locus-tag class description M28_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal M28_RS00005 IPR003593 AAA+ ATPase domain M28_RS00005 IPR001957 Chromosomal replication control, initiator DnaA M28_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like M28_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site M28_RS00005 IPR013317 Chromosomal replication initiator protein DnaA M28_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00005 IPR010921 Trp repressor/replication initiator M28_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal M28_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central M28_RS00010 IPR001001 DNA polymerase III, beta sliding clamp M28_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal M28_RS00020 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 M28_RS00020 IPR006073 GTP binding domain M28_RS00020 IPR031167 OBG-type guanine nucleotide-binding (G) domain M28_RS00020 IPR012675 Beta-grasp domain superfamily M28_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00020 IPR004095 TGS M28_RS00020 IPR012676 TGS-like M28_RS00020 IPR023192 TGS-like domain superfamily M28_RS00020 IPR013029 YchF, C-terminal domain M28_RS00020 IPR041706 YchF, N-terminal M28_RS00025 IPR001328 Peptidyl-tRNA hydrolase M28_RS00025 IPR018171 Peptidyl-tRNA hydrolase, conserved site M28_RS00025 IPR036416 Peptidyl-tRNA hydrolase superfamily M28_RS00030 IPR011545 DEAD/DEAH box helicase domain M28_RS00030 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS00030 IPR041471 UvrB, interaction domain M28_RS00030 IPR001650 Helicase, C-terminal M28_RS00030 IPR005118 Transcription-repair-coupling factor, C-terminal domain M28_RS00030 IPR003711 CarD-like/TRCF domain M28_RS00030 IPR037235 TRCF-like, C-terminal domain M28_RS00030 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00030 IPR004576 Transcription-repair coupling factor M28_RS00030 IPR036101 CarD-like/TRCF domain superfamily M28_RS00035 IPR025490 RNA-binding protein, HP1423 type M28_RS00035 IPR002942 RNA-binding S4 domain M28_RS00035 IPR036986 RNA-binding S4 domain superfamily M28_RS00050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS00050 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal M28_RS00050 IPR012094 tRNA(Ile)-lysidine synthase M28_RS00050 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal M28_RS00050 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal M28_RS00055 IPR000836 Phosphoribosyltransferase domain M28_RS00055 IPR005904 Hypoxanthine phosphoribosyl transferase M28_RS00055 IPR029057 Phosphoribosyltransferase-like M28_RS00060 IPR000642 Peptidase M41 M28_RS00060 IPR011546 Peptidase M41, FtsH extracellular M28_RS00060 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00060 IPR005936 Peptidase, FtsH M28_RS00060 IPR003959 ATPase, AAA-type, core M28_RS00060 IPR003593 AAA+ ATPase domain M28_RS00060 IPR003960 ATPase, AAA-type, conserved site M28_RS00060 IPR041569 AAA ATPase, AAA+ lid domain M28_RS00060 IPR037219 Peptidase M41-like M28_RS00065 IPR002293 Amino acid/polyamine transporter I M28_RS00245 IPR038765 Papain-like cysteine peptidase superfamily M28_RS00245 IPR036779 LysM domain superfamily M28_RS00245 IPR018392 LysM domain M28_RS00245 IPR007921 CHAP domain M28_RS00250 IPR000836 Phosphoribosyltransferase domain M28_RS00250 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site M28_RS00250 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type M28_RS00250 IPR005946 Ribose-phosphate pyrophosphokinase M28_RS00250 IPR029057 Phosphoribosyltransferase-like M28_RS00250 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain M28_RS00255 IPR012340 Nucleic acid-binding, OB-fold M28_RS00255 IPR022572 DNA replication/recombination mediator RecO, N-terminal M28_RS00255 IPR037278 ARFGAP/RecO-like zinc finger M28_RS00255 IPR042242 Recombination protein O, zinc-binding domain M28_RS00255 IPR003717 Recombination protein O, RecO M28_RS00260 IPR012281 Phospholipid biosynthesis protein, PlsX-like M28_RS00260 IPR003664 Fatty acid synthesis PlsX protein M28_RS00265 IPR036736 ACP-like superfamily M28_RS00265 IPR003231 Acyl carrier protein (ACP) M28_RS00265 IPR009081 Phosphopantetheine binding ACP domain M28_RS00270 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase M28_RS00270 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase M28_RS00270 IPR028923 SAICAR synthetase/ADE2, N-terminal M28_RS00270 IPR018236 SAICAR synthetase, conserved site M28_RS00275 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain M28_RS00275 IPR010918 PurM-like, C-terminal domain M28_RS00275 IPR036676 PurM-like, C-terminal domain superfamily M28_RS00275 IPR016188 PurM-like, N-terminal domain M28_RS00275 IPR036921 PurM-like, N-terminal domain superfamily M28_RS00275 IPR010074 Phosphoribosylformylglycinamidine subunit PurL M28_RS00280 IPR035584 Amidophosphoribosyltransferase, N-terminal M28_RS00280 IPR017932 Glutamine amidotransferase type 2 domain M28_RS00280 IPR029055 Nucleophile aminohydrolases, N-terminal M28_RS00280 IPR000836 Phosphoribosyltransferase domain M28_RS00280 IPR029057 Phosphoribosyltransferase-like M28_RS00280 IPR005854 Amidophosphoribosyltransferase M28_RS00285 IPR036921 PurM-like, N-terminal domain superfamily M28_RS00285 IPR036676 PurM-like, C-terminal domain superfamily M28_RS00285 IPR016188 PurM-like, N-terminal domain M28_RS00285 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase M28_RS00285 IPR010918 PurM-like, C-terminal domain M28_RS00290 IPR004607 Phosphoribosylglycinamide formyltransferase M28_RS00290 IPR002376 Formyl transferase, N-terminal M28_RS00290 IPR001555 Phosphoribosylglycinamide formyltransferase, active site M28_RS00290 IPR036477 Formyl transferase, N-terminal domain superfamily M28_RS00295 IPR002695 Bifunctional purine biosynthesis protein PurH-like M28_RS00295 IPR016193 Cytidine deaminase-like M28_RS00295 IPR011607 Methylglyoxal synthase-like domain M28_RS00295 IPR024051 AICAR transformylase, duplicated domain superfamily M28_RS00295 IPR036914 Methylglyoxal synthase-like domain superfamily M28_RS00305 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal M28_RS00305 IPR000115 Phosphoribosylglycinamide synthetase M28_RS00305 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M28_RS00305 IPR020559 Phosphoribosylglycinamide synthetase, conserved site M28_RS00305 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily M28_RS00305 IPR020560 Phosphoribosylglycinamide synthetase, C-domain M28_RS00305 IPR011761 ATP-grasp fold M28_RS00305 IPR011054 Rudiment single hybrid motif M28_RS00305 IPR013815 ATP-grasp fold, subdomain 1 M28_RS00305 IPR016185 Pre-ATP-grasp domain superfamily M28_RS00310 IPR033747 Class I PurE M28_RS00310 IPR000031 PurE domain M28_RS00310 IPR024694 PurE, prokaryotic type M28_RS00310 IPR035893 PurE domain superfamily M28_RS00315 IPR011054 Rudiment single hybrid motif M28_RS00315 IPR016185 Pre-ATP-grasp domain superfamily M28_RS00315 IPR013815 ATP-grasp fold, subdomain 1 M28_RS00315 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit M28_RS00315 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M28_RS00315 IPR011761 ATP-grasp fold M28_RS00315 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain M28_RS00325 IPR004769 Adenylosuccinate lyase M28_RS00325 IPR008948 L-Aspartase-like M28_RS00325 IPR022761 Fumarate lyase, N-terminal M28_RS00325 IPR000362 Fumarate lyase family M28_RS00325 IPR020557 Fumarate lyase, conserved site M28_RS00325 IPR024083 Fumarase/histidase, N-terminal M28_RS00325 IPR019468 Adenylosuccinate lyase C-terminal M28_RS00335 IPR036390 Winged helix DNA-binding domain superfamily M28_RS00335 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS00335 IPR008823 RuvB C-terminal winged helix domain M28_RS00335 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00335 IPR004605 DNA helicase, Holliday junction RuvB-type M28_RS00335 IPR041445 RuvB, AAA lid domain M28_RS00335 IPR003593 AAA+ ATPase domain M28_RS00335 IPR008824 RuvB-like P-loop domain M28_RS00340 IPR017867 Protein-tyrosine phosphatase, low molecular weight M28_RS00340 IPR036196 Phosphotyrosine protein phosphatase I superfamily M28_RS00340 IPR023485 Phosphotyrosine protein phosphatase I M28_RS00350 IPR036514 SGNH hydrolase superfamily M28_RS00350 IPR002656 Acyltransferase 3 M28_RS00355 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain M28_RS00355 IPR016162 Aldehyde dehydrogenase, N-terminal M28_RS00355 IPR016163 Aldehyde dehydrogenase, C-terminal M28_RS00355 IPR016161 Aldehyde/histidinol dehydrogenase M28_RS00355 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M28_RS00355 IPR039697 Iron-type alcohol dehydrogenase-like M28_RS00355 IPR015590 Aldehyde dehydrogenase domain M28_RS00355 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M28_RS00355 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase M28_RS00360 IPR011032 GroES-like superfamily M28_RS00360 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M28_RS00360 IPR013149 Alcohol dehydrogenase, C-terminal M28_RS00360 IPR036291 NAD(P)-binding domain superfamily M28_RS00360 IPR020843 Polyketide synthase, enoylreductase domain M28_RS00360 IPR013154 Alcohol dehydrogenase, N-terminal M28_RS00365 IPR002528 Multi antimicrobial extrusion protein M28_RS00370 IPR018268 Ribosomal protein S10, conserved site M28_RS00370 IPR027486 Ribosomal protein S10 domain M28_RS00370 IPR036838 Ribosomal protein S10 domain superfamily M28_RS00370 IPR001848 Ribosomal protein S10 M28_RS00375 IPR019926 Ribosomal protein L3, conserved site M28_RS00375 IPR000597 Ribosomal protein L3 M28_RS00375 IPR019927 Ribosomal protein L3, bacterial/organelle-type M28_RS00375 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS00380 IPR023574 Ribosomal protein L4 domain superfamily M28_RS00380 IPR013005 50S ribosomal protein uL4 M28_RS00380 IPR002136 Ribosomal protein L4/L1e M28_RS00385 IPR001014 Ribosomal protein L23/L25, conserved site M28_RS00385 IPR012678 Ribosomal protein L23/L15e core domain superfamily M28_RS00385 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M28_RS00385 IPR013025 Ribosomal protein L25/L23 M28_RS00390 IPR012340 Nucleic acid-binding, OB-fold M28_RS00390 IPR022666 Ribosomal Proteins L2, RNA binding domain M28_RS00390 IPR014722 Ribosomal protein L2, domain 2 M28_RS00390 IPR002171 Ribosomal protein L2 M28_RS00390 IPR022669 Ribosomal protein L2, C-terminal M28_RS00390 IPR022671 Ribosomal protein L2, conserved site M28_RS00390 IPR014726 Ribosomal protein L2, domain 3 M28_RS00390 IPR005880 Ribosomal protein L2, bacterial/organellar-type M28_RS00390 IPR008991 Translation protein SH3-like domain superfamily M28_RS00395 IPR002222 Ribosomal protein S19/S15 M28_RS00395 IPR005732 Ribosomal protein S19, bacterial-type M28_RS00395 IPR020934 Ribosomal protein S19 conserved site M28_RS00395 IPR023575 Ribosomal protein S19, superfamily M28_RS00400 IPR001063 Ribosomal protein L22/L17 M28_RS00400 IPR018260 Ribosomal protein L22/L17, conserved site M28_RS00400 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type M28_RS00400 IPR036394 Ribosomal protein L22/L17 superfamily M28_RS00405 IPR018280 Ribosomal protein S3, conserved site M28_RS00405 IPR004044 K Homology domain, type 2 M28_RS00405 IPR009019 K homology domain superfamily, prokaryotic type M28_RS00405 IPR005704 Ribosomal protein S3, bacterial-type M28_RS00405 IPR001351 Ribosomal protein S3, C-terminal M28_RS00405 IPR036419 Ribosomal protein S3, C-terminal domain superfamily M28_RS00405 IPR004087 K Homology domain M28_RS00405 IPR015946 K homology domain-like, alpha/beta M28_RS00410 IPR016180 Ribosomal protein L10e/L16 M28_RS00410 IPR036920 Ribosomal protein L10e/L16 superfamily M28_RS00410 IPR000114 Ribosomal protein L16 M28_RS00410 IPR020798 Ribosomal protein L16, conserved site M28_RS00415 IPR001854 Ribosomal protein L29/L35 M28_RS00415 IPR036049 Ribosomal protein L29/L35 superfamily M28_RS00415 IPR018254 Ribosomal protein L29, conserved site M28_RS00420 IPR019984 30S ribosomal protein S17 M28_RS00420 IPR019979 Ribosomal protein S17, conserved site M28_RS00420 IPR000266 Ribosomal protein S17/S11 M28_RS00420 IPR012340 Nucleic acid-binding, OB-fold M28_RS00425 IPR019972 Ribosomal protein L14P, conserved site M28_RS00425 IPR005745 Ribosomal protein L14P, bacterial-type M28_RS00425 IPR000218 Ribosomal protein L14P M28_RS00425 IPR036853 Ribosomal protein L14 superfamily M28_RS00430 IPR005824 KOW M28_RS00430 IPR041988 Ribosomal Protein L26/L24, KOW domain M28_RS00430 IPR014722 Ribosomal protein L2, domain 2 M28_RS00430 IPR003256 Ribosomal protein L24 M28_RS00430 IPR005825 Ribosomal protein L24/L26, conserved site M28_RS00430 IPR008991 Translation protein SH3-like domain superfamily M28_RS00435 IPR020930 Ribosomal protein L5, bacterial-type M28_RS00435 IPR022803 Ribosomal protein L5 domain superfamily M28_RS00435 IPR020929 Ribosomal protein L5, conserved site M28_RS00435 IPR002132 Ribosomal protein L5 M28_RS00435 IPR031309 Ribosomal protein L5, C-terminal M28_RS00435 IPR031310 Ribosomal protein L5, N-terminal M28_RS00440 IPR001209 Ribosomal protein S14 M28_RS00440 IPR018271 Ribosomal protein S14, conserved site M28_RS00440 IPR023053 Ribosomal protein S14, type Z M28_RS00445 IPR000630 Ribosomal protein S8 M28_RS00445 IPR035987 Ribosomal protein S8 superfamily M28_RS00450 IPR002358 Ribosomal protein L6, conserved site M28_RS00450 IPR000702 Ribosomal protein L6 M28_RS00450 IPR020040 Ribosomal protein L6, alpha-beta domain M28_RS00450 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily M28_RS00450 IPR019906 Ribosomal protein L6, bacterial-type M28_RS00455 IPR004389 Ribosomal protein L18, bacterial-type M28_RS00455 IPR005484 Ribosomal protein L18 M28_RS00460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS00460 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS00460 IPR005324 Ribosomal protein S5, C-terminal M28_RS00460 IPR005712 Ribosomal protein S5, bacterial-type M28_RS00460 IPR000851 Ribosomal protein S5 M28_RS00460 IPR013810 Ribosomal protein S5, N-terminal M28_RS00460 IPR018192 Ribosomal protein S5, N-terminal, conserved site M28_RS00465 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain M28_RS00465 IPR005996 Ribosomal protein L30, bacterial-type M28_RS00465 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M28_RS00465 IPR018038 Ribosomal protein L30, conserved site M28_RS00470 IPR021131 Ribosomal protein L18e/L15P M28_RS00470 IPR036227 Ribosomal L18e/L15P superfamily M28_RS00470 IPR030878 Ribosomal protein L15 M28_RS00470 IPR005749 Ribosomal protein L15, bacterial-type M28_RS00470 IPR001196 Ribosomal protein L15, conserved site M28_RS00475 IPR026593 Protein translocase subunit SecY M28_RS00475 IPR002208 SecY/SEC61-alpha family M28_RS00475 IPR030659 SecY conserved site M28_RS00475 IPR023201 SecY domain superfamily M28_RS00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00480 IPR006259 Adenylate kinase subfamily M28_RS00480 IPR000850 Adenylate kinase/UMP-CMP kinase M28_RS00480 IPR033690 Adenylate kinase, conserved site M28_RS00485 IPR004368 Translation initiation factor IF-1 M28_RS00485 IPR022967 RNA-binding domain, S1 M28_RS00485 IPR006196 RNA-binding domain, S1, IF1 type M28_RS00485 IPR012340 Nucleic acid-binding, OB-fold M28_RS00490 IPR000473 Ribosomal protein L36 M28_RS00490 IPR035977 Ribosomal protein L36 superfamily M28_RS00495 IPR027437 30s ribosomal protein S13, C-terminal M28_RS00495 IPR001892 Ribosomal protein S13 M28_RS00495 IPR010979 Ribosomal protein S13-like, H2TH M28_RS00495 IPR019980 Ribosomal protein S13, bacterial-type M28_RS00495 IPR018269 Ribosomal protein S13, conserved site M28_RS00500 IPR001971 Ribosomal protein S11 M28_RS00500 IPR019981 Ribosomal protein S11, bacterial-type M28_RS00500 IPR018102 Ribosomal S11, conserved site M28_RS00500 IPR036967 Ribosomal protein S11 superfamily M28_RS00505 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type M28_RS00505 IPR011773 DNA-directed RNA polymerase, alpha subunit M28_RS00505 IPR036603 RNA polymerase, RBP11-like subunit M28_RS00505 IPR036643 DNA-directed RNA polymerase, insert domain superfamily M28_RS00505 IPR011262 DNA-directed RNA polymerase, insert domain M28_RS00505 IPR011260 RNA polymerase, alpha subunit, C-terminal M28_RS00510 IPR036373 Ribosomal protein L17 superfamily M28_RS00510 IPR000456 Ribosomal protein L17 M28_RS00600 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS00600 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase M28_RS00600 IPR006204 GHMP kinase N-terminal domain M28_RS00600 IPR036554 GHMP kinase, C-terminal domain superfamily M28_RS00600 IPR013750 GHMP kinase, C-terminal domain M28_RS00600 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS00605 IPR006204 GHMP kinase N-terminal domain M28_RS00605 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS00605 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase M28_RS00605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS00605 IPR036554 GHMP kinase, C-terminal domain superfamily M28_RS00605 IPR013750 GHMP kinase, C-terminal domain M28_RS00610 IPR013750 GHMP kinase, C-terminal domain M28_RS00610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS00610 IPR006204 GHMP kinase N-terminal domain M28_RS00610 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase M28_RS00610 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS00610 IPR036554 GHMP kinase, C-terminal domain superfamily M28_RS00615 IPR036390 Winged helix DNA-binding domain superfamily M28_RS00615 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS00615 IPR000835 MarR-type HTH domain M28_RS00615 IPR011991 ArsR-like helix-turn-helix domain M28_RS00620 IPR003593 AAA+ ATPase domain M28_RS00620 IPR003439 ABC transporter-like M28_RS00620 IPR017871 ABC transporter, conserved site M28_RS00620 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00625 IPR001626 ABC transporter, TroCD-like M28_RS00625 IPR037294 ABC transporter, BtuC-like M28_RS00635 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M28_RS00635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS00635 IPR002942 RNA-binding S4 domain M28_RS00635 IPR036986 RNA-binding S4 domain superfamily M28_RS00635 IPR002307 Tyrosine-tRNA ligase M28_RS00635 IPR024088 Tyrosine-tRNA ligase, bacterial-type M28_RS00635 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 M28_RS00635 IPR002305 Aminoacyl-tRNA synthetase, class Ic M28_RS00640 IPR001264 Glycosyl transferase, family 51 M28_RS00640 IPR012338 Beta-lactamase/transpeptidase-like M28_RS00640 IPR001460 Penicillin-binding protein, transpeptidase M28_RS00640 IPR036950 Penicillin binding protein transglycosylase domain M28_RS00640 IPR023346 Lysozyme-like domain superfamily M28_RS00645 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily M28_RS00645 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain M28_RS00645 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain M28_RS00645 IPR007641 RNA polymerase Rpb2, domain 7 M28_RS00645 IPR007644 RNA polymerase, beta subunit, protrusion M28_RS00645 IPR007121 RNA polymerase, beta subunit, conserved site M28_RS00645 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type M28_RS00645 IPR007645 RNA polymerase Rpb2, domain 3 M28_RS00645 IPR015712 DNA-directed RNA polymerase, subunit 2 M28_RS00645 IPR014724 RNA polymerase Rpb2, OB-fold M28_RS00645 IPR007642 RNA polymerase Rpb2, domain 2 M28_RS00645 IPR037034 RNA polymerase Rpb2, domain 2 superfamily M28_RS00650 IPR042102 RNA polymerase Rpb1, domain 3 superfamily M28_RS00650 IPR007080 RNA polymerase Rpb1, domain 1 M28_RS00650 IPR007081 RNA polymerase Rpb1, domain 5 M28_RS00650 IPR038120 RNA polymerase Rpb1, funnel domain superfamily M28_RS00650 IPR006592 RNA polymerase, N-terminal M28_RS00650 IPR000722 RNA polymerase, alpha subunit M28_RS00650 IPR012754 DNA-directed RNA polymerase, subunit beta-prime M28_RS00650 IPR007066 RNA polymerase Rpb1, domain 3 M28_RS00650 IPR007083 RNA polymerase Rpb1, domain 4 M28_RS00660 IPR001482 Type II/IV secretion system protein M28_RS00660 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00660 IPR003593 AAA+ ATPase domain M28_RS00665 IPR003004 GspF/PilC family M28_RS00665 IPR001992 Type II secretion system conserved site M28_RS00665 IPR018076 Type II secretion system F domain M28_RS00665 IPR042094 Type II secretion system F domain superfamily M28_RS00670 IPR016940 ComG operon protein C M28_RS00670 IPR012902 Prokaryotic N-terminal methylation site M28_RS00700 IPR004372 Acetate/propionate kinase M28_RS00700 IPR023865 Aliphatic acid kinase, short-chain, conserved site M28_RS00700 IPR000890 Aliphatic acid kinase, short-chain M28_RS00710 IPR036291 NAD(P)-binding domain superfamily M28_RS00710 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain M28_RS00710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M28_RS00710 IPR000304 Pyrroline-5-carboxylate reductase M28_RS00710 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal M28_RS00715 IPR008007 Peptidase M42 M28_RS00715 IPR023367 Peptidase M42, domain 2 M28_RS00715 IPR017538 Peptidase M42, glutamyl aminopeptidase M28_RS00730 IPR036249 Thioredoxin-like superfamily M28_RS00730 IPR013766 Thioredoxin domain M28_RS00735 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain M28_RS00735 IPR027855 Domain of unknown function DUF4479 M28_RS00735 IPR012340 Nucleic acid-binding, OB-fold M28_RS00735 IPR037154 YtpR-like superfamily M28_RS00735 IPR002547 tRNA-binding domain M28_RS00740 IPR012340 Nucleic acid-binding, OB-fold M28_RS00740 IPR000424 Primosome PriB/single-strand DNA-binding M28_RS00740 IPR011344 Single-stranded DNA-binding protein M28_RS00745 IPR031314 Deoxynucleoside kinase domain M28_RS00745 IPR002624 Deoxynucleoside kinase M28_RS00745 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00750 IPR018517 tRNA-dihydrouridine synthase, conserved site M28_RS00750 IPR001269 tRNA-dihydrouridine synthase M28_RS00750 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal M28_RS00750 IPR035587 DUS-like, FMN-binding domain M28_RS00750 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 M28_RS00750 IPR013785 Aldolase-type TIM barrel M28_RS00755 IPR000397 Heat shock protein Hsp33 M28_RS00755 IPR016153 Heat shock protein Hsp33, N-terminal M28_RS00755 IPR016154 Heat shock protein Hsp33, C-terminal M28_RS00770 IPR013552 Thioester domain M28_RS00770 IPR013783 Immunoglobulin-like fold M28_RS00770 IPR023849 Uncharacterised domain CHP03934, TQXA M28_RS00770 IPR041033 Prealbumin-like fold domain M28_RS00780 IPR013783 Immunoglobulin-like fold M28_RS00780 IPR023849 Uncharacterised domain CHP03934, TQXA M28_RS00780 IPR013552 Thioester domain M28_RS00780 IPR041033 Prealbumin-like fold domain M28_RS00795 IPR005754 Sortase family M28_RS00795 IPR015986 Sortase B, Firmicutes M28_RS00795 IPR023365 Sortase domain superfamily M28_RS00795 IPR009835 Sortase B family M28_RS00820 IPR006160 Short chain fatty acid transporter AtoE M28_RS00820 IPR006161 Conserved hypothetical protein CHP00336 M28_RS00830 IPR020616 Thiolase, N-terminal M28_RS00830 IPR020613 Thiolase, conserved site M28_RS00830 IPR020617 Thiolase, C-terminal M28_RS00830 IPR020610 Thiolase, active site M28_RS00830 IPR016039 Thiolase-like M28_RS00830 IPR002155 Thiolase M28_RS00830 IPR020615 Thiolase, acyl-enzyme intermediate active site M28_RS00835 IPR004163 Coenzyme A transferase binding site M28_RS00835 IPR012792 3-oxoacid CoA-transferase, subunit A M28_RS00835 IPR004165 Coenzyme A transferase family I M28_RS00835 IPR037171 NagB/RpiA transferase-like M28_RS00840 IPR037171 NagB/RpiA transferase-like M28_RS00840 IPR004164 Coenzyme A transferase active site M28_RS00840 IPR004165 Coenzyme A transferase family I M28_RS00840 IPR012791 3-oxoacid CoA-transferase, subunit B M28_RS00850 IPR006056 RidA family M28_RS00850 IPR019897 RidA, conserved site M28_RS00850 IPR035959 RutC-like superfamily M28_RS00850 IPR006175 YjgF/YER057c/UK114 family M28_RS00865 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family M28_RS00870 IPR000245 V-ATPase proteolipid subunit M28_RS00870 IPR002379 V-ATPase proteolipid subunit C-like domain M28_RS00870 IPR035921 F/V-ATP synthase subunit C superfamily M28_RS00880 IPR035067 V-type ATPase subunit c M28_RS00880 IPR002843 ATPase, V0 complex, c/d subunit M28_RS00880 IPR036079 V-type ATP synthase subunit C-like M28_RS00885 IPR008218 ATPase, V1 complex, subunit F M28_RS00885 IPR036906 ATPase, V1 complex, subunit F superfamily M28_RS00885 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal M28_RS00890 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M28_RS00890 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal M28_RS00890 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M28_RS00890 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension M28_RS00890 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00890 IPR022878 V-type ATP synthase catalytic alpha chain M28_RS00890 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M28_RS00890 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M28_RS00890 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M28_RS00895 IPR022879 V-type ATP synthase regulatory subunit B/beta M28_RS00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00895 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M28_RS00895 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M28_RS00895 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M28_RS00900 IPR002699 ATPase, V1 complex, subunit D M28_RS00915 IPR018220 Adenylosuccinate synthase, GTP-binding site M28_RS00915 IPR033128 Adenylosuccinate synthase, active site M28_RS00915 IPR042109 Adenylosuccinate synthetase, domain 1 M28_RS00915 IPR042110 Adenylosuccinate synthetase, domain 2 M28_RS00915 IPR042111 Adenylosuccinate synthetase, domain 3 M28_RS00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS00915 IPR001114 Adenylosuccinate synthetase M28_RS00920 IPR003760 ABC transporter substrate-binding protein PnrA-like M28_RS00920 IPR028082 Periplasmic binding protein-like I M28_RS00925 IPR036735 NusG, N-terminal domain superfamily M28_RS00925 IPR006645 NusG, N-terminal M28_RS00925 IPR014722 Ribosomal protein L2, domain 2 M28_RS00925 IPR005824 KOW M28_RS00925 IPR001062 Transcription antitermination protein, NusG M28_RS00925 IPR008991 Translation protein SH3-like domain superfamily M28_RS00940 IPR036359 Thiol-activated cytolysin superfamily M28_RS00940 IPR001869 Thiol-activated cytolysin M28_RS00940 IPR035390 Thiol-activated cytolysin C-terminal M28_RS00940 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily M28_RS00940 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily M28_RS00965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS00965 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M28_RS00965 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS00965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS00970 IPR002302 Leucine-tRNA ligase M28_RS00970 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M28_RS00970 IPR025709 Leucyl-tRNA synthetase, editing domain M28_RS00970 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M28_RS00970 IPR015413 Methionyl/Leucyl tRNA synthetase M28_RS00970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS00970 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M28_RS00970 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M28_RS00970 IPR002300 Aminoacyl-tRNA synthetase, class Ia M28_RS00975 IPR004703 Phosphotransferase system, sugar-specific permease component M28_RS00980 IPR013011 Phosphotransferase system, EIIB component, type 2 M28_RS00980 IPR036095 PTS system IIB component-like superfamily M28_RS00980 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS00985 IPR016152 Phosphotransferase/anion transporter M28_RS00985 IPR002178 PTS EIIA type-2 domain M28_RS00990 IPR011060 Ribulose-phosphate binding barrel M28_RS00990 IPR001754 Orotidine 5'-phosphate decarboxylase domain M28_RS00990 IPR041710 HPS/KGPDC domain M28_RS00990 IPR013785 Aldolase-type TIM barrel M28_RS00990 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD M28_RS00995 IPR036237 Xylose isomerase-like superfamily M28_RS00995 IPR001719 AP endonuclease 2 M28_RS00995 IPR013022 Xylose isomerase-like, TIM barrel domain M28_RS00995 IPR004560 L-ribulose-5-phosphate 3-epimerase M28_RS01000 IPR004661 L-ribulose-5-phosphate 4-epimerase M28_RS01000 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M28_RS01000 IPR001303 Class II aldolase/adducin N-terminal M28_RS01015 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS01015 IPR023951 L-ascorbate-6-phosphate lactonase UlaG M28_RS01020 IPR005892 Glycine betaine transport ATP-binding subunit M28_RS01020 IPR000644 CBS domain M28_RS01020 IPR003439 ABC transporter-like M28_RS01020 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01020 IPR003593 AAA+ ATPase domain M28_RS01020 IPR017871 ABC transporter, conserved site M28_RS01025 IPR035906 MetI-like superfamily M28_RS01025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01030 IPR012337 Ribonuclease H-like superfamily M28_RS01030 IPR029060 PIN-like domain superfamily M28_RS01030 IPR008918 Helix-hairpin-helix motif, class 2 M28_RS01030 IPR002298 DNA polymerase A M28_RS01030 IPR018320 DNA polymerase 1 M28_RS01030 IPR019760 DNA-directed DNA polymerase, family A, conserved site M28_RS01030 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M28_RS01030 IPR002421 5'-3' exonuclease, N-terminal M28_RS01030 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal M28_RS01030 IPR002562 3'-5' exonuclease domain M28_RS01030 IPR020045 DNA polymerase I-like, H3TH domain M28_RS01030 IPR036397 Ribonuclease H superfamily M28_RS01030 IPR001098 DNA-directed DNA polymerase, family A, palm domain M28_RS01040 IPR036390 Winged helix DNA-binding domain superfamily M28_RS01040 IPR002481 Ferric-uptake regulator M28_RS01040 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS01050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS01050 IPR002500 Phosphoadenosine phosphosulphate reductase M28_RS01050 IPR021845 Protein of unknown function DUF3440 M28_RS01055 IPR036086 ParB/Sulfiredoxin superfamily M28_RS01055 IPR003115 ParB/Sulfiredoxin M28_RS01075 IPR004393 Nicotinate-nucleotide pyrophosphorylase M28_RS01075 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD M28_RS01075 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal M28_RS01075 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal M28_RS01075 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal M28_RS01075 IPR013785 Aldolase-type TIM barrel M28_RS01075 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily M28_RS01095 IPR002616 tRNA-guanine(15) transglycosylase-like M28_RS01095 IPR036511 Queuine tRNA-ribosyltransferase-like M28_RS01095 IPR004803 tRNA-guanine transglycosylase M28_RS01105 IPR003784 BioY protein M28_RS01110 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS01110 IPR001279 Metallo-beta-lactamase M28_RS01115 IPR016193 Cytidine deaminase-like M28_RS01115 IPR002125 Cytidine and deoxycytidylate deaminase domain M28_RS01115 IPR016192 APOBEC/CMP deaminase, zinc-binding M28_RS01115 IPR028883 tRNA-specific adenosine deaminase M28_RS01130 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold M28_RS01130 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site M28_RS01130 IPR008992 Enterotoxin M28_RS01130 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain M28_RS01130 IPR016091 Superantigen toxin, C-terminal M28_RS01130 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial M28_RS01135 IPR001672 Phosphoglucose isomerase (PGI) M28_RS01135 IPR018189 Phosphoglucose isomerase, conserved site M28_RS01135 IPR035482 Phosphoglucose isomerase, SIS domain 2 M28_RS01135 IPR035476 Phosphoglucose isomerase, SIS domain 1 M28_RS01145 IPR013026 Tetratricopeptide repeat-containing domain M28_RS01145 IPR011990 Tetratricopeptide-like helical domain superfamily M28_RS01145 IPR019734 Tetratricopeptide repeat M28_RS01145 IPR035952 Rhomboid-like superfamily M28_RS01145 IPR022764 Peptidase S54, rhomboid domain M28_RS01150 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type M28_RS01150 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS01150 IPR005835 Nucleotidyl transferase domain M28_RS01155 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M28_RS01155 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M28_RS01155 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal M28_RS01155 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal M28_RS01155 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent M28_RS01155 IPR036291 NAD(P)-binding domain superfamily M28_RS01165 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS01165 IPR003593 AAA+ ATPase domain M28_RS01165 IPR003439 ABC transporter-like M28_RS01165 IPR039421 Type I protein exporter M28_RS01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01165 IPR017871 ABC transporter, conserved site M28_RS01165 IPR011527 ABC transporter type 1, transmembrane domain M28_RS01170 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01170 IPR003439 ABC transporter-like M28_RS01170 IPR039421 Type I protein exporter M28_RS01170 IPR017871 ABC transporter, conserved site M28_RS01170 IPR011527 ABC transporter type 1, transmembrane domain M28_RS01170 IPR003593 AAA+ ATPase domain M28_RS01175 IPR003828 Epoxyqueuosine reductase QueH M28_RS01180 IPR029054 dUTPase-like M28_RS01180 IPR036157 dUTPase-like superfamily M28_RS01180 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase M28_RS01180 IPR033704 dUTPase, trimeric M28_RS01185 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS01185 IPR003593 AAA+ ATPase domain M28_RS01185 IPR041166 LapB, rubredoxin metal binding domain M28_RS01185 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS01185 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M28_RS01185 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01185 IPR004504 DNA repair protein RadA M28_RS01190 IPR036874 Carbonic anhydrase superfamily M28_RS01190 IPR001765 Carbonic anhydrase M28_RS01195 IPR002838 Mitochondrial biogenesis protein AIM24 M28_RS01195 IPR036983 Mitochondrial biogenesis AIM24 superfamily M28_RS01195 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily M28_RS01200 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding M28_RS01200 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 M28_RS01200 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M28_RS01200 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial M28_RS01200 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M28_RS01200 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M28_RS01200 IPR033910 Glutamyl-tRNA synthetase M28_RS01200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS01205 IPR000014 PAS domain M28_RS01205 IPR005467 Histidine kinase domain M28_RS01205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS01205 IPR033463 Single cache domain 3 M28_RS01205 IPR029151 Periplasmic sensor-like domain superfamily M28_RS01205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS01205 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS01205 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB M28_RS01205 IPR039506 SpoOB, alpha-helical domain M28_RS01205 IPR013767 PAS fold M28_RS01220 IPR020539 Ribonuclease P, conserved site M28_RS01220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS01220 IPR000100 Ribonuclease P M28_RS01220 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS01225 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes M28_RS01225 IPR028055 Membrane insertase YidC/Oxa1, C-terminal M28_RS01225 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 M28_RS01230 IPR001374 R3H domain M28_RS01230 IPR038247 Jag, N-terminal domain superfamily M28_RS01230 IPR032782 Jag, N-terminal M28_RS01230 IPR038008 Jag, KH domain M28_RS01230 IPR004087 K Homology domain M28_RS01230 IPR015946 K homology domain-like, alpha/beta M28_RS01230 IPR039247 Jag protein M28_RS01230 IPR036867 R3H domain superfamily M28_RS01230 IPR034079 Jag, R3H domain M28_RS01235 IPR020939 Ribosomal protein L34, conserved site