M28_RS00005 SM00382 ATPases associated with a variety of cellular activities M28_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain M28_RS00010 SM00480 DNA polymerase III beta subunit M28_RS00030 SM00487 DEAD-like helicases superfamily M28_RS00030 SM00490 helicase superfamily c-terminal domain M28_RS00030 SM00982 M28_RS00030 M28_RS00030 SM01058 CarD-like/TRCF domain M28_RS00035 SM00363 S4 RNA-binding domain M28_RS00060 SM00382 ATPases associated with a variety of cellular activities M28_RS00245 SM01400 M28_RS00245 M28_RS00270 SM01211 M28_RS00270 M28_RS00290 SM00798 AICARFT/IMPCHase bienzyme M28_RS00290 SM00851 MGS-like domain M28_RS00300 SM01209 M28_RS00300 M28_RS00300 SM01210 M28_RS00300 M28_RS00305 SM01001 AIR carboxylase M28_RS00320 SM00998 Adenylosuccinate lyase C-terminus M28_RS00325 SM00530 Helix-turn-helix XRE-family like proteins M28_RS00330 SM00382 ATPases associated with a variety of cellular activities M28_RS00335 SM00226 Low molecular weight phosphatase family M28_RS00340 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. M28_RS00355 SM00829 Enoylreductase M28_RS00365 SM01403 M28_RS00365 M28_RS00385 SM01382 M28_RS00385 M28_RS00385 SM01383 M28_RS00385 M28_RS00400 SM00322 K homology RNA-binding domain M28_RS00420 SM01374 M28_RS00420 M28_RS00425 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M28_RS00480 SM00316 Ribosomal protein S1-like RNA-binding domain M28_RS00495 SM00662 RNA polymerases D M28_RS00600 SM00347 helix_turn_helix multiple antibiotic resistance protein M28_RS00605 SM00382 ATPases associated with a variety of cellular activities M28_RS00620 SM00363 S4 RNA-binding domain M28_RS00635 SM00663 RNA polymerase I subunit A N-terminus M28_RS00780 SM00342 helix_turn_helix, arabinose operon control protein M28_RS00810 SM00882 Coenzyme A transferase M28_RS00815 SM00882 Coenzyme A transferase M28_RS00890 SM00788 Adenylosuccinate synthetase M28_RS00900 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. M28_RS00900 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M28_RS00955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family M28_RS00965 SM01007 Class II Aldolase and Adducin N-terminal domain M28_RS00980 SM00382 ATPases associated with a variety of cellular activities M28_RS00990 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs M28_RS00990 SM00474 3'-5' exonuclease M28_RS00990 SM00475 5'-3' exonuclease M28_RS00990 SM00482 DNA polymerase A domain M28_RS00995 SM00881 CoA binding domain M28_RS01015 SM00470 ParB-like nuclease domain M28_RS01080 SM00849 Metallo-beta-lactamase superfamily M28_RS01090 SM00460 Transglutaminase/protease-like homologues M28_RS01125 SM00347 helix_turn_helix multiple antibiotic resistance protein M28_RS01130 SM00382 ATPases associated with a variety of cellular activities M28_RS01135 SM00382 ATPases associated with a variety of cellular activities M28_RS01150 SM00382 ATPases associated with a variety of cellular activities M28_RS01155 SM00947 Carbonic anhydrase M28_RS01180 SM00448 cheY-homologous receiver domain M28_RS01180 SM00850 LytTr DNA-binding domain M28_RS01195 SM00393 Putative single-stranded nucleic acids-binding domain M28_RS01195 SM01245 M28_RS01195 M28_RS01230 SM01130 M28_RS01230 M28_RS01255 SM00650 Ribosomal RNA adenine dimethylases M28_RS01270 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain M28_RS01305 SM00838 Elongation factor G C-terminus M28_RS01305 SM00889 Elongation factor G, domain IV M28_RS01310 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M28_RS01315 SM00382 ATPases associated with a variety of cellular activities M28_RS01320 SM00062 Bacterial periplasmic substrate-binding proteins M28_RS01345 SM00382 ATPases associated with a variety of cellular activities M28_RS01375 SM00936 Penicillin-binding protein 5, C-terminal domain M28_RS01395 SM00382 ATPases associated