M28_RS00005	SSF48295	TrpR-like
M28_RS00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00010	SSF55979	DNA clamp
M28_RS00020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00020	SSF81271	TGS-like
M28_RS00025	SSF53178	Peptidyl-tRNA hydrolase-like
M28_RS00030	SSF141259	CarD-like
M28_RS00030	SSF143517	TRCF domain-like
M28_RS00030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00035	SSF55174	Alpha-L RNA-binding motif
M28_RS00045	SSF56601	beta-lactamase/transpeptidase-like
M28_RS00050	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS00055	SSF53271	PRTase-like
M28_RS00060	SSF140990	FtsH protease domain-like
M28_RS00060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00240	SSF54001	Cysteine proteinases
M28_RS00245	SSF53271	PRTase-like
M28_RS00250	SSF50249	Nucleic acid-binding proteins
M28_RS00250	SSF57863	ArfGap/RecO-like zinc finger
M28_RS00255	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
M28_RS00260	SSF47336	ACP-like
M28_RS00265	SSF56104	SAICAR synthase-like
M28_RS00270	SSF52317	Class I glutamine amidotransferase-like
M28_RS00270	SSF55326	PurM N-terminal domain-like
M28_RS00270	SSF56042	PurM C-terminal domain-like
M28_RS00275	SSF53271	PRTase-like
M28_RS00275	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
M28_RS00280	SSF55326	PurM N-terminal domain-like
M28_RS00280	SSF56042	PurM C-terminal domain-like
M28_RS00285	SSF53328	Formyltransferase
M28_RS00290	SSF52335	Methylglyoxal synthase-like
M28_RS00290	SSF53927	Cytidine deaminase-like
M28_RS00295	SSF54001	Cysteine proteinases
M28_RS00300	SSF51246	Rudiment single hybrid motif
M28_RS00300	SSF52440	PreATP-grasp domain
M28_RS00300	SSF56059	Glutathione synthetase ATP-binding domain-like
M28_RS00305	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
M28_RS00310	SSF51246	Rudiment single hybrid motif
M28_RS00310	SSF52440	PreATP-grasp domain
M28_RS00310	SSF56059	Glutathione synthetase ATP-binding domain-like
M28_RS00320	SSF48557	L-aspartase-like
M28_RS00325	SSF47413	lambda repressor-like DNA-binding domains
M28_RS00330	SSF46785	"Winged helix" DNA-binding domain
M28_RS00330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00335	SSF52788	Phosphotyrosine protein phosphatases I
M28_RS00340	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
M28_RS00345	SSF52266	SGNH hydrolase
M28_RS00350	SSF53720	ALDH-like
M28_RS00350	SSF56796	Dehydroquinate synthase-like
M28_RS00355	SSF50129	GroES-like
M28_RS00355	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS00365	SSF54999	Ribosomal protein S10
M28_RS00370	SSF50447	Translation proteins
M28_RS00375	SSF52166	Ribosomal protein L4
M28_RS00380	SSF54189	Ribosomal proteins S24e, L23 and L15e
M28_RS00385	SSF50104	Translation proteins SH3-like domain
M28_RS00385	SSF50249	Nucleic acid-binding proteins
M28_RS00390	SSF54570	Ribosomal protein S19
M28_RS00395	SSF54843	Ribosomal protein L22
M28_RS00400	SSF54814	Prokaryotic type KH domain (KH-domain type II)
M28_RS00400	SSF54821	Ribosomal protein S3 C-terminal domain
M28_RS00405	SSF54686	Ribosomal protein L16p/L10e
M28_RS00410	SSF46561	Ribosomal protein L29 (L29p)
M28_RS00415	SSF50249	Nucleic acid-binding proteins
M28_RS00420	SSF50193	Ribosomal protein L14
M28_RS00425	SSF50104	Translation proteins SH3-like domain
M28_RS00430	SSF55282	RL5-like
M28_RS00435	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
M28_RS00440	SSF56047	Ribosomal protein S8
M28_RS00445	SSF56053	Ribosomal protein L6
M28_RS00450	SSF53137	Translational machinery components
M28_RS00455	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS00455	SSF54768	dsRNA-binding domain-like
M28_RS00460	SSF55129	Ribosomal protein L30p/L7e
M28_RS00465	SSF52080	Ribosomal proteins L15p and L18e
M28_RS00470	SSF103491	Preprotein translocase SecY subunit
M28_RS00475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00480	SSF50249	Nucleic acid-binding proteins
M28_RS00485	SSF46946	S13-like H2TH domain
M28_RS00490	SSF53137	Translational machinery components
M28_RS00495	SSF47789	C-terminal domain of RNA polymerase alpha subunit
M28_RS00495	SSF55257	RBP11-like subunits of RNA polymerase
M28_RS00495	SSF56553	Insert subdomain of RNA polymerase alpha subunit
M28_RS00500	SSF64263	Prokaryotic ribosomal protein L17
M28_RS00590	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS00595	SSF55060	GHMP Kinase, C-terminal domain
M28_RS00600	SSF46785	"Winged helix" DNA-binding domain
M28_RS00605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00610	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
M28_RS00615	SSF54197	HIT-like
M28_RS00620	SSF52374	Nucleotidylyl transferase
M28_RS00620	SSF55174	Alpha-L RNA-binding motif
M28_RS00625	SSF53955	Lysozyme-like
M28_RS00625	SSF56601	beta-lactamase/transpeptidase-like
M28_RS00630	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
M28_RS00635	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
M28_RS00645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00655	SSF54523	Pili subunits
M28_RS00680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS00685	SSF53067	Actin-like ATPase domain
M28_RS00695	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
M28_RS00695	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS00700	SSF101821	Aminopeptidase/glucanase lid domain
M28_RS00700	SSF53187	Zn-dependent exopeptidases
M28_RS00710	SSF52833	Thioredoxin-like
M28_RS00715	SSF50249	Nucleic acid-binding proteins
M28_RS00720	SSF50249	Nucleic acid-binding proteins
M28_RS00725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00730	SSF51395	FMN-linked oxidoreductases
M28_RS00735	SSF118352	HSP33 redox switch-like
M28_RS00735	SSF64397	Hsp33 domain
M28_RS00750	SSF63817	Sortase
M28_RS00760	SSF51306	LexA/Signal peptidase
M28_RS00770	SSF63817	Sortase
M28_RS00780	SSF46689	Homeodomain-like
M28_RS00785	SSF49401	Bacterial adhesins
M28_RS00785	SSF49478	Cna protein B-type domain
M28_RS00800	SSF46785	"Winged helix" DNA-binding domain
M28_RS00800	SSF53850	Periplasmic binding protein-like II
M28_RS00805	SSF53901	Thiolase-like
M28_RS00810	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS00815	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS00825	SSF55298	YjgF-like
M28_RS00845	SSF81333	F1F0 ATP synthase subunit C
M28_RS00855	SSF103486	V-type ATP synthase subunit C
M28_RS00860	SSF159468	AtpF-like
M28_RS00865	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
M28_RS00865	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
M28_RS00865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00895	SSF53822	Periplasmic binding protein-like I
M28_RS00900	SSF50104	Translation proteins SH3-like domain
M28_RS00900	SSF82679	N-utilization substance G protein NusG, N-terminal domain
M28_RS00915	SSF56978	Perfringolysin
M28_RS00930	SSF53383	PLP-dependent transferases
M28_RS00935	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
M28_RS00935	SSF50677	ValRS/IleRS/LeuRS editing domain
M28_RS00935	SSF52374	Nucleotidylyl transferase
M28_RS00945	SSF52794	PTS system IIB component-like
M28_RS00950	SSF55804	Phoshotransferase/anion transport protein
M28_RS00955	SSF51366	Ribulose-phoshate binding barrel
M28_RS00960	SSF51658	Xylose isomerase-like
M28_RS00965	SSF53639	AraD/HMP-PK domain-like
M28_RS00970	SSF63520	PTS-regulatory domain, PRD
M28_RS00975	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS00980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS00980	SSF54631	CBS-domain pair
M28_RS00985	SSF161098	MetI-like
M28_RS00985	SSF53850	Periplasmic binding protein-like II
M28_RS00990	SSF47807	5' to 3' exonuclease, C-terminal subdomain
M28_RS00990	SSF53098	Ribonuclease H-like
M28_RS00990	SSF56672	DNA/RNA polymerases
M28_RS00990	SSF88723	PIN domain-like
M28_RS00995	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS01000	SSF46785	"Winged helix" DNA-binding domain
M28_RS01010	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS01015	SSF110849	ParB/Sulfiredoxin
M28_RS01025	SSF53098	Ribonuclease H-like
M28_RS01030	SSF53098	Ribonuclease H-like
M28_RS01040	SSF46689	Homeodomain-like
M28_RS01050	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
M28_RS01050	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
M28_RS01055	SSF53098	Ribonuclease H-like
M28_RS01060	SSF46689	Homeodomain-like
M28_RS01070	SSF51713	tRNA-guanine transglycosylase
M28_RS01080	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS01085	SSF53927	Cytidine deaminase-like
M28_RS01090	SSF54001	Cysteine proteinases
M28_RS01095	SSF50203	Bacterial enterotoxins
M28_RS01095	SSF54334	Superantigen toxins, C-terminal domain
M28_RS01100	SSF53697	SIS domain
M28_RS01110	SSF144091	Rhomboid-like
M28_RS01115	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS01120	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
M28_RS01120	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS01125	SSF46785	"Winged helix" DNA-binding domain
M28_RS01130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01130	SSF90123	ABC transporter transmembrane region
M28_RS01135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01135	SSF90123	ABC transporter transmembrane region
M28_RS01145	SSF51283	dUTPase-like
M28_RS01150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01150	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS01155	SSF53056	beta-carbonic anhydrase, cab
M28_RS01160	SSF51219	TRAP-like
M28_RS01165	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
M28_RS01165	SSF52374	Nucleotidylyl transferase
M28_RS01170	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS01180	SSF52172	CheY-like
M28_RS01185	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS01195	SSF82708	R3H domain
M28_RS01205	SSF51366	Ribulose-phoshate binding barrel
M28_RS01210	SSF53850	Periplasmic binding protein-like II
M28_RS01215	SSF161098	MetI-like
M28_RS01220	SSF161098	MetI-like
M28_RS01230	SSF51569	Aldolase
M28_RS01235	SSF53067	Actin-like ATPase domain
M28_RS01240	SSF46689	Homeodomain-like
M28_RS01240	SSF53697	SIS domain
M28_RS01245	SSF51556	Metallo-dependent hydrolases
M28_RS01250	SSF110455	Toprim domain
M28_RS01255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS01260	SSF50249	Nucleic acid-binding proteins
M28_RS01260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01265	SSF51366	Ribulose-phoshate binding barrel
M28_RS01270	SSF63999	Thiamin pyrophosphokinase, catalytic domain
M28_RS01275	SSF58113	Apolipoprotein A-I
M28_RS01280	SSF109604	HD-domain/PDEase-like
M28_RS01285	SSF46785	"Winged helix" DNA-binding domain
