locus-tag	class	description
SD90_RS00005	COG1475	DNA binding
SD90_RS00015	COG0592	DNA-directed DNA polymerase activity
SD90_RS00025	COG0012	GTP binding
SD90_RS00035	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SD90_RS00040	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SD90_RS00065	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SD90_RS00070	COG0531	amino acid
SD90_RS00245	COG3942	CHAP domain
SD90_RS00265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SD90_RS00275	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SD90_RS00290	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SD90_RS00310	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SD90_RS00325	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SD90_RS00340	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SD90_RS00355	COG1454	alcohol dehydrogenase
SD90_RS00355	COG1012	belongs to the aldehyde dehydrogenase family
SD90_RS00360	COG1064	alcohol dehydrogenase
SD90_RS00365	COG0534	Mate efflux family protein
SD90_RS00475	COG0201	protein transport
SD90_RS00610	COG1121	(ABC) transporter
SD90_RS00615	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SD90_RS00630	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD90_RS00650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SD90_RS00655	COG1459	type II secretion system
SD90_RS00660	COG4537	Required for transformation and DNA binding
SD90_RS00700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SD90_RS00705	COG1363	Peptidase, m42
SD90_RS00715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD90_RS00720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SD90_RS00730	COG1428	Deoxynucleoside kinase
SD90_RS00735	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SD90_RS00765	COG4509	Sortase family
SD90_RS00790	COG2031	fatty acid transporter
SD90_RS00800	COG0183	Belongs to the thiolase family
SD90_RS00805	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SD90_RS00820	COG0251	oxidation-reduction process
SD90_RS00835	COG1269	ATP hydrolysis coupled proton transport
SD90_RS00840	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SD90_RS00850	COG1527	subunit (C
SD90_RS00855	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
SD90_RS00890	COG1744	ABC transporter substrate-binding protein PnrA-like
SD90_RS00930	COG0626	cystathionine gamma-synthase activity
SD90_RS00960	COG3623	hexulose-6-phosphate isomerase
SD90_RS00980	COG4175	Glycine betaine
SD90_RS00980	COG3448	diguanylate cyclase activity
SD90_RS00990	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD90_RS00990	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD90_RS01015	COG1268	BioY protein
SD90_RS01020	COG1234	tRNA 3'-trailer cleavage
SD90_RS01050	COG0705	Rhomboid family
SD90_RS01050	COG0457	Tetratricopeptide repeat
SD90_RS01070	COG1132	(ABC) transporter
SD90_RS01075	COG1132	(ABC) transporter
SD90_RS01085	COG0756	dUTP diphosphatase activity
SD90_RS01110	COG3290	protein histidine kinase activity
SD90_RS01135	COG1847	R3H domain protein
SD90_RS01155	COG1175	transmembrane transport
SD90_RS01160	COG0395	ABC-type sugar transport system, permease component
SD90_RS01170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SD90_RS01185	COG0084	hydrolase, TatD family'
SD90_RS01210	COG1564	THIamine pyrophosphokinase
SD90_RS01225	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SD90_RS01250	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SD90_RS01260	COG0765	amino acid transport
SD90_RS01280	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SD90_RS01290	COG0719	Fe-S assembly protein
SD90_RS01295	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SD90_RS01310	COG1686	Belongs to the peptidase S11 family
SD90_RS01315	COG1686	Belongs to the peptidase S11 family
SD90_RS01320	COG4166	transmembrane transport
SD90_RS01325	COG0601	transmembrane transport
SD90_RS01330	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SD90_RS01335	COG0444	Belongs to the ABC transporter superfamily
SD90_RS01385	COG5433	transposase activity
SD90_RS01395	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
SD90_RS01400	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SD90_RS01405	COG1534	Rna-binding protein
