locus-tag	class	description
SD89_RS00005	COG1475	DNA binding
SD89_RS00015	COG0592	DNA-directed DNA polymerase activity
SD89_RS00025	COG0012	GTP binding
SD89_RS00035	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SD89_RS00040	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SD89_RS00065	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SD89_RS00070	COG0531	amino acid
SD89_RS00245	COG3942	CHAP domain
SD89_RS00265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SD89_RS00275	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SD89_RS00290	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SD89_RS00310	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SD89_RS00325	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SD89_RS00340	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SD89_RS00355	COG1454	alcohol dehydrogenase
SD89_RS00355	COG1012	belongs to the aldehyde dehydrogenase family
SD89_RS00360	COG1064	alcohol dehydrogenase
SD89_RS00365	COG0534	Mate efflux family protein
SD89_RS00475	COG0201	protein transport
SD89_RS00610	COG1121	(ABC) transporter
SD89_RS00615	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SD89_RS00630	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD89_RS00650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SD89_RS00655	COG1459	type II secretion system
SD89_RS00660	COG4537	Required for transformation and DNA binding
SD89_RS00700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SD89_RS00705	COG1363	Peptidase, m42
SD89_RS00715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD89_RS00720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SD89_RS00730	COG1428	Deoxynucleoside kinase
SD89_RS00735	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SD89_RS00780	COG4509	Sortase family
SD89_RS00805	COG2031	fatty acid transporter
SD89_RS00820	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SD89_RS00835	COG0251	oxidation-reduction process
SD89_RS00850	COG1269	ATP hydrolysis coupled proton transport
SD89_RS00855	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SD89_RS00865	COG1527	subunit (C
SD89_RS00870	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
SD89_RS00905	COG1744	ABC transporter substrate-binding protein PnrA-like
SD89_RS00945	COG0626	cystathionine gamma-synthase activity
SD89_RS00975	COG3623	hexulose-6-phosphate isomerase
SD89_RS00995	COG4175	Glycine betaine
SD89_RS00995	COG3448	diguanylate cyclase activity
SD89_RS01005	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD89_RS01005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD89_RS01025	COG3969	phosphoadenosine phosphosulfate
SD89_RS01030	COG1475	DNA binding
SD89_RS01040	COG2801	Transposase and inactivated derivatives
SD89_RS01045	COG2801	Transposase and inactivated derivatives
SD89_RS01060	COG0157	Belongs to the NadC ModD family
SD89_RS01065	COG2801	Transposase and inactivated derivatives
SD89_RS01085	COG1268	BioY protein
SD89_RS01090	COG1234	tRNA 3'-trailer cleavage
SD89_RS01120	COG5433	transposase activity
SD89_RS01130	COG0457	Tetratricopeptide repeat
SD89_RS01130	COG0705	Rhomboid family
SD89_RS01150	COG1132	(ABC) transporter
SD89_RS01155	COG1132	(ABC) transporter
SD89_RS01165	COG0756	dUTP diphosphatase activity
SD89_RS01190	COG3290	protein histidine kinase activity
SD89_RS01215	COG1847	R3H domain protein
SD89_RS01235	COG1175	transmembrane transport
SD89_RS01240	COG0395	ABC-type sugar transport system, permease component
SD89_RS01255	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SD89_RS01270	COG0084	hydrolase, TatD family'
SD89_RS01295	COG1564	THIamine pyrophosphokinase
SD89_RS01310	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SD89_RS01345	COG0765	amino acid transport
SD89_RS01365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SD89_RS01375	COG0719	Fe-S assembly protein
SD89_RS01380	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SD89_RS01395	COG1686	Belongs to the peptidase S11 family
SD89_RS01400	COG1686	Belongs to the peptidase S11 family
SD89_RS01405	COG4166	transmembrane transport
SD89_RS01410	COG0601	transmembrane transport
SD89_RS01415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SD89_RS01420	COG0444	Belongs to the ABC transporter superfamily
SD89_RS01475	COG0351	phosphomethylpyrimidine kinase
SD89_RS01480	COG4720	Psort location CytoplasmicMembrane, score