M28_RS01285	SSF53271	PRTase-like
M28_RS01295	SSF50249	Nucleic acid-binding proteins
M28_RS01300	SSF47973	Ribosomal protein S7
M28_RS01305	SSF50447	Translation proteins
M28_RS01305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01305	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS01305	SSF54980	EF-G C-terminal domain-like
M28_RS01310	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS01310	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
M28_RS01315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01320	SSF161098	MetI-like
M28_RS01320	SSF53850	Periplasmic binding protein-like II
M28_RS01345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01350	SSF101960	Stabilizer of iron transporter SufD
M28_RS01355	SSF53383	PLP-dependent transferases
M28_RS01360	SSF82649	SufE/NifU
M28_RS01365	SSF101960	Stabilizer of iron transporter SufD
M28_RS01370	SSF56601	beta-lactamase/transpeptidase-like
M28_RS01375	SSF56601	beta-lactamase/transpeptidase-like
M28_RS01375	SSF69189	Penicillin-binding protein associated domain
M28_RS01380	SSF53850	Periplasmic binding protein-like II
M28_RS01385	SSF161098	MetI-like
M28_RS01390	SSF161098	MetI-like
M28_RS01395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01440	SSF56784	HAD-like
M28_RS01445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01450	SSF75471	YhbY-like
M28_RS01455	SSF52374	Nucleotidylyl transferase
M28_RS01460	SSF109604	HD-domain/PDEase-like
M28_RS01465	SSF81301	Nucleotidyltransferase
M28_RS01470	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS01475	SSF52374	Nucleotidylyl transferase
M28_RS01480	SSF75625	YebC-like
M28_RS01485	SSF53850	Periplasmic binding protein-like II
M28_RS01490	SSF53850	Periplasmic binding protein-like II
M28_RS01495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01495	SSF55021	ACT-like
M28_RS01500	SSF161098	MetI-like
M28_RS01510	SSF118215	Proton glutamate symport protein
M28_RS01515	SSF116726	TrkA C-terminal domain-like
M28_RS01515	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS01525	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS01530	SSF140478	LemA-like
M28_RS01545	SSF46894	C-terminal effector domain of the bipartite response regulators
M28_RS01545	SSF52172	CheY-like
M28_RS01550	SSF158472	HAMP domain-like
M28_RS01550	SSF47384	Homodimeric domain of signal transducing histidine kinase
M28_RS01550	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS01565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01585	SSF51984	MurCD N-terminal domain
M28_RS01585	SSF53244	MurD-like peptide ligases, peptide-binding domain
M28_RS01585	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS01590	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS01600	SSF46557	GreA transcript cleavage protein, N-terminal domain
M28_RS01600	SSF54534	FKBP-like
M28_RS01610	SSF54975	Acylphosphatase/BLUF domain-like
M28_RS01615	SSF55315	L30e-like
M28_RS01615	SSF75217	alpha/beta knot
M28_RS01620	SSF109604	HD-domain/PDEase-like
M28_RS01635	SSF53681	Aspartate/glutamate racemase
M28_RS01640	SSF52972	ITPase-like
M28_RS01645	SSF56300	Metallo-dependent phosphatases
M28_RS01650	SSF54631	CBS-domain pair
M28_RS01655	SSF56349	DNA breaking-rejoining enzymes
M28_RS01665	SSF46785	"Winged helix" DNA-binding domain
M28_RS01670	SSF55120	Pseudouridine synthase
M28_RS01670	SSF55174	Alpha-L RNA-binding motif
M28_RS01680	SSF75217	alpha/beta knot
M28_RS01690	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
M28_RS01695	SSF102114	Radical SAM enzymes
M28_RS01700	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS01705	SSF54631	CBS-domain pair
M28_RS01705	SSF56176	FAD-binding/transporter-associated domain-like
M28_RS01710	SSF102114	Radical SAM enzymes
M28_RS01715	SSF64182	DHH phosphoesterases
M28_RS01725	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
M28_RS01730	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
M28_RS01735	SSF53807	"Helical backbone" metal receptor
M28_RS01740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01745	SSF53244	MurD-like peptide ligases, peptide-binding domain
M28_RS01745	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS01745	SSF63418	MurE/MurF N-terminal domain
M28_RS01755	SSF53271	PRTase-like
M28_RS01760	SSF52096	ClpP/crotonase
M28_RS01770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01790	SSF53790	Tetrapyrrole methylase
M28_RS01800	SSF110395	CutC-like
M28_RS01805	SSF52833	Thioredoxin-like
M28_RS01810	SSF56219	DNase I-like
M28_RS01820	SSF51395	FMN-linked oxidoreductases
M28_RS01840	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
M28_RS01840	SSF50249	Nucleic acid-binding proteins
M28_RS01840	SSF52374	Nucleotidylyl transferase
M28_RS01845	SSF47240	Ferritin-like
M28_RS01850	SSF52218	Flavoproteins
M28_RS01855	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
M28_RS01855	SSF51998	PFL-like glycyl radical enzymes
M28_RS01860	SSF56399	ADP-ribosylation
M28_RS01890	SSF50203	Bacterial enterotoxins
M28_RS01890	SSF54334	Superantigen toxins, C-terminal domain
M28_RS01915	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS01920	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS01920	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
M28_RS01925	SSF103473	MFS general substrate transporter
M28_RS01930	SSF51161	Trimeric LpxA-like enzymes
M28_RS01930	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS01935	SSF55811	Nudix
M28_RS01945	SSF53167	Purine and uridine phosphorylases
M28_RS01955	SSF46785	"Winged helix" DNA-binding domain
M28_RS01955	SSF47979	Iron-dependent repressor protein, dimerization domain
M28_RS01960	SSF53807	"Helical backbone" metal receptor
M28_RS01965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01970	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
M28_RS01975	SSF50891	Cyclophilin-like
M28_RS01980	SSF46785	"Winged helix" DNA-binding domain
M28_RS01980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS01990	SSF46906	Ribosomal protein L11, C-terminal domain
M28_RS01990	SSF54747	Ribosomal L11/L12e N-terminal domain
M28_RS01995	SSF56808	Ribosomal protein L1
M28_RS02000	SSF53633	Carbamate kinase-like
M28_RS02005	SSF55194	Ribosome recycling factor, RRF
M28_RS02010	SSF50249	Nucleic acid-binding proteins
M28_RS02015	SSF55068	Peptide methionine sulfoxide reductase
M28_RS02020	SSF140652	YozE-like
M28_RS02025	SSF54106	LysM domain
M28_RS02030	SSF51905	FAD/NAD(P)-binding domain
M28_RS02035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02040	SSF52141	Uracil-DNA glycosylase-like
M28_RS02045	SSF55486	Metalloproteases ("zincins"), catalytic domain
M28_RS02055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02055	SSF54814	Prokaryotic type KH domain (KH-domain type II)
M28_RS02060	SSF55811	Nudix
M28_RS02125	SSF47413	lambda repressor-like DNA-binding domains
M28_RS02130	SSF46946	S13-like H2TH domain
M28_RS02130	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
M28_RS02130	SSF81624	N-terminal domain of MutM-like DNA repair proteins
M28_RS02135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02145	SSF103473	MFS general substrate transporter
M28_RS02155	SSF50249	Nucleic acid-binding proteins
M28_RS02160	SSF74982	Small protein B (SmpB)
M28_RS02165	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
M28_RS02170	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
M28_RS02185	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS02190	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
M28_RS02195	SSF55469	FMN-dependent nitroreductase-like
M28_RS02200	SSF53092	Creatinase/prolidase N-terminal domain
M28_RS02200	SSF55920	Creatinase/aminopeptidase
M28_RS02205	SSF47413	lambda repressor-like DNA-binding domains
M28_RS02205	SSF53822	Periplasmic binding protein-like I
M28_RS02210	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
M28_RS02215	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
M28_RS02220	SSF52954	Class II aaRS ABD-related
M28_RS02220	SSF55186	ThrRS/AlaRS common domain
M28_RS02220	SSF55681	Class II aaRS and biotin synthetases
M28_RS02220	SSF81271	TGS-like
M28_RS02225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02245	SSF53901	Thiolase-like
M28_RS02250	SSF56801	Acetyl-CoA synthetase-like
M28_RS02260	SSF46894	C-terminal effector domain of the bipartite response regulators
M28_RS02260	SSF52172	CheY-like
M28_RS02265	SSF47384	Homodimeric domain of signal transducing histidine kinase
M28_RS02265	SSF55785	PYP-like sensor domain (PAS domain)
M28_RS02265	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS02270	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS02275	SSF54768	dsRNA-binding domain-like
M28_RS02275	SSF69065	RNase III domain-like
M28_RS02280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02280	SSF75553	Smc hinge domain
M28_RS02285	SSF47413	lambda repressor-like DNA-binding domains
M28_RS02290	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS02290	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
M28_RS02295	SSF51658	Xylose isomerase-like
M28_RS02300	SSF144010	CofE-like
M28_RS02305	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS02315	SSF53795	PEP carboxykinase-like
M28_RS02320	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS02330	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
M28_RS02330	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS02330	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
M28_RS02335	SSF103473	MFS general substrate transporter
M28_RS02340	SSF47413	lambda repressor-like DNA-binding domains
M28_RS02365	SSF143011	RelE-like
M28_RS02370	SSF55681	Class II aaRS and biotin synthetases
M28_RS02375	SSF53098	Ribonuclease H-like
M28_RS02380	SSF46689	Homeodomain-like
M28_RS02385	SSF56784	HAD-like
M28_RS02390	SSF56784	HAD-like
M28_RS02395	SSF47364	Domain of the SRP/SRP receptor G-proteins
M28_RS02395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02400	SSF103473	MFS general substrate transporter
M28_RS02405	SSF50151	SacY-like RNA-binding domain
M28_RS02405	SSF63520	PTS-regulatory domain, PRD
M28_RS02410	SSF51261	Duplicated hybrid motif
M28_RS02410	SSF55604	Glucose permease domain IIB
M28_RS02415	SSF51445	(Trans)glycosidases
M28_RS02435	SSF158832	Tex N-terminal region-like
M28_RS02435	SSF47781	RuvA domain 2-like
M28_RS02435	SSF50249	Nucleic acid-binding proteins
M28_RS02435	SSF53098	Ribonuclease H-like
M28_RS02450	SSF53795	PEP carboxykinase-like
M28_RS02450	SSF75138	HprK N-terminal domain-like
M28_RS02480	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
M28_RS02495	SSF50249	Nucleic acid-binding proteins
M28_RS02495	SSF55681	Class II aaRS and biotin synthetases
M28_RS02500	SSF56784	HAD-like
M28_RS02505	SSF53254	Phosphoglycerate mutase-like
M28_RS02510	SSF55826	YbaK/ProRS associated domain
M28_RS02520	SSF51445	(Trans)glycosidases
M28_RS02540	SSF55486	Metalloproteases ("zincins"), catalytic domain
M28_RS02545	SSF51621	Phosphoenolpyruvate/pyruvate domain
M28_RS02555	SSF50447	Translation proteins
M28_RS02555	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
M28_RS02555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02560	SSF51351	Triosephosphate isomerase (TIM)
M28_RS02565	SSF46589	tRNA-binding arm
M28_RS02565	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS02570	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS02575	SSF56784	HAD-like
M28_RS02585	SSF109604	HD-domain/PDEase-like
M28_RS02590	SSF50814	Lipocalins
M28_RS02595	SSF56784	HAD-like
M28_RS02595	SSF81653	Calcium ATPase, transduction domain A
M28_RS02595	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
M28_RS02595	SSF81665	Calcium ATPase, transmembrane domain M
M28_RS02600	SSF47413	lambda repressor-like DNA-binding domains
M28_RS02600	SSF53822	Periplasmic binding protein-like I
M28_RS02605	SSF48230	Chondroitin AC/alginate lyase
M28_RS02620	SSF52728	PTS IIb component
M28_RS02625	SSF48208	Six-hairpin glycosidases
M28_RS02630	SSF53062	PTS system fructose IIA component-like
M28_RS02635	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS02640	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
M28_RS02645	SSF53613	Ribokinase-like
M28_RS02650	SSF51569	Aldolase
M28_RS02655	SSF56784	HAD-like
M28_RS02660	SSF46548	alpha-helical ferredoxin
M28_RS02665	SSF75620	Release factor
M28_RS02670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02680	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS02685	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS02690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02690	SSF53098	Ribonuclease H-like
M28_RS02695	SSF53383	PLP-dependent transferases
M28_RS02700	SSF50249	Nucleic acid-binding proteins
M28_RS02700	SSF55681	Class II aaRS and biotin synthetases
M28_RS02705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02710	SSF142338	CofD-like
M28_RS02715	SSF55608	Homing endonucleases
M28_RS02725	SSF50814	Lipocalins
M28_RS02725	SSF53807	"Helical backbone" metal receptor
M28_RS02730	SSF46785	"Winged helix" DNA-binding domain
M28_RS02730	SSF64288	Chorismate lyase-like
M28_RS02735	SSF53697	SIS domain
M28_RS02740	SSF143800	L28p-like
M28_RS02745	SSF64182	DHH phosphoesterases
M28_RS02750	SSF52218	Flavoproteins
M28_RS02755	SSF48600	Chorismate mutase II
M28_RS02760	SSF81340	Clc chloride channel
M28_RS02765	SSF50104	Translation proteins SH3-like domain
M28_RS02775	SSF56784	HAD-like
M28_RS02780	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS02780	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS02780	SSF56719	Type II DNA topoisomerase
M28_RS02790	SSF160515	YueI-like
M28_RS02795	SSF51604	Enolase C-terminal domain-like
M28_RS02795	SSF54826	Enolase N-terminal domain-like
M28_RS02820	SSF55469	FMN-dependent nitroreductase-like
M28_RS02845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02860	SSF56219	DNase I-like
M28_RS02870	SSF47781	RuvA domain 2-like
M28_RS02870	SSF50249	Nucleic acid-binding proteins
M28_RS02870	SSF52113	BRCT domain
M28_RS02870	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
M28_RS02875	SSF111331	NAD kinase/diacylglycerol kinase-like
M28_RS02880	SSF81333	F1F0 ATP synthase subunit C
M28_RS02885	SSF81336	F1F0 ATP synthase subunit A
M28_RS02890	SSF81573	F1F0 ATP synthase subunit B, membrane domain
M28_RS02895	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
M28_RS02900	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
M28_RS02900	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
M28_RS02900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02905	SSF52943	ATP synthase (F1-ATPase), gamma subunit
M28_RS02910	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
M28_RS02910	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
M28_RS02910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02915	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
M28_RS02925	SSF55205	EPT/RTPC-like
M28_RS02940	SSF46589	tRNA-binding arm
M28_RS02940	SSF55681	Class II aaRS and biotin synthetases
M28_RS02945	SSF46955	Putative DNA-binding domain
M28_RS02945	SSF50249	Nucleic acid-binding proteins
M28_RS02945	SSF54991	Anticodon-binding domain of PheRS
M28_RS02945	SSF55681	Class II aaRS and biotin synthetases
M28_RS02945	SSF56037	PheT/TilS domain
M28_RS02950	SSF82784	OsmC-like
M28_RS02965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02975	SSF52980	Restriction endonuclease-like
M28_RS02980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS02980	SSF52980	Restriction endonuclease-like
M28_RS02985	SSF53850	Periplasmic binding protein-like II
M28_RS02995	SSF81330	Gated mechanosensitive channel
M28_RS03000	SSF56731	DNA primase core
M28_RS03000	SSF57783	Zinc beta-ribbon
M28_RS03005	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
M28_RS03005	SSF88946	Sigma2 domain of RNA polymerase sigma factors
M28_RS03010	SSF117916	Fe-S cluster assembly (FSCA) domain-like
M28_RS03015	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS03020	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
M28_RS03025	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS03035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03040	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS03055	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS03075	SSF53187	Zn-dependent exopeptidases
M28_RS03075	SSF55031	Bacterial exopeptidase dimerisation domain
M28_RS03090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03095	SSF54364	Translation initiation factor IF3, N-terminal domain
M28_RS03095	SSF55200	Translation initiation factor IF3, C-terminal domain
M28_RS03100	SSF143034	L35p-like
M28_RS03105	SSF74731	Ribosomal protein L20
M28_RS03110	SSF53649	Alkaline phosphatase-like
M28_RS03115	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS03115	SSF88697	PUA domain-like
M28_RS03120	SSF51569	Aldolase
M28_RS03125	SSF103263	Chorismate synthase, AroC
M28_RS03130	SSF158622	YheA/YmcA-like
M28_RS03135	SSF51905	FAD/NAD(P)-binding domain
M28_RS03135	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
M28_RS03140	SSF53244	MurD-like peptide ligases, peptide-binding domain
M28_RS03140	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS03150	SSF53383	PLP-dependent transferases
M28_RS03155	SSF143437	THUMP domain-like
M28_RS03155	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS03160	SSF56300	Metallo-dependent phosphatases
M28_RS03165	SSF141091	L21p-like
M28_RS03170	SSF118010	TM1457-like
M28_RS03175	SSF110324	Ribosomal L27 protein-like
M28_RS03180	SSF46785	"Winged helix" DNA-binding domain
M28_RS03180	SSF53850	Periplasmic binding protein-like II
M28_RS03190	SSF55120	Pseudouridine synthase
M28_RS03190	SSF55174	Alpha-L RNA-binding motif
M28_RS03195	SSF53271	PRTase-like
M28_RS03205	SSF53671	Aspartate/ornithine carbamoyltransferase
M28_RS03210	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
M28_RS03210	SSF52317	Class I glutamine amidotransferase-like
M28_RS03215	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
M28_RS03215	SSF52335	Methylglyoxal synthase-like
M28_RS03215	SSF52440	PreATP-grasp domain
M28_RS03215	SSF56059	Glutathione synthetase ATP-binding domain-like
M28_RS03220	SSF111369	HlyD-like secretion proteins
M28_RS03225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03235	SSF51695	PLC-like phosphodiesterases
M28_RS03240	SSF54565	Ribosomal protein S16
M28_RS03245	SSF54814	Prokaryotic type KH domain (KH-domain type II)
M28_RS03250	SSF52058	L domain-like
M28_RS03255	SSF50475	FMN-binding split barrel
M28_RS03260	SSF161111	Cation efflux protein transmembrane domain-like
M28_RS03265	SSF46689	Homeodomain-like
M28_RS03270	SSF50346	PRC-barrel domain
M28_RS03270	SSF50447	Translation proteins
M28_RS03275	SSF75217	alpha/beta knot
M28_RS03280	SSF51905	FAD/NAD(P)-binding domain
M28_RS03290	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
M28_RS03290	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS03295	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS03295	SSF46785	"Winged helix" DNA-binding domain
M28_RS03300	SSF53613	Ribokinase-like
M28_RS03305	SSF52794	PTS system IIB component-like
M28_RS03305	SSF55804	Phoshotransferase/anion transport protein
M28_RS03325	SSF54334	Superantigen toxins, C-terminal domain
M28_RS03330	SSF54001	Cysteine proteinases
M28_RS03335	SSF54919	Nucleoside diphosphate kinase, NDK
M28_RS03340	SSF54611	SecB-like
M28_RS03345	SSF82549	DAK1/DegV-like
M28_RS03350	SSF81301	Nucleotidyltransferase
M28_RS03350	SSF81891	Poly A polymerase C-terminal region-like
M28_RS03355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03365	SSF56420	Peptide deformylase
M28_RS03370	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
M28_RS03370	SSF56300	Metallo-dependent phosphatases
M28_RS03375	SSF81301	Nucleotidyltransferase
M28_RS03380	SSF46894	C-terminal effector domain of the bipartite response regulators
M28_RS03380	SSF52172	CheY-like
M28_RS03385	SSF47384	Homodimeric domain of signal transducing histidine kinase
M28_RS03385	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS03390	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS03390	SSF55060	GHMP Kinase, C-terminal domain
M28_RS03395	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS03395	SSF55060	GHMP Kinase, C-terminal domain
M28_RS03400	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS03400	SSF55060	GHMP Kinase, C-terminal domain
M28_RS03405	SSF51395	FMN-linked oxidoreductases
M28_RS03410	SSF55035	NAD-binding domain of HMG-CoA reductase
M28_RS03410	SSF56542	Substrate-binding domain of HMG-CoA reductase
M28_RS03415	SSF53901	Thiolase-like
M28_RS03420	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
M28_RS03425	SSF53597	Dihydrofolate reductase-like
M28_RS03435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03435	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
M28_RS03440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03455	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS03455	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
M28_RS03460	SSF143856	DeoB insert domain-like
M28_RS03460	SSF53649	Alkaline phosphatase-like
M28_RS03465	SSF52833	Thioredoxin-like
M28_RS03470	SSF53167	Purine and uridine phosphorylases
M28_RS03475	SSF53167	Purine and uridine phosphorylases
M28_RS03485	SSF46785	"Winged helix" DNA-binding domain
M28_RS03485	SSF53850	Periplasmic binding protein-like II
M28_RS03495	SSF51366	Ribulose-phoshate binding barrel
M28_RS03500	SSF53271	PRTase-like
M28_RS03505	SSF75304	Amidase signature (AS) enzymes
M28_RS03510	SSF53850	Periplasmic binding protein-like II
M28_RS03515	SSF161098	MetI-like
M28_RS03520	SSF52141	Uracil-DNA glycosylase-like
M28_RS03525	SSF51338	Composite domain of metallo-dependent hydrolases
M28_RS03525	SSF51556	Metallo-dependent hydrolases
M28_RS03535	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS03535	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS03535	SSF56719	Type II DNA topoisomerase
M28_RS03540	SSF101904	GyrA/ParC C-terminal domain-like
M28_RS03540	SSF56719	Type II DNA topoisomerase
M28_RS03545	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
M28_RS03565	SSF50249	Nucleic acid-binding proteins
M28_RS03580	SSF52821	Rhodanese/Cell cycle control phosphatase
M28_RS03585	SSF47616	GST C-terminal domain-like
M28_RS03595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03610	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS03615	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS03620	SSF64182	DHH phosphoesterases
M28_RS03625	SSF53271	PRTase-like
M28_RS03630	SSF158499	DnaD domain-like
M28_RS03635	SSF48150	DNA-glycosylase
M28_RS03640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS03645	SSF102705	NIF3 (NGG1p interacting factor 3)-like
M28_RS03650	SSF51905	FAD/NAD(P)-binding domain
M28_RS03650	SSF54373	FAD-linked reductases, C-terminal domain
M28_RS03655	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS03660	SSF51182	RmlC-like cupins
M28_RS03665	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS03670	SSF55811	Nudix
M28_RS03680	SSF48452	TPR-like
M28_RS03690	SSF53822	Periplasmic binding protein-like I
M28_RS03700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03705	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS03710	SSF53474	alpha/beta-Hydrolases
M28_RS03720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03725	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
M28_RS03730	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
M28_RS03730	SSF52922	TK C-terminal domain-like
M28_RS03735	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
M28_RS03735	SSF51230	Single hybrid motif
M28_RS03735	SSF52777	CoA-dependent acyltransferases
M28_RS03745	SSF51230	Single hybrid motif
M28_RS03745	SSF51905	FAD/NAD(P)-binding domain
M28_RS03745	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
M28_RS03750	SSF48230	Chondroitin AC/alginate lyase
M28_RS03750	SSF74650	Galactose mutarotase-like
M28_RS03755	SSF55681	Class II aaRS and biotin synthetases
M28_RS03755	SSF82649	SufE/NifU
M28_RS03760	SSF52317	Class I glutamine amidotransferase-like
M28_RS03765	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS03770	SSF143597	YojJ-like
M28_RS03780	SSF53738	Phosphoglucomutase, first 3 domains
M28_RS03780	SSF55957	Phosphoglucomutase, C-terminal domain
M28_RS03790	SSF102114	Radical SAM enzymes
M28_RS03795	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
M28_RS03800	SSF56784	HAD-like
M28_RS03820	SSF143430	TTP0101/SSO1404-like
M28_RS03840	SSF50447	Translation proteins
M28_RS03840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03840	SSF54980	EF-G C-terminal domain-like
M28_RS03850	SSF51316	Mss4-like
M28_RS03860	SSF53062	PTS system fructose IIA component-like
M28_RS03865	SSF52728	PTS IIb component
M28_RS03880	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS03885	SSF46689	Homeodomain-like
M28_RS03885	SSF52172	CheY-like
M28_RS03890	SSF53850	Periplasmic binding protein-like II
M28_RS03895	SSF53720	ALDH-like
M28_RS03900	SSF46600	C-terminal UvrC-binding domain of UvrB
M28_RS03900	SSF47781	RuvA domain 2-like
M28_RS03900	SSF82771	GIY-YIG endonuclease
M28_RS03905	SSF55469	FMN-dependent nitroreductase-like
M28_RS03910	SSF53187	Zn-dependent exopeptidases
M28_RS03910	SSF55031	Bacterial exopeptidase dimerisation domain
M28_RS03915	SSF116878	TrmE connector domain
M28_RS03915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03920	SSF160369	Ribosomal protein L10-like
M28_RS03925	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
M28_RS03925	SSF54736	ClpS-like
M28_RS03935	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS03960	SSF52172	CheY-like
M28_RS03965	SSF47384	Homodimeric domain of signal transducing histidine kinase
M28_RS03965	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS03975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS03975	SSF90123	ABC transporter transmembrane region
M28_RS03980	SSF158745	LanC-like
M28_RS03990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04005	SSF47413	lambda repressor-like DNA-binding domains
M28_RS04020	SSF56349	DNA breaking-rejoining enzymes
M28_RS04025	SSF56349	DNA breaking-rejoining enzymes
M28_RS04030	SSF56601	beta-lactamase/transpeptidase-like
M28_RS04030	SSF69189	Penicillin-binding protein associated domain
M28_RS04035	SSF88713	Glycoside hydrolase/deacetylase
M28_RS04040	SSF53244	MurD-like peptide ligases, peptide-binding domain
M28_RS04040	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS04045	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
M28_RS04050	SSF51717	Dihydropteroate synthetase-like
M28_RS04055	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
M28_RS04060	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
M28_RS04065	SSF56176	FAD-binding/transporter-associated domain-like
M28_RS04065	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
M28_RS04070	SSF50331	MOP-like
M28_RS04070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04075	SSF161098	MetI-like
M28_RS04080	SSF161098	MetI-like
M28_RS04085	SSF53850	Periplasmic binding protein-like II
M28_RS04090	SSF46785	"Winged helix" DNA-binding domain
M28_RS04090	SSF52172	CheY-like
M28_RS04095	SSF103190	Sensory domain-like
M28_RS04095	SSF55890	Sporulation response regulatory protein Spo0B
M28_RS04105	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS04105	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
M28_RS04110	SSF50129	GroES-like
M28_RS04110	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS04115	SSF56784	HAD-like
M28_RS04120	SSF81340	Clc chloride channel
M28_RS04125	SSF52266	SGNH hydrolase
M28_RS04135	SSF47781	RuvA domain 2-like
M28_RS04140	SSF52317	Class I glutamine amidotransferase-like
M28_RS04145	SSF46785	"Winged helix" DNA-binding domain
M28_RS04145	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS04150	SSF160800	Lp2179-like
M28_RS04155	SSF53383	PLP-dependent transferases
M28_RS04160	SSF53271	PRTase-like
M28_RS04165	SSF55154	CYTH-like phosphatases
M28_RS04170	SSF81301	Nucleotidyltransferase
M28_RS04175	SSF111331	NAD kinase/diacylglycerol kinase-like
M28_RS04180	SSF55120	Pseudouridine synthase
M28_RS04185	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
M28_RS04190	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS04200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04205	SSF161098	MetI-like
M28_RS04205	SSF53850	Periplasmic binding protein-like II
M28_RS04210	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
M28_RS04215	SSF53271	PRTase-like
M28_RS04225	SSF143631	ApbE-like
M28_RS04230	SSF55331	Tautomerase/MIF
M28_RS04235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04235	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
M28_RS04240	SSF75620	Release factor
M28_RS04245	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS04250	SSF55821	YrdC/RibB
M28_RS04255	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS04260	SSF53383	PLP-dependent transferases
M28_RS04270	SSF53955	Lysozyme-like
M28_RS04275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04275	SSF90123	ABC transporter transmembrane region
M28_RS04280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04280	SSF90123	ABC transporter transmembrane region
M28_RS04285	SSF51905	FAD/NAD(P)-binding domain
M28_RS04285	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
M28_RS04290	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS04290	SSF56327	LDH C-terminal domain-like
M28_RS04295	SSF101904	GyrA/ParC C-terminal domain-like
M28_RS04295	SSF56719	Type II DNA topoisomerase
M28_RS04300	SSF63817	Sortase
M28_RS04305	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
M28_RS04310	SSF58113	Apolipoprotein A-I
M28_RS04315	SSF111331	NAD kinase/diacylglycerol kinase-like
M28_RS04330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04335	SSF53098	Ribonuclease H-like
M28_RS04340	SSF102405	MCP/YpsA-like
M28_RS04345	SSF56712	Prokaryotic type I DNA topoisomerase
M28_RS04345	SSF57783	Zinc beta-ribbon
M28_RS04350	SSF53850	Periplasmic binding protein-like II
M28_RS04360	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS04360	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
M28_RS04375	SSF51905	FAD/NAD(P)-binding domain
M28_RS04380	SSF51569	Aldolase
M28_RS04380	SSF89000	post-HMGL domain-like
M28_RS04390	SSF51230	Single hybrid motif
M28_RS04405	SSF46785	"Winged helix" DNA-binding domain
M28_RS04405	SSF48008	GntR ligand-binding domain-like
M28_RS04420	SSF51230	Single hybrid motif
M28_RS04440	SSF51621	Phosphoenolpyruvate/pyruvate domain
M28_RS04445	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS04455	SSF51569	Aldolase
M28_RS04455	SSF89000	post-HMGL domain-like
M28_RS04460	SSF52374	Nucleotidylyl transferase
M28_RS04460	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS04470	SSF56349	DNA breaking-rejoining enzymes
M28_RS04475	SSF47413	lambda repressor-like DNA-binding domains
M28_RS04475	SSF51306	LexA/Signal peptidase
M28_RS04480	SSF47446	Signal peptide-binding domain
M28_RS04480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04485	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
M28_RS04490	SSF46785	"Winged helix" DNA-binding domain
M28_RS04490	SSF64288	Chorismate lyase-like
M28_RS04495	SSF51126	Pectin lyase-like
M28_RS04500	SSF52317	Class I glutamine amidotransferase-like
M28_RS04500	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS04500	SSF54810	GMP synthetase C-terminal dimerisation domain
M28_RS04505	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS04510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04520	SSF53613	Ribokinase-like
M28_RS04525	SSF46785	"Winged helix" DNA-binding domain
M28_RS04525	SSF53383	PLP-dependent transferases
M28_RS04535	SSF56024	Phospholipase D/nuclease
M28_RS04540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04545	SSF55681	Class II aaRS and biotin synthetases
M28_RS04545	SSF82649	SufE/NifU
M28_RS04550	SSF52467	DHS-like NAD/FAD-binding domain
M28_RS04555	SSF52949	Macro domain-like
M28_RS04560	SSF51230	Single hybrid motif
M28_RS04565	SSF51679	Bacterial luciferase-like
M28_RS04570	SSF51395	FMN-linked oxidoreductases
M28_RS04575	SSF55681	Class II aaRS and biotin synthetases
M28_RS04580	SSF102645	CoaB-like
M28_RS04585	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
M28_RS04595	SSF53738	Phosphoglucomutase, first 3 domains
M28_RS04595	SSF55957	Phosphoglucomutase, C-terminal domain
M28_RS04610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04615	SSF53822	Periplasmic binding protein-like I
M28_RS04620	SSF53927	Cytidine deaminase-like
M28_RS04625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS04630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04635	SSF46992	Ribosomal protein S20
M28_RS04640	SSF47384	Homodimeric domain of signal transducing histidine kinase
M28_RS04640	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS04645	SSF52172	CheY-like
M28_RS04650	SSF55486	Metalloproteases ("zincins"), catalytic domain
M28_RS04650	SSF63737	Leukotriene A4 hydrolase N-terminal domain
M28_RS04655	SSF109755	PhoU-like
M28_RS04660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04670	SSF161098	MetI-like
M28_RS04680	SSF53850	Periplasmic binding protein-like II
M28_RS04685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS04690	SSF56655	Carbohydrate phosphatase
M28_RS04695	SSF158504	BH2638-like
M28_RS04700	SSF52833	Thioredoxin-like
M28_RS04705	SSF52374	Nucleotidylyl transferase
M28_RS04705	SSF82114	Riboflavin kinase-like
M28_RS04710	SSF55120	Pseudouridine synthase
M28_RS04725	SSF116734	DNA methylase specificity domain
M28_RS04735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04740	SSF46689	Homeodomain-like
M28_RS04745	SSF116726	TrkA C-terminal domain-like
M28_RS04745	SSF46785	"Winged helix" DNA-binding domain
M28_RS04755	SSF69047	Hypothetical protein YjbJ
M28_RS04780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04790	SSF160240	Cation efflux protein cytoplasmic domain-like
M28_RS04790	SSF161111	Cation efflux protein transmembrane domain-like
M28_RS04800	SSF53850	Periplasmic binding protein-like II
M28_RS04805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04810	SSF161098	MetI-like
M28_RS04815	SSF57783	Zinc beta-ribbon
M28_RS04815	SSF82057	Prokaryotic SH3-related domain
M28_RS04820	SSF53697	SIS domain
M28_RS04820	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
M28_RS04825	SSF51306	LexA/Signal peptidase
M28_RS04830	SSF50800	PK beta-barrel domain-like
M28_RS04830	SSF51621	Phosphoenolpyruvate/pyruvate domain
M28_RS04830	SSF52935	PK C-terminal domain-like
M28_RS04835	SSF53784	Phosphofructokinase
M28_RS04840	SSF89550	PHP domain-like
M28_RS04845	SSF46785	"Winged helix" DNA-binding domain
M28_RS04850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS04875	SSF50203	Bacterial enterotoxins
M28_RS04875	SSF54334	Superantigen toxins, C-terminal domain
M28_RS04880	SSF51445	(Trans)glycosidases
M28_RS04905	SSF58113	Apolipoprotein A-I
M28_RS04915	SSF69349	Phage fibre proteins
M28_RS05005	SSF56399	ADP-ribosylation
M28_RS05025	SSF54786	YcfA/nrd intein domain
M28_RS05030	SSF143100	TTHA1013/TTHA0281-like
M28_RS05055	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS05085	SSF56747	Prim-pol domain
M28_RS05100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05125	SSF46955	Putative DNA-binding domain
M28_RS05130	SSF47413	lambda repressor-like DNA-binding domains
M28_RS05155	SSF47413	lambda repressor-like DNA-binding domains
M28_RS05180	SSF47413	lambda repressor-like DNA-binding domains
M28_RS05180	SSF51306	LexA/Signal peptidase
M28_RS05185	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
M28_RS05190	SSF56349	DNA breaking-rejoining enzymes
M28_RS05200	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
M28_RS05205	SSF51445	(Trans)glycosidases
M28_RS05210	SSF47413	lambda repressor-like DNA-binding domains
M28_RS05210	SSF53822	Periplasmic binding protein-like I
M28_RS05215	SSF53850	Periplasmic binding protein-like II
M28_RS05220	SSF160964	MalF N-terminal region-like
M28_RS05220	SSF161098	MetI-like
M28_RS05225	SSF161098	MetI-like
M28_RS05230	SSF47413	lambda repressor-like DNA-binding domains
M28_RS05240	SSF161098	MetI-like
M28_RS05245	SSF160964	MalF N-terminal region-like
M28_RS05245	SSF161098	MetI-like
M28_RS05250	SSF49452	Starch-binding domain-like
M28_RS05250	SSF51011	Glycosyl hydrolase domain
M28_RS05250	SSF51445	(Trans)glycosidases
M28_RS05250	SSF81296	E set domains
M28_RS05255	SSF51445	(Trans)glycosidases
M28_RS05255	SSF81296	E set domains
M28_RS05260	SSF53850	Periplasmic binding protein-like II
M28_RS05270	SSF53474	alpha/beta-Hydrolases
M28_RS05280	SSF47336	ACP-like
M28_RS05290	SSF56801	Acetyl-CoA synthetase-like
M28_RS05300	SSF46600	C-terminal UvrC-binding domain of UvrB
M28_RS05300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05305	SSF161098	MetI-like
M28_RS05305	SSF53850	Periplasmic binding protein-like II
M28_RS05310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05320	SSF55961	Bet v1-like
M28_RS05325	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
M28_RS05330	SSF52794	PTS system IIB component-like
M28_RS05335	SSF46785	"Winged helix" DNA-binding domain
M28_RS05335	SSF52794	PTS system IIB component-like
M28_RS05335	SSF55804	Phoshotransferase/anion transport protein
M28_RS05335	SSF63520	PTS-regulatory domain, PRD
M28_RS05340	SSF50891	Cyclophilin-like
M28_RS05340	SSF51445	(Trans)glycosidases
M28_RS05345	SSF51445	(Trans)glycosidases
M28_RS05360	SSF102741	Obg GTP-binding protein C-terminal domain
M28_RS05360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05360	SSF82051	Obg GTP-binding protein N-terminal domain
M28_RS05365	SSF46689	Homeodomain-like
M28_RS05370	SSF53098	Ribonuclease H-like
M28_RS05375	SSF55120	Pseudouridine synthase
M28_RS05375	SSF55174	Alpha-L RNA-binding motif
M28_RS05380	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
M28_RS05385	SSF103473	MFS general substrate transporter
M28_RS05395	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
M28_RS05405	SSF53041	Resolvase-like
M28_RS05445	SSF46785	"Winged helix" DNA-binding domain
M28_RS05465	SSF55961	Bet v1-like
M28_RS05475	SSF50249	Nucleic acid-binding proteins
M28_RS05475	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS05485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05490	SSF55205	EPT/RTPC-like
M28_RS05500	SSF55920	Creatinase/aminopeptidase
M28_RS05505	SSF46785	"Winged helix" DNA-binding domain
M28_RS05505	SSF54631	CBS-domain pair
M28_RS05505	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
M28_RS05505	SSF75138	HprK N-terminal domain-like
M28_RS05520	SSF55205	EPT/RTPC-like
M28_RS05525	SSF55973	S-adenosylmethionine synthetase
M28_RS05530	SSF142887	PhtA domain-like
M28_RS05530	SSF52058	L domain-like
M28_RS05535	SSF46785	"Winged helix" DNA-binding domain
M28_RS05535	SSF50037	C-terminal domain of transcriptional repressors
M28_RS05535	SSF55681	Class II aaRS and biotin synthetases
M28_RS05545	SSF48019	post-AAA+ oligomerization domain-like
M28_RS05545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05550	SSF55781	GAF domain-like
M28_RS05565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05575	SSF144015	Peptidoglycan deacetylase N-terminal noncatalytic region
M28_RS05575	SSF88713	Glycoside hydrolase/deacetylase
M28_RS05580	SSF53720	ALDH-like
M28_RS05585	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
M28_RS05585	SSF51621	Phosphoenolpyruvate/pyruvate domain
M28_RS05585	SSF52009	Phosphohistidine domain
M28_RS05590	SSF55594	HPr-like
M28_RS05595	SSF52833	Thioredoxin-like
M28_RS05600	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
M28_RS05600	SSF51998	PFL-like glycyl radical enzymes
M28_RS05605	SSF47240	Ferritin-like
M28_RS05610	SSF81340	Clc chloride channel
M28_RS05615	SSF46689	Homeodomain-like
M28_RS05625	SSF53098	Ribonuclease H-like
M28_RS05640	SSF47413	lambda repressor-like DNA-binding domains
M28_RS05645	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
M28_RS05645	SSF50447	Translation proteins
M28_RS05645	SSF55186	ThrRS/AlaRS common domain
M28_RS05645	SSF55681	Class II aaRS and biotin synthetases
M28_RS05650	SSF109998	Triger factor/SurA peptide-binding domain-like
M28_RS05650	SSF54534	FKBP-like
M28_RS05655	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS05660	SSF103473	MFS general substrate transporter
M28_RS05665	SSF55486	Metalloproteases ("zincins"), catalytic domain
M28_RS05675	SSF55120	Pseudouridine synthase
M28_RS05675	SSF55174	Alpha-L RNA-binding motif
M28_RS05680	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS05685	SSF111337	QueA-like
M28_RS05695	SSF56601	beta-lactamase/transpeptidase-like
M28_RS05700	SSF56601	beta-lactamase/transpeptidase-like
M28_RS05710	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
M28_RS05710	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
M28_RS05715	SSF48019	post-AAA+ oligomerization domain-like
M28_RS05715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05725	SSF47781	RuvA domain 2-like
M28_RS05730	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
M28_RS05735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS05740	SSF82771	GIY-YIG endonuclease
M28_RS05750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05755	SSF50447	Translation proteins
M28_RS05755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05755	SSF54980	EF-G C-terminal domain-like
M28_RS05765	SSF53244	MurD-like peptide ligases, peptide-binding domain
M28_RS05765	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS05765	SSF63418	MurE/MurF N-terminal domain
M28_RS05770	SSF52440	PreATP-grasp domain
M28_RS05770	SSF56059	Glutathione synthetase ATP-binding domain-like
M28_RS05775	SSF111304	Recombination protein RecR
M28_RS05795	SSF46785	"Winged helix" DNA-binding domain
M28_RS05795	SSF75500	Putative transcriptional regulator TM1602, C-terminal domain
M28_RS05800	SSF53254	Phosphoglycerate mutase-like
M28_RS05805	SSF51395	FMN-linked oxidoreductases
