RS04830	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS04830	SM00962	SRP54-type protein, GTPase domain
AWM59_RS04830	SM00963	SRP54-type protein, helical bundle domain
AWM59_RS04835	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS04850	SM00764	Citrate lyase ligase C-terminal domain
AWM59_RS04900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS04900	SM00895	AWM59_RS04900
AWM59_RS04960	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AWM59_RS04960	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AWM59_RS04960	SM00493	AWM59_RS04960
AWM59_RS04990	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AWM59_RS05025	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05030	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05065	SM00937	AWM59_RS05065
AWM59_RS05095	SM01240	AWM59_RS05095
AWM59_RS05105	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05135	SM00954	Region found in RelA / SpoT proteins
AWM59_RS05140	SM01118	AWM59_RS05140
AWM59_RS05145	SM01400	AWM59_RS05145
AWM59_RS05160	SM00881	CoA binding domain
AWM59_RS05200	SM00919	Malic enzyme, NAD binding domain
AWM59_RS05200	SM01274	AWM59_RS05200
AWM59_RS05210	SM00091	PAS domain
AWM59_RS05215	SM00448	cheY-homologous receiver domain
AWM59_RS05235	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05250	SM00905	Dihydroneopterin aldolase
AWM59_RS05275	SM00936	Penicillin-binding protein 5, C-terminal domain 
AWM59_RS05305	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS05320	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05330	SM01260	AWM59_RS05330
AWM59_RS05335	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05345	SM00387	Histidine kinase-like ATPases
AWM59_RS05345	SM00388	His Kinase A (phosphoacceptor) domain
AWM59_RS05350	SM00448	cheY-homologous receiver domain
AWM59_RS05350	SM00862	Transcriptional regulatory protein, C terminal
AWM59_RS05410	SM00465	GIY-YIG type nucleases (URI domain)
AWM59_RS05425	SM00342	helix_turn_helix, arabinose operon control protein
AWM59_RS05425	SM00448	cheY-homologous receiver domain
AWM59_RS05470	SM00838	Elongation factor G C-terminus
AWM59_RS05520	SM00729	Elongator protein 3, MiaB family, Radical SAM
AWM59_RS05580	SM00861	Transketolase, pyrimidine binding domain
AWM59_RS05590	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05605	SM00849	Metallo-beta-lactamase superfamily
AWM59_RS05610	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05630	SM00028	Tetratricopeptide repeats
AWM59_RS05675	SM00478	endonuclease III
AWM59_RS05675	SM00525	AWM59_RS05675
AWM59_RS05730	SM00450	Rhodanese Homology Domain
AWM59_RS05745	SM00316	Ribosomal protein S1-like RNA-binding domain
AWM59_RS05770	SM00434	DNA Topoisomerase IV
AWM59_RS05780	SM01207	AWM59_RS05780
AWM59_RS05790	SM00986	Uracil DNA glycosylase superfamily
AWM59_RS05790	SM00987	UreE urease accessory protein, C-terminal domain 
AWM59_RS05800	SM00062	Bacterial periplasmic substrate-binding proteins
AWM59_RS05815	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AWM59_RS05860	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05860	SM01086	C-terminal, D2-small domain, of ClpB protein
AWM59_RS05875	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05875	SM00994	ClpX C4-type zinc finger
AWM59_RS05875	SM01086	C-terminal, D2-small domain, of ClpB protein
AWM59_RS05920	SM00387	Histidine kinase-like ATPases
AWM59_RS05920	SM00388	His Kinase A (phosphoacceptor) domain
AWM59_RS05925	SM00448	cheY-homologous receiver domain
AWM59_RS05925	SM00862	Transcriptional regulatory protein, C terminal
AWM59_RS05930	SM00954	Region found in RelA / SpoT proteins
AWM59_RS05950	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS05990	SM00047	Lysozyme subfamily 2
AWM59_RS05995	SM00047	Lysozyme subfamily 2
AWM59_RS06010	SM00420	helix_turn_helix, Deoxyribose operon repressor
AWM59_RS06010	SM01134	AWM59_RS06010
AWM59_RS06080	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06090	SM00851	MGS-like domain
AWM59_RS06090	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AWM59_RS06090	SM01209	AWM59_RS06090
