DK93_RS00005	SM00470	ParB-like nuclease domain
DK93_RS00010	SM00382	ATPases associated with a variety of cellular activities
DK93_RS00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
DK93_RS00015	SM00480	DNA polymerase III beta subunit
DK93_RS00035	SM00487	DEAD-like helicases superfamily
DK93_RS00035	SM00490	helicase superfamily c-terminal domain
DK93_RS00035	SM00982	DK93_RS00035
DK93_RS00035	SM01058	CarD-like/TRCF domain
DK93_RS00040	SM00363	S4 RNA-binding domain
DK93_RS00065	SM00382	ATPases associated with a variety of cellular activities
DK93_RS00250	SM01400	DK93_RS00250
DK93_RS00275	SM01211	DK93_RS00275
DK93_RS00295	SM00798	AICARFT/IMPCHase bienzyme
DK93_RS00295	SM00851	MGS-like domain
DK93_RS00305	SM01209	DK93_RS00305
DK93_RS00305	SM01210	DK93_RS00305
DK93_RS00310	SM01001	AIR carboxylase
DK93_RS00325	SM00998	Adenylosuccinate lyase C-terminus
DK93_RS00330	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS00335	SM00382	ATPases associated with a variety of cellular activities
DK93_RS00340	SM00226	Low molecular weight phosphatase family
DK93_RS00345	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
DK93_RS00360	SM00829	Enoylreductase
DK93_RS00370	SM01403	DK93_RS00370
DK93_RS00390	SM01382	DK93_RS00390
DK93_RS00390	SM01383	DK93_RS00390
DK93_RS00405	SM00322	K homology RNA-binding domain
DK93_RS00425	SM01374	DK93_RS00425
DK93_RS00430	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
DK93_RS00485	SM00316	Ribosomal protein S1-like RNA-binding domain
DK93_RS00500	SM00662	RNA polymerases D
DK93_RS00605	SM00347	helix_turn_helix multiple antibiotic resistance protein
DK93_RS00610	SM00382	ATPases associated with a variety of cellular activities
DK93_RS00625	SM00363	S4 RNA-binding domain
DK93_RS00640	SM00663	RNA polymerase I subunit A N-terminus
DK93_RS00775	SM00342	helix_turn_helix, arabinose operon control protein
DK93_RS00805	SM00882	Coenzyme A transferase
DK93_RS00810	SM00882	Coenzyme A transferase
DK93_RS00885	SM00788	Adenylosuccinate synthetase
DK93_RS00895	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
DK93_RS00895	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
DK93_RS00945	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
DK93_RS00955	SM01007	Class II Aldolase and Adducin N-terminal domain
DK93_RS00970	SM00382	ATPases associated with a variety of cellular activities
DK93_RS00980	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
DK93_RS00980	SM00474	3'-5' exonuclease
DK93_RS00980	SM00475	5'-3' exonuclease
DK93_RS00980	SM00482	DNA polymerase A domain
DK93_RS00985	SM00881	CoA binding domain
DK93_RS01010	SM00849	Metallo-beta-lactamase superfamily
DK93_RS01020	SM00460	Transglutaminase/protease-like homologues
DK93_RS01055	SM00347	helix_turn_helix multiple antibiotic resistance protein
DK93_RS01060	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01065	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01080	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01085	SM00947	Carbonic anhydrase
DK93_RS01115	SM00448	cheY-homologous receiver domain
DK93_RS01115	SM00850	LytTr DNA-binding domain
DK93_RS01130	SM00393	Putative single-stranded nucleic acids-binding domain
DK93_RS01130	SM01245	DK93_RS01130
DK93_RS01165	SM01130	DK93_RS01165
DK93_RS01190	SM00650	Ribosomal RNA adenine dimethylases
DK93_RS01205	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
DK93_RS01240	SM00838	Elongation factor G C-terminus
DK93_RS01240	SM00889	Elongation factor G, domain IV
DK93_RS01245	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DK93_RS01250	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01255	SM00062	Bacterial periplasmic substrate-binding proteins
DK93_RS01280	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01310	SM00936	Penicillin-binding protein 5, C-terminal domain 