with a variety of cellular activities M28_RS01400 SM00382 ATPases associated with a variety of cellular activities M28_RS01450 SM01103 M28_RS01450 M28_RS01460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M28_RS01485 SM00062 Bacterial periplasmic substrate-binding proteins M28_RS01495 SM00382 ATPases associated with a variety of cellular activities M28_RS01495 SM00930 M28_RS01495 M28_RS01545 SM00448 cheY-homologous receiver domain M28_RS01545 SM00862 Transcriptional regulatory protein, C terminal M28_RS01550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M28_RS01550 SM00387 Histidine kinase-like ATPases M28_RS01550 SM00388 His Kinase A (phosphoacceptor) domain M28_RS01575 SM00487 DEAD-like helicases superfamily M28_RS01575 SM00490 helicase superfamily c-terminal domain M28_RS01615 SM00967 RNA 2'-O ribose methyltransferase substrate binding M28_RS01650 SM00116 Domain in cystathionine beta-synthase and other proteins. M28_RS01670 SM00363 S4 RNA-binding domain M28_RS01675 SM01234 M28_RS01675 M28_RS01690 SM00014 Acid phosphatase homologues M28_RS01695 SM00729 Elongator protein 3, MiaB family, Radical SAM M28_RS01705 SM01091 Transporter associated domain M28_RS01715 SM01131 M28_RS01715 M28_RS01740 SM00382 ATPases associated with a variety of cellular activities M28_RS01955 SM00529 Helix-turn-helix diphteria tox regulatory element M28_RS01955 SM00899 M28_RS01955 M28_RS01965 SM00382 ATPases associated with a variety of cellular activities M28_RS01980 SM00382 ATPases associated with a variety of cellular activities M28_RS01980 SM00843 M28_RS01980 M28_RS01990 SM00649 Ribosomal protein L11/L12 M28_RS02025 SM00257 Lysin motif M28_RS02040 SM00986 Uracil DNA glycosylase superfamily M28_RS02040 SM00987 UreE urease accessory protein, C-terminal domain M28_RS02125 SM00530 Helix-turn-helix XRE-family like proteins M28_RS02130 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain M28_RS02130 SM01232 M28_RS02130 M28_RS02155 SM00316 Ribosomal protein S1-like RNA-binding domain M28_RS02155 SM00955 M28_RS02155 M28_RS02205 SM00354 helix_turn _helix lactose operon repressor M28_RS02220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M28_RS02225 SM00382 ATPases associated with a variety of cellular activities M28_RS02260 SM00448 cheY-homologous receiver domain M28_RS02260 SM00862 Transcriptional regulatory protein, C terminal M28_RS02265 SM00091 PAS domain M28_RS02265 SM00387 Histidine kinase-like ATPases M28_RS02265 SM00388 His Kinase A (phosphoacceptor) domain M28_RS02270 SM00849 Metallo-beta-lactamase superfamily M28_RS02275 SM00358 Double-stranded RNA binding motif M28_RS02275 SM00535 Ribonuclease III family M28_RS02280 SM00968 SMC proteins Flexible Hinge Domain M28_RS02330 SM00984 UDP binding domain M28_RS02395 SM00382 ATPases associated with a variety of cellular activities M28_RS02395 SM00962 SRP54-type protein, GTPase domain M28_RS02395 SM00963 SRP54-type protein, helical bundle domain M28_RS02405 SM01061 CAT RNA binding domain M28_RS02435 SM00316 Ribosomal protein S1-like RNA-binding domain M28_RS02435 SM00732 Likely ribonuclease with RNase H fold. M28_RS02440 SM00731 SprT homologues. M28_RS02505 SM00855 Phosphoglycerate mutase family M28_RS02585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M28_RS02595 SM00831 Cation transporter/ATPase, N-terminus M28_RS02600 SM00354 helix_turn _helix lactose operon repressor M28_RS02665 SM00937 M28_RS02665 M28_RS02670 SM00382 ATPases associated with a variety of cellular activities M28_RS02680 SM00849 Metallo-beta-lactamase superfamily M28_RS02690 SM00479 M28_RS02690 M28_RS02690 SM00487 DEAD-like helicases superfamily M28_RS02690 SM00491 M28_RS02690 M28_RS02730 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS02730 SM00866 M28_RS02730 M28_RS02755 SM00830 Chorismate mutase type II M28_RS02780 SM00387 Histidine