AWM59_RS06095	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AWM59_RS06115	SM00363	S4 RNA-binding domain
AWM59_RS06145	SM00854	Bacterial capsule synthesis protein PGA_cap
AWM59_RS06150	SM00981	AWM59_RS06150
AWM59_RS06270	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06305	SM00400	zinc finger
AWM59_RS06305	SM00493	AWM59_RS06305
AWM59_RS06320	SM00062	Bacterial periplasmic substrate-binding proteins
AWM59_RS06320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AWM59_RS06340	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06360	SM00873	B3/4 domain
AWM59_RS06360	SM00874	tRNA synthetase B5 domain
AWM59_RS06360	SM00896	Ferredoxin-fold anticodon binding domain
AWM59_RS06395	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06430	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AWM59_RS06435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AWM59_RS06435	SM00292	breast cancer carboxy-terminal domain
AWM59_RS06435	SM00532	Ligase N family
AWM59_RS06460	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06510	SM01192	AWM59_RS06510
AWM59_RS06510	SM01193	AWM59_RS06510
AWM59_RS06525	SM00387	Histidine kinase-like ATPases
AWM59_RS06525	SM00433	TopoisomeraseII
AWM59_RS06550	SM00830	Chorismate mutase type II
AWM59_RS06575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS06575	SM00866	AWM59_RS06575
AWM59_RS06615	SM00479	AWM59_RS06615
AWM59_RS06615	SM00487	DEAD-like helicases superfamily
AWM59_RS06615	SM00491	AWM59_RS06615
AWM59_RS06625	SM00849	Metallo-beta-lactamase superfamily
AWM59_RS06635	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06640	SM00937	AWM59_RS06640
AWM59_RS06705	SM00354	helix_turn _helix lactose operon repressor
AWM59_RS06710	SM00831	Cation transporter/ATPase, N-terminus
AWM59_RS06720	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AWM59_RS06800	SM00855	Phosphoglycerate mutase family
AWM59_RS06860	SM00731	SprT homologues.
AWM59_RS06865	SM00316	Ribosomal protein S1-like RNA-binding domain
AWM59_RS06865	SM00732	Likely ribonuclease with RNase H fold.
AWM59_RS06895	SM01061	CAT RNA binding domain
AWM59_RS06905	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS06905	SM00962	SRP54-type protein, GTPase domain
AWM59_RS06905	SM00963	SRP54-type protein, helical bundle domain
AWM59_RS06975	SM00984	UDP binding domain
AWM59_RS07020	SM00968	SMC proteins Flexible Hinge Domain
AWM59_RS07025	SM00358	Double-stranded RNA binding motif
AWM59_RS07025	SM00535	Ribonuclease III family
AWM59_RS07030	SM00849	Metallo-beta-lactamase superfamily
AWM59_RS07035	SM00091	PAS domain
AWM59_RS07035	SM00387	Histidine kinase-like ATPases
AWM59_RS07035	SM00388	His Kinase A (phosphoacceptor) domain
AWM59_RS07040	SM00448	cheY-homologous receiver domain
AWM59_RS07040	SM00862	Transcriptional regulatory protein, C terminal
AWM59_RS07075	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS07080	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AWM59_RS07095	SM00354	helix_turn _helix lactose operon repressor
AWM59_RS07145	SM00316	Ribosomal protein S1-like RNA-binding domain
AWM59_RS07145	SM00955	AWM59_RS07145
AWM59_RS07170	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AWM59_RS07170	SM01232	AWM59_RS07170
AWM59_RS07175	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS07260	SM00986	Uracil DNA glycosylase superfamily
AWM59_RS07260	SM00987	UreE urease accessory protein, C-terminal domain 
AWM59_RS07275	SM00257	Lysin motif
AWM59_RS07310	SM00649	Ribosomal protein L11/L12
AWM59_RS07320	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS07320	SM00843	AWM59_RS07320
AWM59_RS07335	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS07345	SM00529	Helix-turn-helix diphteria tox regulatory element
AWM59_RS07345	SM00899	AWM59_RS07345
AWM59_RS07575	SM01131	AWM59_RS07575
AWM59_RS07585	SM01091	Transporter associated domain
AWM59_RS07595	SM00729	Elongator protein 3, MiaB family, Radical SAM
AWM59_RS07600	SM00014	Acid phosphatase homologues
AWM59_RS07615	SM01234	AWM59_RS07615
AWM59_RS07620	SM00363	S4 RNA-binding domain
AWM59_RS07640	SM00116	Domain in cystathionine beta-synthase and other proteins.
