DK93_RS00005 PF02195 ParB-like nuclease domain DK93_RS00005 PF08535 KorB domain DK93_RS00010 PF00308 Bacterial dnaA protein DK93_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix DK93_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DK93_RS00015 PF02767 DNA polymerase III beta subunit, central domain DK93_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DK93_RS00020 PF06107 DK93_RS00020 DK93_RS00025 PF01926 50S ribosome-binding GTPase DK93_RS00025 PF06071 Protein of unknown function (DUF933) DK93_RS00030 PF01195 Peptidyl-tRNA hydrolase DK93_RS00035 PF00270 DEAD/DEAH box helicase DK93_RS00035 PF00271 Helicase conserved C-terminal domain DK93_RS00035 PF02559 CarD-like/TRCF domain DK93_RS00035 PF03461 TRCF domain DK93_RS00040 PF01479 S4 domain DK93_RS00045 PF04977 Septum formation initiator DK93_RS00050 PF13354 Beta-lactamase enzyme family DK93_RS00055 PF01171 PP-loop family DK93_RS00060 PF00156 Phosphoribosyl transferase domain DK93_RS00065 PF00004 ATPase family associated with various cellular activities (AAA) DK93_RS00065 PF01434 Peptidase family M41 DK93_RS00065 PF06480 FtsH Extracellular DK93_RS00070 PF13520 Amino acid permease DK93_RS00245 PF05257 CHAP domain DK93_RS00250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DK93_RS00250 PF14572 Phosphoribosyl synthetase-associated domain DK93_RS00255 PF02565 Recombination protein O C terminal DK93_RS00255 PF11967 Recombination protein O N terminal DK93_RS00260 PF02504 Fatty acid synthesis protein DK93_RS00265 PF00550 Phosphopantetheine attachment site DK93_RS00270 PF01259 SAICAR synthetase DK93_RS00275 PF02769 AIR synthase related protein, C-terminal domain DK93_RS00275 PF13507 CobB/CobQ-like glutamine amidotransferase domain DK93_RS00280 PF00156 Phosphoribosyl transferase domain DK93_RS00280 PF13537 Glutamine amidotransferase domain DK93_RS00285 PF00586 AIR synthase related protein, N-terminal domain DK93_RS00285 PF02769 AIR synthase related protein, C-terminal domain DK93_RS00290 PF00551 Formyl transferase DK93_RS00295 PF01808 AICARFT/IMPCHase bienzyme DK93_RS00295 PF02142 MGS-like domain DK93_RS00300 PF05257 CHAP domain DK93_RS00300 PF08460 Bacterial SH3 domain DK93_RS00305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DK93_RS00305 PF02843 Phosphoribosylglycinamide synthetase, C domain DK93_RS00305 PF02844 Phosphoribosylglycinamide synthetase, N domain DK93_RS00310 PF00731 AIR carboxylase DK93_RS00315 PF02222 ATP-grasp domain DK93_RS00325 PF00206 Lyase DK93_RS00325 PF10397 Adenylosuccinate lyase C-terminus DK93_RS00330 PF01381 Helix-turn-helix DK93_RS00335 PF05491 Holliday junction DNA helicase ruvB C-terminus DK93_RS00335 PF05496 Holliday junction DNA helicase ruvB N-terminus DK93_RS00340 PF01451 Low molecular weight phosphotyrosine protein phosphatase DK93_RS00345 PF02493 MORN repeat DK93_RS00350 PF01757 DK93_RS00350 DK93_RS00355 PF00171 Aldehyde dehydrogenase family DK93_RS00355 PF00465 Iron-containing alcohol dehydrogenase DK93_RS00360 PF00107 Zinc-binding dehydrogenase DK93_RS00360 PF08240 Alcohol dehydrogenase GroES-like domain DK93_RS00365 PF01554 MatE DK93_RS00370 PF00338 Ribosomal protein S10p/S20e DK93_RS00375 PF00297 Ribosomal protein L3 DK93_RS00380 PF00573 Ribosomal protein L4/L1 family DK93_RS00385 PF00276 Ribosomal protein L23 DK93_RS00390 PF00181 Ribosomal Proteins L2, RNA binding domain DK93_RS00390 PF03947 Ribosomal Proteins L2, C-terminal domain DK93_RS00395 PF00203 Ribosomal protein S19 DK93_RS00400 PF00237 Ribosomal protein L22p/L17e DK93_RS00405 PF00189 Ribosomal protein S3, C-terminal domain DK93_RS00405 PF07650 KH domain DK93_RS00410 PF00252 Ribosomal protein L16p/L10e DK93_RS00415 PF00831 Ribosomal L29 protein DK93_RS00420 PF00366 Ribosomal protein S17 DK93_RS00425 PF00238 Ribosomal protein L14p/L23e DK93_RS00430 PF00467 KOW motif DK93_RS00430 PF17136 DK93_RS00430 DK93_RS00435 PF00281 Ribosomal protein L5 DK93_RS00435 PF00673 ribosomal L5P family C-terminus DK93_RS00440 PF00253 Ribosomal protein S14p/S29e DK93_RS00445 PF00410 Ribosomal protein S8 DK93_RS00450 PF00347 Ribosomal protein L6 DK93_RS00455 PF00861 Ribosomal L18p/L5e family DK93_RS00460 PF00333 Ribosomal protein S5, N-terminal domain DK93_RS00460 PF03719 Ribosomal protein S5, C-terminal domain DK93_RS00465 PF00327 Ribosomal protein L30p/L7e DK93_RS00470 PF00828 Ribosomal protein L18e/L15 DK93_RS00475 PF00344 SecY translocase DK93_RS00480 PF00406 Adenylate kinase DK93_RS00485 PF01176 Translation initiation factor 1A / IF-1 DK93_RS00490 PF00416 Ribosomal protein S13/S18 DK93_RS00495 PF00411 Ribosomal protein S11 DK93_RS00500 PF01000 RNA polymerase Rpb3/RpoA insert domain DK93_RS00500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DK93_RS00500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DK93_RS00505 PF01196 Ribosomal protein L17 DK93_RS00595 PF00288 GHMP kinases N terminal domain DK93_RS00600 PF08544 GHMP kinases C terminal DK93_RS00605 PF01047 MarR family DK93_RS00610 PF00005 ABC transporter DK93_RS00615 PF00950 DK93_RS00615 DK93_RS00620 PF01230 HIT domain DK93_RS00625 PF00579 tRNA synthetases class I (W and Y) DK93_RS00625 PF01479 S4 domain DK93_RS00630 PF00905 Penicillin binding protein transpeptidase domain DK93_RS00630 PF00912 Transglycosylase DK93_RS00635 PF00562 RNA polymerase Rpb2, domain 6 DK93_RS00635 PF04560 RNA polymerase Rpb2, domain 7 DK93_RS00635 PF04561 RNA polymerase Rpb2, domain 2 DK93_RS00635 PF04563 RNA polymerase beta subunit DK93_RS00635 PF04565 RNA polymerase Rpb2, domain 3 DK93_RS00635 PF10385 RNA polymerase beta subunit external 1 domain DK93_RS00640 PF00623 RNA polymerase Rpb1, domain 2 DK93_RS00640 PF04983 RNA polymerase Rpb1, domain 3 DK93_RS00640 PF04997 RNA polymerase Rpb1, domain 1 DK93_RS00640 PF04998 RNA polymerase Rpb1, domain 5 DK93_RS00640 PF05000 RNA polymerase Rpb1, domain 4 DK93_RS00645 PF06279 DK93_RS00645 DK93_RS00650 PF00437 Type II/IV secretion system protein DK93_RS00660 PF07963 Prokaryotic N-terminal methylation motif DK93_RS00670 PF11773 DK93_RS00670 DK93_RS00675 PF15980 DK93_RS00675 DK93_RS00685 PF02384 N-6 DNA Methylase DK93_RS00690 PF00871 Acetokinase family DK93_RS00700 PF03807 NADP oxidoreductase coenzyme F420-dependent DK93_RS00700 PF14748 Pyrroline-5-carboxylate reductase dimerisation DK93_RS00705 PF05343 M42 glutamyl aminopeptidase DK93_RS00710 PF15513 Domain of unknown function (DUF4651) DK93_RS00715 PF00085 Thioredoxin DK93_RS00720 PF01588 Putative tRNA binding domain DK93_RS00720 PF14794 Domain of unknown function (DUF4479) DK93_RS00725 PF00436 Single-strand binding protein family DK93_RS00730 PF01712 Deoxynucleoside kinase DK93_RS00735 PF01207 Dihydrouridine synthase (Dus) DK93_RS00740 PF01430 Hsp33 protein DK93_RS00745 PF05043 Mga helix-turn-helix domain DK93_RS00745 PF08270 DK93_RS00745 DK93_RS00745 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DK93_RS00750 PF05738 Cna protein B-type domain DK93_RS00750 PF08341 Fibronectin-binding protein signal sequence DK93_RS00755 PF10502 Signal peptidase, peptidase S26 DK93_RS00760 PF12892 T surface-antigen of pili DK93_RS00765 PF04203 Sortase family DK93_RS00775 PF12833 Helix-turn-helix domain DK93_RS00780 PF02986 Fibronectin binding repeat DK93_RS00780 PF05738 Cna protein B-type domain DK93_RS00780 PF08341 Fibronectin-binding protein signal sequence DK93_RS00790 PF02667 DK93_RS00790 DK93_RS00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK93_RS00795 PF03466 LysR substrate binding domain DK93_RS00800 PF00108 Thiolase, N-terminal domain DK93_RS00800 PF02803 Thiolase, C-terminal domain DK93_RS00805 PF01144 Coenzyme A transferase DK93_RS00810 PF01144 Coenzyme A transferase DK93_RS00815 PF08348 DK93_RS00815 DK93_RS00815 PF13309 DK93_RS00815 DK93_RS00820 PF01042 Endoribonuclease L-PSP DK93_RS00825 PF13303 DK93_RS00825 DK93_RS00835 PF01496 V-type ATPase 116kDa subunit family DK93_RS00840 PF00137 ATP synthase subunit C DK93_RS00850 PF01992 ATP synthase (C/AC39) subunit DK93_RS00855 PF01990 ATP synthase (F/14-kDa) subunit DK93_RS00860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK93_RS00860 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK93_RS00860 PF16886 DK93_RS00860 DK93_RS00865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK93_RS00865 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK93_RS00870 PF01813 ATP synthase subunit D DK93_RS00875 PF05816 DK93_RS00875 DK93_RS00885 PF00709 Adenylosuccinate synthetase DK93_RS00890 PF02608 Basic membrane protein DK93_RS00895 PF00467 KOW motif DK93_RS00895 PF02357 Transcription termination factor nusG DK93_RS00900 PF07461 Nicotine adenine dinucleotide glycohydrolase (NADase) DK93_RS00905 PF16718 DK93_RS00905 DK93_RS00910 PF01289 Thiol-activated cytolysin DK93_RS00920 PF01053 Cys/Met metabolism PLP-dependent enzyme DK93_RS00925 PF00133 tRNA synthetases class I (I, L, M and V) DK93_RS00925 PF08264 Anticodon-binding domain of tRNA DK93_RS00925 PF09334 tRNA synthetases class I (M) DK93_RS00925 PF13603 Leucyl-tRNA synthetase, Domain 2 DK93_RS00930 PF03611 DK93_RS00930 DK93_RS00935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS00940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK93_RS00945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK93_RS00950 PF01261 Xylose isomerase-like TIM barrel DK93_RS00955 PF00596 Class II Aldolase and Adducin N-terminal domain DK93_RS00960 PF00874 PRD domain DK93_RS00960 PF08279 HTH domain DK93_RS00965 PF13483 Beta-lactamase superfamily domain DK93_RS00970 PF00005 ABC transporter DK93_RS00970 PF00571 CBS domain DK93_RS00975 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS00975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DK93_RS00980 PF00476 DNA polymerase family A DK93_RS00980 PF01367 5'-3' exonuclease, C-terminal SAM fold DK93_RS00980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DK93_RS00985 PF13380 CoA binding domain DK93_RS00990 PF01475 Ferric uptake regulator family DK93_RS00995 PF06161 DK93_RS00995 DK93_RS01000 PF01702 Queuine tRNA-ribosyltransferase DK93_RS01005 PF02632 BioY family DK93_RS01010 PF12706 Beta-lactamase superfamily domain DK93_RS01015 PF14437 DK93_RS01015 DK93_RS01020 PF01841 Transglutaminase-like superfamily DK93_RS01025 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DK93_RS01025 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK93_RS01030 PF00342 Phosphoglucose isomerase DK93_RS01035 PF05043 Mga helix-turn-helix domain DK93_RS01035 PF08270 DK93_RS01035 DK93_RS01035 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DK93_RS01040 PF01694 Rhomboid family DK93_RS01045 PF00483 Nucleotidyl transferase DK93_RS01050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DK93_RS01050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DK93_RS01055 PF12802 MarR family DK93_RS01060 PF00005 ABC transporter DK93_RS01060 PF00664 ABC transporter transmembrane region DK93_RS01065 PF00005 ABC transporter DK93_RS01065 PF00664 ABC transporter transmembrane region DK93_RS01070 PF02677 DK93_RS01070 DK93_RS01075 PF00692 dUTPase DK93_RS01080 PF13481 AAA domain DK93_RS01080 PF13541 Subunit ChlI of Mg-chelatase DK93_RS01085 PF00484 Carbonic anhydrase DK93_RS01090 PF01987 Mitochondrial biogenesis AIM24 DK93_RS01100 PF00749 tRNA synthetases class I (E and Q), catalytic domain DK93_RS01105 PF14501 GHKL domain DK93_RS01110 PF14501 GHKL domain DK93_RS01115 PF00072 Response regulator receiver domain DK93_RS01115 PF04397 LytTr DNA-binding domain DK93_RS01120 PF00825 Ribonuclease P DK93_RS01125 PF02096 60Kd inner membrane protein DK93_RS01130 PF01424 R3H domain DK93_RS01130 PF13083 KH domain DK93_RS01130 PF14804 Jag N-terminus DK93_RS01135 PF00468 Ribosomal protein L34 DK93_RS01140 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DK93_RS01145 PF01547 Bacterial extracellular solute-binding protein DK93_RS01150 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS01160 PF04854 DK93_RS01160 DK93_RS01165 PF00701 Dihydrodipicolinate synthetase family DK93_RS01170 PF00480 ROK family DK93_RS01175 PF01380 SIS domain DK93_RS01175 PF01418 Helix-turn-helix domain, rpiR family DK93_RS01180 PF01026 TatD related DNase DK93_RS01185 PF13331 DK93_RS01185 DK93_RS01185 PF13662 Toprim domain DK93_RS01190 PF00398 Ribosomal RNA adenine dimethylase DK93_RS01195 PF03193 Protein of unknown function, DUF258 DK93_RS01195 PF16745 DK93_RS01195 DK93_RS01200 PF00834 Ribulose-phosphate 