SD89_RS01490	COG0668	transmembrane transport
SD89_RS01545	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SD89_RS01560	COG0789	Transcriptional regulator
SD89_RS01565	COG0174	glutamine synthetase
SD89_RS01580	COG1214	PFAM Peptidase M22, glycoprotease
SD89_RS01585	COG0456	acetyltransferase
SD89_RS01605	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SD89_RS01610	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD89_RS01620	COG2081	HI0933 family
SD89_RS01635	COG0577	efflux transmembrane transporter activity
SD89_RS01635	COG1136	(ABC) transporter
SD89_RS01655	COG0789	Transcriptional regulator
SD89_RS01680	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SD89_RS01685	COG2814	Major facilitator Superfamily
SD89_RS01690	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SD89_RS01705	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SD89_RS01710	COG1882	Formate acetyltransferase
SD89_RS01725	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SD89_RS01730	COG0681	Belongs to the peptidase S26 family
SD89_RS01760	COG3118	belongs to the thioredoxin family
SD89_RS01770	COG1194	a g-specific adenine glycosylase
SD89_RS01810	COG0006	proline dipeptidase activity
SD89_RS01815	COG2131	deaminase
SD89_RS01835	COG1609	Transcriptional regulator
SD89_RS01840	COG1621	beta-fructofuranosidase activity
SD89_RS01845	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD89_RS01845	COG2190	(PTS) system
SD89_RS01845	COG1263	PTS System
SD89_RS01855	COG1940	carbohydrate kinase activity
SD89_RS01860	COG1482	cell wall glycoprotein biosynthetic process
SD89_RS01865	COG5433	transposase activity
SD89_RS01890	COG3942	CHAP domain
SD89_RS01890	COG1388	LysM domain
SD89_RS01915	COG1120	ATPase activity
SD89_RS01920	COG4988	ABC transporter
SD89_RS01925	COG1132	(ABC) transporter
SD89_RS01940	COG1129	ABC transporter
SD89_RS01945	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SD89_RS01960	COG0252	asparaginase activity
SD89_RS01965	COG0561	phosphatase activity
SD89_RS01975	COG0436	Aminotransferase
SD89_RS01985	COG1335	isochorismatase
SD89_RS02015	COG2261	transglycosylase associated protein
SD89_RS02020	COG0588	phosphoglycerate mutase activity
SD89_RS02055	COG1024	Enoyl-CoA hydratase
SD89_RS02080	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SD89_RS02085	COG1028	Short-chain dehydrogenase reductase Sdr
SD89_RS02090	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SD89_RS02105	COG0439	Biotin carboxylase
SD89_RS02130	COG3716	PTS system mannose fructose sorbose family IID component
SD89_RS02135	COG3715	PTS system
SD89_RS02145	COG0561	phosphatase activity
SD89_RS02150	COG2252	PERMEase
SD89_RS02155	COG0802	atpase or kinase
SD89_RS02165	COG1316	TRANSCRIPTIONal
SD89_RS02175	COG0537	adenosine 5'-monophosphoramidase activity
SD89_RS02180	COG1131	(ABC) transporter
SD89_RS02185	COG4473	ABC transporter
SD89_RS02210	COG0195	Participates in both transcription termination and antitermination
SD89_RS02215	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SD89_RS02250	COG2217	Heavy metal translocating P-type atpase
SD89_RS02300	COG2860	membrane
SD89_RS02305	COG0561	phosphatase activity
SD89_RS02325	COG1283	sodium-dependent phosphate transmembrane transporter activity
SD89_RS02335	COG0656	L-ascorbic acid biosynthetic process
SD89_RS02340	COG1755	Isoprenylcysteine carboxyl methyltransferase
SD89_RS02375	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SD89_RS02380	COG0446	pyridine nucleotide-disulphide oxidoreductase
SD89_RS02405	COG1131	(ABC) transporter
SD89_RS02440	COG0768	penicillin binding
SD89_RS02450	COG0513	Belongs to the DEAD box helicase family
SD89_RS02455	COG0765	amino acid transport
SD89_RS02460	COG1126	abc transporter atp-binding protein
SD89_RS02470	COG0492	ferredoxin-NADP+ reductase activity
SD89_RS02475	COG1113	amino acid transport
SD89_RS02480	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SD89_RS02490	COG3579	cysteine-type endopeptidase activity
SD89_RS02495	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD89_RS02520	COG0116	Belongs to the methyltransferase superfamily
SD89_RS02535	COG2610	gluconate transmembrane transporter activity
SD89_RS02540	COG1028	Short-chain dehydrogenase reductase Sdr
SD89_RS02550	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SD89_RS02555	COG0183	Belongs to the thiolase family
SD89_RS02560	COG0583	DNA-binding transcription factor activity