AWM59_RS07675	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AWM59_RS07715	SM00487	DEAD-like helicases superfamily
AWM59_RS07715	SM00490	helicase superfamily c-terminal domain
AWM59_RS07740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AWM59_RS07740	SM00387	Histidine kinase-like ATPases
AWM59_RS07740	SM00388	His Kinase A (phosphoacceptor) domain
AWM59_RS07745	SM00448	cheY-homologous receiver domain
AWM59_RS07745	SM00862	Transcriptional regulatory protein, C terminal
AWM59_RS07795	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS07795	SM00930	AWM59_RS07795
AWM59_RS07805	SM00062	Bacterial periplasmic substrate-binding proteins
AWM59_RS07830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AWM59_RS07840	SM01103	AWM59_RS07840
AWM59_RS07895	SM00487	DEAD-like helicases superfamily
AWM59_RS07915	SM00421	helix_turn_helix, Lux Regulon
AWM59_RS07915	SM00448	cheY-homologous receiver domain
AWM59_RS07930	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS07965	SM01133	AWM59_RS07965
AWM59_RS07985	SM00420	helix_turn_helix, Deoxyribose operon repressor
AWM59_RS07985	SM01134	AWM59_RS07985
AWM59_RS08015	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS08035	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AWM59_RS08050	SM00840	AWM59_RS08050
AWM59_RS08070	SM00316	Ribosomal protein S1-like RNA-binding domain
AWM59_RS08070	SM00322	K homology RNA-binding domain
AWM59_RS08095	SM01387	AWM59_RS08095
AWM59_RS08115	SM00347	helix_turn_helix multiple antibiotic resistance protein
AWM59_RS08145	SM01323	AWM59_RS08145
AWM59_RS08155	SM00642	Alpha-amylase domain
AWM59_RS08160	SM00642	Alpha-amylase domain
AWM59_RS08165	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AWM59_RS08185	SM00954	Region found in RelA / SpoT proteins
AWM59_RS08235	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08280	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08285	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AWM59_RS08350	SM00387	Histidine kinase-like ATPases
AWM59_RS08350	SM00388	His Kinase A (phosphoacceptor) domain
AWM59_RS08355	SM00448	cheY-homologous receiver domain
AWM59_RS08355	SM00862	Transcriptional regulatory protein, C terminal
AWM59_RS08365	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08390	SM00327	von Willebrand factor (vWF) type A domain
AWM59_RS08420	SM00892	DNA/RNA non-specific endonuclease
AWM59_RS08465	SM00420	helix_turn_helix, Deoxyribose operon repressor
AWM59_RS08465	SM01134	AWM59_RS08465
AWM59_RS08510	SM00530	Helix-turn-helix XRE-family like proteins 
AWM59_RS08520	SM00883	Chaperonin 10 Kd subunit
AWM59_RS08525	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08525	SM01086	C-terminal, D2-small domain, of ClpB protein
AWM59_RS08535	SM00357	Cold shock protein domain
AWM59_RS08565	SM01221	AWM59_RS08565
AWM59_RS08565	SM01222	AWM59_RS08565
AWM59_RS08600	SM01043	Bacterial transcriptional activator domain
AWM59_RS08620	SM00642	Alpha-amylase domain
AWM59_RS08630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AWM59_RS08630	SM00866	AWM59_RS08630
AWM59_RS08680	SM00732	Likely ribonuclease with RNase H fold.
AWM59_RS08695	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS08700	SM00852	Probable molybdopterin binding domain
AWM59_RS08710	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AWM59_RS08720	SM00853	MutL C terminal dimerisation domain
AWM59_RS08720	SM01340	AWM59_RS08720
AWM59_RS08725	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AWM59_RS08725	SM00534	ATPase domain of DNA mismatch repair MUTS family
AWM59_RS08740	SM00836	DALR anticodon binding domain
AWM59_RS08740	SM01016	Arginyl tRNA synthetase N terminal dom
AWM59_RS08790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AWM59_RS08960	SM00363	S4 RNA-binding domain
AWM59_RS08960	SM01390	AWM59_RS08960
AWM59_RS08985	SM01228	AWM59_RS08985
AWM59_RS09020	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS09025	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS09055	SM00984	UDP binding domain
AWM59_RS09080	SM00116	Domain in cystathionine beta-synthase and other proteins.
AWM59_RS09080	SM01240	AWM59_RS09080
AWM59_RS09095	SM00382	ATPases associated with a variety of cellular activities
AWM59_RS09130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AWM59_RS09135	SM00470	ParB-like nuclease domain