kinase-like ATPases M28_RS02780 SM00433 TopoisomeraseII M28_RS02795 SM01192 M28_RS02795 M28_RS02795 SM01193 M28_RS02795 M28_RS02845 SM00382 ATPases associated with a variety of cellular activities M28_RS02870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M28_RS02870 SM00292 breast cancer carboxy-terminal domain M28_RS02870 SM00532 Ligase N family M28_RS02875 SM00046 Diacylglycerol kinase catalytic domain (presumed) M28_RS02910 SM00382 ATPases associated with a variety of cellular activities M28_RS02945 SM00873 B3/4 domain M28_RS02945 SM00874 tRNA synthetase B5 domain M28_RS02945 SM00896 Ferredoxin-fold anticodon binding domain M28_RS02965 SM00382 ATPases associated with a variety of cellular activities M28_RS02985 SM00062 Bacterial periplasmic substrate-binding proteins M28_RS02985 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. M28_RS03000 SM00400 zinc finger M28_RS03000 SM00493 M28_RS03000 M28_RS03035 SM00382 ATPases associated with a variety of cellular activities M28_RS03155 SM00981 M28_RS03155 M28_RS03160 SM00854 Bacterial capsule synthesis protein PGA_cap M28_RS03190 SM00363 S4 RNA-binding domain M28_RS03210 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain M28_RS03215 SM00851 MGS-like domain M28_RS03215 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M28_RS03215 SM01209 M28_RS03215 M28_RS03225 SM00382 ATPases associated with a variety of cellular activities M28_RS03295 SM00420 helix_turn_helix, Deoxyribose operon repressor M28_RS03295 SM01134 M28_RS03295 M28_RS03310 SM00047 Lysozyme subfamily 2 M28_RS03315 SM00047 Lysozyme subfamily 2 M28_RS03355 SM00382 ATPases associated with a variety of cellular activities M28_RS03375 SM00954 Region found in RelA / SpoT proteins M28_RS03380 SM00448 cheY-homologous receiver domain M28_RS03380 SM00862 Transcriptional regulatory protein, C terminal M28_RS03385 SM00387 Histidine kinase-like ATPases M28_RS03385 SM00388 His Kinase A (phosphoacceptor) domain M28_RS03435 SM00382 ATPases associated with a variety of cellular activities M28_RS03435 SM00994 ClpX C4-type zinc finger M28_RS03435 SM01086 C-terminal, D2-small domain, of ClpB protein M28_RS03450 SM00382 ATPases associated with a variety of cellular activities M28_RS03450 SM01086 C-terminal, D2-small domain, of ClpB protein M28_RS03495 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family M28_RS03510 SM00062 Bacterial periplasmic substrate-binding proteins M28_RS03520 SM00986 Uracil DNA glycosylase superfamily M28_RS03520 SM00987 UreE urease accessory protein, C-terminal domain M28_RS03530 SM01207 M28_RS03530 M28_RS03535 SM00387 Histidine kinase-like ATPases M28_RS03535 SM00433 TopoisomeraseII M28_RS03540 SM00434 DNA Topoisomerase IV M28_RS03565 SM00316 Ribosomal protein S1-like RNA-binding domain M28_RS03580 SM00450 Rhodanese Homology Domain M28_RS03635 SM00478 endonuclease III M28_RS03635 SM00525 M28_RS03635 M28_RS03680 SM00028 Tetratricopeptide repeats M28_RS03700 SM00382 ATPases associated with a variety of cellular activities M28_RS03705 SM00849 Metallo-beta-lactamase superfamily M28_RS03720 SM00382 ATPases associated with a variety of cellular activities M28_RS03730 SM00861 Transketolase, pyrimidine binding domain M28_RS03790 SM00729 Elongator protein 3, MiaB family, Radical SAM M28_RS03840 SM00838 Elongation factor G C-terminus M28_RS03885 SM00342 helix_turn_helix, arabinose operon control protein M28_RS03885 SM00448 cheY-homologous receiver domain M28_RS03900 SM00465 GIY-YIG type nucleases (URI domain) M28_RS03960 SM00448 cheY-homologous receiver domain M28_RS03960 SM00862 Transcriptional regulatory protein, C terminal M28_RS03965 SM00387 Histidine kinase-like ATPases M28_RS03965 SM00388 His Kinase A (phosphoacceptor) domain M28_RS03975 SM00382 ATPases associated with a variety of cellular activities M28_RS03980 SM01260 M28_RS03980 