DK93_RS01330	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01335	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01445	SM01120	DK93_RS01445
DK93_RS01445	SM01121	DK93_RS01445
DK93_RS01450	SM00244	prohibitin homologues
DK93_RS01470	SM00422	helix_turn_helix, mercury resistance
DK93_RS01475	SM01230	DK93_RS01475
DK93_RS01480	SM00849	Metallo-beta-lactamase superfamily
DK93_RS01510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS01525	SM01133	DK93_RS01525
DK93_RS01540	SM00479	DK93_RS01540
DK93_RS01545	SM00422	helix_turn_helix, mercury resistance
DK93_RS01555	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS01560	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS01565	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
DK93_RS01565	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
DK93_RS01570	SM00419	helix_turn_helix, cAMP Regulatory protein
DK93_RS01615	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01640	SM00463	Small MutS-related domain
DK93_RS01640	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
DK93_RS01640	SM00534	ATPase domain of DNA mismatch repair MUTS family
DK93_RS01645	SM00014	Acid phosphatase homologues
DK93_RS01655	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS01660	SM00478	endonuclease III
DK93_RS01695	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01710	SM00841	Elongation factor P, C-terminal
DK93_RS01710	SM01185	DK93_RS01710
DK93_RS01725	SM00354	helix_turn _helix lactose operon repressor
DK93_RS01730	SM00640	Glycosyl hydrolases family 32
DK93_RS01755	SM00957	SecA DEAD-like domain
DK93_RS01755	SM00958	SecA preprotein cross-linking domain
DK93_RS01765	SM01005	Alanine racemase, C-terminal domain
DK93_RS01775	SM00365	Leucine-rich repeat, SDS22-like subfamily
DK93_RS01775	SM00369	Leucine-rich repeats, typical (most populated) subfamily
DK93_RS01775	SM00725	NEAr Transporter domain
DK93_RS01795	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01800	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01805	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01820	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01825	SM00487	DEAD-like helicases superfamily
DK93_RS01825	SM00490	helicase superfamily c-terminal domain
DK93_RS01830	SM00382	ATPases associated with a variety of cellular activities
DK93_RS01840	SM00870	DK93_RS01840
DK93_RS01885	SM00845	GatB domain
DK93_RS01900	SM00855	Phosphoglycerate mutase family
DK93_RS01910	SM00047	Lysozyme subfamily 2
DK93_RS01930	SM00271	DnaJ molecular chaperone homology domain
DK93_RS01940	SM00347	helix_turn_helix multiple antibiotic resistance protein
DK93_RS01960	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DK93_RS01965	SM00822	DK93_RS01965
DK93_RS01970	SM00825	Beta-ketoacyl synthase
DK93_RS01985	SM00878	Biotin carboxylase C-terminal domain
DK93_RS02060	SM00382	ATPases associated with a variety of cellular activities
DK93_RS02090	SM00322	K homology RNA-binding domain
DK93_RS02135	SM00420	helix_turn_helix, Deoxyribose operon repressor
DK93_RS02135	SM01134	DK93_RS02135
DK93_RS02170	SM01133	DK93_RS02170
DK93_RS02270	SM00861	Transketolase, pyrimidine binding domain
DK93_RS02280	SM00382	ATPases associated with a variety of cellular activities
DK93_RS02315	SM00740	DK93_RS02315
DK93_RS02325	SM00487	DEAD-like helicases superfamily
DK93_RS02325	SM00490	helicase superfamily c-terminal domain
DK93_RS02335	SM00382	ATPases associated with a variety of cellular activities
DK93_RS02390	SM00981	DK93_RS02390
DK93_RS02415	SM00882	Coenzyme A transferase
DK93_RS02420	SM00882	Coenzyme A transferase
DK93_RS02435	SM00322	K homology RNA-binding domain
DK93_RS02435	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DK93_RS02440	SM00072	Guanylate kinase homologues.