SD90_RS01415	COG1713	HD superfamily hydrolase involved in NAD metabolism
SD90_RS01420	COG0799	negative regulation of ribosome biogenesis
SD90_RS01425	COG2226	methyltransferase
SD90_RS01440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD90_RS01445	COG1464	Belongs to the NlpA lipoprotein family
SD90_RS01460	COG1114	Component of the transport system for branched-chain amino acids
SD90_RS01470	COG0569	domain protein
SD90_RS01475	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SD90_RS01485	COG1704	LemA family
SD90_RS01500	COG0745	RESPONSE REGULATOR receiver
SD90_RS01520	COG1484	DNA-dependent DNA replication
SD90_RS01530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SD90_RS01550	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SD90_RS01565	COG1254	Belongs to the acylphosphatase family
SD90_RS01570	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SD90_RS01625	COG1187	pseudouridine synthase activity
SD90_RS01640	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SD90_RS01645	COG0671	phosphoesterase, PA-phosphatase related
SD90_RS01650	COG1242	4 iron, 4 sulfur cluster binding
SD90_RS01655	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SD90_RS01660	COG1253	flavin adenine dinucleotide binding
SD90_RS01665	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SD90_RS01680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD90_RS01685	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD90_RS01690	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD90_RS01695	COG1120	ATPase activity
SD90_RS01705	COG2244	polysaccharide biosynthetic process
SD90_RS01730	COG0470	DNA polymerase III
SD90_RS01755	COG1393	Belongs to the ArsC family
SD90_RS01760	COG0708	Exodeoxyribonuclease III
SD90_RS01770	COG1304	FMN binding
SD90_RS01845	COG1028	Short-chain dehydrogenase reductase Sdr
SD90_RS01850	COG0673	inositol 2-dehydrogenase activity
SD90_RS01865	COG0494	nUDIX hydrolase
SD90_RS01875	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SD90_RS01965	COG1702	phosphate starvation-inducible protein PhoH
SD90_RS01970	COG1573	uracil-dna glycosylase
SD90_RS01980	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SD90_RS01995	COG2274	protein secretion by the type I secretion system
SD90_RS02000	COG2274	protein secretion by the type I secretion system
SD90_RS02035	COG2801	Transposase and inactivated derivatives
SD90_RS02040	COG2801	Transposase and inactivated derivatives
SD90_RS02045	COG2801	Transposase and inactivated derivatives
SD90_RS02055	COG3279	Response regulator of the LytR AlgR family
SD90_RS02070	COG2274	protein secretion by the type I secretion system
SD90_RS02080	COG3328	transposase activity
SD90_RS02095	COG3328	transposase activity
SD90_RS02160	COG0433	COG0433 Predicted ATPase
SD90_RS02165	COG2814	Major facilitator Superfamily
SD90_RS02175	COG0557	exoribonuclease II activity
SD90_RS02205	COG0463	Glycosyl transferase, family 2
SD90_RS02215	COG0778	Nitroreductase
SD90_RS02220	COG0006	proline dipeptidase activity
SD90_RS02225	COG1609	Transcriptional regulator
SD90_RS02235	COG0438	transferase activity, transferring glycosyl groups
SD90_RS02245	COG4555	ABC transporter
SD90_RS02265	COG0183	Belongs to the thiolase family
SD90_RS02280	COG0745	RESPONSE REGULATOR receiver
SD90_RS02285	COG5002	protein histidine kinase activity
SD90_RS02290	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SD90_RS02300	COG1196	nuclear chromosome segregation
SD90_RS02310	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SD90_RS02410	COG0561	phosphatase activity
SD90_RS02415	COG0561	phosphatase activity
SD90_RS02420	COG0552	protein localization to endoplasmic reticulum
SD90_RS02425	COG0477	Major facilitator Superfamily
SD90_RS02435	COG2190	(PTS) system
SD90_RS02435	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD90_RS02435	COG1263	PTS System
SD90_RS02445	COG3689	TIGRFAM TIGR03943 family protein
SD90_RS02450	COG0701	Predicted permease
SD90_RS02460	COG2183	response to ionizing radiation
SD90_RS02505	COG0826	peptidase U32
SD90_RS02510	COG4443	Transcriptional Coactivator p15 (PC4)
SD90_RS02555	COG0386	Belongs to the glutathione peroxidase family