M28_RS01235 IPR000271 Ribosomal protein L34 M28_RS01240 IPR011060 Ribulose-phosphate binding barrel M28_RS01240 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase M28_RS01240 IPR013785 Aldolase-type TIM barrel M28_RS01250 IPR035906 MetI-like superfamily M28_RS01250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01255 IPR035906 MetI-like superfamily M28_RS01255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01265 IPR005264 N-acetylneuraminate lyase M28_RS01265 IPR020625 Schiff base-forming aldolase, active site M28_RS01265 IPR013785 Aldolase-type TIM barrel M28_RS01265 IPR002220 DapA-like M28_RS01270 IPR000600 ROK family M28_RS01280 IPR018228 Deoxyribonuclease, TatD-related, conserved site M28_RS01280 IPR032466 Metal-dependent hydrolase M28_RS01280 IPR001130 TatD family M28_RS01280 IPR015991 Uncharacterised hydrolase TatD-type M28_RS01285 IPR006171 TOPRIM domain M28_RS01285 IPR034141 Ribonuclease M5-like, TOPRIM domain M28_RS01285 IPR025156 Ribonuclease M5, C-terminal domain M28_RS01285 IPR004466 Ribonuclease M5 M28_RS01290 IPR023165 rRNA adenine dimethylase-like M28_RS01290 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site M28_RS01290 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal M28_RS01290 IPR011530 Ribosomal RNA adenine dimethylase M28_RS01290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS01290 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm M28_RS01295 IPR012340 Nucleic acid-binding, OB-fold M28_RS01295 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01295 IPR004881 Ribosome biogenesis GTPase RsgA M28_RS01295 IPR010914 RsgA GTPase domain M28_RS01295 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal M28_RS01295 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M28_RS01300 IPR026019 Ribulose-phosphate 3-epimerase M28_RS01300 IPR013785 Aldolase-type TIM barrel M28_RS01300 IPR000056 Ribulose-phosphate 3-epimerase-like M28_RS01300 IPR011060 Ribulose-phosphate binding barrel M28_RS01305 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily M28_RS01305 IPR006282 Thiamin pyrophosphokinase M28_RS01305 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily M28_RS01305 IPR007371 Thiamin pyrophosphokinase, catalytic domain M28_RS01305 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain M28_RS01310 IPR003798 DNA recombination RmuC M28_RS01315 IPR003607 HD/PDEase domain M28_RS01315 IPR006674 HD domain M28_RS01315 IPR020873 3'-5' exoribonuclease YhaM M28_RS01320 IPR010078 Pur operon repressor M28_RS01320 IPR029057 Phosphoribosyltransferase-like M28_RS01320 IPR015265 Bacterial purine repressor, N-terminal M28_RS01320 IPR036390 Winged helix DNA-binding domain superfamily M28_RS01320 IPR000836 Phosphoribosyltransferase domain M28_RS01320 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS01330 IPR012340 Nucleic acid-binding, OB-fold M28_RS01330 IPR006032 Ribosomal protein S12/S23 M28_RS01330 IPR005679 Ribosomal protein S12, bacterial-type M28_RS01335 IPR036823 Ribosomal protein S7 domain superfamily M28_RS01335 IPR020606 Ribosomal protein S7, conserved site M28_RS01335 IPR023798 Ribosomal protein S7 domain M28_RS01335 IPR005717 Ribosomal protein S7, bacterial/organellar-type M28_RS01335 IPR000235 Ribosomal protein S5/S7 M28_RS01340 IPR000640 Elongation factor EFG, domain V-like M28_RS01340 IPR004161 Translation elongation factor EFTu-like, domain 2 M28_RS01340 IPR035647 EF-G domain III/V-like M28_RS01340 IPR031157 Tr-type G domain, conserved site M28_RS01340 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01340 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS01340 IPR041095 Elongation Factor G, domain II M28_RS01340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS01340 IPR035649 EFG, domain V M28_RS01340 IPR009022 Elongation factor G, domain III M28_RS01340 IPR005225 Small GTP-binding protein domain M28_RS01340 IPR004540 Translation elongation factor EFG/EF2 M28_RS01340 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS01340 IPR000795 Transcription factor, GTP-binding domain M28_RS01340 IPR005517 Translation elongation factor EFG/EF2, domain IV M28_RS01345 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M28_RS01345 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site M28_RS01345 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M28_RS01345 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M28_RS01345 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I M28_RS01345 IPR036291 NAD(P)-binding domain superfamily M28_RS01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01355 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M28_RS01355 IPR003593 AAA+ ATPase domain M28_RS01355 IPR003439 ABC transporter-like M28_RS01355 IPR017871 ABC transporter, conserved site M28_RS01360 IPR035906 MetI-like superfamily M28_RS01360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M28_RS01370 IPR003824 Undecaprenyl-diphosphatase UppP M28_RS01375 IPR038471 MecA, C-terminal domain superfamily M28_RS01375 IPR008681 Negative regulator of genetic competence, MecA M28_RS01380 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site M28_RS01380 IPR000715 Glycosyl transferase, family 4 M28_RS01385 IPR003593 AAA+ ATPase domain M28_RS01385 IPR003439 ABC transporter-like M28_RS01385 IPR010230 FeS cluster assembly SUF system, ATPase SufC M28_RS01385 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01385 IPR017871 ABC transporter, conserved site M28_RS01390 IPR037284 SUF system FeS cluster assembly, SufBD superfamily M28_RS01390 IPR011542 SUF system FeS cluster assembly, SufD M28_RS01390 IPR000825 SUF system FeS cluster assembly, SufBD M28_RS01395 IPR000192 Aminotransferase class V domain M28_RS01395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS01395 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS01395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS01395 IPR010970 Cysteine desulfurase, SufS M28_RS01395 IPR016454 Cysteine desulfurase M28_RS01395 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M28_RS01400 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal M28_RS01405 IPR010231 SUF system FeS cluster assembly, SufB M28_RS01405 IPR000825 SUF system FeS cluster assembly, SufBD M28_RS01405 IPR037284 SUF system FeS cluster assembly, SufBD superfamily M28_RS01410 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily M28_RS01410 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M28_RS01410 IPR012338 Beta-lactamase/transpeptidase-like M28_RS01410 IPR015956 Penicillin-binding protein, C-terminal domain superfamily M28_RS01410 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal M28_RS01410 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M28_RS01415 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal M28_RS01415 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M28_RS01415 IPR015956 Penicillin-binding protein, C-terminal domain superfamily M28_RS01415 IPR012338 Beta-lactamase/transpeptidase-like M28_RS01415 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M28_RS01415 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily M28_RS01420 IPR023765 Solute-binding protein family 5, conserved site M28_RS01420 IPR000914 Solute-binding protein family 5 domain M28_RS01420 IPR039424 Solute-binding protein family 5 M28_RS01420 IPR030678 Peptide/nickel binding protein, MppA-type M28_RS01425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01425 IPR035906 MetI-like superfamily M28_RS01430 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M28_RS01430 IPR035906 MetI-like superfamily M28_RS01430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01435 IPR017871 ABC transporter, conserved site M28_RS01435 IPR003439 ABC transporter-like M28_RS01435 IPR003593 AAA+ ATPase domain M28_RS01435 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M28_RS01435 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01440 IPR017871 ABC transporter, conserved site M28_RS01440 IPR003593 AAA+ ATPase domain M28_RS01440 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01440 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M28_RS01440 IPR003439 ABC transporter-like M28_RS01485 IPR036412 HAD-like superfamily M28_RS01485 IPR010021 HAD-superfamily phosphatase, YqeG-like M28_RS01485 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M28_RS01485 IPR006439 HAD hydrolase, subfamily IA M28_RS01485 IPR023214 HAD superfamily M28_RS01490 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH M28_RS01490 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M28_RS01490 IPR006073 GTP binding domain M28_RS01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01495 IPR017924 RNA-binding protein YhbY M28_RS01495 IPR035920 YhbY-like superfamily M28_RS01495 IPR001890 RNA-binding, CRM domain M28_RS01500 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase M28_RS01500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS01500 IPR004821 Cytidyltransferase-like domain M28_RS01505 IPR005249 Conserved hypothetical protein CHP00488 M28_RS01505 IPR006674 HD domain M28_RS01505 IPR003607 HD/PDEase domain M28_RS01510 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M28_RS01515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS01515 IPR041698 Methyltransferase domain 25 M28_RS01520 IPR008513 tRNA(Met) cytidine acetate ligase M28_RS01520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS01530 IPR029072 YebC-like M28_RS01530 IPR026562 Probable transcriptional regulatory protein YeeN M28_RS01530 IPR026564 Transcriptional regulator TACO1-like, domain 3 M28_RS01530 IPR002876 Transcriptional regulator TACO1-like M28_RS01530 IPR017856 Integrase-like, N-terminal M28_RS01535 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M28_RS01535 IPR018313 Solute-binding protein family 3, conserved site M28_RS01540 IPR004872 Lipoprotein NlpA family M28_RS01545 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal M28_RS01545 IPR017871 ABC transporter, conserved site M28_RS01545 IPR003593 AAA+ ATPase domain M28_RS01545 IPR026253 Methionine import ATP-binding protein MetN M28_RS01545 IPR003439 ABC transporter-like M28_RS01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01545 IPR018449 NIL domain M28_RS01545 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain M28_RS01550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS01550 IPR035906 MetI-like superfamily M28_RS01555 IPR004685 Branched-chain amino acid transport system II carrier protein M28_RS01560 IPR036458 Sodium:dicarboxylate symporter superfamily M28_RS01560 IPR001991 Sodium:dicarboxylate symporter M28_RS01560 IPR023025 Serine/threonine transporter SstT M28_RS01565 IPR036291 NAD(P)-binding domain superfamily M28_RS01565 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M28_RS01565 IPR003148 Regulator of K+ conductance, N-terminal M28_RS01565 IPR006037 Regulator of K+ conductance, C-terminal M28_RS01570 IPR004772 TrkH potassium transport family M28_RS01570 IPR003445 Cation transporter M28_RS01575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS01575 IPR003682 rRNA small subunit methyltransferase G M28_RS01580 IPR023353 LemA-like domain superfamily M28_RS01580 IPR007156 LemA M28_RS01585 IPR001915 Peptidase M48 M28_RS01585 IPR022919 Peptidase M48, protease HtpX, putative M28_RS01595 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS01595 IPR001789 Signal transduction response regulator, receiver domain M28_RS01595 IPR016032 Signal transduction response regulator, C-terminal effector M28_RS01595 IPR001867 OmpR/PhoB-type DNA-binding domain M28_RS01595 IPR011006 CheY-like superfamily M28_RS01595 IPR039420 Transcriptional regulatory protein WalR-like M28_RS01600 IPR041610 ArlS, sensor domain M28_RS01600 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS01600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS01600 IPR005467 Histidine kinase domain M28_RS01600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M28_RS01600 IPR003660 HAMP domain M28_RS01600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M28_RS01600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS01605 IPR005144 ATP-cone domain M28_RS01605 IPR003796 Ribonucleotide reductase regulator NrdR-like M28_RS01615 IPR002611 IstB-like ATP-binding protein M28_RS01615 IPR009928 Primosomal DnaI, N-terminal M28_RS01615 IPR003593 AAA+ ATPase domain M28_RS01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01620 IPR006073 GTP binding domain M28_RS01620 IPR015946 K homology domain-like, alpha/beta M28_RS01620 IPR005225 Small GTP-binding protein domain M28_RS01620 IPR031166 EngA-type guanine nucleotide-binding (G) domain M28_RS01620 IPR016484 GTP-binding protein EngA M28_RS01620 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01620 IPR032859 GTPase Der, C-terminal KH-domain-like M28_RS01625 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS01625 IPR001650 Helicase, C-terminal M28_RS01625 IPR022138 Helicase SWF/SNF-related M28_RS01625 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01625 IPR038718 SNF2-like, N-terminal domain superfamily M28_RS01625 IPR000330 SNF2-related, N-terminal domain M28_RS01635 IPR004101 Mur ligase, C-terminal M28_RS01635 IPR036565 Mur-like, catalytic domain superfamily M28_RS01635 IPR036615 Mur ligase, C-terminal domain superfamily M28_RS01635 IPR005758 UDP-N-acetylmuramate--L-alanine ligase M28_RS01635 IPR000713 Mur ligase, N-terminal catalytic domain M28_RS01635 IPR013221 Mur ligase, central M28_RS01645 IPR003770 Endolytic murein transglycosylase M28_RS01650 IPR028624 Transcription elongation factor GreA/GreB M28_RS01650 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal M28_RS01650 IPR006359 Transcription elongation factor GreA M28_RS01650 IPR023459 Transcription elongation factor GreA/GreB family M28_RS01650 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal M28_RS01650 IPR018151 Transcription elongation factor, GreA/GreB, conserved site M28_RS01650 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily M28_RS01650 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily M28_RS01655 IPR028055 Membrane insertase YidC/Oxa1, C-terminal M28_RS01655 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes M28_RS01655 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 M28_RS01660 IPR001792 Acylphosphatase-like domain M28_RS01660 IPR036046 Acylphosphatase-like domain superfamily M28_RS01660 IPR017968 Acylphosphatase, conserved site M28_RS01660 IPR020456 Acylphosphatase M28_RS01665 IPR029028 Alpha/beta knot methyltransferases M28_RS01665 IPR029064 50S ribosomal protein L30e-like M28_RS01665 IPR001537 tRNA/rRNA methyltransferase, SpoU type M28_RS01665 IPR013123 RNA 2-O ribose methyltransferase, substrate binding M28_RS01665 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M28_RS01675 IPR006214 Bax inhibitor 1-related M28_RS01680 IPR005359 Protein with unknown function UPF0154 M28_RS01685 IPR001920 Asp/Glu racemase M28_RS01685 IPR033134 Asp/Glu racemase, active site 2 M28_RS01685 IPR004391 Glutamate racemase M28_RS01685 IPR015942 Asp/Glu/hydantoin racemase M28_RS01690 IPR020922 dITP/XTP pyrophosphatase M28_RS01690 IPR029001 Inosine triphosphate pyrophosphatase-like M28_RS01690 IPR002637 Ham1-like protein M28_RS01705 IPR010998 Integrase/recombinase, N-terminal M28_RS01705 IPR013762 Integrase-like, catalytic domain superfamily M28_RS01705 IPR011010 DNA breaking-rejoining enzyme, catalytic core M28_RS01705 IPR002104 Integrase, catalytic domain M28_RS01705 IPR020876 Tyrosine recombinase XerD-like M28_RS01710 IPR003768 Segregation and condensation protein A M28_RS01715 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS01715 IPR036390 Winged helix DNA-binding domain superfamily M28_RS01715 IPR005234 Chromosome segregation/condensation protein ScpB M28_RS01720 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M28_RS01720 IPR006145 Pseudouridine synthase, RsuA/RluA M28_RS01720 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M28_RS01720 IPR002942 RNA-binding S4 domain M28_RS01720 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS01720 IPR036986 RNA-binding S4 domain superfamily M28_RS01720 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M28_RS01725 IPR002696 Putative membrane protein insertion efficiency factor M28_RS01730 IPR001537 tRNA/rRNA methyltransferase, SpoU type M28_RS01730 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase M28_RS01730 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M28_RS01730 IPR029028 Alpha/beta knot methyltransferases M28_RS01735 IPR024529 ECF transporter, substrate-specific component M28_RS01735 IPR025720 ECF transporter, Riboflavin transporter RibU M28_RS01740 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M28_RS01740 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M28_RS01745 IPR006638 Elp3/MiaB/NifB M28_RS01745 IPR032432 Radical SAM, C-terminal extension M28_RS01745 IPR007197 Radical SAM M28_RS01745 IPR005911 Protein YhcC-like M28_RS01745 IPR039661 ELP3/YhcC M28_RS01745 IPR023404 Radical SAM, alpha/beta horseshoe M28_RS01750 IPR010719 Putative rRNA methylase M28_RS01750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS01755 IPR000644 CBS domain M28_RS01755 IPR002550 CNNM, transmembrane domain M28_RS01755 IPR036318 FAD-binding, type PCMH-like superfamily M28_RS01755 IPR016169 FAD-binding, type PCMH, subdomain 2 M28_RS01755 IPR005170 Transporter-associated domain M28_RS01760 IPR013785 Aldolase-type TIM barrel M28_RS01760 IPR012838 Pyruvate formate-lyase 1 activating enzyme M28_RS01760 IPR034457 Organic radical-activating enzymes M28_RS01760 IPR012839 Organic radical enzyme activase M28_RS01760 IPR034465 Pyruvate formate-lyase activase M28_RS01760 IPR007197 Radical SAM M28_RS01760 IPR001989 Radical-activating enzyme, conserved site M28_RS01765 IPR001667 DDH domain M28_RS01765 IPR038763 DHH phosphoesterase superfamily M28_RS01765 IPR004097 DHHA2 domain M28_RS01765 IPR038222 DHHA2 domain superfamily M28_RS01765 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable M28_RS01775 IPR037294 ABC transporter, BtuC-like M28_RS01775 IPR000522 ABC transporter, permease protein, BtuC-like M28_RS01780 IPR000522 ABC transporter, permease protein, BtuC-like M28_RS01780 IPR037294 ABC transporter, BtuC-like M28_RS01785 IPR002491 ABC transporter periplasmic binding domain M28_RS01790 IPR017871 ABC transporter, conserved site M28_RS01790 IPR003593 AAA+ ATPase domain M28_RS01790 IPR003439 ABC transporter-like M28_RS01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01795 IPR036565 Mur-like, catalytic domain superfamily M28_RS01795 IPR013221 Mur ligase, central M28_RS01795 IPR004101 Mur ligase, C-terminal M28_RS01795 IPR036615 Mur ligase, C-terminal domain superfamily M28_RS01795 IPR035911 MurE/MurF, N-terminal M28_RS01795 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase M28_RS01800 IPR002797 Polysaccharide biosynthesis protein M28_RS01800 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain M28_RS01800 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type M28_RS01805 IPR005765 Uracil phosphoribosyl transferase M28_RS01805 IPR034332 Uracil phosphoribosyltransferase, bacterial-type M28_RS01805 IPR029057 Phosphoribosyltransferase-like M28_RS01805 IPR000836 Phosphoribosyltransferase domain M28_RS01815 IPR018215 ClpP, Ser active site M28_RS01815 IPR033135 ClpP, histidine active site M28_RS01815 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA M28_RS01815 IPR029045 ClpP/crotonase-like domain superfamily M28_RS01815 IPR001907 ATP-dependent Clp protease proteolytic subunit M28_RS01820 IPR016979 Protein of unknown function DUF2129 M28_RS01825 IPR039430 Thymidylate kinase-like domain M28_RS01825 IPR018094 Thymidylate kinase M28_RS01825 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01830 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS01830 IPR015199 DNA polymerase III, delta subunit, C-terminal M28_RS01830 IPR004622 DNA polymerase III, delta prime subunit M28_RS01835 IPR010377 Initiation control protein YabA M28_RS01840 IPR014777 Tetrapyrrole methylase, subdomain 1 M28_RS01840 IPR035996 Tetrapyrrole methylase superfamily M28_RS01840 IPR000878 Tetrapyrrole methylase M28_RS01840 IPR018063 SAM-dependent methyltransferase RsmI, conserved site M28_RS01840 IPR008189 rRNA small subunit methyltransferase I M28_RS01840 IPR014776 Tetrapyrrole methylase, subdomain 2 M28_RS01850 IPR036822 Copper homeostasis (CutC) domain superfamily M28_RS01850 IPR023648 Copper homeostasis CutC domain M28_RS01850 IPR005627 Copper homeostasis protein CutC M28_RS01855 IPR036249 Thioredoxin-like superfamily M28_RS01855 IPR006504 Transcriptional regulator Spx/MgsR M28_RS01855 IPR006660 Arsenate reductase-like M28_RS01860 IPR005135 Endonuclease/exonuclease/phosphatase M28_RS01860 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M28_RS01860 IPR004808 AP endonuclease 1 M28_RS01860 IPR020847 AP endonuclease 1, binding site M28_RS01860 IPR020848 AP endonuclease 1, conserved site M28_RS01870 IPR014080 L-lactate oxidase M28_RS01870 IPR037396 FMN hydroxy acid dehydrogenase domain M28_RS01870 IPR000262 FMN-dependent dehydrogenase M28_RS01870 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent M28_RS01870 IPR013785 Aldolase-type TIM barrel M28_RS01875 IPR034216 C5a peptidase-like domain M28_RS01875 IPR010435 Fn3-like domain M28_RS01875 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS01875 IPR013783 Immunoglobulin-like fold M28_RS01875 IPR019931 LPXTG cell wall anchor domain M28_RS01875 IPR003137 PA domain M28_RS01875 IPR000209 Peptidase S8/S53 domain M28_RS01875 IPR036852 Peptidase S8/S53 domain superfamily M28_RS01875 IPR023827 Peptidase S8, subtilisin, Asp-active site M28_RS01875 IPR022398 Peptidase S8, subtilisin, His-active site M28_RS01875 IPR023828 Peptidase S8, subtilisin, Ser-active site M28_RS01875 IPR015500 Peptidase S8, subtilisin-related M28_RS01890 IPR023457 Methionine-tRNA synthetase, type 2 M28_RS01890 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain M28_RS01890 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M28_RS01890 IPR002547 tRNA-binding domain M28_RS01890 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal M28_RS01890 IPR012340 Nucleic acid-binding, OB-fold M28_RS01890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS01890 IPR014758 Methionyl-tRNA synthetase M28_RS01890 IPR033911 Methioninyl-tRNA synthetase core domain M28_RS01890 IPR015413 Methionyl/Leucyl tRNA synthetase M28_RS01895 IPR026494 Ribonucleoside reductase subunit beta, NrdF M28_RS01895 IPR009078 Ferritin-like superfamily M28_RS01895 IPR000358 Ribonucleotide reductase small subunit family M28_RS01895 IPR033909 Ribonucleotide reductase small subunit M28_RS01895 IPR012348 Ribonucleotide reductase-like M28_RS01900 IPR004465 Ribonucleotide reductase Class Ib, NrdI M28_RS01900 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial M28_RS01900 IPR029039 Flavoprotein-like superfamily M28_RS01905 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal M28_RS01905 IPR013509 Ribonucleotide reductase large subunit, N-terminal M28_RS01905 IPR013554 Ribonucleotide reductase N-terminal M28_RS01905 IPR000788 Ribonucleotide reductase large subunit, C-terminal M28_RS01905 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE M28_RS01905 IPR039718 Ribonucleoside-diphosphate reductase large subunit M28_RS01905 IPR013346 Ribonucleotide reductase, class I , alpha subunit M28_RS01910 IPR016678 Mono-ADP-ribosyltransferase C3/Edin M28_RS01910 IPR003540 ADP ribosyltransferase M28_RS01945 IPR016091 Superantigen toxin, C-terminal M28_RS01945 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold M28_RS01945 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site M28_RS01945 IPR008992 Enterotoxin M28_RS01945 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial M28_RS01945 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain M28_RS01945 IPR006177 Staphylococcal/streptococcal toxin, bacterial M28_RS01970 IPR036291 NAD(P)-binding domain superfamily M28_RS01970 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS01970 IPR020904 Short-chain dehydrogenase/reductase, conserved site M28_RS01975 IPR000683 Oxidoreductase, N-terminal M28_RS01975 IPR036291 NAD(P)-binding domain superfamily M28_RS01975 IPR004104 Oxidoreductase, C-terminal M28_RS01980 IPR000849 Sugar phosphate transporter M28_RS01980 IPR021159 Glycerate/sugar phosphate transporter, conserved site M28_RS01980 IPR011701 Major facilitator superfamily M28_RS01980 IPR020846 Major facilitator superfamily domain M28_RS01980 IPR005267 Glycerol-3-phosphate transporter M28_RS01980 IPR036259 MFS transporter superfamily M28_RS01985 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase M28_RS01985 IPR038009 GlmU, C-terminal LbH domain M28_RS01985 IPR001451 Hexapeptide repeat M28_RS01985 IPR025877 MobA-like NTP transferase M28_RS01985 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS01985 IPR011004 Trimeric LpxA-like superfamily M28_RS01990 IPR015797 NUDIX hydrolase-like domain superfamily M28_RS01990 IPR020084 NUDIX hydrolase, conserved site M28_RS01990 IPR000086 NUDIX hydrolase domain M28_RS01990 IPR020476 NUDIX hydrolase M28_RS02000 IPR000845 Nucleoside phosphorylase domain M28_RS02000 IPR035994 Nucleoside phosphorylase superfamily M28_RS02000 IPR010049 MTA/SAH nucleosidase M28_RS02015 IPR006129 Adhesin B M28_RS02015 IPR006127 Periplasmic solute binding protein, ZnuA-like M28_RS02015 IPR006128 Adhesion lipoprotein M28_RS02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02020 IPR017871 ABC transporter, conserved site M28_RS02020 IPR003439 ABC transporter-like M28_RS02020 IPR003593 AAA+ ATPase domain M28_RS02025 IPR037294 ABC transporter, BtuC-like M28_RS02025 IPR001626 ABC transporter, TroCD-like M28_RS02030 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase M28_RS02030 IPR029000 Cyclophilin-like domain superfamily M28_RS02030 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M28_RS02035 IPR041027 FtsK alpha domain M28_RS02035 IPR003593 AAA+ ATPase domain M28_RS02035 IPR002543 FtsK domain M28_RS02035 IPR018541 FtsK gamma domain M28_RS02035 IPR036390 Winged helix DNA-binding domain superfamily M28_RS02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02035 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS02045 IPR020783 Ribosomal protein L11, C-terminal M28_RS02045 IPR006519 Ribosomal protein L11, bacterial-type M28_RS02045 IPR020785 Ribosomal protein L11, conserved site M28_RS02045 IPR020784 Ribosomal protein L11, N-terminal M28_RS02045 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M28_RS02045 IPR000911 Ribosomal protein L11/L12 M28_RS02045 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M28_RS02050 IPR005878 Ribosomal protein L1, bacterial-type M28_RS02050 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich M28_RS02050 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein M28_RS02050 IPR023674 Ribosomal protein L1-like M28_RS02050 IPR002143 Ribosomal protein L1 M28_RS02050 IPR023673 Ribosomal protein L1, conserved site M28_RS02055 IPR011817 Uridylate kinase M28_RS02055 IPR001048 Aspartate/glutamate/uridylate kinase M28_RS02055 IPR015963 Uridylate kinase, bacteria M28_RS02055 IPR036393 Acetylglutamate kinase-like superfamily M28_RS02060 IPR002661 Ribosome recycling factor M28_RS02060 IPR023584 Ribosome recycling factor domain M28_RS02060 IPR036191 RRF superfamily M28_RS02070 IPR002569 Peptide methionine sulphoxide reductase MsrA M28_RS02070 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily M28_RS02075 IPR023089 YozE SAM-like domain M28_RS02075 IPR010673 Protein of unknown function UPF0346 M28_RS02075 IPR036806 YozE SAM-like superfamily M28_RS02085 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS02085 IPR010354 Oleate hydratase M28_RS02090 IPR003714 PhoH-like protein M28_RS02090 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02095 IPR005122 Uracil-DNA glycosylase-like M28_RS02095 IPR036895 Uracil-DNA glycosylase-like domain superfamily M28_RS02100 IPR002036 Endoribonuclease YbeY M28_RS02100 IPR020549 Endoribonuclease YbeY, conserved site M28_RS02100 IPR023091 Metalloprotease catalytic domain superfamily, predicted M28_RS02105 IPR000829 DAGK family M28_RS02105 IPR033717 Undecaprenol kinase M28_RS02105 IPR036945 Diacylglycerol kinase (DAGK) superfamily M28_RS02110 IPR030388 Era-type guanine nucleotide-binding (G) domain M28_RS02110 IPR006073 GTP binding domain M28_RS02110 IPR015946 K homology domain-like, alpha/beta M28_RS02110 IPR005662 GTP-binding protein Era M28_RS02110 IPR005225 Small GTP-binding protein domain M28_RS02110 IPR009019 K homology domain superfamily, prokaryotic type M28_RS02110 IPR004044 K Homology domain, type 2 M28_RS02110 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02115 IPR023214 HAD superfamily M28_RS02115 IPR006357 HAD-superfamily hydrolase, subfamily IIA M28_RS02115 IPR000086 NUDIX hydrolase domain M28_RS02115 IPR036412 HAD-like superfamily M28_RS02115 IPR020084 NUDIX hydrolase, conserved site M28_RS02115 IPR020476 NUDIX hydrolase M28_RS02115 IPR015797 NUDIX hydrolase-like domain superfamily M28_RS02200 IPR035937 MutM-like, N-terminal M28_RS02200 IPR010979 Ribosomal protein S13-like, H2TH M28_RS02200 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type M28_RS02200 IPR010663 Zinc finger, FPG/IleRS-type M28_RS02200 IPR020629 Formamidopyrimidine-DNA glycosylase M28_RS02200 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain M28_RS02200 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site M28_RS02200 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding M28_RS02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02205 IPR001977 Dephospho-CoA kinase M28_RS02210 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02210 IPR033186 Helicase HerA-like C-terminal M28_RS02215 IPR036259 MFS transporter superfamily M28_RS02215 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG M28_RS02215 IPR020846 Major facilitator superfamily domain M28_RS02215 IPR011701 Major facilitator superfamily M28_RS02215 IPR005828 Major facilitator, sugar transporter-like M28_RS02220 IPR038584 Ribosomal protein L33 superfamily M28_RS02220 IPR001705 Ribosomal protein L33 M28_RS02220 IPR011332 Zinc-binding ribosomal protein M28_RS02230 IPR003029 S1 domain M28_RS02230 IPR013223 Ribonuclease B, N-terminal OB domain M28_RS02230 IPR022967 RNA-binding domain, S1 M28_RS02230 IPR011805 Ribonuclease R M28_RS02230 IPR004476 Ribonuclease II/ribonuclease R M28_RS02230 IPR022966 Ribonuclease II/R, conserved site M28_RS02230 IPR001900 Ribonuclease II/R M28_RS02230 IPR040476 RNase II/RNase R, cold shock domain M28_RS02230 IPR012340 Nucleic acid-binding, OB-fold M28_RS02235 IPR000037 SsrA-binding protein M28_RS02235 IPR020081 SsrA-binding protein, conserved site M28_RS02235 IPR023620 Small protein B M28_RS02245 IPR000816 Peptidase C15, pyroglutamyl peptidase I M28_RS02245 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily M28_RS02245 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like M28_RS02245 IPR033694 Pyroglutamyl peptidase I, Cys active site M28_RS02245 IPR029762 Pyroglutamyl peptidase I, bacterial-type M28_RS02245 IPR033693 Pyroglutamyl peptidase I, Glu active site M28_RS02260 IPR001173 Glycosyltransferase 2-like M28_RS02260 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS02265 IPR037523 Vicinal oxygen chelate (VOC) domain M28_RS02265 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M28_RS02265 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M28_RS02265 IPR018146 Glyoxalase I, conserved site M28_RS02265 IPR004361 Glyoxalase I M28_RS02270 IPR033878 Nitroreductase NfsB-like M28_RS02270 IPR000415 Nitroreductase-like M28_RS02270 IPR029479 Nitroreductase M28_RS02275 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M28_RS02275 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M28_RS02275 IPR036005 Creatinase/aminopeptidase-like M28_RS02275 IPR000587 Creatinase, N-terminal M28_RS02275 IPR000994 Peptidase M24 M28_RS02280 IPR006377 Catabolite control protein A M28_RS02280 IPR000843 LacI-type HTH domain M28_RS02280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS02280 IPR028082 Periplasmic binding protein-like I M28_RS02285 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M28_RS02285 IPR001296 Glycosyl transferase, family 1 M28_RS02290 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M28_RS02290 IPR001296 Glycosyl transferase, family 1 M28_RS02295 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M28_RS02295 IPR004095 TGS M28_RS02295 IPR033728 Threonine-tRNA ligase catalytic core domain M28_RS02295 IPR002320 Threonine-tRNA ligase, class IIa M28_RS02295 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M28_RS02295 IPR012675 Beta-grasp domain superfamily M28_RS02295 IPR036621 Anticodon-binding domain superfamily M28_RS02295 IPR004154 Anticodon-binding M28_RS02295 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS02295 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M28_RS02295 IPR012676 TGS-like M28_RS02300 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02300 IPR003439 ABC transporter-like M28_RS02300 IPR003593 AAA+ ATPase domain M28_RS02300 IPR017871 ABC transporter, conserved site M28_RS02320 IPR016039 Thiolase-like M28_RS02320 IPR020617 Thiolase, C-terminal M28_RS02320 IPR020610 Thiolase, active site M28_RS02320 IPR020613 Thiolase, conserved site M28_RS02320 IPR002155 Thiolase M28_RS02320 IPR020616 Thiolase, N-terminal M28_RS02335 IPR011006 CheY-like superfamily M28_RS02335 IPR039420 Transcriptional regulatory protein WalR-like M28_RS02335 IPR001789 Signal transduction response regulator, receiver domain M28_RS02335 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS02335 IPR001867 OmpR/PhoB-type DNA-binding domain M28_RS02335 IPR016032 Signal transduction response regulator, C-terminal effector M28_RS02340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M28_RS02340 IPR001610 PAC motif M28_RS02340 IPR000014 PAS domain M28_RS02340 IPR000700 PAS-associated, C-terminal M28_RS02340 IPR035965 PAS domain superfamily M28_RS02340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M28_RS02340 IPR005467 Histidine kinase domain M28_RS02340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS02340 IPR003660 HAMP domain M28_RS02340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS02340 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS02345 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS02345 IPR001279 Metallo-beta-lactamase M28_RS02350 IPR036389 Ribonuclease III, endonuclease domain superfamily M28_RS02350 IPR000999 Ribonuclease III domain M28_RS02350 IPR011907 Ribonuclease III M28_RS02350 IPR014720 Double-stranded RNA-binding domain M28_RS02355 IPR024704 Structural maintenance of chromosomes protein M28_RS02355 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02355 IPR003395 RecF/RecN/SMC, N-terminal M28_RS02355 IPR010935 SMCs flexible hinge M28_RS02355 IPR036277 SMCs flexible hinge superfamily M28_RS02355 IPR011890 Structural maintenance of chromosomes protein, prokaryotic M28_RS02370 IPR022893 Shikimate dehydrogenase family M28_RS02370 IPR041121 SDH, C-terminal M28_RS02370 IPR036291 NAD(P)-binding domain superfamily M28_RS02370 IPR011342 Shikimate dehydrogenase M28_RS02370 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal M28_RS02390 IPR027790 S-adenosylmethionine synthase M28_RS02410 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation M28_RS02410 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal M28_RS02410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M28_RS02410 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal M28_RS02410 IPR017476 UDP-glucose/GDP-mannose dehydrogenase M28_RS02410 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily M28_RS02410 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type M28_RS02410 IPR036291 NAD(P)-binding domain superfamily M28_RS02465 IPR000150 Cof family M28_RS02465 IPR023214 HAD superfamily M28_RS02465 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS02465 IPR036412 HAD-like superfamily M28_RS02470 IPR000150 Cof family M28_RS02470 IPR036412 HAD-like superfamily M28_RS02470 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS02470 IPR023214 HAD superfamily M28_RS02475 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M28_RS02475 IPR013822 Signal recognition particle SRP54, helical bundle M28_RS02475 IPR004390 Signal-recognition particle receptor FtsY M28_RS02475 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02475 IPR036225 SRP/SRP receptor, N-terminal M28_RS02475 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M28_RS02475 IPR003593 AAA+ ATPase domain M28_RS02480 IPR020846 Major facilitator superfamily domain M28_RS02480 IPR011701 Major facilitator superfamily M28_RS02480 IPR004638 Drug resistance transporter EmrB-like M28_RS02480 IPR036259 MFS transporter superfamily M28_RS02485 IPR004341 CAT RNA-binding domain M28_RS02485 IPR036650 CAT RNA-binding domain superfamily M28_RS02485 IPR001550 Transcription antiterminator, conserved site M28_RS02485 IPR011608 PRD domain M28_RS02485 IPR036634 PRD domain superfamily M28_RS02490 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component M28_RS02490 IPR036878 Glucose permease domain IIB M28_RS02490 IPR011055 Duplicated hybrid motif M28_RS02490 IPR013013 Phosphotransferase system, EIIC component, type 1 M28_RS02490 IPR003352 Phosphotransferase system, EIIC M28_RS02490 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M28_RS02490 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M28_RS02490 IPR001996 Phosphotransferase system, IIB component, type 1 M28_RS02495 IPR001360 Glycoside hydrolase family 1 M28_RS02495 IPR018120 Glycoside hydrolase family 1, active site M28_RS02495 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M28_RS02495 IPR017853 Glycoside hydrolase superfamily M28_RS02500 IPR015402 Protein of unknown function DUF1980 M28_RS02505 IPR005524 Predicted permease DUF318 M28_RS02515 IPR037027 YqgF/RNase H-like domain superfamily M28_RS02515 IPR018974 Tex-like protein, N-terminal M28_RS02515 IPR032639 Tex protein, YqgF-like domain M28_RS02515 IPR023323 Tex-like domain superfamily M28_RS02515 IPR003029 S1 domain M28_RS02515 IPR022967 RNA-binding domain, S1 M28_RS02515 IPR010994 RuvA domain 2-like M28_RS02515 IPR012337 Ribonuclease H-like superfamily M28_RS02515 IPR012340 Nucleic acid-binding, OB-fold M28_RS02515 IPR041692 HHH domain 9 M28_RS02515 IPR006641 YqgF/RNase H-like domain M28_RS02515 IPR023319 Tex-like protein, HTH domain superfamily M28_RS02520 IPR023524 Uncharacterised protein family SprT-like M28_RS02520 IPR006640 SprT-like M28_RS02530 IPR003755 HPr(Ser) kinase/phosphorylase M28_RS02530 IPR011104 HPr kinase/phosphorylase, C-terminal M28_RS02530 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal M28_RS02530 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M28_RS02535 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt M28_RS02545 IPR024623 Uncharacterised protein family YtxH M28_RS02560 IPR001539 Peptidase U32 M28_RS02560 IPR032525 Peptidase family U32, C-terminal M28_RS02565 IPR017154 Uncharacterised conserved protein UCP037246 M28_RS02565 IPR003173 Transcriptional coactivator p15 (PC4) M28_RS02570 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M28_RS02570 IPR012340 Nucleic acid-binding, OB-fold M28_RS02570 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal M28_RS02570 IPR002313 Lysine-tRNA ligase, class II M28_RS02570 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS02570 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M28_RS02590 IPR012651 Thiamine transporter ThiT M28_RS02615 IPR042088 Oligoendopeptidase F, C-terminal domain M28_RS02615 IPR001567 Peptidase M3A/M3B catalytic domain M28_RS02615 IPR004438 Peptidase M3B, oligoendopeptidase F M28_RS02615 IPR013647 Oligopeptidase F, N-terminal domain M28_RS02620 IPR021135 Phosphoenolpyruvate carboxylase M28_RS02620 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M28_RS02620 IPR033129 Phosphoenolpyruvate carboxylase, His active site M28_RS02620 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site M28_RS02620 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type M28_RS02625 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site M28_RS02625 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA M28_RS02630 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M28_RS02630 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle M28_RS02630 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M28_RS02630 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS02630 IPR000795 Transcription factor, GTP-binding domain M28_RS02630 IPR005225 Small GTP-binding protein domain M28_RS02630 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02630 IPR033720 Elongation factor Tu, domain 2 M28_RS02630 IPR031157 Tr-type G domain, conserved site M28_RS02630 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain M28_RS02630 IPR004161 Translation elongation factor EFTu-like, domain 2 M28_RS02635 IPR013785 Aldolase-type TIM barrel M28_RS02635 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic M28_RS02635 IPR020861 Triosephosphate isomerase, active site M28_RS02635 IPR000652 Triosephosphate isomerase M28_RS02635 IPR035990 Triosephosphate isomerase superfamily M28_RS02650 IPR000150 Cof family M28_RS02650 IPR036412 HAD-like superfamily M28_RS02650 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS02660 IPR006674 HD domain M28_RS02660 IPR003607 HD/PDEase domain M28_RS02670 IPR018303 P-type ATPase, phosphorylation site M28_RS02670 IPR023298 P-type ATPase, transmembrane domain superfamily M28_RS02670 IPR023299 P-type ATPase, cytoplasmic domain N M28_RS02670 IPR008250 P-type ATPase, A domain superfamily M28_RS02670 IPR036412 HAD-like superfamily M28_RS02670 IPR004014 Cation-transporting P-type ATPase, N-terminal M28_RS02670 IPR001757 P-type ATPase M28_RS02670 IPR023214 HAD superfamily M28_RS02670 IPR006068 Cation-transporting P-type ATPase, C-terminal M28_RS02675 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS02675 IPR000843 LacI-type HTH domain M28_RS02675 IPR012310 DNA ligase, ATP-dependent, central M28_RS02675 IPR028082 Periplasmic binding protein-like I M28_RS02685 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component M28_RS02690 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit M28_RS02695 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup M28_RS02695 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily M28_RS02695 IPR004720 Phosphotransferase system, sorbose subfamily IIB component M28_RS02700 IPR010905 Glycosyl hydrolase, family 88 M28_RS02700 IPR012341 Six-hairpin glycosidase-like superfamily M28_RS02700 IPR008928 Six-hairpin glycosidase superfamily M28_RS02710 IPR036291 NAD(P)-binding domain superfamily M28_RS02710 IPR020904 Short-chain dehydrogenase/reductase, conserved site M28_RS02710 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS02725 IPR000887 KDPG/KHG aldolase M28_RS02725 IPR013785 Aldolase-type TIM barrel M28_RS02730 IPR023214 HAD superfamily M28_RS02730 IPR023733 Pyrophosphatase PpaX M28_RS02730 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M28_RS02730 IPR041492 Haloacid dehalogenase-like hydrolase M28_RS02730 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M28_RS02730 IPR006439 HAD hydrolase, subfamily IA M28_RS02730 IPR036412 HAD-like superfamily M28_RS02735 IPR009164 Fructose-1,6-bisphosphatase class 3 M28_RS02740 IPR004453 Epoxyqueuosine reductase QueG M28_RS02740 IPR009051 Alpha-helical ferredoxin M28_RS02740 IPR013542 Domain of unknown function DUF1730 M28_RS02740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M28_RS02740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M28_RS02750 IPR003593 AAA+ ATPase domain M28_RS02750 IPR005286 Cell division protein FtsE, ATP-binding M28_RS02750 IPR017871 ABC transporter, conserved site M28_RS02750 IPR003439 ABC transporter-like M28_RS02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02755 IPR003838 ABC transporter permease protein domain M28_RS02755 IPR004513 Cell division protein FtsX M28_RS02755 IPR040690 FtsX, extracellular domain M28_RS02760 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS02760 IPR001279 Metallo-beta-lactamase M28_RS02765 IPR014007 Acetoin reductase M28_RS02765 IPR020904 Short-chain dehydrogenase/reductase, conserved site M28_RS02765 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS02765 IPR036291 NAD(P)-binding domain superfamily M28_RS02770 IPR001650 Helicase, C-terminal M28_RS02770 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02770 IPR013520 Exonuclease, RNase T/DNA polymerase III M28_RS02770 IPR012337 Ribonuclease H-like superfamily M28_RS02770 IPR036397 Ribonuclease H superfamily M28_RS02770 IPR006935 Helicase/UvrB, N-terminal M28_RS02770 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M28_RS02770 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type M28_RS02770 IPR006555 ATP-dependent helicase, C-terminal M28_RS02770 IPR006310 3'-5' exonuclease DinG M28_RS02775 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site M28_RS02775 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS02775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS02775 IPR004839 Aminotransferase, class I/classII M28_RS02775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS02780 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M28_RS02780 IPR012340 Nucleic acid-binding, OB-fold M28_RS02780 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb M28_RS02780 IPR004522 Asparagine-tRNA ligase M28_RS02780 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS02780 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M28_RS02785 IPR005337 RapZ-like family M28_RS02785 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02790 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 M28_RS02790 IPR010119 Gluconeogenesis factor M28_RS02790 IPR038136 Gluconeogenesis factor superfamily M28_RS02795 IPR023054 Sporulation regulator WhiA, C-terminal M28_RS02795 IPR003802 Sporulation regulator WhiA M28_RS02795 IPR039518 WhiA, LAGLIDADG-like domain M28_RS02795 IPR027434 Homing endonuclease M28_RS02795 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain M28_RS02795 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS02800 IPR005322 Peptidase C69, dipeptidase A M28_RS02805 IPR012674 Calycin M28_RS02805 IPR015304 ZinT domain M28_RS02805 IPR006127 Periplasmic solute binding protein, ZnuA-like M28_RS02805 IPR006129 Adhesin B M28_RS02805 IPR006128 Adhesion lipoprotein M28_RS02810 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M28_RS02810 IPR000524 Transcription regulator HTH, GntR M28_RS02810 IPR011663 UbiC transcription regulator-associated M28_RS02810 IPR036390 Winged helix DNA-binding domain superfamily M28_RS02810 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS02815 IPR035464 AgaS, SIS domain M28_RS02815 IPR035466 GlmS/AgaS, SIS domain 1 M28_RS02815 IPR001347 Sugar isomerase (SIS) M28_RS02815 IPR014180 Sugar isomerase, AgaS M28_RS02820 IPR034704 L28p-like M28_RS02820 IPR002150 Ribosomal protein L31 M28_RS02820 IPR027493 Ribosomal protein L31 type B M28_RS02820 IPR042105 Ribosomal protein L31 superfamily M28_RS02825 IPR038763 DHH phosphoesterase superfamily M28_RS02825 IPR003156 DHHA1 domain M28_RS02825 IPR001667 DDH domain M28_RS02830 IPR008254 Flavodoxin/nitric oxide synthase M28_RS02830 IPR010087 Flavodoxin, short chain M28_RS02830 IPR001094 Flavodoxin-like M28_RS02830 IPR029039 Flavoprotein-like superfamily M28_RS02840 IPR001807 Chloride channel, voltage gated M28_RS02840 IPR014743 Chloride channel, core M28_RS02845 IPR018257 Ribosomal protein L19, conserved site M28_RS02845 IPR001857 Ribosomal protein L19 M28_RS02845 IPR008991 Translation protein SH3-like domain superfamily M28_RS02845 IPR038657 Ribosomal protein L19 superfamily M28_RS02865 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M28_RS02865 IPR002288 DNA gyrase B subunit, C-terminal M28_RS02865 IPR011557 DNA gyrase, subunit B M28_RS02865 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS02865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS02865 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS02865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS02865 IPR001241 DNA topoisomerase, type IIA M28_RS02865 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal M28_RS02865 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 M28_RS02865 IPR034160 DNA gyrase subunit B, TOPRIM domain M28_RS02865 IPR006171 TOPRIM domain M28_RS02865 IPR018522 DNA topoisomerase, type IIA, conserved site M28_RS02870 IPR010379 Septation ring formation regulator EzrA M28_RS02880 IPR036849 Enolase-like, C-terminal domain superfamily M28_RS02880 IPR020810 Enolase, C-terminal TIM barrel domain M28_RS02880 IPR000941 Enolase M28_RS02880 IPR029017 Enolase-like, N-terminal M28_RS02880 IPR020811 Enolase, N-terminal M28_RS02880 IPR020809 Enolase, conserved site M28_RS02935 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS02935 IPR017871 ABC transporter, conserved site M28_RS02935 IPR003439 ABC transporter-like M28_RS02935 IPR003593 AAA+ ATPase domain M28_RS02960 IPR010387 Queuosine precursor transporter QueT M28_RS02965 IPR004150 NAD-dependent DNA ligase, OB-fold M28_RS02965 IPR012340 Nucleic acid-binding, OB-fold M28_RS02965 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M28_RS02965 IPR013839 NAD-dependent DNA ligase, adenylation M28_RS02965 IPR001357 BRCT domain M28_RS02965 IPR036420 BRCT domain superfamily M28_RS02965 IPR041663 DisA/LigA, helix-hairpin-helix motif M28_RS02965 IPR018239 NAD-dependent DNA ligase, active site M28_RS02965 IPR001679 NAD-dependent DNA ligase M28_RS02965 IPR033136 NAD-dependent DNA ligase, conserved site M28_RS02965 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type M28_RS02965 IPR013840 NAD-dependent DNA ligase, N-terminal M28_RS02965 IPR010994 RuvA domain 2-like M28_RS02970 IPR001206 Diacylglycerol kinase, catalytic domain M28_RS02970 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal M28_RS02970 IPR005218 Diacylglycerol/lipid kinase M28_RS02970 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M28_RS02975 IPR000454 ATP synthase, F0 complex, subunit C M28_RS02975 IPR038662 F1F0 ATP synthase subunit C superfamily M28_RS02975 IPR002379 V-ATPase proteolipid subunit C-like domain M28_RS02975 IPR035921 F/V-ATP synthase subunit C superfamily M28_RS02975 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site M28_RS02980 IPR035908 ATP synthase, F0 complex, subunit A superfamily M28_RS02980 IPR023011 ATP synthase, F0 complex, subunit A, active site M28_RS02980 IPR000568 ATP synthase, F0 complex, subunit A M28_RS02985 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M28_RS02985 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast M28_RS02985 IPR005864 ATP synthase, F0 complex, subunit b, bacterial M28_RS02990 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily M28_RS02990 IPR000711 ATPase, OSCP/delta subunit M28_RS02995 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M28_RS02995 IPR000793 ATP synthase, alpha subunit, C-terminal M28_RS02995 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily M28_RS02995 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain M28_RS02995 IPR005294 ATP synthase, F1 complex, alpha subunit M28_RS02995 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M28_RS02995 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M28_RS02995 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M28_RS02995 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03000 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site M28_RS03000 IPR000131 ATP synthase, F1 complex, gamma subunit M28_RS03000 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily M28_RS03005 IPR005722 ATP synthase, F1 complex, beta subunit M28_RS03005 IPR003593 AAA+ ATPase domain M28_RS03005 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M28_RS03005 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M28_RS03005 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M28_RS03005 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal M28_RS03005 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03005 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M28_RS03010 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal M28_RS03010 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit M28_RS03010 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M28_RS03010 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal M28_RS03020 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase M28_RS03020 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M28_RS03020 IPR036968 Enolpyruvate transferase domain superfamily M28_RS03020 IPR001986 Enolpyruvate transferase domain M28_RS03035 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal M28_RS03035 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial M28_RS03035 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS03035 IPR002319 Phenylalanyl-tRNA synthetase M28_RS03035 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M28_RS03035 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit M28_RS03040 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily M28_RS03040 IPR009061 Putative DNA-binding domain superfamily M28_RS03040 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 M28_RS03040 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain M28_RS03040 IPR002547 tRNA-binding domain M28_RS03040 IPR012340 Nucleic acid-binding, OB-fold M28_RS03040 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain M28_RS03040 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit M28_RS03040 IPR005121 Ferrodoxin-fold anticodon-binding domain M28_RS03040 IPR005147 tRNA synthetase, B5-domain M28_RS03040 IPR005146 B3/B4 tRNA-binding domain M28_RS03055 IPR003838 ABC transporter permease protein domain M28_RS03060 IPR003439 ABC transporter-like M28_RS03060 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03060 IPR003593 AAA+ ATPase domain M28_RS03065 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative M28_RS03070 IPR014141 DNA helicase subunit RexB M28_RS03070 IPR011335 Restriction endonuclease type II-like M28_RS03070 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type M28_RS03070 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03075 IPR011604 Exonuclease, phage-type/RecB, C-terminal M28_RS03075 IPR000212 DNA helicase, UvrD/REP type M28_RS03075 IPR014152 DNA helicase subunit AddA M28_RS03075 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type M28_RS03075 IPR011335 Restriction endonuclease type II-like M28_RS03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03075 IPR014017 UvrD-like DNA helicase, C-terminal M28_RS03075 IPR034739 UvrD/AddA helicase, N-terminal M28_RS03075 IPR014016 UvrD-like helicase, ATP-binding domain M28_RS03080 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M28_RS03080 IPR018313 Solute-binding protein family 3, conserved site M28_RS03080 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M28_RS03085 IPR018278 Ribosomal protein S21, conserved site M28_RS03085 IPR038380 Ribosomal protein S21 superfamily M28_RS03085 IPR001911 Ribosomal protein S21 M28_RS03090 IPR019823 Large-conductance mechanosensitive channel, conserved site M28_RS03090 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L M28_RS03090 IPR001185 Large-conductance mechanosensitive channel M28_RS03090 IPR036019 Gated mechanosensitive channel M28_RS03095 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily M28_RS03095 IPR013264 DNA primase, catalytic core, N-terminal M28_RS03095 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M28_RS03095 IPR019475 DNA primase, DnaB-helicase binding domain M28_RS03095 IPR006295 DNA primase, DnaG M28_RS03095 IPR036977 DNA Primase, CHC2-type zinc finger M28_RS03095 IPR002694 Zinc finger, CHC2-type M28_RS03095 IPR006171 TOPRIM domain M28_RS03095 IPR034151 Bacterial DnaG primase, TOPRIM domain M28_RS03095 IPR030846 DNA primase DnaG, bacteria M28_RS03100 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS03100 IPR013324 RNA polymerase sigma factor, region 3/4-like M28_RS03100 IPR028630 RNA polymerase sigma factor RpoD M28_RS03100 IPR012760 RNA polymerase sigma factor RpoD, C-terminal M28_RS03100 IPR014284 RNA polymerase sigma-70 like domain M28_RS03100 IPR007627 RNA polymerase sigma-70 region 2 M28_RS03100 IPR007127 RNA polymerase sigma factor 70, region 1.1 M28_RS03100 IPR007630 RNA polymerase sigma-70 region 4 M28_RS03100 IPR007624 RNA polymerase sigma-70 region 3 M28_RS03100 IPR009042 RNA polymerase sigma-70 region 1.2 M28_RS03100 IPR000943 RNA polymerase sigma-70 M28_RS03100 IPR013325 RNA polymerase sigma factor, region 2 M28_RS03105 IPR002744 MIP18 family-like M28_RS03105 IPR034904 Fe-S cluster assembly domain superfamily M28_RS03110 IPR005913 dTDP-4-dehydrorhamnose reductase family M28_RS03110 IPR036291 NAD(P)-binding domain superfamily M28_RS03110 IPR029903 RmlD-like substrate binding domain M28_RS03120 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS03120 IPR027791 Galactosyltransferase, C-terminal M28_RS03120 IPR001173 Glycosyltransferase 2-like M28_RS03130 IPR003593 AAA+ ATPase domain M28_RS03130 IPR003439 ABC transporter-like M28_RS03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03130 IPR017871 ABC transporter, conserved site M28_RS03135 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS03135 IPR001173 Glycosyltransferase 2-like M28_RS03150 IPR039528 DPM1-like M28_RS03150 IPR001173 Glycosyltransferase 2-like M28_RS03150 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS03170 IPR036264 Bacterial exopeptidase dimerisation domain M28_RS03170 IPR010161 Peptidase M20B, tripeptide aminopeptidase M28_RS03170 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M28_RS03170 IPR011650 Peptidase M20, dimerisation domain M28_RS03170 IPR002933 Peptidase M20 M28_RS03190 IPR003136 Cytidylate kinase M28_RS03190 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03190 IPR011994 Cytidylate kinase domain M28_RS03195 IPR019814 Translation initiation factor 3, N-terminal M28_RS03195 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily M28_RS03195 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily M28_RS03195 IPR019813 Translation initiation factor 3, conserved site M28_RS03195 IPR001288 Translation initiation factor 3 M28_RS03195 IPR019815 Translation initiation factor 3, C-terminal M28_RS03200 IPR037229 Ribosomal protein L35 superfamily M28_RS03200 IPR018265 Ribosomal protein L35, conserved site M28_RS03200 IPR021137 Ribosomal protein L35 M28_RS03200 IPR001706 Ribosomal protein L35, non-mitochondrial M28_RS03205 IPR005813 Ribosomal protein L20 M28_RS03205 IPR035566 Ribosomal protein L20, C-terminal M28_RS03210 IPR017850 Alkaline-phosphatase-like, core domain superfamily M28_RS03210 IPR000917 Sulfatase, N-terminal M28_RS03210 IPR012160 Lipoteichoic acid synthase-like M28_RS03215 IPR036974 PUA domain superfamily M28_RS03215 IPR015947 PUA-like superfamily M28_RS03215 IPR041532 RlmI, PUA-like domain M28_RS03215 IPR019614 S-adenosylmethionine-dependent methyltransferase M28_RS03215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS03215 IPR002478 PUA domain M28_RS03220 IPR013785 Aldolase-type TIM barrel M28_RS03220 IPR001381 3-dehydroquinate dehydratase type I M28_RS03225 IPR020541 Chorismate synthase, conserved site M28_RS03225 IPR035904 Chorismate synthase AroC superfamily M28_RS03225 IPR000453 Chorismate synthase M28_RS03230 IPR023378 YheA/YmcA-like domain superfamily M28_RS03230 IPR010368 Control of competence regulator ComK, YlbF/YmcA M28_RS03235 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M28_RS03235 IPR023753 FAD/NAD(P)-binding domain M28_RS03235 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M28_RS03235 IPR006322 Glutathione reductase, eukaryote/bacterial M28_RS03235 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M28_RS03235 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M28_RS03235 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS03240 IPR036565 Mur-like, catalytic domain superfamily M28_RS03240 IPR036615 Mur ligase, C-terminal domain superfamily M28_RS03240 IPR004101 Mur ligase, C-terminal M28_RS03240 IPR013221 Mur ligase, central M28_RS03240 IPR001645 Folylpolyglutamate synthetase M28_RS03240 IPR018109 Folylpolyglutamate synthetase, conserved site M28_RS03250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS03250 IPR000192 Aminotransferase class V domain M28_RS03250 IPR016454 Cysteine desulfurase M28_RS03250 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS03250 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M28_RS03250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS03255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS03255 IPR020536 Thil, AANH domain M28_RS03255 IPR004114 THUMP domain M28_RS03255 IPR003720 tRNA sulfurtransferase ThiI M28_RS03260 IPR019079 Capsule synthesis protein, CapA M28_RS03260 IPR029052 Metallo-dependent phosphatase-like M28_RS03265 IPR036164 L21-like superfamily M28_RS03265 IPR001787 Ribosomal protein L21 M28_RS03265 IPR018258 Ribosomal protein L21, conserved site M28_RS03265 IPR028909 Ribosomal protein L21-like M28_RS03275 IPR018261 Ribosomal protein L27, conserved site M28_RS03275 IPR001684 Ribosomal protein L27 M28_RS03285 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS03285 IPR000847 Transcription regulator HTH, LysR M28_RS03285 IPR005119 LysR, substrate-binding M28_RS03285 IPR036390 Winged helix DNA-binding domain superfamily M28_RS03290 IPR001872 Peptidase A8, signal peptidase II M28_RS03295 IPR002942 RNA-binding S4 domain M28_RS03295 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS03295 IPR006225 Pseudouridine synthase, RluC/RluD M28_RS03295 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M28_RS03295 IPR006145 Pseudouridine synthase, RsuA/RluA M28_RS03295 IPR036986 RNA-binding S4 domain superfamily M28_RS03300 IPR029057 Phosphoribosyltransferase-like M28_RS03300 IPR000836 Phosphoribosyltransferase domain M28_RS03300 IPR023050 Bifunctional protein PyrR M28_RS03305 IPR006042 Xanthine/uracil permease M28_RS03305 IPR006043 Xanthine/uracil/vitamin C permease M28_RS03305 IPR029935 Uracil permease M28_RS03310 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M28_RS03310 IPR006130 Aspartate/ornithine carbamoyltransferase M28_RS03310 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M28_RS03310 IPR002082 Aspartate carbamoyltransferase M28_RS03310 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M28_RS03315 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain M28_RS03315 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily M28_RS03315 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain M28_RS03315 IPR006274 Carbamoyl-phosphate synthase, small subunit M28_RS03315 IPR017926 Glutamine amidotransferase M28_RS03315 IPR029062 Class I glutamine amidotransferase-like M28_RS03325 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain M28_RS03325 IPR011761 ATP-grasp fold M28_RS03325 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily M28_RS03325 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain M28_RS03325 IPR006275 Carbamoyl-phosphate synthase, large subunit M28_RS03325 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain M28_RS03325 IPR036914 Methylglyoxal synthase-like domain superfamily M28_RS03325 IPR011607 Methylglyoxal synthase-like domain M28_RS03325 IPR016185 Pre-ATP-grasp domain superfamily M28_RS03325 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M28_RS03330 IPR006143 RND efflux pump, membrane fusion protein M28_RS03330 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M28_RS03335 IPR017871 ABC transporter, conserved site M28_RS03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03335 IPR003439 ABC transporter-like M28_RS03335 IPR003593 AAA+ ATPase domain M28_RS03340 IPR003838 ABC transporter permease protein domain M28_RS03340 IPR005085 Carbohydrate binding module family 25 M28_RS03340 IPR025857 MacB-like periplasmic core domain M28_RS03345 IPR030395 Glycerophosphodiester phosphodiesterase domain M28_RS03345 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily M28_RS03350 IPR023803 Ribosomal protein S16 domain superfamily M28_RS03350 IPR000307 Ribosomal protein S16 M28_RS03355 IPR020627 Uncharacterised protein family UPF0109 M28_RS03355 IPR015946 K homology domain-like, alpha/beta M28_RS03355 IPR009019 K homology domain superfamily, prokaryotic type M28_RS03380 IPR011033 PRC-barrel-like superfamily M28_RS03380 IPR027275 PRC-barrel domain M28_RS03380 IPR002676 RimM, N-terminal M28_RS03380 IPR036976 RimM, N-terminal domain superfamily M28_RS03380 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS03380 IPR011961 16S rRNA processing protein RimM M28_RS03385 IPR029028 Alpha/beta knot methyltransferases M28_RS03385 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria M28_RS03385 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal M28_RS03385 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M28_RS03385 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain M28_RS03390 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS03390 IPR022890 Ferredoxin--NADP reductase, type 2 M28_RS03390 IPR023753 FAD/NAD(P)-binding domain M28_RS03400 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M28_RS03400 IPR036291 NAD(P)-binding domain superfamily M28_RS03400 IPR003710 Ketopantoate reductase ApbA/PanE M28_RS03400 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M28_RS03400 IPR013752 Ketopantoate reductase, C-terminal domain M28_RS03400 IPR013332 Ketopantoate reductase, N-terminal domain M28_RS03405 IPR014036 DeoR C-terminal sensor domain M28_RS03405 IPR001034 DeoR-type HTH domain M28_RS03405 IPR037171 NagB/RpiA transferase-like M28_RS03405 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M28_RS03405 IPR036390 Winged helix DNA-binding domain superfamily M28_RS03410 IPR017583 Tagatose/fructose phosphokinase M28_RS03410 IPR029056 Ribokinase-like M28_RS03410 IPR022463 Fructose 1-phosphate kinase M28_RS03410 IPR011611 Carbohydrate kinase PfkB M28_RS03410 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M28_RS03415 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M28_RS03415 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS03415 IPR004715 Phosphotransferase system, IIA component fructose subfamily M28_RS03415 IPR006327 Phosphotransferase system, fructose IIC component M28_RS03415 IPR013011 Phosphotransferase system, EIIB component, type 2 M28_RS03415 IPR036095 PTS system IIB component-like superfamily M28_RS03415 IPR013014 Phosphotransferase system, EIIC component, type 2 M28_RS03415 IPR002178 PTS EIIA type-2 domain M28_RS03415 IPR016152 Phosphotransferase/anion transporter M28_RS03420 IPR018392 LysM domain M28_RS03420 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain M28_RS03420 IPR036779 LysM domain superfamily M28_RS03425 IPR036779 LysM domain superfamily M28_RS03425 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain M28_RS03425 IPR018392 LysM domain M28_RS03435 IPR008992 Enterotoxin M28_RS03435 IPR006177 Staphylococcal/streptococcal toxin, bacterial M28_RS03435 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain M28_RS03435 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial M28_RS03435 IPR016091 Superantigen toxin, C-terminal M28_RS03435 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold M28_RS03435 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site M28_RS03440 IPR015117 Ig protease IdeS M28_RS03440 IPR038765 Papain-like cysteine peptidase superfamily M28_RS03440 IPR005877 YSIRK Gram-positive signal peptide M28_RS03445 IPR001564 Nucleoside diphosphate kinase M28_RS03445 IPR036850 Nucleoside diphosphate kinase-like domain superfamily M28_RS03445 IPR034907 Nucleoside diphosphate kinase-like domain M28_RS03445 IPR023005 Nucleoside diphosphate kinase, active site M28_RS03455 IPR003797 DegV M28_RS03460 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain M28_RS03460 IPR002646 Poly A polymerase, head domain M28_RS03460 IPR023068 CCA-adding enzyme, firmicutes M28_RS03460 IPR032810 CCA-adding enzyme, C-terminal M28_RS03465 IPR017871 ABC transporter, conserved site M28_RS03465 IPR003439 ABC transporter-like M28_RS03465 IPR032781 ABC-transporter extension domain M28_RS03465 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03465 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M28_RS03465 IPR003593 AAA+ ATPase domain M28_RS03465 IPR032524 ABC transporter Uup, C-terminal M28_RS03475 IPR023635 Peptide deformylase M28_RS03475 IPR036821 Peptide deformylase superfamily M28_RS03480 IPR006146 5'-Nucleotidase, conserved site M28_RS03480 IPR006179 5'-Nucleotidase/apyrase M28_RS03480 IPR041498 Bacterial Ig domain M28_RS03480 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M28_RS03480 IPR029052 Metallo-dependent phosphatase-like M28_RS03480 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M28_RS03480 IPR008334 5'-Nucleotidase, C-terminal M28_RS03485 IPR007685 RelA/SpoT M28_RS03490 IPR001867 OmpR/PhoB-type DNA-binding domain M28_RS03490 IPR011006 CheY-like superfamily M28_RS03490 IPR001789 Signal transduction response regulator, receiver domain M28_RS03490 IPR039420 Transcriptional regulatory protein WalR-like M28_RS03490 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS03495 IPR005467 Histidine kinase domain M28_RS03495 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS03495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS03495 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M28_RS03495 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M28_RS03500 IPR000705 Galactokinase M28_RS03500 IPR013750 GHMP kinase, C-terminal domain M28_RS03500 IPR006204 GHMP kinase N-terminal domain M28_RS03500 IPR006206 Mevalonate/galactokinase M28_RS03500 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS03500 IPR019539 Galactokinase galactose-binding domain M28_RS03500 IPR019741 Galactokinase, conserved site M28_RS03500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS03500 IPR036554 GHMP kinase, C-terminal domain superfamily M28_RS03500 IPR022963 Galactokinase, bacterial M28_RS03510 IPR013750 GHMP kinase, C-terminal domain M28_RS03510 IPR006204 GHMP kinase N-terminal domain M28_RS03510 IPR035102 Phosphomevalonate kinase M28_RS03510 IPR005917 Phosphomevalonate kinase, bacteria M28_RS03510 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS03510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS03510 IPR036554 GHMP kinase, C-terminal domain superfamily M28_RS03515 IPR013785 Aldolase-type TIM barrel M28_RS03515 IPR000262 FMN-dependent dehydrogenase M28_RS03515 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent M28_RS03520 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II M28_RS03520 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type M28_RS03520 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily M28_RS03520 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily M28_RS03520 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily M28_RS03520 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site M28_RS03525 IPR016039 Thiolase-like M28_RS03525 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic M28_RS03525 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal M28_RS03525 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain M28_RS03530 IPR000398 Thymidylate synthase M28_RS03530 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain M28_RS03530 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily M28_RS03530 IPR020940 Thymidylate synthase, active site M28_RS03535 IPR012259 Dihydrofolate reductase M28_RS03535 IPR017925 Dihydrofolate reductase conserved site M28_RS03535 IPR024072 Dihydrofolate reductase-like domain superfamily M28_RS03535 IPR001796 Dihydrofolate reductase domain M28_RS03545 IPR004487 Clp protease, ATP-binding subunit ClpX