M28_RS03990 SM00382 ATPases associated with a variety of cellular activities M28_RS04005 SM00530 Helix-turn-helix XRE-family like proteins M28_RS04030 SM00936 Penicillin-binding protein 5, C-terminal domain M28_RS04055 SM00905 Dihydroneopterin aldolase M28_RS04070 SM00382 ATPases associated with a variety of cellular activities M28_RS04090 SM00448 cheY-homologous receiver domain M28_RS04095 SM00091 PAS domain M28_RS04105 SM00919 Malic enzyme, NAD binding domain M28_RS04105 SM01274 M28_RS04105 M28_RS04145 SM00881 CoA binding domain M28_RS04160 SM01400 M28_RS04160 M28_RS04165 SM01118 M28_RS04165 M28_RS04170 SM00954 Region found in RelA / SpoT proteins M28_RS04200 SM00382 ATPases associated with a variety of cellular activities M28_RS04210 SM01240 M28_RS04210 M28_RS04240 SM00937 M28_RS04240 M28_RS04275 SM00382 ATPases associated with a variety of cellular activities M28_RS04280 SM00382 ATPases associated with a variety of cellular activities M28_RS04295 SM00434 DNA Topoisomerase IV M28_RS04315 SM00046 Diacylglycerol kinase catalytic domain (presumed) M28_RS04345 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain M28_RS04345 SM00437 Bacterial DNA topoisomerase I DNA-binding domain M28_RS04345 SM00493 M28_RS04345 M28_RS04405 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS04405 SM00895 M28_RS04405 M28_RS04460 SM00764 Citrate lyase ligase C-terminal domain M28_RS04475 SM00530 Helix-turn-helix XRE-family like proteins M28_RS04480 SM00382 ATPases associated with a variety of cellular activities M28_RS04480 SM00962 SRP54-type protein, GTPase domain M28_RS04480 SM00963 SRP54-type protein, helical bundle domain M28_RS04490 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS04490 SM00866 M28_RS04490 M28_RS04510 SM00382 ATPases associated with a variety of cellular activities M28_RS04525 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS04535 SM00155 Phospholipase D. Active site motifs. M28_RS04555 SM00506 Appr-1"-p processing enzyme M28_RS04610 SM00382 ATPases associated with a variety of cellular activities M28_RS04640 SM00387 Histidine kinase-like ATPases M28_RS04640 SM00388 His Kinase A (phosphoacceptor) domain M28_RS04645 SM00448 cheY-homologous receiver domain M28_RS04645 SM00862 Transcriptional regulatory protein, C terminal M28_RS04660 SM00382 ATPases associated with a variety of cellular activities M28_RS04665 SM00382 ATPases associated with a variety of cellular activities M28_RS04705 SM00904 Riboflavin kinase M28_RS04735 SM00382 ATPases associated with a variety of cellular activities M28_RS04745 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS04800 SM00062 Bacterial periplasmic substrate-binding proteins M28_RS04805 SM00382 ATPases associated with a variety of cellular activities M28_RS04840 SM00481 DNA polymerase alpha chain like domain M28_RS04845 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS04850 SM00382 ATPases associated with a variety of cellular activities M28_RS04870 SM00892 DNA/RNA non-specific endonuclease M28_RS04880 SM00641 Glycosyl hydrolases family 25 M28_RS05080 SM00990 M28_RS05080 M28_RS05085 SM00942 Primase C terminal 1 (PriCT-1) M28_RS05085 SM00943 Bifunctional DNA primase/polymerase, N-terminal M28_RS05100 SM00490 helicase superfamily c-terminal domain M28_RS05130 SM00530 Helix-turn-helix XRE-family like proteins M28_RS05180 SM00530 Helix-turn-helix XRE-family like proteins M28_RS05210 SM00354 helix_turn _helix lactose operon repressor M28_RS05230 SM00354 helix_turn _helix lactose operon repressor M28_RS05250 SM00632 M28_RS05250 M28_RS05250 SM00642 Alpha-amylase domain M28_RS05250 SM01065 Starch binding domain M28_RS05255 SM00642 Alpha-amylase domain M28_RS05300 SM00487 DEAD-like helicases superfamily M28_RS05300 SM00490 helicase superfamily c-terminal domain M28_RS05305 SM00062 Bacterial periplasmic