SD90_RS02560	COG1164	Oligoendopeptidase f
SD90_RS02570	COG0772	Belongs to the SEDS family
SD90_RS02605	COG1078	dGTPase activity
SD90_RS02620	COG1609	Transcriptional regulator
SD90_RS02630	COG3716	PTS system mannose fructose sorbose family IID component
SD90_RS02635	COG3715	PTS system
SD90_RS02640	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD90_RS02655	COG1028	Short-chain dehydrogenase reductase Sdr
SD90_RS02675	COG0546	phosphoglycolate phosphatase activity
SD90_RS02690	COG2884	Cell division ATP-binding protein ftsE
SD90_RS02695	COG2177	Part of the ABC transporter FtsEX involved in
SD90_RS02710	COG5433	transposase activity
SD90_RS02720	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SD90_RS02720	COG1199	ATP-dependent helicase activity
SD90_RS02725	COG0436	Aminotransferase
SD90_RS02760	COG2188	Transcriptional regulator
SD90_RS02765	COG2222	sugar isomerase
SD90_RS02775	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SD90_RS02780	COG0716	FMN binding
SD90_RS02790	COG0038	chloride channel
SD90_RS02860	COG1131	(ABC) transporter
SD90_RS02880	COG4708	membrane
SD90_RS02890	COG1597	lipid kinase activity
SD90_RS02975	COG0577	efflux transmembrane transporter activity
SD90_RS02985	COG2321	neutral zinc metallopeptidase
SD90_RS03000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD90_RS03010	COG1970	mechanosensitive ion channel activity
SD90_RS03015	COG0358	DNA primase activity
SD90_RS03020	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SD90_RS03025	COG2151	metal-sulfur cluster biosynthetic enzyme
SD90_RS03070	COG1216	Glycosyl transferase, family 2
SD90_RS03125	COG1368	sulfuric ester hydrolase activity
SD90_RS03130	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SD90_RS03150	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SD90_RS03155	COG0285	dihydrofolate synthase activity
SD90_RS03165	COG1104	cysteine desulfurase activity
SD90_RS03190	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SD90_RS03195	COG0583	DNA-binding transcription factor activity
SD90_RS03205	COG0564	pseudouridine synthase activity
SD90_RS03235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SD90_RS03240	COG1136	(ABC) transporter
SD90_RS03245	COG0577	efflux transmembrane transporter activity
SD90_RS03250	COG0584	glycerophosphoryl diester phosphodiesterase
SD90_RS03260	COG1837	Belongs to the UPF0109 family
SD90_RS03310	COG1349	DNA-binding transcription factor activity
SD90_RS03315	COG1105	Belongs to the carbohydrate kinase PfkB family
SD90_RS03320	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SD90_RS03320	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SD90_RS03320	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD90_RS03325	COG1388	LysM domain
SD90_RS03325	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD90_RS03330	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD90_RS03330	COG1388	LysM domain
SD90_RS03350	COG0105	UTP biosynthetic process
SD90_RS03370	COG0488	(ABC) transporter
SD90_RS03380	COG0242	peptide deformylase activity
SD90_RS03385	COG0737	Belongs to the 5'-nucleotidase family
SD90_RS03390	COG2357	RelA SpoT domain protein
SD90_RS03395	COG0745	RESPONSE REGULATOR receiver
SD90_RS03430	COG3425	synthase
SD90_RS03440	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SD90_RS03495	COG0583	DNA-binding transcription factor activity
SD90_RS03520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD90_RS03525	COG0765	amino acid transport
SD90_RS03545	COG0187	DNA topoisomerase II activity
SD90_RS03555	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD90_RS03575	COG0539	negative regulation of cytoplasmic translation
SD90_RS03610	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SD90_RS03615	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
SD90_RS03625	COG0300	oxidoreductase activity
SD90_RS03630	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SD90_RS03630	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SD90_RS03645	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SD90_RS03650	COG2384	SAM-dependent methyltransferase