M28_RS03545 IPR003593 AAA+ ATPase domain M28_RS03545 IPR010603 Zinc finger, ClpX C4-type M28_RS03545 IPR003959 ATPase, AAA-type, core M28_RS03545 IPR038366 Zinc finger, ClpX C4-type superfamily M28_RS03545 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03545 IPR019489 Clp ATPase, C-terminal M28_RS03550 IPR005225 Small GTP-binding protein domain M28_RS03550 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03550 IPR006073 GTP binding domain M28_RS03550 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC M28_RS03550 IPR030393 EngB-type guanine nucleotide-binding (G) domain M28_RS03560 IPR001270 ClpA/B family M28_RS03560 IPR028299 ClpA/B, conserved site 2 M28_RS03560 IPR041546 ClpA/ClpB, AAA lid domain M28_RS03560 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03560 IPR003593 AAA+ ATPase domain M28_RS03560 IPR003959 ATPase, AAA-type, core M28_RS03560 IPR019489 Clp ATPase, C-terminal M28_RS03565 IPR004788 Ribose 5-phosphate isomerase, type A M28_RS03565 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup M28_RS03565 IPR037171 NagB/RpiA transferase-like M28_RS03570 IPR006124 Metalloenzyme M28_RS03570 IPR010045 Phosphopentomutase M28_RS03570 IPR017850 Alkaline-phosphatase-like, core domain superfamily M28_RS03570 IPR024052 Phosphopentomutase DeoB cap domain superfamily M28_RS03575 IPR036249 Thioredoxin-like superfamily M28_RS03575 IPR006659 Arsenate reductase M28_RS03575 IPR006660 Arsenate reductase-like M28_RS03580 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific M28_RS03580 IPR035994 Nucleoside phosphorylase superfamily M28_RS03580 IPR011268 Purine nucleoside phosphorylase M28_RS03580 IPR018099 Purine phosphorylase, family 2, conserved site M28_RS03580 IPR000845 Nucleoside phosphorylase domain M28_RS03585 IPR035994 Nucleoside phosphorylase superfamily M28_RS03585 IPR000845 Nucleoside phosphorylase domain M28_RS03585 IPR018016 Nucleoside phosphorylase, conserved site M28_RS03585 IPR004402 Purine nucleoside phosphorylase DeoD-type M28_RS03595 IPR000847 Transcription regulator HTH, LysR M28_RS03595 IPR036390 Winged helix DNA-binding domain superfamily M28_RS03595 IPR005119 LysR, substrate-binding M28_RS03595 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain M28_RS03595 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS03605 IPR013785 Aldolase-type TIM barrel M28_RS03605 IPR011060 Ribulose-phosphate binding barrel M28_RS03605 IPR001754 Orotidine 5'-phosphate decarboxylase domain M28_RS03605 IPR018089 Orotidine 5'-phosphate decarboxylase, active site M28_RS03605 IPR014732 Orotidine 5'-phosphate decarboxylase M28_RS03610 IPR023031 Orotate phosphoribosyltransferase M28_RS03610 IPR004467 Orotate phosphoribosyl transferase domain M28_RS03610 IPR000836 Phosphoribosyltransferase domain M28_RS03610 IPR029057 Phosphoribosyltransferase-like M28_RS03615 IPR023631 Amidase signature domain M28_RS03615 IPR036928 Amidase signature (AS) superfamily M28_RS03615 IPR020556 Amidase, conserved site M28_RS03615 IPR000120 Amidase M28_RS03620 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M28_RS03620 IPR018313 Solute-binding protein family 3, conserved site M28_RS03620 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M28_RS03625 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M28_RS03625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS03625 IPR035906 MetI-like superfamily M28_RS03630 IPR002043 Uracil-DNA glycosylase family 1 M28_RS03630 IPR018085 Uracil-DNA glycosylase, active site M28_RS03630 IPR036895 Uracil-DNA glycosylase-like domain superfamily M28_RS03630 IPR005122 Uracil-DNA glycosylase-like M28_RS03635 IPR011059 Metal-dependent hydrolase, composite domain superfamily M28_RS03635 IPR032466 Metal-dependent hydrolase M28_RS03635 IPR004722 Dihydroorotase M28_RS03635 IPR002195 Dihydroorotase, conserved site M28_RS03635 IPR006680 Amidohydrolase-related M28_RS03640 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY M28_RS03645 IPR018522 DNA topoisomerase, type IIA, conserved site M28_RS03645 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal M28_RS03645 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 M28_RS03645 IPR001241 DNA topoisomerase, type IIA M28_RS03645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS03645 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes M28_RS03645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS03645 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS03645 IPR002288 DNA gyrase B subunit, C-terminal M28_RS03645 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M28_RS03645 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS03645 IPR006171 TOPRIM domain M28_RS03650 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily M28_RS03650 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat M28_RS03650 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M28_RS03650 IPR005741 DNA topoisomerase IV subunit A, Gram-positive M28_RS03650 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta M28_RS03650 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal M28_RS03650 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M28_RS03655 IPR033939 Branched-chain aminotransferase M28_RS03655 IPR001544 Aminotransferase class IV M28_RS03655 IPR018300 Aminotransferase, class IV, conserved site M28_RS03655 IPR036038 Aminotransferase-like, PLP-dependent enzymes M28_RS03655 IPR005786 Branched-chain amino acid aminotransferase II M28_RS03675 IPR012340 Nucleic acid-binding, OB-fold M28_RS03675 IPR022967 RNA-binding domain, S1 M28_RS03675 IPR003029 S1 domain M28_RS03690 IPR022111 Rhodanase, C-terminal M28_RS03690 IPR036873 Rhodanese-like domain superfamily M28_RS03690 IPR001763 Rhodanese-like domain M28_RS03690 IPR020936 Uncharacterised protein family UPF0176 M28_RS03690 IPR040503 UPF0176, acylphosphatase-like domain M28_RS03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03715 IPR018022 IPP transferase M28_RS03715 IPR039657 Dimethylallyltransferase M28_RS03720 IPR030394 HflX-type guanine nucleotide-binding (G) domain M28_RS03720 IPR042108 GTPase HflX, N-terminal domain superfamily M28_RS03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03720 IPR025121 GTPase HflX, N-terminal M28_RS03720 IPR016496 GTPase HflX M28_RS03720 IPR006073 GTP binding domain M28_RS03720 IPR032305 GTP-binding protein, middle domain M28_RS03725 IPR000766 Galactose-1-phosphate uridyl transferase, class II M28_RS03725 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site M28_RS03725 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal M28_RS03725 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal M28_RS03730 IPR013471 Ribonuclease Z/BN M28_RS03730 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS03730 IPR001279 Metallo-beta-lactamase M28_RS03735 IPR036291 NAD(P)-binding domain superfamily M28_RS03735 IPR020904 Short-chain dehydrogenase/reductase, conserved site M28_RS03735 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS03740 IPR003156 DHHA1 domain M28_RS03740 IPR041122 RecJ, OB domain M28_RS03740 IPR004610 Bacterial RecJ exonuclease M28_RS03740 IPR038763 DHH phosphoesterase superfamily M28_RS03740 IPR001667 DDH domain M28_RS03740 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal M28_RS03745 IPR005764 Adenine phosphoribosyl transferase M28_RS03745 IPR029057 Phosphoribosyltransferase-like M28_RS03745 IPR000836 Phosphoribosyltransferase domain M28_RS03755 IPR004035 Endonuclease III, iron-sulphur binding site M28_RS03755 IPR003265 HhH-GPD domain M28_RS03755 IPR011257 DNA glycosylase M28_RS03755 IPR000445 Helix-hairpin-helix motif M28_RS03755 IPR004036 Endonuclease III-like, conserved site-2 M28_RS03755 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif M28_RS03755 IPR005759 Endonuclease III M28_RS03755 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M28_RS03760 IPR006901 tRNA methyltransferase TrmK M28_RS03760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS03765 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M28_RS03765 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily M28_RS03770 IPR006076 FAD dependent oxidoreductase M28_RS03770 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS03775 IPR005835 Nucleotidyl transferase domain M28_RS03775 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form M28_RS03775 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS03780 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related M28_RS03780 IPR014710 RmlC-like jelly roll fold M28_RS03780 IPR011051 RmlC-like cupin domain superfamily M28_RS03785 IPR005888 dTDP-glucose 4,6-dehydratase M28_RS03785 IPR036291 NAD(P)-binding domain superfamily M28_RS03785 IPR016040 NAD(P)-binding domain M28_RS03790 IPR015797 NUDIX hydrolase-like domain superfamily M28_RS03790 IPR003562 Mutator MutX protein M28_RS03790 IPR020084 NUDIX hydrolase, conserved site M28_RS03790 IPR000086 NUDIX hydrolase domain M28_RS03795 IPR002549 Transmembrane protein TqsA-like M28_RS03800 IPR019734 Tetratricopeptide repeat M28_RS03800 IPR013026 Tetratricopeptide repeat-containing domain M28_RS03800 IPR011990 Tetratricopeptide-like helical domain superfamily M28_RS03805 IPR008532 NFACT, RNA-binding domain M28_RS03825 IPR017871 ABC transporter, conserved site M28_RS03825 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03825 IPR003593 AAA+ ATPase domain M28_RS03825 IPR015861 ABC transporter, ribose import, RbsA M28_RS03825 IPR003439 ABC transporter-like M28_RS03830 IPR042173 Ribonuclease J, domain 2 M28_RS03830 IPR030854 Ribonuclease J, bacteria M28_RS03830 IPR041636 Ribonuclease J, C-terminal M28_RS03830 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS03830 IPR004613 Ribonuclease J M28_RS03830 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain M28_RS03830 IPR001279 Metallo-beta-lactamase M28_RS03835 IPR000801 Putative esterase M28_RS03835 IPR029058 Alpha/Beta hydrolase fold M28_RS03845 IPR017871 ABC transporter, conserved site M28_RS03845 IPR003593 AAA+ ATPase domain M28_RS03845 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03845 IPR032524 ABC transporter Uup, C-terminal M28_RS03845 IPR032781 ABC-transporter extension domain M28_RS03845 IPR003439 ABC transporter-like M28_RS03845 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M28_RS03850 IPR029061 Thiamin diphosphate-binding fold M28_RS03850 IPR001017 Dehydrogenase, E1 component M28_RS03855 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M28_RS03855 IPR033248 Transketolase, C-terminal domain M28_RS03855 IPR000089 Biotin/lipoyl attachment M28_RS03855 IPR027110 Pyruvate dehydrogenase E1 component subunit beta M28_RS03855 IPR011053 Single hybrid motif M28_RS03855 IPR029061 Thiamin diphosphate-binding fold M28_RS03855 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M28_RS03855 IPR005475 Transketolase-like, pyrimidine-binding domain M28_RS03860 IPR004167 Peripheral subunit-binding domain M28_RS03860 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M28_RS03860 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain M28_RS03860 IPR000089 Biotin/lipoyl attachment M28_RS03860 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M28_RS03860 IPR036625 E3-binding domain superfamily M28_RS03860 IPR011053 Single hybrid motif M28_RS03860 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex M28_RS03870 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS03870 IPR023753 FAD/NAD(P)-binding domain M28_RS03870 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M28_RS03870 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M28_RS03870 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M28_RS03870 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M28_RS03870 IPR006258 Dihydrolipoamide dehydrogenase M28_RS03880 IPR011013 Galactose mutarotase-like domain superfamily M28_RS03880 IPR003159 Polysaccharide lyase family 8, central domain M28_RS03880 IPR004103 Polysaccharide lyase family 8, C-terminal M28_RS03880 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical M28_RS03880 IPR011071 Polysaccharide lyase family 8-like, C-terminal M28_RS03880 IPR019931 LPXTG cell wall anchor domain M28_RS03880 IPR014756 Immunoglobulin E-set M28_RS03880 IPR023295 Hyaluronate lyase, beta-sheet domain superfamily M28_RS03880 IPR014718 Glycoside hydrolase-type carbohydrate-binding M28_RS03880 IPR008979 Galactose-binding-like domain superfamily M28_RS03880 IPR008929 Chondroitin AC/alginate lyase M28_RS03880 IPR038970 Polysaccharide lyase 8 M28_RS03885 IPR004562 Lipoyltransferase/lipoate-protein ligase M28_RS03885 IPR019491 Lipoate protein ligase, C-terminal M28_RS03885 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M28_RS03890 IPR011698 CobB/CobQ-like glutamine amidotransferase M28_RS03890 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 M28_RS03890 IPR017929 CobB/CobQ glutamine amidotransferase M28_RS03890 IPR029062 Class I glutamine amidotransferase-like M28_RS03895 IPR013564 Domain of unknown function DUF1727 M28_RS03895 IPR013221 Mur ligase, central M28_RS03895 IPR036565 Mur-like, catalytic domain superfamily M28_RS03900 IPR003390 DNA integrity scanning protein, DisA, N-terminal M28_RS03900 IPR034701 Diadenylate cyclase CdaA M28_RS03900 IPR014046 Diadenylate cyclase M28_RS03900 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily M28_RS03910 IPR005841 Alpha-D-phosphohexomutase superfamily M28_RS03910 IPR016066 Alpha-D-phosphohexomutase, conserved site M28_RS03910 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M28_RS03910 IPR005843 Alpha-D-phosphohexomutase, C-terminal M28_RS03910 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M28_RS03910 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M28_RS03910 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M28_RS03910 IPR006352 Phosphoglucosamine mutase, bacterial type M28_RS03910 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M28_RS03920 IPR023404 Radical SAM, alpha/beta horseshoe M28_RS03920 IPR007197 Radical SAM M28_RS03920 IPR004559 Heme chaperone HemW-like M28_RS03920 IPR010723 HemN, C-terminal M28_RS03920 IPR006638 Elp3/MiaB/NifB M28_RS03920 IPR034505 Anaerobic coproporphyrinogen-III oxidase M28_RS03930 IPR036412 HAD-like superfamily M28_RS03930 IPR006357 HAD-superfamily hydrolase, subfamily IIA M28_RS03930 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 M28_RS03930 IPR023214 HAD superfamily M28_RS03940 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe M28_RS03940 IPR003615 HNH nuclease M28_RS03940 IPR032237 CRISPR-associated endonuclease Cas9, PAM-interacting domain M28_RS03940 IPR028629 CRISPR-associated endonuclease Cas9 M28_RS03940 IPR032239 CRISPR-associated endonuclease Cas9, bridge helix M28_RS03940 IPR033114 Cas9-type HNH domain M28_RS03945 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain M28_RS03945 IPR002729 CRISPR-associated protein Cas1 M28_RS03945 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain M28_RS03945 IPR019855 CRISPR-associated protein Cas1, NMENI subtype M28_RS03950 IPR021127 CRISPR-associated endonuclease Cas2 M28_RS03950 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 M28_RS03955 IPR038600 CRISPR-associated protein Csn2 superfamily M28_RS03955 IPR010146 CRISPR-associated protein, Csn2-type M28_RS03960 IPR002559 Transposase, IS4-like M28_RS03960 IPR032806 H repeat-associated protein, N-terminal M28_RS03970 IPR038363 LepA, C-terminal domain superfamily M28_RS03970 IPR000640 Elongation factor EFG, domain V-like M28_RS03970 IPR004161 Translation elongation factor EFTu-like, domain 2 M28_RS03970 IPR031157 Tr-type G domain, conserved site M28_RS03970 IPR035647 EF-G domain III/V-like M28_RS03970 IPR035654 Elongation factor 4, domain IV M28_RS03970 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS03970 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS03970 IPR005225 Small GTP-binding protein domain M28_RS03970 IPR013842 GTP-binding protein LepA, C-terminal M28_RS03970 IPR000795 Transcription factor, GTP-binding domain M28_RS03970 IPR041095 Elongation Factor G, domain II M28_RS03970 IPR006297 Elongation factor 4 M28_RS03975 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS03975 IPR019931 LPXTG cell wall anchor domain M28_RS03975 IPR019950 M protein-type anchor domain M28_RS03975 IPR003345 M protein repeat M28_RS03975 IPR005877 YSIRK Gram-positive signal peptide M28_RS03980 IPR011057 Mss4-like superfamily M28_RS03980 IPR002579 Peptide methionine sulphoxide reductase MrsB M28_RS03980 IPR028427 Peptide methionine sulfoxide reductase M28_RS03985 IPR018383 Uncharacterised protein family UPF0324, prokaryote M28_RS03995 IPR004720 Phosphotransferase system, sorbose subfamily IIB component M28_RS03995 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily M28_RS04000 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit M28_RS04005 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component M28_RS04010 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS04010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS04010 IPR010559 Signal transduction histidine kinase, internal region M28_RS04015 IPR018060 DNA binding HTH domain, AraC-type M28_RS04015 IPR001789 Signal transduction response regulator, receiver domain M28_RS04015 IPR009057 Homeobox-like domain superfamily M28_RS04015 IPR011006 CheY-like superfamily M28_RS04025 IPR015590 Aldehyde dehydrogenase domain M28_RS04025 IPR016162 Aldehyde dehydrogenase, N-terminal M28_RS04025 IPR016161 Aldehyde/histidinol dehydrogenase M28_RS04025 IPR016163 Aldehyde dehydrogenase, C-terminal M28_RS04025 IPR016160 Aldehyde dehydrogenase, cysteine active site M28_RS04030 IPR001162 UvrC family homology region M28_RS04030 IPR004791 UvrABC system, subunit C M28_RS04030 IPR036876 UVR domain superfamily M28_RS04030 IPR001943 UVR domain M28_RS04030 IPR010994 RuvA domain 2-like M28_RS04030 IPR035901 GIY-YIG endonuclease superfamily M28_RS04030 IPR000305 GIY-YIG endonuclease M28_RS04030 IPR038476 UvrC homology region 2 superfamily M28_RS04035 IPR029479 Nitroreductase M28_RS04035 IPR000415 Nitroreductase-like M28_RS04040 IPR036264 Bacterial exopeptidase dimerisation domain M28_RS04040 IPR002933 Peptidase M20 M28_RS04040 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M28_RS04040 IPR010964 Peptidase M20A, peptidase V-related M28_RS04045 IPR005225 Small GTP-binding protein domain M28_RS04045 IPR027368 tRNA modification GTPase MnmE domain 2 M28_RS04045 IPR004520 tRNA modification GTPase MnmE M28_RS04045 IPR025867 MnmE, helical domain M28_RS04045 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04045 IPR006073 GTP binding domain M28_RS04045 IPR018948 GTP-binding protein TrmE, N-terminal M28_RS04045 IPR031168 TrmE-type guanine nucleotide-binding domain M28_RS04045 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 M28_RS04050 IPR001790 Ribosomal protein L10P M28_RS04050 IPR002363 Ribosomal protein L10, eubacterial, conserved site M28_RS04050 IPR022973 Ribosomal protein L10 M28_RS04055 IPR008932 Ribosomal protein L7/L12, oligomerisation M28_RS04055 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily M28_RS04055 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M28_RS04055 IPR000206 Ribosomal protein L7/L12 M28_RS04055 IPR013823 Ribosomal protein L7/L12, C-terminal M28_RS04085 IPR001789 Signal transduction response regulator, receiver domain M28_RS04085 IPR011006 CheY-like superfamily M28_RS04085 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04085 IPR039420 Transcriptional regulatory protein WalR-like M28_RS04085 IPR001867 OmpR/PhoB-type DNA-binding domain M28_RS04090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS04090 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS04090 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB M28_RS04090 IPR005467 Histidine kinase domain M28_RS04090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M28_RS04090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M28_RS04095 IPR006079 Lantibiotic, Type A, Bacillales-type M28_RS04100 IPR017871 ABC transporter, conserved site M28_RS04100 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04100 IPR003439 ABC transporter-like M28_RS04100 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS04100 IPR039421 Type I protein exporter M28_RS04100 IPR003593 AAA+ ATPase domain M28_RS04100 IPR011527 ABC transporter type 1, transmembrane domain M28_RS04105 IPR033889 Type I lantibiotic biosynthesis cyclase M28_RS04105 IPR007822 Lanthionine synthetase C-like M28_RS04105 IPR020452 Subtilin biosynthesis protein SpaC M28_RS04110 IPR006827 Lantibiotic dehydratase, N-terminal M28_RS04110 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain M28_RS04115 IPR003593 AAA+ ATPase domain M28_RS04115 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04115 IPR017871 ABC transporter, conserved site M28_RS04115 IPR003439 ABC transporter-like M28_RS04115 IPR022501 Gallidermin ABC transporter, ATP-binding subunit M28_RS04130 IPR001387 Cro/C1-type helix-turn-helix domain M28_RS04130 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS04150 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M28_RS04150 IPR015956 Penicillin-binding protein, C-terminal domain superfamily M28_RS04150 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal M28_RS04150 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily M28_RS04150 IPR012338 Beta-lactamase/transpeptidase-like M28_RS04150 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M28_RS04160 IPR001645 Folylpolyglutamate synthetase M28_RS04160 IPR036565 Mur-like, catalytic domain superfamily M28_RS04160 IPR018109 Folylpolyglutamate synthetase, conserved site M28_RS04160 IPR036615 Mur ligase, C-terminal domain superfamily M28_RS04160 IPR004101 Mur ligase, C-terminal M28_RS04160 IPR013221 Mur ligase, central M28_RS04165 IPR018234 GTP cyclohydrolase I, conserved site M28_RS04165 IPR020602 GTP cyclohydrolase I domain M28_RS04165 IPR001474 GTP cyclohydrolase I M28_RS04170 IPR000489 Pterin-binding domain M28_RS04170 IPR011005 Dihydropteroate synthase-like M28_RS04170 IPR006390 Dihydropteroate synthase M28_RS04175 IPR006157 Dihydroneopterin aldolase/epimerase domain M28_RS04175 IPR006156 Dihydroneopterin aldolase M28_RS04180 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK M28_RS04180 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily M28_RS04185 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily M28_RS04185 IPR006094 FAD linked oxidase, N-terminal M28_RS04185 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal M28_RS04185 IPR016169 FAD-binding, type PCMH, subdomain 2 M28_RS04185 IPR016167 FAD-binding, type PCMH, subdomain 1 M28_RS04185 IPR036318 FAD-binding, type PCMH-like superfamily M28_RS04185 IPR016166 FAD-binding domain, PCMH-type M28_RS04185 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase M28_RS04190 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04190 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit M28_RS04190 IPR017871 ABC transporter, conserved site M28_RS04190 IPR013611 Transport-associated OB, type 2 M28_RS04190 IPR008995 Molybdate/tungstate binding, C-terminal M28_RS04190 IPR003593 AAA+ ATPase domain M28_RS04190 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA M28_RS04190 IPR003439 ABC transporter-like M28_RS04195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS04195 IPR035906 MetI-like superfamily M28_RS04200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS04200 IPR035906 MetI-like superfamily M28_RS04205 IPR006059 Bacterial extracellular solute-binding protein M28_RS04205 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein M28_RS04210 IPR001789 Signal transduction response regulator, receiver domain M28_RS04210 IPR024187 Signal transduction response regulator, citrate/malate metabolism M28_RS04210 IPR011006 CheY-like superfamily M28_RS04215 IPR039506 SpoOB, alpha-helical domain M28_RS04215 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB M28_RS04215 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS04215 IPR029151 Periplasmic sensor-like domain superfamily M28_RS04215 IPR033463 Single cache domain 3 M28_RS04215 IPR013767 PAS fold M28_RS04215 IPR000014 PAS domain M28_RS04215 IPR005467 Histidine kinase domain M28_RS04215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS04215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS04220 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes M28_RS04220 IPR004679 2-hydroxycarboxylate transporter M28_RS04225 IPR012302 Malic enzyme, NAD-binding M28_RS04225 IPR037062 Malic enzyme, N-terminal domain superfamily M28_RS04225 IPR036291 NAD(P)-binding domain superfamily M28_RS04225 IPR015884 Malic enzyme, conserved site M28_RS04225 IPR002912 ACT domain M28_RS04225 IPR001891 Malic oxidoreductase M28_RS04225 IPR012301 Malic enzyme, N-terminal domain M28_RS04230 IPR011032 GroES-like superfamily M28_RS04230 IPR036291 NAD(P)-binding domain superfamily M28_RS04230 IPR013149 Alcohol dehydrogenase, C-terminal M28_RS04230 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M28_RS04230 IPR013154 Alcohol dehydrogenase, N-terminal M28_RS04235 IPR005519 Acid phosphatase, class B-like M28_RS04235 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA M28_RS04235 IPR036412 HAD-like superfamily M28_RS04235 IPR023214 HAD superfamily M28_RS04240 IPR023861 Chloride channel, ClcA M28_RS04240 IPR001807 Chloride channel, voltage gated M28_RS04240 IPR014743 Chloride channel, core M28_RS04250 IPR002549 Transmembrane protein TqsA-like M28_RS04255 IPR010994 RuvA domain 2-like M28_RS04255 IPR020891 Uncharacterised protein family UPF0758, conserved site M28_RS04255 IPR001405 Uncharacterised protein family UPF0758 M28_RS04255 IPR025657 RadC-like JAB domain M28_RS04255 IPR037518 MPN domain M28_RS04260 IPR011697 Peptidase C26 M28_RS04260 IPR017926 Glutamine amidotransferase M28_RS04260 IPR029062 Class I glutamine amidotransferase-like M28_RS04265 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04265 IPR003781 CoA-binding M28_RS04265 IPR036390 Winged helix DNA-binding domain superfamily M28_RS04265 IPR022876 Redox-sensing transcriptional repressor Rex M28_RS04265 IPR009718 Rex DNA-binding, C-terminal domain M28_RS04265 IPR036291 NAD(P)-binding domain superfamily M28_RS04275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS04275 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS04275 IPR016454 Cysteine desulfurase M28_RS04275 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M28_RS04275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS04275 IPR000192 Aminotransferase class V domain M28_RS04280 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site M28_RS04280 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain M28_RS04280 IPR029057 Phosphoribosyltransferase-like M28_RS04280 IPR005946 Ribose-phosphate pyrophosphokinase M28_RS04280 IPR000836 Phosphoribosyltransferase domain M28_RS04280 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type M28_RS04290 IPR007685 RelA/SpoT M28_RS04295 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal M28_RS04295 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M28_RS04295 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal M28_RS04295 IPR002504 NAD kinase M28_RS04300 IPR006145 Pseudouridine synthase, RsuA/RluA M28_RS04300 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS04300 IPR006225 Pseudouridine synthase, RluC/RluD M28_RS04300 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M28_RS04300 IPR002942 RNA-binding S4 domain M28_RS04300 IPR036986 RNA-binding S4 domain superfamily M28_RS04305 IPR042113 Phosphate acetyltransferase, domain 1 M28_RS04305 IPR042112 Phosphate acetyltransferase, domain 2 M28_RS04305 IPR002505 Phosphate acetyl/butaryl transferase M28_RS04305 IPR004614 Phosphate acetyltransferase M28_RS04305 IPR012147 Phosphate acetyl/butyryltransferase M28_RS04310 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS04310 IPR036291 NAD(P)-binding domain superfamily M28_RS04310 IPR020904 Short-chain dehydrogenase/reductase, conserved site M28_RS04320 IPR003593 AAA+ ATPase domain M28_RS04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04320 IPR005892 Glycine betaine transport ATP-binding subunit M28_RS04320 IPR000644 CBS domain M28_RS04320 IPR017871 ABC transporter, conserved site M28_RS04320 IPR003439 ABC transporter-like M28_RS04325 IPR035906 MetI-like superfamily M28_RS04325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS04330 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M28_RS04330 IPR001093 IMP dehydrogenase/GMP reductase M28_RS04330 IPR005994 Guanosine monophosphate reductase, type2 M28_RS04330 IPR013785 Aldolase-type TIM barrel M28_RS04340 IPR010079 Xanthine phosphoribosyltransferase M28_RS04340 IPR029057 Phosphoribosyltransferase-like M28_RS04340 IPR000836 Phosphoribosyltransferase domain M28_RS04345 IPR006043 Xanthine/uracil/vitamin C permease M28_RS04345 IPR017588 Uric acid permease UacT-like M28_RS04345 IPR006042 Xanthine/uracil permease M28_RS04350 IPR003374 ApbE-like superfamily M28_RS04350 IPR042159 Flavin-trafficking protein ApbE M28_RS04350 IPR024932 Flavin transferase ApbE M28_RS04355 IPR004370 4-oxalocrotonate tautomerase M28_RS04355 IPR014347 Tautomerase/MIF superfamily M28_RS04360 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04360 IPR020633 Thymidine kinase, conserved site M28_RS04360 IPR001267 Thymidine kinase M28_RS04365 IPR000352 Peptide chain release factor class I M28_RS04365 IPR004373 Peptide chain release factor 1 M28_RS04365 IPR005139 Peptide chain release factor M28_RS04370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS04370 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific M28_RS04370 IPR007848 Methyltransferase small domain M28_RS04370 IPR004556 Methyltransferase HemK-like M28_RS04370 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M28_RS04385 IPR039429 Serine hydroxymethyltransferase-like domain M28_RS04385 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site M28_RS04385 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS04385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS04385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS04385 IPR001085 Serine hydroxymethyltransferase M28_RS04395 IPR023346 Lysozyme-like domain superfamily M28_RS04400 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04400 IPR011527 ABC transporter type 1, transmembrane domain M28_RS04400 IPR003593 AAA+ ATPase domain M28_RS04400 IPR017871 ABC transporter, conserved site M28_RS04400 IPR003439 ABC transporter-like M28_RS04400 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS04405 IPR011527 ABC transporter type 1, transmembrane domain M28_RS04405 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS04405 IPR003439 ABC transporter-like M28_RS04405 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04405 IPR039421 Type I protein exporter M28_RS04405 IPR003593 AAA+ ATPase domain M28_RS04410 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M28_RS04410 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M28_RS04410 IPR023753 FAD/NAD(P)-binding domain M28_RS04410 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS04415 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal M28_RS04415 IPR001236 Lactate/malate dehydrogenase, N-terminal M28_RS04415 IPR022383 Lactate/malate dehydrogenase, C-terminal M28_RS04415 IPR018177 L-lactate dehydrogenase, active site M28_RS04415 IPR001557 L-lactate/malate dehydrogenase M28_RS04415 IPR011304 L-lactate dehydrogenase M28_RS04415 IPR036291 NAD(P)-binding domain superfamily M28_RS04420 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal M28_RS04420 IPR005743 DNA gyrase, subunit A M28_RS04420 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily M28_RS04420 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M28_RS04420 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M28_RS04420 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta M28_RS04420 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat M28_RS04425 IPR005754 Sortase family M28_RS04425 IPR023365 Sortase domain superfamily M28_RS04425 IPR042007 Sortase A M28_RS04430 IPR037523 Vicinal oxygen chelate (VOC) domain M28_RS04430 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M28_RS04430 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M28_RS04430 IPR037478 YwkD-like domain M28_RS04445 IPR001206 Diacylglycerol kinase, catalytic domain M28_RS04445 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal M28_RS04445 IPR005218 Diacylglycerol/lipid kinase M28_RS04445 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M28_RS04450 IPR005744 Hly-III M28_RS04450 IPR004254 AdipoR/Haemolysin-III-related M28_RS04460 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily M28_RS04460 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M28_RS04460 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04460 IPR006073 GTP binding domain M28_RS04460 IPR019991 GTP-binding protein, ribosome biogenesis M28_RS04460 IPR016478 GTPase, MTG1 M28_RS04465 IPR036397 Ribonuclease H superfamily M28_RS04465 IPR012337 Ribonuclease H-like superfamily M28_RS04465 IPR024567 Ribonuclease HII/HIII domain M28_RS04465 IPR001352 Ribonuclease HII/HIII M28_RS04465 IPR022898 Ribonuclease HII M28_RS04470 IPR003488 DNA recombination-mediator protein A M28_RS04470 IPR041104 DNA processing protein A, sterile alpha motif domain M28_RS04475 IPR034149 DNA topoisomerase 1, TOPRIM domain M28_RS04475 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M28_RS04475 IPR028612 DNA topoisomerase I, type IA M28_RS04475 IPR005733 DNA topoisomerase I, bacterial-type M28_RS04475 IPR000380 DNA topoisomerase, type IA M28_RS04475 IPR003601 DNA topoisomerase, type IA, domain 2 M28_RS04475 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M28_RS04475 IPR023405 DNA topoisomerase, type IA, core domain M28_RS04475 IPR003602 DNA topoisomerase, type IA, DNA-binding domain M28_RS04475 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M28_RS04475 IPR013498 DNA topoisomerase, type IA, zn finger M28_RS04475 IPR013497 DNA topoisomerase, type IA, central M28_RS04475 IPR006171 TOPRIM domain M28_RS04475 IPR023406 DNA topoisomerase, type IA, active site M28_RS04495 IPR036291 NAD(P)-binding domain superfamily M28_RS04495 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M28_RS04495 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M28_RS04495 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M28_RS04495 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M28_RS04510 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS04510 IPR020595 MnmG-related, conserved site M28_RS04510 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related M28_RS04510 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO M28_RS04515 IPR005776 Oxaloacetate decarboxylase, alpha subunit M28_RS04515 IPR000891 Pyruvate carboxyltransferase M28_RS04515 IPR003379 Carboxylase, conserved domain M28_RS04515 IPR000089 Biotin/lipoyl attachment M28_RS04515 IPR001882 Biotin-binding site M28_RS04515 IPR013785 Aldolase-type TIM barrel M28_RS04515 IPR011053 Single hybrid motif M28_RS04525 IPR011053 Single hybrid motif M28_RS04525 IPR000089 Biotin/lipoyl attachment M28_RS04525 IPR001882 Biotin-binding site M28_RS04530 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit M28_RS04535 IPR002736 Triphosphoribosyl-dephospho-CoA protein M28_RS04535 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG M28_RS04545 IPR014738 Citrate transporter M28_RS04545 IPR004680 Citrate transporter-like domain M28_RS04555 IPR001882 Biotin-binding site M28_RS04555 IPR000089 Biotin/lipoyl attachment M28_RS04555 IPR011053 Single hybrid motif M28_RS04560 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit M28_RS04565 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein M28_RS04565 IPR006495 Citrate lyase acyl carrier protein CitD M28_RS04570 IPR006475 Citrate lyase, beta subunit, bacteria M28_RS04570 IPR005000 HpcH/HpaI aldolase/citrate lyase domain M28_RS04570 IPR011206 Citrate lyase beta subunit-like M28_RS04570 IPR040442 Pyruvate kinase-like domain superfamily M28_RS04570 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M28_RS04575 IPR006472 Citrate lyase, alpha subunit M28_RS04575 IPR037171 NagB/RpiA transferase-like M28_RS04580 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase M28_RS04585 IPR000891 Pyruvate carboxyltransferase M28_RS04585 IPR011053 Single hybrid motif M28_RS04585 IPR003379 Carboxylase, conserved domain M28_RS04585 IPR000089 Biotin/lipoyl attachment M28_RS04585 IPR001882 Biotin-binding site M28_RS04585 IPR013785 Aldolase-type TIM barrel M28_RS04585 IPR005776 Oxaloacetate decarboxylase, alpha subunit M28_RS04590 IPR000182 GNAT domain M28_RS04590 IPR005216 Citrate lyase ligase M28_RS04590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS04590 IPR004821 Cytidyltransferase-like domain M28_RS04590 IPR013166 Citrate lyase ligase, C-terminal M28_RS04590 IPR016181 Acyl-CoA N-acyltransferase M28_RS04600 IPR010998 Integrase/recombinase, N-terminal M28_RS04600 IPR002104 Integrase, catalytic domain M28_RS04600 IPR023670 Tyrosine recombinase XerS M28_RS04600 IPR013762 Integrase-like, catalytic domain superfamily M28_RS04600 IPR011010 DNA breaking-rejoining enzyme, catalytic core M28_RS04600 IPR004107 Integrase, SAM-like, N-terminal M28_RS04610 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M28_RS04610 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M28_RS04610 IPR004780 Signal recognition particle protein M28_RS04610 IPR004125 Signal recognition particle, SRP54 subunit, M-domain M28_RS04610 IPR013822 Signal recognition particle SRP54, helical bundle M28_RS04610 IPR003593 AAA+ ATPase domain M28_RS04610 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily M28_RS04610 IPR022941 Signal recognition particle, SRP54 subunit M28_RS04610 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04615 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04615 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like M28_RS04615 IPR013324 RNA polymerase sigma factor, region 3/4-like M28_RS04620 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M28_RS04620 IPR000524 Transcription regulator HTH, GntR M28_RS04620 IPR011663 UbiC transcription regulator-associated M28_RS04620 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04620 IPR036390 Winged helix DNA-binding domain superfamily M28_RS04630 IPR022955 GMP synthase M28_RS04630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS04630 IPR022310 NAD/GMP synthase M28_RS04630 IPR025777 GMP synthetase ATP pyrophosphatase domain M28_RS04630 IPR004739 GMP synthase, glutamine amidotransferase M28_RS04630 IPR001674 GMP synthase, C-terminal M28_RS04630 IPR017926 Glutamine amidotransferase M28_RS04630 IPR029062 Class I glutamine amidotransferase-like M28_RS04640 IPR032781 ABC-transporter extension domain M28_RS04640 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04640 IPR003593 AAA+ ATPase domain M28_RS04640 IPR003439 ABC transporter-like M28_RS04640 IPR017871 ABC transporter, conserved site M28_RS04650 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase M28_RS04650 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase M28_RS04650 IPR013785 Aldolase-type TIM barrel M28_RS04650 IPR036206 Thiamin phosphate synthase superfamily M28_RS04650 IPR034291 Thiamine phosphate synthase M28_RS04650 IPR029056 Ribokinase-like M28_RS04650 IPR022998 Thiamine phosphate synthase/TenI M28_RS04655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS04655 IPR036390 Winged helix DNA-binding domain superfamily M28_RS04655 IPR004839 Aminotransferase, class I/classII M28_RS04655 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04655 IPR000524 Transcription regulator HTH, GntR M28_RS04655 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS04660 IPR001150 Glycine radical domain M28_RS04660 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic M28_RS04660 IPR005144 ATP-cone domain M28_RS04660 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M28_RS04665 IPR001736 Phospholipase D/Transphosphatidylase M28_RS04665 IPR025202 Phospholipase D-like domain M28_RS04665 IPR022924 Cardiolipin synthase M28_RS04670 IPR000559 Formate-tetrahydrofolate ligase, FTHFS M28_RS04670 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04670 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site M28_RS04675 IPR004562 Lipoyltransferase/lipoate-protein ligase M28_RS04675 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M28_RS04675 IPR019491 Lipoate protein ligase, C-terminal M28_RS04680 IPR026591 Sirtuin, catalytic core small domain superfamily M28_RS04680 IPR026590 Sirtuin family, catalytic core domain M28_RS04680 IPR029035 DHS-like NAD/FAD-binding domain superfamily M28_RS04685 IPR002589 Macro domain M28_RS04685 IPR035801 Protein-ADP-ribose hydrolase, macro domain M28_RS04690 IPR002930 Glycine cleavage system H-protein M28_RS04690 IPR033753 Glycine cleavage system H-protein/Simiate M28_RS04690 IPR011053 Single hybrid motif M28_RS04690 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M28_RS04695 IPR036661 Luciferase-like domain superfamily M28_RS04695 IPR019949 Luciferase family oxidoreductase, group 1 M28_RS04695 IPR011251 Luciferase-like domain M28_RS04700 IPR013785 Aldolase-type TIM barrel M28_RS04700 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M28_RS04705 IPR024897 Octanoyltransferase LipL M28_RS04705 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M28_RS04710 IPR035929 CoaB-like superfamily M28_RS04710 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC M28_RS04710 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal M28_RS04710 IPR036551 Flavin prenyltransferase-like M28_RS04710 IPR003382 Flavoprotein M28_RS04715 IPR003382 Flavoprotein M28_RS04715 IPR036551 Flavin prenyltransferase-like M28_RS04715 IPR011847 Phosphopantothenoylcysteine decarboxylase M28_RS04720 IPR024529 ECF transporter, substrate-specific component M28_RS04725 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M28_RS04725 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M28_RS04725 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M28_RS04725 IPR016066 Alpha-D-phosphohexomutase, conserved site M28_RS04725 IPR005841 Alpha-D-phosphohexomutase superfamily M28_RS04725 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M28_RS04725 IPR005843 Alpha-D-phosphohexomutase, C-terminal M28_RS04725 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M28_RS04730 IPR001851 ABC transporter, permease M28_RS04735 IPR001851 ABC transporter, permease M28_RS04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04740 IPR017871 ABC transporter, conserved site M28_RS04740 IPR003439 ABC transporter-like M28_RS04740 IPR003593 AAA+ ATPase domain M28_RS04745 IPR003760 ABC transporter substrate-binding protein PnrA-like M28_RS04745 IPR028082 Periplasmic binding protein-like I M28_RS04750 IPR016193 Cytidine deaminase-like M28_RS04750 IPR006262 Cytidine deaminase, homotetrameric M28_RS04750 IPR016192 APOBEC/CMP deaminase, zinc-binding M28_RS04750 IPR002125 Cytidine and deoxycytidylate deaminase domain M28_RS04755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS04755 IPR007848 Methyltransferase small domain M28_RS04760 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04760 IPR006083 Phosphoribulokinase/uridine kinase M28_RS04760 IPR004566 Pantothenate kinase M28_RS04765 IPR002583 Ribosomal protein S20 M28_RS04765 IPR036510 Ribosomal protein S20 superfamily M28_RS04770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M28_RS04770 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS04770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS04770 IPR005467 Histidine kinase domain M28_RS04770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M28_RS04770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS04775 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04775 IPR039420 Transcriptional regulatory protein WalR-like M28_RS04775 IPR001789 Signal transduction response regulator, receiver domain M28_RS04775 IPR001867 OmpR/PhoB-type DNA-binding domain M28_RS04775 IPR011006 CheY-like superfamily M28_RS04780 IPR024571 ERAP1-like C-terminal domain M28_RS04780 IPR042097 Aminopeptidase N-like , N-terminal M28_RS04780 IPR034016 Aminopeptidase N-type M28_RS04780 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase M28_RS04780 IPR014782 Peptidase M1, membrane alanine aminopeptidase M28_RS04790 IPR038078 PhoU-like domain superfamily M28_RS04790 IPR028366 Phosphate transport system protein PhoU M28_RS04790 IPR026022 PhoU domain M28_RS04795 IPR003593 AAA+ ATPase domain M28_RS04795 IPR017871 ABC transporter, conserved site M28_RS04795 IPR015850 ABC transporter, phosphate import, PstB M28_RS04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04795 IPR005670 Phosphate transport system permease protein 1 M28_RS04795 IPR003439 ABC transporter-like M28_RS04800 IPR017871 ABC transporter, conserved site M28_RS04800 IPR003439 ABC transporter-like M28_RS04800 IPR003593 AAA+ ATPase domain M28_RS04800 IPR015850 ABC transporter, phosphate import, PstB M28_RS04800 IPR005670 Phosphate transport system permease protein 1 M28_RS04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04805 IPR035906 MetI-like superfamily M28_RS04805 IPR005672 Phosphate transport system permease protein PstA M28_RS04805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS04810 IPR011864 Phosphate ABC transporter, permease protein PstC M28_RS04810 IPR035906 MetI-like superfamily M28_RS04810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS04815 IPR024370 PBP domain M28_RS04815 IPR011862 Phosphate binding protein M28_RS04820 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain M28_RS04820 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M28_RS04820 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal M28_RS04820 IPR023267 RNA (C5-cytosine) methyltransferase M28_RS04820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS04825 IPR020550 Inositol monophosphatase, conserved site M28_RS04825 IPR000760 Inositol monophosphatase-like M28_RS04825 IPR020583 Inositol monophosphatase, metal-binding site M28_RS04830 IPR007920 Protein of unknown function UPF0223 M28_RS04830 IPR023324 BH2638-like superfamily M28_RS04835 IPR023731 Regulatory protein Spx M28_RS04835 IPR036249 Thioredoxin-like superfamily M28_RS04835 IPR006504 Transcriptional regulator Spx/MgsR M28_RS04835 IPR006660 Arsenate reductase-like M28_RS04840 IPR004821 Cytidyltransferase-like domain M28_RS04840 IPR015864 FAD synthetase M28_RS04840 IPR002606 Riboflavin kinase, bacterial M28_RS04840 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic M28_RS04840 IPR023468 Riboflavin kinase M28_RS04840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS04840 IPR023465 Riboflavin kinase domain superfamily M28_RS04845 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS04845 IPR002501 Pseudouridine synthase II, N-terminal M28_RS04845 IPR014780 tRNA pseudouridine synthase II, TruB M28_RS04845 IPR032819 tRNA pseudouridylate synthase B, C-terminal M28_RS04870 IPR003593 AAA+ ATPase domain M28_RS04870 IPR003838 ABC transporter permease protein domain M28_RS04870 IPR025857 MacB-like periplasmic core domain M28_RS04870 IPR017911 ABC transporter, macrolide export, ATP-binding domain M28_RS04870 IPR003439 ABC transporter-like M28_RS04870 IPR017871 ABC transporter, conserved site M28_RS04870 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04885 IPR005531 Alkaline shock protein Asp23 M28_RS04890 IPR036629 YjbJ superfamily M28_RS04890 IPR008462 CsbD-like domain M28_RS04895 IPR005531 Alkaline shock protein Asp23 M28_RS04915 IPR034739 UvrD/AddA helicase, N-terminal M28_RS04915 IPR014016 UvrD-like helicase, ATP-binding domain M28_RS04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04915 IPR000212 DNA helicase, UvrD/REP type M28_RS04915 IPR014017 UvrD-like DNA helicase, C-terminal M28_RS04915 IPR013986 DExx box DNA helicase domain superfamily M28_RS04915 IPR005751 ATP-dependent DNA helicase PcrA M28_RS04920 IPR001463 Sodium:alanine symporter M28_RS04925 IPR002524 Cation efflux protein M28_RS04925 IPR036837 Cation efflux protein, cytoplasmic domain superfamily M28_RS04925 IPR027470 Cation efflux protein, cytoplasmic domain M28_RS04925 IPR027469 Cation efflux transmembrane domain superfamily M28_RS04930 IPR010860 CAMP factor M28_RS04935 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M28_RS04935 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M28_RS04935 IPR018313 Solute-binding protein family 3, conserved site M28_RS04935 IPR001320 Ionotropic glutamate receptor M28_RS04940 IPR003593 AAA+ ATPase domain M28_RS04940 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M28_RS04940 IPR003439 ABC transporter-like M28_RS04940 IPR017871 ABC transporter, conserved site M28_RS04940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS04945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS04945 IPR035906 MetI-like superfamily M28_RS04945 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M28_RS04950 IPR013987 PhnA protein, N-terminal M28_RS04950 IPR004624 PhnA protein M28_RS04950 IPR013988 PhnA protein, C-terminal M28_RS04955 IPR035466 GlmS/AgaS, SIS domain 1 M28_RS04955 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising M28_RS04955 IPR017932 Glutamine amidotransferase type 2 domain M28_RS04955 IPR035490 GlmS/FrlB, SIS domain 2 M28_RS04955 IPR001347 Sugar isomerase (SIS) M28_RS04955 IPR029055 Nucleophile aminohydrolases, N-terminal M28_RS04960 IPR019758 Peptidase S26A, signal peptidase I, conserved site M28_RS04960 IPR019533 Peptidase S26 M28_RS04960 IPR000223 Peptidase S26A, signal peptidase I M28_RS04960 IPR019757 Peptidase S26A, signal peptidase I, lysine active site M28_RS04960 IPR036286 LexA/Signal peptidase-like superfamily M28_RS04960 IPR019756 Peptidase S26A, signal peptidase I, serine active site M28_RS04965 IPR015806 Pyruvate kinase, insert domain superfamily M28_RS04965 IPR036918 Pyruvate kinase, C-terminal domain superfamily M28_RS04965 IPR015795 Pyruvate kinase, C-terminal M28_RS04965 IPR015793 Pyruvate kinase, barrel M28_RS04965 IPR011037 Pyruvate kinase-like, insert domain superfamily M28_RS04965 IPR040442 Pyruvate kinase-like domain superfamily M28_RS04965 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M28_RS04965 IPR001697 Pyruvate kinase M28_RS04965 IPR018209 Pyruvate kinase, active site M28_RS04970 IPR035966 Phosphofructokinase superfamily M28_RS04970 IPR000023 Phosphofructokinase domain M28_RS04970 IPR015912 Phosphofructokinase, conserved site M28_RS04970 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic M28_RS04970 IPR022953 ATP-dependent 6-phosphofructokinase M28_RS04970 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type M28_RS04975 IPR004805 DNA polymerase III, alpha subunit M28_RS04975 IPR016195 Polymerase/histidinol phosphatase-like M28_RS04975 IPR003141 Polymerase/histidinol phosphatase, N-terminal M28_RS04975 IPR004013 PHP domain M28_RS04975 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M28_RS04975 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M28_RS04975 IPR029460 DNA polymerase, helix-hairpin-helix motif M28_RS04975 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain M28_RS04975 IPR040982 DNA polymerase III alpha subunit finger domain M28_RS04980 IPR036390 Winged helix DNA-binding domain superfamily M28_RS04980 IPR000524 Transcription regulator HTH, GntR M28_RS04980 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS04985 IPR003593 AAA+ ATPase domain M28_RS04985 IPR003439 ABC transporter-like M28_RS04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05015 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain M28_RS05015 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial M28_RS05015 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold M28_RS05015 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site M28_RS05015 IPR008992 Enterotoxin M28_RS05015 IPR006177 Staphylococcal/streptococcal toxin, bacterial M28_RS05015 IPR016091 Superantigen toxin, C-terminal M28_RS05170 IPR035069 TTHA1013/TTHA0281-like M28_RS05170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS05170 IPR001387 Cro/C1-type helix-turn-helix domain M28_RS05170 IPR031807 HicB-like antitoxin of toxin-antitoxin system M28_RS05245 IPR014014 RNA helicase, DEAD-box type, Q motif M28_RS05245 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05245 IPR001650 Helicase, C-terminal M28_RS05245 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS05245 IPR011545 DEAD/DEAH box helicase domain M28_RS05355 IPR011833 Glycogen/starch/alpha-glucan phosphorylase M28_RS05355 IPR035090 Phosphorylase pyridoxal-phosphate attachment site M28_RS05355 IPR000811 Glycosyl transferase, family 35 M28_RS05360 IPR017853 Glycoside hydrolase superfamily M28_RS05360 IPR003385 Glycoside hydrolase, family 77 M28_RS05365 IPR000843 LacI-type HTH domain M28_RS05365 IPR028082 Periplasmic binding protein-like I M28_RS05365 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS05365 IPR001761 Periplasmic binding protein/LacI sugar binding domain M28_RS05370 IPR006059 Bacterial extracellular solute-binding protein M28_RS05370 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein M28_RS05370 IPR006061 Solute-binding family 1, conserved site M28_RS05375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS05375 IPR035906 MetI-like superfamily M28_RS05380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS05380 IPR035906 MetI-like superfamily M28_RS05385 IPR000843 LacI-type HTH domain M28_RS05385 IPR028082 Periplasmic binding protein-like I M28_RS05385 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS05390 IPR016546 Maltodextrose utilization protein MalA M28_RS05395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS05395 IPR035906 MetI-like superfamily M28_RS05400 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like M28_RS05400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS05400 IPR035906 MetI-like superfamily M28_RS05405 IPR002909 IPT domain M28_RS05405 IPR017853 Glycoside hydrolase superfamily M28_RS05405 IPR013780 Glycosyl hydrolase, all-beta M28_RS05405 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M28_RS05405 IPR002044 Carbohydrate binding module family 20 M28_RS05405 IPR013784 Carbohydrate-binding-like fold M28_RS05405 IPR031319 Alpha-amylase, C-terminal domain M28_RS05405 IPR013783 Immunoglobulin-like fold M28_RS05405 IPR014756 Immunoglobulin E-set M28_RS05405 IPR006046 Alpha amylase M28_RS05410 IPR013780 Glycosyl hydrolase, all-beta M28_RS05410 IPR017853 Glycoside hydrolase superfamily M28_RS05410 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M28_RS05410 IPR013783 Immunoglobulin-like fold M28_RS05410 IPR014756 Immunoglobulin E-set M28_RS05410 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain M28_RS05415 IPR006061 Solute-binding family 1, conserved site M28_RS05415 IPR006059 Bacterial extracellular solute-binding protein M28_RS05415 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein M28_RS05425 IPR013094 Alpha/beta hydrolase fold-3 M28_RS05425 IPR000084 PE-PGRS family, N-terminal M28_RS05425 IPR029058 Alpha/Beta hydrolase fold M28_RS05430 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes M28_RS05430 IPR006998 DltD M28_RS05435 IPR036736 ACP-like superfamily M28_RS05435 IPR003230 D-alanyl carrier protein M28_RS05435 IPR009081 Phosphopantetheine binding ACP domain M28_RS05440 IPR004299 Membrane bound O-acyl transferase, MBOAT M28_RS05440 IPR024024 D-alanyl transfer protein DltB M28_RS05440 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB M28_RS05445 IPR025110 AMP-binding enzyme, C-terminal domain M28_RS05445 IPR020845 AMP-binding, conserved site M28_RS05445 IPR000873 AMP-dependent synthetase/ligase M28_RS05445 IPR042099 AMP-dependent synthetase-like superfamily M28_RS05445 IPR010072 D-alanine--D-alanyl carrier protein ligase M28_RS05445 IPR010071 Amino acid adenylation domain M28_RS05455 IPR041471 UvrB, interaction domain M28_RS05455 IPR004807 UvrABC system, subunit B M28_RS05455 IPR036876 UVR domain superfamily M28_RS05455 IPR001943 UVR domain M28_RS05455 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05455 IPR001650 Helicase, C-terminal M28_RS05455 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS05455 IPR006935 Helicase/UvrB, N-terminal M28_RS05455 IPR024759 UvrB, YAD/RRR-motif-containing domain M28_RS05460 IPR001320 Ionotropic glutamate receptor M28_RS05460 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M28_RS05460 IPR018313 Solute-binding protein family 3, conserved site M28_RS05465 IPR003593 AAA+ ATPase domain M28_RS05465 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M28_RS05465 IPR003439 ABC transporter-like M28_RS05465 IPR017871 ABC transporter, conserved site M28_RS05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05470 IPR004501 Phosphotransferase system, EIIC component, type 3 M28_RS05470 IPR003352 Phosphotransferase system, EIIC M28_RS05480 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily M28_RS05480 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit M28_RS05485 IPR036095 PTS system IIB component-like superfamily M28_RS05485 IPR013012 Phosphotransferase system, EIIB component, type 3 M28_RS05485 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS05490 IPR011608 PRD domain M28_RS05490 IPR013011 Phosphotransferase system, EIIB component, type 2 M28_RS05490 IPR036095 PTS system IIB component-like superfamily M28_RS05490 IPR002178 PTS EIIA type-2 domain M28_RS05490 IPR016152 Phosphotransferase/anion transporter M28_RS05490 IPR036634 PRD domain superfamily M28_RS05490 IPR007737 Mga helix-turn-helix domain M28_RS05490 IPR013196 Helix-turn-helix, type 11 M28_RS05490 IPR036390 Winged helix DNA-binding domain superfamily M28_RS05490 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS05500 IPR001360 Glycoside hydrolase family 1 M28_RS05500 IPR018120 Glycoside hydrolase family 1, active site M28_RS05500 IPR017853 Glycoside hydrolase superfamily M28_RS05515 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05515 IPR015349 GTP-binding protein OBG, C-terminal M28_RS05515 IPR031167 OBG-type guanine nucleotide-binding (G) domain M28_RS05515 IPR006073 GTP binding domain M28_RS05515 IPR036726 GTP1/OBG domain superfamily M28_RS05515 IPR006169 GTP1/OBG domain M28_RS05515 IPR006074 GTP1/OBG, conserved site M28_RS05515 IPR014100 GTP-binding protein Obg/CgtA M28_RS05515 IPR005225 Small GTP-binding protein domain M28_RS05515 IPR035101 GTP-binding protein, Obg-type M28_RS05515 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily M28_RS05530 IPR036986 RNA-binding S4 domain superfamily M28_RS05530 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M28_RS05530 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M28_RS05530 IPR006145 Pseudouridine synthase, RsuA/RluA M28_RS05530 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS05530 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M28_RS05530 IPR002942 RNA-binding S4 domain M28_RS05540 IPR011701 Major facilitator superfamily M28_RS05540 IPR020846 Major facilitator superfamily domain M28_RS05540 IPR036259 MFS transporter superfamily M28_RS05540 IPR005829 Sugar transporter, conserved site M28_RS05545 IPR014999 Uncharacterised protein family UPF0371 M28_RS05565 IPR009057 Homeobox-like domain superfamily M28_RS05565 IPR006118 Recombinase, conserved site M28_RS05565 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily M28_RS05565 IPR006120 Resolvase, HTH domain M28_RS05565 IPR006119 Resolvase, N-terminal catalytic domain M28_RS05585 IPR014136 Ti-type conjugative transfer relaxase TraA M28_RS05585 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05585 IPR005053 MobA/MobL protein M28_RS05585 IPR041533 Bartonella effector protein, BID domain M28_RS05585 IPR027351 (+) RNA virus helicase core domain M28_RS05630 IPR010280 (Uracil-5)-methyltransferase family M28_RS05630 IPR002792 TRAM domain M28_RS05630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS05630 IPR030390 RNA methyltransferase TrmA, active site M28_RS05630 IPR030391 RNA methyltransferase TrmA, conserved site M28_RS05630 IPR012340 Nucleic acid-binding, OB-fold M28_RS05635 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU M28_RS05635 IPR004474 Cell envelope-related transcriptional attenuator domain M28_RS05640 IPR000623 Shikimate kinase/Threonine synthase-like 1 M28_RS05640 IPR031322 Shikimate kinase/gluconokinase M28_RS05640 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05645 IPR036968 Enolpyruvate transferase domain superfamily M28_RS05645 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase M28_RS05645 IPR001986 Enolpyruvate transferase domain M28_RS05645 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site M28_RS05645 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M28_RS05655 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 M28_RS05655 IPR001714 Peptidase M24, methionine aminopeptidase M28_RS05655 IPR000994 Peptidase M24 M28_RS05655 IPR036005 Creatinase/aminopeptidase-like M28_RS05660 IPR006683 Thioesterase domain M28_RS05660 IPR000644 CBS domain M28_RS05660 IPR010766 DRTGG M28_RS05660 IPR029069 HotDog domain superfamily M28_RS05660 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M28_RS05660 IPR036390 Winged helix DNA-binding domain superfamily M28_RS05660 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS05660 IPR000524 Transcription regulator HTH, GntR M28_RS05665 IPR000182 GNAT domain M28_RS05665 IPR016181 Acyl-CoA N-acyltransferase M28_RS05670 IPR019931 LPXTG cell wall anchor domain M28_RS05670 IPR035152 GA-like domain M28_RS05670 IPR009063 Immunoglobulin/albumin-binding domain superfamily M28_RS05670 IPR005877 YSIRK Gram-positive signal peptide M28_RS05670 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS05670 IPR035152 GA-like domain M28_RS05670 IPR019950 M protein-type anchor domain M28_RS05670 IPR009063 Immunoglobulin/albumin-binding domain superfamily M28_RS05670 IPR000724 IgG-binding B M28_RS05670 IPR000724 IgG-binding B M28_RS05670 IPR019950 M protein-type anchor domain M28_RS05670 IPR005877 YSIRK Gram-positive signal peptide M28_RS05670 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS05670 IPR019931 LPXTG cell wall anchor domain M28_RS05675 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase M28_RS05675 IPR001986 Enolpyruvate transferase domain M28_RS05675 IPR036968 Enolpyruvate transferase domain superfamily M28_RS05675 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M28_RS05680 IPR022636 S-adenosylmethionine synthetase superfamily M28_RS05680 IPR002133 S-adenosylmethionine synthetase M28_RS05680 IPR022629 S-adenosylmethionine synthetase, central domain M28_RS05680 IPR022631 S-adenosylmethionine synthetase, conserved site M28_RS05680 IPR022630 S-adenosylmethionine synthetase, C-terminal M28_RS05680 IPR022628 S-adenosylmethionine synthetase, N-terminal M28_RS05690 IPR013196 Helix-turn-helix, type 11 M28_RS05690 IPR004408 Biotin--acetyl-CoA-carboxylase ligase M28_RS05690 IPR004409 Biotin operon repressor, helix-turn-helix domain M28_RS05690 IPR036390 Winged helix DNA-binding domain superfamily M28_RS05690 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS05690 IPR008988 Transcriptional repressor, C-terminal M28_RS05690 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M28_RS05690 IPR030855 Bifunctional ligase/repressor BirA M28_RS05690 IPR003142 Biotin protein ligase, C-terminal M28_RS05700 IPR002559 Transposase, IS4-like M28_RS05700 IPR032806 H repeat-associated protein, N-terminal M28_RS05705 IPR012763 DNA polymerase III, subunit gamma/ tau M28_RS05705 IPR003593 AAA+ ATPase domain M28_RS05705 IPR022754 DNA polymerase III, gamma subunit, domain III M28_RS05705 IPR001270 ClpA/B family M28_RS05705 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05705 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M28_RS05710 IPR003018 GAF domain M28_RS05710 IPR029016 GAF-like domain superfamily M28_RS05710 IPR000614 Free Met sulfoxide reductase conserved site M28_RS05725 IPR000764 Uridine kinase-like M28_RS05725 IPR026008 Uridine kinase M28_RS05725 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05725 IPR006083 Phosphoribulokinase/uridine kinase M28_RS05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05730 IPR001650 Helicase, C-terminal M28_RS05730 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS05730 IPR011545 DEAD/DEAH box helicase domain M28_RS05735 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M28_RS05735 IPR040802 Peptidoglycan GlcNAc deacetylase, N-terminal M28_RS05735 IPR017219 Peptidoglycan GlcNAc deacetylase M28_RS05735 IPR002509 NodB homology domain M28_RS05740 IPR015590 Aldehyde dehydrogenase domain M28_RS05740 IPR016161 Aldehyde/histidinol dehydrogenase M28_RS05740 IPR016163 Aldehyde dehydrogenase, C-terminal M28_RS05740 IPR016160 Aldehyde dehydrogenase, cysteine active site M28_RS05740 IPR016162 Aldehyde dehydrogenase, N-terminal M28_RS05745 IPR018274 PEP-utilising enzyme, active site M28_RS05745 IPR040442 Pyruvate kinase-like domain superfamily M28_RS05745 IPR008731 Phosphotransferase system, enzyme I N-terminal M28_RS05745 IPR036618 PtsI, HPr-binding domain superfamily M28_RS05745 IPR008279 PEP-utilising enzyme, mobile domain M28_RS05745 IPR006318 Phosphotransferase system, enzyme I-like M28_RS05745 IPR024692 Phosphotransferase system, enzyme I M28_RS05745 IPR000121 PEP-utilising enzyme, C-terminal M28_RS05745 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M28_RS05745 IPR023151 PEP-utilising enzyme, conserved site M28_RS05745 IPR036637 Phosphohistidine domain superfamily M28_RS05750 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M28_RS05750 IPR035895 HPr-like superfamily M28_RS05750 IPR000032 Phosphocarrier protein HPr-like M28_RS05750 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M28_RS05755 IPR002109 Glutaredoxin M28_RS05755 IPR011909 Glutaredoxin-like protein NrdH M28_RS05755 IPR036249 Thioredoxin-like superfamily M28_RS05760 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal M28_RS05760 IPR013509 Ribonucleotide reductase large subunit, N-terminal M28_RS05760 IPR000788 Ribonucleotide reductase large subunit, C-terminal M28_RS05760 IPR039718 Ribonucleoside-diphosphate reductase large subunit M28_RS05760 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE M28_RS05760 IPR013346 Ribonucleotide reductase, class I , alpha subunit M28_RS05760 IPR013554 Ribonucleotide reductase N-terminal M28_RS05765 IPR026494 Ribonucleoside reductase subunit beta, NrdF M28_RS05765 IPR012348 Ribonucleotide reductase-like M28_RS05765 IPR009078 Ferritin-like superfamily M28_RS05765 IPR033909 Ribonucleotide reductase small subunit M28_RS05765 IPR000358 Ribonucleotide reductase small subunit family M28_RS05765 IPR030475 Ribonucleotide reductase small subunit, acitve site M28_RS05790 IPR001387 Cro/C1-type helix-turn-helix domain M28_RS05790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS05795 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria M28_RS05795 IPR002318 Alanine-tRNA ligase, class IIc M28_RS05795 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS05795 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M28_RS05795 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M28_RS05795 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain M28_RS05795 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily M28_RS05795 IPR003156 DHHA1 domain M28_RS05795 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal M28_RS05800 IPR023059 Foldase protein PrsA M28_RS05800 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M28_RS05800 IPR027304 Trigger factor/SurA domain superfamily M28_RS05805 IPR002935 Class I-like SAM-dependent O-methyltransferase M28_RS05805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS05810 IPR036259 MFS transporter superfamily M28_RS05810 IPR020846 Major facilitator superfamily domain M28_RS05810 IPR011701 Major facilitator superfamily M28_RS05815 IPR001567 Peptidase M3A/M3B catalytic domain M28_RS05815 IPR004438 Peptidase M3B, oligoendopeptidase F M28_RS05815 IPR013647 Oligopeptidase F, N-terminal domain M28_RS05815 IPR042088 Oligoendopeptidase F, C-terminal domain M28_RS05825 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M28_RS05825 IPR006145 Pseudouridine synthase, RsuA/RluA M28_RS05825 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS05825 IPR002942 RNA-binding S4 domain M28_RS05825 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M28_RS05825 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M28_RS05825 IPR036986 RNA-binding S4 domain superfamily M28_RS05830 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase M28_RS05830 IPR037171 NagB/RpiA transferase-like M28_RS05830 IPR018321 Glucosamine-6-phosphate isomerase, conserved site M28_RS05830 IPR004547 Glucosamine-6-phosphate isomerase M28_RS05835 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA M28_RS05835 IPR042118 QueA, domain 1 M28_RS05835 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily M28_RS05835 IPR042119 QueA, domain 2 M28_RS05860 IPR019832 Manganese/iron superoxide dismutase, C-terminal M28_RS05860 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily M28_RS05860 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily M28_RS05860 IPR019833 Manganese/iron superoxide dismutase, binding site M28_RS05860 IPR019831 Manganese/iron superoxide dismutase, N-terminal M28_RS05860 IPR001189 Manganese/iron superoxide dismutase M28_RS05875 IPR019554 Soluble ligand binding domain M28_RS05875 IPR004787 Competence protein ComEA M28_RS05875 IPR010994 RuvA domain 2-like M28_RS05875 IPR004509 Competence protein ComEA, helix-hairpin-helix domain M28_RS05875 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M28_RS05880 IPR002123 Phospholipid/glycerol acyltransferase M28_RS05885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS05885 IPR007848 Methyltransferase small domain M28_RS05890 IPR035901 GIY-YIG endonuclease superfamily M28_RS05890 IPR000305 GIY-YIG endonuclease M28_RS05895 IPR023051 Potassium uptake protein, low affinity, Kup M28_RS05895 IPR003855 Potassium transporter M28_RS05900 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M28_RS05900 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05900 IPR014014 RNA helicase, DEAD-box type, Q motif M28_RS05900 IPR001650 Helicase, C-terminal M28_RS05900 IPR030880 DEAD-box ATP-dependent RNA helicase CshA M28_RS05900 IPR011545 DEAD/DEAH box helicase domain M28_RS05900 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS05905 IPR041732 Peptide chain release factor 3, GTP-binding domain M28_RS05905 IPR005225 Small GTP-binding protein domain M28_RS05905 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS05905 IPR000795 Transcription factor, GTP-binding domain M28_RS05905 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily M28_RS05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05905 IPR031157 Tr-type G domain, conserved site M28_RS05905 IPR035647 EF-G domain III/V-like M28_RS05905 IPR004161 Translation elongation factor EFTu-like, domain 2 M28_RS05905 IPR004548 Peptide chain release factor 3 M28_RS05905 IPR032090 Peptide chain release factor 3, C-terminal M28_RS05920 IPR004101 Mur ligase, C-terminal M28_RS05920 IPR036565 Mur-like, catalytic domain superfamily M28_RS05920 IPR013221 Mur ligase, central M28_RS05920 IPR000713 Mur ligase, N-terminal catalytic domain M28_RS05920 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase M28_RS05920 IPR035911 MurE/MurF, N-terminal M28_RS05920 IPR036615 Mur ligase, C-terminal domain superfamily M28_RS05925 IPR011761 ATP-grasp fold M28_RS05925 IPR013815 ATP-grasp fold, subdomain 1 M28_RS05925 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site M28_RS05925 IPR005905 D-alanine--D-alanine ligase M28_RS05925 IPR011127 D-alanine--D-alanine ligase, N-terminal domain M28_RS05925 IPR011095 D-alanine--D-alanine ligase, C-terminal M28_RS05925 IPR016185 Pre-ATP-grasp domain superfamily M28_RS05930 IPR023627 Recombination protein RecR M28_RS05930 IPR034137 RecR, TOPRIM domain M28_RS05930 IPR006171 TOPRIM domain M28_RS05930 IPR015967 Recombination protein RecR, conserved site M28_RS05930 IPR000093 DNA recombination protein RecR M28_RS05930 IPR023628 Recombination protein RecR, C4-type zinc finger M28_RS05935 IPR012338 Beta-lactamase/transpeptidase-like M28_RS05935 IPR005311 Penicillin-binding protein, dimerisation domain M28_RS05935 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M28_RS05935 IPR001460 Penicillin-binding protein, transpeptidase M28_RS05940 IPR023271 Aquaporin-like M28_RS05940 IPR024002 Formate/nitrite transporter, conserved site M28_RS05940 IPR000292 Formate/nitrite transporter M28_RS05950 IPR004173 3H domain M28_RS05950 IPR035922 3H domain superfamily M28_RS05950 IPR013196 Helix-turn-helix, type 11 M28_RS05950 IPR026043 Transcription repressor NadR M28_RS05950 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS05950 IPR036390 Winged helix DNA-binding domain superfamily M28_RS05955 IPR013078 Histidine phosphatase superfamily, clade-1 M28_RS05955 IPR029033 Histidine phosphatase superfamily M28_RS05955 IPR005952 Phosphoglycerate mutase 1 M28_RS05960 IPR013785 Aldolase-type TIM barrel M28_RS05960 IPR033886 Dihydroorotate dehydrogenase, class 1A M28_RS05960 IPR005720 Dihydroorotate dehydrogenase domain M28_RS05960 IPR024920 Dihydroorotate dehydrogenase, class 1 M28_RS05960 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 M28_RS05960 IPR001295 Dihydroorotate dehydrogenase, conserved site M28_RS05965 IPR008250 P-type ATPase, A domain superfamily M28_RS05965 IPR027256 P-type ATPase, subfamily IB M28_RS05965 IPR036412 HAD-like superfamily M28_RS05965 IPR001757 P-type ATPase M28_RS05965 IPR018303 P-type ATPase, phosphorylation site M28_RS05965 IPR023298 P-type ATPase, transmembrane domain superfamily M28_RS05965 IPR023299 P-type ATPase, cytoplasmic domain N M28_RS05965 IPR023214 HAD superfamily M28_RS05970 IPR000119 Histone-like DNA-binding protein M28_RS05970 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M28_RS05970 IPR020816 Histone-like DNA-binding protein, conserved site M28_RS05980 IPR013830 SGNH hydrolase-type esterase domain M28_RS05980 IPR036514 SGNH hydrolase superfamily M28_RS05985 IPR003797 DegV M28_RS05995 IPR038729 Rad50/SbcC-type AAA domain M28_RS05995 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS05995 IPR004604 DNA recombination/repair protein RecN M28_RS06000 IPR036390 Winged helix DNA-binding domain superfamily M28_RS06000 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS06000 IPR020900 Arginine repressor, DNA-binding domain M28_RS06000 IPR036251 Arginine repressor, C-terminal domain superfamily M28_RS06000 IPR020899 Arginine repressor, C-terminal M28_RS06000 IPR001669 Arginine repressor M28_RS06005 IPR004538 Haemolysin A /rRNA methyltransferase TlyA M28_RS06005 IPR002877 Ribosomal RNA methyltransferase FtsJ domain M28_RS06005 IPR002942 RNA-binding S4 domain M28_RS06005 IPR036986 RNA-binding S4 domain superfamily M28_RS06005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS06010 IPR008949 Isoprenoid synthase domain superfamily M28_RS06010 IPR000092 Polyprenyl synthetase M28_RS06010 IPR033749 Polyprenyl synthetase, conserved site M28_RS06015 IPR003761 Exonuclease VII, small subunit M28_RS06015 IPR037004 Exonuclease VII, small subunit superfamily M28_RS06020 IPR025824 OB-fold nucleic acid binding domain M28_RS06020 IPR020579 Exonuclease VII, large subunit, C-terminal M28_RS06020 IPR003753 Exonuclease VII, large subunit M28_RS06025 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M28_RS06025 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase M28_RS06025 IPR036291 NAD(P)-binding domain superfamily M28_RS06025 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site M28_RS06025 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M28_RS06030 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M28_RS06030 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M28_RS06030 IPR005843 Alpha-D-phosphohexomutase, C-terminal M28_RS06030 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M28_RS06030 IPR005841 Alpha-D-phosphohexomutase superfamily M28_RS06030 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M28_RS06030 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M28_RS06030 IPR016066 Alpha-D-phosphohexomutase, conserved site M28_RS06035 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain M28_RS06035 IPR002081 Cryptochrome/DNA photolyase class 1 M28_RS06035 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M28_RS06035 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily M28_RS06035 IPR006050 DNA photolyase, N-terminal M28_RS06035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS06035 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily M28_RS06040 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS06040 IPR003593 AAA+ ATPase domain M28_RS06040 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M28_RS06040 IPR003439 ABC transporter-like M28_RS06040 IPR017871 ABC transporter, conserved site M28_RS06045 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M28_RS06045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS06045 IPR035906 MetI-like superfamily M28_RS06050 IPR038073 YkuJ-like superfamily M28_RS06050 IPR014904 Protein of unknown function DUF1797 M28_RS06055 IPR001270 ClpA/B family M28_RS06055 IPR028299 ClpA/B, conserved site 2 M28_RS06055 IPR019489 Clp ATPase, C-terminal M28_RS06055 IPR003593 AAA+ ATPase domain M28_RS06055 IPR018368 ClpA/B, conserved site 1 M28_RS06055 IPR041546 ClpA/ClpB, AAA lid domain M28_RS06055 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS06055 IPR001943 UVR domain M28_RS06055 IPR003959 ATPase, AAA-type, core M28_RS06060 IPR015797 NUDIX hydrolase-like domain superfamily M28_RS06060 IPR020084 NUDIX hydrolase, conserved site M28_RS06060 IPR000086 NUDIX hydrolase domain M28_RS06060 IPR022927 RNA pyrophosphohydrolase RppH M28_RS06070 IPR023585 Isoleucine-tRNA ligase, type 1 M28_RS06070 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M28_RS06070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS06070 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M28_RS06070 IPR002301 Isoleucine-tRNA ligase M28_RS06070 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain M28_RS06070 IPR002300 Aminoacyl-tRNA synthetase, class Ia M28_RS06070 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M28_RS06070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M28_RS06075 IPR007793 DivIVA family M28_RS06075 IPR019933 DivIVA domain M28_RS06080 IPR040591 YlmH, putative RNA-binding domain M28_RS06080 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M28_RS06080 IPR036986 RNA-binding S4 domain superfamily M28_RS06080 IPR002942 RNA-binding S4 domain M28_RS06090 IPR038594 SepF-like superfamily M28_RS06090 IPR007561 Cell division protein SepF/SepF-related M28_RS06090 IPR023052 Cell division protein SepF M28_RS06095 IPR001608 Alanine racemase, N-terminal M28_RS06095 IPR011078 Pyridoxal phosphate homeostasis protein M28_RS06095 IPR029066 PLP-binding barrel M28_RS06100 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily M28_RS06100 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain M28_RS06100 IPR003008 Tubulin/FtsZ, GTPase domain M28_RS06100 IPR008280 Tubulin/FtsZ, C-terminal M28_RS06100 IPR024757 Cell division protein FtsZ, C-terminal M28_RS06100 IPR020805 Cell division protein FtsZ, conserved site M28_RS06100 IPR036525 Tubulin/FtsZ, GTPase domain superfamily M28_RS06100 IPR000158 Cell division protein FtsZ M28_RS06105 IPR003494 SHS2 domain inserted in FtsA M28_RS06105 IPR021873 Cell division protein FtsA, C-terminal M28_RS06105 IPR020823 Cell division protein FtsA M28_RS06110 IPR013685 POTRA domain, FtsQ-type M28_RS06110 IPR034746 POTRA domain M28_RS06110 IPR026580 Cell division protein DivIB M28_RS06115 IPR004276 Glycosyltransferase family 28, N-terminal domain M28_RS06115 IPR007235 Glycosyl transferase, family 28, C-terminal M28_RS06115 IPR006009 N-acetylglucosaminyltransferase, MurG M28_RS06120 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase M28_RS06120 IPR036615 Mur ligase, C-terminal domain superfamily M28_RS06120 IPR004101 Mur ligase, C-terminal M28_RS06120 IPR036565 Mur-like, catalytic domain superfamily M28_RS06120 IPR013221 Mur ligase, central M28_RS06130 IPR004161 Translation elongation factor EFTu-like, domain 2 M28_RS06130 IPR000640 Elongation factor EFG, domain V-like M28_RS06130 IPR031157 Tr-type G domain, conserved site M28_RS06130 IPR006298 GTP-binding protein TypA M28_RS06130 IPR042116 GTP-binding protein TypA/BipA, C-terminal M28_RS06130 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS06130 IPR000795 Transcription factor, GTP-binding domain M28_RS06130 IPR035647 EF-G domain III/V-like M28_RS06130 IPR041095 Elongation Factor G, domain II M28_RS06130 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS06130 IPR005225 Small GTP-binding protein domain M28_RS06130 IPR035651 BipA, domain V M28_RS06135 IPR001763 Rhodanese-like domain M28_RS06135 IPR036873 Rhodanese-like domain superfamily M28_RS06140 IPR000600 ROK family M28_RS06140 IPR004654 Glucokinase ROK M28_RS06150 IPR008331 Ferritin/DPS protein domain M28_RS06150 IPR012347 Ferritin-like M28_RS06150 IPR023188 DNA-binding protein Dps, conserved site M28_RS06150 IPR002177 DNA-binding protein Dps M28_RS06150 IPR009078 Ferritin-like superfamily M28_RS06160 IPR007197 Radical SAM M28_RS06160 IPR027492 Dual-specificity RNA methyltransferase RlmN M28_RS06160 IPR040072 Methyltransferase (Class A) M28_RS06160 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr M28_RS06160 IPR013785 Aldolase-type TIM barrel M28_RS06165 IPR009370 Protein of unknown function DUF1027 M28_RS06165 IPR038141 YutD-like superfamily M28_RS06170 IPR000843 LacI-type HTH domain M28_RS06170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS06170 IPR028082 Periplasmic binding protein-like I M28_RS06175 IPR008269 Peptidase S16, Lon proteolytic domain M28_RS06175 IPR036034 PDZ superfamily M28_RS06175 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS06175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS06175 IPR001478 PDZ domain M28_RS06175 IPR039381 Endopeptidase La, PDZ domain M28_RS06175 IPR027065 Lon protease M28_RS06180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS06180 IPR001980 Phosphopantetheine adenylyltransferase M28_RS06180 IPR004821 Cytidyltransferase-like domain M28_RS06185 IPR004398 RNA methyltransferase, RsmD M28_RS06185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS06190 IPR004618 Aspartate--ammonia ligase M28_RS06190 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS06195 IPR003964 Carbamate kinase M28_RS06195 IPR001048 Aspartate/glutamate/uridylate kinase M28_RS06195 IPR036393 Acetylglutamate kinase-like superfamily M28_RS06200 IPR010964 Peptidase M20A, peptidase V-related M28_RS06200 IPR002933 Peptidase M20 M28_RS06200 IPR036264 Bacterial exopeptidase dimerisation domain M28_RS06205 IPR018385 C4-dicarboxylate anaerobic carrier-like M28_RS06210 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M28_RS06210 IPR006130 Aspartate/ornithine carbamoyltransferase M28_RS06210 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M28_RS06210 IPR002292 Ornithine/putrescine carbamoyltransferase M28_RS06210 IPR024904 Ornithine carbamoyltransferase M28_RS06210 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M28_RS06215 IPR039143 Glucosamine 6-phosphate N-acetyltransferase M28_RS06215 IPR016181 Acyl-CoA N-acyltransferase M28_RS06215 IPR000182 GNAT domain M28_RS06220 IPR003876 Arginine deiminase M28_RS06230 IPR036251 Arginine repressor, C-terminal domain superfamily M28_RS06230 IPR020899 Arginine repressor, C-terminal M28_RS06230 IPR020900 Arginine repressor, DNA-binding domain M28_RS06230 IPR001669 Arginine repressor M28_RS06230 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS06230 IPR036390 Winged helix DNA-binding domain superfamily M28_RS06245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS06245 IPR005467 Histidine kinase domain M28_RS06245 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS06245 IPR033479 Double Cache domain 1 M28_RS06245 IPR003660 HAMP domain M28_RS06245 IPR010559 Signal transduction histidine kinase, internal region M28_RS06245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS06250 IPR009057 Homeobox-like domain superfamily M28_RS06250 IPR011006 CheY-like superfamily M28_RS06250 IPR018060 DNA binding HTH domain, AraC-type M28_RS06250 IPR001789 Signal transduction response regulator, receiver domain M28_RS06270 IPR006177 Staphylococcal/streptococcal toxin, bacterial M28_RS06270 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain M28_RS06270 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial M28_RS06270 IPR016091 Superantigen toxin, C-terminal M28_RS06270 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site M28_RS06270 IPR008992 Enterotoxin M28_RS06285 IPR007921 CHAP domain M28_RS06285 IPR038765 Papain-like cysteine peptidase superfamily M28_RS06285 IPR003646 SH3-like domain, bacterial-type M28_RS06285 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain M28_RS06430 IPR003115 ParB/Sulfiredoxin M28_RS06430 IPR036086 ParB/Sulfiredoxin superfamily M28_RS06490 IPR036614 Holliday junction resolvase RusA-like superfamily M28_RS06490 IPR008822 Holliday junction resolvase RusA-like M28_RS06490 IPR016281 Crossover junction endodeoxyribonuclease, RusA M28_RS06500 IPR012340 Nucleic acid-binding, OB-fold M28_RS06500 IPR000424 Primosome PriB/single-strand DNA-binding M28_RS06500 IPR011344 Single-stranded DNA-binding protein M28_RS06530 IPR034829 DnaD-like domain superfamily M28_RS06530 IPR006343 DnaD domain M28_RS06530 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS06565 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal M28_RS06565 IPR013557 AntA/AntB antirepressor M28_RS06575 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS06575 IPR001387 Cro/C1-type helix-turn-helix domain M28_RS06595 IPR002579 Peptide methionine sulphoxide reductase MrsB M28_RS06595 IPR011057 Mss4-like superfamily M28_RS06595 IPR028427 Peptide methionine sulfoxide reductase M28_RS06595 IPR002569 Peptide methionine sulphoxide reductase MsrA M28_RS06595 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily M28_RS06600 IPR013740 Redoxin M28_RS06600 IPR036249 Thioredoxin-like superfamily M28_RS06605 IPR003834 Cytochrome C biogenesis protein, transmembrane domain M28_RS06610 IPR021127 CRISPR-associated endonuclease Cas2 M28_RS06610 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 M28_RS06615 IPR002729 CRISPR-associated protein Cas1 M28_RS06615 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain M28_RS06615 IPR019856 CRISPR-associated protein Cas1, DVULG subtype M28_RS06615 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain M28_RS06645 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M28_RS06645 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm M28_RS06645 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M28_RS06645 IPR002303 Valine-tRNA ligase M28_RS06645 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M28_RS06645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS06645 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M28_RS06645 IPR033705 Valyl tRNA synthetase, anticodon-binding domain M28_RS06645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M28_RS06645 IPR002300 Aminoacyl-tRNA synthetase, class Ia M28_RS06645 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M28_RS06675 IPR032806 H repeat-associated protein, N-terminal M28_RS06675 IPR002559 Transposase, IS4-like M28_RS06730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS06730 IPR016628 ATPase, SAG2001, predicted M28_RS06780 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS06780 IPR002543 FtsK domain M28_RS06795 IPR026345 Adhesin isopeptide-forming adherence domain M28_RS06795 IPR041324 Antigen I/II N-terminal M28_RS06795 IPR032300 Cell surface antigen, C-terminal M28_RS06795 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain M28_RS06795 IPR019931 LPXTG cell wall anchor domain M28_RS06795 IPR036234 Glucan-binding protein C/Surface antigen I/II, V-domain superfamily M28_RS06795 IPR009578 Cell surface antigen repeat M28_RS06820 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS06820 IPR001387 Cro/C1-type helix-turn-helix domain M28_RS06850 IPR019950 M protein-type anchor domain M28_RS06850 IPR019931 LPXTG cell wall anchor domain M28_RS06850 IPR005877 YSIRK Gram-positive signal peptide M28_RS06850 IPR014933 Alpha C protein, N-terminal M28_RS06850 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS06850 IPR038335 ACP, C-terminal domain superfamily M28_RS06850 IPR038544 ACP, N-terminal domain superfamily M28_RS06850 IPR012706 Rib/alpha/Esp surface antigen M28_RS06850 IPR035327 AlphaC, C-terminal M28_RS06855 IPR029062 Class I glutamine amidotransferase-like M28_RS06855 IPR018062 HTH domain AraC-type, conserved site M28_RS06855 IPR020449 Transcription regulator HTH, AraC- type M28_RS06855 IPR018060 DNA binding HTH domain, AraC-type M28_RS06855 IPR009057 Homeobox-like domain superfamily M28_RS06860 IPR013785 Aldolase-type TIM barrel M28_RS06860 IPR002701 Chorismate mutase II, prokaryotic-type M28_RS06860 IPR010954 Chorismate mutase, Firmicutes/Deinococcus M28_RS06860 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 M28_RS06860 IPR006218 DAHP synthetase I/KDSA M28_RS06860 IPR036979 Chorismate mutase domain superfamily M28_RS06865 IPR030963 3-dehydroquinate synthase family M28_RS06865 IPR030960 3-dehydroquinate synthase domain M28_RS06865 IPR016037 3-dehydroquinate synthase AroB M28_RS06880 IPR041698 Methyltransferase domain 25 M28_RS06880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS06885 IPR022893 Shikimate dehydrogenase family M28_RS06885 IPR036291 NAD(P)-binding domain superfamily M28_RS06885 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal M28_RS06885 IPR011342 Shikimate dehydrogenase M28_RS06885 IPR041121 SDH, C-terminal M28_RS06890 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M28_RS06890 IPR032311 Domain of unknown function DUF4982 M28_RS06890 IPR008979 Galactose-binding-like domain superfamily M28_RS06890 IPR008964 Invasin/intimin cell-adhesion fragments M28_RS06890 IPR013783 Immunoglobulin-like fold M28_RS06890 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich M28_RS06890 IPR023232 Glycoside hydrolase, family 2, active site M28_RS06890 IPR006103 Glycoside hydrolase family 2, catalytic domain M28_RS06890 IPR006101 Glycoside hydrolase, family 2 M28_RS06890 IPR040605 Glycoside hydrolase family 2, domain 5 M28_RS06890 IPR006104 Glycosyl hydrolases family 2, sugar binding domain M28_RS06890 IPR017853 Glycoside hydrolase superfamily M28_RS06895 IPR011006 CheY-like superfamily M28_RS06895 IPR009057 Homeobox-like domain superfamily M28_RS06895 IPR018060 DNA binding HTH domain, AraC-type M28_RS06895 IPR001789 Signal transduction response regulator, receiver domain M28_RS06900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS06900 IPR003660 HAMP domain M28_RS06900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS06900 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS06900 IPR010559 Signal transduction histidine kinase, internal region M28_RS06900 IPR033479 Double Cache domain 1 M28_RS06900 IPR005467 Histidine kinase domain M28_RS06910 IPR022627 Domain of unknown function DUF3502 M28_RS06915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS06915 IPR035906 MetI-like superfamily M28_RS06920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS06920 IPR035906 MetI-like superfamily M28_RS06925 IPR000600 ROK family M28_RS06935 IPR017853 Glycoside hydrolase superfamily M28_RS06935 IPR018120 Glycoside hydrolase family 1, active site M28_RS06935 IPR001360 Glycoside hydrolase family 1 M28_RS06940 IPR011496 Beta-N-acetylglucosaminidase M28_RS06940 IPR017853 Glycoside hydrolase superfamily M28_RS06940 IPR029018 Beta-hexosaminidase-like, domain 2 M28_RS06940 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M28_RS06940 IPR013780 Glycosyl hydrolase, all-beta M28_RS06945 IPR036390 Winged helix DNA-binding domain superfamily M28_RS06945 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS06945 IPR000524 Transcription regulator HTH, GntR M28_RS06945 IPR028082 Periplasmic binding protein-like I M28_RS06945 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain M28_RS06955 IPR011013 Galactose mutarotase-like domain superfamily M28_RS06955 IPR041147 Glycosyl hydrolases family 38, C-terminal beta sandwich domain M28_RS06955 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M28_RS06955 IPR011682 Glycosyl hydrolase family 38, C-terminal M28_RS06955 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily M28_RS06955 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily M28_RS06955 IPR000602 Glycoside hydrolase family 38, N-terminal domain M28_RS06955 IPR037094 Glycoside hydrolase family 38, central domain superfamily M28_RS06955 IPR041509 Glycosyl hydrolases 38, beta-1 domain M28_RS06955 IPR015341 Glycoside hydrolase family 38, central domain M28_RS06965 IPR002792 TRAM domain M28_RS06965 IPR030390 RNA methyltransferase TrmA, active site M28_RS06965 IPR010280 (Uracil-5)-methyltransferase family M28_RS06965 IPR030391 RNA methyltransferase TrmA, conserved site M28_RS06965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS06965 IPR012340 Nucleic acid-binding, OB-fold M28_RS06970 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS06970 IPR003783 Regulatory protein RecX M28_RS06975 IPR007295 Domain of unknown function DUF402 M28_RS06975 IPR035930 FomD-like superfamily M28_RS06975 IPR016882 Uncharacterised protein family UPF0374 M28_RS07055 IPR036567 Ribosome hibernation promotion factor-like M28_RS07055 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily M28_RS07055 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal M28_RS07055 IPR003489 Ribosome hibernation promoting factor/RaiA M28_RS07055 IPR034694 Ribosome hibernation promoting factor, long/plastid M28_RS07065 IPR006935 Helicase/UvrB, N-terminal M28_RS07065 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07065 IPR001650 Helicase, C-terminal M28_RS07065 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS07070 IPR035647 EF-G domain III/V-like M28_RS07070 IPR023582 Impact family M28_RS07070 IPR015796 Impact family, bacterial/archaeal M28_RS07070 IPR001498 Impact, N-terminal M28_RS07070 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site M28_RS07070 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS07070 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal M28_RS07070 IPR036956 Impact, N-terminal domain superfamily M28_RS07075 IPR005856 Cysteine synthase M28_RS07075 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M28_RS07075 IPR001926 Pyridoxal-phosphate dependent enzyme M28_RS07075 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site M28_RS07075 IPR005859 Cysteine synthase CysK M28_RS07080 IPR003029 S1 domain M28_RS07080 IPR022967 RNA-binding domain, S1 M28_RS07080 IPR012340 Nucleic acid-binding, OB-fold M28_RS07085 IPR023214 HAD superfamily M28_RS07085 IPR000150 Cof family M28_RS07085 IPR029000 Cyclophilin-like domain superfamily M28_RS07085 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M28_RS07085 IPR036412 HAD-like superfamily M28_RS07085 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS07090 IPR011006 CheY-like superfamily M28_RS07090 IPR001789 Signal transduction response regulator, receiver domain M28_RS07090 IPR000792 Transcription regulator LuxR, C-terminal M28_RS07090 IPR016032 Signal transduction response regulator, C-terminal effector M28_RS07095 IPR003660 HAMP domain M28_RS07095 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS07095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS07095 IPR005467 Histidine kinase domain M28_RS07095 IPR017202 Sensor histidine kinase LiaS/VraS M28_RS07095 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain M28_RS07105 IPR008271 Serine/threonine-protein kinase, active site M28_RS07105 IPR017441 Protein kinase, ATP binding site M28_RS07105 IPR005543 PASTA domain M28_RS07105 IPR011009 Protein kinase-like domain superfamily M28_RS07105 IPR000719 Protein kinase domain M28_RS07110 IPR001932 PPM-type phosphatase domain M28_RS07110 IPR015655 Protein phosphatase 2C family M28_RS07110 IPR036457 PPM-type phosphatase domain superfamily M28_RS07115 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M28_RS07115 IPR035926 NusB-like superfamily M28_RS07115 IPR006027 NusB/RsmB/TIM44 M28_RS07115 IPR023267 RNA (C5-cytosine) methyltransferase M28_RS07115 IPR004573 rRNA small subunit methyltransferase B M28_RS07115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS07115 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site M28_RS07120 IPR005793 Formyl transferase, C-terminal M28_RS07120 IPR005794 Methionyl-tRNA formyltransferase M28_RS07120 IPR002376 Formyl transferase, N-terminal M28_RS07120 IPR036477 Formyl transferase, N-terminal domain superfamily M28_RS07120 IPR037022 Formyl transferase, C-terminal domain superfamily M28_RS07120 IPR011034 Formyl transferase-like, C-terminal domain superfamily M28_RS07120 IPR001555 Phosphoribosylglycinamide formyltransferase, active site M28_RS07120 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain M28_RS07125 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain M28_RS07125 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily M28_RS07125 IPR041222 Primosomal protein N', 3' DNA-binding domain M28_RS07125 IPR005259 Primosomal protein N' M28_RS07125 IPR041236 Primosomal protein N, C-terminal domain M28_RS07125 IPR006935 Helicase/UvrB, N-terminal M28_RS07125 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS07125 IPR001650 Helicase, C-terminal M28_RS07125 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07130 IPR006110 RNA polymerase, subunit omega/K/RPB6 M28_RS07130 IPR003716 DNA-directed RNA polymerase, omega subunit M28_RS07130 IPR012293 RNA polymerase subunit, RPB6/omega M28_RS07130 IPR036161 RPB6/omega subunit-like superfamily M28_RS07135 IPR017665 Guanylate kinase M28_RS07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07135 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M28_RS07135 IPR008144 Guanylate kinase-like domain M28_RS07135 IPR020590 Guanylate kinase, conserved site M28_RS07140 IPR022711 Ribonuclease Y, N-terminal M28_RS07140 IPR006675 HDIG domain M28_RS07140 IPR004088 K Homology domain, type 1 M28_RS07140 IPR036612 K Homology domain, type 1 superfamily M28_RS07140 IPR004087 K Homology domain M28_RS07140 IPR006674 HD domain M28_RS07140 IPR003607 HD/PDEase domain M28_RS07140 IPR017705 Ribonuclease Y M28_RS07145 IPR036390 Winged helix DNA-binding domain superfamily M28_RS07145 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS07145 IPR005119 LysR, substrate-binding M28_RS07145 IPR000847 Transcription regulator HTH, LysR M28_RS07150 IPR002155 Thiolase M28_RS07150 IPR016039 Thiolase-like M28_RS07150 IPR020617 Thiolase, C-terminal M28_RS07150 IPR020613 Thiolase, conserved site M28_RS07150 IPR020616 Thiolase, N-terminal M28_RS07150 IPR020615 Thiolase, acyl-enzyme intermediate active site M28_RS07155 IPR037171 NagB/RpiA transferase-like M28_RS07155 IPR012792 3-oxoacid CoA-transferase, subunit A M28_RS07155 IPR004163 Coenzyme A transferase binding site M28_RS07155 IPR004165 Coenzyme A transferase family I M28_RS07160 IPR037171 NagB/RpiA transferase-like M28_RS07160 IPR012791 3-oxoacid CoA-transferase, subunit B M28_RS07160 IPR004164 Coenzyme A transferase active site M28_RS07160 IPR004165 Coenzyme A transferase family I M28_RS07165 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS07165 IPR020904 Short-chain dehydrogenase/reductase, conserved site M28_RS07165 IPR036291 NAD(P)-binding domain superfamily M28_RS07165 IPR011294 3-hydroxybutyrate dehydrogenase M28_RS07170 IPR003474 Gluconate transporter M28_RS07175 IPR003815 S-ribosylhomocysteinase (LuxS) M28_RS07175 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M28_RS07175 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily M28_RS07180 IPR040532 MapZ, extracellular C-terminal domain 2 M28_RS07180 IPR030858 Mid-cell-anchored protein Z M28_RS07180 IPR041295 MapZ, extracellular domain 1 M28_RS07185 IPR000241 Putative RNA methylase domain M28_RS07185 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M28_RS07185 IPR004114 THUMP domain M28_RS07185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS07195 IPR019933 DivIVA domain M28_RS07195 IPR007793 DivIVA family M28_RS07195 IPR011229 Cell cycle protein GpsB M28_RS07200 IPR010697 YspA SLOG family M28_RS07205 IPR004612 Holliday junction resolvase RecU M28_RS07205 IPR011335 Restriction endonuclease type II-like M28_RS07205 IPR011856 tRNA endonuclease-like domain superfamily M28_RS07210 IPR001264 Glycosyl transferase, family 51 M28_RS07210 IPR036950 Penicillin binding protein transglycosylase domain M28_RS07210 IPR001460 Penicillin-binding protein, transpeptidase M28_RS07210 IPR012338 Beta-lactamase/transpeptidase-like M28_RS07210 IPR023346 Lysozyme-like domain superfamily M28_RS07215 IPR038765 Papain-like cysteine peptidase superfamily M28_RS07215 IPR025660 Cysteine peptidase, histidine active site M28_RS07215 IPR004134 Peptidase C1B, bleomycin hydrolase M28_RS07215 IPR000169 Cysteine peptidase, cysteine active site M28_RS07220 IPR003694 NAD(+) synthetase M28_RS07220 IPR022310 NAD/GMP synthase M28_RS07220 IPR022926 NH(3)-dependent NAD(+) synthetase M28_RS07220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS07225 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase M28_RS07225 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain M28_RS07225 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain M28_RS07225 IPR013785 Aldolase-type TIM barrel M28_RS07225 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal M28_RS07225 IPR006405 Nicotinate phosphoribosyltransferase pncB-type M28_RS07225 IPR007229 Nicotinate phosphoribosyltransferase family M28_RS07230 IPR004841 Amino acid permease/ SLC12A domain M28_RS07235 IPR023753 FAD/NAD(P)-binding domain M28_RS07235 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS07235 IPR005982 Thioredoxin reductase M28_RS07235 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site M28_RS07245 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07245 IPR003439 ABC transporter-like M28_RS07245 IPR017871 ABC transporter, conserved site M28_RS07245 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M28_RS07245 IPR003593 AAA+ ATPase domain M28_RS07250 IPR035906 MetI-like superfamily M28_RS07250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS07250 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M28_RS07255 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07255 IPR030881 DEAD-box ATP-dependent RNA helicase CshB M28_RS07255 IPR011545 DEAD/DEAH box helicase domain M28_RS07255 IPR001650 Helicase, C-terminal M28_RS07255 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS07255 IPR014014 RNA helicase, DEAD-box type, Q motif M28_RS07260 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase M28_RS07260 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site M28_RS07260 IPR000715 Glycosyl transferase, family 4 M28_RS07265 IPR001460 Penicillin-binding protein, transpeptidase M28_RS07265 IPR005543 PASTA domain M28_RS07265 IPR012338 Beta-lactamase/transpeptidase-like M28_RS07265 IPR005311 Penicillin-binding protein, dimerisation domain M28_RS07265 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M28_RS07275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS07275 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily M28_RS07275 IPR002903 Ribosomal RNA small subunit methyltransferase H M28_RS07285 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site M28_RS07285 IPR000965 GPR domain M28_RS07285 IPR016161 Aldehyde/histidinol dehydrogenase M28_RS07285 IPR016163 Aldehyde dehydrogenase, C-terminal M28_RS07285 IPR016162 Aldehyde dehydrogenase, N-terminal M28_RS07285 IPR012134 Glutamate-5-semialdehyde dehydrogenase M28_RS07285 IPR015590 Aldehyde dehydrogenase domain M28_RS07290 IPR019797 Glutamate 5-kinase, conserved site M28_RS07290 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase M28_RS07290 IPR011529 Glutamate 5-kinase M28_RS07290 IPR041739 Glutamate-5-kinase domain M28_RS07290 IPR001057 Glutamate/acetylglutamate kinase M28_RS07290 IPR036393 Acetylglutamate kinase-like superfamily M28_RS07290 IPR001048 Aspartate/glutamate/uridylate kinase M28_RS07300 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07300 IPR003439 ABC transporter-like M28_RS07300 IPR003593 AAA+ ATPase domain M28_RS07310 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M28_RS07310 IPR020826 Transketolase binding site M28_RS07310 IPR005478 Transketolase, bacterial-like M28_RS07310 IPR029061 Thiamin diphosphate-binding fold M28_RS07310 IPR005475 Transketolase-like, pyrimidine-binding domain M28_RS07310 IPR033248 Transketolase, C-terminal domain M28_RS07310 IPR033247 Transketolase family M28_RS07310 IPR005474 Transketolase, N-terminal M28_RS07315 IPR013785 Aldolase-type TIM barrel M28_RS07315 IPR001585 Transaldolase/Fructose-6-phosphate aldolase M28_RS07315 IPR022999 Transaldolase type 3B, putative M28_RS07315 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase M28_RS07315 IPR018225 Transaldolase, active site M28_RS07315 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial M28_RS07325 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M28_RS07325 IPR023753 FAD/NAD(P)-binding domain M28_RS07325 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS07325 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M28_RS07330 IPR023271 Aquaporin-like M28_RS07330 IPR000425 Major intrinsic protein M28_RS07330 IPR022357 Major intrinsic protein, conserved site M28_RS07335 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase M28_RS07335 IPR031656 Alpha-glycerophosphate oxidase, C-terminal M28_RS07335 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily M28_RS07335 IPR006076 FAD dependent oxidoreductase M28_RS07335 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS07340 IPR018483 Carbohydrate kinase, FGGY, conserved site M28_RS07340 IPR018484 Carbohydrate kinase, FGGY, N-terminal M28_RS07340 IPR005999 Glycerol kinase M28_RS07340 IPR000577 Carbohydrate kinase, FGGY M28_RS07340 IPR018485 Carbohydrate kinase, FGGY, C-terminal M28_RS07345 IPR025711 PepSY domain M28_RS07350 IPR009242 Protein of unknown function DUF896 M28_RS07355 IPR015944 Glycine-tRNA ligase, beta subunit M28_RS07355 IPR006194 Glycine-tRNA synthetase, heterodimeric M28_RS07360 IPR006194 Glycine-tRNA synthetase, heterodimeric M28_RS07360 IPR002310 Glycine-tRNA ligase, alpha subunit M28_RS07370 IPR007269 Isoprenylcysteine carboxyl methyltransferase M28_RS07375 IPR023210 NADP-dependent oxidoreductase domain M28_RS07375 IPR036812 NADP-dependent oxidoreductase domain superfamily M28_RS07375 IPR020471 Aldo/keto reductase M28_RS07375 IPR018170 Aldo/keto reductase, conserved site M28_RS07380 IPR006680 Amidohydrolase-related M28_RS07380 IPR003764 N-acetylglucosamine-6-phosphate deacetylase M28_RS07380 IPR032466 Metal-dependent hydrolase M28_RS07380 IPR011059 Metal-dependent hydrolase, composite domain superfamily M28_RS07385 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein M28_RS07385 IPR003841 Sodium-dependent phosphate transport protein M28_RS07395 IPR003797 DegV M28_RS07400 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M28_RS07400 IPR001647 DNA-binding HTH domain, TetR-type M28_RS07400 IPR009057 Homeobox-like domain superfamily M28_RS07405 IPR000150 Cof family M28_RS07405 IPR036412 HAD-like superfamily M28_RS07405 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS07405 IPR023214 HAD superfamily M28_RS07410 IPR005115 Uncharacterised domain UPF0126 M28_RS07415 IPR002915 DeoC/FbaB/ lacD aldolase M28_RS07415 IPR005927 Tagatose 1,6-diphosphate aldolase M28_RS07415 IPR013785 Aldolase-type TIM barrel M28_RS07425 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family M28_RS07425 IPR004784 Galactose-6-phosphate isomerase subunit LacB M28_RS07425 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily M28_RS07430 IPR004783 Galactose-6-phosphate isomerase subunit LacA M28_RS07430 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family M28_RS07430 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily M28_RS07450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M28_RS07450 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS07450 IPR036390 Winged helix DNA-binding domain superfamily M28_RS07450 IPR014036 DeoR C-terminal sensor domain M28_RS07450 IPR001034 DeoR-type HTH domain M28_RS07450 IPR037171 NagB/RpiA transferase-like M28_RS07465 IPR023298 P-type ATPase, transmembrane domain superfamily M28_RS07465 IPR008250 P-type ATPase, A domain superfamily M28_RS07465 IPR018303 P-type ATPase, phosphorylation site M28_RS07465 IPR023299 P-type ATPase, cytoplasmic domain N M28_RS07465 IPR001757 P-type ATPase M28_RS07465 IPR027256 P-type ATPase, subfamily IB M28_RS07465 IPR036163 Heavy metal-associated domain superfamily M28_RS07465 IPR006121 Heavy metal-associated domain, HMA M28_RS07465 IPR023214 HAD superfamily M28_RS07465 IPR006122 Heavy metal-associated domain, copper ion-binding M28_RS07465 IPR036412 HAD-like superfamily M28_RS07465 IPR017969 Heavy-metal-associated, conserved site M28_RS07470 IPR014071 Copper transport repressor CopY/TcrY M28_RS07470 IPR036390 Winged helix DNA-binding domain superfamily M28_RS07470 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS07470 IPR005650 BlaI transcriptional regulatory family M28_RS07475 IPR002168 Lipase, GDXG, putative histidine active site M28_RS07475 IPR033140 Lipase, GDXG, putative serine active site M28_RS07475 IPR029058 Alpha/Beta hydrolase fold M28_RS07475 IPR013094 Alpha/beta hydrolase fold-3 M28_RS07480 IPR020053 Ribosome-binding factor A, conserved site M28_RS07480 IPR015946 K homology domain-like, alpha/beta M28_RS07480 IPR023799 Ribosome-binding factor A domain superfamily M28_RS07480 IPR000238 Ribosome-binding factor A M28_RS07485 IPR009000 Translation protein, beta-barrel domain superfamily M28_RS07485 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M28_RS07485 IPR023115 Translation initiation factor IF- 2, domain 3 M28_RS07485 IPR015760 Translation initiation factor IF- 2 M28_RS07485 IPR000178 Translation initiation factor aIF-2, bacterial-like M28_RS07485 IPR000795 Transcription factor, GTP-binding domain M28_RS07485 IPR005225 Small GTP-binding protein domain M28_RS07485 IPR006847 Translation initiation factor IF-2, N-terminal M28_RS07485 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07490 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 M28_RS07490 IPR039107 Ribosomal protein YlxQ M28_RS07490 IPR029064 50S ribosomal protein L30e-like M28_RS07490 IPR039109 Ribosomal protein L30/YlxQ M28_RS07495 IPR037465 Uncharacterized protein YlxR M28_RS07495 IPR035931 YlxR-like superfamily M28_RS07495 IPR007393 Domain of unknown function DUF448 M28_RS07500 IPR025249 KH domain, NusA-like M28_RS07500 IPR003029 S1 domain M28_RS07500 IPR022967 RNA-binding domain, S1 M28_RS07500 IPR036555 NusA, N-terminal domain superfamily M28_RS07500 IPR030842 Transcription termination/antitermination protein NusA, bacterial M28_RS07500 IPR010213 Transcription termination factor NusA M28_RS07500 IPR012340 Nucleic acid-binding, OB-fold M28_RS07500 IPR009019 K homology domain superfamily, prokaryotic type M28_RS07500 IPR013735 Transcription factor NusA, N-terminal M28_RS07500 IPR015946 K homology domain-like, alpha/beta M28_RS07500 IPR004087 K Homology domain M28_RS07505 IPR028989 Ribosome maturation factor RimP, N-terminal M28_RS07505 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily M28_RS07505 IPR035956 RimP, N-terminal domain superfamily M28_RS07505 IPR003728 Ribosome maturation factor RimP M28_RS07505 IPR028998 Ribosome maturation factor RimP, C-terminal M28_RS07515 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type M28_RS07515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS07525 IPR010288 Bacterial ABC transporter EcsB M28_RS07530 IPR003593 AAA+ ATPase domain M28_RS07530 IPR003439 ABC transporter-like M28_RS07530 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07535 IPR036265 HIT-like superfamily M28_RS07535 IPR011146 HIT-like domain M28_RS07535 IPR001310 Histidine triad (HIT) protein M28_RS07535 IPR019808 Histidine triad, conserved site M28_RS07535 IPR039384 HINT family M28_RS07545 IPR004474 Cell envelope-related transcriptional attenuator domain M28_RS07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07555 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE M28_RS07560 IPR006043 Xanthine/uracil/vitamin C permease M28_RS07560 IPR026033 Azaguanine-like transporters M28_RS07565 IPR023214 HAD superfamily M28_RS07565 IPR036412 HAD-like superfamily M28_RS07565 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS07565 IPR000150 Cof family M28_RS07570 IPR033887 PTS system mannose/sorbose specific IIA subunit M28_RS07570 IPR004701 Phosphotransferase system, mannose-type IIA component M28_RS07570 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily M28_RS07570 IPR004720 Phosphotransferase system, sorbose subfamily IIB component M28_RS07570 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily M28_RS07575 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit M28_RS07580 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component M28_RS07590 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M28_RS07590 IPR002317 Serine-tRNA ligase, type1 M28_RS07590 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily M28_RS07590 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS07590 IPR033729 Serine-tRNA ligase catalytic core domain M28_RS07590 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M28_RS07590 IPR015866 Serine-tRNA synthetase, type1, N-terminal M28_RS07595 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal M28_RS07595 IPR029045 ClpP/crotonase-like domain superfamily M28_RS07595 IPR001095 Acetyl-CoA carboxylase, alpha subunit M28_RS07600 IPR034733 Acetyl-CoA carboxylase M28_RS07600 IPR029045 ClpP/crotonase-like domain superfamily M28_RS07600 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal M28_RS07600 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit M28_RS07600 IPR041010 Acetyl-coA carboxylase zinc finger domain M28_RS07605 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M28_RS07605 IPR011761 ATP-grasp fold M28_RS07605 IPR005482 Biotin carboxylase, C-terminal M28_RS07605 IPR011764 Biotin carboxylation domain M28_RS07605 IPR016185 Pre-ATP-grasp domain superfamily M28_RS07605 IPR005481 Biotin carboxylase-like, N-terminal domain M28_RS07605 IPR011054 Rudiment single hybrid motif M28_RS07605 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase M28_RS07610 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ M28_RS07610 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ M28_RS07610 IPR029069 HotDog domain superfamily M28_RS07615 IPR001249 Acetyl-CoA biotin carboxyl carrier M28_RS07615 IPR011053 Single hybrid motif M28_RS07615 IPR000089 Biotin/lipoyl attachment M28_RS07615 IPR001882 Biotin-binding site M28_RS07620 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 M28_RS07620 IPR000794 Beta-ketoacyl synthase M28_RS07620 IPR014031 Beta-ketoacyl synthase, C-terminal M28_RS07620 IPR014030 Beta-ketoacyl synthase, N-terminal M28_RS07620 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M28_RS07620 IPR016039 Thiolase-like M28_RS07620 IPR018201 Beta-ketoacyl synthase, active site M28_RS07625 IPR036291 NAD(P)-binding domain superfamily M28_RS07625 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase M28_RS07625 IPR002347 Short-chain dehydrogenase/reductase SDR M28_RS07630 IPR001227 Acyl transferase domain superfamily M28_RS07630 IPR014043 Acyl transferase M28_RS07630 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M28_RS07630 IPR024925 Malonyl CoA-acyl carrier protein transacylase M28_RS07630 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type M28_RS07630 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M28_RS07635 IPR013785 Aldolase-type TIM barrel M28_RS07635 IPR004136 Nitronate monooxygenase M28_RS07640 IPR009081 Phosphopantetheine binding ACP domain M28_RS07640 IPR003231 Acyl carrier protein (ACP) M28_RS07640 IPR036736 ACP-like superfamily M28_RS07645 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M28_RS07645 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal M28_RS07645 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 M28_RS07645 IPR016039 Thiolase-like M28_RS07655 IPR001753 Enoyl-CoA hydratase/isomerase M28_RS07655 IPR029045 ClpP/crotonase-like domain superfamily M28_RS07655 IPR014748 Enoyl-CoA hydratase, C-terminal M28_RS07660 IPR036869 Chaperone J-domain superfamily M28_RS07660 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M28_RS07660 IPR001305 Heat shock protein DnaJ, cysteine-rich domain M28_RS07660 IPR008971 HSP40/DnaJ peptide-binding M28_RS07660 IPR018253 DnaJ domain, conserved site M28_RS07660 IPR001623 DnaJ domain M28_RS07660 IPR002939 Chaperone DnaJ, C-terminal M28_RS07660 IPR012724 Chaperone DnaJ M28_RS07665 IPR013126 Heat shock protein 70 family M28_RS07665 IPR012725 Chaperone DnaK M28_RS07665 IPR018181 Heat shock protein 70, conserved site M28_RS07665 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M28_RS07665 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M28_RS07670 IPR000740 GrpE nucleotide exchange factor M28_RS07670 IPR013805 GrpE nucleotide exchange factor, coiled-coil M28_RS07670 IPR009012 GrpE nucleotide exchange factor, head M28_RS07675 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain M28_RS07675 IPR036390 Winged helix DNA-binding domain superfamily M28_RS07675 IPR029016 GAF-like domain superfamily M28_RS07675 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily M28_RS07675 IPR002571 Heat-inducible transcription repressor HrcA M28_RS07675 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal M28_RS07675 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS07690 IPR013078 Histidine phosphatase superfamily, clade-1 M28_RS07690 IPR029033 Histidine phosphatase superfamily M28_RS07690 IPR005952 Phosphoglycerate mutase 1 M28_RS07690 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site M28_RS07695 IPR007341 Transglycosylase-associated protein M28_RS07705 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M28_RS07705 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site M28_RS07705 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 M28_RS07705 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit M28_RS07705 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 M28_RS07705 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like M28_RS07705 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic M28_RS07705 IPR018027 Asn/Gln amidotransferase M28_RS07705 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E M28_RS07710 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit M28_RS07710 IPR000120 Amidase M28_RS07710 IPR020556 Amidase, conserved site M28_RS07710 IPR036928 Amidase signature (AS) superfamily M28_RS07710 IPR023631 Amidase signature domain M28_RS07715 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C M28_RS07715 IPR003837 Glu-tRNAGln amidotransferase C subunit M28_RS07730 IPR000868 Isochorismatase-like M28_RS07730 IPR036380 Isochorismatase-like superfamily M28_RS07735 IPR036390 Winged helix DNA-binding domain superfamily M28_RS07735 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS07735 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal M28_RS07735 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal M28_RS07735 IPR029016 GAF-like domain superfamily M28_RS07735 IPR011991 ArsR-like helix-turn-helix domain M28_RS07735 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY M28_RS07740 IPR004839 Aminotransferase, class I/classII M28_RS07740 IPR015424 Pyridoxal phosphate-dependent transferase M28_RS07740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M28_RS07740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M28_RS07750 IPR036412 HAD-like superfamily M28_RS07750 IPR023214 HAD superfamily M28_RS07750 IPR006379 HAD-superfamily hydrolase, subfamily IIB M28_RS07755 IPR020827 Asparaginase/glutaminase, active site 1 M28_RS07755 IPR027475 Asparaginase/glutaminase, active site 2 M28_RS07755 IPR037152 L-asparaginase, N-terminal domain superfamily M28_RS07755 IPR027474 L-asparaginase, N-terminal M28_RS07755 IPR040919 Asparaginase/glutaminase, C-terminal M28_RS07755 IPR036152 Asparaginase/glutaminase-like superfamily M28_RS07755 IPR004550 L-asparaginase, type II M28_RS07755 IPR006034 Asparaginase/glutaminase-like M28_RS07755 IPR027473 L-asparaginase, C-terminal M28_RS07765 IPR017871 ABC transporter, conserved site M28_RS07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07765 IPR003439 ABC transporter-like M28_RS07765 IPR003593 AAA+ ATPase domain M28_RS07770 IPR004609 ATP-dependent DNA helicase RecG M28_RS07770 IPR011545 DEAD/DEAH box helicase domain M28_RS07770 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS07770 IPR001650 Helicase, C-terminal M28_RS07770 IPR012340 Nucleic acid-binding, OB-fold M28_RS07770 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07770 IPR033454 RecG, wedge domain M28_RS07780 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07780 IPR003439 ABC transporter-like M28_RS07780 IPR003593 AAA+ ATPase domain M28_RS07780 IPR017871 ABC transporter, conserved site M28_RS07795 IPR003593 AAA+ ATPase domain M28_RS07795 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07795 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS07795 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC M28_RS07795 IPR011527 ABC transporter type 1, transmembrane domain M28_RS07795 IPR003439 ABC transporter-like M28_RS07800 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS07800 IPR003439 ABC transporter-like M28_RS07800 IPR011527 ABC transporter type 1, transmembrane domain M28_RS07800 IPR003593 AAA+ ATPase domain M28_RS07800 IPR017871 ABC transporter, conserved site M28_RS07800 IPR011917 ABC transporter, lipid A export, MsbA M28_RS07800 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07800 IPR039421 Type I protein exporter M28_RS07805 IPR003593 AAA+ ATPase domain M28_RS07805 IPR003439 ABC transporter-like M28_RS07805 IPR017871 ABC transporter, conserved site M28_RS07805 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07810 IPR037294 ABC transporter, BtuC-like M28_RS07810 IPR000522 ABC transporter, permease protein, BtuC-like M28_RS07815 IPR002491 ABC transporter periplasmic binding domain M28_RS07815 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE M28_RS07830 IPR036779 LysM domain superfamily M28_RS07830 IPR007921 CHAP domain M28_RS07830 IPR038765 Papain-like cysteine peptidase superfamily M28_RS07830 IPR018392 LysM domain M28_RS07835 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site M28_RS07835 IPR011079 Alanine racemase, C-terminal M28_RS07835 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M28_RS07835 IPR000821 Alanine racemase M28_RS07835 IPR001608 Alanine racemase, N-terminal M28_RS07835 IPR029066 PLP-binding barrel M28_RS07840 IPR008278 4'-phosphopantetheinyl transferase domain M28_RS07840 IPR037143 4'-phosphopantetheinyl transferase domain superfamily M28_RS07840 IPR002582 Holo-[acyl carrier protein] synthase M28_RS07840 IPR004568 Phosphopantetheine-protein transferase domain M28_RS07845 IPR004027 SEC-C motif M28_RS07845 IPR020937 SecA conserved site M28_RS07845 IPR036670 SecA, preprotein cross-linking domain superfamily M28_RS07845 IPR036266 SecA, Wing/Scaffold superfamily M28_RS07845 IPR011116 SecA Wing/Scaffold M28_RS07845 IPR014018 SecA motor DEAD M28_RS07845 IPR000185 Protein translocase subunit SecA M28_RS07845 IPR011130 SecA, preprotein cross-linking domain M28_RS07845 IPR011115 SecA DEAD-like, N-terminal M28_RS07845 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07850 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form M28_RS07850 IPR011051 RmlC-like cupin domain superfamily M28_RS07850 IPR014710 RmlC-like jelly roll fold M28_RS07850 IPR001250 Mannose-6-phosphate isomerase, type I M28_RS07855 IPR000600 ROK family M28_RS07860 IPR017853 Glycoside hydrolase superfamily M28_RS07860 IPR001579 Glycoside hydrolase, chitinase active site M28_RS07865 IPR003352 Phosphotransferase system, EIIC M28_RS07865 IPR013013 Phosphotransferase system, EIIC component, type 1 M28_RS07865 IPR011055 Duplicated hybrid motif M28_RS07865 IPR036878 Glucose permease domain IIB M28_RS07865 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M28_RS07865 IPR001996 Phosphotransferase system, IIB component, type 1 M28_RS07865 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M28_RS07865 IPR010973 Phosphotransferase system, sucrose-specific IIBC component M28_RS07870 IPR013148 Glycosyl hydrolase family 32, N-terminal M28_RS07870 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily M28_RS07870 IPR001362 Glycoside hydrolase, family 32 M28_RS07870 IPR018053 Glycoside hydrolase, family 32, active site M28_RS07870 IPR006232 Sucrose-6-phosphate hydrolase M28_RS07870 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily M28_RS07870 IPR013189 Glycosyl hydrolase family 32, C-terminal M28_RS07875 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS07875 IPR000843 LacI-type HTH domain M28_RS07875 IPR028082 Periplasmic binding protein-like I M28_RS07880 IPR011605 NusB antitermination factor M28_RS07880 IPR006027 NusB/RsmB/TIM44 M28_RS07880 IPR035926 NusB-like superfamily M28_RS07885 IPR005531 Alkaline shock protein Asp23 M28_RS07890 IPR008991 Translation protein SH3-like domain superfamily M28_RS07890 IPR011768 Translation elongation factor P M28_RS07890 IPR014722 Ribosomal protein L2, domain 2 M28_RS07890 IPR020599 Translation elongation factor P/YeiP M28_RS07890 IPR012340 Nucleic acid-binding, OB-fold M28_RS07890 IPR013185 Translation elongation factor, KOW-like M28_RS07890 IPR001059 Translation elongation factor P/YeiP, central M28_RS07890 IPR015365 Elongation factor P, C-terminal M28_RS07890 IPR013852 Translation elongation factor P/YeiP, conserved site M28_RS07895 IPR016193 Cytidine deaminase-like M28_RS07895 IPR015517 Deoxycytidylate deaminase-related M28_RS07895 IPR035105 Deoxycytidylate deaminase domain M28_RS07895 IPR016192 APOBEC/CMP deaminase, zinc-binding M28_RS07895 IPR002125 Cytidine and deoxycytidylate deaminase domain M28_RS07895 IPR013404 Competence operon E, ComEB M28_RS07900 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M28_RS07900 IPR036005 Creatinase/aminopeptidase-like M28_RS07900 IPR000587 Creatinase, N-terminal M28_RS07900 IPR000994 Peptidase M24 M28_RS07900 IPR001714 Peptidase M24, methionine aminopeptidase M28_RS07900 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M28_RS07905 IPR003439 ABC transporter-like M28_RS07905 IPR003593 AAA+ ATPase domain M28_RS07905 IPR017871 ABC transporter, conserved site M28_RS07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07905 IPR041552 UvrA DNA-binding domain M28_RS07905 IPR004602 UvrABC system subunit A M28_RS07905 IPR041102 UvrA, interaction domain M28_RS07920 IPR036870 Ribosomal protein S18 superfamily M28_RS07920 IPR018275 Ribosomal protein S18, conserved site M28_RS07920 IPR001648 Ribosomal protein S18 M28_RS07925 IPR012340 Nucleic acid-binding, OB-fold M28_RS07925 IPR011344 Single-stranded DNA-binding protein M28_RS07925 IPR000424 Primosome PriB/single-strand DNA-binding M28_RS07930 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M28_RS07930 IPR000529 Ribosomal protein S6 M28_RS07930 IPR020814 Ribosomal protein S6, plastid/chloroplast M28_RS07930 IPR035980 Ribosomal protein S6 superfamily M28_RS07940 IPR011257 DNA glycosylase M28_RS07940 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif M28_RS07940 IPR015797 NUDIX hydrolase-like domain superfamily M28_RS07940 IPR005760 A/G-specific adenine glycosylase MutY M28_RS07940 IPR029119 MutY, C-terminal M28_RS07940 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M28_RS07940 IPR003265 HhH-GPD domain M28_RS07950 IPR013766 Thioredoxin domain M28_RS07950 IPR017937 Thioredoxin, conserved site M28_RS07950 IPR036249 Thioredoxin-like superfamily M28_RS07950 IPR005746 Thioredoxin M28_RS07960 IPR000432 DNA mismatch repair protein MutS, C-terminal M28_RS07960 IPR007696 DNA mismatch repair protein MutS, core M28_RS07960 IPR002625 Smr domain M28_RS07960 IPR036187 DNA mismatch repair protein MutS, core domain superfamily M28_RS07960 IPR036063 Smr domain superfamily M28_RS07960 IPR005747 Endonuclease MutS2 M28_RS07960 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07975 IPR024567 Ribonuclease HII/HIII domain M28_RS07975 IPR004641 Ribonuclease HIII M28_RS07975 IPR024568 Ribonuclease HIII, N-terminal M28_RS07975 IPR001352 Ribonuclease HII/HIII M28_RS07975 IPR012337 Ribonuclease H-like superfamily M28_RS07975 IPR036397 Ribonuclease H superfamily M28_RS07975 IPR012295 TBP domain superfamily M28_RS07980 IPR000223 Peptidase S26A, signal peptidase I M28_RS07980 IPR019757 Peptidase S26A, signal peptidase I, lysine active site M28_RS07980 IPR019756 Peptidase S26A, signal peptidase I, serine active site M28_RS07980 IPR019533 Peptidase S26 M28_RS07980 IPR036286 LexA/Signal peptidase-like superfamily M28_RS07985 IPR041451 RecD-like DNA helicase, SH3 domain M28_RS07985 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS07985 IPR006345 RecD-like DNA helicase M28_RS07985 IPR003593 AAA+ ATPase domain M28_RS07985 IPR027785 UvrD-like helicase C-terminal domain M28_RS07985 IPR029493 RecD helicase-like helix-hairpin-helix domain M28_RS07995 IPR017961 DNA polymerase, Y-family, little finger domain M28_RS07995 IPR001126 UmuC domain M28_RS07995 IPR022880 DNA polymerase IV M28_RS07995 IPR024728 DNA polymerase type-Y, HhH motif M28_RS07995 IPR036775 DNA polymerase, Y-family, little finger domain superfamily M28_RS08000 IPR005949 Formate acetyltransferase M28_RS08000 IPR001150 Glycine radical domain M28_RS08000 IPR004184 Pyruvate formate lyase domain M28_RS08000 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M28_RS08005 IPR022849 Peptidase S12, YfeW/YbbE-like M28_RS08005 IPR001466 Beta-lactamase-related M28_RS08005 IPR012338 Beta-lactamase/transpeptidase-like M28_RS08020 IPR000425 Major intrinsic protein M28_RS08020 IPR022357 Major intrinsic protein, conserved site M28_RS08020 IPR023271 Aquaporin-like M28_RS08030 IPR036259 MFS transporter superfamily M28_RS08030 IPR011701 Major facilitator superfamily M28_RS08030 IPR020846 Major facilitator superfamily domain M28_RS08035 IPR012318 Crp-type HTH domain M28_RS08035 IPR014710 RmlC-like jelly roll fold M28_RS08035 IPR036390 Winged helix DNA-binding domain superfamily M28_RS08035 IPR018335 Transcription regulator HTH, Crp-type, conserved site M28_RS08035 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08035 IPR018490 Cyclic nucleotide-binding-like M28_RS08040 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal M28_RS08040 IPR029058 Alpha/Beta hydrolase fold M28_RS08040 IPR008979 Galactose-binding-like domain superfamily M28_RS08040 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain M28_RS08040 IPR036313 PepX, N-terminal domain superfamily M28_RS08040 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain M28_RS08040 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase M28_RS08055 IPR004401 Nucleoid-associated protein YbaB/EbfC family M28_RS08055 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M28_RS08060 IPR012925 TipAS antibiotic-recognition domain M28_RS08060 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain M28_RS08060 IPR000551 MerR-type HTH domain M28_RS08060 IPR009061 Putative DNA-binding domain superfamily M28_RS08065 IPR012340 Nucleic acid-binding, OB-fold M28_RS08065 IPR036397 Ribonuclease H superfamily M28_RS08065 IPR012337 Ribonuclease H-like superfamily M28_RS08065 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type M28_RS08065 IPR003141 Polymerase/histidinol phosphatase, N-terminal M28_RS08065 IPR004013 PHP domain M28_RS08065 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M28_RS08065 IPR013520 Exonuclease, RNase T/DNA polymerase III M28_RS08065 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M28_RS08065 IPR029460 DNA polymerase, helix-hairpin-helix motif M28_RS08065 IPR024754 DNA polymerase III polC-like, N-terminal domain II M28_RS08065 IPR040982 DNA polymerase III alpha subunit finger domain M28_RS08065 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M28_RS08070 IPR013196 Helix-turn-helix, type 11 M28_RS08070 IPR007489 Domain of unknown function DUF536 M28_RS08095 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like M28_RS08095 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS08095 IPR023166 HI0933-like insert domain superfamily M28_RS08100 IPR013785 Aldolase-type TIM barrel M28_RS08100 IPR011343 Deoxyribose-phosphate aldolase M28_RS08100 IPR002915 DeoC/FbaB/ lacD aldolase M28_RS08100 IPR028581 Deoxyribose-phosphate aldolase type I M28_RS08105 IPR002668 Concentrative nucleoside transporter N-terminal domain M28_RS08105 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M28_RS08105 IPR011657 Concentrative nucleoside transporter C-terminal domain M28_RS08105 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M28_RS08105 IPR008276 Concentrative nucleoside transporter M28_RS08110 IPR000845 Nucleoside phosphorylase domain M28_RS08110 IPR010058 Uridine phosphorylase M28_RS08110 IPR018016 Nucleoside phosphorylase, conserved site M28_RS08110 IPR035994 Nucleoside phosphorylase superfamily M28_RS08120 IPR001209 Ribosomal protein S14 M28_RS08120 IPR023036 Ribosomal protein S14, bacterial/plastid M28_RS08125 IPR017861 Kae1/TsaD family M28_RS08125 IPR000905 Gcp-like domain M28_RS08125 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD M28_RS08130 IPR000182 GNAT domain M28_RS08130 IPR016181 Acyl-CoA N-acyltransferase M28_RS08130 IPR006464 N-acetyltransferase RimI/Ard1 M28_RS08135 IPR000905 Gcp-like domain M28_RS08135 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB M28_RS08140 IPR009907 Protein of unknown function DUF1447 M28_RS08145 IPR041636 Ribonuclease J, C-terminal M28_RS08145 IPR001587 Ribonuclease J, conserved site M28_RS08145 IPR001279 Metallo-beta-lactamase M28_RS08145 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M28_RS08145 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain M28_RS08145 IPR004613 Ribonuclease J M28_RS08145 IPR042173 Ribonuclease J, domain 2 M28_RS08145 IPR030854 Ribonuclease J, bacteria M28_RS08150 IPR008147 Glutamine synthetase, beta-Grasp domain M28_RS08150 IPR036651 Glutamine synthetase, N-terminal domain superfamily M28_RS08150 IPR004809 Glutamine synthetase type I M28_RS08150 IPR008146 Glutamine synthetase, catalytic domain M28_RS08150 IPR027303 Glutamine synthetase, glycine-rich site M28_RS08150 IPR027302 Glutamine synthetase, N-terminal conserved site M28_RS08150 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M28_RS08155 IPR000551 MerR-type HTH domain M28_RS08155 IPR009061 Putative DNA-binding domain superfamily M28_RS08165 IPR001576 Phosphoglycerate kinase M28_RS08165 IPR015911 Phosphoglycerate kinase, conserved site M28_RS08165 IPR036043 Phosphoglycerate kinase superfamily M28_RS08165 IPR015824 Phosphoglycerate kinase, N-terminal M28_RS08170 IPR036412 HAD-like superfamily M28_RS08170 IPR005519 Acid phosphatase, class B-like M28_RS08170 IPR023214 HAD superfamily M28_RS08170 IPR006423 5-nucleotidase lipoprotein e(P4) M28_RS08180 IPR033470 Uncharacterised protein, DhaK domain M28_RS08180 IPR036117 DhaL domain superfamily M28_RS08180 IPR004007 DhaL domain M28_RS08180 IPR019986 DAK2 domain-containing protein YloV M28_RS08185 IPR005531 Alkaline shock protein Asp23 M28_RS08190 IPR001383 Ribosomal protein L28 M28_RS08190 IPR037147 Ribosomal protein L28/L24 superfamily M28_RS08190 IPR026569 Ribosomal protein L28/L24 M28_RS08190 IPR034704 L28p-like M28_RS08195 IPR013785 Aldolase-type TIM barrel M28_RS08195 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 M28_RS08195 IPR000771 Fructose-bisphosphate aldolase, class-II M28_RS08210 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08210 IPR033828 CTP synthase GATase domain M28_RS08210 IPR017926 Glutamine amidotransferase M28_RS08210 IPR017456 CTP synthase, N-terminal M28_RS08210 IPR004468 CTP synthase M28_RS08210 IPR029062 Class I glutamine amidotransferase-like M28_RS08215 IPR007759 HB1/Asxl, restriction endonuclease HTH domain M28_RS08215 IPR029757 DNA-directed RNA polymerase subunit delta M28_RS08215 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily M28_RS08220 IPR008880 Trigger factor, C-terminal M28_RS08220 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M28_RS08220 IPR037041 Trigger factor, C-terminal domain superfamily M28_RS08220 IPR036611 Trigger factor ribosome-binding domain superfamily M28_RS08220 IPR027304 Trigger factor/SurA domain superfamily M28_RS08220 IPR005215 Trigger factor M28_RS08220 IPR008881 Trigger factor, ribosome-binding, bacterial M28_RS08225 IPR023408 Mechanosensitive ion channel MscS domain superfamily M28_RS08225 IPR010920 LSM domain superfamily M28_RS08225 IPR006685 Mechanosensitive ion channel MscS M28_RS08225 IPR011066 Mechanosensitive ion channel MscS, C-terminal M28_RS08225 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M28_RS08230 IPR028345 Aminoglycoside 3-N-acetyltransferase-like M28_RS08230 IPR006340 Protein of unknown function DUF436 M28_RS08235 IPR009825 ECF transporter, substrate-specific component-like M28_RS08240 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase M28_RS08240 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase M28_RS08240 IPR029056 Ribokinase-like M28_RS08245 IPR020095 Pseudouridine synthase I, TruA, C-terminal M28_RS08245 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS08245 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain M28_RS08245 IPR001406 Pseudouridine synthase I, TruA M28_RS08285 IPR018197 Glycerate kinase, restriction-enzyme-like fold M28_RS08285 IPR018193 Glycerate kinase, flavodoxin-like fold M28_RS08285 IPR036129 Glycerate kinase superfamily M28_RS08285 IPR004381 Glycerate kinase M28_RS08290 IPR014001 Helicase superfamily 1/2, ATP-binding domain M28_RS08290 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08290 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal M28_RS08290 IPR040980 SWI2/SNF2 ATPase M28_RS08290 IPR022625 Type-1 restriction enzyme R protein, C-terminal M28_RS08290 IPR004473 Restriction endonuclease, type I, HsdR M28_RS08300 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M28_RS08300 IPR004546 Restriction endonuclease, type I, HsdM M28_RS08300 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M28_RS08300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS08300 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M28_RS08300 IPR003356 DNA methylase, adenine-specific M28_RS08320 IPR027022 ABC transporter permease protein, BceB-type M28_RS08320 IPR003838 ABC transporter permease protein domain M28_RS08325 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08325 IPR003593 AAA+ ATPase domain M28_RS08325 IPR003439 ABC transporter-like M28_RS08330 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08330 IPR011917 ABC transporter, lipid A export, MsbA M28_RS08330 IPR003593 AAA+ ATPase domain M28_RS08330 IPR011527 ABC transporter type 1, transmembrane domain M28_RS08330 IPR017871 ABC transporter, conserved site M28_RS08330 IPR039421 Type I protein exporter M28_RS08330 IPR003439 ABC transporter-like M28_RS08330 IPR036640 ABC transporter type 1, transmembrane domain superfamily M28_RS08340 IPR007682 Lantibiotic, type A, Lactobacillales-type M28_RS08345 IPR001360 Glycoside hydrolase family 1 M28_RS08345 IPR018120 Glycoside hydrolase family 1, active site M28_RS08345 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M28_RS08345 IPR017853 Glycoside hydrolase superfamily M28_RS08345 IPR005928 6-phospho-beta-galactosidase M28_RS08350 IPR004501 Phosphotransferase system, EIIC component, type 3 M28_RS08350 IPR013012 Phosphotransferase system, EIIB component, type 3 M28_RS08350 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS08350 IPR036095 PTS system IIB component-like superfamily M28_RS08350 IPR004801 Phosphotransferase system, lactose-specific IIC component M28_RS08350 IPR041713 PTS system lactose-specific EIICB component, IIB domain M28_RS08350 IPR003352 Phosphotransferase system, EIIC M28_RS08355 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit M28_RS08355 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily M28_RS08360 IPR002915 DeoC/FbaB/ lacD aldolase M28_RS08360 IPR005927 Tagatose 1,6-diphosphate aldolase M28_RS08360 IPR013785 Aldolase-type TIM barrel M28_RS08365 IPR017583 Tagatose/fructose phosphokinase M28_RS08365 IPR029056 Ribokinase-like M28_RS08365 IPR011611 Carbohydrate kinase PfkB M28_RS08365 IPR005926 Tagatose-6-phosphate kinase M28_RS08365 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M28_RS08370 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily M28_RS08370 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family M28_RS08370 IPR004784 Galactose-6-phosphate isomerase subunit LacB M28_RS08375 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily M28_RS08375 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family M28_RS08375 IPR004783 Galactose-6-phosphate isomerase subunit LacA M28_RS08380 IPR014036 DeoR C-terminal sensor domain M28_RS08380 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M28_RS08380 IPR037171 NagB/RpiA transferase-like M28_RS08380 IPR036390 Winged helix DNA-binding domain superfamily M28_RS08380 IPR001034 DeoR-type HTH domain M28_RS08380 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08400 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS08400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS08400 IPR023035 Ribosomal protein S9, bacterial/plastid M28_RS08400 IPR020574 Ribosomal protein S9, conserved site M28_RS08400 IPR000754 Ribosomal protein S9 M28_RS08405 IPR005822 Ribosomal protein L13 M28_RS08405 IPR005823 Ribosomal protein L13, bacterial-type M28_RS08405 IPR023563 Ribosomal protein L13, conserved site M28_RS08405 IPR036899 Ribosomal protein L13 superfamily M28_RS08410 IPR001387 Cro/C1-type helix-turn-helix domain M28_RS08410 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M28_RS08420 IPR003797 DegV M28_RS08430 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M28_RS08430 IPR013123 RNA 2-O ribose methyltransferase, substrate binding M28_RS08430 IPR001537 tRNA/rRNA methyltransferase, SpoU type M28_RS08430 IPR004441 RNA methyltransferase TrmH family M28_RS08430 IPR029064 50S ribosomal protein L30e-like M28_RS08430 IPR029028 Alpha/beta knot methyltransferases M28_RS08440 IPR008226 Mini-ribonuclease 3 family M28_RS08440 IPR000999 Ribonuclease III domain M28_RS08440 IPR036389 Ribonuclease III, endonuclease domain superfamily M28_RS08445 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase M28_RS08445 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M28_RS08445 IPR032678 tRNA synthetases class I, catalytic domain M28_RS08445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS08445 IPR015803 Cysteine-tRNA ligase M28_RS08445 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR M28_RS08460 IPR042122 Serine acetyltransferase, N-terminal domain superfamily M28_RS08460 IPR005881 Serine O-acetyltransferase M28_RS08460 IPR010493 Serine acetyltransferase, N-terminal M28_RS08460 IPR011004 Trimeric LpxA-like superfamily M28_RS08460 IPR001451 Hexapeptide repeat M28_RS08460 IPR018357 Hexapeptide transferase, conserved site M28_RS08470 IPR015847 Exoribonuclease, phosphorolytic domain 2 M28_RS08470 IPR001247 Exoribonuclease, phosphorolytic domain 1 M28_RS08470 IPR036345 Exoribonuclease, PH domain 2 superfamily M28_RS08470 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS08470 IPR036612 K Homology domain, type 1 superfamily M28_RS08470 IPR004088 K Homology domain, type 1 M28_RS08470 IPR003029 S1 domain M28_RS08470 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily M28_RS08470 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain M28_RS08470 IPR027408 PNPase/RNase PH domain superfamily M28_RS08470 IPR022967 RNA-binding domain, S1 M28_RS08470 IPR012162 Polyribonucleotide nucleotidyltransferase M28_RS08470 IPR004087 K Homology domain M28_RS08470 IPR012340 Nucleic acid-binding, OB-fold M28_RS08475 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial M28_RS08475 IPR013785 Aldolase-type TIM barrel M28_RS08475 IPR001585 Transaldolase/Fructose-6-phosphate aldolase M28_RS08475 IPR022999 Transaldolase type 3B, putative M28_RS08475 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase M28_RS08475 IPR018225 Transaldolase, active site M28_RS08480 IPR004703 Phosphotransferase system, sugar-specific permease component M28_RS08485 IPR036095 PTS system IIB component-like superfamily M28_RS08485 IPR013011 Phosphotransferase system, EIIB component, type 2 M28_RS08485 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS08490 IPR007737 Mga helix-turn-helix domain M28_RS08490 IPR011608 PRD domain M28_RS08490 IPR036634 PRD domain superfamily M28_RS08490 IPR016152 Phosphotransferase/anion transporter M28_RS08490 IPR013196 Helix-turn-helix, type 11 M28_RS08490 IPR002178 PTS EIIA type-2 domain M28_RS08490 IPR036095 PTS system IIB component-like superfamily M28_RS08490 IPR013011 Phosphotransferase system, EIIB component, type 2 M28_RS08490 IPR036390 Winged helix DNA-binding domain superfamily M28_RS08490 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08490 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS08495 IPR000589 Ribosomal protein S15 M28_RS08495 IPR005290 Ribosomal protein S15, bacterial-type M28_RS08495 IPR009068 S15/NS1, RNA-binding M28_RS08510 IPR023635 Peptide deformylase M28_RS08510 IPR036821 Peptide deformylase superfamily M28_RS08515 IPR029039 Flavoprotein-like superfamily M28_RS08515 IPR005025 NADPH-dependent FMN reductase-like M28_RS08520 IPR000835 MarR-type HTH domain M28_RS08520 IPR023187 Transcriptional regulator MarR-type, conserved site M28_RS08520 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08520 IPR036390 Winged helix DNA-binding domain superfamily M28_RS08525 IPR013520 Exonuclease, RNase T/DNA polymerase III M28_RS08525 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M28_RS08525 IPR040982 DNA polymerase III alpha subunit finger domain M28_RS08525 IPR024754 DNA polymerase III polC-like, N-terminal domain II M28_RS08525 IPR003141 Polymerase/histidinol phosphatase, N-terminal M28_RS08525 IPR016195 Polymerase/histidinol phosphatase-like M28_RS08525 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type M28_RS08525 IPR012337 Ribonuclease H-like superfamily M28_RS08525 IPR036397 Ribonuclease H superfamily M28_RS08525 IPR028112 DNA polymerase III polC-type, N-terminal domain I M28_RS08525 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M28_RS08525 IPR029460 DNA polymerase, helix-hairpin-helix motif M28_RS08525 IPR012340 Nucleic acid-binding, OB-fold M28_RS08525 IPR004013 PHP domain M28_RS08530 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M28_RS08530 IPR036621 Anticodon-binding domain superfamily M28_RS08530 IPR004154 Anticodon-binding M28_RS08530 IPR002316 Proline-tRNA ligase, class IIa M28_RS08530 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type M28_RS08530 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS08530 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 M28_RS08530 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain M28_RS08530 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily M28_RS08535 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase M28_RS08535 IPR001478 PDZ domain M28_RS08535 IPR008915 Peptidase M50 M28_RS08535 IPR036034 PDZ superfamily M28_RS08540 IPR000374 Phosphatidate cytidylyltransferase M28_RS08545 IPR001441 Decaprenyl diphosphate synthase-like M28_RS08545 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site M28_RS08545 IPR036424 Decaprenyl diphosphate synthase-like superfamily M28_RS08550 IPR003849 Preprotein translocase YajC M28_RS08560 IPR013783 Immunoglobulin-like fold M28_RS08560 IPR014756 Immunoglobulin E-set M28_RS08560 IPR040697 Pullulanase, N1 domain M28_RS08560 IPR013780 Glycosyl hydrolase, all-beta M28_RS08560 IPR004193 Glycoside hydrolase, family 13, N-terminal M28_RS08560 IPR017853 Glycoside hydrolase superfamily M28_RS08560 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M28_RS08560 IPR011840 Pullulanase, type I M28_RS08570 IPR017853 Glycoside hydrolase superfamily M28_RS08570 IPR013780 Glycosyl hydrolase, all-beta M28_RS08570 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M28_RS08575 IPR003593 AAA+ ATPase domain M28_RS08575 IPR005116 Transport-associated OB, type 1 M28_RS08575 IPR017871 ABC transporter, conserved site M28_RS08575 IPR008995 Molybdate/tungstate binding, C-terminal M28_RS08575 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08575 IPR003439 ABC transporter-like M28_RS08575 IPR040582 MalK, OB fold domain M28_RS08580 IPR025736 PucR C-terminal helix-turn-helix domain M28_RS08580 IPR009057 Homeobox-like domain superfamily M28_RS08585 IPR008124 Streptokinase M28_RS08585 IPR004093 Staphylokinase/Streptokinase M28_RS08585 IPR036120 Staphylokinase/Streptokinase superfamily M28_RS08590 IPR003732 D-aminoacyl-tRNA deacylase DTD M28_RS08590 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M28_RS08595 IPR012676 TGS-like M28_RS08595 IPR033655 RelA, TGS domain M28_RS08595 IPR004095 TGS M28_RS08595 IPR003607 HD/PDEase domain M28_RS08595 IPR004811 RelA/SpoT family M28_RS08595 IPR012675 Beta-grasp domain superfamily M28_RS08595 IPR002912 ACT domain M28_RS08595 IPR007685 RelA/SpoT M28_RS08600 IPR005877 YSIRK Gram-positive signal peptide M28_RS08600 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS08600 IPR019950 M protein-type anchor domain M28_RS08600 IPR019931 LPXTG cell wall anchor domain M28_RS08605 IPR029039 Flavoprotein-like superfamily M28_RS08605 IPR004465 Ribonucleotide reductase Class Ib, NrdI M28_RS08610 IPR005135 Endonuclease/exonuclease/phosphatase M28_RS08610 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M28_RS08615 IPR003352 Phosphotransferase system, EIIC M28_RS08615 IPR011300 Phosphotransferase system, IIBC component M28_RS08615 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M28_RS08615 IPR036878 Glucose permease domain IIB M28_RS08615 IPR011055 Duplicated hybrid motif M28_RS08615 IPR001996 Phosphotransferase system, IIB component, type 1 M28_RS08615 IPR013013 Phosphotransferase system, EIIC component, type 1 M28_RS08615 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M28_RS08620 IPR029028 Alpha/beta knot methyltransferases M28_RS08620 IPR006700 Ribosomal RNA small subunit methyltransferase E M28_RS08620 IPR015947 PUA-like superfamily M28_RS08620 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M28_RS08625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M28_RS08625 IPR004498 Ribosomal protein L11 methyltransferase M28_RS08635 IPR005801 ADC synthase M28_RS08635 IPR015890 Chorismate-utilising enzyme, C-terminal M28_RS08635 IPR006805 Anthranilate synthase component I, N-terminal M28_RS08635 IPR019999 Anthranilate synthase component I-like M28_RS08640 IPR029062 Class I glutamine amidotransferase-like M28_RS08640 IPR017926 Glutamine amidotransferase M28_RS08640 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain M28_RS08645 IPR008824 RuvB-like P-loop domain M28_RS08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08645 IPR021886 MgsA AAA+ ATPase C-terminal M28_RS08645 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M28_RS08645 IPR032423 AAA C-terminal domain M28_RS08645 IPR003593 AAA+ ATPase domain M28_RS08670 IPR006177 Staphylococcal/streptococcal toxin, bacterial M28_RS08670 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial M28_RS08670 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold M28_RS08670 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site M28_RS08670 IPR008992 Enterotoxin M28_RS08670 IPR016091 Superantigen toxin, C-terminal M28_RS08670 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain M28_RS08675 IPR030678 Peptide/nickel binding protein, MppA-type M28_RS08675 IPR023765 Solute-binding protein family 5, conserved site M28_RS08675 IPR039424 Solute-binding protein family 5 M28_RS08675 IPR000914 Solute-binding protein family 5 domain M28_RS08680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS08680 IPR035906 MetI-like superfamily M28_RS08685 IPR035906 MetI-like superfamily M28_RS08685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M28_RS08690 IPR022216 Putative ABC cobalt transporter M28_RS08690 IPR003439 ABC transporter-like M28_RS08690 IPR017871 ABC transporter, conserved site M28_RS08690 IPR003593 AAA+ ATPase domain M28_RS08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08695 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08695 IPR003439 ABC transporter-like M28_RS08695 IPR003593 AAA+ ATPase domain M28_RS08700 IPR036629 YjbJ superfamily M28_RS08700 IPR008462 CsbD-like domain M28_RS08710 IPR006128 Adhesion lipoprotein M28_RS08710 IPR006129 Adhesin B M28_RS08710 IPR006127 Periplasmic solute binding protein, ZnuA-like M28_RS08715 IPR032806 H repeat-associated protein, N-terminal M28_RS08715 IPR002559 Transposase, IS4-like M28_RS08725 IPR022398 Peptidase S8, subtilisin, His-active site M28_RS08725 IPR015500 Peptidase S8, subtilisin-related M28_RS08725 IPR023827 Peptidase S8, subtilisin, Asp-active site M28_RS08725 IPR023828 Peptidase S8, subtilisin, Ser-active site M28_RS08725 IPR000209 Peptidase S8/S53 domain M28_RS08725 IPR003137 PA domain M28_RS08725 IPR019931 LPXTG cell wall anchor domain M28_RS08725 IPR013783 Immunoglobulin-like fold M28_RS08725 IPR010435 Fn3-like domain M28_RS08725 IPR034216 C5a peptidase-like domain M28_RS08725 IPR036852 Peptidase S8/S53 domain superfamily M28_RS08735 IPR019950 M protein-type anchor domain M28_RS08735 IPR003345 M protein repeat M28_RS08735 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS08735 IPR019931 LPXTG cell wall anchor domain M28_RS08735 IPR005877 YSIRK Gram-positive signal peptide M28_RS08740 IPR019931 LPXTG cell wall anchor domain M28_RS08740 IPR019948 Gram-positive LPXTG cell wall anchor M28_RS08740 IPR005877 YSIRK Gram-positive signal peptide M28_RS08740 IPR019950 M protein-type anchor domain M28_RS08745 IPR007737 Mga helix-turn-helix domain M28_RS08745 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08745 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain M28_RS08745 IPR013236 M protein trans-acting positive regulator (MGA), PRD domain M28_RS08760 IPR007921 CHAP domain M28_RS08760 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain M28_RS08760 IPR038765 Papain-like cysteine peptidase superfamily M28_RS08765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M28_RS08765 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal M28_RS08765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M28_RS08765 IPR038318 KdpD, transmembrane domain superfamily M28_RS08765 IPR025201 Sensor protein KdpD, transmembrane domain M28_RS08765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M28_RS08765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS08765 IPR003594 Histidine kinase/HSP90-like ATPase M28_RS08765 IPR029016 GAF-like domain superfamily M28_RS08765 IPR005467 Histidine kinase domain M28_RS08770 IPR001789 Signal transduction response regulator, receiver domain M28_RS08770 IPR001867 OmpR/PhoB-type DNA-binding domain M28_RS08770 IPR011006 CheY-like superfamily M28_RS08770 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08770 IPR039420 Transcriptional regulatory protein WalR-like M28_RS08775 IPR025857 MacB-like periplasmic core domain M28_RS08775 IPR003838 ABC transporter permease protein domain M28_RS08780 IPR003439 ABC transporter-like M28_RS08780 IPR003593 AAA+ ATPase domain M28_RS08780 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08780 IPR017871 ABC transporter, conserved site M28_RS08815 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M28_RS08815 IPR023059 Foldase protein PrsA M28_RS08815 IPR027304 Trigger factor/SurA domain superfamily M28_RS08830 IPR038765 Papain-like cysteine peptidase superfamily M28_RS08830 IPR025896 Spi protease inhibitor M28_RS08830 IPR000200 Peptidase C10, streptopain M28_RS08850 IPR001604 DNA/RNA non-specific endonuclease M28_RS08855 IPR036681 PgpA-like superfamily M28_RS08855 IPR007686 YutG/PgpA domain M28_RS08855 IPR026038 Putative phosphatidylglycerophosphatase M28_RS08860 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M28_RS08860 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M28_RS08860 IPR016205 Glycerol dehydrogenase M28_RS08865 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial M28_RS08865 IPR018225 Transaldolase, active site M28_RS08865 IPR001585 Transaldolase/Fructose-6-phosphate aldolase M28_RS08865 IPR023001 Fructose-6-phosphate aldolase M28_RS08865 IPR013785 Aldolase-type TIM barrel M28_RS08870 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M28_RS08870 IPR004184 Pyruvate formate lyase domain M28_RS08870 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family M28_RS08870 IPR001150 Glycine radical domain M28_RS08875 IPR003352 Phosphotransferase system, EIIC M28_RS08875 IPR004796 Phosphotransferase system, cellobiose-type IIC component M28_RS08875 IPR004501 Phosphotransferase system, EIIC component, type 3 M28_RS08880 IPR036095 PTS system IIB component-like superfamily M28_RS08880 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M28_RS08880 IPR013012 Phosphotransferase system, EIIB component, type 3 M28_RS08885 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily M28_RS08885 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit M28_RS08890 IPR013324 RNA polymerase sigma factor, region 3/4-like M28_RS08890 IPR007324 Sugar-binding domain, putative M28_RS08890 IPR037171 NagB/RpiA transferase-like M28_RS08895 IPR036390 Winged helix DNA-binding domain superfamily M28_RS08895 IPR037171 NagB/RpiA transferase-like M28_RS08895 IPR001034 DeoR-type HTH domain M28_RS08895 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M28_RS08895 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS08895 IPR014036 DeoR C-terminal sensor domain M28_RS08900 IPR012839 Organic radical enzyme activase M28_RS08900 IPR034457 Organic radical-activating enzymes M28_RS08900 IPR001989 Radical-activating enzyme, conserved site M28_RS08900 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M28_RS08900 IPR013785 Aldolase-type TIM barrel M28_RS08900 IPR040074 BssD/PflA/YjjW M28_RS08900 IPR007197 Radical SAM M28_RS08915 IPR038584 Ribosomal protein L33 superfamily M28_RS08915 IPR011332 Zinc-binding ribosomal protein M28_RS08915 IPR001705 Ribosomal protein L33 M28_RS08920 IPR012338 Beta-lactamase/transpeptidase-like M28_RS08920 IPR001460 Penicillin-binding protein, transpeptidase M28_RS08920 IPR036950 Penicillin binding protein transglycosylase domain M28_RS08920 IPR023346 Lysozyme-like domain superfamily M28_RS08920 IPR001264 Glycosyl transferase, family 51 M28_RS08935 IPR020103 Pseudouridine synthase, catalytic domain superfamily M28_RS08935 IPR006225 Pseudouridine synthase, RluC/RluD M28_RS08935 IPR006145 Pseudouridine synthase, RsuA/RluA M28_RS08935 IPR002942 RNA-binding S4 domain M28_RS08935 IPR036986 RNA-binding S4 domain superfamily M28_RS08935 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M28_RS08945 IPR005322 Peptidase C69, dipeptidase A M28_RS08960 IPR027409 GroEL-like apical domain superfamily M28_RS08960 IPR027413 GroEL-like equatorial domain superfamily M28_RS08960 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M28_RS08960 IPR001844 Chaperonin Cpn60 M28_RS08960 IPR018370 Chaperonin Cpn60, conserved site M28_RS08960 IPR002423 Chaperonin Cpn60/TCP-1 family M28_RS08965 IPR020818 GroES chaperonin family M28_RS08965 IPR037124 GroES chaperonin superfamily M28_RS08965 IPR018369 Chaperonin GroES, conserved site M28_RS08965 IPR011032 GroES-like superfamily M28_RS08970 IPR003593 AAA+ ATPase domain M28_RS08970 IPR003959 ATPase, AAA-type, core M28_RS08970 IPR019489 Clp ATPase, C-terminal M28_RS08970 IPR036628 Clp, N-terminal domain superfamily M28_RS08970 IPR004176 Clp, N-terminal M28_RS08970 IPR001270 ClpA/B family M28_RS08970 IPR018368 ClpA/B, conserved site 1 M28_RS08970 IPR028299 ClpA/B, conserved site 2 M28_RS08970 IPR001943 UVR domain M28_RS08970 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS08970 IPR041546 ClpA/ClpB, AAA lid domain M28_RS08975 IPR008463 Transcriptional regulator CtsR M28_RS08975 IPR041473 CtsR, C-terminal dimerization domain M28_RS08975 IPR041902 CtsR, N-terminal domain superfamily M28_RS08975 IPR040465 CtsR, N-terminal HTH domain M28_RS08975 IPR041908 CtsR, C-terminal domain superfamily M28_RS08980 IPR012340 Nucleic acid-binding, OB-fold M28_RS08980 IPR019844 Cold-shock (CSD) domain M28_RS08980 IPR012156 Cold shock, CspA M28_RS08980 IPR011129 Cold shock domain M28_RS08980 IPR002059 Cold-shock protein, DNA-binding M28_RS08990 IPR017559 Alkyl hydroperoxide reductase subunit C M28_RS08990 IPR013766 Thioredoxin domain M28_RS08990 IPR024706 Peroxiredoxin, AhpC-type M28_RS08990 IPR036249 Thioredoxin-like superfamily M28_RS08990 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M28_RS08995 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS08995 IPR023753 FAD/NAD(P)-binding domain M28_RS08995 IPR002109 Glutaredoxin M28_RS08995 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site M28_RS08995 IPR036249 Thioredoxin-like superfamily M28_RS08995 IPR012081 Alkyl hydroperoxide reductase subunit F M28_RS08995 IPR012336 Thioredoxin-like fold M28_RS09000 IPR006680 Amidohydrolase-related M28_RS09000 IPR032466 Metal-dependent hydrolase M28_RS09000 IPR005920 Imidazolonepropionase M28_RS09000 IPR011059 Metal-dependent hydrolase, composite domain superfamily M28_RS09005 IPR023637 Urocanase M28_RS09005 IPR038364 Urocanase, central domain superfamily M28_RS09005 IPR023636 Urocanase conserved site M28_RS09005 IPR035400 Urocanase, N-terminal domain M28_RS09005 IPR035085 Urocanase, Rossmann-like domain M28_RS09005 IPR035401 Urocanase, C-terminal domain M28_RS09005 IPR036190 Urocanase superfamily M28_RS09010 IPR022384 Formiminotransferase catalytic domain superfamily M28_RS09010 IPR037064 Formiminotransferase, N-terminal subdomain superfamily M28_RS09010 IPR012886 Formiminotransferase, N-terminal subdomain M28_RS09010 IPR004227 Formiminotransferase catalytic domain M28_RS09010 IPR037070 Formiminotransferase, C-terminal subdomain superfamily M28_RS09010 IPR013802 Formiminotransferase, C-terminal subdomain M28_RS09015 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily M28_RS09015 IPR007044 Cyclodeaminase/cyclohydrolase M28_RS09020 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09020 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site M28_RS09020 IPR000559 Formate-tetrahydrofolate ligase, FTHFS M28_RS09030 IPR002293 Amino acid/polyamine transporter I M28_RS09035 IPR024083 Fumarase/histidase, N-terminal M28_RS09035 IPR022313 Phenylalanine/histidine ammonia-lyases, active site M28_RS09035 IPR001106 Aromatic amino acid lyase M28_RS09035 IPR008948 L-Aspartase-like M28_RS09035 IPR005921 Histidine ammonia-lyase M28_RS09040 IPR023696 Ureohydrolase domain superfamily M28_RS09040 IPR006035 Ureohydrolase M28_RS09040 IPR005923 Formiminoglutamase M28_RS09050 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid M28_RS09050 IPR001865 Ribosomal protein S2 M28_RS09050 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily M28_RS09050 IPR018130 Ribosomal protein S2, conserved site M28_RS09055 IPR001816 Translation elongation factor EFTs/EF1B M28_RS09055 IPR036402 Elongation factor Ts, dimerisation domain superfamily M28_RS09055 IPR018101 Translation elongation factor Ts, conserved site M28_RS09055 IPR009060 UBA-like superfamily M28_RS09055 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation M28_RS09060 IPR008753 Peptidase M13, N-terminal domain M28_RS09060 IPR018497 Peptidase M13, C-terminal domain M28_RS09060 IPR000718 Peptidase M13 M28_RS09060 IPR024079 Metallopeptidase, catalytic domain superfamily M28_RS09060 IPR042089 Peptidase M13, domain 2 M28_RS09065 IPR012769 Trehalose-6-phosphate hydrolase M28_RS09065 IPR017853 Glycoside hydrolase superfamily M28_RS09065 IPR032091 Maltogenic Amylase, C-terminal M28_RS09065 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M28_RS09065 IPR013780 Glycosyl hydrolase, all-beta M28_RS09070 IPR003352 Phosphotransferase system, EIIC M28_RS09070 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M28_RS09070 IPR011296 Phosphotransferase system, trehalose-specific IIBC component M28_RS09070 IPR001996 Phosphotransferase system, IIB component, type 1 M28_RS09070 IPR013013 Phosphotransferase system, EIIC component, type 1 M28_RS09070 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M28_RS09070 IPR036878 Glucose permease domain IIB M28_RS09075 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M28_RS09075 IPR012770 Trehalose operon transcriptional repressor M28_RS09075 IPR000524 Transcription regulator HTH, GntR M28_RS09075 IPR011663 UbiC transcription regulator-associated M28_RS09075 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS09075 IPR036390 Winged helix DNA-binding domain superfamily M28_RS09090 IPR037523 Vicinal oxygen chelate (VOC) domain M28_RS09090 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M28_RS09090 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II M28_RS09090 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M28_RS09095 IPR005583 Peroxide stress protein YaaA M28_RS09100 IPR013785 Aldolase-type TIM barrel M28_RS09100 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic M28_RS09100 IPR034457 Organic radical-activating enzymes M28_RS09100 IPR001989 Radical-activating enzyme, conserved site M28_RS09100 IPR007197 Radical SAM M28_RS09110 IPR036291 NAD(P)-binding domain superfamily M28_RS09110 IPR000683 Oxidoreductase, N-terminal M28_RS09115 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M28_RS09115 IPR005144 ATP-cone domain M28_RS09115 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic M28_RS09115 IPR001150 Glycine radical domain M28_RS09125 IPR009711 Uncharacterised protein family UPF0473 M28_RS09130 IPR006641 YqgF/RNase H-like domain M28_RS09130 IPR005227 Putative pre-16S rRNA nuclease M28_RS09130 IPR012337 Ribonuclease H-like superfamily M28_RS09130 IPR037027 YqgF/RNase H-like domain superfamily M28_RS09135 IPR009309 IreB regulatory phosphoprotein M28_RS09140 IPR006660 Arsenate reductase-like M28_RS09140 IPR006504 Transcriptional regulator Spx/MgsR M28_RS09140 IPR036249 Thioredoxin-like superfamily M28_RS09145 IPR023400 DNA recombination and repair protein RecA, C-terminal M28_RS09145 IPR003593 AAA+ ATPase domain M28_RS09145 IPR013765 DNA recombination and repair protein RecA M28_RS09145 IPR020584 DNA recombination/repair protein RecA, conserved site M28_RS09145 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09145 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M28_RS09145 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface M28_RS09150 IPR001453 MoaB/Mog domain M28_RS09150 IPR036425 MoaB/Mog-like domain superfamily M28_RS09150 IPR008135 Competence-induced protein CinA M28_RS09150 IPR041424 CinA, KH domain M28_RS09150 IPR008136 CinA, C-terminal M28_RS09150 IPR036653 CinA-like, C-terminal M28_RS09155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS09155 IPR000182 GNAT domain M28_RS09155 IPR025777 GMP synthetase ATP pyrophosphatase domain M28_RS09155 IPR001674 GMP synthase, C-terminal M28_RS09155 IPR017926 Glutamine amidotransferase M28_RS09155 IPR011257 DNA glycosylase M28_RS09155 IPR029062 Class I glutamine amidotransferase-like M28_RS09155 IPR005019 Methyladenine glycosylase M28_RS09155 IPR016181 Acyl-CoA N-acyltransferase M28_RS09160 IPR011114 Holliday junction DNA helicase RuvA, C-terminal M28_RS09160 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial M28_RS09160 IPR012340 Nucleic acid-binding, OB-fold M28_RS09160 IPR000085 Bacterial DNA recombination protein RuvA M28_RS09160 IPR036267 RuvA, C-terminal domain superfamily M28_RS09160 IPR010994 RuvA domain 2-like M28_RS09160 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M28_RS09170 IPR002099 DNA mismatch repair protein family, N-terminal M28_RS09170 IPR042121 MutL, C-terminal domain, regulatory subdomain M28_RS09170 IPR037198 MutL, C-terminal domain superfamily M28_RS09170 IPR020667 DNA mismatch repair protein, MutL M28_RS09170 IPR020568 Ribosomal protein S5 domain 2-type fold M28_RS09170 IPR014790 MutL, C-terminal, dimerisation M28_RS09170 IPR013507 DNA mismatch repair protein, S5 domain 2-like M28_RS09170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M28_RS09170 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms M28_RS09170 IPR014762 DNA mismatch repair, conserved site M28_RS09170 IPR042120 MutL, C-terminal domain, dimerisation subdomain M28_RS09170 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M28_RS09175 IPR002104 Integrase, catalytic domain M28_RS09175 IPR013762 Integrase-like, catalytic domain superfamily M28_RS09175 IPR011010 DNA breaking-rejoining enzyme, catalytic core M28_RS09175 IPR010998 Integrase/recombinase, N-terminal M28_RS09175 IPR004107 Integrase, SAM-like, N-terminal M28_RS09290 IPR000432 DNA mismatch repair protein MutS, C-terminal M28_RS09290 IPR036187 DNA mismatch repair protein MutS, core domain superfamily M28_RS09290 IPR036678 MutS, connector domain superfamily M28_RS09290 IPR016151 DNA mismatch repair protein MutS, N-terminal M28_RS09290 IPR017261 DNA mismatch repair protein MutS/MSH M28_RS09290 IPR007695 DNA mismatch repair protein MutS-like, N-terminal M28_RS09290 IPR005748 DNA mismatch repair protein MutS M28_RS09290 IPR007861 DNA mismatch repair protein MutS, clamp M28_RS09290 IPR007696 DNA mismatch repair protein MutS, core M28_RS09290 IPR007860 DNA mismatch repair protein MutS, connector domain M28_RS09290 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09300 IPR036251 Arginine repressor, C-terminal domain superfamily M28_RS09300 IPR036390 Winged helix DNA-binding domain superfamily M28_RS09300 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS09300 IPR020900 Arginine repressor, DNA-binding domain M28_RS09300 IPR001669 Arginine repressor M28_RS09300 IPR020899 Arginine repressor, C-terminal M28_RS09305 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M28_RS09305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS09305 IPR008909 DALR anticodon binding M28_RS09305 IPR001278 Arginine-tRNA ligase M28_RS09305 IPR035684 Arginyl-tRNA synthetase, catalytic core domain M28_RS09305 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily M28_RS09305 IPR005148 Arginyl tRNA synthetase N-terminal domain M28_RS09315 IPR003740 Uncharacterised membrane protein YitT M28_RS09315 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M28_RS09315 IPR019264 Domain of unknown function DUF2179 M28_RS09320 IPR019264 Domain of unknown function DUF2179 M28_RS09320 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M28_RS09320 IPR003740 Uncharacterised membrane protein YitT M28_RS09325 IPR019264 Domain of unknown function DUF2179 M28_RS09325 IPR003740 Uncharacterised membrane protein YitT M28_RS09325 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M28_RS09330 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M28_RS09330 IPR012340 Nucleic acid-binding, OB-fold M28_RS09330 IPR029351 GAD domain M28_RS09330 IPR004115 GAD-like domain superfamily M28_RS09330 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M28_RS09330 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb M28_RS09330 IPR004524 Aspartate-tRNA ligase, type 1 M28_RS09330 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS09335 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain M28_RS09335 IPR033656 Histidyl-anticodon-binding M28_RS09335 IPR015807 Histidine-tRNA ligase M28_RS09335 IPR004154 Anticodon-binding M28_RS09335 IPR036621 Anticodon-binding domain superfamily M28_RS09335 IPR006195 Aminoacyl-tRNA synthetase, class II M28_RS09335 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit M28_RS09340 IPR011332 Zinc-binding ribosomal protein M28_RS09340 IPR002677 Ribosomal protein L32p M28_RS09345 IPR011332 Zinc-binding ribosomal protein M28_RS09345 IPR018264 Ribosomal protein L33, conserved site M28_RS09345 IPR001705 Ribosomal protein L33 M28_RS09345 IPR038584 Ribosomal protein L33 superfamily M28_RS09360 IPR018334 ArsR-type transcription regulator, HTH motif M28_RS09360 IPR001845 HTH ArsR-type DNA-binding domain M28_RS09360 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS09360 IPR036390 Winged helix DNA-binding domain superfamily M28_RS09360 IPR011991 ArsR-like helix-turn-helix domain M28_RS09390 IPR003561 Mutator MutT M28_RS09390 IPR020476 NUDIX hydrolase M28_RS09390 IPR015797 NUDIX hydrolase-like domain superfamily M28_RS09390 IPR020084 NUDIX hydrolase, conserved site M28_RS09390 IPR000086 NUDIX hydrolase domain M28_RS09395 IPR036390 Winged helix DNA-binding domain superfamily M28_RS09395 IPR036388 Winged helix-like DNA-binding domain superfamily M28_RS09395 IPR005149 Transcription regulator PadR, N-terminal M28_RS09410 IPR017501 Phage infection protein, YhgE, C-terminal M28_RS09410 IPR023908 xxxLxxG heptad repeat M28_RS09410 IPR017500 Phage infection protein, YhgE, N-terminal M28_RS09530 IPR004107 Integrase, SAM-like, N-terminal M28_RS09530 IPR011010 DNA breaking-rejoining enzyme, catalytic core M28_RS09530 IPR010998 Integrase/recombinase, N-terminal M28_RS09530 IPR013762 Integrase-like, catalytic domain superfamily M28_RS09530 IPR002104 Integrase, catalytic domain M28_RS09535 IPR022801 Ribosomal protein S4/S9 M28_RS09535 IPR001912 Ribosomal protein S4/S9, N-terminal M28_RS09535 IPR005709 Ribosomal protein S4, bacterial-type M28_RS09535 IPR018079 Ribosomal protein S4, conserved site M28_RS09535 IPR002942 RNA-binding S4 domain M28_RS09535 IPR036986 RNA-binding S4 domain superfamily M28_RS09545 IPR003593 AAA+ ATPase domain M28_RS09545 IPR007694 DNA helicase, DnaB-like, C-terminal M28_RS09545 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M28_RS09545 IPR007693 DNA helicase, DnaB-like, N-terminal M28_RS09545 IPR007692 DNA helicase, DnaB type M28_RS09545 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily M28_RS09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09550 IPR009027 Ribosomal protein L9/RNase H1, N-terminal M28_RS09550 IPR020594 Ribosomal protein L9, bacteria/chloroplast M28_RS09550 IPR020069 Ribosomal protein L9, C-terminal M28_RS09550 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M28_RS09550 IPR036935 Ribosomal protein L9, N-terminal domain superfamily M28_RS09550 IPR000244 Ribosomal protein L9 M28_RS09550 IPR020070 Ribosomal protein L9, N-terminal M28_RS09555 IPR000160 GGDEF domain M28_RS09555 IPR003156 DHHA1 domain M28_RS09555 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA M28_RS09555 IPR001667 DDH domain M28_RS09555 IPR038763 DHH phosphoesterase superfamily M28_RS09560 IPR020595 MnmG-related, conserved site M28_RS09560 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related M28_RS09560 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG M28_RS09560 IPR026904 GidA associated domain 3 M28_RS09560 IPR036188 FAD/NAD(P)-binding domain superfamily M28_RS09570 IPR004506 tRNA-specific 2-thiouridylase M28_RS09570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS09570 IPR023382 Adenine nucleotide alpha hydrolase-like domains M28_RS09575 IPR002912 ACT domain M28_RS09575 IPR029009 Allosteric substrate binding domain superfamily M28_RS09575 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit M28_RS09575 IPR005131 Serine dehydratase beta chain M28_RS09580 IPR004642 Serine dehydratase, alpha subunit M28_RS09580 IPR005130 Serine dehydratase-like, alpha subunit M28_RS09585 IPR010618 Transglycosylase-like M28_RS09585 IPR023346 Lysozyme-like domain superfamily M28_RS09590 IPR003339 ABC/ECF transporter, transmembrane component M28_RS09590 IPR024919 ECF transporter transmembrane protein EcfT M28_RS09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09595 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 M28_RS09595 IPR015856 ABC transporter, CbiO/EcfA subunit M28_RS09595 IPR017871 ABC transporter, conserved site M28_RS09595 IPR003439 ABC transporter-like M28_RS09595 IPR003593 AAA+ ATPase domain M28_RS09600 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09600 IPR003593 AAA+ ATPase domain M28_RS09600 IPR003439 ABC transporter-like M28_RS09600 IPR017871 ABC transporter, conserved site M28_RS09600 IPR015856 ABC transporter, CbiO/EcfA subunit M28_RS09600 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 M28_RS09605 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase M28_RS09605 IPR000462 CDP-alcohol phosphatidyltransferase M28_RS09615 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M28_RS09615 IPR011765 Peptidase M16, N-terminal M28_RS09615 IPR007863 Peptidase M16, C-terminal M28_RS09630 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type M28_RS09630 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal M28_RS09630 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation M28_RS09630 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily M28_RS09630 IPR017476 UDP-glucose/GDP-mannose dehydrogenase M28_RS09630 IPR036291 NAD(P)-binding domain superfamily M28_RS09630 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M28_RS09630 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal M28_RS09635 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type M28_RS09635 IPR005835 Nucleotidyl transferase domain M28_RS09635 IPR029044 Nucleotide-diphospho-sugar transferases M28_RS09645 IPR003395 RecF/RecN/SMC, N-terminal M28_RS09645 IPR042174 DNA-binding RecF, domain 2 M28_RS09645 IPR001238 DNA-binding, RecF M28_RS09645 IPR018078 DNA-binding, RecF, conserved site M28_RS09645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09650 IPR010651 Sugar transport protein M28_RS09655 IPR005990 Inosine-5'-monophosphate dehydrogenase M28_RS09655 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M28_RS09655 IPR000644 CBS domain M28_RS09655 IPR013785 Aldolase-type TIM barrel M28_RS09655 IPR001093 IMP dehydrogenase/GMP reductase M28_RS09660 IPR024109 Tryptophan-tRNA ligase, bacterial-type M28_RS09660 IPR002305 Aminoacyl-tRNA synthetase, class Ic M28_RS09660 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M28_RS09660 IPR002306 Tryptophan-tRNA ligase M28_RS09660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M28_RS09665 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M28_RS09665 IPR003740 Uncharacterised membrane protein YitT M28_RS09665 IPR019264 Domain of unknown function DUF2179 M28_RS09670 IPR003593 AAA+ ATPase domain M28_RS09670 IPR032781 ABC-transporter extension domain M28_RS09670 IPR003439 ABC transporter-like M28_RS09670 IPR027417 P-loop containing nucleoside triphosphate hydrolase M28_RS09700 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M28_RS09700 IPR003742 RNA methyltransferase RlmH M28_RS09700 IPR029028 Alpha/beta knot methyltransferases M28_RS09705 IPR001940 Peptidase S1C M28_RS09705 IPR001478 PDZ domain M28_RS09705 IPR036034 PDZ superfamily M28_RS09705 IPR009003 Peptidase S1, PA clan M28_RS09710 IPR041468 ParB/Spo0J, HTH domain M28_RS09710 IPR036086 ParB/Sulfiredoxin superfamily M28_RS09710 IPR004437 ParB/RepB/Spo0J partition protein M28_RS09710 IPR003115 ParB/Sulfiredoxin