M28_RS05810	SSF56784	HAD-like
M28_RS05810	SSF81653	Calcium ATPase, transduction domain A
M28_RS05810	SSF81665	Calcium ATPase, transmembrane domain M
M28_RS05815	SSF47729	IHF-like DNA-binding proteins
M28_RS05825	SSF52266	SGNH hydrolase
M28_RS05830	SSF82549	DAK1/DegV-like
M28_RS05840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05845	SSF46785	"Winged helix" DNA-binding domain
M28_RS05845	SSF55252	C-terminal domain of arginine repressor
M28_RS05850	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS05850	SSF55174	Alpha-L RNA-binding motif
M28_RS05855	SSF48576	Terpenoid synthases
M28_RS05860	SSF116842	XseB-like
M28_RS05870	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS05870	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
M28_RS05875	SSF53738	Phosphoglucomutase, first 3 domains
M28_RS05875	SSF55957	Phosphoglucomutase, C-terminal domain
M28_RS05880	SSF48173	Cryptochrome/photolyase FAD-binding domain
M28_RS05880	SSF52425	Cryptochrome/photolyase, N-terminal domain
M28_RS05885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05890	SSF161098	MetI-like
M28_RS05895	SSF143567	YkuJ-like
M28_RS05900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05905	SSF55811	Nudix
M28_RS05915	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
M28_RS05915	SSF50677	ValRS/IleRS/LeuRS editing domain
M28_RS05915	SSF52374	Nucleotidylyl transferase
M28_RS05925	SSF55174	Alpha-L RNA-binding motif
M28_RS05940	SSF51419	PLP-binding barrel
M28_RS05945	SSF52490	Tubulin nucleotide-binding domain-like
M28_RS05945	SSF55307	Tubulin C-terminal domain-like
M28_RS05950	SSF53067	Actin-like ATPase domain
M28_RS05960	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
M28_RS05965	SSF51984	MurCD N-terminal domain
M28_RS05965	SSF53244	MurD-like peptide ligases, peptide-binding domain
M28_RS05965	SSF53623	MurD-like peptide ligases, catalytic domain
M28_RS05975	SSF50447	Translation proteins
M28_RS05975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS05975	SSF54980	EF-G C-terminal domain-like
M28_RS05980	SSF52821	Rhodanese/Cell cycle control phosphatase
M28_RS05985	SSF53067	Actin-like ATPase domain
M28_RS05990	SSF158379	YqgQ-like
M28_RS05995	SSF47240	Ferritin-like
M28_RS06005	SSF102114	Radical SAM enzymes
M28_RS06015	SSF47413	lambda repressor-like DNA-binding domains
M28_RS06015	SSF53822	Periplasmic binding protein-like I
M28_RS06020	SSF50156	PDZ domain-like
M28_RS06020	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS06025	SSF52374	Nucleotidylyl transferase
M28_RS06030	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS06035	SSF55681	Class II aaRS and biotin synthetases
M28_RS06040	SSF53633	Carbamate kinase-like
M28_RS06045	SSF53187	Zn-dependent exopeptidases
M28_RS06045	SSF55031	Bacterial exopeptidase dimerisation domain
M28_RS06055	SSF53671	Aspartate/ornithine carbamoyltransferase
M28_RS06060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS06065	SSF55909	Pentein
M28_RS06070	SSF46785	"Winged helix" DNA-binding domain
M28_RS06070	SSF51206	cAMP-binding domain-like
M28_RS06075	SSF46785	"Winged helix" DNA-binding domain
M28_RS06075	SSF55252	C-terminal domain of arginine repressor
M28_RS06080	SSF56037	PheT/TilS domain
M28_RS06085	SSF142906	YjbR-like
M28_RS06085	SSF88697	PUA domain-like
M28_RS06090	SSF158472	HAMP domain-like
M28_RS06090	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS06095	SSF46689	Homeodomain-like
M28_RS06095	SSF52172	CheY-like
M28_RS06110	SSF48619	Phospholipase A2, PLA2
M28_RS06115	SSF54334	Superantigen toxins, C-terminal domain
M28_RS06130	SSF54001	Cysteine proteinases
M28_RS06160	SSF58113	Apolipoprotein A-I
M28_RS06170	SSF69349	Phage fibre proteins
M28_RS06185	SSF58113	Apolipoprotein A-I
M28_RS06225	SSF56563	Major capsid protein gp5
M28_RS06265	SSF88697	PUA domain-like
M28_RS06270	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS06275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06280	SSF110849	ParB/Sulfiredoxin
M28_RS06295	SSF159006	YopX-like
M28_RS06320	SSF103084	Holliday junction resolvase RusA
M28_RS06330	SSF50249	Nucleic acid-binding proteins
M28_RS06355	SSF158499	DnaD domain-like
M28_RS06395	SSF47413	lambda repressor-like DNA-binding domains
M28_RS06410	SSF56349	DNA breaking-rejoining enzymes
M28_RS06415	SSF51316	Mss4-like
M28_RS06415	SSF55068	Peptide methionine sulfoxide reductase
M28_RS06420	SSF52833	Thioredoxin-like
M28_RS06430	SSF143430	TTP0101/SSO1404-like
M28_RS06460	SSF109604	HD-domain/PDEase-like
M28_RS06460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06465	SSF46589	tRNA-binding arm
M28_RS06465	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
M28_RS06465	SSF50677	ValRS/IleRS/LeuRS editing domain
M28_RS06465	SSF52374	Nucleotidylyl transferase
M28_RS06470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06475	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS06480	SSF47794	Rad51 N-terminal domain-like
M28_RS06485	SSF140121	SPy1572-like
M28_RS06500	SSF56349	DNA breaking-rejoining enzymes
M28_RS06525	SSF54001	Cysteine proteinases
M28_RS06540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06585	SSF47413	lambda repressor-like DNA-binding domains
M28_RS06590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06620	SSF52833	Thioredoxin-like
M28_RS06625	SSF47413	lambda repressor-like DNA-binding domains
M28_RS06630	SSF47413	lambda repressor-like DNA-binding domains
M28_RS06645	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
M28_RS06665	SSF46689	Homeodomain-like
M28_RS06670	SSF51569	Aldolase
M28_RS06675	SSF56796	Dehydroquinate synthase-like
M28_RS06680	SSF51182	RmlC-like cupins
M28_RS06685	SSF51182	RmlC-like cupins
M28_RS06690	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS06695	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS06695	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
M28_RS06700	SSF49303	beta-Galactosidase/glucuronidase domain
M28_RS06700	SSF49785	Galactose-binding domain-like
M28_RS06700	SSF51445	(Trans)glycosidases
M28_RS06705	SSF46689	Homeodomain-like
M28_RS06705	SSF52172	CheY-like
M28_RS06710	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS06720	SSF53850	Periplasmic binding protein-like II
M28_RS06725	SSF161098	MetI-like
M28_RS06730	SSF161098	MetI-like
M28_RS06735	SSF53067	Actin-like ATPase domain
M28_RS06740	SSF51445	(Trans)glycosidases
M28_RS06745	SSF51445	(Trans)glycosidases
M28_RS06745	SSF55545	beta-N-acetylhexosaminidase-like domain
M28_RS06750	SSF46785	"Winged helix" DNA-binding domain
M28_RS06750	SSF53822	Periplasmic binding protein-like I
M28_RS06755	SSF48208	Six-hairpin glycosidases
M28_RS06760	SSF74650	Galactose mutarotase-like
M28_RS06760	SSF88688	Families 57/38 glycoside transferase middle domain
M28_RS06760	SSF88713	Glycoside hydrolase/deacetylase
M28_RS06770	SSF50249	Nucleic acid-binding proteins
M28_RS06770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS06780	SSF159234	FomD-like
M28_RS06840	SSF69754	Ribosome binding protein Y (YfiA homologue)
M28_RS06845	SSF53271	PRTase-like
M28_RS06850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06855	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS06855	SSF54980	EF-G C-terminal domain-like
M28_RS06860	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
M28_RS06865	SSF50249	Nucleic acid-binding proteins
M28_RS06870	SSF50891	Cyclophilin-like
M28_RS06870	SSF56784	HAD-like
M28_RS06875	SSF46894	C-terminal effector domain of the bipartite response regulators
M28_RS06875	SSF52172	CheY-like
M28_RS06880	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS06890	SSF56112	Protein kinase-like (PK-like)
M28_RS06895	SSF81606	PP2C-like
M28_RS06900	SSF48013	NusB-like
M28_RS06900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS06905	SSF50486	FMT C-terminal domain-like
M28_RS06905	SSF53328	Formyltransferase
M28_RS06910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06915	SSF63562	RPB6/omega subunit-like
M28_RS06920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS06925	SSF109604	HD-domain/PDEase-like
M28_RS06925	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
M28_RS06930	SSF46785	"Winged helix" DNA-binding domain
M28_RS06930	SSF53850	Periplasmic binding protein-like II
M28_RS06935	SSF53901	Thiolase-like
M28_RS06940	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS06945	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS06950	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS06960	SSF63411	LuxS/MPP-like metallohydrolase
M28_RS06970	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS06980	SSF102405	MCP/YpsA-like
M28_RS06985	SSF52980	Restriction endonuclease-like
M28_RS06990	SSF53955	Lysozyme-like
M28_RS06990	SSF56601	beta-lactamase/transpeptidase-like
M28_RS06995	SSF54001	Cysteine proteinases
M28_RS07000	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS07005	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
M28_RS07005	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
M28_RS07015	SSF51905	FAD/NAD(P)-binding domain
M28_RS07025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07030	SSF161098	MetI-like
M28_RS07035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07045	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
M28_RS07045	SSF56519	Penicillin binding protein dimerisation domain
M28_RS07045	SSF56601	beta-lactamase/transpeptidase-like
M28_RS07055	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS07055	SSF81799	Putative methyltransferase TM0872, insert domain
M28_RS07065	SSF53720	ALDH-like
M28_RS07070	SSF53633	Carbamate kinase-like
M28_RS07080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07085	SSF109797	Bacteriocin immunity protein-like
M28_RS07090	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
M28_RS07090	SSF52922	TK C-terminal domain-like
M28_RS07095	SSF51569	Aldolase
M28_RS07105	SSF51905	FAD/NAD(P)-binding domain
M28_RS07105	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
M28_RS07110	SSF81338	Aquaporin-like
M28_RS07115	SSF51905	FAD/NAD(P)-binding domain
M28_RS07115	SSF54373	FAD-linked reductases, C-terminal domain
M28_RS07120	SSF53067	Actin-like ATPase domain
M28_RS07130	SSF158221	YnzC-like
M28_RS07135	SSF109604	HD-domain/PDEase-like
M28_RS07140	SSF55681	Class II aaRS and biotin synthetases
M28_RS07150	SSF51430	NAD(P)-linked oxidoreductase
M28_RS07155	SSF51338	Composite domain of metallo-dependent hydrolases
M28_RS07155	SSF51556	Metallo-dependent hydrolases
M28_RS07160	SSF109755	PhoU-like
M28_RS07170	SSF82549	DAK1/DegV-like
M28_RS07175	SSF46689	Homeodomain-like
M28_RS07180	SSF56784	HAD-like
M28_RS07190	SSF51569	Aldolase
M28_RS07195	SSF53613	Ribokinase-like
M28_RS07200	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
M28_RS07205	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
M28_RS07215	SSF52794	PTS system IIB component-like
M28_RS07220	SSF55804	Phoshotransferase/anion transport protein
M28_RS07225	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS07225	SSF46785	"Winged helix" DNA-binding domain
M28_RS07230	SSF55008	HMA, heavy metal-associated domain
M28_RS07235	SSF55008	HMA, heavy metal-associated domain
M28_RS07235	SSF56784	HAD-like
M28_RS07235	SSF81653	Calcium ATPase, transduction domain A
M28_RS07235	SSF81665	Calcium ATPase, transmembrane domain M
M28_RS07240	SSF46785	"Winged helix" DNA-binding domain
M28_RS07245	SSF53474	alpha/beta-Hydrolases
M28_RS07250	SSF89919	Ribosome-binding factor A, RbfA
M28_RS07255	SSF50447	Translation proteins
M28_RS07255	SSF52156	Initiation factor IF2/eIF5b, domain 3
M28_RS07255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07260	SSF55315	L30e-like
M28_RS07265	SSF64376	YlxR-like
M28_RS07270	SSF50249	Nucleic acid-binding proteins
M28_RS07270	SSF54814	Prokaryotic type KH domain (KH-domain type II)
M28_RS07270	SSF69705	Transcription factor NusA, N-terminal domain
M28_RS07275	SSF74942	YhbC-like, C-terminal domain
M28_RS07275	SSF75420	YhbC-like, N-terminal domain
M28_RS07285	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS07290	SSF56112	Protein kinase-like (PK-like)
M28_RS07300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07305	SSF54197	HIT-like
M28_RS07320	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS07325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07335	SSF56784	HAD-like
M28_RS07340	SSF52728	PTS IIb component
M28_RS07340	SSF53062	PTS system fructose IIA component-like
M28_RS07360	SSF46589	tRNA-binding arm
M28_RS07360	SSF55681	Class II aaRS and biotin synthetases
M28_RS07365	SSF52096	ClpP/crotonase
M28_RS07370	SSF52096	ClpP/crotonase
M28_RS07375	SSF51246	Rudiment single hybrid motif
M28_RS07375	SSF52440	PreATP-grasp domain
M28_RS07375	SSF56059	Glutathione synthetase ATP-binding domain-like
M28_RS07380	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
M28_RS07385	SSF51230	Single hybrid motif
M28_RS07390	SSF53901	Thiolase-like
M28_RS07395	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS07400	SSF52151	FabD/lysophospholipase-like
M28_RS07400	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
M28_RS07405	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
M28_RS07410	SSF47336	ACP-like
M28_RS07415	SSF53901	Thiolase-like
M28_RS07420	SSF46785	"Winged helix" DNA-binding domain
M28_RS07425	SSF52096	ClpP/crotonase
M28_RS07430	SSF46565	Chaperone J-domain
M28_RS07430	SSF49493	HSP40/DnaJ peptide-binding domain
M28_RS07430	SSF57938	DnaJ/Hsp40 cysteine-rich domain
M28_RS07435	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
M28_RS07435	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
M28_RS07435	SSF53067	Actin-like ATPase domain
M28_RS07440	SSF51064	Head domain of nucleotide exchange factor GrpE
M28_RS07440	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
M28_RS07445	SSF46785	"Winged helix" DNA-binding domain
M28_RS07445	SSF55781	GAF domain-like
M28_RS07455	SSF55166	Hedgehog/DD-peptidase
M28_RS07460	SSF53254	Phosphoglycerate mutase-like
M28_RS07475	SSF55931	Glutamine synthetase/guanido kinase
M28_RS07475	SSF89095	GatB/YqeY motif
M28_RS07480	SSF75304	Amidase signature (AS) enzymes
M28_RS07485	SSF141000	Glu-tRNAGln amidotransferase C subunit
M28_RS07490	SSF51621	Phosphoenolpyruvate/pyruvate domain
M28_RS07495	SSF52499	Isochorismatase-like hydrolases
M28_RS07500	SSF46785	"Winged helix" DNA-binding domain
M28_RS07505	SSF53383	PLP-dependent transferases
M28_RS07510	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS07515	SSF56784	HAD-like
M28_RS07520	SSF53774	Glutaminase/Asparaginase
M28_RS07535	SSF50249	Nucleic acid-binding proteins
M28_RS07535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07555	SSF90123	ABC transporter transmembrane region
M28_RS07560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07560	SSF90123	ABC transporter transmembrane region
M28_RS07565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07570	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
M28_RS07575	SSF53807	"Helical backbone" metal receptor
M28_RS07585	SSF158911	NEAT domain-like
M28_RS07585	SSF52058	L domain-like
M28_RS07590	SSF54001	Cysteine proteinases
M28_RS07595	SSF50621	Alanine racemase C-terminal domain-like
M28_RS07595	SSF51419	PLP-binding barrel
M28_RS07600	SSF56214	4'-phosphopantetheinyl transferase
M28_RS07605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07605	SSF81767	Pre-protein crosslinking domain of SecA
M28_RS07605	SSF81886	Helical scaffold and wing domains of SecA
M28_RS07610	SSF51182	RmlC-like cupins
M28_RS07615	SSF53067	Actin-like ATPase domain
M28_RS07620	SSF51445	(Trans)glycosidases
M28_RS07625	SSF51261	Duplicated hybrid motif
M28_RS07625	SSF55604	Glucose permease domain IIB
M28_RS07630	SSF49899	Concanavalin A-like lectins/glucanases
M28_RS07630	SSF75005	Arabinanase/levansucrase/invertase
M28_RS07635	SSF47413	lambda repressor-like DNA-binding domains
M28_RS07635	SSF53822	Periplasmic binding protein-like I
M28_RS07640	SSF48013	NusB-like
M28_RS07650	SSF50104	Translation proteins SH3-like domain
M28_RS07650	SSF50249	Nucleic acid-binding proteins
M28_RS07655	SSF53927	Cytidine deaminase-like
M28_RS07660	SSF53092	Creatinase/prolidase N-terminal domain
M28_RS07660	SSF55920	Creatinase/aminopeptidase
M28_RS07665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07670	SSF143865	CorA soluble domain-like
M28_RS07670	SSF144083	Magnesium transport protein CorA, transmembrane region
M28_RS07680	SSF46911	Ribosomal protein S18
M28_RS07685	SSF50249	Nucleic acid-binding proteins
M28_RS07690	SSF54995	Ribosomal protein S6
M28_RS07700	SSF48150	DNA-glycosylase
M28_RS07700	SSF55811	Nudix
M28_RS07710	SSF52833	Thioredoxin-like
M28_RS07715	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
M28_RS07720	SSF160443	SMR domain-like
M28_RS07720	SSF48334	DNA repair protein MutS, domain III
M28_RS07720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07735	SSF53098	Ribonuclease H-like
M28_RS07740	SSF51306	LexA/Signal peptidase
M28_RS07745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07755	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
M28_RS07755	SSF56672	DNA/RNA polymerases
M28_RS07760	SSF51998	PFL-like glycyl radical enzymes
M28_RS07765	SSF56601	beta-lactamase/transpeptidase-like
M28_RS07770	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
M28_RS07780	SSF81338	Aquaporin-like
M28_RS07785	SSF103473	MFS general substrate transporter
M28_RS07790	SSF46785	"Winged helix" DNA-binding domain
M28_RS07790	SSF51206	cAMP-binding domain-like
M28_RS07795	SSF49785	Galactose-binding domain-like
M28_RS07795	SSF53474	alpha/beta-Hydrolases
M28_RS07795	SSF81761	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
M28_RS07800	SSF47413	lambda repressor-like DNA-binding domains
M28_RS07805	SSF47413	lambda repressor-like DNA-binding domains
M28_RS07810	SSF82607	YbaB-like
M28_RS07815	SSF46955	Putative DNA-binding domain
M28_RS07815	SSF48695	Multiheme cytochromes
M28_RS07820	SSF53098	Ribonuclease H-like
M28_RS07850	SSF160996	HI0933 insert domain-like
M28_RS07850	SSF51905	FAD/NAD(P)-binding domain
M28_RS07855	SSF51569	Aldolase
M28_RS07865	SSF53167	Purine and uridine phosphorylases
M28_RS07870	SSF46785	"Winged helix" DNA-binding domain
M28_RS07870	SSF64288	Chorismate lyase-like
M28_RS07875	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
M28_RS07880	SSF53067	Actin-like ATPase domain
M28_RS07885	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS07890	SSF53067	Actin-like ATPase domain
M28_RS07900	SSF56281	Metallo-hydrolase/oxidoreductase
M28_RS07905	SSF54368	Glutamine synthetase, N-terminal domain
M28_RS07905	SSF55931	Glutamine synthetase/guanido kinase
M28_RS07910	SSF46955	Putative DNA-binding domain
M28_RS07920	SSF53748	Phosphoglycerate kinase
M28_RS07925	SSF56784	HAD-like
M28_RS07935	SSF101473	DhaL-like
M28_RS07945	SSF143800	L28p-like
M28_RS07950	SSF51569	Aldolase
M28_RS07960	SSF53474	alpha/beta-Hydrolases
M28_RS07965	SSF52317	Class I glutamine amidotransferase-like
M28_RS07965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS07975	SSF102735	Trigger factor ribosome-binding domain
M28_RS07975	SSF109998	Triger factor/SurA peptide-binding domain-like
M28_RS07975	SSF54534	FKBP-like
M28_RS07980	SSF50182	Sm-like ribonucleoproteins
M28_RS07980	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
M28_RS07980	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
M28_RS07985	SSF110710	TTHA0583/YokD-like
M28_RS07995	SSF53613	Ribokinase-like
M28_RS08000	SSF55120	Pseudouridine synthase
M28_RS08040	SSF110738	Glycerate kinase I
M28_RS08045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08050	SSF116734	DNA methylase specificity domain
M28_RS08055	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS08065	SSF46894	C-terminal effector domain of the bipartite response regulators
M28_RS08065	SSF52172	CheY-like
M28_RS08070	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS08080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08100	SSF51445	(Trans)glycosidases
M28_RS08105	SSF52794	PTS system IIB component-like
M28_RS08110	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
M28_RS08115	SSF51569	Aldolase
M28_RS08120	SSF53613	Ribokinase-like
M28_RS08125	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
M28_RS08130	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
M28_RS08135	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS08135	SSF46785	"Winged helix" DNA-binding domain
M28_RS08150	SSF56349	DNA breaking-rejoining enzymes
M28_RS08155	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS08160	SSF52161	Ribosomal protein L13
M28_RS08165	SSF47413	lambda repressor-like DNA-binding domains
M28_RS08175	SSF82549	DAK1/DegV-like
M28_RS08185	SSF55315	L30e-like
M28_RS08185	SSF75217	alpha/beta knot
M28_RS08195	SSF69065	RNase III domain-like
M28_RS08200	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
M28_RS08200	SSF52374	Nucleotidylyl transferase
M28_RS08210	SSF51161	Trimeric LpxA-like enzymes
M28_RS08220	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
M28_RS08220	SSF50249	Nucleic acid-binding proteins
M28_RS08220	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS08220	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
M28_RS08220	SSF55666	Ribonuclease PH domain 2-like
M28_RS08225	SSF51569	Aldolase
M28_RS08235	SSF52794	PTS system IIB component-like
M28_RS08240	SSF52794	PTS system IIB component-like
M28_RS08240	SSF55804	Phoshotransferase/anion transport protein
M28_RS08240	SSF63520	PTS-regulatory domain, PRD
M28_RS08245	SSF47060	S15/NS1 RNA-binding domain
M28_RS08255	SSF56420	Peptide deformylase
M28_RS08260	SSF52218	Flavoproteins
M28_RS08265	SSF46785	"Winged helix" DNA-binding domain
M28_RS08270	SSF50249	Nucleic acid-binding proteins
M28_RS08270	SSF53098	Ribonuclease H-like
M28_RS08270	SSF89550	PHP domain-like
M28_RS08275	SSF52954	Class II aaRS ABD-related
M28_RS08275	SSF55681	Class II aaRS and biotin synthetases
M28_RS08275	SSF55826	YbaK/ProRS associated domain
M28_RS08280	SSF50156	PDZ domain-like
M28_RS08290	SSF64005	Undecaprenyl diphosphate synthase
M28_RS08300	SSF52833	Thioredoxin-like
M28_RS08305	SSF49452	Starch-binding domain-like
M28_RS08305	SSF51445	(Trans)glycosidases
M28_RS08305	SSF81296	E set domains
M28_RS08310	SSF51011	Glycosyl hydrolase domain
M28_RS08310	SSF51445	(Trans)glycosidases
M28_RS08315	SSF50331	MOP-like
M28_RS08315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08320	SSF46689	Homeodomain-like
M28_RS08325	SSF54328	Staphylokinase/streptokinase
M28_RS08330	SSF69500	DTD-like
M28_RS08335	SSF109604	HD-domain/PDEase-like
M28_RS08335	SSF55021	ACT-like
M28_RS08335	SSF81271	TGS-like
M28_RS08335	SSF81301	Nucleotidyltransferase
M28_RS08345	SSF52218	Flavoproteins
M28_RS08350	SSF56219	DNase I-like
M28_RS08355	SSF51261	Duplicated hybrid motif
M28_RS08355	SSF55604	Glucose permease domain IIB
M28_RS08360	SSF75217	alpha/beta knot
M28_RS08360	SSF88697	PUA domain-like
M28_RS08365	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
M28_RS08375	SSF56322	ADC synthase
M28_RS08375	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
M28_RS08380	SSF52317	Class I glutamine amidotransferase-like
M28_RS08385	SSF48019	post-AAA+ oligomerization domain-like
M28_RS08385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08395	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS08400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08405	SSF50203	Bacterial enterotoxins
M28_RS08405	SSF54334	Superantigen toxins, C-terminal domain
M28_RS08410	SSF53850	Periplasmic binding protein-like II
M28_RS08415	SSF161098	MetI-like
M28_RS08420	SSF161098	MetI-like
M28_RS08425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08435	SSF69047	Hypothetical protein YjbJ
M28_RS08440	SSF142887	PhtA domain-like
M28_RS08445	SSF53807	"Helical backbone" metal receptor
M28_RS08460	SSF52025	PA domain
M28_RS08460	SSF52743	Subtilisin-like
M28_RS08490	SSF54001	Cysteine proteinases
M28_RS08495	SSF47384	Homodimeric domain of signal transducing histidine kinase
M28_RS08495	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS08500	SSF52172	CheY-like
M28_RS08510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08530	SSF101094	Staphylocoagulase
M28_RS08535	SSF53300	vWA-like
M28_RS08545	SSF109998	Triger factor/SurA peptide-binding domain-like
M28_RS08545	SSF54534	FKBP-like
M28_RS08550	SSF54001	Cysteine proteinases
M28_RS08555	SSF54001	Cysteine proteinases
M28_RS08560	SSF47413	lambda repressor-like DNA-binding domains
M28_RS08570	SSF101307	YutG-like
M28_RS08575	SSF56796	Dehydroquinate synthase-like
M28_RS08580	SSF51569	Aldolase
M28_RS08585	SSF51998	PFL-like glycyl radical enzymes
M28_RS08595	SSF52794	PTS system IIB component-like
M28_RS08600	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
M28_RS08605	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS08610	SSF100950	NagB/RpiA/CoA transferase-like
M28_RS08610	SSF46785	"Winged helix" DNA-binding domain
M28_RS08615	SSF102114	Radical SAM enzymes
M28_RS08625	SSF53955	Lysozyme-like
M28_RS08625	SSF56601	beta-lactamase/transpeptidase-like
M28_RS08630	SSF55298	YjgF-like
M28_RS08640	SSF55120	Pseudouridine synthase
M28_RS08655	SSF47413	lambda repressor-like DNA-binding domains
M28_RS08660	SSF48592	GroEL equatorial domain-like
M28_RS08660	SSF52029	GroEL apical domain-like
M28_RS08660	SSF54849	GroEL-intermediate domain like
M28_RS08665	SSF50129	GroES-like
M28_RS08670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08670	SSF81923	Double Clp-N motif
M28_RS08680	SSF50249	Nucleic acid-binding proteins
M28_RS08690	SSF52833	Thioredoxin-like
M28_RS08695	SSF51905	FAD/NAD(P)-binding domain
M28_RS08695	SSF52833	Thioredoxin-like
M28_RS08700	SSF51338	Composite domain of metallo-dependent hydrolases
M28_RS08700	SSF51556	Metallo-dependent hydrolases
M28_RS08705	SSF111326	Urocanase
M28_RS08710	SSF55116	Formiminotransferase domain of formiminotransferase-cyclodeaminase.
M28_RS08715	SSF101262	Methenyltetrahydrofolate cyclohydrolase-like
M28_RS08720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08725	SSF51182	RmlC-like cupins
M28_RS08735	SSF48557	L-aspartase-like
M28_RS08740	SSF52768	Arginase/deacetylase
M28_RS08745	SSF48452	TPR-like
M28_RS08745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08750	SSF52313	Ribosomal protein S2
M28_RS08755	SSF46934	UBA-like
M28_RS08755	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
M28_RS08760	SSF55486	Metalloproteases ("zincins"), catalytic domain
M28_RS08765	SSF51011	Glycosyl hydrolase domain
M28_RS08765	SSF51445	(Trans)glycosidases
M28_RS08770	SSF51261	Duplicated hybrid motif
M28_RS08770	SSF55604	Glucose permease domain IIB
M28_RS08775	SSF46785	"Winged helix" DNA-binding domain
M28_RS08775	SSF64288	Chorismate lyase-like
M28_RS08785	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
M28_RS08795	SSF102114	Radical SAM enzymes
M28_RS08800	SSF55729	Acyl-CoA N-acyltransferases (Nat)
M28_RS08805	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS08805	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
M28_RS08810	SSF51998	PFL-like glycyl radical enzymes
M28_RS08825	SSF53098	Ribonuclease H-like
M28_RS08835	SSF52833	Thioredoxin-like
M28_RS08840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08840	SSF54752	RecA protein, C-terminal domain
M28_RS08845	SSF142433	CinA-like
M28_RS08845	SSF53218	Molybdenum cofactor biosynthesis proteins
M28_RS08850	SSF48150	DNA-glycosylase
M28_RS08855	SSF46929	DNA helicase RuvA subunit, C-terminal domain
M28_RS08855	SSF47781	RuvA domain 2-like
M28_RS08855	SSF50249	Nucleic acid-binding proteins
M28_RS08860	SSF103473	MFS general substrate transporter
M28_RS08865	SSF118116	DNA mismatch repair protein MutL
M28_RS08865	SSF54211	Ribosomal protein S5 domain 2-like
M28_RS08865	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
M28_RS08870	SSF56349	DNA breaking-rejoining enzymes
M28_RS08875	SSF47413	lambda repressor-like DNA-binding domains
M28_RS08875	SSF51306	LexA/Signal peptidase
M28_RS08880	SSF47413	lambda repressor-like DNA-binding domains
M28_RS08885	SSF47413	lambda repressor-like DNA-binding domains
M28_RS08905	SSF47598	Ribbon-helix-helix
M28_RS08930	SSF46955	Putative DNA-binding domain
M28_RS08970	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
M28_RS08985	SSF48334	DNA repair protein MutS, domain III
M28_RS08985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS08985	SSF53150	DNA repair protein MutS, domain II
M28_RS08985	SSF55271	DNA repair protein MutS, domain I
M28_RS08990	SSF158622	YheA/YmcA-like
M28_RS08995	SSF46785	"Winged helix" DNA-binding domain
M28_RS08995	SSF55252	C-terminal domain of arginine repressor
M28_RS09000	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
M28_RS09000	SSF52374	Nucleotidylyl transferase
M28_RS09000	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
M28_RS09005	SSF109797	Bacteriocin immunity protein-like
M28_RS09025	SSF50249	Nucleic acid-binding proteins
M28_RS09025	SSF55261	GAD domain-like
M28_RS09025	SSF55681	Class II aaRS and biotin synthetases
M28_RS09030	SSF52954	Class II aaRS ABD-related
M28_RS09030	SSF55681	Class II aaRS and biotin synthetases
M28_RS09035	SSF57829	Zn-binding ribosomal proteins
M28_RS09040	SSF57829	Zn-binding ribosomal proteins
M28_RS09050	SSF46785	"Winged helix" DNA-binding domain
M28_RS09055	SSF47413	lambda repressor-like DNA-binding domains
M28_RS09060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS09080	SSF55811	Nudix
M28_RS09085	SSF46785	"Winged helix" DNA-binding domain
M28_RS09105	SSF46689	Homeodomain-like
M28_RS09110	SSF143011	RelE-like
M28_RS09125	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
M28_RS09185	SSF46955	Putative DNA-binding domain
M28_RS09215	SSF47413	lambda repressor-like DNA-binding domains
M28_RS09220	SSF47413	lambda repressor-like DNA-binding domains
M28_RS09225	SSF56349	DNA breaking-rejoining enzymes
M28_RS09230	SSF55174	Alpha-L RNA-binding motif
M28_RS09240	SSF48024	N-terminal domain of DnaB helicase
M28_RS09240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS09245	SSF55653	Ribosomal protein L9 C-domain
M28_RS09245	SSF55658	L9 N-domain-like
M28_RS09250	SSF64182	DHH phosphoesterases
M28_RS09255	SSF51905	FAD/NAD(P)-binding domain
M28_RS09260	SSF55811	Nudix
M28_RS09265	SSF52402	Adenine nucleotide alpha hydrolases-like
M28_RS09270	SSF143548	Serine metabolism enzymes domain
M28_RS09270	SSF55021	ACT-like
M28_RS09280	SSF53955	Lysozyme-like
M28_RS09290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS09295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS09310	SSF63411	LuxS/MPP-like metallohydrolase
M28_RS09315	SSF63411	LuxS/MPP-like metallohydrolase
M28_RS09325	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
M28_RS09325	SSF51735	NAD(P)-binding Rossmann-fold domains
M28_RS09325	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
M28_RS09330	SSF53448	Nucleotide-diphospho-sugar transferases
M28_RS09335	SSF55174	Alpha-L RNA-binding motif
M28_RS09340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS09345	SSF103481	Multidrug resistance efflux transporter EmrE
M28_RS09350	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
M28_RS09350	SSF54631	CBS-domain pair
M28_RS09355	SSF52374	Nucleotidylyl transferase
M28_RS09365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
M28_RS09395	SSF75217	alpha/beta knot
M28_RS09400	SSF50156	PDZ domain-like
M28_RS09400	SSF50494	Trypsin-like serine proteases
M28_RS09405	SSF109709	KorB DNA-binding domain-like
M28_RS09405	SSF110849	ParB/Sulfiredoxin