SD90_RS03660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD90_RS03665	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SD90_RS03675	COG1088	dTDP-glucose 4,6-dehydratase activity
SD90_RS03680	COG1051	belongs to the nudix hydrolase family
SD90_RS03685	COG0628	permease
SD90_RS03690	COG0457	Tetratricopeptide repeat
SD90_RS03695	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SD90_RS03715	COG1129	ABC transporter
SD90_RS03735	COG0488	(ABC) transporter
SD90_RS03740	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SD90_RS03745	COG0022	dehydrogenase e1 component
SD90_RS03745	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD90_RS03750	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD90_RS03765	COG5492	domain, Protein
SD90_RS03770	COG0095	Lipoate-protein ligase
SD90_RS03775	COG3442	glutamine amidotransferase
SD90_RS03780	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SD90_RS03785	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
SD90_RS03805	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SD90_RS03815	COG0647	UMP catabolic process
SD90_RS03830	COG1518	maintenance of DNA repeat elements
SD90_RS03835	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
SD90_RS03845	COG0105	UTP biosynthetic process
SD90_RS03880	COG3715	PTS system
SD90_RS03885	COG3716	PTS system mannose fructose sorbose family IID component
SD90_RS03890	COG2972	Histidine kinase
SD90_RS03895	COG2207	Transcriptional regulator
SD90_RS03895	COG4753	response regulator
SD90_RS03905	COG1012	belongs to the aldehyde dehydrogenase family
SD90_RS03920	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD90_RS03950	COG0285	dihydrofolate synthase activity
SD90_RS03985	COG1176	ABC-type spermidine putrescine transport system, permease component I
SD90_RS03990	COG1177	transmembrane transport
SD90_RS04000	COG4565	transcriptional regulatory protein
SD90_RS04005	COG3290	protein histidine kinase activity
SD90_RS04010	COG3493	citrate carrier protein
SD90_RS04025	COG3700	Belongs to the class B bacterial acid phosphatase family
SD90_RS04030	COG0038	chloride channel
SD90_RS04040	COG0628	permease
SD90_RS04050	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SD90_RS04065	COG1104	cysteine desulfurase activity
SD90_RS04080	COG2357	RelA SpoT domain protein
SD90_RS04090	COG0564	pseudouridine synthase activity
SD90_RS04095	COG0280	phosphate acetyltransferase
SD90_RS04100	COG4221	oxidoreductase activity
SD90_RS04115	COG1174	glycine betaine transport
SD90_RS04130	COG2233	PERMEase
SD90_RS04155	COG2890	protein-(glutamine-N5) methyltransferase activity
SD90_RS04185	COG1132	(ABC) transporter
SD90_RS04190	COG1132	(ABC) transporter
SD90_RS04210	COG3764	Sortase (surface protein transpeptidase)
SD90_RS04215	COG0346	lactoylglutathione lyase activity
SD90_RS04230	COG1272	protein, Hemolysin III
SD90_RS04250	COG0758	DNA mediated transformation
SD90_RS04255	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SD90_RS04275	COG0511	ligase activity, forming carbon-carbon bonds
SD90_RS04280	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
SD90_RS04295	COG2851	Citrate transporter
SD90_RS04305	COG0511	ligase activity, forming carbon-carbon bonds
SD90_RS04310	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
SD90_RS04340	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
SD90_RS04360	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SD90_RS04370	COG2188	Transcriptional regulator
SD90_RS04390	COG0488	(ABC) transporter
SD90_RS04400	COG0352	thiamine-phosphate diphosphorylase activity
SD90_RS04400	COG0351	phosphomethylpyrimidine kinase
SD90_RS04405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD90_RS04410	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
SD90_RS04410	COG1328	CTP reductase activity
SD90_RS04415	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SD90_RS04445	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SD90_RS04465	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SD90_RS04470	COG4684	Psort location CytoplasmicMembrane, score
SD90_RS04475	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SD90_RS04480	COG1079	Belongs to the binding-protein-dependent transport system permease family
SD90_RS04485	COG4603	Belongs to the binding-protein-dependent transport system permease family
