locus-tag class description DK92_RS00005 PF17762 HTH domain found in ParB protein DK92_RS00005 PF02195 ParB-like nuclease domain DK92_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix DK92_RS00010 PF00308 Bacterial dnaA protein DK92_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DK92_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DK92_RS00015 PF02767 DNA polymerase III beta subunit, central domain DK92_RS00025 PF01926 50S ribosome-binding GTPase DK92_RS00025 PF06071 Protein of unknown function (DUF933) DK92_RS00030 PF01195 Peptidyl-tRNA hydrolase DK92_RS00035 PF17757 UvrB interaction domain DK92_RS00035 PF03461 TRCF domain DK92_RS00035 PF00270 DEAD/DEAH box helicase DK92_RS00035 PF02559 CarD-like/TRCF domain DK92_RS00035 PF00271 Helicase conserved C-terminal domain DK92_RS00040 PF01479 S4 domain DK92_RS00055 PF01171 PP-loop family DK92_RS00060 PF00156 Phosphoribosyl transferase domain DK92_RS00065 PF00004 ATPase family associated with various cellular activities (AAA) DK92_RS00065 PF17862 AAA+ lid domain DK92_RS00065 PF06480 FtsH Extracellular DK92_RS00065 PF01434 Peptidase family M41 DK92_RS00070 PF13520 Amino acid permease DK92_RS00245 PF01476 LysM domain DK92_RS00245 PF05257 CHAP domain DK92_RS00250 PF14572 Phosphoribosyl synthetase-associated domain DK92_RS00250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DK92_RS00255 PF02565 Recombination protein O C terminal DK92_RS00255 PF11967 Recombination protein O N terminal DK92_RS00260 PF02504 Fatty acid synthesis protein DK92_RS00265 PF00550 Phosphopantetheine attachment site DK92_RS00270 PF01259 SAICAR synthetase DK92_RS00275 PF00586 AIR synthase related protein, N-terminal domain DK92_RS00275 PF02769 AIR synthase related protein, C-terminal domain DK92_RS00275 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DK92_RS00280 PF00156 Phosphoribosyl transferase domain DK92_RS00280 PF13537 Glutamine amidotransferase domain DK92_RS00285 PF02769 AIR synthase related protein, C-terminal domain DK92_RS00285 PF00586 AIR synthase related protein, N-terminal domain DK92_RS00290 PF00551 Formyl transferase DK92_RS00295 PF02142 MGS-like domain DK92_RS00295 PF01808 AICARFT/IMPCHase bienzyme DK92_RS00305 PF02844 Phosphoribosylglycinamide synthetase, N domain DK92_RS00305 PF02843 Phosphoribosylglycinamide synthetase, C domain DK92_RS00305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DK92_RS00310 PF00731 AIR carboxylase DK92_RS00315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DK92_RS00315 PF02222 ATP-grasp domain DK92_RS00315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK92_RS00325 PF00206 Lyase DK92_RS00325 PF10397 Adenylosuccinate lyase C-terminus DK92_RS00335 PF05496 Holliday junction DNA helicase RuvB P-loop domain DK92_RS00335 PF05491 RuvB C-terminal winged helix domain DK92_RS00335 PF17864 RuvB AAA lid domain DK92_RS00340 PF01451 Low molecular weight phosphotyrosine protein phosphatase DK92_RS00350 PF01757 Acyltransferase family DK92_RS00355 PF00171 Aldehyde dehydrogenase family DK92_RS00355 PF00465 Iron-containing alcohol dehydrogenase DK92_RS00360 PF08240 Alcohol dehydrogenase GroES-like domain DK92_RS00360 PF00107 Zinc-binding dehydrogenase DK92_RS00365 PF01554 MatE DK92_RS00370 PF00338 Ribosomal protein S10p/S20e DK92_RS00375 PF00297 Ribosomal protein L3 DK92_RS00380 PF00573 Ribosomal protein L4/L1 family DK92_RS00385 PF00276 Ribosomal protein L23 DK92_RS00390 PF00181 Ribosomal Proteins L2, RNA binding domain DK92_RS00390 PF03947 Ribosomal Proteins L2, C-terminal domain DK92_RS00395 PF00203 Ribosomal protein S19 DK92_RS00400 PF00237 Ribosomal protein L22p/L17e DK92_RS00405 PF00189 Ribosomal protein S3, C-terminal domain DK92_RS00405 PF07650 KH domain DK92_RS00410 PF00252 Ribosomal protein L16p/L10e DK92_RS00415 PF00831 Ribosomal L29 protein DK92_RS00420 PF00366 Ribosomal protein S17 DK92_RS00425 PF00238 Ribosomal protein L14p/L23e DK92_RS00430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DK92_RS00430 PF00467 KOW motif DK92_RS00435 PF00281 Ribosomal protein L5 DK92_RS00435 PF00673 ribosomal L5P family C-terminus DK92_RS00440 PF00253 Ribosomal protein S14p/S29e DK92_RS00445 PF00410 Ribosomal protein S8 DK92_RS00450 PF00347 Ribosomal protein L6 DK92_RS00455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DK92_RS00460 PF00333 Ribosomal protein S5, N-terminal domain DK92_RS00460 PF03719 Ribosomal protein S5, C-terminal domain DK92_RS00465 PF00327 Ribosomal protein L30p/L7e DK92_RS00470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DK92_RS00475 PF00344 SecY translocase DK92_RS00485 PF01176 Translation initiation factor 1A / IF-1 DK92_RS00490 PF00416 Ribosomal protein S13/S18 DK92_RS00495 PF00411 Ribosomal protein S11 DK92_RS00500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DK92_RS00500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DK92_RS00500 PF01000 RNA polymerase Rpb3/RpoA insert domain DK92_RS00505 PF01196 Ribosomal protein L17 DK92_RS00595 PF00288 GHMP kinases N terminal domain DK92_RS00595 PF08544 GHMP kinases C terminal DK92_RS00600 PF08544 GHMP kinases C terminal DK92_RS00600 PF00288 GHMP kinases N terminal domain DK92_RS00605 PF01047 MarR family DK92_RS00610 PF00005 ABC transporter DK92_RS00615 PF00950 ABC 3 transport family DK92_RS00625 PF01479 S4 domain DK92_RS00625 PF00579 tRNA synthetases class I (W and Y) DK92_RS00630 PF00905 Penicillin binding protein transpeptidase domain DK92_RS00630 PF00912 Transglycosylase DK92_RS00635 PF04561 RNA polymerase Rpb2, domain 2 DK92_RS00635 PF04565 RNA polymerase Rpb2, domain 3 DK92_RS00635 PF04563 RNA polymerase beta subunit DK92_RS00635 PF00562 RNA polymerase Rpb2, domain 6 DK92_RS00635 PF04560 RNA polymerase Rpb2, domain 7 DK92_RS00635 PF10385 RNA polymerase beta subunit external 1 domain DK92_RS00640 PF04998 RNA polymerase Rpb1, domain 5 DK92_RS00640 PF05000 RNA polymerase Rpb1, domain 4 DK92_RS00640 PF04983 RNA polymerase Rpb1, domain 3 DK92_RS00640 PF04997 RNA polymerase Rpb1, domain 1 DK92_RS00640 PF00623 RNA polymerase Rpb1, domain 2 DK92_RS00650 PF00437 Type II/IV secretion system protein DK92_RS00660 PF07963 Prokaryotic N-terminal methylation motif DK92_RS00690 PF00871 Acetokinase family DK92_RS00700 PF03807 NADP oxidoreductase coenzyme F420-dependent DK92_RS00700 PF14748 Pyrroline-5-carboxylate reductase dimerisation DK92_RS00705 PF05343 M42 glutamyl aminopeptidase DK92_RS00715 PF00085 Thioredoxin DK92_RS00720 PF01588 Putative tRNA binding domain DK92_RS00720 PF14794 Domain of unknown function (DUF4479) DK92_RS00725 PF00436 Single-strand binding protein family DK92_RS00735 PF01712 Deoxynucleoside kinase DK92_RS00740 PF01207 Dihydrouridine synthase (Dus) DK92_RS00745 PF01430 Hsp33 protein DK92_RS00760 PF17802 Prealbumin-like fold domain DK92_RS00760 PF08341 Thioester domain DK92_RS00770 PF17802 Prealbumin-like fold domain DK92_RS00770 PF08341 Thioester domain DK92_RS00780 PF12892 Spy0128-like isopeptide containing domain DK92_RS00785 PF04203 Sortase domain DK92_RS00810 PF02667 Short chain fatty acid transporter DK92_RS00820 PF02803 Thiolase, C-terminal domain DK92_RS00820 PF00108 Thiolase, N-terminal domain DK92_RS00825 PF01144 Coenzyme A transferase DK92_RS00830 PF01144 Coenzyme A transferase DK92_RS00840 PF01042 Endoribonuclease L-PSP DK92_RS00855 PF01496 V-type ATPase 116kDa subunit family DK92_RS00860 PF00137 ATP synthase subunit C DK92_RS00870 PF01992 ATP synthase (C/AC39) subunit DK92_RS00875 PF01990 ATP synthase (F/14-kDa) subunit DK92_RS00880 PF16886 ATPsynthase alpha/beta subunit N-term extension DK92_RS00880 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK92_RS00880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK92_RS00885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK92_RS00885 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK92_RS00890 PF01813 ATP synthase subunit D DK92_RS00905 PF00709 Adenylosuccinate synthetase DK92_RS00910 PF02608 ABC transporter substrate-binding protein PnrA-like DK92_RS00915 PF02357 Transcription termination factor nusG DK92_RS00915 PF00467 KOW motif DK92_RS00930 PF17440 Thiol-activated cytolysin beta sandwich domain DK92_RS00930 PF01289 Thiol-activated cytolysin DK92_RS00950 PF01053 Cys/Met metabolism PLP-dependent enzyme DK92_RS00955 PF13603 Leucyl-tRNA synthetase, Domain 2 DK92_RS00955 PF08264 Anticodon-binding domain of tRNA DK92_RS00955 PF09334 tRNA synthetases class I (M) DK92_RS00955 PF00133 tRNA synthetases class I (I, L, M and V) DK92_RS00960 PF03611 PTS system sugar-specific permease component DK92_RS00965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS00970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK92_RS00975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK92_RS00980 PF01261 Xylose isomerase-like TIM barrel DK92_RS00985 PF00596 Class II Aldolase and Adducin N-terminal domain DK92_RS01000 PF00005 ABC transporter DK92_RS01000 PF00571 CBS domain DK92_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS01010 PF01367 5'-3' exonuclease, C-terminal SAM fold DK92_RS01010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DK92_RS01010 PF00476 DNA polymerase family A DK92_RS01020 PF01475 Ferric uptake regulator family DK92_RS01030 PF11922 Domain of unknown function (DUF3440) DK92_RS01030 PF01507 Phosphoadenosine phosphosulfate reductase family DK92_RS01035 PF02195 ParB-like nuclease domain DK92_RS01045 PF13276 HTH-like domain DK92_RS01045 PF00665 Integrase core domain DK92_RS01045 PF13333 Integrase core domain DK92_RS01050 PF13276 HTH-like domain DK92_RS01050 PF00665 Integrase core domain DK92_RS01050 PF13333 Integrase core domain DK92_RS01055 PF13276 HTH-like domain DK92_RS01055 PF13333 Integrase core domain DK92_RS01055 PF00665 Integrase core domain DK92_RS01070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DK92_RS01070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DK92_RS01075 PF13276 HTH-like domain DK92_RS01075 PF00665 Integrase core domain DK92_RS01075 PF13333 Integrase core domain DK92_RS01085 PF01702 Queuine tRNA-ribosyltransferase DK92_RS01090 PF02632 BioY family DK92_RS01095 PF12706 Beta-lactamase superfamily domain DK92_RS01100 PF14437 MafB19-like deaminase DK92_RS01110 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DK92_RS01110 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK92_RS01115 PF00342 Phosphoglucose isomerase DK92_RS01125 PF01609 Transposase DDE domain DK92_RS01125 PF13808 DDE_Tnp_1-associated DK92_RS01135 PF01694 Rhomboid family DK92_RS01140 PF00483 Nucleotidyl transferase DK92_RS01145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DK92_RS01145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DK92_RS01155 PF00664 ABC transporter transmembrane region DK92_RS01155 PF00005 ABC transporter DK92_RS01160 PF00005 ABC transporter DK92_RS01160 PF00664 ABC transporter transmembrane region DK92_RS01165 PF02677 Epoxyqueuosine reductase QueH DK92_RS01170 PF00692 dUTPase DK92_RS01175 PF18073 Rubredoxin metal binding domain DK92_RS01180 PF00484 Carbonic anhydrase DK92_RS01185 PF01987 Mitochondrial biogenesis AIM24 DK92_RS01190 PF00749 tRNA synthetases class I (E and Q), catalytic domain DK92_RS01195 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DK92_RS01195 PF17203 Single cache domain 3 DK92_RS01195 PF00989 PAS fold DK92_RS01195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS01210 PF00825 Ribonuclease P DK92_RS01215 PF02096 60Kd inner membrane protein DK92_RS01220 PF01424 R3H domain DK92_RS01220 PF14804 Jag N-terminus DK92_RS01225 PF00468 Ribosomal protein L34 DK92_RS01230 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DK92_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS01245 