substrate-binding proteins M28_RS05305 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. M28_RS05310 SM00382 ATPases associated with a variety of cellular activities M28_RS05375 SM00363 S4 RNA-binding domain M28_RS05405 SM00857 Resolvase, N terminal domain M28_RS05445 SM00347 helix_turn_helix multiple antibiotic resistance protein M28_RS05505 SM00116 Domain in cystathionine beta-synthase and other proteins. M28_RS05530 SM00364 Leucine-rich repeats, bacterial type M28_RS05530 SM00365 Leucine-rich repeat, SDS22-like subfamily M28_RS05530 SM00369 Leucine-rich repeats, typical (most populated) subfamily M28_RS05545 SM00382 ATPases associated with a variety of cellular activities M28_RS05570 SM00487 DEAD-like helicases superfamily M28_RS05570 SM00490 helicase superfamily c-terminal domain M28_RS05640 SM00530 Helix-turn-helix XRE-family like proteins M28_RS05645 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M28_RS05675 SM00363 S4 RNA-binding domain M28_RS05725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M28_RS05730 SM00563 Phosphate acyltransferases M28_RS05750 SM00487 DEAD-like helicases superfamily M28_RS05750 SM00490 helicase superfamily c-terminal domain M28_RS05775 SM00493 M28_RS05775 M28_RS05800 SM00855 Phosphoglycerate mutase family M28_RS05815 SM00411 bacterial (prokaryotic) histone like domain M28_RS05850 SM00363 S4 RNA-binding domain M28_RS05885 SM00382 ATPases associated with a variety of cellular activities M28_RS05900 SM00382 ATPases associated with a variety of cellular activities M28_RS05900 SM01086 C-terminal, D2-small domain, of ClpB protein M28_RS05925 SM00363 S4 RNA-binding domain M28_RS05945 SM00864 Tubulin/FtsZ family, GTPase domain M28_RS05945 SM00865 Tubulin/FtsZ family, C-terminal domain M28_RS05950 SM00842 Cell division protein FtsA M28_RS05975 SM00838 Elongation factor G C-terminus M28_RS05980 SM00450 Rhodanese Homology Domain M28_RS06015 SM00354 helix_turn _helix lactose operon repressor M28_RS06070 SM00419 helix_turn_helix, cAMP Regulatory protein M28_RS06080 SM00873 B3/4 domain M28_RS06090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M28_RS06090 SM00387 Histidine kinase-like ATPases M28_RS06095 SM00342 helix_turn_helix, arabinose operon control protein M28_RS06095 SM00448 cheY-homologous receiver domain M28_RS06130 SM00047 Lysozyme subfamily 2 M28_RS06265 SM01022 M28_RS06265 M28_RS06275 SM00382 ATPases associated with a variety of cellular activities M28_RS06280 SM00470 ParB-like nuclease domain M28_RS06395 SM00530 Helix-turn-helix XRE-family like proteins M28_RS06460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M28_RS06460 SM00487 DEAD-like helicases superfamily M28_RS06585 SM00530 Helix-turn-helix XRE-family like proteins M28_RS06625 SM00530 Helix-turn-helix XRE-family like proteins M28_RS06630 SM00530 Helix-turn-helix XRE-family like proteins M28_RS06665 SM00342 helix_turn_helix, arabinose operon control protein M28_RS06705 SM00342 helix_turn_helix, arabinose operon control protein M28_RS06705 SM00448 cheY-homologous receiver domain M28_RS06710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M28_RS06750 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS06755 SM01149 M28_RS06755 M28_RS06760 SM00872 Alpha mannosidase, middle domain M28_RS06850 SM00487 DEAD-like helicases superfamily M28_RS06850 SM00490 helicase superfamily c-terminal domain M28_RS06865 SM00316 Ribosomal protein S1-like RNA-binding domain M28_RS06875 SM00421 helix_turn_helix, Lux Regulon M28_RS06875 SM00448 cheY-homologous receiver domain M28_RS06880 SM00387 Histidine kinase-like ATPases M28_RS06890 SM00220 Serine/Threonine protein kinases, catalytic domain M28_RS06890 SM00740 M28_RS06890 M28_RS06895 SM00331 Sigma factor PP2C-like phosphatases M28_RS06895 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain M28_RS06910 SM00487 DEAD-like