DK93_RS02445	SM01409	DK93_RS02445
DK93_RS02450	SM00487	DEAD-like helicases superfamily
DK93_RS02450	SM00490	helicase superfamily c-terminal domain
DK93_RS02465	SM00331	Sigma factor PP2C-like phosphatases
DK93_RS02465	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
DK93_RS02470	SM00220	Serine/Threonine protein kinases, catalytic domain
DK93_RS02470	SM00740	DK93_RS02470
DK93_RS02480	SM00387	Histidine kinase-like ATPases
DK93_RS02485	SM00421	helix_turn_helix, Lux Regulon
DK93_RS02485	SM00448	cheY-homologous receiver domain
DK93_RS02495	SM00316	Ribosomal protein S1-like RNA-binding domain
DK93_RS02510	SM00487	DEAD-like helicases superfamily
DK93_RS02510	SM00490	helicase superfamily c-terminal domain
DK93_RS02600	SM00872	Alpha mannosidase, middle domain
DK93_RS02605	SM01149	DK93_RS02605
DK93_RS02610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS02650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DK93_RS02655	SM00342	helix_turn_helix, arabinose operon control protein
DK93_RS02655	SM00448	cheY-homologous receiver domain
DK93_RS02760	SM00342	helix_turn_helix, arabinose operon control protein
DK93_RS02760	SM00448	cheY-homologous receiver domain
DK93_RS02765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DK93_RS02765	SM00387	Histidine kinase-like ATPases
DK93_RS02775	SM00873	B3/4 domain
DK93_RS02785	SM00419	helix_turn_helix, cAMP Regulatory protein
DK93_RS02840	SM00354	helix_turn _helix lactose operon repressor
DK93_RS02875	SM00450	Rhodanese Homology Domain
DK93_RS02880	SM00838	Elongation factor G C-terminus
DK93_RS02905	SM00842	Cell division protein FtsA
DK93_RS02910	SM00864	Tubulin/FtsZ family, GTPase domain
DK93_RS02910	SM00865	Tubulin/FtsZ family, C-terminal domain
DK93_RS02930	SM00363	S4 RNA-binding domain
DK93_RS02955	SM00382	ATPases associated with a variety of cellular activities
DK93_RS02955	SM01086	C-terminal, D2-small domain, of ClpB protein
DK93_RS02970	SM00382	ATPases associated with a variety of cellular activities
DK93_RS03005	SM00363	S4 RNA-binding domain
DK93_RS03040	SM00411	bacterial (prokaryotic) histone like domain
DK93_RS03055	SM00855	Phosphoglycerate mutase family
DK93_RS03080	SM00493	DK93_RS03080
DK93_RS03105	SM00487	DEAD-like helicases superfamily
DK93_RS03105	SM00490	helicase superfamily c-terminal domain
DK93_RS03125	SM00563	Phosphate acyltransferases
DK93_RS03130	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DK93_RS03135	SM00849	Metallo-beta-lactamase superfamily
DK93_RS03180	SM00363	S4 RNA-binding domain
DK93_RS03210	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DK93_RS03220	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS03290	SM00487	DEAD-like helicases superfamily
DK93_RS03290	SM00490	helicase superfamily c-terminal domain
DK93_RS03315	SM00382	ATPases associated with a variety of cellular activities
DK93_RS03325	SM00364	Leucine-rich repeats, bacterial type
DK93_RS03325	SM00365	Leucine-rich repeat, SDS22-like subfamily
DK93_RS03350	SM00116	Domain in cystathionine beta-synthase and other proteins.
DK93_RS03410	SM00363	S4 RNA-binding domain
DK93_RS03500	SM00382	ATPases associated with a variety of cellular activities
DK93_RS03505	SM00062	Bacterial periplasmic substrate-binding proteins
DK93_RS03505	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
DK93_RS03510	SM00487	DEAD-like helicases superfamily
DK93_RS03510	SM00490	helicase superfamily c-terminal domain
DK93_RS03570	SM00354	helix_turn _helix lactose operon repressor
DK93_RS03600	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS03620	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS03650	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS03680	SM00490	helicase superfamily c-terminal domain
DK93_RS03695	SM00942	Primase C terminal 1 (PriCT-1)
DK93_RS03695	SM00943	Bifunctional DNA primase/polymerase, N-terminal
DK93_RS03700	SM00990	DK93_RS03700
DK93_RS03770	SM00047	Lysozyme subfamily 2
DK93_RS03780	SM00287	Bacterial SH3 domain homologues
DK93_RS03815	SM00382	ATPases associated with a variety of cellular activities
DK93_RS03820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS03825	SM00481	DNA polymerase alpha chain like domain
DK93_RS03860	SM00382	ATPases associated with a variety of cellular activities
DK93_RS03865	SM00062	Bacterial periplasmic substrate-binding proteins
DK93_RS03920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS03930	SM00382	ATPases associated with a variety of cellular activities
DK93_RS03960	SM00904	Riboflavin kinase
DK93_RS04000	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04005	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04020	SM00448	cheY-homologous receiver domain
DK93_RS04020	SM00862	Transcriptional regulatory protein, C terminal
DK93_RS04025	SM00387	Histidine kinase-like ATPases
DK93_RS04025	SM00388	His Kinase A (phosphoacceptor) domain
DK93_RS04055	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04110	SM00506	Appr-1"-p processing enzyme
DK93_RS04130	SM00155	Phospholipase D. Active site motifs.
DK93_RS04140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS04155	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS04175	SM00866	DK93_RS04175
DK93_RS04185	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04185	SM00962	SRP54-type protein, GTPase domain
DK93_RS04185	SM00963	SRP54-type protein, helical bundle domain
DK93_RS04190	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS04205	SM00764	Citrate lyase ligase C-terminal domain
DK93_RS04260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS04260	SM00895	DK93_RS04260
DK93_RS04295	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
DK93_RS04295	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
DK93_RS04295	SM00493	DK93_RS04295
DK93_RS04325	SM00046	Diacylglycerol kinase catalytic domain (presumed)
DK93_RS04345	SM00434	DNA Topoisomerase IV
DK93_RS04360	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04365	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04400	SM00937	DK93_RS04400
DK93_RS04430	SM01240	DK93_RS04430
DK93_RS04440	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04470	SM00954	Region found in RelA / SpoT proteins
DK93_RS04475	SM01118	DK93_RS04475
DK93_RS04480	SM01400	DK93_RS04480
DK93_RS04495	SM00881	CoA binding domain
DK93_RS04535	SM00919	Malic enzyme, NAD binding domain
DK93_RS04535	SM01274	DK93_RS04535
DK93_RS04550	SM00448	cheY-homologous receiver domain
DK93_RS04570	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04585	SM00905	Dihydroneopterin aldolase
DK93_RS04610	SM00936	Penicillin-binding protein 5, C-terminal domain 
DK93_RS04640	SM00465	GIY-YIG type nucleases (URI domain)
DK93_RS04655	SM00342	helix_turn_helix, arabinose operon control protein
DK93_RS04655	SM00448	cheY-homologous receiver domain
DK93_RS04700	SM00838	Elongation factor G C-terminus
DK93_RS04740	SM00729	Elongator protein 3, MiaB family, Radical SAM
DK93_RS04800	SM00861	Transketolase, pyrimidine binding domain
DK93_RS04810	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04825	SM00849	Metallo-beta-lactamase superfamily
DK93_RS04830	SM00382	ATPases associated with a variety of cellular activities
DK93_RS04855	SM00028	Tetratricopeptide repeats
DK93_RS04900	SM00478	endonuclease III
DK93_RS04900	SM00525	DK93_RS04900
DK93_RS04955	SM00450	Rhodanese Homology Domain
DK93_RS04970	SM00316	Ribosomal protein S1-like RNA-binding domain
DK93_RS04995	SM00434	DNA Topoisomerase IV
DK93_RS05000	SM00387	Histidine kinase-like ATPases
DK93_RS05000	SM00433	TopoisomeraseII
DK93_RS05005	SM01207	DK93_RS05005
DK93_RS05015	SM00986	Uracil DNA glycosylase superfamily
DK93_RS05015	SM00987	UreE urease accessory protein, C-terminal domain 
DK93_RS05025	SM00062	Bacterial periplasmic substrate-binding proteins
DK93_RS05040	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
DK93_RS05085	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05085	SM01086	C-terminal, D2-small domain, of ClpB protein
DK93_RS05100	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05100	SM00994	ClpX C4-type zinc finger
DK93_RS05100	SM01086	C-terminal, D2-small domain, of ClpB protein
DK93_RS05150	SM00387	Histidine kinase-like ATPases
DK93_RS05150	SM00388	His Kinase A (phosphoacceptor) domain
DK93_RS05155	SM00448	cheY-homologous receiver domain
DK93_RS05155	SM00862	Transcriptional regulatory protein, C terminal
DK93_RS05160	SM00954	Region found in RelA / SpoT proteins
DK93_RS05180	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05220	SM00047	Lysozyme subfamily 2
DK93_RS05225	SM00047	Lysozyme subfamily 2
DK93_RS05240	SM00420	helix_turn_helix, Deoxyribose operon repressor
DK93_RS05240	SM01134	DK93_RS05240
DK93_RS05310	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05320	SM00851	MGS-like domain
DK93_RS05320	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DK93_RS05320	SM01209	DK93_RS05320
DK93_RS05325	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
DK93_RS05345	SM00363	S4 RNA-binding domain
DK93_RS05375	SM00854	Bacterial capsule synthesis protein PGA_cap
DK93_RS05380	SM00981	DK93_RS05380
DK93_RS05505	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05540	SM00400	zinc finger
DK93_RS05540	SM00493	DK93_RS05540
DK93_RS05555	SM00062	Bacterial periplasmic substrate-binding proteins
DK93_RS05555	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
DK93_RS05575	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05595	SM00873	B3/4 domain
DK93_RS05595	SM00874	tRNA synthetase B5 domain
DK93_RS05595	SM00896	Ferredoxin-fold anticodon binding domain
DK93_RS05630	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05665	SM00046	Diacylglycerol kinase catalytic domain (presumed)
DK93_RS05670	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DK93_RS05670	SM00292	breast cancer carboxy-terminal domain
DK93_RS05670	SM00532	Ligase N family
DK93_RS05695	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05730	SM01192	DK93_RS05730
DK93_RS05730	SM01193	DK93_RS05730
DK93_RS05745	SM00387	Histidine kinase-like ATPases
DK93_RS05745	SM00433	TopoisomeraseII
DK93_RS05770	SM00830	Chorismate mutase type II
DK93_RS05795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS05795	SM00866	DK93_RS05795
DK93_RS05835	SM00479	DK93_RS05835
DK93_RS05835	SM00487	DEAD-like helicases superfamily
DK93_RS05835	SM00491	DK93_RS05835
DK93_RS05860	SM00849	Metallo-beta-lactamase superfamily
DK93_RS05870	SM00382	ATPases associated with a variety of cellular activities
DK93_RS05875	SM00937	DK93_RS05875
DK93_RS05940	SM00354	helix_turn _helix lactose operon repressor
DK93_RS05945	SM00831	Cation transporter/ATPase, N-terminus
DK93_RS05955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DK93_RS06035	SM00855	Phosphoglycerate mutase family
DK93_RS06100	SM00731	SprT homologues.
DK93_RS06105	SM00316	Ribosomal protein S1-like RNA-binding domain
DK93_RS06105	SM00732	Likely ribonuclease with RNase H fold.
DK93_RS06135	SM01061	CAT RNA binding domain
DK93_RS06145	SM00382	ATPases associated with a variety of cellular activities
DK93_RS06145	SM00962	SRP54-type protein, GTPase domain
DK93_RS06145	SM00963	SRP54-type protein, helical bundle domain
DK93_RS06220	SM00984	UDP binding domain
DK93_RS06270	SM00968	SMC proteins Flexible Hinge Domain
DK93_RS06275	SM00358	Double-stranded RNA binding motif
DK93_RS06275	SM00535	Ribonuclease III family
DK93_RS06280	SM00849	Metallo-beta-lactamase superfamily
DK93_RS06285	SM00091	PAS domain
DK93_RS06285	SM00387	Histidine kinase-like ATPases
DK93_RS06285	SM00388	His Kinase A (phosphoacceptor) domain
DK93_RS06290	SM00448	cheY-homologous receiver domain
DK93_RS06290	SM00862	Transcriptional regulatory protein, C terminal
DK93_RS06325	SM00382	ATPases associated with a variety of cellular activities
DK93_RS06330	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DK93_RS06345	SM00354	helix_turn _helix lactose operon repressor
DK93_RS06395	SM00316	Ribosomal protein S1-like RNA-binding domain
DK93_RS06395	SM00955	DK93_RS06395
DK93_RS06420	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
DK93_RS06420	SM01232	DK93_RS06420
DK93_RS06425	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS06510	SM00986	Uracil DNA glycosylase superfamily
DK93_RS06510	SM00987	UreE urease accessory protein, C-terminal domain 
DK93_RS06525	SM00257	Lysin motif
DK93_RS06560	SM00649	Ribosomal protein L11/L12
DK93_RS06570	SM00382	ATPases associated with a variety of cellular activities
DK93_RS06570	SM00843	DK93_RS06570
DK93_RS06585	SM00382	ATPases associated with a variety of cellular activities
DK93_RS06595	SM00529	Helix-turn-helix diphteria tox regulatory element
DK93_RS06595	SM00899	DK93_RS06595
DK93_RS06775	SM00382	ATPases associated with a variety of cellular activities
DK93_RS06800	SM01131	DK93_RS06800
DK93_RS06810	SM01091	Transporter associated domain
DK93_RS06820	SM00729	Elongator protein 3, MiaB family, Radical SAM
DK93_RS06825	SM00014	Acid phosphatase homologues
DK93_RS06840	SM01234	DK93_RS06840
DK93_RS06845	SM00363	S4 RNA-binding domain
DK93_RS06865	SM00116	Domain in cystathionine beta-synthase and other proteins.