3 epimerase family DK93_RS01205 PF04263 Thiamin pyrophosphokinase, catalytic domain DK93_RS01205 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DK93_RS01210 PF02646 DK93_RS01210 DK93_RS01215 PF01966 HD domain DK93_RS01220 PF00156 Phosphoribosyl transferase domain DK93_RS01220 PF09182 Bacterial purine repressor, N-terminal DK93_RS01230 PF00164 Ribosomal protein S12/S23 DK93_RS01235 PF00177 Ribosomal protein S7p/S5e DK93_RS01240 PF00009 Elongation factor Tu GTP binding domain DK93_RS01240 PF00679 Elongation factor G C-terminus DK93_RS01240 PF03144 Elongation factor Tu domain 2 DK93_RS01240 PF03764 Elongation factor G, domain IV DK93_RS01240 PF14492 Elongation Factor G, domain II DK93_RS01245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK93_RS01245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DK93_RS01250 PF00005 ABC transporter DK93_RS01255 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK93_RS01255 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS01260 PF09972 DK93_RS01260 DK93_RS01265 PF02673 DK93_RS01265 DK93_RS01270 PF05389 Negative regulator of genetic competence (MecA) DK93_RS01275 PF00953 Glycosyl transferase family 4 DK93_RS01280 PF00005 ABC transporter DK93_RS01285 PF01458 Uncharacterized protein family (UPF0051) DK93_RS01290 PF00266 Aminotransferase class-V DK93_RS01295 PF01592 NifU-like N terminal domain DK93_RS01300 PF01458 Uncharacterized protein family (UPF0051) DK93_RS01305 PF00768 D-alanyl-D-alanine carboxypeptidase DK93_RS01305 PF01351 Ribonuclease HII DK93_RS01310 PF00768 D-alanyl-D-alanine carboxypeptidase DK93_RS01310 PF07943 Penicillin-binding protein 5, C-terminal domain DK93_RS01315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK93_RS01320 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS01325 PF12911 DK93_RS01325 DK93_RS01330 PF00005 ABC transporter DK93_RS01330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK93_RS01335 PF00005 ABC transporter DK93_RS01335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK93_RS01380 PF01416 tRNA pseudouridine synthase DK93_RS01385 PF08543 Phosphomethylpyrimidine kinase DK93_RS01390 PF07155 ECF-type riboflavin transporter, S component DK93_RS01395 PF04260 Protein of unknown function (DUF436) DK93_RS01400 PF00924 Mechanosensitive ion channel DK93_RS01405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK93_RS01405 PF05697 Bacterial trigger factor protein (TF) DK93_RS01405 PF05698 Bacterial trigger factor protein (TF) C-terminus DK93_RS01410 PF05066 HB1, ASXL, restriction endonuclease HTH domain DK93_RS01415 PF00117 Glutamine amidotransferase class-I DK93_RS01415 PF06418 CTP synthase N-terminus DK93_RS01420 PF12146 Putative lysophospholipase DK93_RS01430 PF01116 Fructose-bisphosphate aldolase class-II DK93_RS01435 PF00830 Ribosomal L28 family DK93_RS01440 PF03780 DK93_RS01440 DK93_RS01445 PF02734 DAK2 domain DK93_RS01445 PF13684 Dihydroxyacetone kinase family DK93_RS01450 PF01145 SPFH domain / Band 7 family DK93_RS01455 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DK93_RS01460 PF00162 Phosphoglycerate kinase DK93_RS01465 PF06081 DK93_RS01465 DK93_RS01470 PF13411 MerR HTH family regulatory protein DK93_RS01475 PF00120 Glutamine synthetase, catalytic domain DK93_RS01475 PF03951 Glutamine synthetase, beta-Grasp domain DK93_RS01480 PF00753 Metallo-beta-lactamase superfamily DK93_RS01480 PF07521 RNA-metabolising metallo-beta-lactamase DK93_RS01485 PF07288 Protein of unknown function (DUF1447) DK93_RS01490 PF00814 Glycoprotease family DK93_RS01495 PF13508 Acetyltransferase (GNAT) domain DK93_RS01500 PF00814 Glycoprotease family DK93_RS01505 PF00253 Ribosomal protein S14p/S29e DK93_RS01510 PF00392 Bacterial regulatory proteins, gntR family DK93_RS01515 PF01048 Phosphorylase superfamily DK93_RS01520 PF01773 Na+ dependent nucleoside transporter N-terminus DK93_RS01520 PF07662 Na+ dependent nucleoside transporter C-terminus DK93_RS01525 PF01791 DeoC/LacD family aldolase DK93_RS01530 PF03486 HI0933-like protein DK93_RS01535 PF04394 DK93_RS01535 DK93_RS01535 PF08279 HTH domain DK93_RS01540 PF00929 Exonuclease DK93_RS01545 PF13411 MerR HTH family regulatory protein DK93_RS01550 PF02575 YbaB/EbfC DNA-binding family DK93_RS01555 PF01381 Helix-turn-helix DK93_RS01560 PF01381 Helix-turn-helix DK93_RS01565 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DK93_RS01565 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DK93_RS01565 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DK93_RS01570 PF13545 Crp-like helix-turn-helix domain DK93_RS01575 PF07690 Major Facilitator Superfamily DK93_RS01580 PF00230 Major intrinsic protein DK93_RS01585 PF01925 DK93_RS01585 DK93_RS01590 PF14506 CppA N-terminal DK93_RS01590 PF14507 CppA C-terminal DK93_RS01595 PF00144 Beta-lactamase DK93_RS01600 PF01228 Glycine radical DK93_RS01600 PF02901 Pyruvate formate lyase DK93_RS01605 PF00817 impB/mucB/samB family DK93_RS01605 PF11798 IMS family HHH motif DK93_RS01605 PF11799 impB/mucB/samB family C-terminal domain DK93_RS01615 PF13538 UvrD-like helicase C-terminal domain DK93_RS01615 PF13604 AAA domain DK93_RS01615 PF14490 Helix-hairpin-helix containing domain DK93_RS01620 PF00717 Peptidase S24-like DK93_RS01625 PF01351 Ribonuclease HII DK93_RS01625 PF11858 Domain of unknown function (DUF3378) DK93_RS01635 PF02674 DK93_RS01635 DK93_RS01640 PF00488 MutS domain V DK93_RS01640 PF01713 Smr domain DK93_RS01645 PF01569 PAP2 superfamily DK93_RS01650 PF00085 Thioredoxin DK93_RS01655 PF01381 Helix-turn-helix DK93_RS01660 PF00633 Helix-hairpin-helix motif DK93_RS01660 PF00730 HhH-GPD superfamily base excision DNA repair protein DK93_RS01660 PF14815 NUDIX domain DK93_RS01670 PF01250 Ribosomal protein S6 DK93_RS01675 PF00436 Single-strand binding protein family DK93_RS01680 PF01084 Ribosomal protein S18 DK93_RS01685 PF06570 DK93_RS01685 DK93_RS01690 PF01544 CorA-like Mg2+ transporter protein DK93_RS01695 PF00005 ABC transporter DK93_RS01700 PF00557 Metallopeptidase family M24 DK93_RS01700 PF01321 Creatinase/Prolidase N-terminal domain DK93_RS01705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DK93_RS01710 PF01132 Elongation factor P (EF-P) OB domain DK93_RS01710 PF08207 Elongation factor P (EF-P) KOW-like domain DK93_RS01710 PF09285 Elongation factor P, C-terminal DK93_RS01715 PF03780 DK93_RS01715 DK93_RS01720 PF01029 NusB family DK93_RS01725 PF00356 Bacterial regulatory proteins, lacI family DK93_RS01725 PF13377 Periplasmic binding protein-like domain DK93_RS01730 PF00251 Glycosyl hydrolases family 32 N-terminal domain DK93_RS01730 PF08244 Glycosyl hydrolases family 32 C terminal DK93_RS01735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK93_RS01735 PF00367 phosphotransferase system, EIIB DK93_RS01735 PF02378 Phosphotransferase system, EIIC DK93_RS01745 PF00480 ROK family DK93_RS01750 PF01238 Phosphomannose isomerase type I DK93_RS01755 PF01043 SecA preprotein cross-linking domain DK93_RS01755 PF02810 SEC-C motif DK93_RS01755 PF07516 SecA Wing and Scaffold domain DK93_RS01755 PF07517 SecA DEAD-like domain DK93_RS01760 PF01648 4'-phosphopantetheinyl transferase superfamily DK93_RS01765 PF00842 Alanine racemase, C-terminal domain DK93_RS01765 PF01168 Alanine racemase, N-terminal domain DK93_RS01770 PF05257 CHAP domain DK93_RS01775 PF05031 Iron Transport-associated domain DK93_RS01775 PF07550 DK93_RS01775 DK93_RS01775 PF13855 Leucine rich repeat DK93_RS01780 PF11545 Cell surface heme-binding protein Shp DK93_RS01785 PF01497 Periplasmic binding protein DK93_RS01790 PF01032 FecCD transport family DK93_RS01795 PF00005 ABC transporter DK93_RS01800 PF00005 ABC transporter DK93_RS01800 PF00664 ABC transporter transmembrane region DK93_RS01805 PF00005 ABC transporter DK93_RS01805 PF00664 ABC transporter transmembrane region DK93_RS01810 PF09605 DK93_RS01810 DK93_RS01815 PF02361 Cobalt transport protein DK93_RS01820 PF00005 ABC transporter DK93_RS01825 PF00270 DEAD/DEAH box helicase DK93_RS01825 PF00271 Helicase conserved C-terminal domain DK93_RS01825 PF17191 DK93_RS01825 DK93_RS01830 PF00005 ABC transporter DK93_RS01840 PF00710 Asparaginase DK93_RS01845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DK93_RS01845 PF08282 haloacid dehalogenase-like hydrolase DK93_RS01850 PF00582 Universal stress protein family DK93_RS01855 PF00155 Aminotransferase class I and II DK93_RS01860 PF06018 CodY GAF-like domain DK93_RS01860 PF08222 CodY helix-turn-helix domain DK93_RS01865 PF00857 Isochorismatase family DK93_RS01870 PF02896 PEP-utilising enzyme, TIM barrel domain DK93_RS01875 PF02686 Glu-tRNAGln amidotransferase C subunit DK93_RS01880 PF01425 Amidase DK93_RS01885 PF02637 GatB domain DK93_RS01885 PF02934 GatB/GatE catalytic domain DK93_RS01895 PF04226 DK93_RS01895 DK93_RS01900 PF00300 Histidine phosphatase superfamily (branch 1) DK93_RS01905 PF02557 D-alanyl-D-alanine carboxypeptidase DK93_RS01910 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK93_RS01915 PF01628 HrcA protein C terminal domain DK93_RS01915 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DK93_RS01920 PF01025 GrpE DK93_RS01925 PF00012 Hsp70 protein DK93_RS01930 PF00226 DnaJ domain DK93_RS01930 PF00684 DnaJ central domain DK93_RS01930 PF01556 DnaJ C terminal domain DK93_RS01935 PF00378 Enoyl-CoA hydratase/isomerase family DK93_RS01940 PF01047 MarR family DK93_RS01945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DK93_RS01945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DK93_RS01950 PF00550 Phosphopantetheine attachment site DK93_RS01955 PF03060 Nitronate monooxygenase DK93_RS01960 PF00698 Acyl transferase domain DK93_RS01965 PF13561 Enoyl-(Acyl carrier protein) reductase DK93_RS01970 PF00109 Beta-ketoacyl synthase, N-terminal domain DK93_RS01970 PF02801 Beta-ketoacyl synthase, C-terminal domain DK93_RS01975 PF00364 Biotin-requiring enzyme DK93_RS01980 PF07977 FabA-like domain DK93_RS01985 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DK93_RS01985 PF02785 Biotin carboxylase C-terminal domain DK93_RS01985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DK93_RS01990 PF01039 Carboxyl transferase domain DK93_RS01995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DK93_RS02000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK93_RS02000 PF02403 Seryl-tRNA synthetase N-terminal domain DK93_RS02005 PF06115 DK93_RS02005 DK93_RS02010 PF03613 DK93_RS02010 DK93_RS02015 PF03609 DK93_RS02015 DK93_RS02020 PF03610 PTS system fructose IIA component DK93_RS02020 PF03830 PTS system sorbose subfamily IIB component DK93_RS02025 PF08282 haloacid dehalogenase-like hydrolase DK93_RS02030 PF00860 Permease family DK93_RS02035 PF02367 Uncharacterised P-loop hydrolase UPF0079 DK93_RS02040 PF00583 Acetyltransferase (GNAT) family DK93_RS02045 PF03816 Cell envelope-related transcriptional attenuator domain DK93_RS02055 PF01230 HIT domain DK93_RS02060 PF00005 ABC transporter DK93_RS02065 PF05975 DK93_RS02065 DK93_RS02070 PF01636 Phosphotransferase enzyme family DK93_RS02075 PF02390 Putative methyltransferase DK93_RS02085 PF02576 Uncharacterised BCR, YhbC family COG0779 DK93_RS02090 PF08529 NusA N-terminal domain DK93_RS02090 PF13184 NusA-like KH domain DK93_RS02095 PF04296 Protein of unknown function (DUF448) DK93_RS02100 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DK93_RS02105 PF00009 Elongation factor Tu GTP binding domain DK93_RS02105 PF04760 Translation initiation factor IF-2, N-terminal region DK93_RS02105 PF11987 Translation-initiation factor 2 DK93_RS02110 PF02033 Ribosome-binding factor A DK93_RS02115 PF07859 alpha/beta hydrolase fold DK93_RS02120 PF03965 Penicillinase repressor DK93_RS02125 PF00122 E1-E2 ATPase DK93_RS02125 PF00403 Heavy-metal-associated domain DK93_RS02125 PF00702 haloacid dehalogenase-like hydrolase DK93_RS02130 PF00403 Heavy-metal-associated domain DK93_RS02135 PF00455 DK93_RS02135 DK93_RS02135 PF08220 DeoR-like helix-turn-helix domain DK93_RS02140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK93_RS02145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS02150 PF03611 DK93_RS02150 DK93_RS02155 PF02502 Ribose/Galactose Isomerase DK93_RS02160 PF02502 Ribose/Galactose Isomerase DK93_RS02170 PF01791 DeoC/LacD family aldolase DK93_RS02175 PF03458 DK93_RS02175 DK93_RS02180 PF08282 haloacid dehalogenase-like hydrolase DK93_RS02185 PF00440 Bacterial regulatory proteins, tetR family DK93_RS02190 PF02645 Uncharacterised protein, DegV family COG1307 DK93_RS02200 PF01895 PhoU domain DK93_RS02200 PF02690 DK93_RS02200 DK93_RS02205 PF01979 Amidohydrolase family DK93_RS02210 PF00248 Aldo/keto reductase family DK93_RS02215 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DK93_RS02220 PF02091 Glycyl-tRNA synthetase alpha subunit DK93_RS02225 PF02092 DK93_RS02225 DK93_RS02230 PF05979 Bacterial protein of unknown function (DUF896) DK93_RS02235 PF03413 Peptidase propeptide and YPEB domain DK93_RS02240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK93_RS02240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK93_RS02245 PF01266 FAD dependent oxidoreductase DK93_RS02245 PF16901 DK93_RS02245 DK93_RS02250 PF00230 Major intrinsic protein DK93_RS02255 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS02260 PF05043 Mga helix-turn-helix domain DK93_RS02265 PF00923 Transaldolase DK93_RS02270 PF00456 Transketolase, thiamine diphosphate binding domain DK93_RS02270 PF02779 Transketolase, pyrimidine binding domain DK93_RS02270 PF02780 Transketolase, C-terminal domain DK93_RS02275 PF08951 Enterocin A Immunity DK93_RS02280 PF00005 ABC transporter DK93_RS02290 PF00696 Amino acid kinase family DK93_RS02295 PF00171 Aldehyde dehydrogenase family DK93_RS02305 PF01795 MraW methylase family DK93_RS02310 PF04977 Septum formation initiator DK93_RS02315 PF00905 Penicillin binding protein transpeptidase domain DK93_RS02315 PF03717 Penicillin-binding Protein dimerisation domain DK93_RS02315 PF03793 PASTA domain DK93_RS02320 PF00953 Glycosyl transferase family 4 DK93_RS02320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DK93_RS02325 PF00270 DEAD/DEAH box helicase DK93_RS02325 PF00271 Helicase conserved C-terminal domain DK93_RS02330 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS02335 PF00005 ABC transporter DK93_RS02340 PF13268 DK93_RS02340 DK93_RS02345 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS02350 PF00324 Amino acid permease DK93_RS02355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DK93_RS02360 PF02540 NAD synthase DK93_RS02365 PF03051 Peptidase C1-like family DK93_RS02370 PF00905 Penicillin binding protein transpeptidase domain DK93_RS02370 PF00912 Transglycosylase DK93_RS02375 PF03838 Recombination protein U DK93_RS02380 PF06908 Protein of unknown function (DUF1273) DK93_RS02385 PF05103 DivIVA protein DK93_RS02390 PF01170 Putative RNA methylase family UPF0020 DK93_RS02390 PF02926 THUMP domain DK93_RS02400 PF02664 S-Ribosylhomocysteinase (LuxS) DK93_RS02405 PF02447 DK93_RS02405 DK93_RS02410 PF13561 Enoyl-(Acyl carrier protein) reductase DK93_RS02415 PF01144 Coenzyme A transferase DK93_RS02420 PF01144 Coenzyme A transferase DK93_RS02425 PF00108 Thiolase, N-terminal domain DK93_RS02425 PF02803 Thiolase, C-terminal domain DK93_RS02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK93_RS02430 PF03466 LysR substrate binding domain DK93_RS02435 PF00013 KH domain DK93_RS02435 PF01966 HD domain DK93_RS02435 PF12072 DK93_RS02435 DK93_RS02440 PF00625 Guanylate kinase DK93_RS02445 PF01192 RNA polymerase Rpb6 DK93_RS02450 PF00271 Helicase conserved C-terminal domain DK93_RS02450 PF04851 Type III restriction enzyme, res subunit DK93_RS02455 PF00551 Formyl transferase DK93_RS02455 PF02911 Formyl transferase, C-terminal domain DK93_RS02460 PF01029 NusB family DK93_RS02460 PF01189 NOL1/NOP2/sun family DK93_RS02465 PF13672 Protein phosphatase 2C DK93_RS02470 PF00069 Protein kinase domain DK93_RS02470 PF03793 PASTA domain DK93_RS02475 PF09922 Cell wall-active antibiotics response protein (DUF2154) DK93_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS02480 PF07730 Histidine kinase DK93_RS02485 PF00072 Response regulator receiver domain DK93_RS02485 PF00196 Bacterial regulatory proteins, luxR family DK93_RS02490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DK93_RS02490 PF08282 haloacid dehalogenase-like hydrolase DK93_RS02495 PF00575 S1 RNA binding domain DK93_RS02500 PF00291 Pyridoxal-phosphate dependent enzyme DK93_RS02505 PF01205 Uncharacterized protein family UPF0029 DK93_RS02505 PF09186 Domain of unknown function (DUF1949) DK93_RS02510 PF00270 DEAD/DEAH box helicase DK93_RS02510 PF00271 Helicase conserved C-terminal domain DK93_RS02520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DK93_RS02520 PF16321 DK93_RS02520 DK93_RS02580 PF04167 Protein of unknown function (DUF402) DK93_RS02585 PF02631 RecX family DK93_RS02590 PF01938 TRAM domain DK93_RS02590 PF05958 tRNA (Uracil-5-)-methyltransferase DK93_RS02595 PF14501 GHKL domain DK93_RS02600 PF01074 Glycosyl hydrolases family 38 N-terminal domain DK93_RS02600 PF07748 Glycosyl hydrolases family 38 C-terminal domain DK93_RS02600 PF09261 Alpha mannosidase, middle domain DK93_RS02605 PF06824 Protein of unknown function (DUF1237) DK93_RS02610 PF00392 Bacterial regulatory proteins, gntR family DK93_RS02610 PF13377 Periplasmic binding protein-like domain DK93_RS02615 PF07555 beta-N-acetylglucosaminidase DK93_RS02620 PF00232 Glycosyl hydrolase family 1 DK93_RS02625 PF00480 ROK family DK93_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS02640 PF12010 DK93_RS02640 DK93_RS02640 PF13416 Bacterial extracellular solute-binding protein DK93_RS02645 PF04854 DK93_RS02645 DK93_RS02650 PF06580 DK93_RS02650 DK93_RS02655 PF00072 Response regulator receiver domain DK93_RS02655 PF12833 Helix-turn-helix domain DK93_RS02660 PF00703 Glycosyl hydrolases family 2 DK93_RS02660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DK93_RS02660 PF02837 Glycosyl hydrolases family 2, sugar binding domain DK93_RS02660 PF16355 DK93_RS02660 DK93_RS02665 PF08501 Shikimate dehydrogenase substrate binding domain DK93_RS02670 PF13649 Methyltransferase domain DK93_RS02675 PF07883 Cupin domain DK93_RS02680 PF07883 Cupin domain DK93_RS02685 PF01761 3-dehydroquinate synthase DK93_RS02690 PF00793 DAHP synthetase I family DK93_RS02705 PF08930 Domain of unknown function (DUF1912) DK93_RS02710 PF14520 Helix-hairpin-helix domain DK93_RS02720 PF13238 AAA domain DK93_RS02725 PF00133 tRNA synthetases class I (I, L, M and V) DK93_RS02725 PF08264 Anticodon-binding domain of tRNA DK93_RS02725 PF10458 Valyl tRNA synthetase tRNA binding arm DK93_RS02735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK93_RS02740 PF01544 CorA-like Mg2+ transporter protein DK93_RS02745 PF02683 DK93_RS02745 DK93_RS02750 PF00578 AhpC/TSA family DK93_RS02755 PF01625 Peptide methionine sulfoxide reductase DK93_RS02755 PF01641 SelR domain DK93_RS02760 PF00072 Response regulator receiver domain DK93_RS02760 PF12833 Helix-turn-helix domain DK93_RS02765 PF00672 HAMP domain DK93_RS02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS02765 PF02743 Cache domain DK93_RS02765 PF06580 DK93_RS02765 DK93_RS02770 PF04237 YjbR DK93_RS02775 PF03483 B3/4 domain DK93_RS02780 PF01316 Arginine repressor, DNA binding domain DK93_RS02780 PF02863 Arginine repressor, C-terminal domain DK93_RS02785 PF00027 Cyclic nucleotide-binding domain DK93_RS02785 PF13545 Crp-like helix-turn-helix domain DK93_RS02790 PF02274 Amidinotransferase DK93_RS02795 PF13673 Acetyltransferase (GNAT) domain DK93_RS02800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK93_RS02800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK93_RS02805 PF03606 DK93_RS02805 DK93_RS02810 PF01546 Peptidase family M20/M25/M40 DK93_RS02815 PF00696 Amino acid kinase family DK93_RS02820 PF03590 Aspartate-ammonia ligase DK93_RS02825 PF03602 Conserved hypothetical protein 95 DK93_RS02830 PF01467 Cytidylyltransferase DK93_RS02835 PF05362 Lon protease (S16) C-terminal proteolytic domain DK93_RS02835 PF13180 PDZ domain DK93_RS02840 PF00356 Bacterial regulatory proteins, lacI family DK93_RS02840 PF13377 Periplasmic binding protein-like domain DK93_RS02845 PF06265 Protein of unknown function (DUF1027) DK93_RS02850 PF04055 Radical SAM superfamily DK93_RS02850 PF13394 4Fe-4S single cluster domain DK93_RS02860 PF00210 Ferritin-like domain DK93_RS02865 PF06014 Bacterial protein of unknown function (DUF910) DK93_RS02870 PF00480 ROK family DK93_RS02875 PF00581 Rhodanese-like domain DK93_RS02880 PF00009 Elongation factor Tu GTP binding domain DK93_RS02880 PF00679 Elongation factor G C-terminus DK93_RS02880 PF03144 Elongation factor Tu domain 2 DK93_RS02885 PF11364 DK93_RS02885 DK93_RS02890 PF02875 Mur ligase family, glutamate ligase domain DK93_RS02890 PF08245 Mur ligase middle domain DK93_RS02895 PF03033 Glycosyltransferase family 28 N-terminal domain DK93_RS02895 PF04101 Glycosyltransferase family 28 C-terminal domain DK93_RS02900 PF08478 POTRA domain, FtsQ-type DK93_RS02905 PF02491 SHS2 domain inserted in FTSA DK93_RS02905 PF11983 DK93_RS02905 DK93_RS02905 PF14450 Cell division protein FtsA DK93_RS02910 PF00091 Tubulin/FtsZ family, GTPase domain DK93_RS02910 PF12327 FtsZ family, C-terminal domain DK93_RS02915 PF01168 Alanine racemase, N-terminal domain DK93_RS02920 PF04472 Protein of unknown function (DUF552) DK93_RS02925 PF02325 DK93_RS02925 DK93_RS02930 PF01479 S4 domain DK93_RS02935 PF05103 DivIVA protein DK93_RS02940 PF00133 tRNA synthetases class I (I, L, M and V) DK93_RS02940 PF08264 Anticodon-binding domain of tRNA DK93_RS02945 PF08860 Domain of unknown function (DUF1827) DK93_RS02950 PF00293 NUDIX domain DK93_RS02955 PF00004 ATPase family associated with various cellular activities (AAA) DK93_RS02955 PF02151 UvrB/uvrC motif DK93_RS02955 PF07724 AAA domain (Cdc48 subfamily) DK93_RS02955 PF10431 C-terminal, D2-small domain, of ClpB protein DK93_RS02960 PF08796 Protein of unknown function (DUF1797) DK93_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS02970 PF00005 ABC transporter DK93_RS02975 PF00875 DNA photolyase DK93_RS02975 PF03441 FAD binding domain of DNA photolyase DK93_RS02980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK93_RS02980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK93_RS02980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK93_RS02980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK93_RS02985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DK93_RS02985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DK93_RS02990 PF02601 DK93_RS02990 DK93_RS02990 PF13742 DK93_RS02990 DK93_RS02995 PF02609 Exonuclease VII small subunit DK93_RS03000 PF00348 Polyprenyl synthetase DK93_RS03005 PF01479 S4 domain DK93_RS03005 PF01728 FtsJ-like methyltransferase DK93_RS03010 PF01316 Arginine repressor, DNA binding domain DK93_RS03010 PF02863 Arginine repressor, C-terminal domain DK93_RS03015 PF02463 RecF/RecN/SMC N terminal domain DK93_RS03025 PF02645 Uncharacterised protein, DegV family COG1307 DK93_RS03030 PF13472 GDSL-like Lipase/Acylhydrolase family DK93_RS03035 PF09911 DK93_RS03035 DK93_RS03040 PF00216 Bacterial DNA-binding protein DK93_RS03045 PF00122 E1-E2 ATPase DK93_RS03045 PF00702 haloacid dehalogenase-like hydrolase DK93_RS03050 PF01180 Dihydroorotate dehydrogenase DK93_RS03055 PF00300 Histidine phosphatase superfamily (branch 1) DK93_RS03060 PF02829 3H domain DK93_RS03060 PF08279 HTH domain DK93_RS03070 PF01226 Formate/nitrite transporter DK93_RS03080 PF02132 RecR protein DK93_RS03080 PF13662 Toprim domain DK93_RS03085 PF01820 D-ala D-ala ligase N-terminus DK93_RS03085 PF07478 D-ala D-ala ligase C-terminus DK93_RS03090 PF01225 Mur ligase family, catalytic domain DK93_RS03090 PF02875 Mur ligase family, glutamate ligase domain DK93_RS03090 PF08245 Mur ligase middle domain DK93_RS03095 PF09529 DK93_RS03095 DK93_RS03100 PF00009 Elongation factor Tu GTP binding domain DK93_RS03100 PF03144 Elongation factor Tu domain 2 DK93_RS03100 PF16658 DK93_RS03100 DK93_RS03105 PF00270 DEAD/DEAH box helicase DK93_RS03105 PF00271 Helicase conserved C-terminal domain DK93_RS03110 PF02705 DK93_RS03110 DK93_RS03115 PF01541 GIY-YIG catalytic domain DK93_RS03120 PF05175 Methyltransferase small domain DK93_RS03125 PF01553 Acyltransferase DK93_RS03130 PF10531 SLBB domain DK93_RS03130 PF12836 Helix-hairpin-helix motif DK93_RS03135 PF00753 Metallo-beta-lactamase superfamily DK93_RS03135 PF03772 DK93_RS03135 DK93_RS03135 PF13567 DK93_RS03135 DK93_RS03140 PF06144 DNA polymerase III, delta subunit DK93_RS03145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DK93_RS03145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DK93_RS03160 PF13354 Beta-lactamase enzyme family DK93_RS03165 PF11311 DK93_RS03165 DK93_RS03170 PF02547 Queuosine biosynthesis protein DK93_RS03175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DK93_RS03180 PF00849 RNA pseudouridylate synthase DK93_RS03180 PF01479 S4 domain DK93_RS03185 PF06054 DK93_RS03185 DK93_RS03190 PF01432 Peptidase family M3 DK93_RS03190 PF08439 Oligopeptidase F DK93_RS03195 PF07690 Major Facilitator Superfamily DK93_RS03200 PF01596 O-methyltransferase DK93_RS03205 PF13145 PPIC-type PPIASE domain DK93_RS03210 PF01411 tRNA synthetases class II (A) DK93_RS03210 PF02272 DHHA1 domain DK93_RS03210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DK93_RS03220 PF01381 Helix-turn-helix DK93_RS03230 PF02517 CAAX protease self-immunity DK93_RS03235 PF13333 DK93_RS03235 DK93_RS03240 PF13276 DK93_RS03240 DK93_RS03245 PF01527 Transposase DK93_RS03250 PF00654 Voltage gated chloride channel DK93_RS03255 PF00268 Ribonucleotide reductase, small chain DK93_RS03260 PF00317 Ribonucleotide reductase, all-alpha domain DK93_RS03260 PF02867 Ribonucleotide reductase, barrel domain DK93_RS03260 PF08343 Ribonucleotide reductase N-terminal DK93_RS03265 PF00462 Glutaredoxin DK93_RS03270 PF00381 PTS HPr component phosphorylation site DK93_RS03275 PF00391 PEP-utilising enzyme, mobile domain DK93_RS03275 PF02896 PEP-utilising enzyme, TIM barrel domain DK93_RS03275 PF05524 PEP-utilising enzyme, N-terminal DK93_RS03280 PF00171 Aldehyde dehydrogenase family DK93_RS03285 PF01522 Polysaccharide deacetylase DK93_RS03290 PF00270 DEAD/DEAH box helicase DK93_RS03290 PF00271 Helicase conserved C-terminal domain DK93_RS03295 PF00485 Phosphoribulokinase / Uridine kinase family DK93_RS03300 PF06961 DK93_RS03300 DK93_RS03305 PF13367 DK93_RS03305 DK93_RS03310 PF13185 GAF domain DK93_RS03315 PF12169 DNA polymerase III subunits gamma and tau domain III DK93_RS03315 PF13177 DNA polymerase III, delta subunit DK93_RS03320 PF02237 Biotin protein ligase C terminal domain DK93_RS03320 PF03099 Biotin/lipoate A/B protein ligase family DK93_RS03320 PF08279 HTH domain DK93_RS03325 PF04270 Streptococcal histidine triad protein DK93_RS03325 PF12799 Leucine Rich repeats (2 copies) DK93_RS03330 PF00438 S-adenosylmethionine synthetase, N-terminal domain DK93_RS03330 PF02772 S-adenosylmethionine synthetase, central domain DK93_RS03330 PF02773 S-adenosylmethionine synthetase, C-terminal domain DK93_RS03335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK93_RS03340 PF00746 DK93_RS03340 DK93_RS03350 PF00392 Bacterial regulatory proteins, gntR family DK93_RS03350 PF00571 CBS domain DK93_RS03350 PF03061 Thioesterase superfamily DK93_RS03350 PF07085 DRTGG domain DK93_RS03355 PF00557 Metallopeptidase family M24 DK93_RS03360 PF03631 DK93_RS03360 DK93_RS03365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK93_RS03370 PF01202 Shikimate kinase DK93_RS03375 PF03816 Cell envelope-related transcriptional attenuator domain DK93_RS03380 PF01938 TRAM domain DK93_RS03380 PF05958 tRNA (Uracil-5-)-methyltransferase DK93_RS03390 PF03061 Thioesterase superfamily DK93_RS03395 PF08903 Domain of unknown function (DUF1846) DK93_RS03400 PF07690 Major Facilitator Superfamily DK93_RS03405 PF03061 Thioesterase superfamily DK93_RS03410 PF00849 RNA pseudouridylate synthase DK93_RS03410 PF01479 S4 domain DK93_RS03415 PF00665 Integrase core domain DK93_RS03420 PF13276 DK93_RS03420 DK93_RS03425 PF01527 Transposase DK93_RS03430 PF07158 DK93_RS03430 DK93_RS03435 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DK93_RS03435 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DK93_RS03440 PF13276 DK93_RS03440 DK93_RS03440 PF13333 DK93_RS03440 DK93_RS03445 PF13518 Helix-turn-helix domain DK93_RS03450 PF01018 GTP1/OBG DK93_RS03450 PF01926 50S ribosome-binding GTPase DK93_RS03450 PF09269 Domain of unknown function (DUF1967) DK93_RS03460 PF04973 DK93_RS03460 DK93_RS03465 PF00232 Glycosyl hydrolase family 1 DK93_RS03470 PF05913 Bacterial protein of unknown function (DUF871) DK93_RS03475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK93_RS03475 PF00874 PRD domain DK93_RS03475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS03475 PF05043 Mga helix-turn-helix domain DK93_RS03475 PF08279 HTH domain DK93_RS03480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS03485 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK93_RS03490 PF11687 DK93_RS03490 DK93_RS03495 PF02378 Phosphotransferase system, EIIC DK93_RS03500 PF00005 ABC transporter DK93_RS03505 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK93_RS03505 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS03510 PF00271 Helicase conserved C-terminal domain DK93_RS03510 PF02151 UvrB/uvrC motif DK93_RS03510 PF04851 Type III restriction enzyme, res subunit DK93_RS03510 PF12344 Ultra-violet resistance protein B DK93_RS03515 PF12459 DK93_RS03515 DK93_RS03520 PF00501 AMP-binding enzyme DK93_RS03520 PF13193 AMP-binding enzyme C-terminal domain DK93_RS03525 PF03062 DK93_RS03525 DK93_RS03530 PF00550 Phosphopantetheine attachment site DK93_RS03535 PF04914 DltD C-terminal region DK93_RS03535 PF04915 DltD N-terminal region DK93_RS03535 PF04918 DltD central region DK93_RS03540 PF07859 alpha/beta hydrolase fold DK93_RS03550 PF00665 Integrase core domain DK93_RS03550 PF13936 Helix-turn-helix domain DK93_RS03555 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS03560 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS03565 PF13416 Bacterial extracellular solute-binding protein DK93_RS03570 PF00356 Bacterial regulatory proteins, lacI family DK93_RS03570 PF13377 Periplasmic binding protein-like domain DK93_RS03575 PF02446 4-alpha-glucanotransferase DK93_RS03580 PF00343 Carbohydrate phosphorylase DK93_RS03585 PF12978 Domain of Unknown Function with PDB structure (DUF3862) DK93_RS03590 PF00589 Phage integrase family DK93_RS03590 PF14657 DK93_RS03590 DK93_RS03590 PF14659 Phage integrase, N-terminal SAM-like domain DK93_RS03595 PF10546 DK93_RS03595 DK93_RS03600 PF00717 Peptidase S24-like DK93_RS03600 PF01381 Helix-turn-helix DK93_RS03620 PF01381 Helix-turn-helix DK93_RS03650 PF13443 Cro/C1-type HTH DNA-binding domain DK93_RS03675 PF13479 DK93_RS03675 DK93_RS03680 PF00271 Helicase conserved C-terminal domain DK93_RS03680 PF04851 Type III restriction enzyme, res subunit DK93_RS03685 PF05037 DK93_RS03685 DK93_RS03695 PF09250 Bifunctional DNA primase/polymerase, N-terminal DK93_RS03700 PF08774 VRR-NUC domain DK93_RS03715 PF12363 DK93_RS03715 DK93_RS03730 PF05709 Phage tail protein DK93_RS03735 PF06605 Prophage endopeptidase tail DK93_RS03740 PF07212 Hyaluronidase protein (HylP) DK93_RS03745 PF07902 DK93_RS03745 DK93_RS03750 PF07761 DK93_RS03750 DK93_RS03755 PF07104 DK93_RS03755 DK93_RS03760 PF05105 DK93_RS03760 DK93_RS03770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK93_RS03780 PF05257 CHAP domain DK93_RS03780 PF08460 Bacterial SH3 domain DK93_RS03785 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK93_RS03805 PF09335 DK93_RS03805 DK93_RS03815 PF00005 ABC transporter DK93_RS03820 PF00392 Bacterial regulatory proteins, gntR family DK93_RS03825 PF01336 OB-fold nucleic acid binding domain DK93_RS03825 PF02811 PHP domain DK93_RS03825 PF07733 Bacterial DNA polymerase III alpha subunit DK93_RS03825 PF14579 Helix-hairpin-helix motif DK93_RS03830 PF00365 Phosphofructokinase DK93_RS03835 PF00224 Pyruvate kinase, barrel domain DK93_RS03835 PF02887 Pyruvate kinase, alpha/beta domain DK93_RS03840 PF00717 Peptidase S24-like DK93_RS03840 PF10502 Signal peptidase, peptidase S26 DK93_RS03845 PF01380 SIS domain DK93_RS03845 PF13522 Glutamine amidotransferase domain DK93_RS03850 PF03831 PhnA protein DK93_RS03850 PF08274 PhnA Zinc-Ribbon DK93_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS03860 PF00005 ABC transporter DK93_RS03865 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK93_RS03870 PF07373 DK93_RS03870 DK93_RS03875 PF01545 Cation efflux family DK93_RS03875 PF16916 DK93_RS03875 DK93_RS03880 PF01235 DK93_RS03880 DK93_RS03885 PF00580 UvrD/REP helicase N-terminal domain DK93_RS03885 PF13361 UvrD-like helicase C-terminal domain DK93_RS03890 PF04226 DK93_RS03890 DK93_RS03900 PF10031 DK93_RS03900 DK93_RS03905 PF03780 DK93_RS03905 DK93_RS03910 PF05532 CsbD-like DK93_RS03915 PF03780 DK93_RS03915 DK93_RS03920 PF00392 Bacterial regulatory proteins, gntR family DK93_RS03920 PF02080 TrkA-C domain DK93_RS03925 PF00440 Bacterial regulatory proteins, tetR family DK93_RS03930 PF00005 ABC transporter DK93_RS03935 PF02687 DK93_RS03935 DK93_RS03945 PF06081 DK93_RS03945 DK93_RS03945 PF11728 DUF939 C-terminal domain DK93_RS03950 PF09903 DK93_RS03950 DK93_RS03955 PF01509 TruB family pseudouridylate synthase (N terminal domain) DK93_RS03955 PF16198 DK93_RS03955 DK93_RS03960 PF01687 Riboflavin kinase DK93_RS03960 PF06574 FAD synthetase DK93_RS03965 PF03960 ArsC family DK93_RS03975 PF00459 Inositol monophosphatase family DK93_RS03980 PF01189 NOL1/NOP2/sun family DK93_RS03980 PF13636 pre-rRNA processing and ribosome biogenesis DK93_RS03980 PF17125 DK93_RS03980 DK93_RS03980 PF17126 DK93_RS03980 DK93_RS03985 PF12849 PBP superfamily domain DK93_RS03990 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS04000 PF00005 ABC transporter DK93_RS04005 PF00005 ABC transporter DK93_RS04010 PF01895 PhoU domain DK93_RS04015 PF01433 Peptidase family M1 DK93_RS04015 PF11838 ERAP1-like C-terminal domain DK93_RS04020 PF00072 Response regulator receiver domain DK93_RS04020 PF00486 Transcriptional regulatory protein, C terminal DK93_RS04025 PF00512 His Kinase A (phospho-acceptor) domain DK93_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS04030 PF01649 Ribosomal protein S20 DK93_RS04035 PF00485 Phosphoribulokinase / Uridine kinase family DK93_RS04040 PF05175 Methyltransferase small domain DK93_RS04045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DK93_RS04050 PF02608 Basic membrane protein DK93_RS04055 PF00005 ABC transporter DK93_RS04060 PF02653 DK93_RS04060 DK93_RS04065 PF02653 DK93_RS04065 DK93_RS04070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK93_RS04070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK93_RS04070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK93_RS04070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK93_RS04075 PF12822 Protein of unknown function (DUF3816) DK93_RS04080 PF02441 Flavoprotein DK93_RS04085 PF04127 DNA / pantothenate metabolism flavoprotein DK93_RS04090 PF03099 Biotin/lipoate A/B protein ligase family DK93_RS04095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DK93_RS04100 PF00296 Luciferase-like monooxygenase DK93_RS04105 PF01597 Glycine cleavage H-protein DK93_RS04110 PF01661 Macro domain DK93_RS04120 PF03099 Biotin/lipoate A/B protein ligase family DK93_RS04120 PF10437 Bacterial lipoate protein ligase C-terminus DK93_RS04125 PF01268 Formate--tetrahydrofolate ligase DK93_RS04130 PF13091 PLD-like domain DK93_RS04135 PF03477 ATP cone domain DK93_RS04140 PF00155 Aminotransferase class I and II DK93_RS04140 PF00392 Bacterial regulatory proteins, gntR family DK93_RS04145 PF08543 Phosphomethylpyrimidine kinase DK93_RS04150 PF07155 ECF-type riboflavin transporter, S component DK93_RS04155 PF00005 ABC transporter DK93_RS04155 PF12848 ABC transporter DK93_RS04160 PF02388 FemAB family DK93_RS04165 PF00117 Glutamine amidotransferase class-I DK93_RS04165 PF00958 GMP synthase C terminal domain DK93_RS04165 PF02540 NAD synthase DK93_RS04175 PF00392 Bacterial regulatory proteins, gntR family DK93_RS04175 PF07702 UTRA domain DK93_RS04180 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DK93_RS04185 PF00448 SRP54-type protein, GTPase domain DK93_RS04185 PF02881 SRP54-type protein, helical bundle domain DK93_RS04185 PF02978 Signal peptide binding domain DK93_RS04190 PF00717 Peptidase S24-like DK93_RS04190 PF01381 Helix-turn-helix DK93_RS04195 PF00589 Phage integrase family DK93_RS04195 PF13495 Phage integrase, N-terminal SAM-like domain DK93_RS04205 PF08218 Citrate lyase ligase C-terminal domain DK93_RS04210 PF00682 HMGL-like DK93_RS04210 PF02436 Conserved carboxylase domain DK93_RS04215 PF03802 DK93_RS04215 DK93_RS04220 PF04223 Citrate lyase, alpha subunit (CitF) DK93_RS04225 PF03328 HpcH/HpaI aldolase/citrate lyase family DK93_RS04230 PF06857 DK93_RS04230 DK93_RS04240 PF03977 DK93_RS04240 DK93_RS04245 PF00364 Biotin-requiring enzyme DK93_RS04255 PF03600 Citrate transporter DK93_RS04260 PF00392 Bacterial regulatory proteins, gntR family DK93_RS04260 PF07729 FCD domain DK93_RS04265 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DK93_RS04270 PF03977 DK93_RS04270 DK93_RS04275 PF00364 Biotin-requiring enzyme DK93_RS04280 PF04277 DK93_RS04280 DK93_RS04285 PF00682 HMGL-like DK93_RS04285 PF02436 Conserved carboxylase domain DK93_RS04290 PF01134 Glucose inhibited division protein A DK93_RS04295 PF01131 DNA topoisomerase DK93_RS04295 PF01396 DK93_RS04295 DK93_RS04295 PF01751 Toprim domain DK93_RS04300 PF02481 DNA recombination-mediator protein A DK93_RS04305 PF01351 Ribonuclease HII DK93_RS04310 PF01926 50S ribosome-binding GTPase DK93_RS04315 PF08876 DK93_RS04315 DK93_RS04320 PF03006 DK93_RS04320 DK93_RS04325 PF00781 Diacylglycerol kinase catalytic domain DK93_RS04335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK93_RS04340 PF04203 Sortase family DK93_RS04345 PF00521 DNA gyrase/topoisomerase IV, subunit A DK93_RS04345 PF03989 DNA gyrase C-terminal domain, beta-propeller DK93_RS04350 PF00056 lactate/malate dehydrogenase, NAD binding domain DK93_RS04350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DK93_RS04355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK93_RS04355 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS04360 PF00005 ABC transporter DK93_RS04360 PF00664 ABC transporter transmembrane region DK93_RS04365 PF00005 ABC transporter DK93_RS04365 PF00664 ABC transporter transmembrane region DK93_RS04370 PF13702 Lysozyme-like DK93_RS04375 PF04245 DK93_RS04375 DK93_RS04380 PF00464 Serine hydroxymethyltransferase DK93_RS04385 PF00583 Acetyltransferase (GNAT) family DK93_RS04390 PF01300 Telomere recombination DK93_RS04395 PF05175 Methyltransferase small domain DK93_RS04400 PF00472 RF-1 domain DK93_RS04400 PF03462 PCRF domain DK93_RS04405 PF00265 Thymidine kinase DK93_RS04410 PF01361 Tautomerase enzyme DK93_RS04415 PF02424 ApbE family DK93_RS04420 PF00860 Permease family DK93_RS04425 PF00156 Phosphoribosyl transferase domain DK93_RS04430 PF00478 IMP dehydrogenase / GMP reductase domain DK93_RS04435 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS04435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DK93_RS04440 PF00005 ABC transporter DK93_RS04450 PF00106 short chain dehydrogenase DK93_RS04455 PF01515 Phosphate acetyl/butaryl transferase DK93_RS04460 PF00849 RNA pseudouridylate synthase DK93_RS04465 PF01513 ATP-NAD kinase DK93_RS04470 PF04607 Region found in RelA / SpoT proteins DK93_RS04475 PF01928 CYTH domain DK93_RS04480 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DK93_RS04480 PF14572 Phosphoribosyl synthetase-associated domain DK93_RS04485 PF00266 Aminotransferase class-V DK93_RS04490 PF08866 Putative amino acid metabolism DK93_RS04495 PF02629 CoA binding domain DK93_RS04495 PF06971 Putative DNA-binding protein N-terminus DK93_RS04500 PF07722 Peptidase C26 DK93_RS04505 PF04002 RadC-like JAB domain DK93_RS04510 PF01594 DK93_RS04510 DK93_RS04515 PF13472 GDSL-like Lipase/Acylhydrolase family DK93_RS04520 PF00654 Voltage gated chloride channel DK93_RS04525 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DK93_RS04535 PF00390 Malic enzyme, N-terminal domain DK93_RS04535 PF03949 Malic enzyme, NAD binding domain DK93_RS04540 PF03390 DK93_RS04540 DK93_RS04545 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DK93_RS04545 PF17203 DK93_RS04545 DK93_RS04550 PF00072 Response regulator receiver domain DK93_RS04555 PF13416 Bacterial extracellular solute-binding protein DK93_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS04565 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS04570 PF00005 ABC transporter DK93_RS04575 PF01565 FAD binding domain DK93_RS04575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DK93_RS04580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DK93_RS04585 PF02152 Dihydroneopterin aldolase DK93_RS04590 PF00809 Pterin binding enzyme DK93_RS04595 PF01227 GTP cyclohydrolase I DK93_RS04600 PF08245 Mur ligase middle domain DK93_RS04605 PF01522 Polysaccharide deacetylase DK93_RS04610 PF00768 D-alanyl-D-alanine carboxypeptidase DK93_RS04610 PF07943 Penicillin-binding protein 5, C-terminal domain DK93_RS04615 PF00542 Ribosomal protein L7/L12 C-terminal domain DK93_RS04615 PF16320 DK93_RS04615 DK93_RS04620 PF00466 Ribosomal protein L10 DK93_RS04625 PF01926 50S ribosome-binding GTPase DK93_RS04625 PF10396 GTP-binding protein TrmE N-terminus DK93_RS04625 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE DK93_RS04630 PF01546 Peptidase family M20/M25/M40 DK93_RS04635 PF00881 Nitroreductase family DK93_RS04640 PF01541 GIY-YIG catalytic domain DK93_RS04640 PF02151 UvrB/uvrC motif DK93_RS04640 PF08459 UvrC Helix-hairpin-helix N-terminal DK93_RS04645 PF00171 Aldehyde dehydrogenase family DK93_RS04650 PF13343 Bacterial extracellular solute-binding protein DK93_RS04655 PF00072 Response regulator receiver domain DK93_RS04655 PF12833 Helix-turn-helix domain DK93_RS04660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS04660 PF06580 DK93_RS04660 DK93_RS04665 PF03613 DK93_RS04665 DK93_RS04670 PF03609 DK93_RS04670 DK93_RS04675 PF03830 PTS system sorbose subfamily IIB component DK93_RS04680 PF03610 PTS system fructose IIA component DK93_RS04685 PF03601 DK93_RS04685 DK93_RS04690 PF01641 SelR domain DK93_RS04695 PF00746 DK93_RS04695 DK93_RS04695 PF01391 Collagen triple helix repeat (20 copies) DK93_RS04700 PF00009 Elongation factor Tu GTP binding domain DK93_RS04700 PF00679 Elongation factor G C-terminus DK93_RS04700 PF03144 Elongation factor Tu domain 2 DK93_RS04700 PF06421 GTP-binding protein LepA C-terminus DK93_RS04700 PF14492 Elongation Factor G, domain II DK93_RS04705 PF09711 CRISPR-associated protein (Cas_Csn2) DK93_RS04710 PF09827 CRISPR associated protein Cas2 DK93_RS04715 PF01867 CRISPR associated protein Cas1 DK93_RS04720 PF13395 HNH endonuclease DK93_RS04720 PF16592 DK93_RS04720 DK93_RS04720 PF16593 DK93_RS04720 DK93_RS04720 PF16595 DK93_RS04720 DK93_RS04725 PF07314 DK93_RS04725 DK93_RS04730 PF13242 HAD-hyrolase-like DK93_RS04730 PF13344 Haloacid dehalogenase-like hydrolase DK93_RS04735 PF01643 Acyl-ACP thioesterase DK93_RS04740 PF04055 Radical SAM superfamily DK93_RS04740 PF06969 HemN C-terminal domain DK93_RS04750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK93_RS04750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK93_RS04750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK93_RS04750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK93_RS04755 PF07949 YbbR-like protein DK93_RS04760 PF02457 DisA bacterial checkpoint controller nucleotide-binding DK93_RS04765 PF08245 Mur ligase middle domain DK93_RS04765 PF08353 DK93_RS04765 DK93_RS04770 PF07685 CobB/CobQ-like glutamine amidotransferase domain DK93_RS04775 PF03099 Biotin/lipoate A/B protein ligase family DK93_RS04775 PF10437 Bacterial lipoate protein ligase C-terminus DK93_RS04785 PF00364 Biotin-requiring enzyme DK93_RS04785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK93_RS04785 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS04795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DK93_RS04795 PF00364 Biotin-requiring enzyme DK93_RS04795 PF02817 e3 binding domain DK93_RS04800 PF02779 Transketolase, pyrimidine binding domain DK93_RS04800 PF02780 Transketolase, C-terminal domain DK93_RS04805 PF00676 Dehydrogenase E1 component DK93_RS04810 PF00005 ABC transporter DK93_RS04810 PF12848 ABC transporter DK93_RS04820 PF00756 Putative esterase DK93_RS04825 PF00753 Metallo-beta-lactamase superfamily DK93_RS04825 PF07521 RNA-metabolising metallo-beta-lactamase DK93_RS04830 PF00005 ABC transporter DK93_RS04835 PF02653 DK93_RS04835 DK93_RS04845 PF04392 ABC transporter substrate binding protein DK93_RS04850 PF05670 DK93_RS04850 DK93_RS04850 PF05833 Fibronectin-binding protein A N-terminus (FbpA) DK93_RS04855 PF13181 Tetratricopeptide repeat DK93_RS04860 PF01594 DK93_RS04860 DK93_RS04865 PF00293 NUDIX domain DK93_RS04870 PF16363 DK93_RS04870 DK93_RS04875 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DK93_RS04880 PF00483 Nucleotidyl transferase DK93_RS04885 PF01266 FAD dependent oxidoreductase DK93_RS04890 PF01784 NIF3 (NGG1p interacting factor 3) DK93_RS04895 PF04816 Family of unknown function (DUF633) DK93_RS04900 PF00633 Helix-hairpin-helix motif DK93_RS04900 PF00730 HhH-GPD superfamily base excision DNA repair protein DK93_RS04900 PF10576 Iron-sulfur binding domain of endonuclease III DK93_RS04905 PF07261 Replication initiation and membrane attachment DK93_RS04910 PF00156 Phosphoribosyl transferase domain DK93_RS04915 PF01368 DHH family DK93_RS04915 PF02272 DHHA1 domain DK93_RS04915 PF10141 DK93_RS04915 DK93_RS04920 PF00106 short chain dehydrogenase DK93_RS04925 PF00753 Metallo-beta-lactamase superfamily DK93_RS04925 PF12706 Beta-lactamase superfamily domain DK93_RS04935 PF01926 50S ribosome-binding GTPase DK93_RS04935 PF13167 DK93_RS04935 DK93_RS04935 PF16360 DK93_RS04935 DK93_RS04940 PF01715 IPP transferase DK93_RS04945 PF03595 Voltage-dependent anion channel DK93_RS04950 PF00043 Glutathione S-transferase, C-terminal domain DK93_RS04955 PF00581 Rhodanese-like domain DK93_RS04955 PF12368 DK93_RS04955 DK93_RS04970 PF00575 S1 RNA binding domain DK93_RS04985 PF11184 DK93_RS04985 DK93_RS04990 PF01063 Aminotransferase class IV DK93_RS04995 PF00521 DNA gyrase/topoisomerase IV, subunit A DK93_RS04995 PF03989 DNA gyrase C-terminal domain, beta-propeller DK93_RS05000 PF00204 DNA gyrase B DK93_RS05000 PF00986 DNA gyrase B subunit, carboxyl terminus DK93_RS05000 PF01751 Toprim domain DK93_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS05005 PF02660 DK93_RS05005 DK93_RS05010 PF01979 Amidohydrolase family DK93_RS05015 PF03167 Uracil DNA glycosylase superfamily DK93_RS05020 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS05025 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK93_RS05030 PF01425 Amidase DK93_RS05035 PF00156 Phosphoribosyl transferase domain DK93_RS05040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK93_RS05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK93_RS05050 PF03466 LysR substrate binding domain DK93_RS05055 PF09659 DK93_RS05055 DK93_RS05060 PF01048 Phosphorylase superfamily DK93_RS05065 PF01048 Phosphorylase superfamily DK93_RS05070 PF03960 ArsC family DK93_RS05075 PF01676 Metalloenzyme superfamily DK93_RS05080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DK93_RS05085 PF00004 ATPase family associated with various cellular activities (AAA) DK93_RS05085 PF07724 AAA domain (Cdc48 subfamily) DK93_RS05085 PF10431 C-terminal, D2-small domain, of ClpB protein DK93_RS05095 PF01926 50S ribosome-binding GTPase DK93_RS05100 PF06689 ClpX C4-type zinc finger DK93_RS05100 PF07724 AAA domain (Cdc48 subfamily) DK93_RS05100 PF10431 C-terminal, D2-small domain, of ClpB protein DK93_RS05110 PF00186 Dihydrofolate reductase DK93_RS05115 PF00303 Thymidylate synthase DK93_RS05120 PF00195 Chalcone and stilbene synthases, N-terminal domain DK93_RS05120 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DK93_RS05125 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DK93_RS05130 PF01070 FMN-dependent dehydrogenase DK93_RS05135 PF00288 GHMP kinases N terminal domain DK93_RS05135 PF08544 GHMP kinases C terminal DK93_RS05140 PF00288 GHMP kinases N terminal domain DK93_RS05140 PF08544 GHMP kinases C terminal DK93_RS05145 PF00288 GHMP kinases N terminal domain DK93_RS05145 PF08544 GHMP kinases C terminal DK93_RS05150 PF00512 His Kinase A (phospho-acceptor) domain DK93_RS05150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS05155 PF00072 Response regulator receiver domain DK93_RS05155 PF00486 Transcriptional regulatory protein, C terminal DK93_RS05160 PF04607 Region found in RelA / SpoT proteins DK93_RS05165 PF00149 Calcineurin-like phosphoesterase DK93_RS05165 PF02872 5'-nucleotidase, C-terminal domain DK93_RS05170 PF01327 Polypeptide deformylase DK93_RS05180 PF00005 ABC transporter DK93_RS05180 PF12848 ABC transporter DK93_RS05180 PF16326 DK93_RS05180 DK93_RS05185 PF01743 Poly A polymerase head domain DK93_RS05185 PF12627 Probable RNA and SrmB- binding site of polymerase A DK93_RS05185 PF13735 tRNA nucleotidyltransferase domain 2 putative DK93_RS05190 PF02645 Uncharacterised protein, DegV family COG1307 DK93_RS05195 PF06619 Protein of unknown function (DUF1149) DK93_RS05205 PF09028 Mac 1 DK93_RS05210 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK93_RS05220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK93_RS05225 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK93_RS05230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK93_RS05230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS05230 PF02378 Phosphotransferase system, EIIC DK93_RS05235 PF00294 pfkB family carbohydrate kinase DK93_RS05240 PF00455 DK93_RS05240 DK93_RS05240 PF08220 DeoR-like helix-turn-helix domain DK93_RS05245 PF02558 Ketopantoate reductase PanE/ApbA DK93_RS05245 PF08546 Ketopantoate reductase PanE/ApbA C terminal DK93_RS05250 PF13303 DK93_RS05250 DK93_RS05255 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS05260 PF01746 tRNA (Guanine-1)-methyltransferase DK93_RS05265 PF01782 RimM N-terminal domain DK93_RS05265 PF05239 PRC-barrel domain DK93_RS05270 PF00440 Bacterial regulatory proteins, tetR family DK93_RS05270 PF14278 DK93_RS05270 DK93_RS05275 PF01545 Cation efflux family DK93_RS05280 PF01243 Pyridoxamine 5'-phosphate oxidase DK93_RS05285 PF13306 Leucine rich repeats (6 copies) DK93_RS05290 PF13083 KH domain DK93_RS05295 PF00886 Ribosomal protein S16 DK93_RS05300 PF03009 Glycerophosphoryl diester phosphodiesterase family DK93_RS05300 PF10110 DK93_RS05300 DK93_RS05305 PF02687 DK93_RS05305 DK93_RS05305 PF12704 MacB-like periplasmic core domain DK93_RS05310 PF00005 ABC transporter DK93_RS05315 PF16576 DK93_RS05315 DK93_RS05320 PF02142 MGS-like domain DK93_RS05320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DK93_RS05320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK93_RS05325 PF00117 Glutamine amidotransferase class-I DK93_RS05325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DK93_RS05330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK93_RS05330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK93_RS05335 PF00860 Permease family DK93_RS05340 PF00156 Phosphoribosyl transferase domain DK93_RS05345 PF00849 RNA pseudouridylate synthase DK93_RS05345 PF01479 S4 domain DK93_RS05350 PF01252 DK93_RS05350 DK93_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK93_RS05355 PF03466 LysR substrate binding domain DK93_RS05360 PF01016 Ribosomal L27 protein DK93_RS05365 PF04327 Protein of unknown function (DUF464) DK93_RS05370 PF00829 Ribosomal prokaryotic L21 protein DK93_RS05375 PF09587 Bacterial capsule synthesis protein PGA_cap DK93_RS05380 PF02568 Thiamine biosynthesis protein (ThiI) DK93_RS05380 PF02926 THUMP domain DK93_RS05385 PF00266 Aminotransferase class-V DK93_RS05395 PF08245 Mur ligase middle domain DK93_RS05400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK93_RS05400 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS05405 PF06133 Protein of unknown function (DUF964) DK93_RS05410 PF01264 Chorismate synthase DK93_RS05415 PF01487 Type I 3-dehydroquinase DK93_RS05420 PF10672 S-adenosylmethionine-dependent methyltransferase DK93_RS05425 PF00884 Sulfatase DK93_RS05430 PF00453 Ribosomal protein L20 DK93_RS05435 PF01632 Ribosomal protein L35 DK93_RS05440 PF00707 Translation initiation factor IF-3, C-terminal domain DK93_RS05440 PF05198 Translation initiation factor IF-3, N-terminal domain DK93_RS05445 PF02224 Cytidylate kinase DK93_RS05455 PF13459 4Fe-4S single cluster domain DK93_RS05465 PF01546 Peptidase family M20/M25/M40 DK93_RS05465 PF07687 Peptidase dimerisation domain DK93_RS05470 PF09913 DK93_RS05470 DK93_RS05480 PF10066 DK93_RS05480 DK93_RS05485 PF00535 Glycosyl transferase family 2 DK93_RS05490 PF00884 Sulfatase DK93_RS05495 PF05045 DK93_RS05495 DK93_RS05500 PF00535 Glycosyl transferase family 2 DK93_RS05505 PF00005 ABC transporter DK93_RS05510 PF01061 DK93_RS05510 DK93_RS05515 PF00535 Glycosyl transferase family 2 DK93_RS05520 PF09314 DK93_RS05520 DK93_RS05525 PF04321 RmlD substrate binding domain DK93_RS05530 PF01883 Domain of unknown function DUF59 DK93_RS05535 PF00140 Sigma-70 factor, region 1 DK93_RS05535 PF03979 Sigma-70 factor, region 1 DK93_RS05535 PF04539 Sigma-70 region 3 DK93_RS05535 PF04542 Sigma-70 region 2 DK93_RS05535 PF04545 Sigma-70, region 4 DK93_RS05540 PF01807 CHC2 zinc finger DK93_RS05540 PF08275 DNA primase catalytic core, N-terminal domain DK93_RS05540 PF10410 DnaB-helicase binding domain of primase DK93_RS05540 PF13155 Toprim-like DK93_RS05545 PF01741 Large-conductance mechanosensitive channel, MscL DK93_RS05550 PF01165 Ribosomal protein S21 DK93_RS05555 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK93_RS05560 PF00580 UvrD/REP helicase N-terminal domain DK93_RS05560 PF12705 PD-(D/E)XK nuclease superfamily DK93_RS05560 PF13361 UvrD-like helicase C-terminal domain DK93_RS05565 PF12705 PD-(D/E)XK nuclease superfamily DK93_RS05570 PF04228 DK93_RS05570 DK93_RS05575 PF00005 ABC transporter DK93_RS05580 PF02687 DK93_RS05580 DK93_RS05585 PF08349 DK93_RS05585 DK93_RS05590 PF02566 OsmC-like protein DK93_RS05595 PF01588 Putative tRNA binding domain DK93_RS05595 PF03147 Ferredoxin-fold anticodon binding domain DK93_RS05595 PF03483 B3/4 domain DK93_RS05595 PF03484 tRNA synthetase B5 domain DK93_RS05600 PF01409 tRNA synthetases class II core domain (F) DK93_RS05600 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DK93_RS05610 PF11772 DK93_RS05610 DK93_RS05615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK93_RS05620 PF06612 DK93_RS05620 DK93_RS05625 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DK93_RS05625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DK93_RS05630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK93_RS05630 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK93_RS05635 PF00231 ATP synthase DK93_RS05640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK93_RS05640 PF00306 ATP synthase alpha/beta chain, C terminal domain DK93_RS05640 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK93_RS05645 PF00213 ATP synthase delta (OSCP) subunit DK93_RS05650 PF00430 ATP synthase B/B' CF(0) DK93_RS05655 PF00119 ATP synthase A chain DK93_RS05660 PF00137 ATP synthase subunit C DK93_RS05665 PF00781 Diacylglycerol kinase catalytic domain DK93_RS05670 PF00533 BRCA1 C Terminus (BRCT) domain DK93_RS05670 PF01653 NAD-dependent DNA ligase adenylation domain DK93_RS05670 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DK93_RS05670 PF03120 NAD-dependent DNA ligase OB-fold domain DK93_RS05670 PF12826 Helix-hairpin-helix motif DK93_RS05670 PF14520 Helix-hairpin-helix domain DK93_RS05675 PF06177 DK93_RS05675 DK93_RS05680 PF03372 Endonuclease/Exonuclease/phosphatase family DK93_RS05685 PF12698 ABC-2 family transporter protein DK93_RS05690 PF12698 ABC-2 family transporter protein DK93_RS05695 PF00005 ABC transporter DK93_RS05705 PF02517 CAAX protease self-immunity DK93_RS05710 PF02624 YcaO-like family DK93_RS05720 PF00881 Nitroreductase family DK93_RS05730 PF00113 Enolase, C-terminal TIM barrel domain DK93_RS05730 PF03952 Enolase, N-terminal domain DK93_RS05735 PF07997 Protein of unknown function (DUF1694) DK93_RS05740 PF06160 DK93_RS05740 DK93_RS05745 PF00204 DNA gyrase B DK93_RS05745 PF00986 DNA gyrase B subunit, carboxyl terminus DK93_RS05745 PF01751 Toprim domain DK93_RS05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS05750 PF13419 Haloacid dehalogenase-like hydrolase DK93_RS05760 PF01245 Ribosomal protein L19 DK93_RS05765 PF00654 Voltage gated chloride channel DK93_RS05770 PF01817 Chorismate mutase type II DK93_RS05775 PF00258 Flavodoxin DK93_RS05780 PF01368 DHH family DK93_RS05780 PF02272 DHHA1 domain DK93_RS05785 PF01197 Ribosomal protein L31 DK93_RS05790 PF01380 SIS domain DK93_RS05795 PF00392 Bacterial regulatory proteins, gntR family DK93_RS05795 PF07702 UTRA domain DK93_RS05800 PF01297 Periplasmic solute binding protein family DK93_RS05800 PF09223 YodA lipocalin-like domain DK93_RS05805 PF03577 DK93_RS05805 DK93_RS05810 PF02650 WhiA C-terminal HTH domain DK93_RS05810 PF10298 WhiA N-terminal LAGLIDADG-like domain DK93_RS05810 PF14527 WhiA LAGLIDADG-like domain DK93_RS05815 PF01933 Uncharacterised protein family UPF0052 DK93_RS05820 PF03668 DK93_RS05820 DK93_RS05825 PF00152 tRNA synthetases class II (D, K and N) DK93_RS05825 PF01336 OB-fold nucleic acid binding domain DK93_RS05830 PF00155 Aminotransferase class I and II DK93_RS05835 PF00270 DEAD/DEAH box helicase DK93_RS05835 PF00929 Exonuclease DK93_RS05835 PF13307 Helicase C-terminal domain DK93_RS05845 PF01609 Transposase DDE domain DK93_RS05850 PF01609 Transposase DDE domain DK93_RS05850 PF13808 DK93_RS05850 DK93_RS05855 PF13561 Enoyl-(Acyl carrier protein) reductase DK93_RS05860 PF00753 Metallo-beta-lactamase superfamily DK93_RS05865 PF02687 DK93_RS05865 DK93_RS05870 PF00005 ABC transporter DK93_RS05875 PF00472 RF-1 domain DK93_RS05875 PF03462 PCRF domain DK93_RS05885 PF13419 Haloacid dehalogenase-like hydrolase DK93_RS05890 PF01081 KDPG and KHG aldolase DK93_RS05895 PF00294 pfkB family carbohydrate kinase DK93_RS05900 PF02502 Ribose/Galactose Isomerase DK93_RS05900 PF12408 Ribose-5-phosphate isomerase DK93_RS05905 PF13561 Enoyl-(Acyl carrier protein) reductase DK93_RS05910 PF03610 PTS system fructose IIA component DK93_RS05915 PF07470 Glycosyl Hydrolase Family 88 DK93_RS05920 PF03830 PTS system sorbose subfamily IIB component DK93_RS05925 PF03609 DK93_RS05925 DK93_RS05930 PF03613 DK93_RS05930 DK93_RS05935 PF07940 Heparinase II/III-like protein DK93_RS05935 PF16889 DK93_RS05935 DK93_RS05940 PF00356 Bacterial regulatory proteins, lacI family DK93_RS05940 PF13407 Periplasmic binding protein domain DK93_RS05945 PF00122 E1-E2 ATPase DK93_RS05945 PF00689 Cation transporting ATPase, C-terminus DK93_RS05945 PF00690 Cation transporter/ATPase, N-terminus DK93_RS05945 PF00702 haloacid dehalogenase-like hydrolase DK93_RS05950 PF09148 Domain of unknown function (DUF1934) DK93_RS05955 PF01966 HD domain DK93_RS05965 PF08282 haloacid dehalogenase-like hydrolase DK93_RS05970 PF02388 FemAB family DK93_RS05975 PF02388 FemAB family DK93_RS05980 PF00121 Triosephosphate isomerase DK93_RS05985 PF00009 Elongation factor Tu GTP binding domain DK93_RS05985 PF03143 Elongation factor Tu C-terminal domain DK93_RS05985 PF03144 Elongation factor Tu domain 2 DK93_RS05990 PF01098 DK93_RS05990 DK93_RS05995 PF00311 Phosphoenolpyruvate carboxylase DK93_RS06000 PF01432 Peptidase family M3 DK93_RS06000 PF08439 Oligopeptidase F DK93_RS06005 PF00255 Glutathione peroxidase DK93_RS06010 PF14478 Domain of unknown function (DUF4430) DK93_RS06015 PF07155 ECF-type riboflavin transporter, S component DK93_RS06020 PF01183 Glycosyl hydrolases family 25 DK93_RS06025 PF09515 Thiamine transporter protein (Thia_YuaJ) DK93_RS06030 PF04073 Aminoacyl-tRNA editing domain DK93_RS06035 PF00300 Histidine phosphatase superfamily (branch 1) DK93_RS06040 PF13419 Haloacid dehalogenase-like hydrolase DK93_RS06045 PF00152 tRNA synthetases class II (D, K and N) DK93_RS06045 PF01336 OB-fold nucleic acid binding domain DK93_RS06055 PF02229 Transcriptional Coactivator p15 (PC4) DK93_RS06060 PF01136 DK93_RS06060 DK93_RS06060 PF16325 DK93_RS06060 DK93_RS06065 PF01136 DK93_RS06065 DK93_RS06070 PF11674 DK93_RS06070 DK93_RS06075 PF12732 DK93_RS06075 DK93_RS06080 PF06103 DK93_RS06080 DK93_RS06085 PF01790 DK93_RS06085 DK93_RS06090 PF02603 HPr Serine kinase N terminus DK93_RS06090 PF07475 HPr Serine kinase C-terminal domain DK93_RS06095 PF04024 DK93_RS06095 DK93_RS06100 PF10263 DK93_RS06100 DK93_RS06105 PF00575 S1 RNA binding domain DK93_RS06105 PF09371 Tex-like protein N-terminal domain DK93_RS06105 PF12836 Helix-hairpin-helix motif DK93_RS06105 PF16921 DK93_RS06105 DK93_RS06115 PF03773 DK93_RS06115 DK93_RS06120 PF09323 DK93_RS06120 DK93_RS06125 PF00232 Glycosyl hydrolase family 1 DK93_RS06130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK93_RS06130 PF00367 phosphotransferase system, EIIB DK93_RS06130 PF02378 Phosphotransferase system, EIIC DK93_RS06135 PF00874 PRD domain DK93_RS06135 PF03123 CAT RNA binding domain DK93_RS06140 PF07690 Major Facilitator Superfamily DK93_RS06145 PF00448 SRP54-type protein, GTPase domain DK93_RS06145 PF02881 SRP54-type protein, helical bundle domain DK93_RS06150 PF08282 haloacid dehalogenase-like hydrolase DK93_RS06155 PF08282 haloacid dehalogenase-like hydrolase DK93_RS06160 PF01527 Transposase DK93_RS06165 PF00665 Integrase core domain DK93_RS06165 PF13276 DK93_RS06165 DK93_RS06185 PF05016 Plasmid stabilisation system protein DK93_RS06190 PF04221 RelB antitoxin DK93_RS06205 PF10088 DK93_RS06205 DK93_RS06210 PF13443 Cro/C1-type HTH DNA-binding domain DK93_RS06215 PF07690 Major Facilitator Superfamily DK93_RS06220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DK93_RS06220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DK93_RS06220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DK93_RS06230 PF00535 Glycosyl transferase family 2 DK93_RS06240 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) DK93_RS06250 PF01996 F420-0:Gamma-glutamyl ligase DK93_RS06255 PF01261 Xylose isomerase-like TIM barrel DK93_RS06260 PF08501 Shikimate dehydrogenase substrate binding domain DK93_RS06270 PF02463 RecF/RecN/SMC N terminal domain DK93_RS06270 PF06470 SMC proteins Flexible Hinge Domain DK93_RS06275 PF00035 Double-stranded RNA binding motif DK93_RS06275 PF14622 Ribonuclease-III-like DK93_RS06280 PF00753 Metallo-beta-lactamase superfamily DK93_RS06285 PF00512 His Kinase A (phospho-acceptor) domain DK93_RS06285 PF00989 PAS fold DK93_RS06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS06290 PF00072 Response regulator receiver domain DK93_RS06290 PF00486 Transcriptional regulatory protein, C terminal DK93_RS06295 PF11311 DK93_RS06295 DK93_RS06300 PF00501 AMP-binding enzyme DK93_RS06305 PF00108 Thiolase, N-terminal domain DK93_RS06305 PF02803 Thiolase, C-terminal domain DK93_RS06315 PF06182 DK93_RS06315 DK93_RS06320 PF06182 DK93_RS06320 DK93_RS06325 PF00005 ABC transporter DK93_RS06330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK93_RS06330 PF02824 TGS domain DK93_RS06330 PF03129 Anticodon binding domain DK93_RS06330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DK93_RS06335 PF00534 Glycosyl transferases group 1 DK93_RS06335 PF13439 Glycosyltransferase Family 4 DK93_RS06340 PF00534 Glycosyl transferases group 1 DK93_RS06340 PF13439 Glycosyltransferase Family 4 DK93_RS06345 PF00356 Bacterial regulatory proteins, lacI family DK93_RS06345 PF13377 Periplasmic binding protein-like domain DK93_RS06350 PF00557 Metallopeptidase family M24 DK93_RS06350 PF01321 Creatinase/Prolidase N-terminal domain DK93_RS06355 PF00881 Nitroreductase family DK93_RS06360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK93_RS06365 PF00535 Glycosyl transferase family 2 DK93_RS06370 PF06149 DK93_RS06370 DK93_RS06375 PF06166 DK93_RS06375 DK93_RS06380 PF01470 Pyroglutamyl peptidase DK93_RS06385 PF05096 Glutamine cyclotransferase DK93_RS06390 PF01668 SmpB protein DK93_RS06395 PF00575 S1 RNA binding domain DK93_RS06395 PF00773 RNB domain DK93_RS06395 PF08206 Ribonuclease B OB domain DK93_RS06400 PF03840 Preprotein translocase SecG subunit DK93_RS06405 PF07690 Major Facilitator Superfamily DK93_RS06410 PF05872 DK93_RS06410 DK93_RS06415 PF01121 Dephospho-CoA kinase DK93_RS06420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DK93_RS06420 PF06827 Zinc finger found in FPG and IleRS DK93_RS06420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DK93_RS06425 PF01381 Helix-turn-helix DK93_RS06470 PF10439 DK93_RS06470 DK93_RS06475 PF00872 DK93_RS06475 DK93_RS06480 PF10439 DK93_RS06480 DK93_RS06485 PF10439 DK93_RS06485 DK93_RS06490 PF00293 NUDIX domain DK93_RS06495 PF01926 50S ribosome-binding GTPase DK93_RS06495 PF07650 KH domain DK93_RS06500 PF01219 Prokaryotic diacylglycerol kinase DK93_RS06505 PF02130 Uncharacterized protein family UPF0054 DK93_RS06510 PF03167 Uracil DNA glycosylase superfamily DK93_RS06515 PF02562 PhoH-like protein DK93_RS06520 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family DK93_RS06525 PF01476 LysM domain DK93_RS06530 PF06855 Protein of unknown function (DUF1250) DK93_RS06535 PF01625 Peptide methionine sulfoxide reductase DK93_RS06540 PF13509 S1 domain DK93_RS06545 PF01765 Ribosome recycling factor DK93_RS06550 PF00696 Amino acid kinase family DK93_RS06555 PF00687 Ribosomal protein L1p/L10e family DK93_RS06560 PF00298 Ribosomal protein L11, RNA binding domain DK93_RS06560 PF03946 Ribosomal protein L11, N-terminal domain DK93_RS06565 PF11877 DK93_RS06565 DK93_RS06570 PF01580 FtsK/SpoIIIE family DK93_RS06570 PF09397 Ftsk gamma domain DK93_RS06575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DK93_RS06580 PF00950 DK93_RS06580 DK93_RS06585 PF00005 ABC transporter DK93_RS06590 PF01297 Periplasmic solute binding protein family DK93_RS06595 PF01325 Iron dependent repressor, N-terminal DNA binding domain DK93_RS06595 PF02742 Iron dependent repressor, metal binding and dimerisation domain DK93_RS06595 PF04023 FeoA domain DK93_RS06605 PF01048 Phosphorylase superfamily DK93_RS06615 PF00293 NUDIX domain DK93_RS06620 PF00132 Bacterial transferase hexapeptide (six repeats) DK93_RS06620 PF12804 MobA-like NTP transferase domain DK93_RS06620 PF14602 Hexapeptide repeat of succinyl-transferase DK93_RS06625 PF07690 Major Facilitator Superfamily DK93_RS06630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK93_RS06630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DK93_RS06635 PF13561 Enoyl-(Acyl carrier protein) reductase DK93_RS06640 PF11195 DK93_RS06640 DK93_RS06660 PF03496 ADP-ribosyltransferase exoenzyme DK93_RS06665 PF00317 Ribonucleotide reductase, all-alpha domain DK93_RS06665 PF02867 Ribonucleotide reductase, barrel domain DK93_RS06665 PF08343 Ribonucleotide reductase N-terminal DK93_RS06670 PF07972 NrdI Flavodoxin like DK93_RS06675 PF00268 Ribonucleotide reductase, small chain DK93_RS06680 PF01588 Putative tRNA binding domain DK93_RS06680 PF09334 tRNA synthetases class I (M) DK93_RS06685 PF06912 DK93_RS06685 DK93_RS06695 PF00082 Subtilase family DK93_RS06695 PF02225 PA domain DK93_RS06695 PF04650 DK93_RS06695 DK93_RS06695 PF06280 Fn3-like domain (DUF1034) DK93_RS06700 PF01070 FMN-dependent dehydrogenase DK93_RS06710 PF03372 Endonuclease/Exonuclease/phosphatase family DK93_RS06715 PF03960 ArsC family DK93_RS06720 PF03932 CutC family DK93_RS06730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DK93_RS06735 PF06156 DK93_RS06735 DK93_RS06740 PF13177 DNA polymerase III, delta subunit DK93_RS06745 PF02223 Thymidylate kinase DK93_RS06750 PF09902 DK93_RS06750 DK93_RS06755 PF00574 Clp protease DK93_RS06760 PF14681 Uracil phosphoribosyltransferase DK93_RS06765 PF01943 DK93_RS06765 DK93_RS06765 PF14667 Polysaccharide biosynthesis C-terminal domain DK93_RS06770 PF02875 Mur ligase family, glutamate ligase domain DK93_RS06770 PF08245 Mur ligase middle domain DK93_RS06775 PF00005 ABC transporter DK93_RS06780 PF01497 Periplasmic binding protein DK93_RS06785 PF01032 FecCD transport family DK93_RS06790 PF01032 FecCD transport family DK93_RS06795 PF08820 DK93_RS06795 DK93_RS06800 PF01368 DHH family DK93_RS06800 PF02833 DHHA2 domain DK93_RS06805 PF04055 Radical SAM superfamily DK93_RS06805 PF13353 4Fe-4S single cluster domain DK93_RS06810 PF00571 CBS domain DK93_RS06810 PF01595 DK93_RS06810 DK93_RS06810 PF03471 Transporter associated domain DK93_RS06815 PF06962 Putative rRNA methylase DK93_RS06820 PF04055 Radical SAM superfamily DK93_RS06820 PF16199 DK93_RS06820 DK93_RS06825 PF01569 PAP2 superfamily DK93_RS06830 PF12822 Protein of unknown function (DUF3816) DK93_RS06835 PF00588 SpoU rRNA Methylase family DK93_RS06840 PF01809 DK93_RS06840 DK93_RS06845 PF00849 RNA pseudouridylate synthase DK93_RS06845 PF01479 S4 domain DK93_RS06850 PF04079 Putative transcriptional regulators (Ypuh-like) DK93_RS06855 PF02616 ScpA/B protein DK93_RS06860 PF00589 Phage integrase family DK93_RS06865 PF00571 CBS domain DK93_RS06870 PF12850 Calcineurin-like phosphoesterase superfamily domain DK93_RS06875 PF01725 Ham1 family DK93_RS06880 PF01177 Asp/Glu/Hydantoin racemase DK93_RS06885 PF03672 DK93_RS06885 DK93_RS06890 PF01027 Inhibitor of apoptosis-promoting Bax1 DK93_RS06900 PF00588 SpoU rRNA Methylase family DK93_RS06900 PF08032 RNA 2'-O ribose methyltransferase substrate binding DK93_RS06905 PF00708 Acylphosphatase DK93_RS06910 PF02096 60Kd inner membrane protein DK93_RS06915 PF01272 Transcription elongation factor, GreA/GreB, C-term DK93_RS06915 PF03449 Transcription elongation factor, N-terminal DK93_RS06920 PF02618 YceG-like family DK93_RS06925 PF13673 Acetyltransferase (GNAT) domain DK93_RS06930 PF01225 Mur ligase family, catalytic domain DK93_RS06930 PF02875 Mur ligase family, glutamate ligase domain DK93_RS06930 PF08245 Mur ligase middle domain DK93_RS06940 PF00176 SNF2 family N-terminal domain DK93_RS06940 PF00271 Helicase conserved C-terminal domain DK93_RS06940 PF04434 DK93_RS06940 DK93_RS06940 PF08455 DK93_RS06940 DK93_RS06945 PF01926 50S ribosome-binding GTPase DK93_RS06945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DK93_RS06950 PF01695 IstB-like ATP binding protein DK93_RS06950 PF07319 Primosomal protein DnaI N-terminus DK93_RS06955 PF07261 Replication initiation and membrane attachment DK93_RS06960 PF03477 ATP cone domain DK93_RS06965 PF00512 His Kinase A (phospho-acceptor) domain DK93_RS06965 PF00672 HAMP domain DK93_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS06970 PF00072 Response regulator receiver domain DK93_RS06970 PF00486 Transcriptional regulatory protein, C terminal DK93_RS06975 PF02620 DK93_RS06975 DK93_RS06980 PF01435 Peptidase family M48 DK93_RS06985 PF04011 LemA family DK93_RS06990 PF02527 rRNA small subunit methyltransferase G DK93_RS06995 PF02386 Cation transport protein DK93_RS07000 PF02254 TrkA-N domain DK93_RS07005 PF00375 Sodium:dicarboxylate symporter family DK93_RS07010 PF05525 DK93_RS07010 DK93_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS07020 PF00005 ABC transporter DK93_RS07020 PF09383 NIL domain DK93_RS07025 PF03180 NLPA lipoprotein DK93_RS07030 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK93_RS07035 PF01709 Transcriptional regulator DK93_RS07040 PF05636 HIGH Nucleotidyl Transferase DK93_RS07045 PF13649 Methyltransferase domain DK93_RS07050 PF02410 Oligomerisation domain DK93_RS07055 PF01966 HD domain DK93_RS07060 PF01467 Cytidylyltransferase DK93_RS07065 PF01985 CRS1 / YhbY (CRM) domain DK93_RS07070 PF01926 50S ribosome-binding GTPase DK93_RS07075 PF13419 Haloacid dehalogenase-like hydrolase DK93_RS07085 PF01609 Transposase DDE domain DK93_RS07090 PF01609 Transposase DDE domain DK93_RS07090 PF13808 DK93_RS07090 DK93_RS07130 PF02595 Glycerate kinase family DK93_RS07135 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DK93_RS07135 PF04851 Type III restriction enzyme, res subunit DK93_RS07135 PF12008 Type I restriction and modification enzyme - subunit R C terminal DK93_RS07140 PF01420 Type I restriction modification DNA specificity domain DK93_RS07145 PF02384 N-6 DNA Methylase DK93_RS07145 PF12161 HsdM N-terminal domain DK93_RS07155 PF00072 Response regulator receiver domain DK93_RS07155 PF00196 Bacterial regulatory proteins, luxR family DK93_RS07165 PF02687 DK93_RS07165 DK93_RS07170 PF00005 ABC transporter DK93_RS07175 PF00005 ABC transporter DK93_RS07180 PF13575 DK93_RS07180 DK93_RS07185 PF04604 Type-A lantibiotic DK93_RS07190 PF00232 Glycosyl hydrolase family 1 DK93_RS07195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS07195 PF02378 Phosphotransferase system, EIIC DK93_RS07200 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK93_RS07205 PF01791 DeoC/LacD family aldolase DK93_RS07210 PF00294 pfkB family carbohydrate kinase DK93_RS07215 PF02502 Ribose/Galactose Isomerase DK93_RS07220 PF02502 Ribose/Galactose Isomerase DK93_RS07225 PF00455 DK93_RS07225 DK93_RS07225 PF08220 DeoR-like helix-turn-helix domain DK93_RS07235 PF05016 Plasmid stabilisation system protein DK93_RS07240 PF00380 Ribosomal protein S9/S16 DK93_RS07245 PF00572 Ribosomal protein L13 DK93_RS07250 PF01381 Helix-turn-helix DK93_RS07260 PF02645 Uncharacterised protein, DegV family COG1307 DK93_RS07265 PF05991 DK93_RS07265 DK93_RS07270 PF00588 SpoU rRNA Methylase family DK93_RS07270 PF08032 RNA 2'-O ribose methyltransferase substrate binding DK93_RS07280 PF00636 Ribonuclease III domain DK93_RS07285 PF01406 tRNA synthetases class I (C) catalytic domain DK93_RS07285 PF09190 DALR domain DK93_RS07295 PF00132 Bacterial transferase hexapeptide (six repeats) DK93_RS07300 PF07179 DK93_RS07300 DK93_RS07305 PF00013 KH domain DK93_RS07305 PF00575 S1 RNA binding domain DK93_RS07305 PF01138 3' exoribonuclease family, domain 1 DK93_RS07305 PF03725 3' exoribonuclease family, domain 