SD89_RS02580	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SD89_RS02590	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SD89_RS02590	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SD89_RS02600	COG0515	serine threonine protein kinase
SD89_RS02600	COG2815	serine threonine protein kinase
SD89_RS02610	COG4585	Histidine kinase
SD89_RS02615	COG2197	response regulator
SD89_RS02625	COG1185	polyribonucleotide nucleotidyltransferase activity
SD89_RS02635	COG1739	Uncharacterized protein family UPF0029
SD89_RS02640	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SD89_RS02730	COG0383	alpha-mannosidase activity
SD89_RS02745	COG3525	Glycosyl hydrolase, family 20, catalytic domain
SD89_RS02750	COG2723	6-phospho-beta-galactosidase activity
SD89_RS02755	COG1940	carbohydrate kinase activity
SD89_RS02760	COG1175	transmembrane transport
SD89_RS02765	COG0395	ABC-type sugar transport system, permease component
SD89_RS02770	COG1653	transport
SD89_RS02780	COG2972	Histidine kinase
SD89_RS02785	COG2207	Transcriptional regulator
SD89_RS02785	COG4753	response regulator
SD89_RS02790	COG3250	beta-galactosidase activity
SD89_RS02800	COG2226	methyltransferase
SD89_RS02820	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SD89_RS02820	COG1605	Chorismate mutase
SD89_RS02830	COG5433	transposase activity
SD89_RS02910	COG1131	(ABC) transporter
SD89_RS02930	COG4708	membrane
SD89_RS02940	COG1597	lipid kinase activity
SD89_RS03025	COG0577	efflux transmembrane transporter activity
SD89_RS03035	COG2321	neutral zinc metallopeptidase
SD89_RS03050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD89_RS03060	COG1970	mechanosensitive ion channel activity
SD89_RS03065	COG0358	DNA primase activity
SD89_RS03070	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SD89_RS03075	COG2151	metal-sulfur cluster biosynthetic enzyme
SD89_RS03120	COG1216	Glycosyl transferase, family 2
SD89_RS03175	COG1368	sulfuric ester hydrolase activity
SD89_RS03180	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SD89_RS03200	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SD89_RS03205	COG0285	dihydrofolate synthase activity
SD89_RS03215	COG1104	cysteine desulfurase activity
SD89_RS03240	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SD89_RS03245	COG0583	DNA-binding transcription factor activity
SD89_RS03255	COG0564	pseudouridine synthase activity
SD89_RS03285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SD89_RS03290	COG1136	(ABC) transporter
SD89_RS03295	COG0577	efflux transmembrane transporter activity
SD89_RS03300	COG0584	glycerophosphoryl diester phosphodiesterase
SD89_RS03310	COG1837	Belongs to the UPF0109 family
SD89_RS03360	COG1349	DNA-binding transcription factor activity
SD89_RS03365	COG1105	Belongs to the carbohydrate kinase PfkB family
SD89_RS03370	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SD89_RS03370	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SD89_RS03370	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD89_RS03375	COG1388	LysM domain
SD89_RS03375	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD89_RS03380	COG1388	LysM domain
SD89_RS03380	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD89_RS03385	COG2801	Transposase and inactivated derivatives
SD89_RS03400	COG0105	UTP biosynthetic process
SD89_RS03420	COG0488	(ABC) transporter
SD89_RS03430	COG0242	peptide deformylase activity
SD89_RS03435	COG0737	Belongs to the 5'-nucleotidase family
SD89_RS03440	COG2357	RelA SpoT domain protein
SD89_RS03445	COG0745	RESPONSE REGULATOR receiver
SD89_RS03480	COG3425	synthase
SD89_RS03490	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SD89_RS03515	COG5433	transposase activity
SD89_RS03555	COG0583	DNA-binding transcription factor activity
SD89_RS03580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD89_RS03585	COG0765	amino acid transport
SD89_RS03605	COG0187	DNA topoisomerase II activity
SD89_RS03615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD89_RS03635	COG0539	negative regulation of cytoplasmic translation
SD89_RS03670	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SD89_RS03675	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
SD89_RS03685	COG0300	oxidoreductase activity
SD89_RS03690	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SD89_RS03690	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SD89_RS03705	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SD89_RS03710	COG2384	SAM-dependent methyltransferase
SD89_RS03720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD89_RS03725	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SD89_RS03735	COG1088	dTDP-glucose 4,6-dehydratase activity
SD89_RS03740	COG1051	belongs to the nudix hydrolase family
SD89_RS03745	COG0628	permease
SD89_RS03750	COG0457	Tetratricopeptide repeat
SD89_RS03755	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SD89_RS03770	COG1129	ABC transporter
SD89_RS03790	COG0488	(ABC) transporter
SD89_RS03795	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SD89_RS03800	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD89_RS03800	COG0022	dehydrogenase e1 component
SD89_RS03805	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD89_RS03820	COG5492	domain, Protein
SD89_RS03825	COG0095	Lipoate-protein ligase
SD89_RS03830	COG3442	glutamine amidotransferase
SD89_RS03835	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SD89_RS03840	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
SD89_RS03860	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SD89_RS03870	COG0647	UMP catabolic process
SD89_RS03885	COG1518	maintenance of DNA repeat elements
SD89_RS03890	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
SD89_RS03900	COG0105	UTP biosynthetic process
SD89_RS03935	COG3715	PTS system
SD89_RS03940	COG3716	PTS system mannose fructose sorbose family IID component
SD89_RS03945	COG2972	Histidine kinase
SD89_RS03950	COG2207	Transcriptional regulator
SD89_RS03950	COG4753	response regulator
SD89_RS03960	COG1012	belongs to the aldehyde dehydrogenase family
SD89_RS03975	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD89_RS04060	COG1131	(ABC) transporter
SD89_RS04075	COG1396	sequence-specific DNA binding
SD89_RS04115	COG0285	dihydrofolate synthase activity
SD89_RS04135	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SD89_RS04150	COG1176	ABC-type spermidine putrescine transport system, permease component I
SD89_RS04155	COG1177	transmembrane transport
SD89_RS04165	COG4565	transcriptional regulatory protein
SD89_RS04170	COG3290	protein histidine kinase activity
SD89_RS04175	COG3493	citrate carrier protein
SD89_RS04190	COG3700	Belongs to the class B bacterial acid phosphatase family
SD89_RS04195	COG0038	chloride channel
SD89_RS04205	COG0628	permease
SD89_RS04215	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SD89_RS04230	COG1104	cysteine desulfurase activity
SD89_RS04245	COG2357	RelA SpoT domain protein
SD89_RS04255	COG0564	pseudouridine synthase activity
SD89_RS04260	COG0280	phosphate acetyltransferase
SD89_RS04265	COG4221	oxidoreductase activity
SD89_RS04280	COG1174	glycine betaine transport
SD89_RS04295	COG2233	PERMEase
SD89_RS04320	COG2890	protein-(glutamine-N5) methyltransferase activity
SD89_RS04350	COG1132	(ABC) transporter
SD89_RS04355	COG1132	(ABC) transporter
SD89_RS04375	COG3764	Sortase (surface protein transpeptidase)
SD89_RS04380	COG0346	lactoylglutathione lyase activity
SD89_RS04395	COG1272	protein, Hemolysin III
SD89_RS04415	COG0758	DNA mediated transformation
SD89_RS04420	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SD89_RS04465	COG0511	ligase activity, forming carbon-carbon bonds
SD89_RS04470	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
SD89_RS04485	COG2851	Citrate transporter
SD89_RS04495	COG0511	ligase activity, forming carbon-carbon bonds
SD89_RS04500	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
SD89_RS04530	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
SD89_RS04550	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SD89_RS04560	COG2188	Transcriptional regulator
SD89_RS04580	COG0488	(ABC) transporter
SD89_RS04590	COG0351	phosphomethylpyrimidine kinase
SD89_RS04590	COG0352	thiamine-phosphate diphosphorylase activity
SD89_RS04595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD89_RS04600	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
SD89_RS04600	COG1328	CTP reductase activity
SD89_RS04605	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SD89_RS04635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SD89_RS04645	COG0095	Lipoate-protein ligase
SD89_RS04655	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SD89_RS04660	COG4684	Psort location CytoplasmicMembrane, score
SD89_RS04665	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SD89_RS04670	COG1079	Belongs to the binding-protein-dependent transport system permease family
SD89_RS04675	COG4603	Belongs to the binding-protein-dependent transport system permease family
SD89_RS04680	COG3845	ABC transporter
SD89_RS04685	COG1744	ABC transporter substrate-binding protein PnrA-like
SD89_RS04690	COG0295	cytidine deaminase activity
SD89_RS04695	COG2813	Specifically methylates the guanine in position
SD89_RS04710	COG5002	protein histidine kinase activity
SD89_RS04715	COG0745	RESPONSE REGULATOR receiver
SD89_RS04725	COG0704	Plays a role in the regulation of phosphate uptake
SD89_RS04740	COG0581	inorganic phosphate transmembrane transporter activity
SD89_RS04745	COG0573	inorganic phosphate transmembrane transporter activity
SD89_RS04755	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
SD89_RS04755	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SD89_RS04760	COG0483	inositol monophosphate 1-phosphatase activity
SD89_RS04775	COG0196	riboflavin kinase activity
SD89_RS04805	COG4591	ABC-type transport system involved in lipoprotein release permease component
SD89_RS04805	COG1136	(ABC) transporter
SD89_RS04855	COG1115	amino acid carrier protein
SD89_RS04860	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SD89_RS04870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD89_RS04875	COG1126	abc transporter atp-binding protein
SD89_RS04880	COG0765	amino acid transport
SD89_RS04885	COG2824	Alkylphosphonate utilization operon protein PhnA
SD89_RS04900	COG0469	pyruvate kinase activity
SD89_RS04915	COG1725	Transcriptional regulator
SD89_RS04920	COG1131	(ABC) transporter
SD89_RS04960	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD89_RS04960	COG1388	LysM domain
SD89_RS04970	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD89_RS04975	COG4824	toxin secretion phage lysis holin
SD89_RS05050	COG0740	serine-type endopeptidase activity
SD89_RS05200	COG1396	sequence-specific DNA binding
SD89_RS05235	COG0058	SHG alpha-glucan phosphorylase activity
SD89_RS05240	COG1640	4-alpha-glucanotransferase
SD89_RS05245	COG1609	Transcriptional regulator
SD89_RS05250	COG2182	Extracellular solute-binding protein
SD89_RS05255	COG1175	transmembrane transport
SD89_RS05260	COG3833	ABC-type maltose transport systems, permease component
SD89_RS05275	COG3833	ABC-type maltose transport systems, permease component
SD89_RS05280	COG1175	transmembrane transport
SD89_RS05290	COG0366	Alpha amylase catalytic
SD89_RS05295	COG2182	Extracellular solute-binding protein
SD89_RS05305	COG0657	acetylesterase activity
SD89_RS05310	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SD89_RS05320	COG1696	Membrane protein involved in D-alanine export
SD89_RS05340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD89_RS05345	COG1126	abc transporter atp-binding protein
SD89_RS05350	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD89_RS05360	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD89_RS05370	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD89_RS05370	COG3711	transcriptional antiterminator
SD89_RS05380	COG2723	6-phospho-beta-galactosidase activity
SD89_RS05385	COG5433	transposase activity
SD89_RS05410	COG2801	Transposase and inactivated derivatives
SD89_RS05415	COG1187	pseudouridine synthase activity
SD89_RS05425	COG2814	Major facilitator Superfamily
SD89_RS05485	COG3843	relaxase mobilization nuclease domain protein
SD89_RS05500	COG1674	ftsk spoiiie
SD89_RS05505	COG2946	Replication initiation factor
SD89_RS05575	COG0741	lytic transglycosylase activity
SD89_RS05575	COG0791	NLP P60 protein
SD89_RS05630	COG1131	(ABC) transporter
SD89_RS05635	COG1309	transcriptional regulator
SD89_RS05730	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
SD89_RS05750	COG0456	acetyltransferase
SD89_RS05780	COG1484	DNA-dependent DNA replication
SD89_RS05820	COG4109	DRTGG domain
SD89_RS05865	COG1028	Short-chain dehydrogenase reductase Sdr
SD89_RS05880	COG0800	Aldolase
SD89_RS05885	COG2186	Transcriptional regulator
SD89_RS05890	COG3250	beta-galactosidase activity
SD89_RS05900	COG2211	Major facilitator Superfamily
SD89_RS05920	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
SD89_RS05920	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
SD89_RS05925	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SD89_RS05930	COG1956	GAF domain-containing protein
SD89_RS05950	COG0513	Belongs to the DEAD box helicase family
SD89_RS05955	COG0726	polysaccharide deacetylase
SD89_RS05975	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SD89_RS05980	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD89_RS05985	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD89_RS06000	COG2801	Transposase and inactivated derivatives
SD89_RS06005	COG2801	Transposase and inactivated derivatives
SD89_RS06020	COG1476	TRANSCRIPTIONal
SD89_RS06035	COG4122	O-methyltransferase activity
SD89_RS06040	COG2223	nitrite transmembrane transporter activity
SD89_RS06055	COG1187	pseudouridine synthase activity
SD89_RS06100	COG2333	competence protein COMEC
SD89_RS06100	COG0658	competence protein
SD89_RS06105	COG1555	photosystem II stabilization
SD89_RS06105	COG1596	polysaccharide export
SD89_RS06110	COG0204	Acyl-transferase
SD89_RS06115	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SD89_RS06130	COG0513	Belongs to the DEAD box helicase family
SD89_RS06145	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SD89_RS06160	COG0768	penicillin binding
SD89_RS06165	COG2116	formate transmembrane transporter activity
SD89_RS06175	COG1827	regulation of RNA biosynthetic process
SD89_RS06190	COG2217	Heavy metal translocating P-type atpase
SD89_RS06210	COG1388	LysM domain
SD89_RS06210	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD89_RS06220	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD89_RS06395	COG3723	Recombinational DNA repair protein, rece pathway
SD89_RS06440	COG1396	sequence-specific DNA binding
SD89_RS06450	COG0582	viral genome integration into host DNA
SD89_RS06465	COG2755	lipolytic protein G-D-S-L family
SD89_RS06480	COG0497	DNA recombination
SD89_RS06485	COG1438	arginine binding
SD89_RS06490	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
SD89_RS06515	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SD89_RS06520	COG0415	Belongs to the DNA photolyase family
SD89_RS06530	COG0765	amino acid transport
SD89_RS06535	COG4703	Protein of unknown function (DUF1797)
SD89_RS06540	COG0542	response to heat
SD89_RS06545	COG0494	nUDIX hydrolase
SD89_RS06560	COG3599	regulation of cell shape
SD89_RS06565	COG2302	S4 RNA-binding domain
SD89_RS06580	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SD89_RS06615	COG1217	gtp-binding protein TYPA
SD89_RS06620	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD89_RS06625	COG1940	carbohydrate kinase activity
SD89_RS06635	COG0783	Belongs to the Dps family
SD89_RS06650	COG4470	Protein conserved in bacteria
SD89_RS06655	COG1609	Transcriptional regulator
SD89_RS06660	COG3480	Lon protease (S16) C-terminal proteolytic domain
SD89_RS06670	COG0742	ribosomal rna small subunit methyltransferase
SD89_RS06680	COG0549	Belongs to the carbamate kinase family
SD89_RS06685	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD89_RS06690	COG1288	antiporter activity
SD89_RS06705	COG2235	arginine
SD89_RS06730	COG2972	Histidine kinase
SD89_RS06745	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD89_RS06750	COG0785	Cytochrome C biogenesis protein
SD89_RS06760	COG0673	inositol 2-dehydrogenase activity
SD89_RS06765	COG2801	Transposase and inactivated derivatives
SD89_RS06820	COG5433	transposase activity
SD89_RS06835	COG0038	chloride channel
SD89_RS06845	COG0716	FMN binding
SD89_RS06850	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SD89_RS06860	COG2222	sugar isomerase
SD89_RS06865	COG2188	Transcriptional regulator
SD89_RS06890	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD89_RS06975	COG0740	serine-type endopeptidase activity
SD89_RS07015	COG1598	PFAM Uncharacterised protein family UPF0150
SD89_RS07075	COG3723	Recombinational DNA repair protein, rece pathway
SD89_RS07135	COG3620	sequence-specific DNA binding
SD89_RS07170	COG0436	Aminotransferase
SD89_RS07175	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SD89_RS07175	COG1199	ATP-dependent helicase activity
SD89_RS07190	COG2177	Part of the ABC transporter FtsEX involved in
SD89_RS07195	COG2884	Cell division ATP-binding protein ftsE
SD89_RS07205	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SD89_RS07215	COG0800	Aldolase
SD89_RS07230	COG1028	Short-chain dehydrogenase reductase Sdr
SD89_RS07245	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD89_RS07250	COG3715	PTS system
SD89_RS07255	COG3716	PTS system mannose fructose sorbose family IID component
SD89_RS07265	COG1609	Transcriptional regulator
SD89_RS07280	COG1078	dGTPase activity
SD89_RS07315	COG0772	Belongs to the SEDS family
SD89_RS07325	COG1164	Oligoendopeptidase f
SD89_RS07330	COG0386	Belongs to the glutathione peroxidase family
SD89_RS07375	COG4443	Transcriptional Coactivator p15 (PC4)
SD89_RS07380	COG0826	peptidase U32
SD89_RS07425	COG2183	response to ionizing radiation
SD89_RS07435	COG0701	Predicted permease
SD89_RS07440	COG3689	TIGRFAM TIGR03943 family protein
SD89_RS07450	COG2190	(PTS) system
SD89_RS07450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD89_RS07450	COG1263	PTS System
SD89_RS07455	COG3711	transcriptional antiterminator
SD89_RS07460	COG0477	Major facilitator Superfamily
SD89_RS07465	COG0552	protein localization to endoplasmic reticulum
SD89_RS07470	COG0561	phosphatase activity
SD89_RS07475	COG0561	phosphatase activity
SD89_RS07490	COG0124	histidyl-tRNA synthetase
SD89_RS07520	COG4695	Portal protein
SD89_RS07605	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SD89_RS07615	COG1196	nuclear chromosome segregation
SD89_RS07625	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SD89_RS07630	COG5002	protein histidine kinase activity
SD89_RS07635	COG0745	RESPONSE REGULATOR receiver
SD89_RS07650	COG0183	Belongs to the thiolase family
SD89_RS07670	COG4555	ABC transporter
SD89_RS07680	COG0438	transferase activity, transferring glycosyl groups
SD89_RS07690	COG1609	Transcriptional regulator
SD89_RS07695	COG0006	proline dipeptidase activity
SD89_RS07700	COG0778	Nitroreductase
SD89_RS07710	COG0463	Glycosyl transferase, family 2
SD89_RS07740	COG0557	exoribonuclease II activity
SD89_RS07750	COG2814	Major facilitator Superfamily
SD89_RS07755	COG0433	COG0433 Predicted ATPase
SD89_RS07845	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SD89_RS07855	COG1573	uracil-dna glycosylase
SD89_RS07860	COG1702	phosphate starvation-inducible protein PhoH
SD89_RS07950	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SD89_RS07960	COG0494	nUDIX hydrolase
SD89_RS07975	COG0673	inositol 2-dehydrogenase activity
SD89_RS07980	COG1028	Short-chain dehydrogenase reductase Sdr
SD89_RS08025	COG5433	transposase activity
SD89_RS08080	COG1304	FMN binding
SD89_RS08090	COG0708	Exodeoxyribonuclease III
SD89_RS08095	COG1393	Belongs to the ArsC family
SD89_RS08120	COG0470	DNA polymerase III
SD89_RS08145	COG2244	polysaccharide biosynthetic process
SD89_RS08155	COG1120	ATPase activity
SD89_RS08160	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD89_RS08165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD89_RS08170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD89_RS08185	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SD89_RS08190	COG1253	flavin adenine dinucleotide binding
SD89_RS08195	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SD89_RS08200	COG1242	4 iron, 4 sulfur cluster binding
SD89_RS08205	COG0671	phosphoesterase, PA-phosphatase related
SD89_RS08210	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SD89_RS08225	COG1187	pseudouridine synthase activity
SD89_RS08280	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SD89_RS08285	COG1254	Belongs to the acylphosphatase family
SD89_RS08300	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SD89_RS08320	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SD89_RS08330	COG1484	DNA-dependent DNA replication
SD89_RS08350	COG0745	RESPONSE REGULATOR receiver
SD89_RS08365	COG1704	LemA family
SD89_RS08375	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SD89_RS08380	COG0569	domain protein
SD89_RS08390	COG1114	Component of the transport system for branched-chain amino acids
SD89_RS08405	COG1464	Belongs to the NlpA lipoprotein family
SD89_RS08410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD89_RS08425	COG2226	methyltransferase
SD89_RS08430	COG0799	negative regulation of ribosome biogenesis
SD89_RS08435	COG1713	HD superfamily hydrolase involved in NAD metabolism
SD89_RS08445	COG1534	Rna-binding protein
SD89_RS08450	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SD89_RS08455	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
SD89_RS08495	COG1929	Belongs to the glycerate kinase type-1 family
SD89_RS08500	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
SD89_RS08525	COG0577	efflux transmembrane transporter activity