helicases superfamily M28_RS06910 SM00490 helicase superfamily c-terminal domain M28_RS06915 SM01409 M28_RS06915 M28_RS06920 SM00072 Guanylate kinase homologues. M28_RS06925 SM00322 K homology RNA-binding domain M28_RS06925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M28_RS06940 SM00882 Coenzyme A transferase M28_RS06945 SM00882 Coenzyme A transferase M28_RS06970 SM00981 M28_RS06970 M28_RS07025 SM00382 ATPases associated with a variety of cellular activities M28_RS07035 SM00487 DEAD-like helicases superfamily M28_RS07035 SM00490 helicase superfamily c-terminal domain M28_RS07045 SM00740 M28_RS07045 M28_RS07080 SM00382 ATPases associated with a variety of cellular activities M28_RS07090 SM00861 Transketolase, pyrimidine binding domain M28_RS07190 SM01133 M28_RS07190 M28_RS07225 SM00420 helix_turn_helix, Deoxyribose operon repressor M28_RS07225 SM01134 M28_RS07225 M28_RS07270 SM00322 K homology RNA-binding domain M28_RS07300 SM00382 ATPases associated with a variety of cellular activities M28_RS07375 SM00878 Biotin carboxylase C-terminal domain M28_RS07390 SM00825 Beta-ketoacyl synthase M28_RS07395 SM00822 M28_RS07395 M28_RS07400 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M28_RS07420 SM00347 helix_turn_helix multiple antibiotic resistance protein M28_RS07430 SM00271 DnaJ molecular chaperone homology domain M28_RS07450 SM00047 Lysozyme subfamily 2 M28_RS07460 SM00855 Phosphoglycerate mutase family M28_RS07475 SM00845 GatB domain M28_RS07520 SM00870 M28_RS07520 M28_RS07535 SM00487 DEAD-like helicases superfamily M28_RS07535 SM00490 helicase superfamily c-terminal domain M28_RS07540 SM00382 ATPases associated with a variety of cellular activities M28_RS07555 SM00382 ATPases associated with a variety of cellular activities M28_RS07560 SM00382 ATPases associated with a variety of cellular activities M28_RS07565 SM00382 ATPases associated with a variety of cellular activities M28_RS07585 SM00365 Leucine-rich repeat, SDS22-like subfamily M28_RS07585 SM00369 Leucine-rich repeats, typical (most populated) subfamily M28_RS07585 SM00725 NEAr Transporter domain M28_RS07595 SM01005 Alanine racemase, C-terminal domain M28_RS07605 SM00957 SecA DEAD-like domain M28_RS07605 SM00958 SecA preprotein cross-linking domain M28_RS07630 SM00640 Glycosyl hydrolases family 32 M28_RS07635 SM00354 helix_turn _helix lactose operon repressor M28_RS07650 SM00841 Elongation factor P, C-terminal M28_RS07650 SM01185 M28_RS07650 M28_RS07665 SM00382 ATPases associated with a variety of cellular activities M28_RS07700 SM00478 endonuclease III M28_RS07715 SM00014 Acid phosphatase homologues M28_RS07720 SM00463 Small MutS-related domain M28_RS07720 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M28_RS07720 SM00534 ATPase domain of DNA mismatch repair MUTS family M28_RS07745 SM00382 ATPases associated with a variety of cellular activities M28_RS07790 SM00419 helix_turn_helix, cAMP Regulatory protein M28_RS07795 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain M28_RS07795 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal M28_RS07800 SM00530 Helix-turn-helix XRE-family like proteins M28_RS07805 SM00530 Helix-turn-helix XRE-family like proteins M28_RS07815 SM00422 helix_turn_helix, mercury resistance M28_RS07820 SM00479 M28_RS07820 M28_RS07855 SM01133 M28_RS07855 M28_RS07870 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS07900 SM00849 Metallo-beta-lactamase superfamily M28_RS07905 SM01230 M28_RS07905 M28_RS07910 SM00422 helix_turn_helix, mercury resistance M28_RS07935 SM01120 M28_RS07935 M28_RS07935 SM01121 M28_RS07935 M28_RS08045 SM00487 DEAD-like helicases superfamily M28_RS08065 SM00421 helix_turn_helix, Lux Regulon M28_RS08065 SM00448 cheY-homologous receiver domain M28_RS08080 SM00382 ATPases associated with a variety of cellular activities M28_RS08115 SM01133 M28_RS08115 M28_RS08135 SM00420 helix_turn_helix, Deoxyribose operon repressor M28_RS08135 SM01134 M28_RS08135 M28_RS08165 SM00530 Helix-turn-helix XRE-family like proteins M28_RS08185 SM00967 RNA 2'-O ribose methyltransferase substrate binding M28_RS08200 SM00840 M28_RS08200 M28_RS08220 SM00316 Ribosomal protein S1-like RNA-binding domain M28_RS08220 SM00322 K homology RNA-binding domain M28_RS08245 SM01387 M28_RS08245 M28_RS08265 SM00347 helix_turn_helix multiple antibiotic resistance protein M28_RS08270 SM00479 M28_RS08270 M28_RS08270 SM00481 DNA polymerase alpha chain like domain M28_RS08295 SM01323 M28_RS08295 M28_RS08305 SM00642 Alpha-amylase domain M28_RS08310 SM00642 Alpha-amylase domain M28_RS08315 SM00382 ATPases associated with a variety of cellular activities M28_RS08335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M28_RS08335 SM00954 Region found in RelA / SpoT proteins M28_RS08385 SM00382 ATPases associated with a variety of cellular activities M28_RS08425 SM00382 ATPases associated with a variety of cellular activities M28_RS08430 SM00382 ATPases associated with a variety of cellular activities M28_RS08495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M28_RS08495 SM00387 Histidine kinase-like ATPases M28_RS08495 SM00388 His Kinase A (phosphoacceptor) domain M28_RS08500 SM00448 cheY-homologous receiver domain M28_RS08500 SM00862 Transcriptional regulatory protein, C terminal M28_RS08510 SM00382 ATPases associated with a variety of cellular activities M28_RS08535 SM00327 von Willebrand factor (vWF) type A domain M28_RS08565 SM00892 DNA/RNA non-specific endonuclease M28_RS08610 SM00420 helix_turn_helix, Deoxyribose operon repressor M28_RS08610 SM01134 M28_RS08610 M28_RS08655 SM00530 Helix-turn-helix XRE-family like proteins M28_RS08665 SM00883 Chaperonin 10 Kd subunit M28_RS08670 SM00382 ATPases associated with a variety of cellular activities M28_RS08670 SM01086 C-terminal, D2-small domain, of ClpB protein M28_RS08680 SM00357 Cold shock protein domain M28_RS08710 SM01221 M28_RS08710 M28_RS08710 SM01222 M28_RS08710 M28_RS08745 SM01043 Bacterial transcriptional activator domain M28_RS08765 SM00642 Alpha-amylase domain M28_RS08775 SM00345 helix_turn_helix gluconate operon transcriptional repressor M28_RS08775 SM00866 M28_RS08775 M28_RS08825 SM00732 Likely ribonuclease with RNase H fold. M28_RS08840 SM00382 ATPases associated with a variety of cellular activities M28_RS08845 SM00852 Probable molybdopterin binding domain M28_RS08855 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M28_RS08865 SM00853 MutL C terminal dimerisation domain M28_RS08865 SM01340 M28_RS08865 M28_RS08875 SM00530 Helix-turn-helix XRE-family like proteins M28_RS08880 SM00530 Helix-turn-helix XRE-family like proteins M28_RS08885 SM00530 Helix-turn-helix XRE-family like proteins M28_RS08935 SM00942 Primase C terminal 1 (PriCT-1) M28_RS08985 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M28_RS08985 SM00534 ATPase domain of DNA mismatch repair MUTS family M28_RS09000 SM00836 DALR anticodon binding domain M28_RS09000 SM01016 Arginyl tRNA synthetase N terminal dom M28_RS09050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M28_RS09210 SM01040 BRO family, N-terminal domain M28_RS09230 SM00363 S4 RNA-binding domain M28_RS09230 SM01390 M28_RS09230 M28_RS09255 SM01228 M28_RS09255 M28_RS09290 SM00382 ATPases associated with a variety of cellular activities M28_RS09295 SM00382 ATPases associated with a variety of cellular activities M28_RS09325 SM00984 UDP binding domain M28_RS09350 SM00116 Domain in cystathionine beta-synthase and other proteins. M28_RS09350 SM01240 M28_RS09350 M28_RS09365 SM00382 ATPases associated with a variety of cellular activities M28_RS09400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M28_RS09405 SM00470 ParB-like nuclease domain