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS01260 PF00701 Dihydrodipicolinate synthetase family DK92_RS01265 PF00480 ROK family DK92_RS01275 PF01026 TatD related DNase DK92_RS01280 PF13331 Domain of unknown function (DUF4093) DK92_RS01285 PF00398 Ribosomal RNA adenine dimethylase DK92_RS01290 PF16745 RsgA N-terminal domain DK92_RS01290 PF03193 RsgA GTPase DK92_RS01295 PF00834 Ribulose-phosphate 3 epimerase family DK92_RS01300 PF04263 Thiamin pyrophosphokinase, catalytic domain DK92_RS01300 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DK92_RS01305 PF02646 RmuC family DK92_RS01310 PF01966 HD domain DK92_RS01315 PF09182 Bacterial purine repressor, N-terminal DK92_RS01315 PF00156 Phosphoribosyl transferase domain DK92_RS01325 PF00164 Ribosomal protein S12/S23 DK92_RS01330 PF00177 Ribosomal protein S7p/S5e DK92_RS01335 PF14492 Elongation Factor G, domain II DK92_RS01335 PF00679 Elongation factor G C-terminus DK92_RS01335 PF03764 Elongation factor G, domain IV DK92_RS01335 PF00009 Elongation factor Tu GTP binding domain DK92_RS01335 PF03144 Elongation factor Tu domain 2 DK92_RS01340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK92_RS01340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DK92_RS01345 PF00005 ABC transporter DK92_RS01350 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS01360 PF02673 Bacitracin resistance protein BacA DK92_RS01365 PF05389 Negative regulator of genetic competence (MecA) DK92_RS01370 PF00953 Glycosyl transferase family 4 DK92_RS01375 PF00005 ABC transporter DK92_RS01380 PF01458 Uncharacterized protein family (UPF0051) DK92_RS01385 PF00266 Aminotransferase class-V DK92_RS01390 PF01592 NifU-like N terminal domain DK92_RS01395 PF01458 Uncharacterized protein family (UPF0051) DK92_RS01400 PF00768 D-alanyl-D-alanine carboxypeptidase DK92_RS01400 PF07943 Penicillin-binding protein 5, C-terminal domain DK92_RS01405 PF07943 Penicillin-binding protein 5, C-terminal domain DK92_RS01405 PF00768 D-alanyl-D-alanine carboxypeptidase DK92_RS01410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK92_RS01415 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS01420 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS01420 PF12911 N-terminal TM domain of oligopeptide transport permease C DK92_RS01425 PF00005 ABC transporter DK92_RS01425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK92_RS01430 PF00005 ABC transporter DK92_RS01430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DK92_RS01475 PF01416 tRNA pseudouridine synthase DK92_RS01480 PF08543 Phosphomethylpyrimidine kinase DK92_RS01485 PF07155 ECF-type riboflavin transporter, S component DK92_RS01490 PF04260 Protein of unknown function (DUF436) DK92_RS01495 PF00924 Mechanosensitive ion channel DK92_RS01500 PF05697 Bacterial trigger factor protein (TF) DK92_RS01500 PF05698 Bacterial trigger factor protein (TF) C-terminus DK92_RS01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DK92_RS01505 PF05066 HB1, ASXL, restriction endonuclease HTH domain DK92_RS01510 PF06418 CTP synthase N-terminus DK92_RS01510 PF00117 Glutamine amidotransferase class-I DK92_RS01525 PF01116 Fructose-bisphosphate aldolase class-II DK92_RS01530 PF00830 Ribosomal L28 family DK92_RS01535 PF03780 Asp23 family, cell envelope-related function DK92_RS01540 PF13684 Dihydroxyacetone kinase family DK92_RS01540 PF02734 DAK2 domain DK92_RS01550 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DK92_RS01555 PF00162 Phosphoglycerate kinase DK92_RS01565 PF13411 MerR HTH family regulatory protein DK92_RS01570 PF03951 Glutamine synthetase, beta-Grasp domain DK92_RS01570 PF00120 Glutamine synthetase, catalytic domain DK92_RS01575 PF00753 Metallo-beta-lactamase superfamily DK92_RS01575 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DK92_RS01575 PF17770 Ribonuclease J C-terminal domain DK92_RS01580 PF07288 Protein of unknown function (DUF1447) DK92_RS01585 PF00814 Glycoprotease family DK92_RS01590 PF00583 Acetyltransferase (GNAT) family DK92_RS01595 PF00814 Glycoprotease family DK92_RS01600 PF00253 Ribosomal protein S14p/S29e DK92_RS01610 PF01048 Phosphorylase superfamily DK92_RS01615 PF07670 Nucleoside recognition DK92_RS01615 PF07662 Na+ dependent nucleoside transporter C-terminus DK92_RS01615 PF01773 Na+ dependent nucleoside transporter N-terminus DK92_RS01620 PF01791 DeoC/LacD family aldolase DK92_RS01640 PF00005 ABC transporter DK92_RS01640 PF02687 FtsX-like permease family DK92_RS01640 PF12704 MacB-like periplasmic core domain DK92_RS01650 PF04394 Protein of unknown function, DUF536 DK92_RS01650 PF08279 HTH domain DK92_RS01655 PF14579 Helix-hairpin-helix motif DK92_RS01655 PF02811 PHP domain DK92_RS01655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DK92_RS01655 PF01336 OB-fold nucleic acid binding domain DK92_RS01655 PF07733 Bacterial DNA polymerase III alpha NTPase domain DK92_RS01655 PF11490 DNA polymerase III polC-type N-terminus II DK92_RS01655 PF00929 Exonuclease DK92_RS01660 PF13411 MerR HTH family regulatory protein DK92_RS01660 PF07739 TipAS antibiotic-recognition domain DK92_RS01665 PF02575 YbaB/EbfC DNA-binding family DK92_RS01680 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DK92_RS01680 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DK92_RS01680 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DK92_RS01685 PF13545 Crp-like helix-turn-helix domain DK92_RS01690 PF07690 Major Facilitator Superfamily DK92_RS01695 PF00230 Major intrinsic protein DK92_RS01715 PF01228 Glycine radical DK92_RS01715 PF02901 Pyruvate formate lyase-like DK92_RS01720 PF00817 impB/mucB/samB family DK92_RS01720 PF11799 impB/mucB/samB family C-terminal domain DK92_RS01720 PF11798 IMS family HHH motif DK92_RS01730 PF13538 UvrD-like helicase C-terminal domain DK92_RS01730 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DK92_RS01730 PF14490 Helix-hairpin-helix containing domain DK92_RS01735 PF10502 Signal peptidase, peptidase S26 DK92_RS01740 PF11858 Domain of unknown function (DUF3378) DK92_RS01740 PF01351 Ribonuclease HII DK92_RS01755 PF00488 MutS domain V DK92_RS01755 PF01713 Smr domain DK92_RS01765 PF00085 Thioredoxin DK92_RS01770 PF01381 Helix-turn-helix DK92_RS01775 PF14815 NUDIX domain DK92_RS01775 PF00730 HhH-GPD superfamily base excision DNA repair protein DK92_RS01785 PF01250 Ribosomal protein S6 DK92_RS01790 PF00436 Single-strand binding protein family DK92_RS01795 PF01084 Ribosomal protein S18 DK92_RS01810 PF17760 UvrA interaction domain DK92_RS01810 PF17755 UvrA DNA-binding domain DK92_RS01810 PF00005 ABC transporter DK92_RS01815 PF00557 Metallopeptidase family M24 DK92_RS01815 PF01321 Creatinase/Prolidase N-terminal domain DK92_RS01820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DK92_RS01825 PF09285 Elongation factor P, C-terminal DK92_RS01825 PF08207 Elongation factor P (EF-P) KOW-like domain DK92_RS01825 PF01132 Elongation factor P (EF-P) OB domain DK92_RS01830 PF03780 Asp23 family, cell envelope-related function DK92_RS01835 PF01029 NusB family DK92_RS01840 PF00356 Bacterial regulatory proteins, lacI family DK92_RS01845 PF08244 Glycosyl hydrolases family 32 C terminal DK92_RS01845 PF00251 Glycosyl hydrolases family 32 N-terminal domain DK92_RS01850 PF02378 Phosphotransferase system, EIIC DK92_RS01850 PF00367 phosphotransferase system, EIIB DK92_RS01850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK92_RS01860 PF00480 ROK family DK92_RS01865 PF01238 Phosphomannose isomerase type I DK92_RS01870 PF13808 DDE_Tnp_1-associated DK92_RS01870 PF01609 Transposase DDE domain DK92_RS01880 PF02810 SEC-C motif DK92_RS01880 PF01043 SecA preprotein cross-linking domain DK92_RS01880 PF07516 SecA Wing and Scaffold domain DK92_RS01880 PF07517 SecA DEAD-like domain DK92_RS01885 PF01648 4'-phosphopantetheinyl transferase superfamily DK92_RS01890 PF01168 Alanine racemase, N-terminal domain DK92_RS01890 PF00842 Alanine racemase, C-terminal domain DK92_RS01895 PF05257 CHAP domain DK92_RS01895 PF01476 LysM domain DK92_RS01910 PF01497 Periplasmic binding protein DK92_RS01915 PF01032 FecCD transport family DK92_RS01920 PF00005 ABC transporter DK92_RS01925 PF00664 ABC transporter transmembrane region DK92_RS01925 PF00005 ABC transporter DK92_RS01930 PF00005 ABC transporter DK92_RS01930 PF00664 ABC transporter transmembrane region DK92_RS01945 PF00005 ABC transporter DK92_RS01950 PF00270 DEAD/DEAH box helicase DK92_RS01950 PF17191 RecG wedge domain DK92_RS01950 PF00271 Helicase conserved C-terminal domain DK92_RS01955 PF00005 ABC transporter DK92_RS01965 PF00710 Asparaginase, N-terminal DK92_RS01965 PF17763 Glutaminase/Asparaginase C-terminal domain DK92_RS01980 PF00155 Aminotransferase class I and II DK92_RS01985 PF08222 CodY helix-turn-helix domain DK92_RS01985 PF06018 CodY GAF-like domain DK92_RS01990 PF00857 Isochorismatase family DK92_RS01995 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DK92_RS01995 PF02896 PEP-utilising enzyme, TIM barrel domain DK92_RS01995 PF00391 PEP-utilising enzyme, mobile domain DK92_RS02000 PF02686 Glu-tRNAGln amidotransferase C subunit DK92_RS02005 PF01425 Amidase DK92_RS02010 PF02934 GatB/GatE catalytic domain DK92_RS02010 PF02637 GatB domain DK92_RS02020 PF04226 Transglycosylase associated protein DK92_RS02025 PF00300 Histidine phosphatase superfamily (branch 1) DK92_RS02040 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DK92_RS02040 PF01628 HrcA protein C terminal domain DK92_RS02045 PF01025 GrpE DK92_RS02050 PF00012 Hsp70 protein DK92_RS02055 PF00226 DnaJ domain DK92_RS02055 PF01556 DnaJ C terminal domain DK92_RS02055 PF00684 DnaJ central domain DK92_RS02060 PF00378 Enoyl-CoA hydratase/isomerase DK92_RS02070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DK92_RS02070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DK92_RS02075 PF00550 Phosphopantetheine attachment site DK92_RS02080 PF03060 Nitronate monooxygenase DK92_RS02085 PF00698 Acyl transferase domain DK92_RS02095 PF02801 Beta-ketoacyl synthase, C-terminal domain DK92_RS02095 PF00109 Beta-ketoacyl synthase, N-terminal domain DK92_RS02100 PF00364 Biotin-requiring enzyme DK92_RS02105 PF07977 FabA-like domain DK92_RS02110 PF02785 Biotin carboxylase C-terminal domain DK92_RS02110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DK92_RS02110 PF00289 Biotin carboxylase, N-terminal domain DK92_RS02115 PF17848 Acetyl-coA carboxylase zinc finger domain DK92_RS02115 PF01039 Carboxyl transferase domain DK92_RS02120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DK92_RS02125 PF02403 Seryl-tRNA synthetase N-terminal domain DK92_RS02125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK92_RS02135 PF03613 PTS system mannose/fructose/sorbose family IID component DK92_RS02140 PF03609 PTS system sorbose-specific iic component DK92_RS02145 PF03610 PTS system fructose IIA component DK92_RS02145 PF03830 PTS system sorbose subfamily IIB component DK92_RS02155 PF00860 Permease family DK92_RS02160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DK92_RS02170 PF03816 Cell envelope-related transcriptional attenuator domain DK92_RS02180 PF01230 HIT domain DK92_RS02185 PF00005 ABC transporter DK92_RS02190 PF05975 Bacterial ABC transporter protein EcsB DK92_RS02200 PF02390 Putative methyltransferase DK92_RS02210 PF02576 RimP N-terminal domain DK92_RS02210 PF17384 RimP C-terminal SH3 domain DK92_RS02215 PF13184 NusA-like KH domain DK92_RS02215 PF08529 NusA N-terminal domain DK92_RS02215 PF00575 S1 RNA binding domain DK92_RS02220 PF04296 Protein of unknown function (DUF448) DK92_RS02225 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DK92_RS02230 PF11987 Translation-initiation factor 2 DK92_RS02230 PF00009 Elongation factor Tu GTP binding domain DK92_RS02230 PF04760 Translation initiation factor IF-2, N-terminal region DK92_RS02235 PF02033 Ribosome-binding factor A DK92_RS02240 PF07859 alpha/beta hydrolase fold DK92_RS02245 PF03965 Penicillinase repressor DK92_RS02250 PF00403 Heavy-metal-associated domain DK92_RS02260 PF08220 DeoR-like helix-turn-helix domain DK92_RS02260 PF00455 DeoR C terminal sensor domain DK92_RS02280 PF02502 Ribose/Galactose Isomerase DK92_RS02285 PF02502 Ribose/Galactose Isomerase DK92_RS02290 PF00294 pfkB family carbohydrate kinase DK92_RS02295 PF01791 DeoC/LacD family aldolase DK92_RS02300 PF03458 UPF0126 domain DK92_RS02310 PF00440 Bacterial regulatory proteins, tetR family DK92_RS02315 PF02645 Uncharacterised protein, DegV family COG1307 DK92_RS02325 PF02690 Na+/Pi-cotransporter DK92_RS02330 PF01979 Amidohydrolase family DK92_RS02335 PF00248 Aldo/keto reductase family DK92_RS02340 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DK92_RS02345 PF02091 Glycyl-tRNA synthetase alpha subunit DK92_RS02350 PF02092 Glycyl-tRNA synthetase beta subunit DK92_RS02355 PF05979 Bacterial protein of unknown function (DUF896) DK92_RS02360 PF03413 Peptidase propeptide and YPEB domain DK92_RS02365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DK92_RS02365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DK92_RS02370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DK92_RS02370 PF01266 FAD dependent oxidoreductase DK92_RS02375 PF00230 Major intrinsic protein DK92_RS02380 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS02380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK92_RS02390 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK92_RS02395 PF02780 Transketolase, C-terminal domain DK92_RS02395 PF00456 Transketolase, thiamine diphosphate binding domain DK92_RS02395 PF02779 Transketolase, pyrimidine binding domain DK92_RS02405 PF00005 ABC transporter DK92_RS02415 PF00696 Amino acid kinase family DK92_RS02420 PF00171 Aldehyde dehydrogenase family DK92_RS02430 PF01795 MraW methylase family DK92_RS02440 PF03793 PASTA domain DK92_RS02440 PF03717 Penicillin-binding Protein dimerisation domain DK92_RS02440 PF00905 Penicillin binding protein transpeptidase domain DK92_RS02445 PF00953 Glycosyl transferase family 4 DK92_RS02445 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DK92_RS02450 PF00271 Helicase conserved C-terminal domain DK92_RS02450 PF00270 DEAD/DEAH box helicase DK92_RS02455 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS02460 PF00005 ABC transporter DK92_RS02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS02475 PF00324 Amino acid permease DK92_RS02480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DK92_RS02480 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DK92_RS02480 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DK92_RS02485 PF02540 NAD synthase DK92_RS02490 PF03051 Peptidase C1-like family DK92_RS02495 PF00905 Penicillin binding protein transpeptidase domain DK92_RS02495 PF00912 Transglycosylase DK92_RS02500 PF03838 Recombination protein U DK92_RS02505 PF06908 YspA SLOG family DK92_RS02510 PF05103 DivIVA protein DK92_RS02515 PF02926 THUMP domain DK92_RS02515 PF01170 Putative RNA methylase family UPF0020 DK92_RS02520 PF18041 MapZ extracellular domain 1 DK92_RS02520 PF18708 MapZ extracellular C-terminal domain 2 DK92_RS02525 PF02664 S-Ribosylhomocysteinase (LuxS) DK92_RS02540 PF01144 Coenzyme A transferase DK92_RS02545 PF01144 Coenzyme A transferase DK92_RS02550 PF00108 Thiolase, N-terminal domain DK92_RS02550 PF02803 Thiolase, C-terminal domain DK92_RS02560 PF12072 Domain of unknown function (DUF3552) DK92_RS02560 PF01966 HD domain DK92_RS02560 PF00013 KH domain DK92_RS02565 PF00625 Guanylate kinase DK92_RS02570 PF01192 RNA polymerase Rpb6 DK92_RS02575 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DK92_RS02575 PF04851 Type III restriction enzyme, res subunit DK92_RS02575 PF17764 3′ DNA-binding domain (3′BD) DK92_RS02575 PF00271 Helicase conserved C-terminal domain DK92_RS02575 PF18074 Primosomal protein N C-terminal domain DK92_RS02580 PF02911 Formyl transferase, C-terminal domain DK92_RS02580 PF00551 Formyl transferase DK92_RS02585 PF01189 16S rRNA methyltransferase RsmB/F DK92_RS02585 PF01029 NusB family DK92_RS02595 PF00069 Protein kinase domain DK92_RS02595 PF03793 PASTA domain DK92_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS02605 PF07730 Histidine kinase DK92_RS02605 PF00672 HAMP domain DK92_RS02610 PF00072 Response regulator receiver domain DK92_RS02610 PF00196 Bacterial regulatory proteins, luxR family DK92_RS02615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DK92_RS02620 PF00575 S1 RNA binding domain DK92_RS02625 PF00291 Pyridoxal-phosphate dependent enzyme DK92_RS02630 PF09186 Domain of unknown function (DUF1949) DK92_RS02630 PF01205 Uncharacterized protein family UPF0029 DK92_RS02635 PF04851 Type III restriction enzyme, res subunit DK92_RS02635 PF00271 Helicase conserved C-terminal domain DK92_RS02645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DK92_RS02645 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DK92_RS02705 PF04167 Protein of unknown function (DUF402) DK92_RS02710 PF02631 RecX family DK92_RS02715 PF01938 TRAM domain DK92_RS02715 PF05958 tRNA (Uracil-5-)-methyltransferase DK92_RS02725 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 DK92_RS02725 PF07748 Glycosyl hydrolases family 38 C-terminal domain DK92_RS02725 PF01074 Glycosyl hydrolases family 38 N-terminal domain DK92_RS02725 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain DK92_RS02725 PF09261 Alpha mannosidase middle domain DK92_RS02735 PF00392 Bacterial regulatory proteins, gntR family DK92_RS02740 PF02838 Glycosyl hydrolase family 20, domain 2 DK92_RS02740 PF07555 beta-N-acetylglucosaminidase DK92_RS02745 PF00232 Glycosyl hydrolase family 1 DK92_RS02750 PF00480 ROK family DK92_RS02755 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS02765 PF12010 Domain of unknown function (DUF3502) DK92_RS02775 PF00672 HAMP domain DK92_RS02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS02775 PF02743 Cache domain DK92_RS02775 PF06580 Histidine kinase DK92_RS02780 PF12833 Helix-turn-helix domain DK92_RS02780 PF00072 Response regulator receiver domain DK92_RS02785 PF16355 Domain of unknown function (DUF4982) DK92_RS02785 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DK92_RS02785 PF00703 Glycosyl hydrolases family 2 DK92_RS02785 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DK92_RS02785 PF02837 Glycosyl hydrolases family 2, sugar binding domain DK92_RS02790 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DK92_RS02790 PF08501 Shikimate dehydrogenase substrate binding domain DK92_RS02795 PF13649 Methyltransferase domain DK92_RS02810 PF01761 3-dehydroquinate synthase DK92_RS02815 PF00793 DAHP synthetase I family DK92_RS02815 PF01817 Chorismate mutase type II DK92_RS02845 PF10458 Valyl tRNA synthetase tRNA binding arm DK92_RS02845 PF08264 Anticodon-binding domain of tRNA DK92_RS02845 PF00133 tRNA synthetases class I (I, L, M and V) DK92_RS02875 PF01867 CRISPR associated protein Cas1 DK92_RS02880 PF09827 CRISPR associated protein Cas2 DK92_RS02885 PF02683 Cytochrome C biogenesis protein transmembrane region DK92_RS02890 PF08534 Redoxin DK92_RS02895 PF01625 Peptide methionine sulfoxide reductase DK92_RS02895 PF01641 SelR domain DK92_RS02900 PF00072 Response regulator receiver domain DK92_RS02900 PF12833 Helix-turn-helix domain DK92_RS02905 PF00672 HAMP domain DK92_RS02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS02905 PF06580 Histidine kinase DK92_RS02905 PF02743 Cache domain DK92_RS02920 PF02863 Arginine repressor, C-terminal domain DK92_RS02920 PF01316 Arginine repressor, DNA binding domain DK92_RS02935 PF13673 Acetyltransferase (GNAT) domain DK92_RS02940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK92_RS02940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK92_RS02945 PF03606 C4-dicarboxylate anaerobic carrier DK92_RS02950 PF01546 Peptidase family M20/M25/M40 DK92_RS02955 PF00696 Amino acid kinase family DK92_RS02960 PF03590 Aspartate-ammonia ligase DK92_RS02970 PF01467 Cytidylyltransferase-like DK92_RS02975 PF05362 Lon protease (S16) C-terminal proteolytic domain DK92_RS02975 PF13180 PDZ domain DK92_RS02980 PF00356 Bacterial regulatory proteins, lacI family DK92_RS02985 PF06265 Protein of unknown function (DUF1027) DK92_RS02990 PF04055 Radical SAM superfamily DK92_RS03000 PF00210 Ferritin-like domain DK92_RS03010 PF00480 ROK family DK92_RS03015 PF00581 Rhodanese-like domain DK92_RS03020 PF00009 Elongation factor Tu GTP binding domain DK92_RS03020 PF03144 Elongation factor Tu domain 2 DK92_RS03020 PF14492 Elongation Factor G, domain II DK92_RS03020 PF00679 Elongation factor G C-terminus DK92_RS03030 PF08245 Mur ligase middle domain DK92_RS03030 PF02875 Mur ligase family, glutamate ligase domain DK92_RS03035 PF04101 Glycosyltransferase family 28 C-terminal domain DK92_RS03035 PF03033 Glycosyltransferase family 28 N-terminal domain DK92_RS03040 PF08478 POTRA domain, FtsQ-type DK92_RS03045 PF02491 SHS2 domain inserted in FTSA DK92_RS03045 PF11983 Membrane-attachment and polymerisation-promoting switch DK92_RS03050 PF12327 FtsZ family, C-terminal domain DK92_RS03050 PF00091 Tubulin/FtsZ family, GTPase domain DK92_RS03055 PF01168 Alanine racemase, N-terminal domain DK92_RS03060 PF04472 Cell division protein SepF DK92_RS03070 PF01479 S4 domain DK92_RS03070 PF17774 Putative RNA-binding domain in YlmH DK92_RS03075 PF05103 DivIVA protein DK92_RS03080 PF00133 tRNA synthetases class I (I, L, M and V) DK92_RS03080 PF08264 Anticodon-binding domain of tRNA DK92_RS03090 PF00293 NUDIX domain DK92_RS03095 PF10431 C-terminal, D2-small domain, of ClpB protein DK92_RS03095 PF07724 AAA domain (Cdc48 subfamily) DK92_RS03095 PF17871 AAA lid domain DK92_RS03095 PF00004 ATPase family associated with various cellular activities (AAA) DK92_RS03100 PF08796 Protein of unknown function (DUF1797) DK92_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS03110 PF00005 ABC transporter DK92_RS03115 PF00875 DNA photolyase DK92_RS03115 PF03441 FAD binding domain of DNA photolyase DK92_RS03120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK92_RS03120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK92_RS03120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK92_RS03120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK92_RS03125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DK92_RS03125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DK92_RS03130 PF13742 OB-fold nucleic acid binding domain DK92_RS03130 PF02601 Exonuclease VII, large subunit DK92_RS03135 PF02609 Exonuclease VII small subunit DK92_RS03140 PF00348 Polyprenyl synthetase DK92_RS03145 PF01479 S4 domain DK92_RS03145 PF01728 FtsJ-like methyltransferase DK92_RS03150 PF02863 Arginine repressor, C-terminal domain DK92_RS03150 PF01316 Arginine repressor, DNA binding domain DK92_RS03155 PF13476 AAA domain DK92_RS03165 PF02645 Uncharacterised protein, DegV family COG1307 DK92_RS03170 PF13472 GDSL-like Lipase/Acylhydrolase family DK92_RS03180 PF00216 Bacterial DNA-binding protein DK92_RS03190 PF01180 Dihydroorotate dehydrogenase DK92_RS03195 PF00300 Histidine phosphatase superfamily (branch 1) DK92_RS03200 PF02829 3H domain DK92_RS03200 PF08279 HTH domain DK92_RS03210 PF01226 Formate/nitrite transporter DK92_RS03215 PF02132 RecR protein DK92_RS03215 PF13662 Toprim domain DK92_RS03220 PF07478 D-ala D-ala ligase C-terminus DK92_RS03220 PF01820 D-ala D-ala ligase N-terminus DK92_RS03225 PF01225 Mur ligase family, catalytic domain DK92_RS03225 PF02875 Mur ligase family, glutamate ligase domain DK92_RS03225 PF08245 Mur ligase middle domain DK92_RS03235 PF16658 Class II release factor RF3, C-terminal domain DK92_RS03235 PF03144 Elongation factor Tu domain 2 DK92_RS03235 PF00009 Elongation factor Tu GTP binding domain DK92_RS03240 PF00271 Helicase conserved C-terminal domain DK92_RS03240 PF00270 DEAD/DEAH box helicase DK92_RS03245 PF02705 K+ potassium transporter DK92_RS03250 PF01541 GIY-YIG catalytic domain DK92_RS03255 PF05175 Methyltransferase small domain DK92_RS03260 PF01553 Acyltransferase DK92_RS03265 PF10531 SLBB domain DK92_RS03270 PF03772 Competence protein DK92_RS03270 PF13567 Domain of unknown function (DUF4131) DK92_RS03270 PF00753 Metallo-beta-lactamase superfamily DK92_RS03280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DK92_RS03280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DK92_RS03305 PF02547 Queuosine biosynthesis protein DK92_RS03310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DK92_RS03315 PF00849 RNA pseudouridylate synthase DK92_RS03315 PF01479 S4 domain DK92_RS03325 PF08439 Oligopeptidase F DK92_RS03325 PF01432 Peptidase family M3 DK92_RS03330 PF07690 Major Facilitator Superfamily DK92_RS03335 PF01596 O-methyltransferase DK92_RS03340 PF13145 PPIC-type PPIASE domain DK92_RS03345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DK92_RS03345 PF02272 DHHA1 domain DK92_RS03345 PF01411 tRNA synthetases class II (A) DK92_RS03350 PF01381 Helix-turn-helix DK92_RS03365 PF13276 HTH-like domain DK92_RS03365 PF00665 Integrase core domain DK92_RS03365 PF13333 Integrase core domain DK92_RS03370 PF13333 Integrase core domain DK92_RS03370 PF00665 Integrase core domain DK92_RS03370 PF13276 HTH-like domain DK92_RS03385 PF00268 Ribonucleotide reductase, small chain DK92_RS03390 PF02867 Ribonucleotide reductase, barrel domain DK92_RS03390 PF00317 Ribonucleotide reductase, all-alpha domain DK92_RS03390 PF08343 Ribonucleotide reductase N-terminal DK92_RS03395 PF00462 Glutaredoxin DK92_RS03400 PF00381 PTS HPr component phosphorylation site DK92_RS03405 PF05524 PEP-utilising enzyme, N-terminal DK92_RS03405 PF00391 PEP-utilising enzyme, mobile domain DK92_RS03405 PF02896 PEP-utilising enzyme, TIM barrel domain DK92_RS03410 PF00171 Aldehyde dehydrogenase family DK92_RS03415 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DK92_RS03415 PF01522 Polysaccharide deacetylase DK92_RS03420 PF00271 Helicase conserved C-terminal domain DK92_RS03420 PF00270 DEAD/DEAH box helicase DK92_RS03425 PF00485 Phosphoribulokinase / Uridine kinase family DK92_RS03440 PF13185 GAF domain DK92_RS03445 PF12169 DNA polymerase III subunits gamma and tau domain III DK92_RS03450 PF08279 HTH domain DK92_RS03450 PF03099 Biotin/lipoate A/B protein ligase family DK92_RS03450 PF02237 Biotin protein ligase C terminal domain DK92_RS03460 PF02773 S-adenosylmethionine synthetase, C-terminal domain DK92_RS03460 PF00438 S-adenosylmethionine synthetase, N-terminal domain DK92_RS03460 PF02772 S-adenosylmethionine synthetase, central domain DK92_RS03465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK92_RS03470 PF01378 B domain DK92_RS03470 PF00746 LPXTG cell wall anchor motif DK92_RS03470 PF17573 GA-like domain DK92_RS03470 PF17573 GA-like domain DK92_RS03470 PF00746 LPXTG cell wall anchor motif DK92_RS03470 PF01378 B domain DK92_RS03480 PF00392 Bacterial regulatory proteins, gntR family DK92_RS03480 PF07085 DRTGG domain DK92_RS03480 PF03061 Thioesterase superfamily DK92_RS03480 PF00571 CBS domain DK92_RS03485 PF00557 Metallopeptidase family M24 DK92_RS03495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK92_RS03500 PF01202 Shikimate kinase DK92_RS03505 PF03816 Cell envelope-related transcriptional attenuator domain DK92_RS03510 PF01938 TRAM domain DK92_RS03510 PF05958 tRNA (Uracil-5-)-methyltransferase DK92_RS03525 PF08903 Domain of unknown function (DUF1846) DK92_RS03530 PF07690 Major Facilitator Superfamily DK92_RS03540 PF01479 S4 domain DK92_RS03540 PF00849 RNA pseudouridylate synthase DK92_RS03545 PF13276 HTH-like domain DK92_RS03545 PF13333 Integrase core domain DK92_RS03545 PF00665 Integrase core domain DK92_RS03550 PF09269 Domain of unknown function (DUF1967) DK92_RS03550 PF01018 GTP1/OBG DK92_RS03550 PF01926 50S ribosome-binding GTPase DK92_RS03565 PF00232 Glycosyl hydrolase family 1 DK92_RS03575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK92_RS03575 PF00874 PRD domain DK92_RS03575 PF05043 Mga helix-turn-helix domain DK92_RS03575 PF08279 HTH domain DK92_RS03580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS03585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK92_RS03595 PF02378 Phosphotransferase system, EIIC DK92_RS03600 PF00005 ABC transporter DK92_RS03605 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK92_RS03610 PF00271 Helicase conserved C-terminal domain DK92_RS03610 PF02151 UvrB/uvrC motif DK92_RS03610 PF12344 Ultra-violet resistance protein B DK92_RS03610 PF17757 UvrB interaction domain DK92_RS03610 PF04851 Type III restriction enzyme, res subunit DK92_RS03620 PF13193 AMP-binding enzyme C-terminal domain DK92_RS03620 PF00501 AMP-binding enzyme DK92_RS03625 PF03062 MBOAT, membrane-bound O-acyltransferase family DK92_RS03630 PF00550 Phosphopantetheine attachment site DK92_RS03635 PF04914 DltD protein DK92_RS03640 PF00934 PE family DK92_RS03640 PF07859 alpha/beta hydrolase fold DK92_RS03655 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS03660 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS03665 PF13416 Bacterial extracellular solute-binding protein DK92_RS03670 PF00356 Bacterial regulatory proteins, lacI family DK92_RS03670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DK92_RS03675 PF02446 4-alpha-glucanotransferase DK92_RS03680 PF00343 Carbohydrate phosphorylase DK92_RS03700 PF00005 ABC transporter DK92_RS03705 PF00392 Bacterial regulatory proteins, gntR family DK92_RS03710 PF14579 Helix-hairpin-helix motif DK92_RS03710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DK92_RS03710 PF07733 Bacterial DNA polymerase III alpha NTPase domain DK92_RS03710 PF02811 PHP domain DK92_RS03710 PF01336 OB-fold nucleic acid binding domain DK92_RS03715 PF00365 Phosphofructokinase DK92_RS03720 PF02887 Pyruvate kinase, alpha/beta domain DK92_RS03720 PF00224 Pyruvate kinase, barrel domain DK92_RS03725 PF10502 Signal peptidase, peptidase S26 DK92_RS03730 PF01380 SIS domain DK92_RS03735 PF08274 PhnA Zinc-Ribbon DK92_RS03735 PF03831 PhnA domain DK92_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS03745 PF00005 ABC transporter DK92_RS03750 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK92_RS03755 PF07373 CAMP factor (Cfa) DK92_RS03760 PF01545 Cation efflux family DK92_RS03760 PF16916 Dimerisation domain of Zinc Transporter DK92_RS03765 PF01235 Sodium:alanine symporter family DK92_RS03770 PF13361 UvrD-like helicase C-terminal domain DK92_RS03770 PF00580 UvrD/REP helicase N-terminal domain DK92_RS03790 PF03780 Asp23 family, cell envelope-related function DK92_RS03795 PF05532 CsbD-like DK92_RS03800 PF03780 Asp23 family, cell envelope-related function DK92_RS03815 PF00005 ABC transporter DK92_RS03815 PF02687 FtsX-like permease family DK92_RS03815 PF12704 MacB-like periplasmic core domain DK92_RS03840 PF16198 tRNA pseudouridylate synthase B C-terminal domain DK92_RS03840 PF01509 TruB family pseudouridylate synthase (N terminal domain) DK92_RS03845 PF06574 FAD synthetase DK92_RS03845 PF01687 Riboflavin kinase DK92_RS03850 PF03960 ArsC family DK92_RS03855 PF05256 Uncharacterised protein family (UPF0223) DK92_RS03860 PF00459 Inositol monophosphatase family DK92_RS03865 PF01189 16S rRNA methyltransferase RsmB/F DK92_RS03865 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DK92_RS03865 PF17126 RsmF rRNA methyltransferase first C-terminal domain DK92_RS03870 PF12849 PBP superfamily domain DK92_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS03885 PF00005 ABC transporter DK92_RS03890 PF00005 ABC transporter DK92_RS03895 PF01895 PhoU domain DK92_RS03900 PF11838 ERAP1-like C-terminal domain DK92_RS03900 PF01433 Peptidase family M1 domain DK92_RS03905 PF00072 Response regulator receiver domain DK92_RS03905 PF00486 Transcriptional regulatory protein, C terminal DK92_RS03910 PF00512 His Kinase A (phospho-acceptor) domain DK92_RS03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS03915 PF01649 Ribosomal protein S20 DK92_RS03920 PF00485 Phosphoribulokinase / Uridine kinase family DK92_RS03925 PF05175 Methyltransferase small domain DK92_RS03930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DK92_RS03935 PF02608 ABC transporter substrate-binding protein PnrA-like DK92_RS03940 PF00005 ABC transporter DK92_RS03945 PF02653 Branched-chain amino acid transport system / permease component DK92_RS03950 PF02653 Branched-chain amino acid transport system / permease component DK92_RS03955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK92_RS03955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK92_RS03955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK92_RS03955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK92_RS03960 PF12822 ECF transporter, substrate-specific component DK92_RS03965 PF02441 Flavoprotein DK92_RS03970 PF02441 Flavoprotein DK92_RS03970 PF04127 DNA / pantothenate metabolism flavoprotein DK92_RS03975 PF03099 Biotin/lipoate A/B protein ligase family DK92_RS03980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DK92_RS03985 PF00296 Luciferase-like monooxygenase DK92_RS03990 PF01597 Glycine cleavage H-protein DK92_RS03995 PF01661 Macro domain DK92_RS04005 PF10437 Bacterial lipoate protein ligase C-terminus DK92_RS04005 PF03099 Biotin/lipoate A/B protein ligase family DK92_RS04010 PF01268 Formate--tetrahydrofolate ligase DK92_RS04015 PF13091 PLD-like domain DK92_RS04020 PF13597 Anaerobic ribonucleoside-triphosphate reductase DK92_RS04020 PF03477 ATP cone domain DK92_RS04025 PF00392 Bacterial regulatory proteins, gntR family DK92_RS04025 PF00155 Aminotransferase class I and II DK92_RS04030 PF08543 Phosphomethylpyrimidine kinase DK92_RS04030 PF02581 Thiamine monophosphate synthase DK92_RS04040 PF12848 ABC transporter DK92_RS04040 PF00005 ABC transporter DK92_RS04050 PF02540 NAD synthase DK92_RS04050 PF00958 GMP synthase C terminal domain DK92_RS04050 PF00117 Glutamine amidotransferase class-I DK92_RS04060 PF00392 Bacterial regulatory proteins, gntR family DK92_RS04060 PF07702 UTRA domain DK92_RS04065 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DK92_RS04070 PF02978 Signal peptide binding domain DK92_RS04070 PF02881 SRP54-type protein, helical bundle domain DK92_RS04070 PF00448 SRP54-type protein, GTPase domain DK92_RS04080 PF00589 Phage integrase family DK92_RS04080 PF13495 Phage integrase, N-terminal SAM-like domain DK92_RS04090 PF08218 Citrate lyase ligase C-terminal domain DK92_RS04095 PF02436 Conserved carboxylase domain DK92_RS04095 PF00364 Biotin-requiring enzyme DK92_RS04095 PF00682 HMGL-like DK92_RS04100 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DK92_RS04105 PF04223 Citrate lyase, alpha subunit (CitF) DK92_RS04110 PF03328 HpcH/HpaI aldolase/citrate lyase family DK92_RS04115 PF06857 Malonate decarboxylase delta subunit (MdcD) DK92_RS04125 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DK92_RS04130 PF00364 Biotin-requiring enzyme DK92_RS04140 PF03600 Citrate transporter DK92_RS04150 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DK92_RS04155 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DK92_RS04160 PF00364 Biotin-requiring enzyme DK92_RS04170 PF00364 Biotin-requiring enzyme DK92_RS04170 PF00682 HMGL-like DK92_RS04170 PF02436 Conserved carboxylase domain DK92_RS04175 PF01134 Glucose inhibited division protein A DK92_RS04190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DK92_RS04190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DK92_RS04205 PF01131 DNA topoisomerase DK92_RS04205 PF01751 Toprim domain DK92_RS04205 PF01396 Topoisomerase DNA binding C4 zinc finger DK92_RS04210 PF02481 DNA recombination-mediator protein A DK92_RS04210 PF18255 DNA processing protein A sterile alpha motif domain DK92_RS04215 PF01351 Ribonuclease HII DK92_RS04220 PF01926 50S ribosome-binding GTPase DK92_RS04230 PF03006 Haemolysin-III related DK92_RS04245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK92_RS04250 PF04203 Sortase domain DK92_RS04255 PF00521 DNA gyrase/topoisomerase IV, subunit A DK92_RS04255 PF03989 DNA gyrase C-terminal domain, beta-propeller DK92_RS04260 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DK92_RS04260 PF00056 lactate/malate dehydrogenase, NAD binding domain DK92_RS04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS04265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK92_RS04270 PF00005 ABC transporter DK92_RS04270 PF00664 ABC transporter transmembrane region DK92_RS04275 PF00005 ABC transporter DK92_RS04275 PF00664 ABC transporter transmembrane region DK92_RS04290 PF00464 Serine hydroxymethyltransferase DK92_RS04305 PF05175 Methyltransferase small domain DK92_RS04310 PF03462 PCRF domain DK92_RS04310 PF00472 RF-1 domain DK92_RS04315 PF00265 Thymidine kinase DK92_RS04320 PF01361 Tautomerase enzyme DK92_RS04325 PF02424 ApbE family DK92_RS04330 PF00860 Permease family DK92_RS04335 PF00156 Phosphoribosyl transferase domain DK92_RS04340 PF00478 IMP dehydrogenase / GMP reductase domain DK92_RS04345 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS04350 PF00005 ABC transporter DK92_RS04350 PF00571 CBS domain DK92_RS04360 PF00106 short chain dehydrogenase DK92_RS04365 PF01515 Phosphate acetyl/butaryl transferase DK92_RS04370 PF01479 S4 domain DK92_RS04370 PF00849 RNA pseudouridylate synthase DK92_RS04375 PF01513 ATP-NAD kinase DK92_RS04380 PF04607 Region found in RelA / SpoT proteins DK92_RS04390 PF14572 Phosphoribosyl synthetase-associated domain DK92_RS04390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DK92_RS04395 PF00266 Aminotransferase class-V DK92_RS04405 PF02629 CoA binding domain DK92_RS04405 PF06971 Putative DNA-binding protein N-terminus DK92_RS04410 PF07722 Peptidase C26 DK92_RS04415 PF04002 RadC-like JAB domain DK92_RS04420 PF01594 AI-2E family transporter DK92_RS04430 PF00654 Voltage gated chloride channel DK92_RS04435 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DK92_RS04445 PF03949 Malic enzyme, NAD binding domain DK92_RS04445 PF00390 Malic enzyme, N-terminal domain DK92_RS04450 PF03390 2-hydroxycarboxylate transporter family DK92_RS04455 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DK92_RS04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS04455 PF00989 PAS fold DK92_RS04455 PF17203 Single cache domain 3 DK92_RS04460 PF00072 Response regulator receiver domain DK92_RS04465 PF13416 Bacterial extracellular solute-binding protein DK92_RS04470 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS04475 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS04480 PF08402 TOBE domain DK92_RS04480 PF00005 ABC transporter DK92_RS04485 PF01565 FAD binding domain DK92_RS04485 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DK92_RS04490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DK92_RS04495 PF02152 Dihydroneopterin aldolase DK92_RS04500 PF00809 Pterin binding enzyme DK92_RS04505 PF01227 GTP cyclohydrolase I DK92_RS04510 PF02875 Mur ligase family, glutamate ligase domain DK92_RS04510 PF08245 Mur ligase middle domain DK92_RS04520 PF00768 D-alanyl-D-alanine carboxypeptidase DK92_RS04520 PF07943 Penicillin-binding protein 5, C-terminal domain DK92_RS04550 PF01381 Helix-turn-helix DK92_RS04565 PF00005 ABC transporter DK92_RS04570 PF04738 Lantibiotic dehydratase, N terminus DK92_RS04570 PF14028 Lantibiotic biosynthesis dehydratase C-term DK92_RS04575 PF05147 Lanthionine synthetase C-like protein DK92_RS04580 PF00005 ABC transporter DK92_RS04590 PF00512 His Kinase A (phospho-acceptor) domain DK92_RS04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS04595 PF00486 Transcriptional regulatory protein, C terminal DK92_RS04595 PF00072 Response regulator receiver domain DK92_RS04620 PF00145 C-5 cytosine-specific DNA methylase DK92_RS04630 PF16320 Ribosomal protein L7/L12 dimerisation domain DK92_RS04630 PF00542 Ribosomal protein L7/L12 C-terminal domain DK92_RS04635 PF00466 Ribosomal protein L10 DK92_RS04640 PF10396 GTP-binding protein TrmE N-terminus DK92_RS04640 PF12631 MnmE helical domain DK92_RS04640 PF01926 50S ribosome-binding GTPase DK92_RS04645 PF01546 Peptidase family M20/M25/M40 DK92_RS04650 PF00881 Nitroreductase family DK92_RS04655 PF01541 GIY-YIG catalytic domain DK92_RS04655 PF08459 UvrC Helix-hairpin-helix N-terminal DK92_RS04655 PF02151 UvrB/uvrC motif DK92_RS04660 PF00171 Aldehyde dehydrogenase family DK92_RS04670 PF00072 Response regulator receiver domain DK92_RS04670 PF12833 Helix-turn-helix domain DK92_RS04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS04675 PF06580 Histidine kinase DK92_RS04680 PF03613 PTS system mannose/fructose/sorbose family IID component DK92_RS04685 PF03609 PTS system sorbose-specific iic component DK92_RS04690 PF03830 PTS system sorbose subfamily IIB component DK92_RS04700 PF03601 Conserved hypothetical protein 698 DK92_RS04705 PF01641 SelR domain DK92_RS04710 PF02370 M protein repeat DK92_RS04710 PF00746 LPXTG cell wall anchor motif DK92_RS04715 PF00679 Elongation factor G C-terminus DK92_RS04715 PF00009 Elongation factor Tu GTP binding domain DK92_RS04715 PF03144 Elongation factor Tu domain 2 DK92_RS04715 PF06421 GTP-binding protein LepA C-terminus DK92_RS04715 PF14492 Elongation Factor G, domain II DK92_RS04725 PF13808 DDE_Tnp_1-associated DK92_RS04725 PF01609 Transposase DDE domain DK92_RS04730 PF00334 Nucleoside diphosphate kinase DK92_RS04745 PF13344 Haloacid dehalogenase-like hydrolase DK92_RS04755 PF04055 Radical SAM superfamily DK92_RS04755 PF06969 HemN C-terminal domain DK92_RS04765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DK92_RS04765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DK92_RS04765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DK92_RS04765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DK92_RS04775 PF02457 DisA bacterial checkpoint controller nucleotide-binding DK92_RS04780 PF08245 Mur ligase middle domain DK92_RS04780 PF08353 Domain of unknown function (DUF1727) DK92_RS04785 PF07685 CobB/CobQ-like glutamine amidotransferase domain DK92_RS04790 PF03099 Biotin/lipoate A/B protein ligase family DK92_RS04790 PF10437 Bacterial lipoate protein ligase C-terminus DK92_RS04795 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DK92_RS04795 PF02278 Polysaccharide lyase family 8, super-sandwich domain DK92_RS04795 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DK92_RS04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS04800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK92_RS04810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DK92_RS04810 PF00364 Biotin-requiring enzyme DK92_RS04810 PF02817 e3 binding domain DK92_RS04815 PF00364 Biotin-requiring enzyme DK92_RS04815 PF02780 Transketolase, C-terminal domain DK92_RS04815 PF02779 Transketolase, pyrimidine binding domain DK92_RS04820 PF00676 Dehydrogenase E1 component DK92_RS04825 PF12848 ABC transporter DK92_RS04825 PF16326 ABC transporter C-terminal domain DK92_RS04825 PF00005 ABC transporter DK92_RS04835 PF00756 Putative esterase DK92_RS04840 PF17770 Ribonuclease J C-terminal domain DK92_RS04840 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DK92_RS04840 PF00753 Metallo-beta-lactamase superfamily DK92_RS04845 PF00005 ABC transporter DK92_RS04865 PF05670 NFACT protein RNA binding domain DK92_RS04875 PF01594 AI-2E family transporter DK92_RS04880 PF00293 NUDIX domain DK92_RS04885 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK92_RS04885 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DK92_RS04890 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK92_RS05015 PF04466 Phage terminase large subunit DK92_RS05015 PF17288 Terminase RNAseH like domain DK92_RS05100 PF10548 P22AR C-terminal domain DK92_RS05100 PF08346 AntA/AntB antirepressor DK92_RS05130 PF00589 Phage integrase family DK92_RS05130 PF14659 Phage integrase, N-terminal SAM-like domain DK92_RS05135 PF16363 GDP-mannose 4,6 dehydratase DK92_RS05140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DK92_RS05145 PF00483 Nucleotidyl transferase DK92_RS05150 PF01266 FAD dependent oxidoreductase DK92_RS05155 PF01784 NIF3 (NGG1p interacting factor 3) DK92_RS05160 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DK92_RS05165 PF00633 Helix-hairpin-helix motif DK92_RS05165 PF00730 HhH-GPD superfamily base excision DNA repair protein DK92_RS05165 PF10576 Iron-sulfur binding domain of endonuclease III DK92_RS05175 PF00156 Phosphoribosyl transferase domain DK92_RS05180 PF01368 DHH family DK92_RS05180 PF17768 RecJ OB domain DK92_RS05180 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DK92_RS05180 PF02272 DHHA1 domain DK92_RS05185 PF00106 short chain dehydrogenase DK92_RS05190 PF12706 Beta-lactamase superfamily domain DK92_RS05190 PF00753 Metallo-beta-lactamase superfamily DK92_RS05195 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DK92_RS05195 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DK92_RS05200 PF13167 GTP-binding GTPase N-terminal DK92_RS05200 PF16360 GTP-binding GTPase Middle Region DK92_RS05200 PF01926 50S ribosome-binding GTPase DK92_RS05220 PF12368 Rhodanase C-terminal DK92_RS05220 PF00581 Rhodanese-like domain DK92_RS05220 PF17773 UPF0176 acylphosphatase like domain DK92_RS05235 PF00575 S1 RNA binding domain DK92_RS05255 PF01063 Amino-transferase class IV DK92_RS05260 PF00521 DNA gyrase/topoisomerase IV, subunit A DK92_RS05260 PF03989 DNA gyrase C-terminal domain, beta-propeller DK92_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS05265 PF00204 DNA gyrase B DK92_RS05265 PF00986 DNA gyrase B subunit, carboxyl terminus DK92_RS05265 PF01751 Toprim domain DK92_RS05270 PF02660 Glycerol-3-phosphate acyltransferase DK92_RS05275 PF01979 Amidohydrolase family DK92_RS05280 PF03167 Uracil DNA glycosylase superfamily DK92_RS05285 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS05290 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK92_RS05295 PF01425 Amidase DK92_RS05300 PF00156 Phosphoribosyl transferase domain DK92_RS05305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DK92_RS05315 PF03466 LysR substrate binding domain DK92_RS05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK92_RS05325 PF01048 Phosphorylase superfamily DK92_RS05330 PF01048 Phosphorylase superfamily DK92_RS05335 PF03960 ArsC family DK92_RS05340 PF01676 Metalloenzyme superfamily DK92_RS05345 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DK92_RS05350 PF17871 AAA lid domain DK92_RS05350 PF07724 AAA domain (Cdc48 subfamily) DK92_RS05350 PF10431 C-terminal, D2-small domain, of ClpB protein DK92_RS05350 PF00004 ATPase family associated with various cellular activities (AAA) DK92_RS05360 PF01926 50S ribosome-binding GTPase DK92_RS05365 PF07724 AAA domain (Cdc48 subfamily) DK92_RS05365 PF10431 C-terminal, D2-small domain, of ClpB protein DK92_RS05365 PF06689 ClpX C4-type zinc finger DK92_RS05375 PF00186 Dihydrofolate reductase DK92_RS05380 PF00303 Thymidylate synthase DK92_RS05385 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DK92_RS05385 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DK92_RS05390 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DK92_RS05395 PF01070 FMN-dependent dehydrogenase DK92_RS05400 PF00288 GHMP kinases N terminal domain DK92_RS05400 PF08544 GHMP kinases C terminal DK92_RS05410 PF10509 Galactokinase galactose-binding signature DK92_RS05410 PF00288 GHMP kinases N terminal domain DK92_RS05410 PF08544 GHMP kinases C terminal DK92_RS05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS05415 PF00512 His Kinase A (phospho-acceptor) domain DK92_RS05420 PF00486 Transcriptional regulatory protein, C terminal DK92_RS05420 PF00072 Response regulator receiver domain DK92_RS05425 PF04607 Region found in RelA / SpoT proteins DK92_RS05430 PF17936 Bacterial Ig domain DK92_RS05430 PF02872 5'-nucleotidase, C-terminal domain DK92_RS05430 PF00149 Calcineurin-like phosphoesterase DK92_RS05435 PF01327 Polypeptide deformylase DK92_RS05445 PF12848 ABC transporter DK92_RS05445 PF00005 ABC transporter DK92_RS05445 PF16326 ABC transporter C-terminal domain DK92_RS05450 PF13735 tRNA nucleotidyltransferase domain 2 putative DK92_RS05450 PF01743 Poly A polymerase head domain DK92_RS05450 PF12627 Probable RNA and SrmB- binding site of polymerase A DK92_RS05455 PF02645 Uncharacterised protein, DegV family COG1307 DK92_RS05465 PF00334 Nucleoside diphosphate kinase DK92_RS05470 PF09028 Mac 1 DK92_RS05475 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK92_RS05475 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DK92_RS05480 PF13333 Integrase core domain DK92_RS05480 PF00665 Integrase core domain DK92_RS05485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK92_RS05485 PF01476 LysM domain DK92_RS05490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK92_RS05490 PF05257 CHAP domain DK92_RS05495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK92_RS05495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS05500 PF00294 pfkB family carbohydrate kinase DK92_RS05505 PF08220 DeoR-like helix-turn-helix domain DK92_RS05505 PF00455 DeoR C terminal sensor domain DK92_RS05510 PF08546 Ketopantoate reductase PanE/ApbA C terminal DK92_RS05510 PF02558 Ketopantoate reductase PanE/ApbA DK92_RS05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS05525 PF01746 tRNA (Guanine-1)-methyltransferase DK92_RS05530 PF05239 PRC-barrel domain DK92_RS05530 PF01782 RimM N-terminal domain DK92_RS05560 PF00886 Ribosomal protein S16 DK92_RS05565 PF03009 Glycerophosphoryl diester phosphodiesterase family DK92_RS05570 PF02687 FtsX-like permease family DK92_RS05570 PF12704 MacB-like periplasmic core domain DK92_RS05575 PF00005 ABC transporter DK92_RS05580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DK92_RS05585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DK92_RS05585 PF02142 MGS-like domain DK92_RS05585 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK92_RS05590 PF00117 Glutamine amidotransferase class-I DK92_RS05590 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DK92_RS05595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DK92_RS05595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DK92_RS05600 PF00860 Permease family DK92_RS05605 PF00156 Phosphoribosyl transferase domain DK92_RS05610 PF01479 S4 domain DK92_RS05610 PF00849 RNA pseudouridylate synthase DK92_RS05615 PF01252 Signal peptidase (SPase) II DK92_RS05620 PF03466 LysR substrate binding domain DK92_RS05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DK92_RS05625 PF01016 Ribosomal L27 protein DK92_RS05635 PF00829 Ribosomal prokaryotic L21 protein DK92_RS05640 PF09587 Bacterial capsule synthesis protein PGA_cap DK92_RS05645 PF02568 Thiamine biosynthesis protein (ThiI) DK92_RS05645 PF02926 THUMP domain DK92_RS05650 PF00266 Aminotransferase class-V DK92_RS05660 PF02875 Mur ligase family, glutamate ligase domain DK92_RS05660 PF08245 Mur ligase middle domain DK92_RS05665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DK92_RS05665 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS05670 PF06133 Control of competence regulator ComK, YlbF/YmcA DK92_RS05675 PF01264 Chorismate synthase DK92_RS05680 PF01487 Type I 3-dehydroquinase DK92_RS05685 PF10672 S-adenosylmethionine-dependent methyltransferase DK92_RS05685 PF17785 PUA-like domain DK92_RS05690 PF00884 Sulfatase DK92_RS05695 PF00453 Ribosomal protein L20 DK92_RS05700 PF01632 Ribosomal protein L35 DK92_RS05705 PF05198 Translation initiation factor IF-3, N-terminal domain DK92_RS05705 PF00707 Translation initiation factor IF-3, C-terminal domain DK92_RS05710 PF02224 Cytidylate kinase DK92_RS05725 PF07687 Peptidase dimerisation domain DK92_RS05725 PF01546 Peptidase family M20/M25/M40 DK92_RS05745 PF00535 Glycosyl transferase family 2 DK92_RS05760 PF00535 Glycosyl transferase family 2 DK92_RS05765 PF00005 ABC transporter DK92_RS05775 PF00535 Glycosyl transferase family 2 DK92_RS05775 PF02709 N-terminal domain of galactosyltransferase DK92_RS05785 PF04321 RmlD substrate binding domain DK92_RS05790 PF01883 Iron-sulfur cluster assembly protein DK92_RS05795 PF03979 Sigma-70 factor, region 1.1 DK92_RS05795 PF00140 Sigma-70 factor, region 1.2 DK92_RS05795 PF04542 Sigma-70 region 2 DK92_RS05795 PF04539 Sigma-70 region 3 DK92_RS05795 PF04545 Sigma-70, region 4 DK92_RS05800 PF08275 DNA primase catalytic core, N-terminal domain DK92_RS05800 PF01807 CHC2 zinc finger DK92_RS05800 PF10410 DnaB-helicase binding domain of primase DK92_RS05805 PF01741 Large-conductance mechanosensitive channel, MscL DK92_RS05810 PF01165 Ribosomal protein S21 DK92_RS05815 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK92_RS05820 PF12705 PD-(D/E)XK nuclease superfamily DK92_RS05820 PF13361 UvrD-like helicase C-terminal domain DK92_RS05820 PF00580 UvrD/REP helicase N-terminal domain DK92_RS05825 PF12705 PD-(D/E)XK nuclease superfamily DK92_RS05830 PF04228 Putative neutral zinc metallopeptidase DK92_RS05835 PF00005 ABC transporter DK92_RS05840 PF02687 FtsX-like permease family DK92_RS05855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DK92_RS05855 PF01588 Putative tRNA binding domain DK92_RS05855 PF03483 B3/4 domain DK92_RS05855 PF03147 Ferredoxin-fold anticodon binding domain DK92_RS05855 PF03484 tRNA synthetase B5 domain DK92_RS05860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DK92_RS05860 PF01409 tRNA synthetases class II core domain (F) DK92_RS05870 PF01609 Transposase DDE domain DK92_RS05870 PF13808 DDE_Tnp_1-associated DK92_RS05885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DK92_RS05895 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DK92_RS05895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DK92_RS05900 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK92_RS05900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK92_RS05905 PF00231 ATP synthase DK92_RS05910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DK92_RS05910 PF00306 ATP synthase alpha/beta chain, C terminal domain DK92_RS05910 PF02874 ATP synthase alpha/beta family, beta-barrel domain DK92_RS05915 PF00213 ATP synthase delta (OSCP) subunit DK92_RS05920 PF00430 ATP synthase B/B' CF(0) DK92_RS05925 PF00119 ATP synthase A chain DK92_RS05930 PF00137 ATP synthase subunit C DK92_RS05935 PF00781 Diacylglycerol kinase catalytic domain DK92_RS05940 PF12826 Helix-hairpin-helix motif DK92_RS05940 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DK92_RS05940 PF00533 BRCA1 C Terminus (BRCT) domain DK92_RS05940 PF01653 NAD-dependent DNA ligase adenylation domain DK92_RS05940 PF03120 NAD-dependent DNA ligase OB-fold domain DK92_RS05945 PF06177 QueT transporter DK92_RS05965 PF00005 ABC transporter DK92_RS06015 PF00113 Enolase, C-terminal TIM barrel domain DK92_RS06015 PF03952 Enolase, N-terminal domain DK92_RS06025 PF06160 Septation ring formation regulator, EzrA DK92_RS06030 PF01751 Toprim domain DK92_RS06030 PF00204 DNA gyrase B DK92_RS06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS06030 PF00986 DNA gyrase B subunit, carboxyl terminus DK92_RS06045 PF01245 Ribosomal protein L19 DK92_RS06050 PF00654 Voltage gated chloride channel DK92_RS06060 PF00258 Flavodoxin DK92_RS06065 PF02272 DHHA1 domain DK92_RS06065 PF01368 DHH family DK92_RS06070 PF01197 Ribosomal protein L31 DK92_RS06075 PF01380 SIS domain DK92_RS06080 PF00392 Bacterial regulatory proteins, gntR family DK92_RS06080 PF07702 UTRA domain DK92_RS06085 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DK92_RS06085 PF01297 Zinc-uptake complex component A periplasmic DK92_RS06090 PF03577 Peptidase family C69 DK92_RS06095 PF10298 WhiA N-terminal LAGLIDADG-like domain DK92_RS06095 PF14527 WhiA LAGLIDADG-like domain DK92_RS06095 PF02650 WhiA C-terminal HTH domain DK92_RS06100 PF01933 Uncharacterised protein family UPF0052 DK92_RS06105 PF03668 P-loop ATPase protein family DK92_RS06110 PF00152 tRNA synthetases class II (D, K and N) DK92_RS06110 PF01336 OB-fold nucleic acid binding domain DK92_RS06115 PF00155 Aminotransferase class I and II DK92_RS06120 PF13307 Helicase C-terminal domain DK92_RS06120 PF04851 Type III restriction enzyme, res subunit DK92_RS06120 PF00929 Exonuclease DK92_RS06130 PF00753 Metallo-beta-lactamase superfamily DK92_RS06135 PF18075 FtsX extracellular domain DK92_RS06135 PF02687 FtsX-like permease family DK92_RS06140 PF00005 ABC transporter DK92_RS06145 PF00472 RF-1 domain DK92_RS06145 PF03462 PCRF domain DK92_RS06150 PF08331 Domain of unknown function (DUF1730) DK92_RS06155 PF13419 Haloacid dehalogenase-like hydrolase DK92_RS06160 PF01081 KDPG and KHG aldolase DK92_RS06185 PF07470 Glycosyl Hydrolase Family 88 DK92_RS06190 PF03830 PTS system sorbose subfamily IIB component DK92_RS06195 PF03609 PTS system sorbose-specific iic component DK92_RS06200 PF03613 PTS system mannose/fructose/sorbose family IID component DK92_RS06210 PF00356 Bacterial regulatory proteins, lacI family DK92_RS06215 PF00689 Cation transporting ATPase, C-terminus DK92_RS06215 PF00690 Cation transporter/ATPase, N-terminus DK92_RS06225 PF01966 HD domain DK92_RS06250 PF00121 Triosephosphate isomerase DK92_RS06255 PF03143 Elongation factor Tu C-terminal domain DK92_RS06255 PF03144 Elongation factor Tu domain 2 DK92_RS06255 PF00009 Elongation factor Tu GTP binding domain DK92_RS06260 PF01098 Cell cycle protein DK92_RS06265 PF00311 Phosphoenolpyruvate carboxylase DK92_RS06270 PF01432 Peptidase family M3 DK92_RS06270 PF08439 Oligopeptidase F DK92_RS06275 PF00255 Glutathione peroxidase DK92_RS06295 PF09515 Thiamine transporter protein (Thia_YuaJ) DK92_RS06315 PF00152 tRNA synthetases class II (D, K and N) DK92_RS06315 PF01336 OB-fold nucleic acid binding domain DK92_RS06325 PF02229 Transcriptional Coactivator p15 (PC4) DK92_RS06330 PF01136 Peptidase family U32 DK92_RS06330 PF16325 Peptidase family U32 C-terminal domain DK92_RS06345 PF12732 YtxH-like protein DK92_RS06355 PF01790 Prolipoprotein diacylglyceryl transferase DK92_RS06360 PF02603 HPr Serine kinase N terminus DK92_RS06360 PF07475 HPr Serine kinase C-terminal domain DK92_RS06370 PF10263 SprT-like family DK92_RS06375 PF17674 HHH domain DK92_RS06375 PF00575 S1 RNA binding domain DK92_RS06375 PF09371 Tex-like protein N-terminal domain DK92_RS06375 PF16921 Tex protein YqgF-like domain DK92_RS06385 PF03773 Predicted permease DK92_RS06390 PF09323 Domain of unknown function (DUF1980) DK92_RS06395 PF00232 Glycosyl hydrolase family 1 DK92_RS06400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK92_RS06400 PF02378 Phosphotransferase system, EIIC DK92_RS06400 PF00367 phosphotransferase system, EIIB DK92_RS06405 PF03123 CAT RNA binding domain DK92_RS06405 PF00874 PRD domain DK92_RS06410 PF07690 Major Facilitator Superfamily DK92_RS06415 PF00448 SRP54-type protein, GTPase domain DK92_RS06415 PF02881 SRP54-type protein, helical bundle domain DK92_RS06430 PF13683 Integrase core domain DK92_RS06430 PF01610 Transposase DK92_RS06450 PF02016 LD-carboxypeptidase N-terminal domain DK92_RS06450 PF17676 LD-carboxypeptidase C-terminal domain DK92_RS06460 PF01336 OB-fold nucleic acid binding domain DK92_RS06460 PF00152 tRNA synthetases class II (D, K and N) DK92_RS06525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DK92_RS06525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DK92_RS06525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DK92_RS06545 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) DK92_RS06565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DK92_RS06565 PF08501 Shikimate dehydrogenase substrate binding domain DK92_RS06575 PF02463 RecF/RecN/SMC N terminal domain DK92_RS06575 PF06470 SMC proteins Flexible Hinge Domain DK92_RS06580 PF00035 Double-stranded RNA binding motif DK92_RS06580 PF14622 Ribonuclease-III-like DK92_RS06585 PF00753 Metallo-beta-lactamase superfamily DK92_RS06590 PF00672 HAMP domain DK92_RS06590 PF00512 His Kinase A (phospho-acceptor) domain DK92_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS06590 PF13426 PAS domain DK92_RS06595 PF00486 Transcriptional regulatory protein, C terminal DK92_RS06595 PF00072 Response regulator receiver domain DK92_RS06610 PF02803 Thiolase, C-terminal domain DK92_RS06610 PF00108 Thiolase, N-terminal domain DK92_RS06630 PF00005 ABC transporter DK92_RS06635 PF03129 Anticodon binding domain DK92_RS06635 PF02824 TGS domain DK92_RS06635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK92_RS06635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DK92_RS06640 PF00534 Glycosyl transferases group 1 DK92_RS06640 PF13439 Glycosyltransferase Family 4 DK92_RS06645 PF00534 Glycosyl transferases group 1 DK92_RS06645 PF13439 Glycosyltransferase Family 4 DK92_RS06650 PF00356 Bacterial regulatory proteins, lacI family DK92_RS06655 PF01321 Creatinase/Prolidase N-terminal domain DK92_RS06655 PF00557 Metallopeptidase family M24 DK92_RS06660 PF00881 Nitroreductase family DK92_RS06665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK92_RS06670 PF00535 Glycosyl transferase family 2 DK92_RS06685 PF01470 Pyroglutamyl peptidase DK92_RS06695 PF01668 SmpB protein DK92_RS06700 PF00575 S1 RNA binding domain DK92_RS06700 PF08206 Ribonuclease B OB domain DK92_RS06700 PF17876 Cold shock domain DK92_RS06700 PF00773 RNB domain DK92_RS06710 PF07690 Major Facilitator Superfamily DK92_RS06710 PF00083 Sugar (and other) transporter DK92_RS06715 PF05872 Bacterial protein of unknown function (DUF853) DK92_RS06720 PF01121 Dephospho-CoA kinase DK92_RS06725 PF06827 Zinc finger found in FPG and IleRS DK92_RS06725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DK92_RS06725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DK92_RS06780 PF13344 Haloacid dehalogenase-like hydrolase DK92_RS06780 PF00293 NUDIX domain DK92_RS06785 PF01926 50S ribosome-binding GTPase DK92_RS06785 PF07650 KH domain DK92_RS06790 PF01219 Prokaryotic diacylglycerol kinase DK92_RS06795 PF02130 Uncharacterized protein family UPF0054 DK92_RS06800 PF03167 Uracil DNA glycosylase superfamily DK92_RS06805 PF02562 PhoH-like protein DK92_RS06810 PF06100 MCRA family DK92_RS06820 PF06855 YozE SAM-like fold DK92_RS06825 PF01625 Peptide methionine sulfoxide reductase DK92_RS06835 PF01765 Ribosome recycling factor DK92_RS06840 PF00696 Amino acid kinase family DK92_RS06845 PF00687 Ribosomal protein L1p/L10e family DK92_RS06850 PF03946 Ribosomal protein L11, N-terminal domain DK92_RS06850 PF00298 Ribosomal protein L11, RNA binding domain DK92_RS06860 PF17854 FtsK alpha domain DK92_RS06860 PF09397 Ftsk gamma domain DK92_RS06860 PF01580 FtsK/SpoIIIE family DK92_RS06865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DK92_RS06870 PF00950 ABC 3 transport family DK92_RS06875 PF00005 ABC transporter DK92_RS06880 PF01297 Zinc-uptake complex component A periplasmic DK92_RS06895 PF01048 Phosphorylase superfamily DK92_RS06905 PF00293 NUDIX domain DK92_RS06910 PF12804 MobA-like NTP transferase domain DK92_RS06910 PF14602 Hexapeptide repeat of succinyl-transferase DK92_RS06910 PF00132 Bacterial transferase hexapeptide (six repeats) DK92_RS06915 PF07690 Major Facilitator Superfamily DK92_RS06920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DK92_RS06920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK92_RS06985 PF03496 ADP-ribosyltransferase exoenzyme DK92_RS06990 PF00317 Ribonucleotide reductase, all-alpha domain DK92_RS06990 PF08343 Ribonucleotide reductase N-terminal DK92_RS06990 PF02867 Ribonucleotide reductase, barrel domain DK92_RS06995 PF07972 NrdI Flavodoxin like DK92_RS07000 PF00268 Ribonucleotide reductase, small chain DK92_RS07005 PF09334 tRNA synthetases class I (M) DK92_RS07005 PF01588 Putative tRNA binding domain DK92_RS07015 PF13808 DDE_Tnp_1-associated DK92_RS07015 PF01609 Transposase DDE domain DK92_RS07030 PF00746 LPXTG cell wall anchor motif DK92_RS07030 PF02225 PA domain DK92_RS07030 PF06280 Fn3-like domain DK92_RS07030 PF00082 Subtilase family DK92_RS07035 PF01070 FMN-dependent dehydrogenase DK92_RS07040 PF03372 Endonuclease/Exonuclease/phosphatase family DK92_RS07045 PF03960 ArsC family DK92_RS07050 PF03932 CutC family DK92_RS07060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DK92_RS07065 PF06156 Initiation control protein YabA DK92_RS07075 PF09115 DNA polymerase III, delta subunit, C terminal DK92_RS07080 PF02223 Thymidylate kinase DK92_RS07085 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DK92_RS07090 PF00574 Clp protease DK92_RS07100 PF01943 Polysaccharide biosynthesis protein DK92_RS07100 PF14667 Polysaccharide biosynthesis C-terminal domain DK92_RS07105 PF02875 Mur ligase family, glutamate ligase domain DK92_RS07105 PF08245 Mur ligase middle domain DK92_RS07110 PF00005 ABC transporter DK92_RS07115 PF01497 Periplasmic binding protein DK92_RS07120 PF01032 FecCD transport family DK92_RS07125 PF01032 FecCD transport family DK92_RS07135 PF01368 DHH family DK92_RS07135 PF02833 DHHA2 domain DK92_RS07140 PF04055 Radical SAM superfamily DK92_RS07145 PF00571 CBS domain DK92_RS07145 PF03471 Transporter associated domain DK92_RS07145 PF01595 Cyclin M transmembrane N-terminal domain DK92_RS07150 PF06962 Putative rRNA methylase DK92_RS07155 PF16199 Radical_SAM C-terminal domain DK92_RS07155 PF04055 Radical SAM superfamily DK92_RS07160 PF01569 PAP2 superfamily DK92_RS07165 PF12822 ECF transporter, substrate-specific component DK92_RS07170 PF00588 SpoU rRNA Methylase family DK92_RS07175 PF01809 Putative membrane protein insertion efficiency factor DK92_RS07180 PF00849 RNA pseudouridylate synthase DK92_RS07180 PF01479 S4 domain DK92_RS07185 PF04079 Segregation and condensation complex subunit ScpB DK92_RS07190 PF02616 Segregation and condensation protein ScpA DK92_RS07210 PF01725 Ham1 family DK92_RS07215 PF01177 Asp/Glu/Hydantoin racemase DK92_RS07220 PF03672 Uncharacterised protein family (UPF0154) DK92_RS07225 PF01027 Inhibitor of apoptosis-promoting Bax1 DK92_RS07235 PF08032 RNA 2'-O ribose methyltransferase substrate binding DK92_RS07235 PF00588 SpoU rRNA Methylase family DK92_RS07240 PF00708 Acylphosphatase DK92_RS07245 PF02096 60Kd inner membrane protein DK92_RS07250 PF03449 Transcription elongation factor, N-terminal DK92_RS07250 PF01272 Transcription elongation factor, GreA/GreB, C-term DK92_RS07255 PF02618 YceG-like family DK92_RS07265 PF02875 Mur ligase family, glutamate ligase domain DK92_RS07265 PF01225 Mur ligase family, catalytic domain DK92_RS07265 PF08245 Mur ligase middle domain DK92_RS07275 PF00271 Helicase conserved C-terminal domain DK92_RS07275 PF12419 SNF2 Helicase protein DK92_RS07275 PF00176 SNF2 family N-terminal domain DK92_RS07280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DK92_RS07280 PF01926 50S ribosome-binding GTPase DK92_RS07285 PF01695 IstB-like ATP binding protein DK92_RS07285 PF07319 Primosomal protein DnaI N-terminus DK92_RS07295 PF03477 ATP cone domain DK92_RS07300 PF00512 His Kinase A (phospho-acceptor) domain DK92_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS07300 PF18719 ArlS sensor domain DK92_RS07305 PF00486 Transcriptional regulatory protein, C terminal DK92_RS07305 PF00072 Response regulator receiver domain DK92_RS07315 PF01435 Peptidase family M48 DK92_RS07320 PF04011 LemA family DK92_RS07325 PF02527 rRNA small subunit methyltransferase G DK92_RS07330 PF02386 Cation transport protein DK92_RS07335 PF02080 TrkA-C domain DK92_RS07335 PF02254 TrkA-N domain DK92_RS07340 PF00375 Sodium:dicarboxylate symporter family DK92_RS07345 PF05525 Branched-chain amino acid transport protein DK92_RS07350 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS07355 PF00005 ABC transporter DK92_RS07355 PF09383 NIL domain DK92_RS07360 PF03180 NLPA lipoprotein DK92_RS07365 PF00497 Bacterial extracellular solute-binding proteins, family 3 DK92_RS07370 PF01709 Transcriptional regulator DK92_RS07375 PF05636 HIGH Nucleotidyl Transferase DK92_RS07380 PF13649 Methyltransferase domain DK92_RS07390 PF01966 HD domain DK92_RS07395 PF01467 Cytidylyltransferase-like DK92_RS07400 PF01985 CRS1 / YhbY (CRM) domain DK92_RS07405 PF01926 50S ribosome-binding GTPase DK92_RS07455 PF18766 SWI2/SNF2 ATPase DK92_RS07455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DK92_RS07455 PF12008 Type I restriction and modification enzyme - subunit R C terminal DK92_RS07465 PF02384 N-6 DNA Methylase DK92_RS07465 PF12161 HsdM N-terminal domain DK92_RS07475 PF00072 Response regulator receiver domain DK92_RS07475 PF00486 Transcriptional regulatory protein, C terminal DK92_RS07485 PF02687 FtsX-like permease family DK92_RS07490 PF00005 ABC transporter DK92_RS07495 PF00005 ABC transporter DK92_RS07495 PF00664 ABC transporter transmembrane region DK92_RS07505 PF04604 Type-A lantibiotic DK92_RS07510 PF00232 Glycosyl hydrolase family 1 DK92_RS07515 PF02378 Phosphotransferase system, EIIC DK92_RS07515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS07520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK92_RS07525 PF01791 DeoC/LacD family aldolase DK92_RS07530 PF00294 pfkB family carbohydrate kinase DK92_RS07535 PF02502 Ribose/Galactose Isomerase DK92_RS07540 PF02502 Ribose/Galactose Isomerase DK92_RS07545 PF00455 DeoR C terminal sensor domain DK92_RS07545 PF08220 DeoR-like helix-turn-helix domain DK92_RS07560 PF00380 Ribosomal protein S9/S16 DK92_RS07565 PF00572 Ribosomal protein L13 DK92_RS07570 PF01381 Helix-turn-helix DK92_RS07580 PF02645 Uncharacterised protein, DegV family COG1307 DK92_RS07590 PF08032 RNA 2'-O ribose methyltransferase substrate binding DK92_RS07590 PF00588 SpoU rRNA Methylase family DK92_RS07600 PF00636 Ribonuclease III domain DK92_RS07605 PF09190 DALR domain DK92_RS07605 PF01406 tRNA synthetases class I (C) catalytic domain DK92_RS07615 PF00132 Bacterial transferase hexapeptide (six repeats) DK92_RS07615 PF06426 Serine acetyltransferase, N-terminal DK92_RS07625 PF00575 S1 RNA binding domain DK92_RS07625 PF01138 3' exoribonuclease family, domain 1 DK92_RS07625 PF00013 KH domain DK92_RS07625 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DK92_RS07625 PF03725 3' exoribonuclease family, domain 2 DK92_RS07630 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK92_RS07635 PF03611 PTS system sugar-specific permease component DK92_RS07640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS07645 PF05043 Mga helix-turn-helix domain DK92_RS07645 PF00874 PRD domain DK92_RS07645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DK92_RS07645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS07645 PF08279 HTH domain DK92_RS07650 PF00312 Ribosomal protein S15 DK92_RS07660 PF01327 Polypeptide deformylase DK92_RS07665 PF03358 NADPH-dependent FMN reductase DK92_RS07670 PF01047 MarR family DK92_RS07675 PF14480 DNA polymerase III polC-type N-terminus I DK92_RS07675 PF11490 DNA polymerase III polC-type N-terminus II DK92_RS07675 PF00929 Exonuclease DK92_RS07675 PF02811 PHP domain DK92_RS07675 PF14579 Helix-hairpin-helix motif DK92_RS07675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DK92_RS07675 PF07733 Bacterial DNA polymerase III alpha NTPase domain DK92_RS07680 PF04073 Aminoacyl-tRNA editing domain DK92_RS07680 PF03129 Anticodon binding domain DK92_RS07680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DK92_RS07685 PF13180 PDZ domain DK92_RS07685 PF02163 Peptidase family M50 DK92_RS07695 PF01255 Putative undecaprenyl diphosphate synthase DK92_RS07700 PF02699 Preprotein translocase subunit DK92_RS07710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DK92_RS07710 PF17999 Pullulanase N1-terminal domain DK92_RS07710 PF00128 Alpha amylase, catalytic domain DK92_RS07715 PF00128 Alpha amylase, catalytic domain DK92_RS07720 PF00005 ABC transporter DK92_RS07720 PF17912 MalK OB fold domain DK92_RS07720 PF03459 TOBE domain DK92_RS07725 PF13556 PucR C-terminal helix-turn-helix domain DK92_RS07730 PF02821 Staphylokinase/Streptokinase family DK92_RS07735 PF02580 D-Tyr-tRNA(Tyr) deacylase DK92_RS07740 PF02824 TGS domain DK92_RS07740 PF04607 Region found in RelA / SpoT proteins DK92_RS07740 PF13291 ACT domain DK92_RS07745 PF00746 LPXTG cell wall anchor motif DK92_RS07745 PF04650 YSIRK type signal peptide DK92_RS07750 PF07972 NrdI Flavodoxin like DK92_RS07755 PF03372 Endonuclease/Exonuclease/phosphatase family DK92_RS07760 PF02378 Phosphotransferase system, EIIC DK92_RS07760 PF00367 phosphotransferase system, EIIB DK92_RS07760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DK92_RS07765 PF04452 RNA methyltransferase DK92_RS07800 PF04715 Anthranilate synthase component I, N terminal region DK92_RS07800 PF00425 chorismate binding enzyme DK92_RS07805 PF00117 Glutamine amidotransferase class-I DK92_RS07810 PF05496 Holliday junction DNA helicase RuvB P-loop domain DK92_RS07810 PF12002 MgsA AAA+ ATPase C terminal DK92_RS07810 PF16193 AAA C-terminal domain DK92_RS07820 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain DK92_RS07820 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DK92_RS07830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DK92_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component DK92_RS07845 PF00005 ABC transporter DK92_RS07845 PF12558 ATP-binding cassette cobalt transporter DK92_RS07850 PF00005 ABC transporter DK92_RS07855 PF05532 CsbD-like DK92_RS07865 PF01297 Zinc-uptake complex component A periplasmic DK92_RS07875 PF01609 Transposase DDE domain DK92_RS07875 PF13808 DDE_Tnp_1-associated DK92_RS07885 PF06280 Fn3-like domain DK92_RS07885 PF02225 PA domain DK92_RS07885 PF00082 Subtilase family DK92_RS07890 PF04650 YSIRK type signal peptide DK92_RS07890 PF02370 M protein repeat DK92_RS07890 PF00746 LPXTG cell wall anchor motif DK92_RS07900 PF04650 YSIRK type signal peptide DK92_RS07900 PF02370 M protein repeat DK92_RS07900 PF00746 LPXTG cell wall anchor motif DK92_RS07905 PF04650 YSIRK type signal peptide DK92_RS07905 PF00746 LPXTG cell wall anchor motif DK92_RS07910 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DK92_RS07910 PF05043 Mga helix-turn-helix domain DK92_RS07910 PF08270 M protein trans-acting positive regulator (MGA) PRD domain DK92_RS07920 PF05257 CHAP domain DK92_RS07920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DK92_RS07925 PF02702 Osmosensitive K+ channel His kinase sensor domain DK92_RS07925 PF00512 His Kinase A (phospho-acceptor) domain DK92_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DK92_RS07925 PF13493 Domain of unknown function (DUF4118) DK92_RS07930 PF00486 Transcriptional regulatory protein, C terminal DK92_RS07930 PF00072 Response regulator receiver domain DK92_RS07935 PF02687 FtsX-like permease family DK92_RS07935 PF12704 MacB-like periplasmic core domain DK92_RS07940 PF00005 ABC transporter DK92_RS07975 PF13145 PPIC-type PPIASE domain DK92_RS07985 PF13734 Spi protease inhibitor DK92_RS07985 PF01640 Peptidase C10 family DK92_RS08000 PF04608 Phosphatidylglycerophosphatase A DK92_RS08005 PF00465 Iron-containing alcohol dehydrogenase DK92_RS08010 PF00923 Transaldolase/Fructose-6-phosphate aldolase DK92_RS08015 PF02901 Pyruvate formate lyase-like DK92_RS08015 PF01228 Glycine radical DK92_RS08020 PF02378 Phosphotransferase system, EIIC DK92_RS08025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DK92_RS08030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DK92_RS08035 PF04198 Putative sugar-binding domain DK92_RS08040 PF08220 DeoR-like helix-turn-helix domain DK92_RS08040 PF00455 DeoR C terminal sensor domain DK92_RS08045 PF04055 Radical SAM superfamily DK92_RS08055 PF00912 Transglycosylase DK92_RS08055 PF00905 Penicillin binding protein transpeptidase domain DK92_RS08070 PF01479 S4 domain DK92_RS08070 PF00849 RNA pseudouridylate synthase DK92_RS08080 PF03577 Peptidase family C69 DK92_RS08090 PF00118 TCP-1/cpn60 chaperonin family DK92_RS08095 PF00166 Chaperonin 10 Kd subunit DK92_RS08100 PF10431 C-terminal, D2-small domain, of ClpB protein DK92_RS08100 PF02861 Clp amino terminal domain, pathogenicity island component DK92_RS08100 PF17871 AAA lid domain DK92_RS08100 PF07724 AAA domain (Cdc48 subfamily) DK92_RS08100 PF00004 ATPase family associated with various cellular activities (AAA) DK92_RS08105 PF17727 CtsR C-terminal dimerization domain DK92_RS08105 PF05848 CtsR N-terminal HTH domain DK92_RS08110 PF00313 'Cold-shock' DNA-binding domain DK92_RS08120 PF00578 AhpC/TSA family DK92_RS08125 PF13192 Thioredoxin domain DK92_RS08125 PF07992 Pyridine nucleotide-disulphide oxidoreductase DK92_RS08130 PF01979 Amidohydrolase family DK92_RS08135 PF17391 Urocanase N-terminal domain DK92_RS08135 PF17392 Urocanase C-terminal domain DK92_RS08135 PF01175 Urocanase Rossmann-like domain DK92_RS08140 PF02971 Formiminotransferase domain DK92_RS08140 PF07837 Formiminotransferase domain, N-terminal subdomain DK92_RS08145 PF04961 Formiminotransferase-cyclodeaminase DK92_RS08150 PF01268 Formate--tetrahydrofolate ligase DK92_RS08160 PF13520 Amino acid permease DK92_RS08165 PF00221 Aromatic amino acid lyase DK92_RS08170 PF00491 Arginase family DK92_RS08180 PF13808 DDE_Tnp_1-associated DK92_RS08180 PF01609 Transposase DDE domain DK92_RS08190 PF00318 Ribosomal protein S2 DK92_RS08195 PF00889 Elongation factor TS DK92_RS08200 PF05649 Peptidase family M13 DK92_RS08200 PF01431 Peptidase family M13 DK92_RS08205 PF00128 Alpha amylase, catalytic domain DK92_RS08205 PF16657 Maltogenic Amylase, C-terminal domain DK92_RS08210 PF00367 phosphotransferase system, EIIB DK92_RS08210 PF02378 Phosphotransferase system, EIIC DK92_RS08215 PF00392 Bacterial regulatory proteins, gntR family DK92_RS08215 PF07702 UTRA domain DK92_RS08225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DK92_RS08230 PF03883 Peroxide stress protein YaaA DK92_RS08245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DK92_RS08250 PF13597 Anaerobic ribonucleoside-triphosphate reductase DK92_RS08250 PF03477 ATP cone domain DK92_RS08260 PF06949 Protein of unknown function (DUF1292) DK92_RS08265 PF03652 Holliday junction resolvase DK92_RS08270 PF06135 IreB regulatory phosphoprotein DK92_RS08275 PF03960 ArsC family DK92_RS08280 PF00154 recA bacterial DNA recombination protein DK92_RS08285 PF02464 Competence-damaged protein DK92_RS08285 PF18146 Damage-inducible protein CinA KH domain DK92_RS08285 PF00994 Probable molybdopterin binding domain DK92_RS08290 PF13302 Acetyltransferase (GNAT) domain DK92_RS08290 PF13673 Acetyltransferase (GNAT) domain DK92_RS08290 PF03352 Methyladenine glycosylase DK92_RS08290 PF00958 GMP synthase C terminal domain DK92_RS08290 PF00117 Glutamine amidotransferase class-I DK92_RS08295 PF07499 RuvA, C-terminal domain DK92_RS08295 PF01330 RuvA N terminal domain DK92_RS08305 PF01119 DNA mismatch repair protein, C-terminal domain DK92_RS08305 PF08676 MutL C terminal dimerisation domain DK92_RS08310 PF00589 Phage integrase family DK92_RS08310 PF14659 Phage integrase, N-terminal SAM-like domain DK92_RS08340 PF10548 P22AR C-terminal domain DK92_RS08340 PF02498 BRO family, N-terminal domain DK92_RS08425 PF01624 MutS domain I DK92_RS08425 PF05188 MutS domain II DK92_RS08425 PF05192 MutS domain III DK92_RS08425 PF05190 MutS family domain IV DK92_RS08425 PF00488 MutS domain V DK92_RS08435 PF02863 Arginine repressor, C-terminal domain DK92_RS08435 PF01316 Arginine repressor, DNA binding domain DK92_RS08440 PF05746 DALR anticodon binding domain DK92_RS08440 PF00750 tRNA synthetases class I (R) DK92_RS08440 PF03485 Arginyl tRNA synthetase N terminal domain DK92_RS08450 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DK92_RS08450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK92_RS08455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DK92_RS08455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK92_RS08460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK92_RS08460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DK92_RS08465 PF01336 OB-fold nucleic acid binding domain DK92_RS08465 PF00152 tRNA synthetases class II (D, K and N) DK92_RS08465 PF02938 GAD domain DK92_RS08470 PF13393 Histidyl-tRNA synthetase DK92_RS08470 PF03129 Anticodon binding domain DK92_RS08475 PF01783 Ribosomal L32p protein family DK92_RS08480 PF00471 Ribosomal protein L33 DK92_RS08490 PF01022 Bacterial regulatory protein, arsR family DK92_RS08530 PF03551 Transcriptional regulator PadR-like family DK92_RS08555 PF00163 Ribosomal protein S4/S9 N-terminal domain DK92_RS08555 PF01479 S4 domain DK92_RS08565 PF03796 DnaB-like helicase C terminal domain DK92_RS08565 PF00772 DnaB-like helicase N terminal domain DK92_RS08570 PF03948 Ribosomal protein L9, C-terminal domain DK92_RS08570 PF01281 Ribosomal protein L9, N-terminal domain DK92_RS08575 PF01368 DHH family DK92_RS08575 PF02272 DHHA1 domain DK92_RS08580 PF13932 GidA associated domain DK92_RS08580 PF01134 Glucose inhibited division protein A DK92_RS08595 PF03315 Serine dehydratase beta chain DK92_RS08595 PF01842 ACT domain DK92_RS08600 PF03313 Serine dehydratase alpha chain DK92_RS08605 PF06737 Transglycosylase-like domain DK92_RS08610 PF02361 Cobalt transport protein DK92_RS08615 PF00005 ABC transporter DK92_RS08620 PF00005 ABC transporter DK92_RS08625 PF01066 CDP-alcohol phosphatidyltransferase DK92_RS08635 PF05193 Peptidase M16 inactive domain DK92_RS08635 PF00675 Insulinase (Peptidase family M16) DK92_RS08645 PF00535 Glycosyl transferase family 2 DK92_RS08650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DK92_RS08650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DK92_RS08650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DK92_RS08655 PF00483 Nucleotidyl transferase DK92_RS08665 PF02463 RecF/RecN/SMC N terminal domain DK92_RS08670 PF06800 Sugar transport protein DK92_RS08675 PF00478 IMP dehydrogenase / GMP reductase domain DK92_RS08675 PF00571 CBS domain DK92_RS08680 PF00579 tRNA synthetases class I (W and Y) DK92_RS08685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DK92_RS08685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DK92_RS08690 PF00005 ABC transporter DK92_RS08690 PF12848 ABC transporter DK92_RS08720 PF02590 Predicted SPOUT methyltransferase DK92_RS08725 PF13180 PDZ domain