SD90_RS04490	COG3845	ABC transporter
SD90_RS04495	COG1744	ABC transporter substrate-binding protein PnrA-like
SD90_RS04500	COG0295	cytidine deaminase activity
SD90_RS04505	COG2813	Specifically methylates the guanine in position
SD90_RS04520	COG5002	protein histidine kinase activity
SD90_RS04525	COG0745	RESPONSE REGULATOR receiver
SD90_RS04535	COG0704	Plays a role in the regulation of phosphate uptake
SD90_RS04550	COG0581	inorganic phosphate transmembrane transporter activity
SD90_RS04555	COG0573	inorganic phosphate transmembrane transporter activity
SD90_RS04565	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
SD90_RS04565	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SD90_RS04570	COG0483	inositol monophosphate 1-phosphatase activity
SD90_RS04585	COG0196	riboflavin kinase activity
SD90_RS04615	COG4591	ABC-type transport system involved in lipoprotein release permease component
SD90_RS04615	COG1136	(ABC) transporter
SD90_RS04665	COG1115	amino acid carrier protein
SD90_RS04670	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SD90_RS04680	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD90_RS04685	COG1126	abc transporter atp-binding protein
SD90_RS04690	COG0765	amino acid transport
SD90_RS04695	COG2824	Alkylphosphonate utilization operon protein PhnA
SD90_RS04710	COG0469	pyruvate kinase activity
SD90_RS04725	COG1725	Transcriptional regulator
SD90_RS04730	COG1131	(ABC) transporter
SD90_RS04765	COG1388	LysM domain
SD90_RS04765	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD90_RS04775	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD90_RS04780	COG4824	toxin secretion phage lysis holin
SD90_RS05050	COG1396	sequence-specific DNA binding
SD90_RS05090	COG0058	SHG alpha-glucan phosphorylase activity
SD90_RS05095	COG1640	4-alpha-glucanotransferase
SD90_RS05100	COG1609	Transcriptional regulator
SD90_RS05105	COG2182	Extracellular solute-binding protein
SD90_RS05110	COG1175	transmembrane transport
SD90_RS05115	COG3833	ABC-type maltose transport systems, permease component
SD90_RS05130	COG0657	acetylesterase activity
SD90_RS05135	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SD90_RS05145	COG1696	Membrane protein involved in D-alanine export
SD90_RS05165	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD90_RS05170	COG1126	abc transporter atp-binding protein
SD90_RS05175	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD90_RS05185	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD90_RS05195	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD90_RS05195	COG3711	transcriptional antiterminator
SD90_RS05205	COG2723	6-phospho-beta-galactosidase activity
SD90_RS05230	COG2801	Transposase and inactivated derivatives
SD90_RS05235	COG0157	Belongs to the NadC ModD family
SD90_RS05250	COG2801	Transposase and inactivated derivatives
SD90_RS05255	COG2801	Transposase and inactivated derivatives
SD90_RS05260	COG1187	pseudouridine synthase activity
SD90_RS05270	COG2814	Major facilitator Superfamily
SD90_RS05320	COG4109	DRTGG domain
SD90_RS05350	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
SD90_RS05350	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
SD90_RS05355	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SD90_RS05360	COG1956	GAF domain-containing protein
SD90_RS05380	COG0513	Belongs to the DEAD box helicase family
SD90_RS05385	COG0726	polysaccharide deacetylase
SD90_RS05405	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SD90_RS05410	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD90_RS05415	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD90_RS05430	COG2801	Transposase and inactivated derivatives
SD90_RS05435	COG2801	Transposase and inactivated derivatives
SD90_RS05440	COG2801	Transposase and inactivated derivatives
SD90_RS05455	COG1476	TRANSCRIPTIONal
SD90_RS05470	COG4122	O-methyltransferase activity
SD90_RS05475	COG2223	nitrite transmembrane transporter activity
SD90_RS05490	COG1187	pseudouridine synthase activity
SD90_RS05535	COG0658	competence protein
SD90_RS05535	COG2333	competence protein COMEC
SD90_RS05540	COG1555	photosystem II stabilization