2 DK93_RS07305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DK93_RS07310 PF00923 Transaldolase DK93_RS07315 PF03611 DK93_RS07315 DK93_RS07320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS07325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK93_RS07325 PF00874 PRD domain DK93_RS07330 PF00312 Ribosomal protein S15 DK93_RS07345 PF01327 Polypeptide deformylase DK93_RS07350 PF03358 NADPH-dependent FMN reductase DK93_RS07355 PF01047 MarR family DK93_RS07360 PF00929 Exonuclease DK93_RS07360 PF02811 PHP domain DK93_RS07360 PF07733 Bacterial DNA polymerase III alpha subunit DK93_RS07360 PF11490 DK93_RS07360 DK93_RS07360 PF14480 DK93_RS07360 DK93_RS07360 PF14579 Helix-hairpin-helix motif DK93_RS07365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK93_RS07365 PF03129 Anticodon binding domain DK93_RS07365 PF04073 Aminoacyl-tRNA editing domain DK93_RS07370 PF02163 Peptidase family M50 DK93_RS07370 PF13180 PDZ domain DK93_RS07375 PF01148 Cytidylyltransferase family DK93_RS07380 PF01255 Putative undecaprenyl diphosphate synthase DK93_RS07385 PF02699 Preprotein translocase subunit DK93_RS07390 PF00085 Thioredoxin DK93_RS07395 PF00128 Alpha amylase, catalytic domain DK93_RS07395 PF00746 DK93_RS07395 DK93_RS07395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DK93_RS07395 PF03714 Bacterial pullanase-associated domain DK93_RS07400 PF00128 Alpha amylase, catalytic domain DK93_RS07400 PF11941 Domain of unknown function (DUF3459) DK93_RS07405 PF00005 ABC transporter DK93_RS07405 PF03459 TOBE domain DK93_RS07410 PF13556 PucR C-terminal helix-turn-helix domain DK93_RS07415 PF02821 Staphylokinase/Streptokinase family DK93_RS07420 PF02580 D-Tyr-tRNA(Tyr) deacylase DK93_RS07425 PF02824 TGS domain DK93_RS07425 PF04607 Region found in RelA / SpoT proteins DK93_RS07425 PF13291 ACT domain DK93_RS07425 PF13328 HD domain DK93_RS07430 PF00746 DK93_RS07430 DK93_RS07430 PF01391 Collagen triple helix repeat (20 copies) DK93_RS07435 PF07972 NrdI Flavodoxin like DK93_RS07440 PF03372 Endonuclease/Exonuclease/phosphatase family DK93_RS07445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK93_RS07445 PF00367 phosphotransferase system, EIIB DK93_RS07445 PF02378 Phosphotransferase system, EIIC DK93_RS07450 PF04452 RNA methyltransferase DK93_RS07455 PF06325 Ribosomal protein L11 methyltransferase (PrmA) DK93_RS07460 PF11217 Protein of unknown function (DUF3013) DK93_RS07465 PF01425 Amidase DK93_RS07470 PF00425 chorismate binding enzyme DK93_RS07470 PF01063 Aminotransferase class IV DK93_RS07475 PF00117 Glutamine amidotransferase class-I DK93_RS07480 PF00004 ATPase family associated with various cellular activities (AAA) DK93_RS07480 PF12002 MgsA AAA+ ATPase C terminal DK93_RS07480 PF16193 DK93_RS07480 DK93_RS07490 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DK93_RS07490 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK93_RS07495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK93_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component DK93_RS07510 PF00005 ABC transporter DK93_RS07515 PF00005 ABC transporter DK93_RS07520 PF05532 CsbD-like DK93_RS07525 PF04270 Streptococcal histidine triad protein DK93_RS07530 PF01297 Periplasmic solute binding protein family DK93_RS07535 PF00746 DK93_RS07535 DK93_RS07535 PF04650 DK93_RS07535 DK93_RS07540 PF00082 Subtilase family DK93_RS07540 PF02225 PA domain DK93_RS07540 PF06280 Fn3-like domain (DUF1034) DK93_RS07540 PF13585 C-terminal domain of CHU protein family DK93_RS07545 PF00746 DK93_RS07545 DK93_RS07545 PF02370 M protein repeat DK93_RS07545 PF04650 DK93_RS07545 DK93_RS07550 PF00746 DK93_RS07550 DK93_RS07550 PF04650 DK93_RS07550 DK93_RS07550 PF12107 Plasminogen (Pg) ligand in fibrinolytic pathway DK93_RS07555 PF00746 DK93_RS07555 DK93_RS07555 PF04650 DK93_RS07555 DK93_RS07560 PF05043 Mga helix-turn-helix domain DK93_RS07560 PF08270 DK93_RS07560 DK93_RS07560 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DK93_RS07570 PF05257 CHAP domain DK93_RS07575 PF00512 His Kinase A (phospho-acceptor) domain DK93_RS07575 PF00672 HAMP domain DK93_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS07580 PF00072 Response regulator receiver domain DK93_RS07580 PF00486 Transcriptional regulatory protein, C terminal DK93_RS07585 PF02687 DK93_RS07585 DK93_RS07585 PF12704 MacB-like periplasmic core domain DK93_RS07590 PF00005 ABC transporter DK93_RS07595 PF16576 DK93_RS07595 DK93_RS07605 PF14131 Domain of unknown function (DUF4298) DK93_RS07615 PF13145 PPIC-type PPIASE domain DK93_RS07620 PF13734 Spi protease inhibitor DK93_RS07625 PF01640 Peptidase C10 family DK93_RS07625 PF13734 Spi protease inhibitor DK93_RS07635 PF01223 DNA/RNA non-specific endonuclease DK93_RS07640 PF04608 Phosphatidylglycerophosphatase A DK93_RS07645 PF00465 Iron-containing alcohol dehydrogenase DK93_RS07650 PF00923 Transaldolase DK93_RS07655 PF01228 Glycine radical DK93_RS07655 PF02901 Pyruvate formate lyase DK93_RS07660 PF02378 Phosphotransferase system, EIIC DK93_RS07665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK93_RS07670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK93_RS07675 PF04198 Putative sugar-binding domain DK93_RS07680 PF00455 DK93_RS07680 DK93_RS07680 PF08220 DeoR-like helix-turn-helix domain DK93_RS07685 PF04055 Radical SAM superfamily DK93_RS07685 PF13353 4Fe-4S single cluster domain DK93_RS07690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DK93_RS07695 PF00905 Penicillin binding protein transpeptidase domain DK93_RS07695 PF00912 Transglycosylase DK93_RS07710 PF00849 RNA pseudouridylate synthase DK93_RS07720 PF03577 DK93_RS07720 DK93_RS07725 PF12844 Helix-turn-helix domain DK93_RS07730 PF00118 TCP-1/cpn60 chaperonin family DK93_RS07735 PF00166 Chaperonin 10 Kd subunit DK93_RS07740 PF00004 ATPase family associated with various cellular activities (AAA) DK93_RS07740 PF02861 Clp amino terminal domain DK93_RS07740 PF07724 AAA domain (Cdc48 subfamily) DK93_RS07740 PF10431 C-terminal, D2-small domain, of ClpB protein DK93_RS07745 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) DK93_RS07750 PF00313 'Cold-shock' DNA-binding domain DK93_RS07760 PF00578 AhpC/TSA family DK93_RS07760 PF10417 C-terminal domain of 1-Cys peroxiredoxin DK93_RS07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK93_RS07765 PF13192 Thioredoxin domain DK93_RS07770 PF01979 Amidohydrolase family DK93_RS07775 PF01175 Urocanase DK93_RS07780 PF02971 Formiminotransferase domain DK93_RS07780 PF07837 Formiminotransferase domain, N-terminal subdomain DK93_RS07785 PF04961 Formiminotransferase-cyclodeaminase DK93_RS07790 PF01268 Formate--tetrahydrofolate ligase DK93_RS07795 PF05962 HutD DK93_RS07800 PF13520 Amino acid permease DK93_RS07805 PF00221 Aromatic amino acid lyase DK93_RS07810 PF00491 Arginase family DK93_RS07815 PF03704 Bacterial transcriptional activator domain DK93_RS07815 PF13191 AAA ATPase domain DK93_RS07820 PF00318 Ribosomal protein S2 DK93_RS07825 PF00889 Elongation factor TS DK93_RS07830 PF01431 Peptidase family M13 DK93_RS07830 PF05649 Peptidase family M13 DK93_RS07835 PF00128 Alpha amylase, catalytic domain DK93_RS07835 PF11941 Domain of unknown function (DUF3459) DK93_RS07840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK93_RS07840 PF00367 phosphotransferase system, EIIB DK93_RS07840 PF02378 Phosphotransferase system, EIIC DK93_RS07845 PF00392 Bacterial regulatory proteins, gntR family DK93_RS07845 PF07702 UTRA domain DK93_RS07855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK93_RS07860 PF03883 DK93_RS07860 DK93_RS07865 PF13353 4Fe-4S single cluster domain DK93_RS07870 PF13302 Acetyltransferase (GNAT) domain DK93_RS07875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK93_RS07880 PF03477 ATP cone domain DK93_RS07880 PF13597 Anaerobic ribonucleoside-triphosphate reductase DK93_RS07885 PF09852 DK93_RS07885 DK93_RS07890 PF06949 DK93_RS07890 DK93_RS07895 PF03652 Uncharacterised protein family (UPF0081) DK93_RS07900 PF06135 DK93_RS07900 DK93_RS07905 PF03960 ArsC family DK93_RS07910 PF00154 recA bacterial DNA recombination protein DK93_RS07915 PF00994 Probable molybdopterin binding domain DK93_RS07915 PF02464 Competence-damaged protein DK93_RS07920 PF03352 Methyladenine glycosylase DK93_RS07925 PF01330 RuvA N terminal domain DK93_RS07925 PF07499 RuvA, C-terminal domain DK93_RS07925 PF14520 Helix-hairpin-helix domain DK93_RS07930 PF07690 Major Facilitator Superfamily DK93_RS07935 PF01119 DNA mismatch repair protein, C-terminal domain DK93_RS07935 PF08676 MutL C terminal dimerisation domain DK93_RS07935 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK93_RS07940 PF00488 MutS domain V DK93_RS07940 PF01624 MutS domain I DK93_RS07940 PF05188 MutS domain II DK93_RS07940 PF05190 MutS family domain IV DK93_RS07940 PF05192 MutS domain III DK93_RS07950 PF01316 Arginine repressor, DNA binding domain DK93_RS07950 PF02863 Arginine repressor, C-terminal domain DK93_RS07955 PF00750 tRNA synthetases class I (R) DK93_RS07955 PF03485 Arginyl tRNA synthetase N terminal domain DK93_RS07955 PF05746 DALR anticodon binding domain DK93_RS07960 PF08951 Enterocin A Immunity DK93_RS07965 PF02588 DK93_RS07965 DK93_RS07965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK93_RS07970 PF02588 DK93_RS07970 DK93_RS07970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK93_RS07975 PF02588 DK93_RS07975 DK93_RS07975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK93_RS07980 PF00152 tRNA synthetases class II (D, K and N) DK93_RS07980 PF01336 OB-fold nucleic acid binding domain DK93_RS07980 PF02938 GAD domain DK93_RS07985 PF03129 Anticodon binding domain DK93_RS07985 PF13393 Histidyl-tRNA synthetase DK93_RS07990 PF01783 Ribosomal L32p protein family DK93_RS07995 PF00471 Ribosomal protein L33 DK93_RS08000 PF03596 DK93_RS08000 DK93_RS08005 PF01022 Bacterial regulatory protein, arsR family DK93_RS08015 PF00005 ABC transporter DK93_RS08030 PF04018 DK93_RS08030 DK93_RS08035 PF00293 NUDIX domain DK93_RS08040 PF03551 Transcriptional regulator PadR-like family DK93_RS08045 PF08006 DK93_RS08045 DK93_RS08050 PF13349 DK93_RS08050 DK93_RS08055 PF12051 DK93_RS08055 DK93_RS08060 PF00440 Bacterial regulatory proteins, tetR family DK93_RS08065 PF00163 Ribosomal protein S4/S9 N-terminal domain DK93_RS08065 PF01479 S4 domain DK93_RS08070 PF06257 Protein of unknown function (DUF1021) DK93_RS08075 PF00772 DnaB-like helicase N terminal domain DK93_RS08075 PF03796 DnaB-like helicase C terminal domain DK93_RS08080 PF01281 Ribosomal protein L9, N-terminal domain DK93_RS08080 PF03948 Ribosomal protein L9, C-terminal domain DK93_RS08085 PF01368 DHH family DK93_RS08085 PF02272 DHHA1 domain DK93_RS08090 PF01134 Glucose inhibited division protein A DK93_RS08090 PF13932 GidA associated domain 3 DK93_RS08100 PF03054 tRNA methyl transferase DK93_RS08105 PF01842 ACT domain DK93_RS08105 PF03315 Serine dehydratase beta chain DK93_RS08110 PF03313 DK93_RS08110 DK93_RS08115 PF01464 Transglycosylase SLT domain DK93_RS08120 PF02361 Cobalt transport protein DK93_RS08125 PF00005 ABC transporter DK93_RS08130 PF00005 ABC transporter DK93_RS08135 PF01066 CDP-alcohol phosphatidyltransferase DK93_RS08140 PF13413 Helix-turn-helix domain DK93_RS08145 PF00675 Insulinase (Peptidase family M16) DK93_RS08145 PF05193 Peptidase M16 inactive domain DK93_RS08150 PF05193 Peptidase M16 inactive domain DK93_RS08155 PF00535 Glycosyl transferase family 2 DK93_RS08160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DK93_RS08160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DK93_RS08160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DK93_RS08165 PF00483 Nucleotidyl transferase DK93_RS08170 PF13275 S4 domain DK93_RS08175 PF02463 RecF/RecN/SMC N terminal domain DK93_RS08180 PF06800 DK93_RS08180 DK93_RS08185 PF00478 IMP dehydrogenase / GMP reductase domain DK93_RS08185 PF00571 CBS domain DK93_RS08190 PF00579 tRNA synthetases class I (W and Y) DK93_RS08195 PF02588 DK93_RS08195 DK93_RS08195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK93_RS08200 PF00005 ABC transporter DK93_RS08200 PF12848 ABC transporter DK93_RS08205 PF09586 DK93_RS08205 DK93_RS08220 PF00665 Integrase core domain DK93_RS08220 PF13936 Helix-turn-helix domain DK93_RS08230 PF02590 Predicted SPOUT methyltransferase DK93_RS08235 PF13180 PDZ domain DK93_RS08235 PF13365 Trypsin-like peptidase domain