DK93_RS06900	SM00967	RNA 2'-O ribose methyltransferase substrate binding
DK93_RS06940	SM00487	DEAD-like helicases superfamily
DK93_RS06940	SM00490	helicase superfamily c-terminal domain
DK93_RS06965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DK93_RS06965	SM00387	Histidine kinase-like ATPases
DK93_RS06965	SM00388	His Kinase A (phosphoacceptor) domain
DK93_RS06970	SM00448	cheY-homologous receiver domain
DK93_RS06970	SM00862	Transcriptional regulatory protein, C terminal
DK93_RS07020	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07020	SM00930	DK93_RS07020
DK93_RS07030	SM00062	Bacterial periplasmic substrate-binding proteins
DK93_RS07055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DK93_RS07065	SM01103	DK93_RS07065
DK93_RS07135	SM00487	DEAD-like helicases superfamily
DK93_RS07155	SM00421	helix_turn_helix, Lux Regulon
DK93_RS07155	SM00448	cheY-homologous receiver domain
DK93_RS07170	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07205	SM01133	DK93_RS07205
DK93_RS07225	SM00420	helix_turn_helix, Deoxyribose operon repressor
DK93_RS07225	SM01134	DK93_RS07225
DK93_RS07250	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS07270	SM00967	RNA 2'-O ribose methyltransferase substrate binding
DK93_RS07285	SM00840	DK93_RS07285
DK93_RS07305	SM00316	Ribosomal protein S1-like RNA-binding domain
DK93_RS07305	SM00322	K homology RNA-binding domain
DK93_RS07330	SM01387	DK93_RS07330
DK93_RS07355	SM00347	helix_turn_helix multiple antibiotic resistance protein
DK93_RS07360	SM00479	DK93_RS07360
DK93_RS07360	SM00481	DNA polymerase alpha chain like domain
DK93_RS07385	SM01323	DK93_RS07385
DK93_RS07395	SM00642	Alpha-amylase domain
DK93_RS07400	SM00642	Alpha-amylase domain
DK93_RS07405	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07425	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DK93_RS07425	SM00954	Region found in RelA / SpoT proteins
DK93_RS07480	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07510	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07515	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DK93_RS07575	SM00387	Histidine kinase-like ATPases
DK93_RS07575	SM00388	His Kinase A (phosphoacceptor) domain
DK93_RS07580	SM00448	cheY-homologous receiver domain
DK93_RS07580	SM00862	Transcriptional regulatory protein, C terminal
DK93_RS07590	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07635	SM00892	DNA/RNA non-specific endonuclease
DK93_RS07680	SM00420	helix_turn_helix, Deoxyribose operon repressor
DK93_RS07680	SM01134	DK93_RS07680
DK93_RS07725	SM00530	Helix-turn-helix XRE-family like proteins 
DK93_RS07735	SM00883	Chaperonin 10 Kd subunit
DK93_RS07740	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07740	SM01086	C-terminal, D2-small domain, of ClpB protein
DK93_RS07750	SM00357	Cold shock protein domain
DK93_RS07780	SM01221	DK93_RS07780
DK93_RS07780	SM01222	DK93_RS07780
DK93_RS07815	SM00028	Tetratricopeptide repeats
DK93_RS07815	SM01043	Bacterial transcriptional activator domain
DK93_RS07835	SM00642	Alpha-amylase domain
DK93_RS07845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DK93_RS07845	SM00866	DK93_RS07845
DK93_RS07895	SM00732	Likely ribonuclease with RNase H fold.
DK93_RS07910	SM00382	ATPases associated with a variety of cellular activities
DK93_RS07915	SM00852	Probable molybdopterin binding domain
DK93_RS07925	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DK93_RS07935	SM00853	MutL C terminal dimerisation domain
DK93_RS07935	SM01340	DK93_RS07935
DK93_RS07940	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
DK93_RS07940	SM00534	ATPase domain of DNA mismatch repair MUTS family
DK93_RS07955	SM00836	DALR anticodon binding domain
DK93_RS07955	SM01016	Arginyl tRNA synthetase N terminal dom
DK93_RS08005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DK93_RS08065	SM00363	S4 RNA-binding domain
DK93_RS08065	SM01390	DK93_RS08065
DK93_RS08090	SM01228	DK93_RS08090
DK93_RS08125	SM00382	ATPases associated with a variety of cellular activities
DK93_RS08130	SM00382	ATPases associated with a variety of cellular activities
DK93_RS08160	SM00984	UDP binding domain
DK93_RS08185	SM00116	Domain in cystathionine beta-synthase and other proteins.
DK93_RS08185	SM01240	DK93_RS08185
DK93_RS08200	SM00382	ATPases associated with a variety of cellular activities
DK93_RS08235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