SD90_RS05540	COG1596	polysaccharide export
SD90_RS05545	COG0204	Acyl-transferase
SD90_RS05550	COG2890	protein-(glutamine-N5) methyltransferase activity
SD90_RS05565	COG0513	Belongs to the DEAD box helicase family
SD90_RS05580	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SD90_RS05595	COG2116	formate transmembrane transporter activity
SD90_RS05605	COG1827	regulation of RNA biosynthetic process
SD90_RS05620	COG2217	Heavy metal translocating P-type atpase
SD90_RS05635	COG2755	lipolytic protein G-D-S-L family
SD90_RS05650	COG0497	DNA recombination
SD90_RS05655	COG1438	arginine binding
SD90_RS05660	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
SD90_RS05685	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SD90_RS05690	COG0415	Belongs to the DNA photolyase family
SD90_RS05700	COG0765	amino acid transport
SD90_RS05705	COG4703	Protein of unknown function (DUF1797)
SD90_RS05710	COG0542	response to heat
SD90_RS05715	COG0494	nUDIX hydrolase
SD90_RS05730	COG3599	regulation of cell shape
SD90_RS05735	COG2302	S4 RNA-binding domain
SD90_RS05750	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SD90_RS05785	COG1217	gtp-binding protein TYPA
SD90_RS05790	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD90_RS05795	COG1940	carbohydrate kinase activity
SD90_RS05805	COG0783	Belongs to the Dps family
SD90_RS05820	COG4470	Protein conserved in bacteria
SD90_RS05825	COG1609	Transcriptional regulator
SD90_RS05830	COG3480	Lon protease (S16) C-terminal proteolytic domain
SD90_RS05840	COG0742	ribosomal rna small subunit methyltransferase
SD90_RS05850	COG0549	Belongs to the carbamate kinase family
SD90_RS05855	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD90_RS05860	COG1288	antiporter activity
SD90_RS05870	COG0454	-acetyltransferase
SD90_RS05875	COG2235	arginine
SD90_RS05900	COG2972	Histidine kinase
SD90_RS05915	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD90_RS05920	COG0785	Cytochrome C biogenesis protein
SD90_RS05930	COG0673	inositol 2-dehydrogenase activity
SD90_RS05970	COG1605	Chorismate mutase
SD90_RS05970	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SD90_RS05990	COG2226	methyltransferase
SD90_RS06000	COG3250	beta-galactosidase activity
SD90_RS06005	COG2207	Transcriptional regulator
SD90_RS06005	COG4753	response regulator
SD90_RS06010	COG2972	Histidine kinase
SD90_RS06020	COG1653	transport
SD90_RS06025	COG0395	ABC-type sugar transport system, permease component
SD90_RS06030	COG1175	transmembrane transport
SD90_RS06035	COG1940	carbohydrate kinase activity
SD90_RS06040	COG2723	6-phospho-beta-galactosidase activity
SD90_RS06045	COG3525	Glycosyl hydrolase, family 20, catalytic domain
SD90_RS06060	COG0383	alpha-mannosidase activity
SD90_RS06150	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SD90_RS06155	COG1739	Uncharacterized protein family UPF0029
SD90_RS06165	COG1098	S1 RNA binding domain
SD90_RS06175	COG2197	response regulator
SD90_RS06180	COG4585	Histidine kinase
SD90_RS06190	COG2815	serine threonine protein kinase
SD90_RS06190	COG0515	serine threonine protein kinase
SD90_RS06200	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SD90_RS06200	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SD90_RS06210	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SD90_RS06230	COG0583	DNA-binding transcription factor activity
SD90_RS06235	COG0183	Belongs to the thiolase family
SD90_RS06240	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SD90_RS06245	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
SD90_RS06250	COG1028	Short-chain dehydrogenase reductase Sdr
SD90_RS06255	COG2610	gluconate transmembrane transporter activity
SD90_RS06270	COG0116	Belongs to the methyltransferase superfamily
SD90_RS06295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD90_RS06300	COG3579	cysteine-type endopeptidase activity
SD90_RS06310	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SD90_RS06315	COG1113	amino acid transport
SD90_RS06320	COG0492	ferredoxin-NADP+ reductase activity
SD90_RS06330	COG1126	abc transporter atp-binding protein
SD90_RS06340	COG0513	Belongs to the DEAD box helicase family
SD90_RS06350	COG0768	penicillin binding
SD90_RS06385	COG1131	(ABC) transporter
SD90_RS06410	COG0446	pyridine nucleotide-disulphide oxidoreductase
SD90_RS06415	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SD90_RS06450	COG1755	Isoprenylcysteine carboxyl methyltransferase
SD90_RS06455	COG0656	L-ascorbic acid biosynthetic process
SD90_RS06465	COG1283	sodium-dependent phosphate transmembrane transporter activity
SD90_RS06485	COG0561	phosphatase activity
SD90_RS06490	COG2860	membrane
SD90_RS06500	COG1105	Belongs to the carbohydrate kinase PfkB family
SD90_RS06540	COG2217	Heavy metal translocating P-type atpase
SD90_RS06570	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SD90_RS06575	COG0195	Participates in both transcription termination and antitermination
SD90_RS06595	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD90_RS06710	COG1783	phage Terminase large subunit
SD90_RS06825	COG4974	Belongs to the 'phage' integrase family
SD90_RS06845	COG4473	ABC transporter
SD90_RS06850	COG1131	(ABC) transporter
SD90_RS06855	COG0537	adenosine 5'-monophosphoramidase activity
SD90_RS06865	COG1316	TRANSCRIPTIONal
SD90_RS06875	COG0802	atpase or kinase
SD90_RS06880	COG2252	PERMEase
SD90_RS06885	COG0561	phosphatase activity
SD90_RS06895	COG3715	PTS system
SD90_RS06900	COG3716	PTS system mannose fructose sorbose family IID component
SD90_RS06910	COG5433	transposase activity
SD90_RS06935	COG0439	Biotin carboxylase
SD90_RS06950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SD90_RS06955	COG1028	Short-chain dehydrogenase reductase Sdr
SD90_RS06960	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SD90_RS06985	COG1024	Enoyl-CoA hydratase
SD90_RS07020	COG0588	phosphoglycerate mutase activity
SD90_RS07025	COG2261	transglycosylase associated protein
SD90_RS07050	COG0574	Belongs to the PEP-utilizing enzyme family
SD90_RS07050	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SD90_RS07055	COG1335	isochorismatase
SD90_RS07065	COG0436	Aminotransferase
SD90_RS07075	COG0561	phosphatase activity
SD90_RS07080	COG0252	asparaginase activity
SD90_RS07095	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SD90_RS07100	COG1129	ABC transporter
SD90_RS07115	COG1132	(ABC) transporter
SD90_RS07120	COG4988	ABC transporter
SD90_RS07125	COG1120	ATPase activity
SD90_RS07150	COG1388	LysM domain
SD90_RS07150	COG3942	CHAP domain
SD90_RS07170	COG1482	cell wall glycoprotein biosynthetic process
SD90_RS07175	COG1940	carbohydrate kinase activity
SD90_RS07185	COG2190	(PTS) system
SD90_RS07185	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD90_RS07185	COG1263	PTS System
SD90_RS07190	COG1621	beta-fructofuranosidase activity
SD90_RS07195	COG1609	Transcriptional regulator
SD90_RS07215	COG2131	deaminase
SD90_RS07220	COG0006	proline dipeptidase activity
SD90_RS07260	COG1194	a g-specific adenine glycosylase
SD90_RS07270	COG3118	belongs to the thioredoxin family
SD90_RS07300	COG0681	Belongs to the peptidase S26 family
SD90_RS07305	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SD90_RS07320	COG1882	Formate acetyltransferase
SD90_RS07325	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SD90_RS07340	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SD90_RS07345	COG2814	Major facilitator Superfamily
SD90_RS07350	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SD90_RS07375	COG0789	Transcriptional regulator
SD90_RS07390	COG2081	HI0933 family
SD90_RS07400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD90_RS07405	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SD90_RS07425	COG0456	acetyltransferase
SD90_RS07430	COG1214	PFAM Peptidase M22, glycoprotease
SD90_RS07445	COG0174	glutamine synthetase
SD90_RS07450	COG0789	Transcriptional regulator
SD90_RS07465	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SD90_RS07520	COG0668	transmembrane transport
SD90_RS07530	COG4720	Psort location CytoplasmicMembrane, score
SD90_RS07535	COG0351	phosphomethylpyrimidine kinase
SD90_RS07580	COG1929	Belongs to the glycerate kinase type-1 family
SD90_RS07585	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
SD90_RS07615	COG0577	efflux transmembrane transporter activity
SD90_RS07620	COG1136	(ABC) transporter
SD90_RS07650	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD90_RS07650	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD90_RS07655	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD90_RS07705	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SD90_RS07710	COG1476	TRANSCRIPTIONal
SD90_RS07730	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SD90_RS07740	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SD90_RS07755	COG1045	serine acetyltransferase
SD90_RS07770	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SD90_RS07785	COG3711	transcriptional antiterminator
SD90_RS07815	COG1846	Transcriptional regulator
SD90_RS07835	COG4589	Belongs to the CDS family
SD90_RS07845	COG1862	Preprotein translocase
SD90_RS07855	COG1523	belongs to the glycosyl hydrolase 13 family
SD90_RS07865	COG3842	ATPase activity
SD90_RS07905	COG2190	(PTS) system
SD90_RS07905	COG1263	PTS System
SD90_RS07905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD90_RS07910	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SD90_RS07930	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SD90_RS07935	COG0512	Glutamine amidotransferase of anthranilate synthase
SD90_RS07940	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SD90_RS07960	COG0601	transmembrane transport
SD90_RS07970	COG1122	ATPase activity
SD90_RS07990	COG0803	Belongs to the bacterial solute-binding protein 9 family
SD90_RS08020	COG3711	transcriptional antiterminator
SD90_RS08030	COG3942	CHAP domain
SD90_RS08030	COG1705	Flagellar rod assembly protein muramidase FlgJ
SD90_RS08035	COG2205	protein histidine kinase activity
SD90_RS08040	COG0745	RESPONSE REGULATOR receiver
SD90_RS08045	COG0577	efflux transmembrane transporter activity
SD90_RS08050	COG1136	(ABC) transporter
SD90_RS08100	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
SD90_RS08115	COG1882	Formate acetyltransferase
SD90_RS08120	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD90_RS08125	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD90_RS08130	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD90_RS08135	COG2390	Transcriptional regulator
SD90_RS08140	COG1349	DNA-binding transcription factor activity
SD90_RS08145	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SD90_RS08160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD90_RS08175	COG0564	pseudouridine synthase activity
SD90_RS08205	COG0542	response to heat
SD90_RS08210	COG4463	regulation of RNA biosynthetic process
SD90_RS08225	COG0450	alkyl hydroperoxide reductase
SD90_RS08240	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
SD90_RS08250	COG3404	Formiminotransferase-cyclodeaminase
SD90_RS08265	COG0531	amino acid
SD90_RS08295	COG3590	peptidase
SD90_RS08300	COG0366	Alpha amylase catalytic
SD90_RS08305	COG1263	PTS System
SD90_RS08305	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD90_RS08310	COG2188	Transcriptional regulator
SD90_RS08320	COG2514	catechol 2,3-dioxygenase activity
SD90_RS08330	COG0602	queuosine metabolic process
SD90_RS08345	COG1328	CTP reductase activity
SD90_RS08370	COG1393	Belongs to the ArsC family
SD90_RS08385	COG0519	Catalyzes the synthesis of GMP from XMP
SD90_RS08405	COG0582	viral genome integration into host DNA
SD90_RS08425	COG3617	BRO family, N-terminal domain
SD90_RS08520	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD90_RS08525	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD90_RS08530	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD90_RS08610	COG1511	domain protein
SD90_RS08630	COG0305	Participates in initiation and elongation during chromosome replication
SD90_RS08660	COG1760	l-serine dehydratase
SD90_RS08665	COG1760	l-serine dehydratase
SD90_RS08670	COG0741	lytic transglycosylase activity
SD90_RS08675	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SD90_RS08690	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SD90_RS08700	COG0612	Peptidase, M16
SD90_RS08740	COG0516	GMP reductase activity
SD90_RS08740	COG0517	IMP dehydrogenase activity
SD90_RS08750	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD90_RS08755	COG0488	(ABC) transporter
SD90_RS08790	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain