locus-tag class description SPYM3_RS00005 PF00308 Bacterial dnaA protein SPYM3_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SPYM3_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SPYM3_RS00010 PF02767 DNA polymerase III beta subunit, central domain SPYM3_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SPYM3_RS00020 PF06071 Protein of unknown function (DUF933) SPYM3_RS00020 PF01926 50S ribosome-binding GTPase SPYM3_RS00025 PF01195 Peptidyl-tRNA hydrolase SPYM3_RS00030 PF02559 CarD-like/TRCF domain SPYM3_RS00030 PF03461 TRCF domain SPYM3_RS00030 PF17757 UvrB interaction domain SPYM3_RS00030 PF00271 Helicase conserved C-terminal domain SPYM3_RS00030 PF00270 DEAD/DEAH box helicase SPYM3_RS00035 PF01479 S4 domain SPYM3_RS00050 PF01171 PP-loop family SPYM3_RS00055 PF00156 Phosphoribosyl transferase domain SPYM3_RS00060 PF17862 AAA+ lid domain SPYM3_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) SPYM3_RS00060 PF06480 FtsH Extracellular SPYM3_RS00060 PF01434 Peptidase family M41 SPYM3_RS00065 PF13520 Amino acid permease SPYM3_RS00240 PF05257 CHAP domain SPYM3_RS00240 PF01476 LysM domain SPYM3_RS00245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPYM3_RS00245 PF14572 Phosphoribosyl synthetase-associated domain SPYM3_RS00250 PF02565 Recombination protein O C terminal SPYM3_RS00250 PF11967 Recombination protein O N terminal SPYM3_RS00255 PF02504 Fatty acid synthesis protein SPYM3_RS00260 PF00550 Phosphopantetheine attachment site SPYM3_RS00265 PF01259 SAICAR synthetase SPYM3_RS00270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SPYM3_RS00270 PF02769 AIR synthase related protein, C-terminal domain SPYM3_RS00270 PF00586 AIR synthase related protein, N-terminal domain SPYM3_RS00275 PF13537 Glutamine amidotransferase domain SPYM3_RS00275 PF00156 Phosphoribosyl transferase domain SPYM3_RS00280 PF02769 AIR synthase related protein, C-terminal domain SPYM3_RS00280 PF00586 AIR synthase related protein, N-terminal domain SPYM3_RS00285 PF00551 Formyl transferase SPYM3_RS00290 PF01808 AICARFT/IMPCHase bienzyme SPYM3_RS00290 PF02142 MGS-like domain SPYM3_RS00300 PF02844 Phosphoribosylglycinamide synthetase, N domain SPYM3_RS00300 PF02843 Phosphoribosylglycinamide synthetase, C domain SPYM3_RS00300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SPYM3_RS00305 PF00731 AIR carboxylase SPYM3_RS00310 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SPYM3_RS00310 PF02222 ATP-grasp domain SPYM3_RS00320 PF10397 Adenylosuccinate lyase C-terminus SPYM3_RS00320 PF00206 Lyase SPYM3_RS00330 PF05496 Holliday junction DNA helicase RuvB P-loop domain SPYM3_RS00330 PF05491 RuvB C-terminal winged helix domain SPYM3_RS00330 PF17864 RuvB AAA lid domain SPYM3_RS00335 PF01451 Low molecular weight phosphotyrosine protein phosphatase SPYM3_RS00345 PF01757 Acyltransferase family SPYM3_RS00350 PF00465 Iron-containing alcohol dehydrogenase SPYM3_RS00350 PF00171 Aldehyde dehydrogenase family SPYM3_RS00355 PF00107 Zinc-binding dehydrogenase SPYM3_RS00355 PF08240 Alcohol dehydrogenase GroES-like domain SPYM3_RS00360 PF01554 MatE SPYM3_RS00365 PF00338 Ribosomal protein S10p/S20e SPYM3_RS00370 PF00297 Ribosomal protein L3 SPYM3_RS00375 PF00573 Ribosomal protein L4/L1 family SPYM3_RS00380 PF00276 Ribosomal protein L23 SPYM3_RS00385 PF03947 Ribosomal Proteins L2, C-terminal domain SPYM3_RS00385 PF00181 Ribosomal Proteins L2, RNA binding domain SPYM3_RS00390 PF00203 Ribosomal protein S19 SPYM3_RS00395 PF00237 Ribosomal protein L22p/L17e SPYM3_RS00400 PF07650 KH domain SPYM3_RS00400 PF00189 Ribosomal protein S3, C-terminal domain SPYM3_RS00405 PF00252 Ribosomal protein L16p/L10e SPYM3_RS00410 PF00831 Ribosomal L29 protein SPYM3_RS00415 PF00366 Ribosomal protein S17 SPYM3_RS00420 PF00238 Ribosomal protein L14p/L23e SPYM3_RS00425 PF00467 KOW motif SPYM3_RS00425 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SPYM3_RS00430 PF00673 ribosomal L5P family C-terminus SPYM3_RS00430 PF00281 Ribosomal protein L5 SPYM3_RS00435 PF00253 Ribosomal protein S14p/S29e SPYM3_RS00440 PF00410 Ribosomal protein S8 SPYM3_RS00445 PF00347 Ribosomal protein L6 SPYM3_RS00450 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SPYM3_RS00455 PF00333 Ribosomal protein S5, N-terminal domain SPYM3_RS00455 PF03719 Ribosomal protein S5, C-terminal domain SPYM3_RS00460 PF00327 Ribosomal protein L30p/L7e SPYM3_RS00465 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SPYM3_RS00470 PF00344 SecY translocase SPYM3_RS00480 PF01176 Translation initiation factor 1A / IF-1 SPYM3_RS00485 PF00416 Ribosomal protein S13/S18 SPYM3_RS00490 PF00411 Ribosomal protein S11 SPYM3_RS00495 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SPYM3_RS00495 PF01000 RNA polymerase Rpb3/RpoA insert domain SPYM3_RS00495 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SPYM3_RS00500 PF01196 Ribosomal protein L17 SPYM3_RS00590 PF08544 GHMP kinases C terminal SPYM3_RS00590 PF00288 GHMP kinases N terminal domain SPYM3_RS00595 PF08544 GHMP kinases C terminal SPYM3_RS00595 PF00288 GHMP kinases N terminal domain SPYM3_RS00600 PF01047 MarR family SPYM3_RS00605 PF00005 ABC transporter SPYM3_RS00610 PF00950 ABC 3 transport family SPYM3_RS00620 PF00579 tRNA synthetases class I (W and Y) SPYM3_RS00620 PF01479 S4 domain SPYM3_RS00625 PF00912 Transglycosylase SPYM3_RS00625 PF00905 Penicillin binding protein transpeptidase domain SPYM3_RS00630 PF04560 RNA polymerase Rpb2, domain 7 SPYM3_RS00630 PF04563 RNA polymerase beta subunit SPYM3_RS00630 PF04565 RNA polymerase Rpb2, domain 3 SPYM3_RS00630 PF04561 RNA polymerase Rpb2, domain 2 SPYM3_RS00630 PF10385 RNA polymerase beta subunit external 1 domain SPYM3_RS00630 PF00562 RNA polymerase Rpb2, domain 6 SPYM3_RS00635 PF04998 RNA polymerase Rpb1, domain 5 SPYM3_RS00635 PF00623 RNA polymerase Rpb1, domain 2 SPYM3_RS00635 PF05000 RNA polymerase Rpb1, domain 4 SPYM3_RS00635 PF04997 RNA polymerase Rpb1, domain 1 SPYM3_RS00635 PF04983 RNA polymerase Rpb1, domain 3 SPYM3_RS00645 PF00437 Type II/IV secretion system protein SPYM3_RS00650 PF00482 Type II secretion system (T2SS), protein F SPYM3_RS00655 PF07963 Prokaryotic N-terminal methylation motif SPYM3_RS00685 PF00871 Acetokinase family SPYM3_RS00695 PF14748 Pyrroline-5-carboxylate reductase dimerisation SPYM3_RS00695 PF03807 NADP oxidoreductase coenzyme F420-dependent SPYM3_RS00700 PF05343 M42 glutamyl aminopeptidase SPYM3_RS00710 PF00085 Thioredoxin SPYM3_RS00715 PF14794 Domain of unknown function (DUF4479) SPYM3_RS00715 PF01588 Putative tRNA binding domain SPYM3_RS00720 PF00436 Single-strand binding protein family SPYM3_RS00730 PF01712 Deoxynucleoside kinase SPYM3_RS00735 PF01207 Dihydrouridine synthase (Dus) SPYM3_RS00740 PF01430 Hsp33 protein SPYM3_RS00750 PF08341 Thioester domain SPYM3_RS00750 PF17802 Prealbumin-like fold domain SPYM3_RS00760 PF12892 Spy0128-like isopeptide containing domain SPYM3_RS00765 PF04203 Sortase domain SPYM3_RS00790 PF02667 Short chain fatty acid transporter SPYM3_RS00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYM3_RS00795 PF03466 LysR substrate binding domain SPYM3_RS00800 PF02803 Thiolase, C-terminal domain SPYM3_RS00800 PF00108 Thiolase, N-terminal domain SPYM3_RS00805 PF01144 Coenzyme A transferase SPYM3_RS00810 PF01144 Coenzyme A transferase SPYM3_RS00820 PF01042 Endoribonuclease L-PSP SPYM3_RS00835 PF01496 V-type ATPase 116kDa subunit family SPYM3_RS00840 PF00137 ATP synthase subunit C SPYM3_RS00850 PF01992 ATP synthase (C/AC39) subunit SPYM3_RS00855 PF01990 ATP synthase (F/14-kDa) subunit SPYM3_RS00860 PF16886 ATPsynthase alpha/beta subunit N-term extension SPYM3_RS00860 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYM3_RS00860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYM3_RS00865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYM3_RS00865 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYM3_RS00870 PF01813 ATP synthase subunit D SPYM3_RS00885 PF00709 Adenylosuccinate synthetase SPYM3_RS00890 PF02608 ABC transporter substrate-binding protein PnrA-like SPYM3_RS00895 PF02357 Transcription termination factor nusG SPYM3_RS00895 PF00467 KOW motif SPYM3_RS00910 PF17440 Thiol-activated cytolysin beta sandwich domain SPYM3_RS00910 PF01289 Thiol-activated cytolysin SPYM3_RS00925 PF01053 Cys/Met metabolism PLP-dependent enzyme SPYM3_RS00930 PF08264 Anticodon-binding domain of tRNA SPYM3_RS00930 PF09334 tRNA synthetases class I (M) SPYM3_RS00930 PF00133 tRNA synthetases class I (I, L, M and V) SPYM3_RS00930 PF13603 Leucyl-tRNA synthetase, Domain 2 SPYM3_RS00935 PF03611 PTS system sugar-specific permease component SPYM3_RS00940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS00945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYM3_RS00950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPYM3_RS00955 PF01261 Xylose isomerase-like TIM barrel SPYM3_RS00960 PF00596 Class II Aldolase and Adducin N-terminal domain SPYM3_RS00975 PF00571 CBS domain SPYM3_RS00975 PF00005 ABC transporter SPYM3_RS00980 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS00985 PF01367 5'-3' exonuclease, C-terminal SAM fold SPYM3_RS00985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SPYM3_RS00985 PF00476 DNA polymerase family A SPYM3_RS00995 PF01475 Ferric uptake regulator family SPYM3_RS01005 PF01702 Queuine tRNA-ribosyltransferase SPYM3_RS01010 PF02632 BioY family SPYM3_RS01015 PF12706 Beta-lactamase superfamily domain SPYM3_RS01020 PF14437 MafB19-like deaminase SPYM3_RS01030 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPYM3_RS01030 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYM3_RS01035 PF00342 Phosphoglucose isomerase SPYM3_RS01050 PF01694 Rhomboid family SPYM3_RS01055 PF00483 Nucleotidyl transferase SPYM3_RS01060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SPYM3_RS01060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SPYM3_RS01070 PF00005 ABC transporter SPYM3_RS01070 PF00664 ABC transporter transmembrane region SPYM3_RS01075 PF00664 ABC transporter transmembrane region SPYM3_RS01075 PF00005 ABC transporter SPYM3_RS01080 PF02677 Epoxyqueuosine reductase QueH SPYM3_RS01085 PF00692 dUTPase SPYM3_RS01090 PF18073 Rubredoxin metal binding domain SPYM3_RS01095 PF00484 Carbonic anhydrase SPYM3_RS01100 PF01987 Mitochondrial biogenesis AIM24 SPYM3_RS01105 PF00749 tRNA synthetases class I (E and Q), catalytic domain SPYM3_RS01110 PF17203 Single cache domain 3 SPYM3_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS01110 PF00989 PAS fold SPYM3_RS01110 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SPYM3_RS01125 PF00825 Ribonuclease P SPYM3_RS01130 PF02096 60Kd inner membrane protein SPYM3_RS01135 PF14804 Jag N-terminus SPYM3_RS01135 PF01424 R3H domain SPYM3_RS01140 PF00468 Ribosomal protein L34 SPYM3_RS01145 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SPYM3_RS01160 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS01175 PF00701 Dihydrodipicolinate synthetase family SPYM3_RS01180 PF00480 ROK family SPYM3_RS01190 PF01026 TatD related DNase SPYM3_RS01195 PF13331 Domain of unknown function (DUF4093) SPYM3_RS01200 PF00398 Ribosomal RNA adenine dimethylase SPYM3_RS01205 PF03193 RsgA GTPase SPYM3_RS01205 PF16745 RsgA N-terminal domain SPYM3_RS01210 PF00834 Ribulose-phosphate 3 epimerase family SPYM3_RS01215 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SPYM3_RS01215 PF04263 Thiamin pyrophosphokinase, catalytic domain SPYM3_RS01220 PF02646 RmuC family SPYM3_RS01225 PF01966 HD domain SPYM3_RS01230 PF00156 Phosphoribosyl transferase domain SPYM3_RS01230 PF09182 Bacterial purine repressor, N-terminal SPYM3_RS01240 PF00164 Ribosomal protein S12/S23 SPYM3_RS01245 PF00177 Ribosomal protein S7p/S5e SPYM3_RS01250 PF00009 Elongation factor Tu GTP binding domain SPYM3_RS01250 PF03144 Elongation factor Tu domain 2 SPYM3_RS01250 PF00679 Elongation factor G C-terminus SPYM3_RS01250 PF14492 Elongation Factor G, domain II SPYM3_RS01250 PF03764 Elongation factor G, domain IV SPYM3_RS01255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPYM3_RS01255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SPYM3_RS01260 PF00005 ABC transporter SPYM3_RS01265 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS01275 PF02673 Bacitracin resistance protein BacA SPYM3_RS01280 PF05389 Negative regulator of genetic competence (MecA) SPYM3_RS01285 PF00953 Glycosyl transferase family 4 SPYM3_RS01290 PF00005 ABC transporter SPYM3_RS01295 PF01458 Uncharacterized protein family (UPF0051) SPYM3_RS01300 PF00266 Aminotransferase class-V SPYM3_RS01305 PF01592 NifU-like N terminal domain SPYM3_RS01310 PF01458 Uncharacterized protein family (UPF0051) SPYM3_RS01315 PF00768 D-alanyl-D-alanine carboxypeptidase SPYM3_RS01315 PF07943 Penicillin-binding protein 5, C-terminal domain SPYM3_RS01320 PF00768 D-alanyl-D-alanine carboxypeptidase SPYM3_RS01320 PF07943 Penicillin-binding protein 5, C-terminal domain SPYM3_RS01325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPYM3_RS01330 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS01335 PF12911 N-terminal TM domain of oligopeptide transport permease C SPYM3_RS01335 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS01340 PF00005 ABC transporter SPYM3_RS01340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPYM3_RS01345 PF00005 ABC transporter SPYM3_RS01345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPYM3_RS01405 PF01926 50S ribosome-binding GTPase SPYM3_RS01410 PF01985 CRS1 / YhbY (CRM) domain SPYM3_RS01415 PF01467 Cytidylyltransferase-like SPYM3_RS01420 PF01966 HD domain SPYM3_RS01430 PF13649 Methyltransferase domain SPYM3_RS01435 PF05636 HIGH Nucleotidyl Transferase SPYM3_RS01440 PF01709 Transcriptional regulator SPYM3_RS01445 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYM3_RS01450 PF03180 NLPA lipoprotein SPYM3_RS01455 PF00005 ABC transporter SPYM3_RS01455 PF09383 NIL domain SPYM3_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS01465 PF05525 Branched-chain amino acid transport protein SPYM3_RS01470 PF00375 Sodium:dicarboxylate symporter family SPYM3_RS01475 PF02080 TrkA-C domain SPYM3_RS01475 PF02254 TrkA-N domain SPYM3_RS01480 PF02386 Cation transport protein SPYM3_RS01485 PF02527 rRNA small subunit methyltransferase G SPYM3_RS01490 PF04011 LemA family SPYM3_RS01495 PF01435 Peptidase family M48 SPYM3_RS01505 PF00486 Transcriptional regulatory protein, C terminal SPYM3_RS01505 PF00072 Response regulator receiver domain SPYM3_RS01510 PF00512 His Kinase A (phospho-acceptor) domain SPYM3_RS01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS01510 PF18719 ArlS sensor domain SPYM3_RS01515 PF03477 ATP cone domain SPYM3_RS01525 PF07319 Primosomal protein DnaI N-terminus SPYM3_RS01525 PF01695 IstB-like ATP binding protein SPYM3_RS01530 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SPYM3_RS01530 PF01926 50S ribosome-binding GTPase SPYM3_RS01535 PF12419 SNF2 Helicase protein SPYM3_RS01535 PF00271 Helicase conserved C-terminal domain SPYM3_RS01535 PF00176 SNF2 family N-terminal domain SPYM3_RS01545 PF08245 Mur ligase middle domain SPYM3_RS01545 PF01225 Mur ligase family, catalytic domain SPYM3_RS01545 PF02875 Mur ligase family, glutamate ligase domain SPYM3_RS01555 PF02618 YceG-like family SPYM3_RS01560 PF01272 Transcription elongation factor, GreA/GreB, C-term SPYM3_RS01560 PF03449 Transcription elongation factor, N-terminal SPYM3_RS01565 PF02096 60Kd inner membrane protein SPYM3_RS01570 PF00708 Acylphosphatase SPYM3_RS01575 PF00588 SpoU rRNA Methylase family SPYM3_RS01575 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPYM3_RS01585 PF01027 Inhibitor of apoptosis-promoting Bax1 SPYM3_RS01590 PF03672 Uncharacterised protein family (UPF0154) SPYM3_RS01595 PF01177 Asp/Glu/Hydantoin racemase SPYM3_RS01600 PF01725 Ham1 family SPYM3_RS01620 PF02616 Segregation and condensation protein ScpA SPYM3_RS01625 PF04079 Segregation and condensation complex subunit ScpB SPYM3_RS01630 PF01479 S4 domain SPYM3_RS01630 PF00849 RNA pseudouridylate synthase SPYM3_RS01635 PF01809 Putative membrane protein insertion efficiency factor SPYM3_RS01640 PF00588 SpoU rRNA Methylase family SPYM3_RS01645 PF12822 ECF transporter, substrate-specific component SPYM3_RS01650 PF01569 PAP2 superfamily SPYM3_RS01655 PF16199 Radical_SAM C-terminal domain SPYM3_RS01655 PF04055 Radical SAM superfamily SPYM3_RS01660 PF06962 Putative rRNA methylase SPYM3_RS01665 PF00571 CBS domain SPYM3_RS01665 PF03471 Transporter associated domain SPYM3_RS01665 PF01595 Cyclin M transmembrane N-terminal domain SPYM3_RS01670 PF04055 Radical SAM superfamily SPYM3_RS01675 PF01368 DHH family SPYM3_RS01675 PF02833 DHHA2 domain SPYM3_RS01685 PF01032 FecCD transport family SPYM3_RS01690 PF01032 FecCD transport family SPYM3_RS01695 PF01497 Periplasmic binding protein SPYM3_RS01700 PF00005 ABC transporter SPYM3_RS01705 PF08245 Mur ligase middle domain SPYM3_RS01705 PF02875 Mur ligase family, glutamate ligase domain SPYM3_RS01710 PF14667 Polysaccharide biosynthesis C-terminal domain SPYM3_RS01710 PF01943 Polysaccharide biosynthesis protein SPYM3_RS01720 PF00574 Clp protease SPYM3_RS01725 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SPYM3_RS01730 PF02223 Thymidylate kinase SPYM3_RS01735 PF09115 DNA polymerase III, delta subunit, C terminal SPYM3_RS01750 PF06156 Initiation control protein YabA SPYM3_RS01755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SPYM3_RS01765 PF03932 CutC family SPYM3_RS01770 PF03960 ArsC family SPYM3_RS01775 PF03372 Endonuclease/Exonuclease/phosphatase family SPYM3_RS01785 PF01070 FMN-dependent dehydrogenase SPYM3_RS01790 PF00746 LPXTG cell wall anchor motif SPYM3_RS01790 PF02225 PA domain SPYM3_RS01790 PF00082 Subtilase family SPYM3_RS01790 PF06280 Fn3-like domain SPYM3_RS01800 PF09334 tRNA synthetases class I (M) SPYM3_RS01800 PF01588 Putative tRNA binding domain SPYM3_RS01805 PF00268 Ribonucleotide reductase, small chain SPYM3_RS01810 PF07972 NrdI Flavodoxin like SPYM3_RS01815 PF08343 Ribonucleotide reductase N-terminal SPYM3_RS01815 PF02867 Ribonucleotide reductase, barrel domain SPYM3_RS01815 PF00317 Ribonucleotide reductase, all-alpha domain SPYM3_RS01820 PF03496 ADP-ribosyltransferase exoenzyme SPYM3_RS01850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPYM3_RS01850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPYM3_RS01855 PF07690 Major Facilitator Superfamily SPYM3_RS01860 PF00132 Bacterial transferase hexapeptide (six repeats) SPYM3_RS01860 PF14602 Hexapeptide repeat of succinyl-transferase SPYM3_RS01860 PF12804 MobA-like NTP transferase domain SPYM3_RS01865 PF00293 NUDIX domain SPYM3_RS01875 PF01048 Phosphorylase superfamily SPYM3_RS01890 PF01297 Zinc-uptake complex component A periplasmic SPYM3_RS01895 PF00005 ABC transporter SPYM3_RS01900 PF00950 ABC 3 transport family SPYM3_RS01905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPYM3_RS01910 PF09397 Ftsk gamma domain SPYM3_RS01910 PF17854 FtsK alpha domain SPYM3_RS01910 PF01580 FtsK/SpoIIIE family SPYM3_RS01920 PF03946 Ribosomal protein L11, N-terminal domain SPYM3_RS01920 PF00298 Ribosomal protein L11, RNA binding domain SPYM3_RS01925 PF00687 Ribosomal protein L1p/L10e family SPYM3_RS01930 PF00696 Amino acid kinase family SPYM3_RS01935 PF01765 Ribosome recycling factor SPYM3_RS01945 PF01625 Peptide methionine sulfoxide reductase SPYM3_RS01950 PF06855 YozE SAM-like fold SPYM3_RS01960 PF06100 MCRA family SPYM3_RS01965 PF02562 PhoH-like protein SPYM3_RS01970 PF03167 Uracil DNA glycosylase superfamily SPYM3_RS01975 PF02130 Uncharacterized protein family UPF0054 SPYM3_RS01980 PF01219 Prokaryotic diacylglycerol kinase SPYM3_RS01985 PF01926 50S ribosome-binding GTPase SPYM3_RS01985 PF07650 KH domain SPYM3_RS01990 PF00293 NUDIX domain SPYM3_RS01990 PF13344 Haloacid dehalogenase-like hydrolase SPYM3_RS02050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SPYM3_RS02050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SPYM3_RS02050 PF06827 Zinc finger found in FPG and IleRS SPYM3_RS02055 PF01121 Dephospho-CoA kinase SPYM3_RS02060 PF05872 Bacterial protein of unknown function (DUF853) SPYM3_RS02065 PF07690 Major Facilitator Superfamily SPYM3_RS02065 PF00083 Sugar (and other) transporter SPYM3_RS02075 PF08206 Ribonuclease B OB domain SPYM3_RS02075 PF17876 Cold shock domain SPYM3_RS02075 PF00575 S1 RNA binding domain SPYM3_RS02075 PF00773 RNB domain SPYM3_RS02080 PF01668 SmpB protein SPYM3_RS02090 PF01470 Pyroglutamyl peptidase SPYM3_RS02105 PF00535 Glycosyl transferase family 2 SPYM3_RS02110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPYM3_RS02115 PF00881 Nitroreductase family SPYM3_RS02120 PF01321 Creatinase/Prolidase N-terminal domain SPYM3_RS02120 PF00557 Metallopeptidase family M24 SPYM3_RS02125 PF00356 Bacterial regulatory proteins, lacI family SPYM3_RS02130 PF13439 Glycosyltransferase Family 4 SPYM3_RS02130 PF00534 Glycosyl transferases group 1 SPYM3_RS02135 PF13439 Glycosyltransferase Family 4 SPYM3_RS02135 PF00534 Glycosyl transferases group 1 SPYM3_RS02140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPYM3_RS02140 PF03129 Anticodon binding domain SPYM3_RS02140 PF02824 TGS domain SPYM3_RS02140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPYM3_RS02145 PF00005 ABC transporter SPYM3_RS02165 PF02803 Thiolase, C-terminal domain SPYM3_RS02165 PF00108 Thiolase, N-terminal domain SPYM3_RS02180 PF00072 Response regulator receiver domain SPYM3_RS02180 PF00486 Transcriptional regulatory protein, C terminal SPYM3_RS02185 PF00512 His Kinase A (phospho-acceptor) domain SPYM3_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS02185 PF13426 PAS domain SPYM3_RS02185 PF00672 HAMP domain SPYM3_RS02190 PF00753 Metallo-beta-lactamase superfamily SPYM3_RS02195 PF00035 Double-stranded RNA binding motif SPYM3_RS02195 PF14622 Ribonuclease-III-like SPYM3_RS02200 PF06470 SMC proteins Flexible Hinge Domain SPYM3_RS02200 PF02463 RecF/RecN/SMC N terminal domain SPYM3_RS02210 PF08501 Shikimate dehydrogenase substrate binding domain SPYM3_RS02210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SPYM3_RS02230 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) SPYM3_RS02250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SPYM3_RS02250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPYM3_RS02250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPYM3_RS02310 PF13683 Integrase core domain SPYM3_RS02310 PF01610 Transposase SPYM3_RS02330 PF02881 SRP54-type protein, helical bundle domain SPYM3_RS02330 PF00448 SRP54-type protein, GTPase domain SPYM3_RS02335 PF07690 Major Facilitator Superfamily SPYM3_RS02340 PF03123 CAT RNA binding domain SPYM3_RS02340 PF00874 PRD domain SPYM3_RS02345 PF02378 Phosphotransferase system, EIIC SPYM3_RS02345 PF00367 phosphotransferase system, EIIB SPYM3_RS02345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPYM3_RS02350 PF00232 Glycosyl hydrolase family 1 SPYM3_RS02355 PF09323 Domain of unknown function (DUF1980) SPYM3_RS02360 PF03773 Predicted permease SPYM3_RS02370 PF16921 Tex protein YqgF-like domain SPYM3_RS02370 PF17674 HHH domain SPYM3_RS02370 PF00575 S1 RNA binding domain SPYM3_RS02370 PF09371 Tex-like protein N-terminal domain SPYM3_RS02375 PF10263 SprT-like family SPYM3_RS02385 PF07475 HPr Serine kinase C-terminal domain SPYM3_RS02385 PF02603 HPr Serine kinase N terminus SPYM3_RS02390 PF01790 Prolipoprotein diacylglyceryl transferase SPYM3_RS02400 PF12732 YtxH-like protein SPYM3_RS02415 PF16325 Peptidase family U32 C-terminal domain SPYM3_RS02415 PF01136 Peptidase family U32 SPYM3_RS02420 PF02229 Transcriptional Coactivator p15 (PC4) SPYM3_RS02430 PF00152 tRNA synthetases class II (D, K and N) SPYM3_RS02430 PF01336 OB-fold nucleic acid binding domain SPYM3_RS02450 PF09515 Thiamine transporter protein (Thia_YuaJ) SPYM3_RS02470 PF00255 Glutathione peroxidase SPYM3_RS02475 PF08439 Oligopeptidase F SPYM3_RS02475 PF01432 Peptidase family M3 SPYM3_RS02480 PF00311 Phosphoenolpyruvate carboxylase SPYM3_RS02485 PF01098 Cell cycle protein SPYM3_RS02490 PF03143 Elongation factor Tu C-terminal domain SPYM3_RS02490 PF00009 Elongation factor Tu GTP binding domain SPYM3_RS02490 PF03144 Elongation factor Tu domain 2 SPYM3_RS02495 PF00121 Triosephosphate isomerase SPYM3_RS02520 PF01966 HD domain SPYM3_RS02530 PF00690 Cation transporter/ATPase, N-terminus SPYM3_RS02530 PF00689 Cation transporting ATPase, C-terminus SPYM3_RS02535 PF00356 Bacterial regulatory proteins, lacI family SPYM3_RS02545 PF03613 PTS system mannose/fructose/sorbose family IID component SPYM3_RS02550 PF03609 PTS system sorbose-specific iic component SPYM3_RS02555 PF03830 PTS system sorbose subfamily IIB component SPYM3_RS02560 PF07470 Glycosyl Hydrolase Family 88 SPYM3_RS02585 PF01081 KDPG and KHG aldolase SPYM3_RS02590 PF13419 Haloacid dehalogenase-like hydrolase SPYM3_RS02595 PF08331 Domain of unknown function (DUF1730) SPYM3_RS02600 PF00472 RF-1 domain SPYM3_RS02600 PF03462 PCRF domain SPYM3_RS02605 PF00005 ABC transporter SPYM3_RS02610 PF18075 FtsX extracellular domain SPYM3_RS02610 PF02687 FtsX-like permease family SPYM3_RS02615 PF00753 Metallo-beta-lactamase superfamily SPYM3_RS02625 PF04851 Type III restriction enzyme, res subunit SPYM3_RS02625 PF13307 Helicase C-terminal domain SPYM3_RS02625 PF00929 Exonuclease SPYM3_RS02630 PF00155 Aminotransferase class I and II SPYM3_RS02635 PF00152 tRNA synthetases class II (D, K and N) SPYM3_RS02635 PF01336 OB-fold nucleic acid binding domain SPYM3_RS02640 PF03668 P-loop ATPase protein family SPYM3_RS02645 PF01933 Uncharacterised protein family UPF0052 SPYM3_RS02650 PF14527 WhiA LAGLIDADG-like domain SPYM3_RS02650 PF02650 WhiA C-terminal HTH domain SPYM3_RS02650 PF10298 WhiA N-terminal LAGLIDADG-like domain SPYM3_RS02655 PF03577 Peptidase family C69 SPYM3_RS02660 PF01297 Zinc-uptake complex component A periplasmic SPYM3_RS02660 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SPYM3_RS02665 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS02665 PF07702 UTRA domain SPYM3_RS02670 PF01380 SIS domain SPYM3_RS02675 PF01197 Ribosomal protein L31 SPYM3_RS02680 PF02272 DHHA1 domain SPYM3_RS02680 PF01368 DHH family SPYM3_RS02685 PF00258 Flavodoxin SPYM3_RS02695 PF00654 Voltage gated chloride channel SPYM3_RS02700 PF01245 Ribosomal protein L19 SPYM3_RS02715 PF00204 DNA gyrase B SPYM3_RS02715 PF00986 DNA gyrase B subunit, carboxyl terminus SPYM3_RS02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS02715 PF01751 Toprim domain SPYM3_RS02720 PF06160 Septation ring formation regulator, EzrA SPYM3_RS02730 PF00113 Enolase, C-terminal TIM barrel domain SPYM3_RS02730 PF03952 Enolase, N-terminal domain SPYM3_RS02765 PF00005 ABC transporter SPYM3_RS02785 PF06177 QueT transporter SPYM3_RS02790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SPYM3_RS02790 PF00533 BRCA1 C Terminus (BRCT) domain SPYM3_RS02790 PF01653 NAD-dependent DNA ligase adenylation domain SPYM3_RS02790 PF03120 NAD-dependent DNA ligase OB-fold domain SPYM3_RS02790 PF12826 Helix-hairpin-helix motif SPYM3_RS02795 PF00781 Diacylglycerol kinase catalytic domain SPYM3_RS02800 PF00137 ATP synthase subunit C SPYM3_RS02805 PF00119 ATP synthase A chain SPYM3_RS02810 PF00430 ATP synthase B/B' CF(0) SPYM3_RS02815 PF00213 ATP synthase delta (OSCP) subunit SPYM3_RS02820 PF00306 ATP synthase alpha/beta chain, C terminal domain SPYM3_RS02820 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYM3_RS02820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYM3_RS02825 PF00231 ATP synthase SPYM3_RS02830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPYM3_RS02830 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPYM3_RS02835 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SPYM3_RS02835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SPYM3_RS02845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPYM3_RS02860 PF01409 tRNA synthetases class II core domain (F) SPYM3_RS02860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SPYM3_RS02865 PF01588 Putative tRNA binding domain SPYM3_RS02865 PF03484 tRNA synthetase B5 domain SPYM3_RS02865 PF03483 B3/4 domain SPYM3_RS02865 PF03147 Ferredoxin-fold anticodon binding domain SPYM3_RS02865 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SPYM3_RS02880 PF02687 FtsX-like permease family SPYM3_RS02885 PF00005 ABC transporter SPYM3_RS02895 PF12705 PD-(D/E)XK nuclease superfamily SPYM3_RS02900 PF12705 PD-(D/E)XK nuclease superfamily SPYM3_RS02900 PF13361 UvrD-like helicase C-terminal domain SPYM3_RS02900 PF00580 UvrD/REP helicase N-terminal domain SPYM3_RS02905 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYM3_RS02910 PF01165 Ribosomal protein S21 SPYM3_RS02915 PF01741 Large-conductance mechanosensitive channel, MscL SPYM3_RS02920 PF08275 DNA primase catalytic core, N-terminal domain SPYM3_RS02920 PF01807 CHC2 zinc finger SPYM3_RS02920 PF10410 DnaB-helicase binding domain of primase SPYM3_RS02925 PF04545 Sigma-70, region 4 SPYM3_RS02925 PF00140 Sigma-70 factor, region 1.2 SPYM3_RS02925 PF03979 Sigma-70 factor, region 1.1 SPYM3_RS02925 PF04542 Sigma-70 region 2 SPYM3_RS02925 PF04539 Sigma-70 region 3 SPYM3_RS02930 PF01883 Iron-sulfur cluster assembly protein SPYM3_RS02935 PF04321 RmlD substrate binding domain SPYM3_RS02945 PF02709 N-terminal domain of galactosyltransferase SPYM3_RS02945 PF00535 Glycosyl transferase family 2 SPYM3_RS02955 PF00005 ABC transporter SPYM3_RS02960 PF00535 Glycosyl transferase family 2 SPYM3_RS02975 PF00535 Glycosyl transferase family 2 SPYM3_RS02995 PF01546 Peptidase family M20/M25/M40 SPYM3_RS02995 PF07687 Peptidase dimerisation domain SPYM3_RS03010 PF02224 Cytidylate kinase SPYM3_RS03015 PF05198 Translation initiation factor IF-3, N-terminal domain SPYM3_RS03015 PF00707 Translation initiation factor IF-3, C-terminal domain SPYM3_RS03020 PF01632 Ribosomal protein L35 SPYM3_RS03025 PF00453 Ribosomal protein L20 SPYM3_RS03030 PF00884 Sulfatase SPYM3_RS03035 PF17785 PUA-like domain SPYM3_RS03035 PF10672 S-adenosylmethionine-dependent methyltransferase SPYM3_RS03040 PF01487 Type I 3-dehydroquinase SPYM3_RS03045 PF01264 Chorismate synthase SPYM3_RS03050 PF06133 Control of competence regulator ComK, YlbF/YmcA SPYM3_RS03055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYM3_RS03055 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS03060 PF02875 Mur ligase family, glutamate ligase domain SPYM3_RS03060 PF08245 Mur ligase middle domain SPYM3_RS03070 PF00266 Aminotransferase class-V SPYM3_RS03075 PF02568 Thiamine biosynthesis protein (ThiI) SPYM3_RS03075 PF02926 THUMP domain SPYM3_RS03080 PF09587 Bacterial capsule synthesis protein PGA_cap SPYM3_RS03085 PF00829 Ribosomal prokaryotic L21 protein SPYM3_RS03095 PF01016 Ribosomal L27 protein SPYM3_RS03100 PF03466 LysR substrate binding domain SPYM3_RS03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYM3_RS03105 PF01252 Signal peptidase (SPase) II SPYM3_RS03110 PF01479 S4 domain SPYM3_RS03110 PF00849 RNA pseudouridylate synthase SPYM3_RS03115 PF00156 Phosphoribosyl transferase domain SPYM3_RS03120 PF00860 Permease family SPYM3_RS03125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPYM3_RS03125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPYM3_RS03130 PF00117 Glutamine amidotransferase class-I SPYM3_RS03130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SPYM3_RS03135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPYM3_RS03135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPYM3_RS03135 PF02142 MGS-like domain SPYM3_RS03140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SPYM3_RS03145 PF00005 ABC transporter SPYM3_RS03150 PF02687 FtsX-like permease family SPYM3_RS03150 PF12704 MacB-like periplasmic core domain SPYM3_RS03155 PF03009 Glycerophosphoryl diester phosphodiesterase family SPYM3_RS03160 PF00886 Ribosomal protein S16 SPYM3_RS03190 PF01782 RimM N-terminal domain SPYM3_RS03190 PF05239 PRC-barrel domain SPYM3_RS03195 PF01746 tRNA (Guanine-1)-methyltransferase SPYM3_RS03200 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS03210 PF02558 Ketopantoate reductase PanE/ApbA SPYM3_RS03210 PF08546 Ketopantoate reductase PanE/ApbA C terminal SPYM3_RS03215 PF08220 DeoR-like helix-turn-helix domain SPYM3_RS03215 PF00455 DeoR C terminal sensor domain SPYM3_RS03220 PF00294 pfkB family carbohydrate kinase SPYM3_RS03225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYM3_RS03225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS03230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYM3_RS03230 PF01476 LysM domain SPYM3_RS03235 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYM3_RS03235 PF01476 LysM domain SPYM3_RS03245 PF09028 Mac 1 SPYM3_RS03250 PF00334 Nucleoside diphosphate kinase SPYM3_RS03260 PF02645 Uncharacterised protein, DegV family COG1307 SPYM3_RS03265 PF13735 tRNA nucleotidyltransferase domain 2 putative SPYM3_RS03265 PF12627 Probable RNA and SrmB- binding site of polymerase A SPYM3_RS03265 PF01743 Poly A polymerase head domain SPYM3_RS03270 PF12848 ABC transporter SPYM3_RS03270 PF16326 ABC transporter C-terminal domain SPYM3_RS03270 PF00005 ABC transporter SPYM3_RS03280 PF01327 Polypeptide deformylase SPYM3_RS03285 PF17936 Bacterial Ig domain SPYM3_RS03285 PF00149 Calcineurin-like phosphoesterase SPYM3_RS03285 PF02872 5'-nucleotidase, C-terminal domain SPYM3_RS03290 PF04607 Region found in RelA / SpoT proteins SPYM3_RS03295 PF00486 Transcriptional regulatory protein, C terminal SPYM3_RS03295 PF00072 Response regulator receiver domain SPYM3_RS03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS03300 PF00512 His Kinase A (phospho-acceptor) domain SPYM3_RS03305 PF00288 GHMP kinases N terminal domain SPYM3_RS03305 PF08544 GHMP kinases C terminal SPYM3_RS03305 PF10509 Galactokinase galactose-binding signature SPYM3_RS03315 PF00288 GHMP kinases N terminal domain SPYM3_RS03315 PF08544 GHMP kinases C terminal SPYM3_RS03320 PF01070 FMN-dependent dehydrogenase SPYM3_RS03325 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SPYM3_RS03330 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SPYM3_RS03330 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SPYM3_RS03335 PF00303 Thymidylate synthase SPYM3_RS03340 PF00186 Dihydrofolate reductase SPYM3_RS03350 PF07724 AAA domain (Cdc48 subfamily) SPYM3_RS03350 PF06689 ClpX C4-type zinc finger SPYM3_RS03350 PF10431 C-terminal, D2-small domain, of ClpB protein SPYM3_RS03355 PF01926 50S ribosome-binding GTPase SPYM3_RS03365 PF00004 ATPase family associated with various cellular activities (AAA) SPYM3_RS03365 PF07724 AAA domain (Cdc48 subfamily) SPYM3_RS03365 PF17871 AAA lid domain SPYM3_RS03365 PF10431 C-terminal, D2-small domain, of ClpB protein SPYM3_RS03370 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SPYM3_RS03375 PF01676 Metalloenzyme superfamily SPYM3_RS03380 PF03960 ArsC family SPYM3_RS03385 PF01048 Phosphorylase superfamily SPYM3_RS03390 PF01048 Phosphorylase superfamily SPYM3_RS03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYM3_RS03400 PF03466 LysR substrate binding domain SPYM3_RS03410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPYM3_RS03415 PF00156 Phosphoribosyl transferase domain SPYM3_RS03420 PF01425 Amidase SPYM3_RS03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYM3_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS03435 PF03167 Uracil DNA glycosylase superfamily SPYM3_RS03440 PF01979 Amidohydrolase family SPYM3_RS03445 PF02660 Glycerol-3-phosphate acyltransferase SPYM3_RS03450 PF00986 DNA gyrase B subunit, carboxyl terminus SPYM3_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS03450 PF01751 Toprim domain SPYM3_RS03450 PF00204 DNA gyrase B SPYM3_RS03455 PF00521 DNA gyrase/topoisomerase IV, subunit A SPYM3_RS03455 PF03989 DNA gyrase C-terminal domain, beta-propeller SPYM3_RS03460 PF01063 Amino-transferase class IV SPYM3_RS03480 PF00575 S1 RNA binding domain SPYM3_RS03495 PF00581 Rhodanese-like domain SPYM3_RS03495 PF12368 Rhodanase C-terminal SPYM3_RS03495 PF17773 UPF0176 acylphosphatase like domain SPYM3_RS03515 PF13167 GTP-binding GTPase N-terminal SPYM3_RS03515 PF01926 50S ribosome-binding GTPase SPYM3_RS03515 PF16360 GTP-binding GTPase Middle Region SPYM3_RS03520 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SPYM3_RS03520 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SPYM3_RS03525 PF00753 Metallo-beta-lactamase superfamily SPYM3_RS03525 PF12706 Beta-lactamase superfamily domain SPYM3_RS03530 PF00106 short chain dehydrogenase SPYM3_RS03535 PF17768 RecJ OB domain SPYM3_RS03535 PF01368 DHH family SPYM3_RS03535 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SPYM3_RS03535 PF02272 DHHA1 domain SPYM3_RS03540 PF00156 Phosphoribosyl transferase domain SPYM3_RS03550 PF00730 HhH-GPD superfamily base excision DNA repair protein SPYM3_RS03550 PF00633 Helix-hairpin-helix motif SPYM3_RS03550 PF10576 Iron-sulfur binding domain of endonuclease III SPYM3_RS03555 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SPYM3_RS03560 PF01784 NIF3 (NGG1p interacting factor 3) SPYM3_RS03565 PF01266 FAD dependent oxidoreductase SPYM3_RS03570 PF00483 Nucleotidyl transferase SPYM3_RS03575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SPYM3_RS03580 PF16363 GDP-mannose 4,6 dehydratase SPYM3_RS03585 PF00293 NUDIX domain SPYM3_RS03590 PF01594 AI-2E family transporter SPYM3_RS03600 PF05670 NFACT protein RNA binding domain SPYM3_RS03615 PF00005 ABC transporter SPYM3_RS03620 PF00753 Metallo-beta-lactamase superfamily SPYM3_RS03620 PF17770 Ribonuclease J C-terminal domain SPYM3_RS03620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SPYM3_RS03625 PF00756 Putative esterase SPYM3_RS03635 PF16326 ABC transporter C-terminal domain SPYM3_RS03635 PF00005 ABC transporter SPYM3_RS03635 PF12848 ABC transporter SPYM3_RS03640 PF00676 Dehydrogenase E1 component SPYM3_RS03645 PF02780 Transketolase, C-terminal domain SPYM3_RS03645 PF00364 Biotin-requiring enzyme SPYM3_RS03645 PF02779 Transketolase, pyrimidine binding domain SPYM3_RS03650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SPYM3_RS03650 PF00364 Biotin-requiring enzyme SPYM3_RS03650 PF02817 e3 binding domain SPYM3_RS03660 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS03660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYM3_RS03665 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SPYM3_RS03665 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SPYM3_RS03665 PF02278 Polysaccharide lyase family 8, super-sandwich domain SPYM3_RS03670 PF10437 Bacterial lipoate protein ligase C-terminus SPYM3_RS03670 PF03099 Biotin/lipoate A/B protein ligase family SPYM3_RS03675 PF07685 CobB/CobQ-like glutamine amidotransferase domain SPYM3_RS03680 PF08245 Mur ligase middle domain SPYM3_RS03680 PF08353 Domain of unknown function (DUF1727) SPYM3_RS03685 PF02457 DisA bacterial checkpoint controller nucleotide-binding SPYM3_RS03695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPYM3_RS03695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPYM3_RS03695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPYM3_RS03695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPYM3_RS03705 PF06969 HemN C-terminal domain SPYM3_RS03705 PF04055 Radical SAM superfamily SPYM3_RS03715 PF13344 Haloacid dehalogenase-like hydrolase SPYM3_RS03725 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 SPYM3_RS03725 PF13395 HNH endonuclease SPYM3_RS03725 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 SPYM3_RS03725 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 SPYM3_RS03730 PF01867 CRISPR associated protein Cas1 SPYM3_RS03735 PF09827 CRISPR associated protein Cas2 SPYM3_RS03740 PF09711 CRISPR-associated protein (Cas_Csn2) SPYM3_RS03745 PF00589 Phage integrase family SPYM3_RS03800 PF00772 DnaB-like helicase N terminal domain SPYM3_RS03800 PF03796 DnaB-like helicase C terminal domain SPYM3_RS03810 PF01695 IstB-like ATP binding protein SPYM3_RS03845 PF00436 Single-strand binding protein family SPYM3_RS03870 PF00589 Phage integrase family SPYM3_RS03915 PF00574 Clp protease SPYM3_RS04010 PF13457 GW (Gly-Tryp) dipeptide domain SPYM3_RS04010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYM3_RS04040 PF00334 Nucleoside diphosphate kinase SPYM3_RS04045 PF06421 GTP-binding protein LepA C-terminus SPYM3_RS04045 PF03144 Elongation factor Tu domain 2 SPYM3_RS04045 PF00679 Elongation factor G C-terminus SPYM3_RS04045 PF14492 Elongation Factor G, domain II SPYM3_RS04045 PF00009 Elongation factor Tu GTP binding domain SPYM3_RS04050 PF00746 LPXTG cell wall anchor motif SPYM3_RS04050 PF02370 M protein repeat SPYM3_RS04055 PF01641 SelR domain SPYM3_RS04060 PF03601 Conserved hypothetical protein 698 SPYM3_RS04070 PF03830 PTS system sorbose subfamily IIB component SPYM3_RS04075 PF03609 PTS system sorbose-specific iic component SPYM3_RS04080 PF03613 PTS system mannose/fructose/sorbose family IID component SPYM3_RS04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS04085 PF06580 Histidine kinase SPYM3_RS04090 PF00072 Response regulator receiver domain SPYM3_RS04090 PF12833 Helix-turn-helix domain SPYM3_RS04100 PF00171 Aldehyde dehydrogenase family SPYM3_RS04105 PF02151 UvrB/uvrC motif SPYM3_RS04105 PF08459 UvrC Helix-hairpin-helix N-terminal SPYM3_RS04105 PF01541 GIY-YIG catalytic domain SPYM3_RS04110 PF00881 Nitroreductase family SPYM3_RS04115 PF01546 Peptidase family M20/M25/M40 SPYM3_RS04120 PF10396 GTP-binding protein TrmE N-terminus SPYM3_RS04120 PF12631 MnmE helical domain SPYM3_RS04120 PF01926 50S ribosome-binding GTPase SPYM3_RS04125 PF00466 Ribosomal protein L10 SPYM3_RS04130 PF16320 Ribosomal protein L7/L12 dimerisation domain SPYM3_RS04130 PF00542 Ribosomal protein L7/L12 C-terminal domain SPYM3_RS04135 PF00768 D-alanyl-D-alanine carboxypeptidase SPYM3_RS04135 PF07943 Penicillin-binding protein 5, C-terminal domain SPYM3_RS04145 PF02875 Mur ligase family, glutamate ligase domain SPYM3_RS04145 PF08245 Mur ligase middle domain SPYM3_RS04150 PF01227 GTP cyclohydrolase I SPYM3_RS04155 PF00809 Pterin binding enzyme SPYM3_RS04160 PF02152 Dihydroneopterin aldolase SPYM3_RS04165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SPYM3_RS04170 PF01565 FAD binding domain SPYM3_RS04170 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SPYM3_RS04175 PF00005 ABC transporter SPYM3_RS04175 PF08402 TOBE domain SPYM3_RS04180 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS04190 PF13416 Bacterial extracellular solute-binding protein SPYM3_RS04195 PF00072 Response regulator receiver domain SPYM3_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS04200 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SPYM3_RS04200 PF00989 PAS fold SPYM3_RS04200 PF17203 Single cache domain 3 SPYM3_RS04205 PF03390 2-hydroxycarboxylate transporter family SPYM3_RS04210 PF03949 Malic enzyme, NAD binding domain SPYM3_RS04210 PF00390 Malic enzyme, N-terminal domain SPYM3_RS04215 PF08240 Alcohol dehydrogenase GroES-like domain SPYM3_RS04215 PF13823 Alcohol dehydrogenase GroES-associated SPYM3_RS04215 PF00107 Zinc-binding dehydrogenase SPYM3_RS04220 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SPYM3_RS04225 PF00654 Voltage gated chloride channel SPYM3_RS04235 PF01594 AI-2E family transporter SPYM3_RS04240 PF04002 RadC-like JAB domain SPYM3_RS04245 PF07722 Peptidase C26 SPYM3_RS04250 PF02629 CoA binding domain SPYM3_RS04250 PF06971 Putative DNA-binding protein N-terminus SPYM3_RS04260 PF00266 Aminotransferase class-V SPYM3_RS04265 PF14572 Phosphoribosyl synthetase-associated domain SPYM3_RS04265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPYM3_RS04275 PF04607 Region found in RelA / SpoT proteins SPYM3_RS04280 PF01513 ATP-NAD kinase SPYM3_RS04285 PF00849 RNA pseudouridylate synthase SPYM3_RS04285 PF01479 S4 domain SPYM3_RS04290 PF01515 Phosphate acetyl/butaryl transferase SPYM3_RS04305 PF00571 CBS domain SPYM3_RS04305 PF00005 ABC transporter SPYM3_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS04315 PF00478 IMP dehydrogenase / GMP reductase domain SPYM3_RS04320 PF00156 Phosphoribosyl transferase domain SPYM3_RS04325 PF00860 Permease family SPYM3_RS04330 PF02424 ApbE family SPYM3_RS04335 PF01361 Tautomerase enzyme SPYM3_RS04340 PF00265 Thymidine kinase SPYM3_RS04345 PF03462 PCRF domain SPYM3_RS04345 PF00472 RF-1 domain SPYM3_RS04350 PF05175 Methyltransferase small domain SPYM3_RS04365 PF00464 Serine hydroxymethyltransferase SPYM3_RS04380 PF00005 ABC transporter SPYM3_RS04380 PF00664 ABC transporter transmembrane region SPYM3_RS04385 PF00005 ABC transporter SPYM3_RS04385 PF00664 ABC transporter transmembrane region SPYM3_RS04390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYM3_RS04390 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS04395 PF00056 lactate/malate dehydrogenase, NAD binding domain SPYM3_RS04395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SPYM3_RS04400 PF03989 DNA gyrase C-terminal domain, beta-propeller SPYM3_RS04400 PF00521 DNA gyrase/topoisomerase IV, subunit A SPYM3_RS04405 PF04203 Sortase domain SPYM3_RS04410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPYM3_RS04425 PF03006 Haemolysin-III related SPYM3_RS04435 PF01926 50S ribosome-binding GTPase SPYM3_RS04440 PF01351 Ribonuclease HII SPYM3_RS04445 PF18255 DNA processing protein A sterile alpha motif domain SPYM3_RS04445 PF02481 DNA recombination-mediator protein A SPYM3_RS04450 PF01751 Toprim domain SPYM3_RS04450 PF01131 DNA topoisomerase SPYM3_RS04450 PF01396 Topoisomerase DNA binding C4 zinc finger SPYM3_RS04455 PF01134 Glucose inhibited division protein A SPYM3_RS04460 PF02436 Conserved carboxylase domain SPYM3_RS04460 PF00682 HMGL-like SPYM3_RS04460 PF00364 Biotin-requiring enzyme SPYM3_RS04470 PF00364 Biotin-requiring enzyme SPYM3_RS04475 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SPYM3_RS04480 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SPYM3_RS04490 PF03600 Citrate transporter SPYM3_RS04500 PF00364 Biotin-requiring enzyme SPYM3_RS04505 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SPYM3_RS04515 PF06857 Malonate decarboxylase delta subunit (MdcD) SPYM3_RS04520 PF03328 HpcH/HpaI aldolase/citrate lyase family SPYM3_RS04525 PF04223 Citrate lyase, alpha subunit (CitF) SPYM3_RS04530 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SPYM3_RS04535 PF00364 Biotin-requiring enzyme SPYM3_RS04535 PF02436 Conserved carboxylase domain SPYM3_RS04535 PF00682 HMGL-like SPYM3_RS04540 PF08218 Citrate lyase ligase C-terminal domain SPYM3_RS04550 PF00589 Phage integrase family SPYM3_RS04550 PF13495 Phage integrase, N-terminal SAM-like domain SPYM3_RS04560 PF00448 SRP54-type protein, GTPase domain SPYM3_RS04560 PF02978 Signal peptide binding domain SPYM3_RS04560 PF02881 SRP54-type protein, helical bundle domain SPYM3_RS04565 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SPYM3_RS04570 PF07702 UTRA domain SPYM3_RS04570 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS04580 PF02540 NAD synthase SPYM3_RS04580 PF00117 Glutamine amidotransferase class-I SPYM3_RS04580 PF00958 GMP synthase C terminal domain SPYM3_RS04590 PF00005 ABC transporter SPYM3_RS04590 PF12848 ABC transporter SPYM3_RS04600 PF08543 Phosphomethylpyrimidine kinase SPYM3_RS04600 PF02581 Thiamine monophosphate synthase SPYM3_RS04605 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS04605 PF00155 Aminotransferase class I and II SPYM3_RS04610 PF03477 ATP cone domain SPYM3_RS04610 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPYM3_RS04615 PF13091 PLD-like domain SPYM3_RS04620 PF01268 Formate--tetrahydrofolate ligase SPYM3_RS04625 PF03099 Biotin/lipoate A/B protein ligase family SPYM3_RS04625 PF10437 Bacterial lipoate protein ligase C-terminus SPYM3_RS04635 PF01661 Macro domain SPYM3_RS04640 PF01597 Glycine cleavage H-protein SPYM3_RS04645 PF00296 Luciferase-like monooxygenase SPYM3_RS04650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SPYM3_RS04655 PF03099 Biotin/lipoate A/B protein ligase family SPYM3_RS04660 PF04127 DNA / pantothenate metabolism flavoprotein SPYM3_RS04660 PF02441 Flavoprotein SPYM3_RS04665 PF02441 Flavoprotein SPYM3_RS04670 PF12822 ECF transporter, substrate-specific component SPYM3_RS04675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPYM3_RS04675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPYM3_RS04675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPYM3_RS04675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPYM3_RS04680 PF02653 Branched-chain amino acid transport system / permease component SPYM3_RS04685 PF02653 Branched-chain amino acid transport system / permease component SPYM3_RS04690 PF00005 ABC transporter SPYM3_RS04695 PF02608 ABC transporter substrate-binding protein PnrA-like SPYM3_RS04700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPYM3_RS04705 PF05175 Methyltransferase small domain SPYM3_RS04710 PF00485 Phosphoribulokinase / Uridine kinase family SPYM3_RS04715 PF01649 Ribosomal protein S20 SPYM3_RS04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS04720 PF00512 His Kinase A (phospho-acceptor) domain SPYM3_RS04725 PF00486 Transcriptional regulatory protein, C terminal SPYM3_RS04725 PF00072 Response regulator receiver domain SPYM3_RS04730 PF01433 Peptidase family M1 domain SPYM3_RS04730 PF11838 ERAP1-like C-terminal domain SPYM3_RS04735 PF01895 PhoU domain SPYM3_RS04740 PF00005 ABC transporter SPYM3_RS04745 PF00005 ABC transporter SPYM3_RS04750 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS04755 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS04760 PF12849 PBP superfamily domain SPYM3_RS04765 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SPYM3_RS04765 PF01189 16S rRNA methyltransferase RsmB/F SPYM3_RS04765 PF17126 RsmF rRNA methyltransferase first C-terminal domain SPYM3_RS04770 PF00459 Inositol monophosphatase family SPYM3_RS04775 PF05256 Uncharacterised protein family (UPF0223) SPYM3_RS04780 PF03960 ArsC family SPYM3_RS04785 PF06574 FAD synthetase SPYM3_RS04785 PF01687 Riboflavin kinase SPYM3_RS04790 PF01509 TruB family pseudouridylate synthase (N terminal domain) SPYM3_RS04790 PF16198 tRNA pseudouridylate synthase B C-terminal domain SPYM3_RS04815 PF02687 FtsX-like permease family SPYM3_RS04815 PF12704 MacB-like periplasmic core domain SPYM3_RS04815 PF00005 ABC transporter SPYM3_RS04830 PF03780 Asp23 family, cell envelope-related function SPYM3_RS04835 PF05532 CsbD-like SPYM3_RS04840 PF03780 Asp23 family, cell envelope-related function SPYM3_RS04860 PF13361 UvrD-like helicase C-terminal domain SPYM3_RS04860 PF00580 UvrD/REP helicase N-terminal domain SPYM3_RS04865 PF01235 Sodium:alanine symporter family SPYM3_RS04870 PF01545 Cation efflux family SPYM3_RS04870 PF16916 Dimerisation domain of Zinc Transporter SPYM3_RS04875 PF07373 CAMP factor (Cfa) SPYM3_RS04880 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYM3_RS04885 PF00005 ABC transporter SPYM3_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS04895 PF03831 PhnA domain SPYM3_RS04895 PF08274 PhnA Zinc-Ribbon SPYM3_RS04900 PF01380 SIS domain SPYM3_RS04905 PF10502 Signal peptidase, peptidase S26 SPYM3_RS04910 PF00224 Pyruvate kinase, barrel domain SPYM3_RS04910 PF02887 Pyruvate kinase, alpha/beta domain SPYM3_RS04915 PF00365 Phosphofructokinase SPYM3_RS04920 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPYM3_RS04920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPYM3_RS04920 PF14579 Helix-hairpin-helix motif SPYM3_RS04920 PF01336 OB-fold nucleic acid binding domain SPYM3_RS04920 PF02811 PHP domain SPYM3_RS04925 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS04930 PF00005 ABC transporter SPYM3_RS04950 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYM3_RS04955 PF02661 Fic/DOC family SPYM3_RS04955 PF13784 Fic/DOC family N-terminal SPYM3_RS04960 PF05257 CHAP domain SPYM3_RS04960 PF01520 N-acetylmuramoyl-L-alanine amidase SPYM3_RS04960 PF08460 Bacterial SH3 domain SPYM3_RS05055 PF00574 Clp protease SPYM3_RS05235 PF00343 Carbohydrate phosphorylase SPYM3_RS05240 PF02446 4-alpha-glucanotransferase SPYM3_RS05245 PF00356 Bacterial regulatory proteins, lacI family SPYM3_RS05245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SPYM3_RS05250 PF13416 Bacterial extracellular solute-binding protein SPYM3_RS05255 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS05275 PF07859 alpha/beta hydrolase fold SPYM3_RS05275 PF00934 PE family SPYM3_RS05280 PF04914 DltD protein SPYM3_RS05285 PF00550 Phosphopantetheine attachment site SPYM3_RS05290 PF03062 MBOAT, membrane-bound O-acyltransferase family SPYM3_RS05295 PF13193 AMP-binding enzyme C-terminal domain SPYM3_RS05295 PF00501 AMP-binding enzyme SPYM3_RS05305 PF04851 Type III restriction enzyme, res subunit SPYM3_RS05305 PF02151 UvrB/uvrC motif SPYM3_RS05305 PF12344 Ultra-violet resistance protein B SPYM3_RS05305 PF17757 UvrB interaction domain SPYM3_RS05305 PF00271 Helicase conserved C-terminal domain SPYM3_RS05310 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPYM3_RS05315 PF00005 ABC transporter SPYM3_RS05320 PF02378 Phosphotransferase system, EIIC SPYM3_RS05330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPYM3_RS05335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS05340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYM3_RS05340 PF00874 PRD domain SPYM3_RS05340 PF05043 Mga helix-turn-helix domain SPYM3_RS05340 PF08279 HTH domain SPYM3_RS05350 PF00232 Glycosyl hydrolase family 1 SPYM3_RS05365 PF01926 50S ribosome-binding GTPase SPYM3_RS05365 PF09269 Domain of unknown function (DUF1967) SPYM3_RS05365 PF01018 GTP1/OBG SPYM3_RS05375 PF00665 Integrase core domain SPYM3_RS05375 PF13276 HTH-like domain SPYM3_RS05375 PF13333 Integrase core domain SPYM3_RS05380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SPYM3_RS05380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SPYM3_RS05395 PF13333 Integrase core domain SPYM3_RS05395 PF13276 HTH-like domain SPYM3_RS05395 PF00665 Integrase core domain SPYM3_RS05405 PF01479 S4 domain SPYM3_RS05405 PF00849 RNA pseudouridylate synthase SPYM3_RS05415 PF07690 Major Facilitator Superfamily SPYM3_RS05420 PF08903 Domain of unknown function (DUF1846) SPYM3_RS05435 PF01938 TRAM domain SPYM3_RS05435 PF05958 tRNA (Uracil-5-)-methyltransferase SPYM3_RS05440 PF03816 Cell envelope-related transcriptional attenuator domain SPYM3_RS05445 PF01202 Shikimate kinase SPYM3_RS05450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPYM3_RS05460 PF00557 Metallopeptidase family M24 SPYM3_RS05465 PF07085 DRTGG domain SPYM3_RS05465 PF00571 CBS domain SPYM3_RS05465 PF03061 Thioesterase superfamily SPYM3_RS05465 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS05475 PF00746 LPXTG cell wall anchor motif SPYM3_RS05475 PF01378 B domain SPYM3_RS05475 PF17573 GA-like domain SPYM3_RS05475 PF17573 GA-like domain SPYM3_RS05475 PF01378 B domain SPYM3_RS05475 PF00746 LPXTG cell wall anchor motif SPYM3_RS05480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPYM3_RS05485 PF02773 S-adenosylmethionine synthetase, C-terminal domain SPYM3_RS05485 PF00438 S-adenosylmethionine synthetase, N-terminal domain SPYM3_RS05485 PF02772 S-adenosylmethionine synthetase, central domain SPYM3_RS05495 PF03099 Biotin/lipoate A/B protein ligase family SPYM3_RS05495 PF02237 Biotin protein ligase C terminal domain SPYM3_RS05495 PF08279 HTH domain SPYM3_RS05500 PF12169 DNA polymerase III subunits gamma and tau domain III SPYM3_RS05505 PF13185 GAF domain SPYM3_RS05520 PF00485 Phosphoribulokinase / Uridine kinase family SPYM3_RS05525 PF00270 DEAD/DEAH box helicase SPYM3_RS05525 PF00271 Helicase conserved C-terminal domain SPYM3_RS05530 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SPYM3_RS05530 PF01522 Polysaccharide deacetylase SPYM3_RS05535 PF00171 Aldehyde dehydrogenase family SPYM3_RS05540 PF00391 PEP-utilising enzyme, mobile domain SPYM3_RS05540 PF02896 PEP-utilising enzyme, TIM barrel domain SPYM3_RS05540 PF05524 PEP-utilising enzyme, N-terminal SPYM3_RS05545 PF00381 PTS HPr component phosphorylation site SPYM3_RS05550 PF00462 Glutaredoxin SPYM3_RS05555 PF00317 Ribonucleotide reductase, all-alpha domain SPYM3_RS05555 PF02867 Ribonucleotide reductase, barrel domain SPYM3_RS05555 PF08343 Ribonucleotide reductase N-terminal SPYM3_RS05560 PF00268 Ribonucleotide reductase, small chain SPYM3_RS05575 PF13276 HTH-like domain SPYM3_RS05575 PF13333 Integrase core domain SPYM3_RS05575 PF00665 Integrase core domain SPYM3_RS05580 PF13276 HTH-like domain SPYM3_RS05580 PF00665 Integrase core domain SPYM3_RS05580 PF13333 Integrase core domain SPYM3_RS05595 PF01381 Helix-turn-helix SPYM3_RS05600 PF02272 DHHA1 domain SPYM3_RS05600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPYM3_RS05600 PF01411 tRNA synthetases class II (A) SPYM3_RS05605 PF13145 PPIC-type PPIASE domain SPYM3_RS05610 PF01596 O-methyltransferase SPYM3_RS05615 PF07690 Major Facilitator Superfamily SPYM3_RS05620 PF01432 Peptidase family M3 SPYM3_RS05620 PF08439 Oligopeptidase F SPYM3_RS05630 PF01479 S4 domain SPYM3_RS05630 PF00849 RNA pseudouridylate synthase SPYM3_RS05635 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SPYM3_RS05640 PF02547 Queuosine biosynthesis protein SPYM3_RS05665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SPYM3_RS05665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SPYM3_RS05675 PF03772 Competence protein SPYM3_RS05675 PF00753 Metallo-beta-lactamase superfamily SPYM3_RS05675 PF13567 Domain of unknown function (DUF4131) SPYM3_RS05680 PF10531 SLBB domain SPYM3_RS05685 PF01553 Acyltransferase SPYM3_RS05690 PF17827 PrmC N-terminal domain SPYM3_RS05690 PF05175 Methyltransferase small domain SPYM3_RS05695 PF01541 GIY-YIG catalytic domain SPYM3_RS05700 PF02705 K+ potassium transporter SPYM3_RS05705 PF00270 DEAD/DEAH box helicase SPYM3_RS05705 PF00271 Helicase conserved C-terminal domain SPYM3_RS05710 PF00009 Elongation factor Tu GTP binding domain SPYM3_RS05710 PF16658 Class II release factor RF3, C-terminal domain SPYM3_RS05710 PF03144 Elongation factor Tu domain 2 SPYM3_RS05720 PF02875 Mur ligase family, glutamate ligase domain SPYM3_RS05720 PF01225 Mur ligase family, catalytic domain SPYM3_RS05720 PF08245 Mur ligase middle domain SPYM3_RS05725 PF07478 D-ala D-ala ligase C-terminus SPYM3_RS05725 PF01820 D-ala D-ala ligase N-terminus SPYM3_RS05730 PF13662 Toprim domain SPYM3_RS05730 PF02132 RecR protein SPYM3_RS05735 PF03717 Penicillin-binding Protein dimerisation domain SPYM3_RS05735 PF00905 Penicillin binding protein transpeptidase domain SPYM3_RS05740 PF01226 Formate/nitrite transporter SPYM3_RS05750 PF08279 HTH domain SPYM3_RS05750 PF02829 3H domain SPYM3_RS05755 PF00300 Histidine phosphatase superfamily (branch 1) SPYM3_RS05760 PF01180 Dihydroorotate dehydrogenase SPYM3_RS05790 PF05105 Bacteriophage holin family SPYM3_RS05945 PF14284 PcfJ-like protein SPYM3_RS05965 PF03837 RecT family SPYM3_RS06010 PF01381 Helix-turn-helix SPYM3_RS06020 PF00589 Phage integrase family SPYM3_RS06020 PF14659 Phage integrase, N-terminal SAM-like domain SPYM3_RS06025 PF00216 Bacterial DNA-binding protein SPYM3_RS06035 PF13472 GDSL-like Lipase/Acylhydrolase family SPYM3_RS06040 PF02645 Uncharacterised protein, DegV family COG1307 SPYM3_RS06050 PF13476 AAA domain SPYM3_RS06055 PF02863 Arginine repressor, C-terminal domain SPYM3_RS06055 PF01316 Arginine repressor, DNA binding domain SPYM3_RS06060 PF01728 FtsJ-like methyltransferase SPYM3_RS06060 PF01479 S4 domain SPYM3_RS06065 PF00348 Polyprenyl synthetase SPYM3_RS06070 PF02609 Exonuclease VII small subunit SPYM3_RS06075 PF02601 Exonuclease VII, large subunit SPYM3_RS06075 PF13742 OB-fold nucleic acid binding domain SPYM3_RS06080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SPYM3_RS06080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SPYM3_RS06085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPYM3_RS06085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPYM3_RS06085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPYM3_RS06085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPYM3_RS06090 PF03441 FAD binding domain of DNA photolyase SPYM3_RS06090 PF00875 DNA photolyase SPYM3_RS06095 PF00005 ABC transporter SPYM3_RS06100 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS06105 PF08796 Protein of unknown function (DUF1797) SPYM3_RS06110 PF17871 AAA lid domain SPYM3_RS06110 PF00004 ATPase family associated with various cellular activities (AAA) SPYM3_RS06110 PF10431 C-terminal, D2-small domain, of ClpB protein SPYM3_RS06110 PF07724 AAA domain (Cdc48 subfamily) SPYM3_RS06115 PF00293 NUDIX domain SPYM3_RS06125 PF08264 Anticodon-binding domain of tRNA SPYM3_RS06125 PF00133 tRNA synthetases class I (I, L, M and V) SPYM3_RS06130 PF05103 DivIVA protein SPYM3_RS06135 PF17774 Putative RNA-binding domain in YlmH SPYM3_RS06135 PF01479 S4 domain SPYM3_RS06145 PF04472 Cell division protein SepF SPYM3_RS06150 PF01168 Alanine racemase, N-terminal domain SPYM3_RS06155 PF00091 Tubulin/FtsZ family, GTPase domain SPYM3_RS06155 PF12327 FtsZ family, C-terminal domain SPYM3_RS06160 PF02491 SHS2 domain inserted in FTSA SPYM3_RS06160 PF11983 Membrane-attachment and polymerisation-promoting switch SPYM3_RS06165 PF08478 POTRA domain, FtsQ-type SPYM3_RS06170 PF04101 Glycosyltransferase family 28 C-terminal domain SPYM3_RS06170 PF03033 Glycosyltransferase family 28 N-terminal domain SPYM3_RS06175 PF02875 Mur ligase family, glutamate ligase domain SPYM3_RS06175 PF08245 Mur ligase middle domain SPYM3_RS06185 PF00679 Elongation factor G C-terminus SPYM3_RS06185 PF14492 Elongation Factor G, domain II SPYM3_RS06185 PF00009 Elongation factor Tu GTP binding domain SPYM3_RS06185 PF03144 Elongation factor Tu domain 2 SPYM3_RS06190 PF00581 Rhodanese-like domain SPYM3_RS06195 PF00480 ROK family SPYM3_RS06205 PF00210 Ferritin-like domain SPYM3_RS06215 PF04055 Radical SAM superfamily SPYM3_RS06220 PF06265 Protein of unknown function (DUF1027) SPYM3_RS06225 PF00356 Bacterial regulatory proteins, lacI family SPYM3_RS06230 PF13180 PDZ domain SPYM3_RS06230 PF05362 Lon protease (S16) C-terminal proteolytic domain SPYM3_RS06235 PF01467 Cytidylyltransferase-like SPYM3_RS06245 PF03590 Aspartate-ammonia ligase SPYM3_RS06250 PF00696 Amino acid kinase family SPYM3_RS06255 PF01546 Peptidase family M20/M25/M40 SPYM3_RS06260 PF03606 C4-dicarboxylate anaerobic carrier SPYM3_RS06265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPYM3_RS06265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPYM3_RS06270 PF13673 Acetyltransferase (GNAT) domain SPYM3_RS06285 PF01316 Arginine repressor, DNA binding domain SPYM3_RS06285 PF02863 Arginine repressor, C-terminal domain SPYM3_RS06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS06300 PF00672 HAMP domain SPYM3_RS06300 PF02743 Cache domain SPYM3_RS06300 PF06580 Histidine kinase SPYM3_RS06305 PF00072 Response regulator receiver domain SPYM3_RS06305 PF12833 Helix-turn-helix domain SPYM3_RS06325 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYM3_RS06340 PF01520 N-acetylmuramoyl-L-alanine amidase SPYM3_RS06340 PF05257 CHAP domain SPYM3_RS06340 PF08460 Bacterial SH3 domain SPYM3_RS06485 PF02195 ParB-like nuclease domain SPYM3_RS06525 PF05866 Endodeoxyribonuclease RusA SPYM3_RS06535 PF00436 Single-strand binding protein family SPYM3_RS06560 PF07261 Replication initiation and membrane attachment SPYM3_RS06590 PF10548 P22AR C-terminal domain SPYM3_RS06590 PF08346 AntA/AntB antirepressor SPYM3_RS06600 PF01381 Helix-turn-helix SPYM3_RS06620 PF01625 Peptide methionine sulfoxide reductase SPYM3_RS06620 PF01641 SelR domain SPYM3_RS06625 PF08534 Redoxin SPYM3_RS06630 PF02683 Cytochrome C biogenesis protein transmembrane region SPYM3_RS06640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPYM3_RS06640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPYM3_RS06650 PF10458 Valyl tRNA synthetase tRNA binding arm SPYM3_RS06650 PF00133 tRNA synthetases class I (I, L, M and V) SPYM3_RS06650 PF08264 Anticodon-binding domain of tRNA SPYM3_RS06680 PF01817 Chorismate mutase type II SPYM3_RS06680 PF00793 DAHP synthetase I family SPYM3_RS06685 PF01761 3-dehydroquinate synthase SPYM3_RS06700 PF13649 Methyltransferase domain SPYM3_RS06705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SPYM3_RS06705 PF08501 Shikimate dehydrogenase substrate binding domain SPYM3_RS06710 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 SPYM3_RS06710 PF16355 Domain of unknown function (DUF4982) SPYM3_RS06710 PF00703 Glycosyl hydrolases family 2 SPYM3_RS06710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SPYM3_RS06710 PF02837 Glycosyl hydrolases family 2, sugar binding domain SPYM3_RS06715 PF12833 Helix-turn-helix domain SPYM3_RS06715 PF00072 Response regulator receiver domain SPYM3_RS06720 PF02743 Cache domain SPYM3_RS06720 PF00672 HAMP domain SPYM3_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS06720 PF06580 Histidine kinase SPYM3_RS06730 PF12010 Domain of unknown function (DUF3502) SPYM3_RS06735 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS06740 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS06745 PF00480 ROK family SPYM3_RS06750 PF00232 Glycosyl hydrolase family 1 SPYM3_RS06755 PF02838 Glycosyl hydrolase family 20, domain 2 SPYM3_RS06755 PF07555 beta-N-acetylglucosaminidase SPYM3_RS06760 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS06770 PF07748 Glycosyl hydrolases family 38 C-terminal domain SPYM3_RS06770 PF01074 Glycosyl hydrolases family 38 N-terminal domain SPYM3_RS06770 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SPYM3_RS06770 PF09261 Alpha mannosidase middle domain SPYM3_RS06770 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SPYM3_RS06780 PF01938 TRAM domain SPYM3_RS06780 PF05958 tRNA (Uracil-5-)-methyltransferase SPYM3_RS06790 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPYM3_RS06790 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPYM3_RS07050 PF00589 Phage integrase family SPYM3_RS07050 PF02899 Phage integrase, N-terminal SAM-like domain SPYM3_RS07055 PF02631 RecX family SPYM3_RS07060 PF04167 Protein of unknown function (DUF402) SPYM3_RS07120 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SPYM3_RS07120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SPYM3_RS07135 PF01205 Uncharacterized protein family UPF0029 SPYM3_RS07135 PF09186 Domain of unknown function (DUF1949) SPYM3_RS07140 PF00291 Pyridoxal-phosphate dependent enzyme SPYM3_RS07145 PF00575 S1 RNA binding domain SPYM3_RS07150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPYM3_RS07155 PF00196 Bacterial regulatory proteins, luxR family SPYM3_RS07155 PF00072 Response regulator receiver domain SPYM3_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS07160 PF07730 Histidine kinase SPYM3_RS07160 PF00672 HAMP domain SPYM3_RS07170 PF03793 PASTA domain SPYM3_RS07170 PF00069 Protein kinase domain SPYM3_RS07180 PF01189 16S rRNA methyltransferase RsmB/F SPYM3_RS07180 PF01029 NusB family SPYM3_RS07185 PF02911 Formyl transferase, C-terminal domain SPYM3_RS07185 PF00551 Formyl transferase SPYM3_RS07190 PF17764 3′ DNA-binding domain (3′BD) SPYM3_RS07190 PF00271 Helicase conserved C-terminal domain SPYM3_RS07190 PF04851 Type III restriction enzyme, res subunit SPYM3_RS07190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SPYM3_RS07190 PF18074 Primosomal protein N C-terminal domain SPYM3_RS07195 PF01192 RNA polymerase Rpb6 SPYM3_RS07200 PF00625 Guanylate kinase SPYM3_RS07205 PF00013 KH domain SPYM3_RS07205 PF01966 HD domain SPYM3_RS07205 PF12072 Domain of unknown function (DUF3552) SPYM3_RS07210 PF03466 LysR substrate binding domain SPYM3_RS07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPYM3_RS07215 PF02803 Thiolase, C-terminal domain SPYM3_RS07215 PF00108 Thiolase, N-terminal domain SPYM3_RS07220 PF01144 Coenzyme A transferase SPYM3_RS07225 PF01144 Coenzyme A transferase SPYM3_RS07240 PF02664 S-Ribosylhomocysteinase (LuxS) SPYM3_RS07245 PF18708 MapZ extracellular C-terminal domain 2 SPYM3_RS07245 PF18041 MapZ extracellular domain 1 SPYM3_RS07250 PF01170 Putative RNA methylase family UPF0020 SPYM3_RS07250 PF02926 THUMP domain SPYM3_RS07255 PF05103 DivIVA protein SPYM3_RS07260 PF06908 YspA SLOG family SPYM3_RS07265 PF03838 Recombination protein U SPYM3_RS07270 PF00905 Penicillin binding protein transpeptidase domain SPYM3_RS07270 PF00912 Transglycosylase SPYM3_RS07275 PF03051 Peptidase C1-like family SPYM3_RS07280 PF02540 NAD synthase SPYM3_RS07285 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SPYM3_RS07285 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SPYM3_RS07285 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SPYM3_RS07290 PF00324 Amino acid permease SPYM3_RS07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS07305 PF00005 ABC transporter SPYM3_RS07310 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS07315 PF00270 DEAD/DEAH box helicase SPYM3_RS07315 PF00271 Helicase conserved C-terminal domain SPYM3_RS07320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SPYM3_RS07320 PF00953 Glycosyl transferase family 4 SPYM3_RS07325 PF00905 Penicillin binding protein transpeptidase domain SPYM3_RS07325 PF03717 Penicillin-binding Protein dimerisation domain SPYM3_RS07325 PF03793 PASTA domain SPYM3_RS07335 PF01795 MraW methylase family SPYM3_RS07345 PF00171 Aldehyde dehydrogenase family SPYM3_RS07350 PF00696 Amino acid kinase family SPYM3_RS07490 PF04466 Phage terminase large subunit SPYM3_RS07490 PF17288 Terminase RNAseH like domain SPYM3_RS07600 PF00005 ABC transporter SPYM3_RS07610 PF00456 Transketolase, thiamine diphosphate binding domain SPYM3_RS07610 PF02779 Transketolase, pyrimidine binding domain SPYM3_RS07610 PF02780 Transketolase, C-terminal domain SPYM3_RS07615 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPYM3_RS07625 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS07625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPYM3_RS07630 PF00230 Major intrinsic protein SPYM3_RS07635 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SPYM3_RS07635 PF01266 FAD dependent oxidoreductase SPYM3_RS07640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SPYM3_RS07640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SPYM3_RS07645 PF03413 Peptidase propeptide and YPEB domain SPYM3_RS07650 PF05979 Bacterial protein of unknown function (DUF896) SPYM3_RS07655 PF02092 Glycyl-tRNA synthetase beta subunit SPYM3_RS07660 PF02091 Glycyl-tRNA synthetase alpha subunit SPYM3_RS07665 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SPYM3_RS07670 PF00248 Aldo/keto reductase family SPYM3_RS07675 PF01979 Amidohydrolase family SPYM3_RS07680 PF02690 Na+/Pi-cotransporter SPYM3_RS07690 PF02645 Uncharacterised protein, DegV family COG1307 SPYM3_RS07695 PF00440 Bacterial regulatory proteins, tetR family SPYM3_RS07705 PF03458 UPF0126 domain SPYM3_RS07710 PF01791 DeoC/LacD family aldolase SPYM3_RS07715 PF00294 pfkB family carbohydrate kinase SPYM3_RS07720 PF02502 Ribose/Galactose Isomerase SPYM3_RS07725 PF02502 Ribose/Galactose Isomerase SPYM3_RS07745 PF00455 DeoR C terminal sensor domain SPYM3_RS07745 PF08220 DeoR-like helix-turn-helix domain SPYM3_RS07755 PF00403 Heavy-metal-associated domain SPYM3_RS07760 PF03965 Penicillinase repressor SPYM3_RS07765 PF07859 alpha/beta hydrolase fold SPYM3_RS07770 PF02033 Ribosome-binding factor A SPYM3_RS07775 PF11987 Translation-initiation factor 2 SPYM3_RS07775 PF04760 Translation initiation factor IF-2, N-terminal region SPYM3_RS07775 PF00009 Elongation factor Tu GTP binding domain SPYM3_RS07780 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SPYM3_RS07785 PF04296 Protein of unknown function (DUF448) SPYM3_RS07790 PF08529 NusA N-terminal domain SPYM3_RS07790 PF00575 S1 RNA binding domain SPYM3_RS07790 PF13184 NusA-like KH domain SPYM3_RS07795 PF02576 RimP N-terminal domain SPYM3_RS07795 PF17384 RimP C-terminal SH3 domain SPYM3_RS07805 PF02390 Putative methyltransferase SPYM3_RS07815 PF05975 Bacterial ABC transporter protein EcsB SPYM3_RS07820 PF00005 ABC transporter SPYM3_RS07825 PF01230 HIT domain SPYM3_RS07835 PF03816 Cell envelope-related transcriptional attenuator domain SPYM3_RS07845 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SPYM3_RS07850 PF00860 Permease family SPYM3_RS07860 PF03610 PTS system fructose IIA component SPYM3_RS07860 PF03830 PTS system sorbose subfamily IIB component SPYM3_RS07865 PF03609 PTS system sorbose-specific iic component SPYM3_RS07870 PF03613 PTS system mannose/fructose/sorbose family IID component SPYM3_RS07880 PF13808 DDE_Tnp_1-associated SPYM3_RS07880 PF01609 Transposase DDE domain SPYM3_RS07890 PF02403 Seryl-tRNA synthetase N-terminal domain SPYM3_RS07890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPYM3_RS07895 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SPYM3_RS07900 PF01039 Carboxyl transferase domain SPYM3_RS07900 PF17848 Acetyl-coA carboxylase zinc finger domain SPYM3_RS07905 PF02785 Biotin carboxylase C-terminal domain SPYM3_RS07905 PF00289 Biotin carboxylase, N-terminal domain SPYM3_RS07905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPYM3_RS07910 PF07977 FabA-like domain SPYM3_RS07915 PF00364 Biotin-requiring enzyme SPYM3_RS07920 PF02801 Beta-ketoacyl synthase, C-terminal domain SPYM3_RS07920 PF00109 Beta-ketoacyl synthase, N-terminal domain SPYM3_RS07930 PF00698 Acyl transferase domain SPYM3_RS07935 PF03060 Nitronate monooxygenase SPYM3_RS07940 PF00550 Phosphopantetheine attachment site SPYM3_RS07945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SPYM3_RS07945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SPYM3_RS07955 PF00378 Enoyl-CoA hydratase/isomerase SPYM3_RS07960 PF00684 DnaJ central domain SPYM3_RS07960 PF01556 DnaJ C terminal domain SPYM3_RS07960 PF00226 DnaJ domain SPYM3_RS07965 PF00012 Hsp70 protein SPYM3_RS07970 PF01025 GrpE SPYM3_RS07975 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SPYM3_RS07975 PF01628 HrcA protein C terminal domain SPYM3_RS07990 PF00300 Histidine phosphatase superfamily (branch 1) SPYM3_RS07995 PF04226 Transglycosylase associated protein SPYM3_RS08005 PF02637 GatB domain SPYM3_RS08005 PF02934 GatB/GatE catalytic domain SPYM3_RS08010 PF01425 Amidase SPYM3_RS08015 PF02686 Glu-tRNAGln amidotransferase C subunit SPYM3_RS08025 PF00857 Isochorismatase family SPYM3_RS08030 PF06018 CodY GAF-like domain SPYM3_RS08030 PF08222 CodY helix-turn-helix domain SPYM3_RS08035 PF00155 Aminotransferase class I and II SPYM3_RS08050 PF00710 Asparaginase, N-terminal SPYM3_RS08050 PF17763 Glutaminase/Asparaginase C-terminal domain SPYM3_RS08060 PF00005 ABC transporter SPYM3_RS08065 PF17191 RecG wedge domain SPYM3_RS08065 PF00270 DEAD/DEAH box helicase SPYM3_RS08065 PF00271 Helicase conserved C-terminal domain SPYM3_RS08070 PF00005 ABC transporter SPYM3_RS08085 PF00664 ABC transporter transmembrane region SPYM3_RS08085 PF00005 ABC transporter SPYM3_RS08090 PF00005 ABC transporter SPYM3_RS08090 PF00664 ABC transporter transmembrane region SPYM3_RS08095 PF00005 ABC transporter SPYM3_RS08100 PF01032 FecCD transport family SPYM3_RS08105 PF01497 Periplasmic binding protein SPYM3_RS08120 PF01476 LysM domain SPYM3_RS08120 PF05257 CHAP domain SPYM3_RS08125 PF00842 Alanine racemase, C-terminal domain SPYM3_RS08125 PF01168 Alanine racemase, N-terminal domain SPYM3_RS08130 PF01648 4'-phosphopantetheinyl transferase superfamily SPYM3_RS08135 PF07517 SecA DEAD-like domain SPYM3_RS08135 PF01043 SecA preprotein cross-linking domain SPYM3_RS08135 PF07516 SecA Wing and Scaffold domain SPYM3_RS08135 PF02810 SEC-C motif SPYM3_RS08140 PF01238 Phosphomannose isomerase type I SPYM3_RS08145 PF00480 ROK family SPYM3_RS08155 PF00367 phosphotransferase system, EIIB SPYM3_RS08155 PF02378 Phosphotransferase system, EIIC SPYM3_RS08155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPYM3_RS08160 PF08244 Glycosyl hydrolases family 32 C terminal SPYM3_RS08160 PF00251 Glycosyl hydrolases family 32 N-terminal domain SPYM3_RS08165 PF00356 Bacterial regulatory proteins, lacI family SPYM3_RS08170 PF01029 NusB family SPYM3_RS08175 PF03780 Asp23 family, cell envelope-related function SPYM3_RS08180 PF09285 Elongation factor P, C-terminal SPYM3_RS08180 PF08207 Elongation factor P (EF-P) KOW-like domain SPYM3_RS08180 PF01132 Elongation factor P (EF-P) OB domain SPYM3_RS08185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPYM3_RS08190 PF01321 Creatinase/Prolidase N-terminal domain SPYM3_RS08190 PF00557 Metallopeptidase family M24 SPYM3_RS08195 PF00005 ABC transporter SPYM3_RS08195 PF17755 UvrA DNA-binding domain SPYM3_RS08195 PF17760 UvrA interaction domain SPYM3_RS08210 PF01084 Ribosomal protein S18 SPYM3_RS08215 PF00436 Single-strand binding protein family SPYM3_RS08220 PF01250 Ribosomal protein S6 SPYM3_RS08230 PF14815 NUDIX domain SPYM3_RS08230 PF00730 HhH-GPD superfamily base excision DNA repair protein SPYM3_RS08235 PF01381 Helix-turn-helix SPYM3_RS08240 PF00085 Thioredoxin SPYM3_RS08250 PF00488 MutS domain V SPYM3_RS08250 PF01713 Smr domain SPYM3_RS08265 PF01351 Ribonuclease HII SPYM3_RS08265 PF11858 Domain of unknown function (DUF3378) SPYM3_RS08270 PF10502 Signal peptidase, peptidase S26 SPYM3_RS08275 PF14490 Helix-hairpin-helix containing domain SPYM3_RS08275 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SPYM3_RS08275 PF13538 UvrD-like helicase C-terminal domain SPYM3_RS08285 PF11799 impB/mucB/samB family C-terminal domain SPYM3_RS08285 PF11798 IMS family HHH motif SPYM3_RS08285 PF00817 impB/mucB/samB family SPYM3_RS08290 PF02901 Pyruvate formate lyase-like SPYM3_RS08290 PF01228 Glycine radical SPYM3_RS08295 PF00144 Beta-lactamase SPYM3_RS08310 PF00230 Major intrinsic protein SPYM3_RS08315 PF07690 Major Facilitator Superfamily SPYM3_RS08320 PF13545 Crp-like helix-turn-helix domain SPYM3_RS08325 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPYM3_RS08325 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPYM3_RS08325 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SPYM3_RS08340 PF02575 YbaB/EbfC DNA-binding family SPYM3_RS08345 PF13411 MerR HTH family regulatory protein SPYM3_RS08345 PF07739 TipAS antibiotic-recognition domain SPYM3_RS08350 PF00929 Exonuclease SPYM3_RS08350 PF11490 DNA polymerase III polC-type N-terminus II SPYM3_RS08350 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPYM3_RS08350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPYM3_RS08350 PF14579 Helix-hairpin-helix motif SPYM3_RS08350 PF02811 PHP domain SPYM3_RS08350 PF01336 OB-fold nucleic acid binding domain SPYM3_RS08355 PF08279 HTH domain SPYM3_RS08355 PF04394 Protein of unknown function, DUF536 SPYM3_RS08365 PF01791 DeoC/LacD family aldolase SPYM3_RS08370 PF07662 Na+ dependent nucleoside transporter C-terminus SPYM3_RS08370 PF07670 Nucleoside recognition SPYM3_RS08370 PF01773 Na+ dependent nucleoside transporter N-terminus SPYM3_RS08375 PF01048 Phosphorylase superfamily SPYM3_RS08385 PF00253 Ribosomal protein S14p/S29e SPYM3_RS08390 PF00814 Glycoprotease family SPYM3_RS08395 PF00583 Acetyltransferase (GNAT) family SPYM3_RS08400 PF00814 Glycoprotease family SPYM3_RS08405 PF07288 Protein of unknown function (DUF1447) SPYM3_RS08410 PF17770 Ribonuclease J C-terminal domain SPYM3_RS08410 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SPYM3_RS08410 PF00753 Metallo-beta-lactamase superfamily SPYM3_RS08415 PF03951 Glutamine synthetase, beta-Grasp domain SPYM3_RS08415 PF00120 Glutamine synthetase, catalytic domain SPYM3_RS08420 PF13411 MerR HTH family regulatory protein SPYM3_RS08430 PF00162 Phosphoglycerate kinase SPYM3_RS08435 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SPYM3_RS08445 PF13684 Dihydroxyacetone kinase family SPYM3_RS08445 PF02734 DAK2 domain SPYM3_RS08450 PF03780 Asp23 family, cell envelope-related function SPYM3_RS08455 PF00830 Ribosomal L28 family SPYM3_RS08460 PF01116 Fructose-bisphosphate aldolase class-II SPYM3_RS08475 PF00117 Glutamine amidotransferase class-I SPYM3_RS08475 PF06418 CTP synthase N-terminus SPYM3_RS08480 PF05066 HB1, ASXL, restriction endonuclease HTH domain SPYM3_RS08485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SPYM3_RS08485 PF05698 Bacterial trigger factor protein (TF) C-terminus SPYM3_RS08485 PF05697 Bacterial trigger factor protein (TF) SPYM3_RS08490 PF00924 Mechanosensitive ion channel SPYM3_RS08495 PF04260 Protein of unknown function (DUF436) SPYM3_RS08500 PF07155 ECF-type riboflavin transporter, S component SPYM3_RS08505 PF08543 Phosphomethylpyrimidine kinase SPYM3_RS08510 PF01416 tRNA pseudouridine synthase SPYM3_RS08550 PF02595 Glycerate kinase family SPYM3_RS08555 PF12008 Type I restriction and modification enzyme - subunit R C terminal SPYM3_RS08555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SPYM3_RS08555 PF18766 SWI2/SNF2 ATPase SPYM3_RS08565 PF12161 HsdM N-terminal domain SPYM3_RS08565 PF02384 N-6 DNA Methylase SPYM3_RS08570 PF00486 Transcriptional regulatory protein, C terminal SPYM3_RS08570 PF00072 Response regulator receiver domain SPYM3_RS08580 PF02687 FtsX-like permease family SPYM3_RS08585 PF00005 ABC transporter SPYM3_RS08590 PF00664 ABC transporter transmembrane region SPYM3_RS08590 PF00005 ABC transporter SPYM3_RS08605 PF04604 Type-A lantibiotic SPYM3_RS08610 PF00232 Glycosyl hydrolase family 1 SPYM3_RS08615 PF02378 Phosphotransferase system, EIIC SPYM3_RS08615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS08620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPYM3_RS08625 PF01791 DeoC/LacD family aldolase SPYM3_RS08630 PF00294 pfkB family carbohydrate kinase SPYM3_RS08635 PF02502 Ribose/Galactose Isomerase SPYM3_RS08640 PF02502 Ribose/Galactose Isomerase SPYM3_RS08645 PF00455 DeoR C terminal sensor domain SPYM3_RS08645 PF08220 DeoR-like helix-turn-helix domain SPYM3_RS08665 PF00380 Ribosomal protein S9/S16 SPYM3_RS08670 PF00572 Ribosomal protein L13 SPYM3_RS08675 PF01381 Helix-turn-helix SPYM3_RS08685 PF02645 Uncharacterised protein, DegV family COG1307 SPYM3_RS08695 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPYM3_RS08695 PF00588 SpoU rRNA Methylase family SPYM3_RS08705 PF00636 Ribonuclease III domain SPYM3_RS08710 PF01406 tRNA synthetases class I (C) catalytic domain SPYM3_RS08710 PF09190 DALR domain SPYM3_RS08720 PF06426 Serine acetyltransferase, N-terminal SPYM3_RS08720 PF00132 Bacterial transferase hexapeptide (six repeats) SPYM3_RS08730 PF03725 3' exoribonuclease family, domain 2 SPYM3_RS08730 PF00575 S1 RNA binding domain SPYM3_RS08730 PF01138 3' exoribonuclease family, domain 1 SPYM3_RS08730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SPYM3_RS08730 PF00013 KH domain SPYM3_RS08735 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPYM3_RS08740 PF03611 PTS system sugar-specific permease component SPYM3_RS08745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS08750 PF00874 PRD domain SPYM3_RS08750 PF05043 Mga helix-turn-helix domain SPYM3_RS08750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPYM3_RS08750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS08750 PF08279 HTH domain SPYM3_RS08755 PF00312 Ribosomal protein S15 SPYM3_RS08770 PF01327 Polypeptide deformylase SPYM3_RS08775 PF03358 NADPH-dependent FMN reductase SPYM3_RS08780 PF01047 MarR family SPYM3_RS08785 PF00929 Exonuclease SPYM3_RS08785 PF14480 DNA polymerase III polC-type N-terminus I SPYM3_RS08785 PF11490 DNA polymerase III polC-type N-terminus II SPYM3_RS08785 PF07733 Bacterial DNA polymerase III alpha NTPase domain SPYM3_RS08785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SPYM3_RS08785 PF14579 Helix-hairpin-helix motif SPYM3_RS08785 PF02811 PHP domain SPYM3_RS08790 PF03129 Anticodon binding domain SPYM3_RS08790 PF04073 Aminoacyl-tRNA editing domain SPYM3_RS08790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPYM3_RS08795 PF13180 PDZ domain SPYM3_RS08795 PF02163 Peptidase family M50 SPYM3_RS08805 PF01255 Putative undecaprenyl diphosphate synthase SPYM3_RS08810 PF02699 Preprotein translocase subunit SPYM3_RS08820 PF17999 Pullulanase N1-terminal domain SPYM3_RS08820 PF00128 Alpha amylase, catalytic domain SPYM3_RS08820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SPYM3_RS08825 PF00128 Alpha amylase, catalytic domain SPYM3_RS08830 PF00005 ABC transporter SPYM3_RS08830 PF17912 MalK OB fold domain SPYM3_RS08830 PF03459 TOBE domain SPYM3_RS08835 PF13556 PucR C-terminal helix-turn-helix domain SPYM3_RS08840 PF02821 Staphylokinase/Streptokinase family SPYM3_RS08845 PF02580 D-Tyr-tRNA(Tyr) deacylase SPYM3_RS08850 PF02824 TGS domain SPYM3_RS08850 PF04607 Region found in RelA / SpoT proteins SPYM3_RS08850 PF13291 ACT domain SPYM3_RS08855 PF00746 LPXTG cell wall anchor motif SPYM3_RS08855 PF02370 M protein repeat SPYM3_RS08865 PF01609 Transposase DDE domain SPYM3_RS08865 PF13808 DDE_Tnp_1-associated SPYM3_RS08870 PF07972 NrdI Flavodoxin like SPYM3_RS08875 PF03372 Endonuclease/Exonuclease/phosphatase family SPYM3_RS08880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPYM3_RS08880 PF00367 phosphotransferase system, EIIB SPYM3_RS08880 PF02378 Phosphotransferase system, EIIC SPYM3_RS08885 PF04452 RNA methyltransferase SPYM3_RS08900 PF00425 chorismate binding enzyme SPYM3_RS08900 PF04715 Anthranilate synthase component I, N terminal region SPYM3_RS08905 PF00117 Glutamine amidotransferase class-I SPYM3_RS08910 PF16193 AAA C-terminal domain SPYM3_RS08910 PF05496 Holliday junction DNA helicase RuvB P-loop domain SPYM3_RS08910 PF12002 MgsA AAA+ ATPase C terminal SPYM3_RS08930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPYM3_RS08935 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS08940 PF00528 Binding-protein-dependent transport system inner membrane component SPYM3_RS08945 PF00005 ABC transporter SPYM3_RS08945 PF12558 ATP-binding cassette cobalt transporter SPYM3_RS08950 PF00005 ABC transporter SPYM3_RS08955 PF05532 CsbD-like SPYM3_RS08965 PF01297 Zinc-uptake complex component A periplasmic SPYM3_RS08970 PF02225 PA domain SPYM3_RS08970 PF00082 Subtilase family SPYM3_RS08970 PF06280 Fn3-like domain SPYM3_RS08975 PF00746 LPXTG cell wall anchor motif SPYM3_RS08975 PF04650 YSIRK type signal peptide SPYM3_RS08980 PF05043 Mga helix-turn-helix domain SPYM3_RS08980 PF08270 M protein trans-acting positive regulator (MGA) PRD domain SPYM3_RS08980 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SPYM3_RS08990 PF05257 CHAP domain SPYM3_RS08990 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPYM3_RS08995 PF13493 Domain of unknown function (DUF4118) SPYM3_RS08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPYM3_RS08995 PF02702 Osmosensitive K+ channel His kinase sensor domain SPYM3_RS08995 PF00512 His Kinase A (phospho-acceptor) domain SPYM3_RS09000 PF00486 Transcriptional regulatory protein, C terminal SPYM3_RS09000 PF00072 Response regulator receiver domain SPYM3_RS09005 PF02687 FtsX-like permease family SPYM3_RS09005 PF12704 MacB-like periplasmic core domain SPYM3_RS09010 PF00005 ABC transporter SPYM3_RS09035 PF13145 PPIC-type PPIASE domain SPYM3_RS09045 PF01640 Peptidase C10 family SPYM3_RS09045 PF13734 Spi protease inhibitor SPYM3_RS09060 PF04608 Phosphatidylglycerophosphatase A SPYM3_RS09065 PF00465 Iron-containing alcohol dehydrogenase SPYM3_RS09070 PF00923 Transaldolase/Fructose-6-phosphate aldolase SPYM3_RS09075 PF01228 Glycine radical SPYM3_RS09075 PF02901 Pyruvate formate lyase-like SPYM3_RS09080 PF02378 Phosphotransferase system, EIIC SPYM3_RS09085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPYM3_RS09090 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPYM3_RS09095 PF04198 Putative sugar-binding domain SPYM3_RS09100 PF08220 DeoR-like helix-turn-helix domain SPYM3_RS09100 PF00455 DeoR C terminal sensor domain SPYM3_RS09105 PF04055 Radical SAM superfamily SPYM3_RS09120 PF00912 Transglycosylase SPYM3_RS09120 PF00905 Penicillin binding protein transpeptidase domain SPYM3_RS09135 PF01479 S4 domain SPYM3_RS09135 PF00849 RNA pseudouridylate synthase SPYM3_RS09145 PF03577 Peptidase family C69 SPYM3_RS09160 PF00118 TCP-1/cpn60 chaperonin family SPYM3_RS09165 PF00166 Chaperonin 10 Kd subunit SPYM3_RS09170 PF10431 C-terminal, D2-small domain, of ClpB protein SPYM3_RS09170 PF00004 ATPase family associated with various cellular activities (AAA) SPYM3_RS09170 PF07724 AAA domain (Cdc48 subfamily) SPYM3_RS09170 PF17871 AAA lid domain SPYM3_RS09170 PF02861 Clp amino terminal domain, pathogenicity island component SPYM3_RS09175 PF05848 CtsR N-terminal HTH domain SPYM3_RS09175 PF17727 CtsR C-terminal dimerization domain SPYM3_RS09180 PF00313 'Cold-shock' DNA-binding domain SPYM3_RS09190 PF00578 AhpC/TSA family SPYM3_RS09195 PF13192 Thioredoxin domain SPYM3_RS09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPYM3_RS09200 PF01979 Amidohydrolase family SPYM3_RS09205 PF01175 Urocanase Rossmann-like domain SPYM3_RS09205 PF17391 Urocanase N-terminal domain SPYM3_RS09205 PF17392 Urocanase C-terminal domain SPYM3_RS09210 PF07837 Formiminotransferase domain, N-terminal subdomain SPYM3_RS09210 PF02971 Formiminotransferase domain SPYM3_RS09215 PF04961 Formiminotransferase-cyclodeaminase SPYM3_RS09220 PF01268 Formate--tetrahydrofolate ligase SPYM3_RS09230 PF13520 Amino acid permease SPYM3_RS09235 PF00221 Aromatic amino acid lyase SPYM3_RS09240 PF00491 Arginase family SPYM3_RS09250 PF00318 Ribosomal protein S2 SPYM3_RS09255 PF00889 Elongation factor TS SPYM3_RS09260 PF05649 Peptidase family M13 SPYM3_RS09260 PF01431 Peptidase family M13 SPYM3_RS09265 PF16657 Maltogenic Amylase, C-terminal domain SPYM3_RS09265 PF00128 Alpha amylase, catalytic domain SPYM3_RS09270 PF00367 phosphotransferase system, EIIB SPYM3_RS09270 PF02378 Phosphotransferase system, EIIC SPYM3_RS09275 PF07702 UTRA domain SPYM3_RS09275 PF00392 Bacterial regulatory proteins, gntR family SPYM3_RS09285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPYM3_RS09290 PF03883 Peroxide stress protein YaaA SPYM3_RS09305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPYM3_RS09310 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPYM3_RS09310 PF03477 ATP cone domain SPYM3_RS09320 PF06949 Protein of unknown function (DUF1292) SPYM3_RS09325 PF03652 Holliday junction resolvase SPYM3_RS09330 PF06135 IreB regulatory phosphoprotein SPYM3_RS09335 PF03960 ArsC family SPYM3_RS09340 PF00154 recA bacterial DNA recombination protein SPYM3_RS09345 PF02464 Competence-damaged protein SPYM3_RS09345 PF18146 Damage-inducible protein CinA KH domain SPYM3_RS09345 PF00994 Probable molybdopterin binding domain SPYM3_RS09350 PF00958 GMP synthase C terminal domain SPYM3_RS09350 PF03352 Methyladenine glycosylase SPYM3_RS09350 PF13673 Acetyltransferase (GNAT) domain SPYM3_RS09350 PF13302 Acetyltransferase (GNAT) domain SPYM3_RS09350 PF00117 Glutamine amidotransferase class-I SPYM3_RS09355 PF07499 RuvA, C-terminal domain SPYM3_RS09355 PF01330 RuvA N terminal domain SPYM3_RS09365 PF01119 DNA mismatch repair protein, C-terminal domain SPYM3_RS09365 PF08676 MutL C terminal dimerisation domain SPYM3_RS09370 PF05188 MutS domain II SPYM3_RS09370 PF01624 MutS domain I SPYM3_RS09370 PF05190 MutS family domain IV SPYM3_RS09370 PF05192 MutS domain III SPYM3_RS09370 PF00488 MutS domain V SPYM3_RS09380 PF02863 Arginine repressor, C-terminal domain SPYM3_RS09380 PF01316 Arginine repressor, DNA binding domain SPYM3_RS09385 PF00750 tRNA synthetases class I (R) SPYM3_RS09385 PF05746 DALR anticodon binding domain SPYM3_RS09385 PF03485 Arginyl tRNA synthetase N terminal domain SPYM3_RS09395 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYM3_RS09395 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYM3_RS09400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYM3_RS09400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYM3_RS09405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYM3_RS09405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYM3_RS09410 PF02938 GAD domain SPYM3_RS09410 PF01336 OB-fold nucleic acid binding domain SPYM3_RS09410 PF00152 tRNA synthetases class II (D, K and N) SPYM3_RS09415 PF13393 Histidyl-tRNA synthetase SPYM3_RS09415 PF03129 Anticodon binding domain SPYM3_RS09420 PF01783 Ribosomal L32p protein family SPYM3_RS09425 PF00471 Ribosomal protein L33 SPYM3_RS09435 PF01022 Bacterial regulatory protein, arsR family SPYM3_RS09465 PF00293 NUDIX domain SPYM3_RS09470 PF03551 Transcriptional regulator PadR-like family SPYM3_RS09495 PF00163 Ribosomal protein S4/S9 N-terminal domain SPYM3_RS09495 PF01479 S4 domain SPYM3_RS09505 PF03796 DnaB-like helicase C terminal domain SPYM3_RS09505 PF00772 DnaB-like helicase N terminal domain SPYM3_RS09510 PF03948 Ribosomal protein L9, C-terminal domain SPYM3_RS09510 PF01281 Ribosomal protein L9, N-terminal domain SPYM3_RS09515 PF02272 DHHA1 domain SPYM3_RS09515 PF01368 DHH family SPYM3_RS09520 PF01134 Glucose inhibited division protein A SPYM3_RS09520 PF13932 GidA associated domain SPYM3_RS09535 PF03315 Serine dehydratase beta chain SPYM3_RS09535 PF01842 ACT domain SPYM3_RS09540 PF03313 Serine dehydratase alpha chain SPYM3_RS09545 PF06737 Transglycosylase-like domain SPYM3_RS09550 PF02361 Cobalt transport protein SPYM3_RS09555 PF00005 ABC transporter SPYM3_RS09560 PF00005 ABC transporter SPYM3_RS09565 PF01066 CDP-alcohol phosphatidyltransferase SPYM3_RS09575 PF00675 Insulinase (Peptidase family M16) SPYM3_RS09575 PF05193 Peptidase M16 inactive domain SPYM3_RS09585 PF00535 Glycosyl transferase family 2 SPYM3_RS09590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPYM3_RS09590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SPYM3_RS09590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPYM3_RS09595 PF00483 Nucleotidyl transferase SPYM3_RS09605 PF02463 RecF/RecN/SMC N terminal domain SPYM3_RS09610 PF06800 Sugar transport protein SPYM3_RS09615 PF00571 CBS domain SPYM3_RS09615 PF00478 IMP dehydrogenase / GMP reductase domain SPYM3_RS09620 PF00579 tRNA synthetases class I (W and Y) SPYM3_RS09625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SPYM3_RS09625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPYM3_RS09630 PF12848 ABC transporter SPYM3_RS09630 PF00005 ABC transporter SPYM3_RS09650 PF13936 Helix-turn-helix domain SPYM3_RS09660 PF02590 Predicted SPOUT methyltransferase SPYM3_RS09665 PF13180 PDZ domain SPYM3_RS09670 PF17762 HTH domain found in ParB protein SPYM3_RS09670 PF02195 ParB-like nuclease domain