SD89_RS08530	COG1136	(ABC) transporter
SD89_RS08555	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD89_RS08555	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD89_RS08560	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD89_RS08615	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SD89_RS08620	COG1476	TRANSCRIPTIONal
SD89_RS08640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SD89_RS08650	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SD89_RS08670	COG1045	serine acetyltransferase
SD89_RS08685	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SD89_RS08700	COG3711	transcriptional antiterminator
SD89_RS08725	COG0431	NADPH-dependent FMN reductase
SD89_RS08730	COG1846	Transcriptional regulator
SD89_RS08750	COG4589	Belongs to the CDS family
SD89_RS08760	COG1862	Preprotein translocase
SD89_RS08770	COG1523	belongs to the glycosyl hydrolase 13 family
SD89_RS08780	COG3842	ATPase activity
SD89_RS08820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD89_RS08820	COG1263	PTS System
SD89_RS08820	COG2190	(PTS) system
SD89_RS08825	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SD89_RS08840	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SD89_RS08845	COG0512	Glutamine amidotransferase of anthranilate synthase
SD89_RS08850	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SD89_RS08875	COG0601	transmembrane transport
SD89_RS08905	COG0803	Belongs to the bacterial solute-binding protein 9 family
SD89_RS08915	COG1404	Belongs to the peptidase S8 family
SD89_RS08915	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SD89_RS08935	COG3711	transcriptional antiterminator
SD89_RS08945	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD89_RS08945	COG3942	CHAP domain
SD89_RS08950	COG2205	protein histidine kinase activity
SD89_RS08955	COG0745	RESPONSE REGULATOR receiver
SD89_RS08960	COG0577	efflux transmembrane transporter activity
SD89_RS08965	COG1136	(ABC) transporter
SD89_RS09030	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
SD89_RS09045	COG1882	Formate acetyltransferase
SD89_RS09050	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD89_RS09055	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD89_RS09060	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD89_RS09065	COG2390	Transcriptional regulator
SD89_RS09070	COG1349	DNA-binding transcription factor activity
SD89_RS09075	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SD89_RS09085	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD89_RS09100	COG0564	pseudouridine synthase activity
SD89_RS09130	COG0542	response to heat
SD89_RS09135	COG4463	regulation of RNA biosynthetic process
SD89_RS09150	COG0450	alkyl hydroperoxide reductase
SD89_RS09165	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
SD89_RS09175	COG3404	Formiminotransferase-cyclodeaminase
SD89_RS09190	COG0531	amino acid
SD89_RS09220	COG3590	peptidase
SD89_RS09225	COG0366	Alpha amylase catalytic
SD89_RS09230	COG1263	PTS System
SD89_RS09230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD89_RS09235	COG2188	Transcriptional regulator
SD89_RS09245	COG2514	catechol 2,3-dioxygenase activity
SD89_RS09255	COG0602	queuosine metabolic process
SD89_RS09270	COG1328	CTP reductase activity
SD89_RS09295	COG1393	Belongs to the ArsC family
SD89_RS09310	COG0519	Catalyzes the synthesis of GMP from XMP
SD89_RS09355	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD89_RS09360	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD89_RS09365	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD89_RS09450	COG1511	domain protein
SD89_RS09480	COG0305	Participates in initiation and elongation during chromosome replication
SD89_RS09515	COG1760	l-serine dehydratase
SD89_RS09520	COG1760	l-serine dehydratase
SD89_RS09525	COG0741	lytic transglycosylase activity
SD89_RS09530	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SD89_RS09545	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SD89_RS09555	COG0612	Peptidase, M16
SD89_RS09565	COG1215	transferase activity, transferring glycosyl groups
SD89_RS09575	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SD89_RS09595	COG0516	GMP reductase activity
SD89_RS09595	COG0517	IMP dehydrogenase activity
SD89_RS09605	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD89_RS09610	COG0488	(ABC) transporter
SD89_RS09645	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain