SPY49_RS00005 PF00308 Bacterial dnaA protein SPY49_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SPY49_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SPY49_RS00010 PF02767 DNA polymerase III beta subunit, central domain SPY49_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SPY49_RS00015 PF06107 SPY49_RS00015 SPY49_RS00020 PF01926 50S ribosome-binding GTPase SPY49_RS00020 PF06071 Protein of unknown function (DUF933) SPY49_RS00025 PF01195 Peptidyl-tRNA hydrolase SPY49_RS00030 PF00270 DEAD/DEAH box helicase SPY49_RS00030 PF00271 Helicase conserved C-terminal domain SPY49_RS00030 PF02559 CarD-like/TRCF domain SPY49_RS00030 PF03461 TRCF domain SPY49_RS00035 PF01479 S4 domain SPY49_RS00040 PF04977 Septum formation initiator SPY49_RS00045 PF13354 Beta-lactamase enzyme family SPY49_RS00050 PF01171 PP-loop family SPY49_RS00055 PF00156 Phosphoribosyl transferase domain SPY49_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) SPY49_RS00060 PF01434 Peptidase family M41 SPY49_RS00060 PF06480 FtsH Extracellular SPY49_RS00065 PF13520 Amino acid permease SPY49_RS00240 PF05257 CHAP domain SPY49_RS00245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPY49_RS00245 PF14572 Phosphoribosyl synthetase-associated domain SPY49_RS00250 PF02565 Recombination protein O C terminal SPY49_RS00250 PF11967 Recombination protein O N terminal SPY49_RS00255 PF02504 Fatty acid synthesis protein SPY49_RS00260 PF00550 Phosphopantetheine attachment site SPY49_RS00265 PF01259 SAICAR synthetase SPY49_RS00270 PF02769 AIR synthase related protein, C-terminal domain SPY49_RS00270 PF13507 CobB/CobQ-like glutamine amidotransferase domain SPY49_RS00275 PF00156 Phosphoribosyl transferase domain SPY49_RS00275 PF13537 Glutamine amidotransferase domain SPY49_RS00280 PF00586 AIR synthase related protein, N-terminal domain SPY49_RS00280 PF02769 AIR synthase related protein, C-terminal domain SPY49_RS00285 PF00551 Formyl transferase SPY49_RS00290 PF01808 AICARFT/IMPCHase bienzyme SPY49_RS00290 PF02142 MGS-like domain SPY49_RS00295 PF05257 CHAP domain SPY49_RS00295 PF08460 Bacterial SH3 domain SPY49_RS00300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SPY49_RS00300 PF02843 Phosphoribosylglycinamide synthetase, C domain SPY49_RS00300 PF02844 Phosphoribosylglycinamide synthetase, N domain SPY49_RS00305 PF00731 AIR carboxylase SPY49_RS00310 PF02222 ATP-grasp domain SPY49_RS00315 PF01850 PIN domain SPY49_RS00320 PF00206 Lyase SPY49_RS00320 PF10397 Adenylosuccinate lyase C-terminus SPY49_RS00325 PF01381 Helix-turn-helix SPY49_RS00330 PF05491 Holliday junction DNA helicase ruvB C-terminus SPY49_RS00330 PF05496 Holliday junction DNA helicase ruvB N-terminus SPY49_RS00335 PF01451 Low molecular weight phosphotyrosine protein phosphatase SPY49_RS00340 PF02493 MORN repeat SPY49_RS00345 PF01757 SPY49_RS00345 SPY49_RS00350 PF00171 Aldehyde dehydrogenase family SPY49_RS00350 PF00465 Iron-containing alcohol dehydrogenase SPY49_RS00355 PF00107 Zinc-binding dehydrogenase SPY49_RS00355 PF08240 Alcohol dehydrogenase GroES-like domain SPY49_RS00360 PF01554 MatE SPY49_RS00365 PF00338 Ribosomal protein S10p/S20e SPY49_RS00370 PF00297 Ribosomal protein L3 SPY49_RS00375 PF00573 Ribosomal protein L4/L1 family SPY49_RS00385 PF00181 Ribosomal Proteins L2, RNA binding domain SPY49_RS00385 PF03947 Ribosomal Proteins L2, C-terminal domain SPY49_RS00390 PF00203 Ribosomal protein S19 SPY49_RS00395 PF00237 Ribosomal protein L22p/L17e SPY49_RS00400 PF00189 Ribosomal protein S3, C-terminal domain SPY49_RS00400 PF07650 KH domain SPY49_RS00405 PF00252 Ribosomal protein L16p/L10e SPY49_RS00410 PF00831 Ribosomal L29 protein SPY49_RS00415 PF00366 Ribosomal protein S17 SPY49_RS00420 PF00238 Ribosomal protein L14p/L23e SPY49_RS00425 PF00467 KOW motif SPY49_RS00425 PF17136 SPY49_RS00425 SPY49_RS00430 PF00281 Ribosomal protein L5 SPY49_RS00430 PF00673 ribosomal L5P family C-terminus SPY49_RS00435 PF00253 Ribosomal protein S14p/S29e SPY49_RS00440 PF00410 Ribosomal protein S8 SPY49_RS00445 PF00347 Ribosomal protein L6 SPY49_RS00450 PF00861 Ribosomal L18p/L5e family SPY49_RS00455 PF00333 Ribosomal protein S5, N-terminal domain SPY49_RS00455 PF03719 Ribosomal protein S5, C-terminal domain SPY49_RS00460 PF00327 Ribosomal protein L30p/L7e SPY49_RS00465 PF00828 Ribosomal protein L18e/L15 SPY49_RS00470 PF00344 SecY translocase SPY49_RS00475 PF00406 Adenylate kinase SPY49_RS00480 PF01176 Translation initiation factor 1A / IF-1 SPY49_RS00485 PF00416 Ribosomal protein S13/S18 SPY49_RS00490 PF00411 Ribosomal protein S11 SPY49_RS00495 PF01000 RNA polymerase Rpb3/RpoA insert domain SPY49_RS00495 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SPY49_RS00495 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SPY49_RS00500 PF01196 Ribosomal protein L17 SPY49_RS00595 PF08544 GHMP kinases C terminal SPY49_RS00600 PF01047 MarR family SPY49_RS00605 PF00005 ABC transporter SPY49_RS00610 PF00950 SPY49_RS00610 SPY49_RS00615 PF01230 HIT domain SPY49_RS00620 PF00579 tRNA synthetases class I (W and Y) SPY49_RS00620 PF01479 S4 domain SPY49_RS00625 PF00905 Penicillin binding protein transpeptidase domain SPY49_RS00625 PF00912 Transglycosylase SPY49_RS00630 PF00562 RNA polymerase Rpb2, domain 6 SPY49_RS00630 PF04560 RNA polymerase Rpb2, domain 7 SPY49_RS00630 PF04561 RNA polymerase Rpb2, domain 2 SPY49_RS00630 PF04563 RNA polymerase beta subunit SPY49_RS00630 PF04565 RNA polymerase Rpb2, domain 3 SPY49_RS00630 PF10385 RNA polymerase beta subunit external 1 domain SPY49_RS00635 PF00623 RNA polymerase Rpb1, domain 2 SPY49_RS00635 PF04983 RNA polymerase Rpb1, domain 3 SPY49_RS00635 PF04997 RNA polymerase Rpb1, domain 1 SPY49_RS00635 PF04998 RNA polymerase Rpb1, domain 5 SPY49_RS00635 PF05000 RNA polymerase Rpb1, domain 4 SPY49_RS00640 PF06279 SPY49_RS00640 SPY49_RS00645 PF00437 Type II/IV secretion system protein SPY49_RS00650 PF00482 Type II secretion system (T2SS), protein F SPY49_RS00655 PF07963 Prokaryotic N-terminal methylation motif SPY49_RS00665 PF11773 SPY49_RS00665 SPY49_RS00670 PF15980 SPY49_RS00670 SPY49_RS00680 PF02384 N-6 DNA Methylase SPY49_RS00685 PF00871 Acetokinase family SPY49_RS00695 PF03807 NADP oxidoreductase coenzyme F420-dependent SPY49_RS00695 PF14748 Pyrroline-5-carboxylate reductase dimerisation SPY49_RS00700 PF05343 M42 glutamyl aminopeptidase SPY49_RS00710 PF01609 Transposase DDE domain SPY49_RS00710 PF13808 SPY49_RS00710 SPY49_RS00715 PF15513 Domain of unknown function (DUF4651) SPY49_RS00720 PF00085 Thioredoxin SPY49_RS00725 PF01588 Putative tRNA binding domain SPY49_RS00725 PF14794 Domain of unknown function (DUF4479) SPY49_RS00730 PF00436 Single-strand binding protein family SPY49_RS00735 PF01712 Deoxynucleoside kinase SPY49_RS00740 PF01207 Dihydrouridine synthase (Dus) SPY49_RS00745 PF01430 Hsp33 protein SPY49_RS00750 PF05043 Mga helix-turn-helix domain SPY49_RS00750 PF08270 SPY49_RS00750 SPY49_RS00750 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SPY49_RS00755 PF08341 Fibronectin-binding protein signal sequence SPY49_RS00760 PF10502 Signal peptidase, peptidase S26 SPY49_RS00765 PF12892 T surface-antigen of pili SPY49_RS00770 PF04203 Sortase family SPY49_RS00780 PF12833 Helix-turn-helix domain SPY49_RS00785 PF02986 Fibronectin binding repeat SPY49_RS00785 PF05738 Cna protein B-type domain SPY49_RS00785 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SPY49_RS00795 PF02667 SPY49_RS00795 SPY49_RS00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPY49_RS00800 PF03466 LysR substrate binding domain SPY49_RS00805 PF00108 Thiolase, N-terminal domain SPY49_RS00805 PF02803 Thiolase, C-terminal domain SPY49_RS00810 PF01144 Coenzyme A transferase SPY49_RS00815 PF01144 Coenzyme A transferase SPY49_RS00820 PF08348 SPY49_RS00820 SPY49_RS00820 PF13309 SPY49_RS00820 SPY49_RS00825 PF01042 Endoribonuclease L-PSP SPY49_RS00830 PF13303 SPY49_RS00830 SPY49_RS00840 PF01496 V-type ATPase 116kDa subunit family SPY49_RS00845 PF00137 ATP synthase subunit C SPY49_RS00855 PF01992 ATP synthase (C/AC39) subunit SPY49_RS00860 PF01990 ATP synthase (F/14-kDa) subunit SPY49_RS00865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPY49_RS00865 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPY49_RS00865 PF16886 SPY49_RS00865 SPY49_RS00870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPY49_RS00870 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPY49_RS00875 PF01813 ATP synthase subunit D SPY49_RS00880 PF05816 SPY49_RS00880 SPY49_RS00890 PF00709 Adenylosuccinate synthetase SPY49_RS00895 PF02608 Basic membrane protein SPY49_RS00900 PF00467 KOW motif SPY49_RS00900 PF02357 Transcription termination factor nusG SPY49_RS00905 PF07461 Nicotine adenine dinucleotide glycohydrolase (NADase) SPY49_RS00910 PF16718 SPY49_RS00910 SPY49_RS00915 PF01289 Thiol-activated cytolysin SPY49_RS00935 PF01053 Cys/Met metabolism PLP-dependent enzyme SPY49_RS00940 PF00133 tRNA synthetases class I (I, L, M and V) SPY49_RS00940 PF08264 Anticodon-binding domain of tRNA SPY49_RS00940 PF09334 tRNA synthetases class I (M) SPY49_RS00940 PF13603 Leucyl-tRNA synthetase, Domain 2 SPY49_RS00945 PF03611 SPY49_RS00945 SPY49_RS00950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS00955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPY49_RS00960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPY49_RS00965 PF01261 Xylose isomerase-like TIM barrel SPY49_RS00970 PF00596 Class II Aldolase and Adducin N-terminal domain SPY49_RS00975 PF00874 PRD domain SPY49_RS00975 PF08279 HTH domain SPY49_RS00980 PF13483 Beta-lactamase superfamily domain SPY49_RS00985 PF00005 ABC transporter SPY49_RS00985 PF00571 CBS domain SPY49_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS00990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SPY49_RS00995 PF00476 DNA polymerase family A SPY49_RS00995 PF01367 5'-3' exonuclease, C-terminal SAM fold SPY49_RS00995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SPY49_RS01000 PF13380 CoA binding domain SPY49_RS01005 PF01475 Ferric uptake regulator family SPY49_RS01015 PF11922 SPY49_RS01015 SPY49_RS01030 PF13333 SPY49_RS01030 SPY49_RS01035 PF00665 Integrase core domain SPY49_RS01040 PF13276 SPY49_RS01040 SPY49_RS01045 PF01527 Transposase SPY49_RS01050 PF07158 SPY49_RS01050 SPY49_RS01055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SPY49_RS01055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SPY49_RS01065 PF13518 Helix-turn-helix domain SPY49_RS01070 PF06161 SPY49_RS01070 SPY49_RS01075 PF01702 Queuine tRNA-ribosyltransferase SPY49_RS01080 PF02632 BioY family SPY49_RS01085 PF12706 Beta-lactamase superfamily domain SPY49_RS01090 PF14437 SPY49_RS01090 SPY49_RS01095 PF01841 Transglutaminase-like superfamily SPY49_RS01100 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPY49_RS01100 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPY49_RS01105 PF00342 Phosphoglucose isomerase SPY49_RS01115 PF01694 Rhomboid family SPY49_RS01120 PF00483 Nucleotidyl transferase SPY49_RS01125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SPY49_RS01125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SPY49_RS01135 PF00005 ABC transporter SPY49_RS01135 PF00664 ABC transporter transmembrane region SPY49_RS01140 PF00005 ABC transporter SPY49_RS01140 PF00664 ABC transporter transmembrane region SPY49_RS01145 PF02677 SPY49_RS01145 SPY49_RS01155 PF13481 AAA domain SPY49_RS01155 PF13541 Subunit ChlI of Mg-chelatase SPY49_RS01160 PF00484 Carbonic anhydrase SPY49_RS01165 PF01987 Mitochondrial biogenesis AIM24 SPY49_RS01170 PF00749 tRNA synthetases class I (E and Q), catalytic domain SPY49_RS01175 PF14501 GHKL domain SPY49_RS01180 PF14501 GHKL domain SPY49_RS01185 PF00072 Response regulator receiver domain SPY49_RS01185 PF04397 LytTr DNA-binding domain SPY49_RS01190 PF00825 Ribonuclease P SPY49_RS01195 PF02096 60Kd inner membrane protein SPY49_RS01200 PF01424 R3H domain SPY49_RS01200 PF13083 KH domain SPY49_RS01200 PF14804 Jag N-terminus SPY49_RS01205 PF00468 Ribosomal protein L34 SPY49_RS01210 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SPY49_RS01215 PF01547 Bacterial extracellular solute-binding protein SPY49_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS01230 PF04854 SPY49_RS01230 SPY49_RS01235 PF00701 Dihydrodipicolinate synthetase family SPY49_RS01240 PF00480 ROK family SPY49_RS01245 PF01380 SIS domain SPY49_RS01245 PF01418 Helix-turn-helix domain, rpiR family SPY49_RS01250 PF01026 TatD related DNase SPY49_RS01255 PF13331 SPY49_RS01255 SPY49_RS01255 PF13662 Toprim domain SPY49_RS01260 PF00398 Ribosomal RNA adenine dimethylase SPY49_RS01265 PF03193 Protein of unknown function, DUF258 SPY49_RS01265 PF16745 SPY49_RS01265 SPY49_RS01270 PF00834 Ribulose-phosphate 3 epimerase family SPY49_RS01275 PF04263 Thiamin pyrophosphokinase, catalytic domain SPY49_RS01275 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SPY49_RS01280 PF02646 SPY49_RS01280 SPY49_RS01285 PF01966 HD domain SPY49_RS01290 PF00156 Phosphoribosyl transferase domain SPY49_RS01290 PF09182 Bacterial purine repressor, N-terminal SPY49_RS01300 PF00164 Ribosomal protein S12/S23 SPY49_RS01305 PF00177 Ribosomal protein S7p/S5e SPY49_RS01310 PF00009 Elongation factor Tu GTP binding domain SPY49_RS01310 PF00679 Elongation factor G C-terminus SPY49_RS01310 PF03144 Elongation factor Tu domain 2 SPY49_RS01310 PF03764 Elongation factor G, domain IV SPY49_RS01310 PF14492 Elongation Factor G, domain II SPY49_RS01315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPY49_RS01315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SPY49_RS01320 PF00005 ABC transporter SPY49_RS01335 PF02673 SPY49_RS01335 SPY49_RS01340 PF05389 Negative regulator of genetic competence (MecA) SPY49_RS01345 PF00953 Glycosyl transferase family 4 SPY49_RS01350 PF00005 ABC transporter SPY49_RS01355 PF01458 Uncharacterized protein family (UPF0051) SPY49_RS01360 PF00266 Aminotransferase class-V SPY49_RS01365 PF01592 NifU-like N terminal domain SPY49_RS01370 PF01458 Uncharacterized protein family (UPF0051) SPY49_RS01375 PF00768 D-alanyl-D-alanine carboxypeptidase SPY49_RS01375 PF01351 Ribonuclease HII SPY49_RS01385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPY49_RS01390 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS01395 PF12911 SPY49_RS01395 SPY49_RS01400 PF00005 ABC transporter SPY49_RS01400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPY49_RS01405 PF00005 ABC transporter SPY49_RS01405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SPY49_RS01450 PF13419 Haloacid dehalogenase-like hydrolase SPY49_RS01455 PF01926 50S ribosome-binding GTPase SPY49_RS01460 PF01985 CRS1 / YhbY (CRM) domain SPY49_RS01465 PF01467 Cytidylyltransferase SPY49_RS01470 PF01966 HD domain SPY49_RS01475 PF02410 Oligomerisation domain SPY49_RS01480 PF13649 Methyltransferase domain SPY49_RS01485 PF05636 HIGH Nucleotidyl Transferase SPY49_RS01490 PF01709 Transcriptional regulator SPY49_RS01500 PF03180 NLPA lipoprotein SPY49_RS01505 PF00005 ABC transporter SPY49_RS01505 PF09383 NIL domain SPY49_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS01515 PF05525 SPY49_RS01515 SPY49_RS01520 PF00375 Sodium:dicarboxylate symporter family SPY49_RS01525 PF02254 TrkA-N domain SPY49_RS01530 PF02386 Cation transport protein SPY49_RS01535 PF02527 rRNA small subunit methyltransferase G SPY49_RS01540 PF04011 LemA family SPY49_RS01545 PF01435 Peptidase family M48 SPY49_RS01550 PF02620 SPY49_RS01550 SPY49_RS01555 PF00072 Response regulator receiver domain SPY49_RS01555 PF00486 Transcriptional regulatory protein, C terminal SPY49_RS01560 PF00512 His Kinase A (phospho-acceptor) domain SPY49_RS01560 PF00672 HAMP domain SPY49_RS01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS01565 PF03477 ATP cone domain SPY49_RS01570 PF07261 Replication initiation and membrane attachment SPY49_RS01575 PF01695 IstB-like ATP binding protein SPY49_RS01575 PF07319 Primosomal protein DnaI N-terminus SPY49_RS01580 PF01926 50S ribosome-binding GTPase SPY49_RS01580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SPY49_RS01585 PF00176 SNF2 family N-terminal domain SPY49_RS01585 PF00271 Helicase conserved C-terminal domain SPY49_RS01585 PF04434 SPY49_RS01585 SPY49_RS01585 PF08455 SPY49_RS01585 SPY49_RS01595 PF01225 Mur ligase family, catalytic domain SPY49_RS01595 PF02875 Mur ligase family, glutamate ligase domain SPY49_RS01595 PF08245 Mur ligase middle domain SPY49_RS01600 PF13673 Acetyltransferase (GNAT) domain SPY49_RS01605 PF02618 YceG-like family SPY49_RS01610 PF01272 Transcription elongation factor, GreA/GreB, C-term SPY49_RS01610 PF03449 Transcription elongation factor, N-terminal SPY49_RS01615 PF02096 60Kd inner membrane protein SPY49_RS01620 PF00708 Acylphosphatase SPY49_RS01625 PF00588 SpoU rRNA Methylase family SPY49_RS01625 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPY49_RS01635 PF01027 Inhibitor of apoptosis-promoting Bax1 SPY49_RS01640 PF03672 SPY49_RS01640 SPY49_RS01645 PF01177 Asp/Glu/Hydantoin racemase SPY49_RS01650 PF01725 Ham1 family SPY49_RS01655 PF12850 Calcineurin-like phosphoesterase superfamily domain SPY49_RS01660 PF00571 CBS domain SPY49_RS01665 PF00589 Phage integrase family SPY49_RS01670 PF02616 ScpA/B protein SPY49_RS01675 PF04079 Putative transcriptional regulators (Ypuh-like) SPY49_RS01680 PF00849 RNA pseudouridylate synthase SPY49_RS01680 PF01479 S4 domain SPY49_RS01685 PF01809 SPY49_RS01685 SPY49_RS01690 PF00588 SpoU rRNA Methylase family SPY49_RS01705 PF04055 Radical SAM superfamily SPY49_RS01705 PF16199 SPY49_RS01705 SPY49_RS01710 PF06962 Putative rRNA methylase SPY49_RS01715 PF00571 CBS domain SPY49_RS01715 PF01595 SPY49_RS01715 SPY49_RS01715 PF03471 Transporter associated domain SPY49_RS01720 PF04055 Radical SAM superfamily SPY49_RS01720 PF13353 4Fe-4S single cluster domain SPY49_RS01725 PF01368 DHH family SPY49_RS01725 PF02833 DHHA2 domain SPY49_RS01730 PF08820 SPY49_RS01730 SPY49_RS01735 PF01032 FecCD transport family SPY49_RS01740 PF01032 FecCD transport family SPY49_RS01745 PF01497 Periplasmic binding protein SPY49_RS01750 PF00005 ABC transporter SPY49_RS01755 PF02875 Mur ligase family, glutamate ligase domain SPY49_RS01755 PF08245 Mur ligase middle domain SPY49_RS01760 PF01943 SPY49_RS01760 SPY49_RS01760 PF14667 Polysaccharide biosynthesis C-terminal domain SPY49_RS01765 PF14681 Uracil phosphoribosyltransferase SPY49_RS01770 PF00574 Clp protease SPY49_RS01775 PF09902 SPY49_RS01775 SPY49_RS01780 PF02223 Thymidylate kinase SPY49_RS01785 PF13177 DNA polymerase III, delta subunit SPY49_RS01795 PF06156 SPY49_RS01795 SPY49_RS01800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SPY49_RS01810 PF03932 CutC family SPY49_RS01815 PF03960 ArsC family SPY49_RS01820 PF03372 Endonuclease/Exonuclease/phosphatase family SPY49_RS01830 PF01070 FMN-dependent dehydrogenase SPY49_RS01835 PF00082 Subtilase family SPY49_RS01835 PF02225 PA domain SPY49_RS01835 PF04650 SPY49_RS01835 SPY49_RS01835 PF06280 Fn3-like domain (DUF1034) SPY49_RS01840 PF06912 SPY49_RS01840 SPY49_RS01845 PF01588 Putative tRNA binding domain SPY49_RS01845 PF09334 tRNA synthetases class I (M) SPY49_RS01850 PF00268 Ribonucleotide reductase, small chain SPY49_RS01855 PF07972 NrdI Flavodoxin like SPY49_RS01860 PF00317 Ribonucleotide reductase, all-alpha domain SPY49_RS01860 PF02867 Ribonucleotide reductase, barrel domain SPY49_RS01860 PF08343 Ribonucleotide reductase N-terminal SPY49_RS01865 PF03496 ADP-ribosyltransferase exoenzyme SPY49_RS01920 PF07374 SPY49_RS01920 SPY49_RS01930 PF07374 SPY49_RS01930 SPY49_RS01960 PF03288 Poxvirus D5 protein-like SPY49_RS01960 PF08706 SPY49_RS01960 SPY49_RS01965 PF08708 Primase C terminal 1 (PriCT-1) SPY49_RS01995 PF01381 Helix-turn-helix SPY49_RS02000 PF01381 Helix-turn-helix SPY49_RS02005 PF00589 Phage integrase family SPY49_RS02005 PF14659 Phage integrase, N-terminal SAM-like domain SPY49_RS02010 PF11195 SPY49_RS02010 SPY49_RS02015 PF00106 short chain dehydrogenase SPY49_RS02020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPY49_RS02020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SPY49_RS02025 PF07690 Major Facilitator Superfamily SPY49_RS02030 PF00132 Bacterial transferase hexapeptide (six repeats) SPY49_RS02030 PF00483 Nucleotidyl transferase SPY49_RS02035 PF00293 NUDIX domain SPY49_RS02045 PF01048 Phosphorylase superfamily SPY49_RS02055 PF01325 Iron dependent repressor, N-terminal DNA binding domain SPY49_RS02055 PF02742 Iron dependent repressor, metal binding and dimerisation domain SPY49_RS02055 PF04023 FeoA domain SPY49_RS02065 PF00005 ABC transporter SPY49_RS02070 PF00950 SPY49_RS02070 SPY49_RS02075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPY49_RS02080 PF01580 FtsK/SpoIIIE family SPY49_RS02080 PF09397 Ftsk gamma domain SPY49_RS02085 PF11877 SPY49_RS02085 SPY49_RS02090 PF00298 Ribosomal protein L11, RNA binding domain SPY49_RS02090 PF03946 Ribosomal protein L11, N-terminal domain SPY49_RS02095 PF00687 Ribosomal protein L1p/L10e family SPY49_RS02100 PF00696 Amino acid kinase family SPY49_RS02105 PF01765 Ribosome recycling factor SPY49_RS02110 PF13509 S1 domain SPY49_RS02115 PF01625 Peptide methionine sulfoxide reductase SPY49_RS02120 PF06855 Protein of unknown function (DUF1250) SPY49_RS02125 PF01476 LysM domain SPY49_RS02130 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family SPY49_RS02135 PF02562 PhoH-like protein SPY49_RS02140 PF03167 Uracil DNA glycosylase superfamily SPY49_RS02145 PF02130 Uncharacterized protein family UPF0054 SPY49_RS02150 PF01219 Prokaryotic diacylglycerol kinase SPY49_RS02155 PF01926 50S ribosome-binding GTPase SPY49_RS02155 PF07650 KH domain SPY49_RS02160 PF00293 NUDIX domain SPY49_RS02170 PF10439 SPY49_RS02170 SPY49_RS02175 PF00872 SPY49_RS02175 SPY49_RS02180 PF00872 SPY49_RS02180 SPY49_RS02185 PF10439 SPY49_RS02185 SPY49_RS02230 PF01381 Helix-turn-helix SPY49_RS02235 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SPY49_RS02235 PF06827 Zinc finger found in FPG and IleRS SPY49_RS02235 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SPY49_RS02240 PF01121 Dephospho-CoA kinase SPY49_RS02245 PF05872 SPY49_RS02245 SPY49_RS02250 PF07690 Major Facilitator Superfamily SPY49_RS02255 PF03840 Preprotein translocase SecG subunit SPY49_RS02260 PF00575 S1 RNA binding domain SPY49_RS02260 PF00773 RNB domain SPY49_RS02260 PF08206 Ribonuclease B OB domain SPY49_RS02265 PF01668 SmpB protein SPY49_RS02270 PF05096 Glutamine cyclotransferase SPY49_RS02275 PF01470 Pyroglutamyl peptidase SPY49_RS02280 PF06166 SPY49_RS02280 SPY49_RS02285 PF06149 SPY49_RS02285 SPY49_RS02290 PF00535 Glycosyl transferase family 2 SPY49_RS02295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPY49_RS02300 PF00881 Nitroreductase family SPY49_RS02305 PF00557 Metallopeptidase family M24 SPY49_RS02305 PF01321 Creatinase/Prolidase N-terminal domain SPY49_RS02310 PF00356 Bacterial regulatory proteins, lacI family SPY49_RS02310 PF13377 Periplasmic binding protein-like domain SPY49_RS02315 PF00534 Glycosyl transferases group 1 SPY49_RS02315 PF13439 Glycosyltransferase Family 4 SPY49_RS02320 PF00534 Glycosyl transferases group 1 SPY49_RS02320 PF13439 Glycosyltransferase Family 4 SPY49_RS02325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPY49_RS02325 PF02824 TGS domain SPY49_RS02325 PF03129 Anticodon binding domain SPY49_RS02325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPY49_RS02330 PF00005 ABC transporter SPY49_RS02335 PF06182 SPY49_RS02335 SPY49_RS02340 PF06182 SPY49_RS02340 SPY49_RS02350 PF00108 Thiolase, N-terminal domain SPY49_RS02350 PF02803 Thiolase, C-terminal domain SPY49_RS02355 PF00501 AMP-binding enzyme SPY49_RS02360 PF11311 SPY49_RS02360 SPY49_RS02365 PF00072 Response regulator receiver domain SPY49_RS02365 PF00486 Transcriptional regulatory protein, C terminal SPY49_RS02370 PF00512 His Kinase A (phospho-acceptor) domain SPY49_RS02370 PF00989 PAS fold SPY49_RS02370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS02375 PF00753 Metallo-beta-lactamase superfamily SPY49_RS02380 PF00035 Double-stranded RNA binding motif SPY49_RS02380 PF14622 Ribonuclease-III-like SPY49_RS02385 PF02463 RecF/RecN/SMC N terminal domain SPY49_RS02385 PF06470 SMC proteins Flexible Hinge Domain SPY49_RS02395 PF08501 Shikimate dehydrogenase substrate binding domain SPY49_RS02400 PF01261 Xylose isomerase-like TIM barrel SPY49_RS02405 PF01996 F420-0:Gamma-glutamyl ligase SPY49_RS02415 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) SPY49_RS02425 PF00535 Glycosyl transferase family 2 SPY49_RS02435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPY49_RS02435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SPY49_RS02435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPY49_RS02445 PF13443 Cro/C1-type HTH DNA-binding domain SPY49_RS02450 PF10088 SPY49_RS02450 SPY49_RS02465 PF04221 RelB antitoxin SPY49_RS02470 PF05016 Plasmid stabilisation system protein SPY49_RS02475 PF04860 Phage portal protein SPY49_RS02490 PF00152 tRNA synthetases class II (D, K and N) SPY49_RS02495 PF13535 ATP-grasp domain SPY49_RS02500 PF02016 LD-carboxypeptidase SPY49_RS02510 PF00665 Integrase core domain SPY49_RS02510 PF13276 SPY49_RS02510 SPY49_RS02515 PF01527 Transposase SPY49_RS02520 PF08282 haloacid dehalogenase-like hydrolase SPY49_RS02525 PF08282 haloacid dehalogenase-like hydrolase SPY49_RS02530 PF00448 SRP54-type protein, GTPase domain SPY49_RS02530 PF02881 SRP54-type protein, helical bundle domain SPY49_RS02535 PF07690 Major Facilitator Superfamily SPY49_RS02540 PF00874 PRD domain SPY49_RS02540 PF03123 CAT RNA binding domain SPY49_RS02545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPY49_RS02545 PF00367 phosphotransferase system, EIIB SPY49_RS02545 PF02378 Phosphotransferase system, EIIC SPY49_RS02550 PF00232 Glycosyl hydrolase family 1 SPY49_RS02555 PF09323 SPY49_RS02555 SPY49_RS02560 PF03773 SPY49_RS02560 SPY49_RS02570 PF00575 S1 RNA binding domain SPY49_RS02570 PF09371 Tex-like protein N-terminal domain SPY49_RS02570 PF12836 Helix-hairpin-helix motif SPY49_RS02570 PF16921 SPY49_RS02570 SPY49_RS02575 PF10263 SPY49_RS02575 SPY49_RS02580 PF04024 SPY49_RS02580 SPY49_RS02585 PF02603 HPr Serine kinase N terminus SPY49_RS02585 PF07475 HPr Serine kinase C-terminal domain SPY49_RS02590 PF01790 SPY49_RS02590 SPY49_RS02595 PF06103 SPY49_RS02595 SPY49_RS02600 PF12732 SPY49_RS02600 SPY49_RS02610 PF01136 SPY49_RS02610 SPY49_RS02615 PF01136 SPY49_RS02615 SPY49_RS02615 PF16325 SPY49_RS02615 SPY49_RS02630 PF00152 tRNA synthetases class II (D, K and N) SPY49_RS02630 PF01336 OB-fold nucleic acid binding domain SPY49_RS02635 PF13419 Haloacid dehalogenase-like hydrolase SPY49_RS02640 PF00300 Histidine phosphatase superfamily (branch 1) SPY49_RS02645 PF04073 Aminoacyl-tRNA editing domain SPY49_RS02650 PF09515 Thiamine transporter protein (Thia_YuaJ) SPY49_RS02655 PF01183 Glycosyl hydrolases family 25 SPY49_RS02660 PF07155 ECF-type riboflavin transporter, S component SPY49_RS02665 PF14478 Domain of unknown function (DUF4430) SPY49_RS02670 PF00255 Glutathione peroxidase SPY49_RS02675 PF01432 Peptidase family M3 SPY49_RS02675 PF08439 Oligopeptidase F SPY49_RS02680 PF00311 Phosphoenolpyruvate carboxylase SPY49_RS02690 PF00009 Elongation factor Tu GTP binding domain SPY49_RS02690 PF03143 Elongation factor Tu C-terminal domain SPY49_RS02690 PF03144 Elongation factor Tu domain 2 SPY49_RS02695 PF00121 Triosephosphate isomerase SPY49_RS02700 PF02388 FemAB family SPY49_RS02705 PF02388 FemAB family SPY49_RS02710 PF08282 haloacid dehalogenase-like hydrolase SPY49_RS02720 PF01966 HD domain SPY49_RS02725 PF09148 Domain of unknown function (DUF1934) SPY49_RS02730 PF00122 E1-E2 ATPase SPY49_RS02730 PF00689 Cation transporting ATPase, C-terminus SPY49_RS02730 PF00690 Cation transporter/ATPase, N-terminus SPY49_RS02730 PF00702 haloacid dehalogenase-like hydrolase SPY49_RS02735 PF00356 Bacterial regulatory proteins, lacI family SPY49_RS02735 PF13407 Periplasmic binding protein domain SPY49_RS02740 PF07940 Heparinase II/III-like protein SPY49_RS02740 PF16889 SPY49_RS02740 SPY49_RS02745 PF03613 SPY49_RS02745 SPY49_RS02750 PF03609 SPY49_RS02750 SPY49_RS02755 PF03830 PTS system sorbose subfamily IIB component SPY49_RS02760 PF07470 Glycosyl Hydrolase Family 88 SPY49_RS02765 PF03610 PTS system fructose IIA component SPY49_RS02770 PF13561 Enoyl-(Acyl carrier protein) reductase SPY49_RS02775 PF02502 Ribose/Galactose Isomerase SPY49_RS02775 PF12408 Ribose-5-phosphate isomerase SPY49_RS02780 PF00294 pfkB family carbohydrate kinase SPY49_RS02785 PF01081 KDPG and KHG aldolase SPY49_RS02790 PF13419 Haloacid dehalogenase-like hydrolase SPY49_RS02795 PF08331 SPY49_RS02795 SPY49_RS02795 PF13484 SPY49_RS02795 SPY49_RS02800 PF00472 RF-1 domain SPY49_RS02800 PF03462 PCRF domain SPY49_RS02805 PF00005 ABC transporter SPY49_RS02810 PF02687 SPY49_RS02810 SPY49_RS02820 PF13561 Enoyl-(Acyl carrier protein) reductase SPY49_RS02825 PF00270 DEAD/DEAH box helicase SPY49_RS02825 PF00929 Exonuclease SPY49_RS02825 PF13307 Helicase C-terminal domain SPY49_RS02830 PF00155 Aminotransferase class I and II SPY49_RS02835 PF00152 tRNA synthetases class II (D, K and N) SPY49_RS02835 PF01336 OB-fold nucleic acid binding domain SPY49_RS02840 PF03668 SPY49_RS02840 SPY49_RS02845 PF01933 Uncharacterised protein family UPF0052 SPY49_RS02850 PF02650 WhiA C-terminal HTH domain SPY49_RS02850 PF10298 WhiA N-terminal LAGLIDADG-like domain SPY49_RS02850 PF14527 WhiA LAGLIDADG-like domain SPY49_RS02855 PF03577 SPY49_RS02855 SPY49_RS02860 PF01297 Periplasmic solute binding protein family SPY49_RS02860 PF09223 YodA lipocalin-like domain SPY49_RS02865 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS02865 PF07702 UTRA domain SPY49_RS02870 PF01380 SIS domain SPY49_RS02875 PF01197 Ribosomal protein L31 SPY49_RS02880 PF01368 DHH family SPY49_RS02880 PF02272 DHHA1 domain SPY49_RS02885 PF00258 Flavodoxin SPY49_RS02890 PF01817 Chorismate mutase type II SPY49_RS02895 PF00654 Voltage gated chloride channel SPY49_RS02900 PF01245 Ribosomal protein L19 SPY49_RS02910 PF13419 Haloacid dehalogenase-like hydrolase SPY49_RS02915 PF00204 DNA gyrase B SPY49_RS02915 PF00986 DNA gyrase B subunit, carboxyl terminus SPY49_RS02915 PF01751 Toprim domain SPY49_RS02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS02920 PF06160 SPY49_RS02920 SPY49_RS02925 PF07997 Protein of unknown function (DUF1694) SPY49_RS02930 PF00113 Enolase, C-terminal TIM barrel domain SPY49_RS02930 PF03952 Enolase, N-terminal domain SPY49_RS02940 PF05043 Mga helix-turn-helix domain SPY49_RS02940 PF08270 SPY49_RS02940 SPY49_RS02945 PF00746 SPY49_RS02945 SPY49_RS02945 PF07564 SPY49_RS02945 SPY49_RS02955 PF00881 Nitroreductase family SPY49_RS02965 PF02624 YcaO-like family SPY49_RS02970 PF02517 CAAX protease self-immunity SPY49_RS02980 PF00005 ABC transporter SPY49_RS02985 PF12698 ABC-2 family transporter protein SPY49_RS02990 PF12698 ABC-2 family transporter protein SPY49_RS02995 PF03372 Endonuclease/Exonuclease/phosphatase family SPY49_RS03000 PF06177 SPY49_RS03000 SPY49_RS03005 PF00533 BRCA1 C Terminus (BRCT) domain SPY49_RS03005 PF01653 NAD-dependent DNA ligase adenylation domain SPY49_RS03005 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SPY49_RS03005 PF03120 NAD-dependent DNA ligase OB-fold domain SPY49_RS03005 PF12826 Helix-hairpin-helix motif SPY49_RS03005 PF14520 Helix-hairpin-helix domain SPY49_RS03010 PF00781 Diacylglycerol kinase catalytic domain SPY49_RS03015 PF00137 ATP synthase subunit C SPY49_RS03020 PF00119 ATP synthase A chain SPY49_RS03025 PF00430 ATP synthase B/B' CF(0) SPY49_RS03030 PF00213 ATP synthase delta (OSCP) subunit SPY49_RS03035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPY49_RS03035 PF00306 ATP synthase alpha/beta chain, C terminal domain SPY49_RS03035 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPY49_RS03040 PF00231 ATP synthase SPY49_RS03045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SPY49_RS03045 PF02874 ATP synthase alpha/beta family, beta-barrel domain SPY49_RS03050 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SPY49_RS03050 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SPY49_RS03055 PF06612 SPY49_RS03055 SPY49_RS03060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPY49_RS03065 PF11772 SPY49_RS03065 SPY49_RS03075 PF01409 tRNA synthetases class II core domain (F) SPY49_RS03075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SPY49_RS03080 PF01588 Putative tRNA binding domain SPY49_RS03080 PF03147 Ferredoxin-fold anticodon binding domain SPY49_RS03080 PF03483 B3/4 domain SPY49_RS03080 PF03484 tRNA synthetase B5 domain SPY49_RS03085 PF02566 OsmC-like protein SPY49_RS03090 PF08349 SPY49_RS03090 SPY49_RS03095 PF02687 SPY49_RS03095 SPY49_RS03100 PF00005 ABC transporter SPY49_RS03105 PF04228 SPY49_RS03105 SPY49_RS03110 PF12705 PD-(D/E)XK nuclease superfamily SPY49_RS03115 PF00580 UvrD/REP helicase N-terminal domain SPY49_RS03115 PF12705 PD-(D/E)XK nuclease superfamily SPY49_RS03115 PF13361 UvrD-like helicase C-terminal domain SPY49_RS03125 PF01165 Ribosomal protein S21 SPY49_RS03130 PF01741 Large-conductance mechanosensitive channel, MscL SPY49_RS03135 PF01807 CHC2 zinc finger SPY49_RS03135 PF08275 DNA primase catalytic core, N-terminal domain SPY49_RS03135 PF10410 DnaB-helicase binding domain of primase SPY49_RS03135 PF13155 Toprim-like SPY49_RS03140 PF00140 Sigma-70 factor, region 1 SPY49_RS03140 PF03979 Sigma-70 factor, region 1 SPY49_RS03140 PF04539 Sigma-70 region 3 SPY49_RS03140 PF04542 Sigma-70 region 2 SPY49_RS03140 PF04545 Sigma-70, region 4 SPY49_RS03145 PF01883 Domain of unknown function DUF59 SPY49_RS03150 PF04321 RmlD substrate binding domain SPY49_RS03155 PF09314 SPY49_RS03155 SPY49_RS03160 PF00535 Glycosyl transferase family 2 SPY49_RS03165 PF01061 SPY49_RS03165 SPY49_RS03170 PF00005 ABC transporter SPY49_RS03175 PF00535 Glycosyl transferase family 2 SPY49_RS03180 PF05045 SPY49_RS03180 SPY49_RS03185 PF00884 Sulfatase SPY49_RS03190 PF00535 Glycosyl transferase family 2 SPY49_RS03195 PF10066 SPY49_RS03195 SPY49_RS03205 PF09913 SPY49_RS03205 SPY49_RS03210 PF01546 Peptidase family M20/M25/M40 SPY49_RS03210 PF07687 Peptidase dimerisation domain SPY49_RS03225 PF02224 Cytidylate kinase SPY49_RS03230 PF00707 Translation initiation factor IF-3, C-terminal domain SPY49_RS03230 PF05198 Translation initiation factor IF-3, N-terminal domain SPY49_RS03235 PF01632 Ribosomal protein L35 SPY49_RS03240 PF00453 Ribosomal protein L20 SPY49_RS03245 PF00884 Sulfatase SPY49_RS03250 PF10672 S-adenosylmethionine-dependent methyltransferase SPY49_RS03255 PF01487 Type I 3-dehydroquinase SPY49_RS03260 PF01264 Chorismate synthase SPY49_RS03265 PF06133 Protein of unknown function (DUF964) SPY49_RS03270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPY49_RS03270 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS03275 PF08245 Mur ligase middle domain SPY49_RS03285 PF00266 Aminotransferase class-V SPY49_RS03290 PF02568 Thiamine biosynthesis protein (ThiI) SPY49_RS03290 PF02926 THUMP domain SPY49_RS03300 PF00829 Ribosomal prokaryotic L21 protein SPY49_RS03305 PF04327 Protein of unknown function (DUF464) SPY49_RS03310 PF01016 Ribosomal L27 protein SPY49_RS03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPY49_RS03315 PF03466 LysR substrate binding domain SPY49_RS03320 PF01252 SPY49_RS03320 SPY49_RS03325 PF00849 RNA pseudouridylate synthase SPY49_RS03325 PF01479 S4 domain SPY49_RS03330 PF00156 Phosphoribosyl transferase domain SPY49_RS03335 PF00860 Permease family SPY49_RS03340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPY49_RS03340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPY49_RS03345 PF00117 Glutamine amidotransferase class-I SPY49_RS03345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SPY49_RS03350 PF02142 MGS-like domain SPY49_RS03350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPY49_RS03350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPY49_RS03355 PF16576 SPY49_RS03355 SPY49_RS03360 PF00005 ABC transporter SPY49_RS03365 PF02687 SPY49_RS03365 SPY49_RS03365 PF12704 MacB-like periplasmic core domain SPY49_RS03370 PF03009 Glycerophosphoryl diester phosphodiesterase family SPY49_RS03370 PF10110 SPY49_RS03370 SPY49_RS03375 PF00886 Ribosomal protein S16 SPY49_RS03380 PF13083 KH domain SPY49_RS03385 PF13306 Leucine rich repeats (6 copies) SPY49_RS03390 PF01243 Pyridoxamine 5'-phosphate oxidase SPY49_RS03395 PF01545 Cation efflux family SPY49_RS03400 PF00440 Bacterial regulatory proteins, tetR family SPY49_RS03400 PF14278 SPY49_RS03400 SPY49_RS03405 PF01782 RimM N-terminal domain SPY49_RS03405 PF05239 PRC-barrel domain SPY49_RS03410 PF01746 tRNA (Guanine-1)-methyltransferase SPY49_RS03415 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS03420 PF13303 SPY49_RS03420 SPY49_RS03425 PF02558 Ketopantoate reductase PanE/ApbA SPY49_RS03425 PF08546 Ketopantoate reductase PanE/ApbA C terminal SPY49_RS03430 PF00455 SPY49_RS03430 SPY49_RS03430 PF08220 DeoR-like helix-turn-helix domain SPY49_RS03435 PF00294 pfkB family carbohydrate kinase SPY49_RS03440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPY49_RS03440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS03440 PF02378 Phosphotransferase system, EIIC SPY49_RS03445 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPY49_RS03450 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPY49_RS03455 PF13333 SPY49_RS03455 SPY49_RS03460 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPY49_RS03465 PF09028 Mac 1 SPY49_RS03470 PF00334 Nucleoside diphosphate kinase SPY49_RS03475 PF06619 Protein of unknown function (DUF1149) SPY49_RS03480 PF02645 Uncharacterised protein, DegV family COG1307 SPY49_RS03490 PF00005 ABC transporter SPY49_RS03490 PF12848 ABC transporter SPY49_RS03490 PF16326 SPY49_RS03490 SPY49_RS03495 PF01327 Polypeptide deformylase SPY49_RS03500 PF00149 Calcineurin-like phosphoesterase SPY49_RS03500 PF02872 5'-nucleotidase, C-terminal domain SPY49_RS03505 PF04607 Region found in RelA / SpoT proteins SPY49_RS03510 PF00072 Response regulator receiver domain SPY49_RS03510 PF00486 Transcriptional regulatory protein, C terminal SPY49_RS03515 PF00512 His Kinase A (phospho-acceptor) domain SPY49_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS03520 PF00288 GHMP kinases N terminal domain SPY49_RS03520 PF08544 GHMP kinases C terminal SPY49_RS03525 PF00288 GHMP kinases N terminal domain SPY49_RS03525 PF08544 GHMP kinases C terminal SPY49_RS03530 PF00288 GHMP kinases N terminal domain SPY49_RS03530 PF08544 GHMP kinases C terminal SPY49_RS03535 PF01070 FMN-dependent dehydrogenase SPY49_RS03540 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SPY49_RS03545 PF00195 Chalcone and stilbene synthases, N-terminal domain SPY49_RS03545 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SPY49_RS03550 PF00303 Thymidylate synthase SPY49_RS03555 PF00186 Dihydrofolate reductase SPY49_RS03560 PF06689 ClpX C4-type zinc finger SPY49_RS03560 PF07724 AAA domain (Cdc48 subfamily) SPY49_RS03560 PF10431 C-terminal, D2-small domain, of ClpB protein SPY49_RS03565 PF01926 50S ribosome-binding GTPase SPY49_RS03575 PF00004 ATPase family associated with various cellular activities (AAA) SPY49_RS03575 PF07724 AAA domain (Cdc48 subfamily) SPY49_RS03575 PF10431 C-terminal, D2-small domain, of ClpB protein SPY49_RS03580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SPY49_RS03585 PF01676 Metalloenzyme superfamily SPY49_RS03590 PF03960 ArsC family SPY49_RS03595 PF01048 Phosphorylase superfamily SPY49_RS03600 PF01048 Phosphorylase superfamily SPY49_RS03605 PF09659 SPY49_RS03605 SPY49_RS03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPY49_RS03610 PF03466 LysR substrate binding domain SPY49_RS03620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SPY49_RS03625 PF00156 Phosphoribosyl transferase domain SPY49_RS03630 PF01425 Amidase SPY49_RS03635 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPY49_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS03645 PF03167 Uracil DNA glycosylase superfamily SPY49_RS03650 PF01979 Amidohydrolase family SPY49_RS03655 PF02660 SPY49_RS03655 SPY49_RS03660 PF00204 DNA gyrase B SPY49_RS03660 PF00986 DNA gyrase B subunit, carboxyl terminus SPY49_RS03660 PF01751 Toprim domain SPY49_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS03665 PF00521 DNA gyrase/topoisomerase IV, subunit A SPY49_RS03665 PF03989 DNA gyrase C-terminal domain, beta-propeller SPY49_RS03670 PF01063 Aminotransferase class IV SPY49_RS03675 PF11184 SPY49_RS03675 SPY49_RS03690 PF00575 S1 RNA binding domain SPY49_RS03705 PF00581 Rhodanese-like domain SPY49_RS03705 PF12368 SPY49_RS03705 SPY49_RS03715 PF03595 Voltage-dependent anion channel SPY49_RS03720 PF01715 IPP transferase SPY49_RS03725 PF01926 50S ribosome-binding GTPase SPY49_RS03725 PF13167 SPY49_RS03725 SPY49_RS03725 PF16360 SPY49_RS03725 SPY49_RS03735 PF00753 Metallo-beta-lactamase superfamily SPY49_RS03735 PF12706 Beta-lactamase superfamily domain SPY49_RS03745 PF01368 DHH family SPY49_RS03745 PF02272 DHHA1 domain SPY49_RS03745 PF10141 SPY49_RS03745 SPY49_RS03750 PF00156 Phosphoribosyl transferase domain SPY49_RS03755 PF07261 Replication initiation and membrane attachment SPY49_RS03760 PF00633 Helix-hairpin-helix motif SPY49_RS03760 PF00730 HhH-GPD superfamily base excision DNA repair protein SPY49_RS03760 PF10576 Iron-sulfur binding domain of endonuclease III SPY49_RS03765 PF04816 Family of unknown function (DUF633) SPY49_RS03770 PF01784 NIF3 (NGG1p interacting factor 3) SPY49_RS03775 PF01266 FAD dependent oxidoreductase SPY49_RS03780 PF00483 Nucleotidyl transferase SPY49_RS03785 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SPY49_RS03790 PF16363 SPY49_RS03790 SPY49_RS03795 PF00589 Phage integrase family SPY49_RS03800 PF13783 SPY49_RS03800 SPY49_RS03805 PF06114 Domain of unknown function (DUF955) SPY49_RS03810 PF01381 Helix-turn-helix SPY49_RS03850 PF10926 SPY49_RS03850 SPY49_RS03855 PF10991 Protein of unknown function (DUF2815) SPY49_RS03860 PF00476 DNA polymerase family A SPY49_RS03865 PF03288 Poxvirus D5 protein-like SPY49_RS03865 PF08706 SPY49_RS03865 SPY49_RS03870 PF08774 VRR-NUC domain SPY49_RS03875 PF00176 SNF2 family N-terminal domain SPY49_RS03875 PF00271 Helicase conserved C-terminal domain SPY49_RS03890 PF03592 Terminase small subunit SPY49_RS03895 PF04466 Phage terminase large subunit SPY49_RS03900 PF05133 Phage portal protein, SPP1 Gp6-like SPY49_RS03905 PF04233 SPY49_RS03905 SPY49_RS03920 PF14265 SPY49_RS03920 SPY49_RS03930 PF05135 Phage gp6-like head-tail connector protein SPY49_RS03940 PF04883 SPY49_RS03940 SPY49_RS03950 PF06199 SPY49_RS03950 SPY49_RS03955 PF12363 SPY49_RS03955 SPY49_RS03970 PF05709 Phage tail protein SPY49_RS03975 PF06605 Prophage endopeptidase tail SPY49_RS03980 PF07902 SPY49_RS03980 SPY49_RS03985 PF07104 SPY49_RS03985 SPY49_RS03990 PF05105 SPY49_RS03990 SPY49_RS04000 PF05257 CHAP domain SPY49_RS04000 PF08460 Bacterial SH3 domain SPY49_RS04010 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SPY49_RS04010 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SPY49_RS04015 PF00293 NUDIX domain SPY49_RS04020 PF01594 SPY49_RS04020 SPY49_RS04025 PF13181 Tetratricopeptide repeat SPY49_RS04030 PF05670 SPY49_RS04030 SPY49_RS04030 PF05833 Fibronectin-binding protein A N-terminus (FbpA) SPY49_RS04035 PF04392 ABC transporter substrate binding protein SPY49_RS04040 PF02653 SPY49_RS04040 SPY49_RS04045 PF00005 ABC transporter SPY49_RS04050 PF00753 Metallo-beta-lactamase superfamily SPY49_RS04050 PF07521 RNA-metabolising metallo-beta-lactamase SPY49_RS04055 PF00756 Putative esterase SPY49_RS04065 PF00005 ABC transporter SPY49_RS04065 PF12848 ABC transporter SPY49_RS04070 PF00676 Dehydrogenase E1 component SPY49_RS04075 PF02779 Transketolase, pyrimidine binding domain SPY49_RS04075 PF02780 Transketolase, C-terminal domain SPY49_RS04080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SPY49_RS04080 PF00364 Biotin-requiring enzyme SPY49_RS04080 PF02817 e3 binding domain SPY49_RS04090 PF00364 Biotin-requiring enzyme SPY49_RS04090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPY49_RS04090 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS04095 PF02278 Polysaccharide lyase family 8, super-sandwich domain SPY49_RS04095 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SPY49_RS04100 PF03099 Biotin/lipoate A/B protein ligase family SPY49_RS04100 PF10437 Bacterial lipoate protein ligase C-terminus SPY49_RS04105 PF07685 CobB/CobQ-like glutamine amidotransferase domain SPY49_RS04110 PF08245 Mur ligase middle domain SPY49_RS04110 PF08353 SPY49_RS04110 SPY49_RS04115 PF02457 DisA bacterial checkpoint controller nucleotide-binding SPY49_RS04120 PF07949 YbbR-like protein SPY49_RS04125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPY49_RS04125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPY49_RS04125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPY49_RS04125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPY49_RS04135 PF04055 Radical SAM superfamily SPY49_RS04135 PF06969 HemN C-terminal domain SPY49_RS04140 PF01643 Acyl-ACP thioesterase SPY49_RS04145 PF13242 HAD-hyrolase-like SPY49_RS04145 PF13344 Haloacid dehalogenase-like hydrolase SPY49_RS04150 PF07314 SPY49_RS04150 SPY49_RS04155 PF13395 HNH endonuclease SPY49_RS04155 PF16592 SPY49_RS04155 SPY49_RS04155 PF16593 SPY49_RS04155 SPY49_RS04155 PF16595 SPY49_RS04155 SPY49_RS04160 PF01867 CRISPR associated protein Cas1 SPY49_RS04165 PF09827 CRISPR associated protein Cas2 SPY49_RS04170 PF09711 CRISPR-associated protein (Cas_Csn2) SPY49_RS04180 PF00334 Nucleoside diphosphate kinase SPY49_RS04185 PF00009 Elongation factor Tu GTP binding domain SPY49_RS04185 PF00679 Elongation factor G C-terminus SPY49_RS04185 PF03144 Elongation factor Tu domain 2 SPY49_RS04185 PF06421 GTP-binding protein LepA C-terminus SPY49_RS04185 PF14492 Elongation Factor G, domain II SPY49_RS04190 PF00746 SPY49_RS04190 SPY49_RS04190 PF01391 Collagen triple helix repeat (20 copies) SPY49_RS04195 PF01641 SelR domain SPY49_RS04200 PF03601 SPY49_RS04200 SPY49_RS04205 PF03610 PTS system fructose IIA component SPY49_RS04210 PF03830 PTS system sorbose subfamily IIB component SPY49_RS04215 PF03609 SPY49_RS04215 SPY49_RS04220 PF03613 SPY49_RS04220 SPY49_RS04225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS04225 PF06580 SPY49_RS04225 SPY49_RS04230 PF00072 Response regulator receiver domain SPY49_RS04230 PF12833 Helix-turn-helix domain SPY49_RS04235 PF13343 Bacterial extracellular solute-binding protein SPY49_RS04240 PF00171 Aldehyde dehydrogenase family SPY49_RS04245 PF01541 GIY-YIG catalytic domain SPY49_RS04245 PF02151 UvrB/uvrC motif SPY49_RS04245 PF08459 UvrC Helix-hairpin-helix N-terminal SPY49_RS04250 PF00881 Nitroreductase family SPY49_RS04255 PF01546 Peptidase family M20/M25/M40 SPY49_RS04260 PF01926 50S ribosome-binding GTPase SPY49_RS04260 PF10396 GTP-binding protein TrmE N-terminus SPY49_RS04260 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SPY49_RS04270 PF00466 Ribosomal protein L10 SPY49_RS04280 PF00768 D-alanyl-D-alanine carboxypeptidase SPY49_RS04280 PF07943 Penicillin-binding protein 5, C-terminal domain SPY49_RS04285 PF01522 Polysaccharide deacetylase SPY49_RS04290 PF08245 Mur ligase middle domain SPY49_RS04295 PF01227 GTP cyclohydrolase I SPY49_RS04300 PF00809 Pterin binding enzyme SPY49_RS04305 PF02152 Dihydroneopterin aldolase SPY49_RS04310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SPY49_RS04315 PF01565 FAD binding domain SPY49_RS04315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SPY49_RS04320 PF00005 ABC transporter SPY49_RS04320 PF08402 TOBE domain SPY49_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS04335 PF13416 Bacterial extracellular solute-binding protein SPY49_RS04340 PF00072 Response regulator receiver domain SPY49_RS04345 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SPY49_RS04345 PF17203 SPY49_RS04345 SPY49_RS04350 PF03390 SPY49_RS04350 SPY49_RS04355 PF00390 Malic enzyme, N-terminal domain SPY49_RS04355 PF03949 Malic enzyme, NAD binding domain SPY49_RS04360 PF00107 Zinc-binding dehydrogenase SPY49_RS04360 PF08240 Alcohol dehydrogenase GroES-like domain SPY49_RS04365 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SPY49_RS04370 PF00654 Voltage gated chloride channel SPY49_RS04375 PF13472 GDSL-like Lipase/Acylhydrolase family SPY49_RS04380 PF01594 SPY49_RS04380 SPY49_RS04385 PF04002 RadC-like JAB domain SPY49_RS04390 PF07722 Peptidase C26 SPY49_RS04395 PF02629 CoA binding domain SPY49_RS04395 PF06971 Putative DNA-binding protein N-terminus SPY49_RS04400 PF08866 Putative amino acid metabolism SPY49_RS04405 PF00266 Aminotransferase class-V SPY49_RS04410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SPY49_RS04410 PF14572 Phosphoribosyl synthetase-associated domain SPY49_RS04415 PF01928 CYTH domain SPY49_RS04420 PF04607 Region found in RelA / SpoT proteins SPY49_RS04425 PF01513 ATP-NAD kinase SPY49_RS04430 PF00849 RNA pseudouridylate synthase SPY49_RS04435 PF01515 Phosphate acetyl/butaryl transferase SPY49_RS04440 PF00106 short chain dehydrogenase SPY49_RS04450 PF00005 ABC transporter SPY49_RS04455 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS04455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SPY49_RS04460 PF00478 IMP dehydrogenase / GMP reductase domain SPY49_RS04465 PF00156 Phosphoribosyl transferase domain SPY49_RS04470 PF00860 Permease family SPY49_RS04475 PF02424 ApbE family SPY49_RS04480 PF01361 Tautomerase enzyme SPY49_RS04485 PF00265 Thymidine kinase SPY49_RS04490 PF00472 RF-1 domain SPY49_RS04490 PF03462 PCRF domain SPY49_RS04495 PF05175 Methyltransferase small domain SPY49_RS04500 PF01300 Telomere recombination SPY49_RS04505 PF00583 Acetyltransferase (GNAT) family SPY49_RS04510 PF00464 Serine hydroxymethyltransferase SPY49_RS04515 PF04245 SPY49_RS04515 SPY49_RS04520 PF13702 Lysozyme-like SPY49_RS04525 PF00005 ABC transporter SPY49_RS04525 PF00664 ABC transporter transmembrane region SPY49_RS04530 PF00005 ABC transporter SPY49_RS04530 PF00664 ABC transporter transmembrane region SPY49_RS04535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SPY49_RS04535 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS04540 PF00056 lactate/malate dehydrogenase, NAD binding domain SPY49_RS04540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SPY49_RS04545 PF00521 DNA gyrase/topoisomerase IV, subunit A SPY49_RS04545 PF03989 DNA gyrase C-terminal domain, beta-propeller SPY49_RS04550 PF04203 Sortase family SPY49_RS04555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPY49_RS04565 PF00781 Diacylglycerol kinase catalytic domain SPY49_RS04575 PF08876 SPY49_RS04575 SPY49_RS04580 PF01926 50S ribosome-binding GTPase SPY49_RS04585 PF01351 Ribonuclease HII SPY49_RS04590 PF02481 DNA recombination-mediator protein A SPY49_RS04595 PF01131 DNA topoisomerase SPY49_RS04595 PF01396 SPY49_RS04595 SPY49_RS04595 PF01751 Toprim domain SPY49_RS04600 PF03466 LysR substrate binding domain SPY49_RS04605 PF13303 SPY49_RS04605 SPY49_RS04610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SPY49_RS04610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SPY49_RS04615 PF16264 SPY49_RS04615 SPY49_RS04620 PF11750 SPY49_RS04620 SPY49_RS04625 PF01134 Glucose inhibited division protein A SPY49_RS04630 PF00682 HMGL-like SPY49_RS04630 PF02436 Conserved carboxylase domain SPY49_RS04635 PF04277 SPY49_RS04635 SPY49_RS04640 PF00364 Biotin-requiring enzyme SPY49_RS04645 PF03977 SPY49_RS04645 SPY49_RS04650 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SPY49_RS04655 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS04655 PF07729 FCD domain SPY49_RS04660 PF03600 Citrate transporter SPY49_RS04675 PF03977 SPY49_RS04675 SPY49_RS04685 PF06857 SPY49_RS04685 SPY49_RS04690 PF03328 HpcH/HpaI aldolase/citrate lyase family SPY49_RS04695 PF04223 Citrate lyase, alpha subunit (CitF) SPY49_RS04700 PF03802 SPY49_RS04700 SPY49_RS04705 PF00682 HMGL-like SPY49_RS04705 PF02436 Conserved carboxylase domain SPY49_RS04710 PF08218 Citrate lyase ligase C-terminal domain SPY49_RS04720 PF00589 Phage integrase family SPY49_RS04720 PF13495 Phage integrase, N-terminal SAM-like domain SPY49_RS04725 PF00717 Peptidase S24-like SPY49_RS04725 PF01381 Helix-turn-helix SPY49_RS04730 PF00448 SRP54-type protein, GTPase domain SPY49_RS04730 PF02881 SRP54-type protein, helical bundle domain SPY49_RS04730 PF02978 Signal peptide binding domain SPY49_RS04735 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SPY49_RS04740 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS04740 PF07702 UTRA domain SPY49_RS04750 PF00117 Glutamine amidotransferase class-I SPY49_RS04750 PF00958 GMP synthase C terminal domain SPY49_RS04750 PF02540 NAD synthase SPY49_RS04755 PF02388 FemAB family SPY49_RS04760 PF00005 ABC transporter SPY49_RS04760 PF12848 ABC transporter SPY49_RS04765 PF07155 ECF-type riboflavin transporter, S component SPY49_RS04770 PF08543 Phosphomethylpyrimidine kinase SPY49_RS04775 PF00155 Aminotransferase class I and II SPY49_RS04775 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS04780 PF03477 ATP cone domain SPY49_RS04785 PF13091 PLD-like domain SPY49_RS04790 PF01268 Formate--tetrahydrofolate ligase SPY49_RS04795 PF03099 Biotin/lipoate A/B protein ligase family SPY49_RS04795 PF10437 Bacterial lipoate protein ligase C-terminus SPY49_RS04805 PF01661 Macro domain SPY49_RS04810 PF01597 Glycine cleavage H-protein SPY49_RS04815 PF00296 Luciferase-like monooxygenase SPY49_RS04820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SPY49_RS04825 PF03099 Biotin/lipoate A/B protein ligase family SPY49_RS04830 PF04127 DNA / pantothenate metabolism flavoprotein SPY49_RS04835 PF02441 Flavoprotein SPY49_RS04840 PF12822 Protein of unknown function (DUF3816) SPY49_RS04845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPY49_RS04845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPY49_RS04845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPY49_RS04845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPY49_RS04850 PF02653 SPY49_RS04850 SPY49_RS04855 PF02653 SPY49_RS04855 SPY49_RS04860 PF00005 ABC transporter SPY49_RS04865 PF02608 Basic membrane protein SPY49_RS04870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPY49_RS04875 PF05175 Methyltransferase small domain SPY49_RS04880 PF00485 Phosphoribulokinase / Uridine kinase family SPY49_RS04885 PF01649 Ribosomal protein S20 SPY49_RS04890 PF00512 His Kinase A (phospho-acceptor) domain SPY49_RS04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS04895 PF00072 Response regulator receiver domain SPY49_RS04895 PF00486 Transcriptional regulatory protein, C terminal SPY49_RS04900 PF01433 Peptidase family M1 SPY49_RS04900 PF11838 ERAP1-like C-terminal domain SPY49_RS04905 PF01895 PhoU domain SPY49_RS04910 PF00005 ABC transporter SPY49_RS04915 PF00005 ABC transporter SPY49_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS04930 PF12849 PBP superfamily domain SPY49_RS04935 PF01189 NOL1/NOP2/sun family SPY49_RS04935 PF13636 pre-rRNA processing and ribosome biogenesis SPY49_RS04935 PF17125 SPY49_RS04935 SPY49_RS04935 PF17126 SPY49_RS04935 SPY49_RS04940 PF00459 Inositol monophosphatase family SPY49_RS04945 PF05256 Uncharacterised protein family (UPF0223) SPY49_RS04950 PF03960 ArsC family SPY49_RS04955 PF01687 Riboflavin kinase SPY49_RS04955 PF06574 FAD synthetase SPY49_RS04960 PF01509 TruB family pseudouridylate synthase (N terminal domain) SPY49_RS04960 PF16198 SPY49_RS04960 SPY49_RS04965 PF09903 SPY49_RS04965 SPY49_RS04970 PF06081 SPY49_RS04970 SPY49_RS04970 PF11728 DUF939 C-terminal domain SPY49_RS04980 PF02687 SPY49_RS04980 SPY49_RS04985 PF00005 ABC transporter SPY49_RS04990 PF00440 Bacterial regulatory proteins, tetR family SPY49_RS04995 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS04995 PF02080 TrkA-C domain SPY49_RS05000 PF03780 SPY49_RS05000 SPY49_RS05005 PF05532 CsbD-like SPY49_RS05010 PF03780 SPY49_RS05010 SPY49_RS05015 PF10031 SPY49_RS05015 SPY49_RS05025 PF04226 SPY49_RS05025 SPY49_RS05030 PF00580 UvrD/REP helicase N-terminal domain SPY49_RS05030 PF13361 UvrD-like helicase C-terminal domain SPY49_RS05035 PF01235 SPY49_RS05035 SPY49_RS05040 PF01545 Cation efflux family SPY49_RS05040 PF16916 SPY49_RS05040 SPY49_RS05045 PF07373 SPY49_RS05045 SPY49_RS05050 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPY49_RS05055 PF00005 ABC transporter SPY49_RS05060 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS05065 PF03831 PhnA protein SPY49_RS05065 PF08274 PhnA Zinc-Ribbon SPY49_RS05070 PF01380 SIS domain SPY49_RS05070 PF13522 Glutamine amidotransferase domain SPY49_RS05075 PF00717 Peptidase S24-like SPY49_RS05075 PF10502 Signal peptidase, peptidase S26 SPY49_RS05080 PF00224 Pyruvate kinase, barrel domain SPY49_RS05080 PF02887 Pyruvate kinase, alpha/beta domain SPY49_RS05085 PF00365 Phosphofructokinase SPY49_RS05090 PF01336 OB-fold nucleic acid binding domain SPY49_RS05090 PF02811 PHP domain SPY49_RS05090 PF07733 Bacterial DNA polymerase III alpha subunit SPY49_RS05090 PF14579 Helix-hairpin-helix motif SPY49_RS05095 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS05100 PF00005 ABC transporter SPY49_RS05110 PF09335 SPY49_RS05110 SPY49_RS05115 PF12978 Domain of Unknown Function with PDB structure (DUF3862) SPY49_RS05120 PF00343 Carbohydrate phosphorylase SPY49_RS05125 PF02446 4-alpha-glucanotransferase SPY49_RS05130 PF00356 Bacterial regulatory proteins, lacI family SPY49_RS05130 PF13377 Periplasmic binding protein-like domain SPY49_RS05135 PF13416 Bacterial extracellular solute-binding protein SPY49_RS05140 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS05145 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS05150 PF00665 Integrase core domain SPY49_RS05150 PF13936 Helix-turn-helix domain SPY49_RS05160 PF07859 alpha/beta hydrolase fold SPY49_RS05165 PF04914 DltD C-terminal region SPY49_RS05165 PF04915 DltD N-terminal region SPY49_RS05165 PF04918 DltD central region SPY49_RS05170 PF00550 Phosphopantetheine attachment site SPY49_RS05175 PF03062 SPY49_RS05175 SPY49_RS05180 PF00501 AMP-binding enzyme SPY49_RS05180 PF13193 AMP-binding enzyme C-terminal domain SPY49_RS05185 PF12459 SPY49_RS05185 SPY49_RS05190 PF00271 Helicase conserved C-terminal domain SPY49_RS05190 PF02151 UvrB/uvrC motif SPY49_RS05190 PF04851 Type III restriction enzyme, res subunit SPY49_RS05190 PF12344 Ultra-violet resistance protein B SPY49_RS05195 PF00497 Bacterial extracellular solute-binding proteins, family 3 SPY49_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS05200 PF00005 ABC transporter SPY49_RS05205 PF02378 Phosphotransferase system, EIIC SPY49_RS05210 PF11687 SPY49_RS05210 SPY49_RS05215 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPY49_RS05220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS05225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPY49_RS05225 PF00874 PRD domain SPY49_RS05225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS05225 PF05043 Mga helix-turn-helix domain SPY49_RS05225 PF08279 HTH domain SPY49_RS05230 PF05913 Bacterial protein of unknown function (DUF871) SPY49_RS05235 PF00232 Glycosyl hydrolase family 1 SPY49_RS05240 PF04973 SPY49_RS05240 SPY49_RS05250 PF01018 GTP1/OBG SPY49_RS05250 PF01926 50S ribosome-binding GTPase SPY49_RS05250 PF09269 Domain of unknown function (DUF1967) SPY49_RS05260 PF13276 SPY49_RS05260 SPY49_RS05260 PF13333 SPY49_RS05260 SPY49_RS05270 PF13276 SPY49_RS05270 SPY49_RS05270 PF13333 SPY49_RS05270 SPY49_RS05275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SPY49_RS05275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SPY49_RS05280 PF07158 SPY49_RS05280 SPY49_RS05285 PF01527 Transposase SPY49_RS05290 PF13276 SPY49_RS05290 SPY49_RS05295 PF00665 Integrase core domain SPY49_RS05300 PF00849 RNA pseudouridylate synthase SPY49_RS05300 PF01479 S4 domain SPY49_RS05305 PF03061 Thioesterase superfamily SPY49_RS05310 PF07690 Major Facilitator Superfamily SPY49_RS05315 PF08903 Domain of unknown function (DUF1846) SPY49_RS05320 PF03061 Thioesterase superfamily SPY49_RS05325 PF01048 Phosphorylase superfamily SPY49_RS05330 PF01938 TRAM domain SPY49_RS05330 PF05958 tRNA (Uracil-5-)-methyltransferase SPY49_RS05335 PF03816 Cell envelope-related transcriptional attenuator domain SPY49_RS05340 PF01202 Shikimate kinase SPY49_RS05345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPY49_RS05350 PF03631 SPY49_RS05350 SPY49_RS05355 PF00557 Metallopeptidase family M24 SPY49_RS05360 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS05360 PF00571 CBS domain SPY49_RS05360 PF03061 Thioesterase superfamily SPY49_RS05360 PF07085 DRTGG domain SPY49_RS05375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SPY49_RS05380 PF00438 S-adenosylmethionine synthetase, N-terminal domain SPY49_RS05380 PF02772 S-adenosylmethionine synthetase, central domain SPY49_RS05380 PF02773 S-adenosylmethionine synthetase, C-terminal domain SPY49_RS05385 PF04270 Streptococcal histidine triad protein SPY49_RS05385 PF12799 Leucine Rich repeats (2 copies) SPY49_RS05395 PF12169 DNA polymerase III subunits gamma and tau domain III SPY49_RS05395 PF13177 DNA polymerase III, delta subunit SPY49_RS05400 PF13185 GAF domain SPY49_RS05405 PF13367 SPY49_RS05405 SPY49_RS05415 PF00485 Phosphoribulokinase / Uridine kinase family SPY49_RS05420 PF00270 DEAD/DEAH box helicase SPY49_RS05420 PF00271 Helicase conserved C-terminal domain SPY49_RS05425 PF01522 Polysaccharide deacetylase SPY49_RS05435 PF00391 PEP-utilising enzyme, mobile domain SPY49_RS05435 PF02896 PEP-utilising enzyme, TIM barrel domain SPY49_RS05435 PF05524 PEP-utilising enzyme, N-terminal SPY49_RS05440 PF00381 PTS HPr component phosphorylation site SPY49_RS05445 PF00462 Glutaredoxin SPY49_RS05450 PF00317 Ribonucleotide reductase, all-alpha domain SPY49_RS05450 PF02867 Ribonucleotide reductase, barrel domain SPY49_RS05450 PF08343 Ribonucleotide reductase N-terminal SPY49_RS05455 PF00268 Ribonucleotide reductase, small chain SPY49_RS05460 PF00654 Voltage gated chloride channel SPY49_RS05465 PF01527 Transposase SPY49_RS05475 PF00665 Integrase core domain SPY49_RS05480 PF13333 SPY49_RS05480 SPY49_RS05485 PF02517 CAAX protease self-immunity SPY49_RS05490 PF11368 SPY49_RS05490 SPY49_RS05495 PF01381 Helix-turn-helix SPY49_RS05500 PF01411 tRNA synthetases class II (A) SPY49_RS05500 PF02272 DHHA1 domain SPY49_RS05500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SPY49_RS05505 PF13145 PPIC-type PPIASE domain SPY49_RS05510 PF01596 O-methyltransferase SPY49_RS05515 PF07690 Major Facilitator Superfamily SPY49_RS05520 PF01432 Peptidase family M3 SPY49_RS05520 PF08439 Oligopeptidase F SPY49_RS05525 PF06054 SPY49_RS05525 SPY49_RS05530 PF00849 RNA pseudouridylate synthase SPY49_RS05530 PF01479 S4 domain SPY49_RS05535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SPY49_RS05540 PF02547 Queuosine biosynthesis protein SPY49_RS05545 PF11311 SPY49_RS05545 SPY49_RS05550 PF13354 Beta-lactamase enzyme family SPY49_RS05565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SPY49_RS05565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SPY49_RS05570 PF06144 DNA polymerase III, delta subunit SPY49_RS05575 PF00753 Metallo-beta-lactamase superfamily SPY49_RS05575 PF03772 SPY49_RS05575 SPY49_RS05575 PF13567 SPY49_RS05575 SPY49_RS05580 PF10531 SLBB domain SPY49_RS05580 PF12836 Helix-hairpin-helix motif SPY49_RS05585 PF01553 Acyltransferase SPY49_RS05590 PF05175 Methyltransferase small domain SPY49_RS05595 PF01541 GIY-YIG catalytic domain SPY49_RS05600 PF02705 SPY49_RS05600 SPY49_RS05605 PF00270 DEAD/DEAH box helicase SPY49_RS05605 PF00271 Helicase conserved C-terminal domain SPY49_RS05610 PF00009 Elongation factor Tu GTP binding domain SPY49_RS05610 PF03144 Elongation factor Tu domain 2 SPY49_RS05610 PF16658 SPY49_RS05610 SPY49_RS05615 PF09529 SPY49_RS05615 SPY49_RS05620 PF01225 Mur ligase family, catalytic domain SPY49_RS05620 PF02875 Mur ligase family, glutamate ligase domain SPY49_RS05620 PF08245 Mur ligase middle domain SPY49_RS05625 PF01820 D-ala D-ala ligase N-terminus SPY49_RS05625 PF07478 D-ala D-ala ligase C-terminus SPY49_RS05630 PF02132 RecR protein SPY49_RS05630 PF13662 Toprim domain SPY49_RS05640 PF01226 Formate/nitrite transporter SPY49_RS05650 PF02829 3H domain SPY49_RS05650 PF08279 HTH domain SPY49_RS05655 PF00300 Histidine phosphatase superfamily (branch 1) SPY49_RS05665 PF00122 E1-E2 ATPase SPY49_RS05665 PF00702 haloacid dehalogenase-like hydrolase SPY49_RS05670 PF00216 Bacterial DNA-binding protein SPY49_RS05675 PF09911 SPY49_RS05675 SPY49_RS05680 PF13472 GDSL-like Lipase/Acylhydrolase family SPY49_RS05685 PF02645 Uncharacterised protein, DegV family COG1307 SPY49_RS05695 PF02463 RecF/RecN/SMC N terminal domain SPY49_RS05700 PF01316 Arginine repressor, DNA binding domain SPY49_RS05700 PF02863 Arginine repressor, C-terminal domain SPY49_RS05705 PF01479 S4 domain SPY49_RS05705 PF01728 FtsJ-like methyltransferase SPY49_RS05715 PF02609 Exonuclease VII small subunit SPY49_RS05720 PF02601 SPY49_RS05720 SPY49_RS05720 PF13742 SPY49_RS05720 SPY49_RS05725 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SPY49_RS05725 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SPY49_RS05730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SPY49_RS05730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SPY49_RS05730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SPY49_RS05730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SPY49_RS05735 PF00875 DNA photolyase SPY49_RS05735 PF03441 FAD binding domain of DNA photolyase SPY49_RS05740 PF00005 ABC transporter SPY49_RS05745 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS05750 PF08796 Protein of unknown function (DUF1797) SPY49_RS05755 PF00004 ATPase family associated with various cellular activities (AAA) SPY49_RS05755 PF02151 UvrB/uvrC motif SPY49_RS05755 PF07724 AAA domain (Cdc48 subfamily) SPY49_RS05755 PF10431 C-terminal, D2-small domain, of ClpB protein SPY49_RS05760 PF00293 NUDIX domain SPY49_RS05765 PF08860 Domain of unknown function (DUF1827) SPY49_RS05770 PF00133 tRNA synthetases class I (I, L, M and V) SPY49_RS05770 PF08264 Anticodon-binding domain of tRNA SPY49_RS05775 PF05103 DivIVA protein SPY49_RS05780 PF01479 S4 domain SPY49_RS05785 PF02325 SPY49_RS05785 SPY49_RS05790 PF04472 Protein of unknown function (DUF552) SPY49_RS05795 PF01168 Alanine racemase, N-terminal domain SPY49_RS05800 PF00091 Tubulin/FtsZ family, GTPase domain SPY49_RS05800 PF12327 FtsZ family, C-terminal domain SPY49_RS05805 PF02491 SHS2 domain inserted in FTSA SPY49_RS05805 PF11983 SPY49_RS05805 SPY49_RS05805 PF14450 Cell division protein FtsA SPY49_RS05810 PF08478 POTRA domain, FtsQ-type SPY49_RS05815 PF03033 Glycosyltransferase family 28 N-terminal domain SPY49_RS05815 PF04101 Glycosyltransferase family 28 C-terminal domain SPY49_RS05820 PF02875 Mur ligase family, glutamate ligase domain SPY49_RS05820 PF08245 Mur ligase middle domain SPY49_RS05825 PF11364 SPY49_RS05825 SPY49_RS05830 PF00009 Elongation factor Tu GTP binding domain SPY49_RS05830 PF00679 Elongation factor G C-terminus SPY49_RS05830 PF03144 Elongation factor Tu domain 2 SPY49_RS05835 PF00581 Rhodanese-like domain SPY49_RS05840 PF00480 ROK family SPY49_RS05845 PF06014 Bacterial protein of unknown function (DUF910) SPY49_RS05850 PF00210 Ferritin-like domain SPY49_RS05860 PF04055 Radical SAM superfamily SPY49_RS05860 PF13394 4Fe-4S single cluster domain SPY49_RS05865 PF06265 Protein of unknown function (DUF1027) SPY49_RS05870 PF00356 Bacterial regulatory proteins, lacI family SPY49_RS05870 PF13377 Periplasmic binding protein-like domain SPY49_RS05875 PF05362 Lon protease (S16) C-terminal proteolytic domain SPY49_RS05875 PF13180 PDZ domain SPY49_RS05880 PF01467 Cytidylyltransferase SPY49_RS05885 PF03602 Conserved hypothetical protein 95 SPY49_RS05890 PF03590 Aspartate-ammonia ligase SPY49_RS05895 PF00696 Amino acid kinase family SPY49_RS05900 PF01546 Peptidase family M20/M25/M40 SPY49_RS05910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SPY49_RS05910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SPY49_RS05915 PF13673 Acetyltransferase (GNAT) domain SPY49_RS05920 PF02274 Amidinotransferase SPY49_RS05925 PF00027 Cyclic nucleotide-binding domain SPY49_RS05925 PF13545 Crp-like helix-turn-helix domain SPY49_RS05930 PF01316 Arginine repressor, DNA binding domain SPY49_RS05930 PF02863 Arginine repressor, C-terminal domain SPY49_RS05935 PF03483 B3/4 domain SPY49_RS05940 PF04237 YjbR SPY49_RS05945 PF00672 HAMP domain SPY49_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS05945 PF02743 Cache domain SPY49_RS05945 PF06580 SPY49_RS05945 SPY49_RS05950 PF00072 Response regulator receiver domain SPY49_RS05950 PF12833 Helix-turn-helix domain SPY49_RS05955 PF01625 Peptide methionine sulfoxide reductase SPY49_RS05955 PF01641 SelR domain SPY49_RS05960 PF00578 AhpC/TSA family SPY49_RS05965 PF02683 SPY49_RS05965 SPY49_RS05970 PF09827 CRISPR associated protein Cas2 SPY49_RS05975 PF01867 CRISPR associated protein Cas1 SPY49_RS05980 PF01930 Domain of unknown function DUF83 SPY49_RS05985 PF05107 SPY49_RS05985 SPY49_RS05990 PF09709 SPY49_RS05990 SPY49_RS05995 PF09704 CRISPR-associated protein (Cas_Cas5) SPY49_RS06000 PF00271 Helicase conserved C-terminal domain SPY49_RS06000 PF01966 HD domain SPY49_RS06000 PF04851 Type III restriction enzyme, res subunit SPY49_RS06005 PF00133 tRNA synthetases class I (I, L, M and V) SPY49_RS06005 PF08264 Anticodon-binding domain of tRNA SPY49_RS06005 PF10458 Valyl tRNA synthetase tRNA binding arm SPY49_RS06010 PF13238 AAA domain SPY49_RS06020 PF14520 Helix-hairpin-helix domain SPY49_RS06025 PF08930 Domain of unknown function (DUF1912) SPY49_RS06035 PF00793 DAHP synthetase I family SPY49_RS06040 PF01761 3-dehydroquinate synthase SPY49_RS06045 PF07883 Cupin domain SPY49_RS06050 PF07883 Cupin domain SPY49_RS06055 PF13649 Methyltransferase domain SPY49_RS06060 PF08501 Shikimate dehydrogenase substrate binding domain SPY49_RS06065 PF00703 Glycosyl hydrolases family 2 SPY49_RS06065 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SPY49_RS06065 PF02837 Glycosyl hydrolases family 2, sugar binding domain SPY49_RS06065 PF16355 SPY49_RS06065 SPY49_RS06070 PF00072 Response regulator receiver domain SPY49_RS06070 PF12833 Helix-turn-helix domain SPY49_RS06075 PF06580 SPY49_RS06075 SPY49_RS06080 PF04854 SPY49_RS06080 SPY49_RS06085 PF12010 SPY49_RS06085 SPY49_RS06085 PF13416 Bacterial extracellular solute-binding protein SPY49_RS06090 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS06105 PF00232 Glycosyl hydrolase family 1 SPY49_RS06110 PF07555 beta-N-acetylglucosaminidase SPY49_RS06115 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS06115 PF13377 Periplasmic binding protein-like domain SPY49_RS06120 PF06824 Protein of unknown function (DUF1237) SPY49_RS06125 PF01074 Glycosyl hydrolases family 38 N-terminal domain SPY49_RS06125 PF07748 Glycosyl hydrolases family 38 C-terminal domain SPY49_RS06125 PF09261 Alpha mannosidase, middle domain SPY49_RS06130 PF14501 GHKL domain SPY49_RS06135 PF01938 TRAM domain SPY49_RS06135 PF05958 tRNA (Uracil-5-)-methyltransferase SPY49_RS06140 PF02631 RecX family SPY49_RS06145 PF04167 Protein of unknown function (DUF402) SPY49_RS06200 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SPY49_RS06200 PF16321 SPY49_RS06200 SPY49_RS06210 PF00270 DEAD/DEAH box helicase SPY49_RS06210 PF00271 Helicase conserved C-terminal domain SPY49_RS06215 PF01205 Uncharacterized protein family UPF0029 SPY49_RS06215 PF09186 Domain of unknown function (DUF1949) SPY49_RS06220 PF00291 Pyridoxal-phosphate dependent enzyme SPY49_RS06225 PF00575 S1 RNA binding domain SPY49_RS06230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SPY49_RS06230 PF08282 haloacid dehalogenase-like hydrolase SPY49_RS06235 PF00072 Response regulator receiver domain SPY49_RS06235 PF00196 Bacterial regulatory proteins, luxR family SPY49_RS06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS06240 PF07730 Histidine kinase SPY49_RS06245 PF09922 Cell wall-active antibiotics response protein (DUF2154) SPY49_RS06250 PF00069 Protein kinase domain SPY49_RS06250 PF03793 PASTA domain SPY49_RS06255 PF13672 Protein phosphatase 2C SPY49_RS06260 PF01029 NusB family SPY49_RS06260 PF01189 NOL1/NOP2/sun family SPY49_RS06265 PF00551 Formyl transferase SPY49_RS06265 PF02911 Formyl transferase, C-terminal domain SPY49_RS06270 PF00271 Helicase conserved C-terminal domain SPY49_RS06270 PF04851 Type III restriction enzyme, res subunit SPY49_RS06275 PF01192 RNA polymerase Rpb6 SPY49_RS06280 PF00625 Guanylate kinase SPY49_RS06285 PF00013 KH domain SPY49_RS06285 PF01966 HD domain SPY49_RS06285 PF12072 SPY49_RS06285 SPY49_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SPY49_RS06290 PF03466 LysR substrate binding domain SPY49_RS06295 PF00108 Thiolase, N-terminal domain SPY49_RS06295 PF02803 Thiolase, C-terminal domain SPY49_RS06300 PF01144 Coenzyme A transferase SPY49_RS06305 PF01144 Coenzyme A transferase SPY49_RS06310 PF13561 Enoyl-(Acyl carrier protein) reductase SPY49_RS06315 PF02447 SPY49_RS06315 SPY49_RS06320 PF02664 S-Ribosylhomocysteinase (LuxS) SPY49_RS06330 PF01170 Putative RNA methylase family UPF0020 SPY49_RS06330 PF02926 THUMP domain SPY49_RS06335 PF05103 DivIVA protein SPY49_RS06340 PF06908 Protein of unknown function (DUF1273) SPY49_RS06345 PF03838 Recombination protein U SPY49_RS06350 PF00905 Penicillin binding protein transpeptidase domain SPY49_RS06350 PF00912 Transglycosylase SPY49_RS06355 PF03051 Peptidase C1-like family SPY49_RS06360 PF02540 NAD synthase SPY49_RS06365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SPY49_RS06370 PF00324 Amino acid permease SPY49_RS06375 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS06380 PF13268 SPY49_RS06380 SPY49_RS06385 PF00005 ABC transporter SPY49_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS06395 PF00270 DEAD/DEAH box helicase SPY49_RS06395 PF00271 Helicase conserved C-terminal domain SPY49_RS06400 PF00953 Glycosyl transferase family 4 SPY49_RS06400 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SPY49_RS06405 PF00905 Penicillin binding protein transpeptidase domain SPY49_RS06405 PF03717 Penicillin-binding Protein dimerisation domain SPY49_RS06405 PF03793 PASTA domain SPY49_RS06410 PF04977 Septum formation initiator SPY49_RS06415 PF01795 MraW methylase family SPY49_RS06425 PF00171 Aldehyde dehydrogenase family SPY49_RS06430 PF00696 Amino acid kinase family SPY49_RS06440 PF00005 ABC transporter SPY49_RS06445 PF08951 Enterocin A Immunity SPY49_RS06450 PF00456 Transketolase, thiamine diphosphate binding domain SPY49_RS06450 PF02779 Transketolase, pyrimidine binding domain SPY49_RS06450 PF02780 Transketolase, C-terminal domain SPY49_RS06455 PF00923 Transaldolase SPY49_RS06460 PF05043 Mga helix-turn-helix domain SPY49_RS06465 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS06470 PF00230 Major intrinsic protein SPY49_RS06475 PF01266 FAD dependent oxidoreductase SPY49_RS06475 PF16901 SPY49_RS06475 SPY49_RS06480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SPY49_RS06480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SPY49_RS06485 PF03413 Peptidase propeptide and YPEB domain SPY49_RS06490 PF05979 Bacterial protein of unknown function (DUF896) SPY49_RS06495 PF02092 SPY49_RS06495 SPY49_RS06500 PF02091 Glycyl-tRNA synthetase alpha subunit SPY49_RS06505 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SPY49_RS06510 PF00248 Aldo/keto reductase family SPY49_RS06515 PF01979 Amidohydrolase family SPY49_RS06520 PF01895 PhoU domain SPY49_RS06520 PF02690 SPY49_RS06520 SPY49_RS06530 PF02645 Uncharacterised protein, DegV family COG1307 SPY49_RS06535 PF00440 Bacterial regulatory proteins, tetR family SPY49_RS06540 PF08282 haloacid dehalogenase-like hydrolase SPY49_RS06545 PF03458 SPY49_RS06545 SPY49_RS06550 PF01791 DeoC/LacD family aldolase SPY49_RS06560 PF02502 Ribose/Galactose Isomerase SPY49_RS06565 PF02502 Ribose/Galactose Isomerase SPY49_RS06570 PF03611 SPY49_RS06570 SPY49_RS06575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS06580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPY49_RS06585 PF00455 SPY49_RS06585 SPY49_RS06585 PF08220 DeoR-like helix-turn-helix domain SPY49_RS06590 PF00403 Heavy-metal-associated domain SPY49_RS06595 PF00122 E1-E2 ATPase SPY49_RS06595 PF00403 Heavy-metal-associated domain SPY49_RS06595 PF00702 haloacid dehalogenase-like hydrolase SPY49_RS06600 PF03965 Penicillinase repressor SPY49_RS06605 PF07859 alpha/beta hydrolase fold SPY49_RS06610 PF02033 Ribosome-binding factor A SPY49_RS06615 PF00009 Elongation factor Tu GTP binding domain SPY49_RS06615 PF04760 Translation initiation factor IF-2, N-terminal region SPY49_RS06615 PF11987 Translation-initiation factor 2 SPY49_RS06620 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SPY49_RS06625 PF04296 Protein of unknown function (DUF448) SPY49_RS06630 PF08529 NusA N-terminal domain SPY49_RS06630 PF13184 NusA-like KH domain SPY49_RS06635 PF02576 Uncharacterised BCR, YhbC family COG0779 SPY49_RS06645 PF02390 Putative methyltransferase SPY49_RS06650 PF01636 Phosphotransferase enzyme family SPY49_RS06655 PF05975 SPY49_RS06655 SPY49_RS06660 PF00005 ABC transporter SPY49_RS06665 PF01230 HIT domain SPY49_RS06675 PF03816 Cell envelope-related transcriptional attenuator domain SPY49_RS06680 PF00583 Acetyltransferase (GNAT) family SPY49_RS06685 PF02367 Uncharacterised P-loop hydrolase UPF0079 SPY49_RS06690 PF00860 Permease family SPY49_RS06700 PF03610 PTS system fructose IIA component SPY49_RS06700 PF03830 PTS system sorbose subfamily IIB component SPY49_RS06705 PF03609 SPY49_RS06705 SPY49_RS06710 PF03613 SPY49_RS06710 SPY49_RS06715 PF06115 SPY49_RS06715 SPY49_RS06720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPY49_RS06720 PF02403 Seryl-tRNA synthetase N-terminal domain SPY49_RS06725 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SPY49_RS06730 PF01039 Carboxyl transferase domain SPY49_RS06735 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SPY49_RS06735 PF02785 Biotin carboxylase C-terminal domain SPY49_RS06735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SPY49_RS06740 PF07977 FabA-like domain SPY49_RS06745 PF00364 Biotin-requiring enzyme SPY49_RS06750 PF00109 Beta-ketoacyl synthase, N-terminal domain SPY49_RS06750 PF02801 Beta-ketoacyl synthase, C-terminal domain SPY49_RS06755 PF13561 Enoyl-(Acyl carrier protein) reductase SPY49_RS06760 PF00698 Acyl transferase domain SPY49_RS06765 PF03060 Nitronate monooxygenase SPY49_RS06770 PF00550 Phosphopantetheine attachment site SPY49_RS06775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SPY49_RS06775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SPY49_RS06780 PF01047 MarR family SPY49_RS06785 PF00378 Enoyl-CoA hydratase/isomerase family SPY49_RS06790 PF00226 DnaJ domain SPY49_RS06790 PF00684 DnaJ central domain SPY49_RS06790 PF01556 DnaJ C terminal domain SPY49_RS06795 PF00012 Hsp70 protein SPY49_RS06800 PF01025 GrpE SPY49_RS06805 PF01628 HrcA protein C terminal domain SPY49_RS06805 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SPY49_RS06810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPY49_RS06815 PF02557 D-alanyl-D-alanine carboxypeptidase SPY49_RS06820 PF00300 Histidine phosphatase superfamily (branch 1) SPY49_RS06825 PF04226 SPY49_RS06825 SPY49_RS06835 PF02637 GatB domain SPY49_RS06835 PF02934 GatB/GatE catalytic domain SPY49_RS06840 PF01425 Amidase SPY49_RS06845 PF02686 Glu-tRNAGln amidotransferase C subunit SPY49_RS06850 PF02896 PEP-utilising enzyme, TIM barrel domain SPY49_RS06855 PF00857 Isochorismatase family SPY49_RS06860 PF06018 CodY GAF-like domain SPY49_RS06860 PF08222 CodY helix-turn-helix domain SPY49_RS06870 PF00582 Universal stress protein family SPY49_RS06875 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SPY49_RS06875 PF08282 haloacid dehalogenase-like hydrolase SPY49_RS06880 PF00710 Asparaginase SPY49_RS06890 PF00005 ABC transporter SPY49_RS06895 PF00270 DEAD/DEAH box helicase SPY49_RS06895 PF00271 Helicase conserved C-terminal domain SPY49_RS06895 PF17191 SPY49_RS06895 SPY49_RS06900 PF00005 ABC transporter SPY49_RS06905 PF02361 Cobalt transport protein SPY49_RS06910 PF09605 SPY49_RS06910 SPY49_RS06915 PF00005 ABC transporter SPY49_RS06915 PF00664 ABC transporter transmembrane region SPY49_RS06920 PF00005 ABC transporter SPY49_RS06920 PF00664 ABC transporter transmembrane region SPY49_RS06925 PF00005 ABC transporter SPY49_RS06930 PF01032 FecCD transport family SPY49_RS06935 PF01497 Periplasmic binding protein SPY49_RS06940 PF11545 Cell surface heme-binding protein Shp SPY49_RS06945 PF05031 Iron Transport-associated domain SPY49_RS06945 PF07550 SPY49_RS06945 SPY49_RS06945 PF13855 Leucine rich repeat SPY49_RS06950 PF05257 CHAP domain SPY49_RS06955 PF00842 Alanine racemase, C-terminal domain SPY49_RS06955 PF01168 Alanine racemase, N-terminal domain SPY49_RS06960 PF01648 4'-phosphopantetheinyl transferase superfamily SPY49_RS06965 PF01043 SecA preprotein cross-linking domain SPY49_RS06965 PF02810 SEC-C motif SPY49_RS06965 PF07516 SecA Wing and Scaffold domain SPY49_RS06965 PF07517 SecA DEAD-like domain SPY49_RS06975 PF01609 Transposase DDE domain SPY49_RS06975 PF13808 SPY49_RS06975 SPY49_RS06980 PF01238 Phosphomannose isomerase type I SPY49_RS06985 PF00480 ROK family SPY49_RS06990 PF00704 Glycosyl hydrolases family 18 SPY49_RS06995 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPY49_RS06995 PF00367 phosphotransferase system, EIIB SPY49_RS06995 PF02378 Phosphotransferase system, EIIC SPY49_RS07000 PF00251 Glycosyl hydrolases family 32 N-terminal domain SPY49_RS07000 PF08244 Glycosyl hydrolases family 32 C terminal SPY49_RS07005 PF00356 Bacterial regulatory proteins, lacI family SPY49_RS07005 PF13377 Periplasmic binding protein-like domain SPY49_RS07010 PF01029 NusB family SPY49_RS07015 PF03780 SPY49_RS07015 SPY49_RS07020 PF01132 Elongation factor P (EF-P) OB domain SPY49_RS07020 PF08207 Elongation factor P (EF-P) KOW-like domain SPY49_RS07020 PF09285 Elongation factor P, C-terminal SPY49_RS07025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SPY49_RS07030 PF00557 Metallopeptidase family M24 SPY49_RS07030 PF01321 Creatinase/Prolidase N-terminal domain SPY49_RS07035 PF00005 ABC transporter SPY49_RS07040 PF01544 CorA-like Mg2+ transporter protein SPY49_RS07045 PF06570 SPY49_RS07045 SPY49_RS07050 PF01084 Ribosomal protein S18 SPY49_RS07055 PF00436 Single-strand binding protein family SPY49_RS07060 PF01250 Ribosomal protein S6 SPY49_RS07070 PF00633 Helix-hairpin-helix motif SPY49_RS07070 PF00730 HhH-GPD superfamily base excision DNA repair protein SPY49_RS07070 PF14815 NUDIX domain SPY49_RS07075 PF01381 Helix-turn-helix SPY49_RS07080 PF00085 Thioredoxin SPY49_RS07085 PF01569 PAP2 superfamily SPY49_RS07090 PF00488 MutS domain V SPY49_RS07090 PF01713 Smr domain SPY49_RS07095 PF02674 SPY49_RS07095 SPY49_RS07105 PF01351 Ribonuclease HII SPY49_RS07105 PF11858 Domain of unknown function (DUF3378) SPY49_RS07110 PF00717 Peptidase S24-like SPY49_RS07115 PF13538 UvrD-like helicase C-terminal domain SPY49_RS07115 PF13604 AAA domain SPY49_RS07115 PF14490 Helix-hairpin-helix containing domain SPY49_RS07125 PF00817 impB/mucB/samB family SPY49_RS07125 PF11798 IMS family HHH motif SPY49_RS07125 PF11799 impB/mucB/samB family C-terminal domain SPY49_RS07130 PF01228 Glycine radical SPY49_RS07130 PF02901 Pyruvate formate lyase SPY49_RS07135 PF00144 Beta-lactamase SPY49_RS07140 PF14506 CppA N-terminal SPY49_RS07140 PF14507 CppA C-terminal SPY49_RS07150 PF00230 Major intrinsic protein SPY49_RS07155 PF07690 Major Facilitator Superfamily SPY49_RS07160 PF13545 Crp-like helix-turn-helix domain SPY49_RS07165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SPY49_RS07165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPY49_RS07165 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPY49_RS07170 PF01381 Helix-turn-helix SPY49_RS07175 PF01381 Helix-turn-helix SPY49_RS07185 PF13930 DNA/RNA non-specific endonuclease SPY49_RS07195 PF03904 SPY49_RS07195 SPY49_RS07200 PF13274 SPY49_RS07200 SPY49_RS07205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SPY49_RS07205 PF05257 CHAP domain SPY49_RS07205 PF08460 Bacterial SH3 domain SPY49_RS07215 PF04531 SPY49_RS07215 SPY49_RS07225 PF07104 SPY49_RS07225 SPY49_RS07230 PF07902 SPY49_RS07230 SPY49_RS07235 PF07212 Hyaluronidase protein (HylP) SPY49_RS07240 PF06605 Prophage endopeptidase tail SPY49_RS07245 PF05709 Phage tail protein SPY49_RS07260 PF12363 SPY49_RS07260 SPY49_RS07265 PF06199 SPY49_RS07265 SPY49_RS07275 PF04883 SPY49_RS07275 SPY49_RS07285 PF05135 Phage gp6-like head-tail connector protein SPY49_RS07290 PF12949 HeH/LEM domain SPY49_RS07295 PF03864 Phage major capsid protein E SPY49_RS07305 PF14265 SPY49_RS07305 SPY49_RS07325 PF03496 ADP-ribosyltransferase exoenzyme SPY49_RS07325 PF04233 SPY49_RS07325 SPY49_RS07330 PF05133 Phage portal protein, SPP1 Gp6-like SPY49_RS07335 PF04466 Phage terminase large subunit SPY49_RS07340 PF03592 Terminase small subunit SPY49_RS07350 PF07852 SPY49_RS07350 SPY49_RS07365 PF08241 Methyltransferase domain SPY49_RS07375 PF09643 YopX protein SPY49_RS07380 PF07659 SPY49_RS07380 SPY49_RS07405 PF00436 Single-strand binding protein family SPY49_RS07410 PF04404 SPY49_RS07410 SPY49_RS07430 PF01695 IstB-like ATP binding protein SPY49_RS07480 PF13619 SPY49_RS07480 SPY49_RS07485 PF03374 SPY49_RS07485 SPY49_RS07485 PF08346 SPY49_RS07485 SPY49_RS07490 PF01381 Helix-turn-helix SPY49_RS07500 PF02498 SPY49_RS07500 SPY49_RS07500 PF03374 SPY49_RS07500 SPY49_RS07515 PF01381 Helix-turn-helix SPY49_RS07530 PF00717 Peptidase S24-like SPY49_RS07530 PF01381 Helix-turn-helix SPY49_RS07535 PF07553 Host cell surface-exposed lipoprotein SPY49_RS07540 PF00589 Phage integrase family SPY49_RS07540 PF13102 Phage integrase SAM-like domain SPY49_RS07545 PF02575 YbaB/EbfC DNA-binding family SPY49_RS07550 PF13411 MerR HTH family regulatory protein SPY49_RS07555 PF00929 Exonuclease SPY49_RS07560 PF04394 SPY49_RS07560 SPY49_RS07560 PF08279 HTH domain SPY49_RS07570 PF01609 Transposase DDE domain SPY49_RS07575 PF01609 Transposase DDE domain SPY49_RS07575 PF13808 SPY49_RS07575 SPY49_RS07580 PF03486 HI0933-like protein SPY49_RS07585 PF01791 DeoC/LacD family aldolase SPY49_RS07590 PF01773 Na+ dependent nucleoside transporter N-terminus SPY49_RS07590 PF07662 Na+ dependent nucleoside transporter C-terminus SPY49_RS07595 PF01048 Phosphorylase superfamily SPY49_RS07600 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS07605 PF00253 Ribosomal protein S14p/S29e SPY49_RS07610 PF00814 Glycoprotease family SPY49_RS07615 PF13508 Acetyltransferase (GNAT) domain SPY49_RS07620 PF00814 Glycoprotease family SPY49_RS07625 PF07288 Protein of unknown function (DUF1447) SPY49_RS07630 PF00753 Metallo-beta-lactamase superfamily SPY49_RS07630 PF07521 RNA-metabolising metallo-beta-lactamase SPY49_RS07635 PF00120 Glutamine synthetase, catalytic domain SPY49_RS07635 PF03951 Glutamine synthetase, beta-Grasp domain SPY49_RS07640 PF13411 MerR HTH family regulatory protein SPY49_RS07645 PF06081 SPY49_RS07645 SPY49_RS07650 PF00162 Phosphoglycerate kinase SPY49_RS07655 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SPY49_RS07665 PF02734 DAK2 domain SPY49_RS07665 PF13684 Dihydroxyacetone kinase family SPY49_RS07670 PF03780 SPY49_RS07670 SPY49_RS07675 PF00830 Ribosomal L28 family SPY49_RS07680 PF01116 Fructose-bisphosphate aldolase class-II SPY49_RS07690 PF12146 Putative lysophospholipase SPY49_RS07695 PF00117 Glutamine amidotransferase class-I SPY49_RS07695 PF06418 CTP synthase N-terminus SPY49_RS07700 PF05066 HB1, ASXL, restriction endonuclease HTH domain SPY49_RS07705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SPY49_RS07705 PF05697 Bacterial trigger factor protein (TF) SPY49_RS07705 PF05698 Bacterial trigger factor protein (TF) C-terminus SPY49_RS07710 PF00924 Mechanosensitive ion channel SPY49_RS07715 PF04260 Protein of unknown function (DUF436) SPY49_RS07720 PF07155 ECF-type riboflavin transporter, S component SPY49_RS07725 PF08543 Phosphomethylpyrimidine kinase SPY49_RS07730 PF01416 tRNA pseudouridine synthase SPY49_RS07770 PF02595 Glycerate kinase family SPY49_RS07775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SPY49_RS07775 PF04851 Type III restriction enzyme, res subunit SPY49_RS07775 PF12008 Type I restriction and modification enzyme - subunit R C terminal SPY49_RS07780 PF01420 Type I restriction modification DNA specificity domain SPY49_RS07785 PF02384 N-6 DNA Methylase SPY49_RS07785 PF12161 HsdM N-terminal domain SPY49_RS07795 PF00072 Response regulator receiver domain SPY49_RS07795 PF00196 Bacterial regulatory proteins, luxR family SPY49_RS07805 PF02687 SPY49_RS07805 SPY49_RS07810 PF00005 ABC transporter SPY49_RS07815 PF00005 ABC transporter SPY49_RS07820 PF13575 SPY49_RS07820 SPY49_RS07825 PF04604 Type-A lantibiotic SPY49_RS07830 PF00232 Glycosyl hydrolase family 1 SPY49_RS07835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS07835 PF02378 Phosphotransferase system, EIIC SPY49_RS07840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPY49_RS07845 PF01791 DeoC/LacD family aldolase SPY49_RS07850 PF00294 pfkB family carbohydrate kinase SPY49_RS07855 PF02502 Ribose/Galactose Isomerase SPY49_RS07860 PF02502 Ribose/Galactose Isomerase SPY49_RS07865 PF00455 SPY49_RS07865 SPY49_RS07865 PF08220 DeoR-like helix-turn-helix domain SPY49_RS07875 PF05016 Plasmid stabilisation system protein SPY49_RS07880 PF00380 Ribosomal protein S9/S16 SPY49_RS07885 PF00572 Ribosomal protein L13 SPY49_RS07890 PF01381 Helix-turn-helix SPY49_RS07905 PF05991 SPY49_RS07905 SPY49_RS07910 PF00588 SpoU rRNA Methylase family SPY49_RS07910 PF08032 RNA 2'-O ribose methyltransferase substrate binding SPY49_RS07920 PF00636 Ribonuclease III domain SPY49_RS07925 PF01406 tRNA synthetases class I (C) catalytic domain SPY49_RS07925 PF09190 DALR domain SPY49_RS07940 PF00132 Bacterial transferase hexapeptide (six repeats) SPY49_RS07945 PF07179 SPY49_RS07945 SPY49_RS07950 PF00013 KH domain SPY49_RS07950 PF00575 S1 RNA binding domain SPY49_RS07950 PF01138 3' exoribonuclease family, domain 1 SPY49_RS07950 PF03725 3' exoribonuclease family, domain 2 SPY49_RS07950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SPY49_RS07955 PF00923 Transaldolase SPY49_RS07960 PF03611 SPY49_RS07960 SPY49_RS07965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS07970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SPY49_RS07970 PF00874 PRD domain SPY49_RS07975 PF00312 Ribosomal protein S15 SPY49_RS07985 PF01327 Polypeptide deformylase SPY49_RS07990 PF03358 NADPH-dependent FMN reductase SPY49_RS07995 PF01047 MarR family SPY49_RS08000 PF00929 Exonuclease SPY49_RS08000 PF02811 PHP domain SPY49_RS08000 PF07733 Bacterial DNA polymerase III alpha subunit SPY49_RS08000 PF11490 SPY49_RS08000 SPY49_RS08000 PF14480 SPY49_RS08000 SPY49_RS08000 PF14579 Helix-hairpin-helix motif SPY49_RS08005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SPY49_RS08005 PF03129 Anticodon binding domain SPY49_RS08005 PF04073 Aminoacyl-tRNA editing domain SPY49_RS08010 PF02163 Peptidase family M50 SPY49_RS08010 PF13180 PDZ domain SPY49_RS08015 PF01148 Cytidylyltransferase family SPY49_RS08020 PF01255 Putative undecaprenyl diphosphate synthase SPY49_RS08025 PF02699 Preprotein translocase subunit SPY49_RS08030 PF00085 Thioredoxin SPY49_RS08035 PF00128 Alpha amylase, catalytic domain SPY49_RS08035 PF00746 SPY49_RS08035 SPY49_RS08035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SPY49_RS08035 PF03714 Bacterial pullanase-associated domain SPY49_RS08040 PF00128 Alpha amylase, catalytic domain SPY49_RS08040 PF11941 Domain of unknown function (DUF3459) SPY49_RS08045 PF00005 ABC transporter SPY49_RS08045 PF03459 TOBE domain SPY49_RS08050 PF13556 PucR C-terminal helix-turn-helix domain SPY49_RS08055 PF02821 Staphylokinase/Streptokinase family SPY49_RS08060 PF02580 D-Tyr-tRNA(Tyr) deacylase SPY49_RS08065 PF02824 TGS domain SPY49_RS08065 PF04607 Region found in RelA / SpoT proteins SPY49_RS08065 PF13291 ACT domain SPY49_RS08065 PF13328 HD domain SPY49_RS08070 PF00746 SPY49_RS08070 SPY49_RS08070 PF01391 Collagen triple helix repeat (20 copies) SPY49_RS08075 PF07972 NrdI Flavodoxin like SPY49_RS08080 PF03372 Endonuclease/Exonuclease/phosphatase family SPY49_RS08085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPY49_RS08085 PF00367 phosphotransferase system, EIIB SPY49_RS08085 PF02378 Phosphotransferase system, EIIC SPY49_RS08090 PF04452 RNA methyltransferase SPY49_RS08095 PF06325 Ribosomal protein L11 methyltransferase (PrmA) SPY49_RS08110 PF04266 ASCH domain SPY49_RS08115 PF11217 Protein of unknown function (DUF3013) SPY49_RS08120 PF13310 SPY49_RS08120 SPY49_RS08130 PF00665 Integrase core domain SPY49_RS08130 PF13276 SPY49_RS08130 SPY49_RS08140 PF13276 SPY49_RS08140 SPY49_RS08140 PF13333 SPY49_RS08140 SPY49_RS08145 PF13518 Helix-turn-helix domain SPY49_RS08165 PF00425 chorismate binding enzyme SPY49_RS08165 PF01063 Aminotransferase class IV SPY49_RS08170 PF00117 Glutamine amidotransferase class-I SPY49_RS08175 PF00004 ATPase family associated with various cellular activities (AAA) SPY49_RS08175 PF12002 MgsA AAA+ ATPase C terminal SPY49_RS08175 PF16193 SPY49_RS08175 SPY49_RS08185 PF13673 Acetyltransferase (GNAT) domain SPY49_RS08190 PF00005 ABC transporter SPY49_RS08205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SPY49_RS08210 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS08215 PF00528 Binding-protein-dependent transport system inner membrane component SPY49_RS08220 PF00005 ABC transporter SPY49_RS08225 PF00005 ABC transporter SPY49_RS08230 PF05532 CsbD-like SPY49_RS08235 PF04270 Streptococcal histidine triad protein SPY49_RS08240 PF01297 Periplasmic solute binding protein family SPY49_RS08245 PF04650 SPY49_RS08245 SPY49_RS08255 PF00746 SPY49_RS08255 SPY49_RS08255 PF02370 M protein repeat SPY49_RS08255 PF04650 SPY49_RS08255 SPY49_RS08260 PF00746 SPY49_RS08260 SPY49_RS08260 PF02370 M protein repeat SPY49_RS08260 PF04650 SPY49_RS08260 SPY49_RS08265 PF00746 SPY49_RS08265 SPY49_RS08265 PF04650 SPY49_RS08265 SPY49_RS08270 PF05043 Mga helix-turn-helix domain SPY49_RS08270 PF08270 SPY49_RS08270 SPY49_RS08270 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SPY49_RS08280 PF05257 CHAP domain SPY49_RS08285 PF00512 His Kinase A (phospho-acceptor) domain SPY49_RS08285 PF00672 HAMP domain SPY49_RS08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS08290 PF00072 Response regulator receiver domain SPY49_RS08290 PF00486 Transcriptional regulatory protein, C terminal SPY49_RS08295 PF02687 SPY49_RS08295 SPY49_RS08295 PF12704 MacB-like periplasmic core domain SPY49_RS08300 PF00005 ABC transporter SPY49_RS08305 PF16576 SPY49_RS08305 SPY49_RS08315 PF14131 Domain of unknown function (DUF4298) SPY49_RS08320 PF00746 SPY49_RS08320 SPY49_RS08320 PF02986 Fibronectin binding repeat SPY49_RS08325 PF00092 von Willebrand factor type A domain SPY49_RS08325 PF00746 SPY49_RS08325 SPY49_RS08325 PF02986 Fibronectin binding repeat SPY49_RS08335 PF13145 PPIC-type PPIASE domain SPY49_RS08340 PF13734 Spi protease inhibitor SPY49_RS08345 PF01640 Peptidase C10 family SPY49_RS08345 PF13734 Spi protease inhibitor SPY49_RS08355 PF01223 DNA/RNA non-specific endonuclease SPY49_RS08360 PF04608 Phosphatidylglycerophosphatase A SPY49_RS08365 PF00465 Iron-containing alcohol dehydrogenase SPY49_RS08370 PF00923 Transaldolase SPY49_RS08375 PF01228 Glycine radical SPY49_RS08375 PF02901 Pyruvate formate lyase SPY49_RS08380 PF02378 Phosphotransferase system, EIIC SPY49_RS08385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SPY49_RS08390 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SPY49_RS08395 PF04198 Putative sugar-binding domain SPY49_RS08400 PF00455 SPY49_RS08400 SPY49_RS08400 PF08220 DeoR-like helix-turn-helix domain SPY49_RS08405 PF04055 Radical SAM superfamily SPY49_RS08405 PF13353 4Fe-4S single cluster domain SPY49_RS08410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SPY49_RS08415 PF00905 Penicillin binding protein transpeptidase domain SPY49_RS08415 PF00912 Transglycosylase SPY49_RS08430 PF00849 RNA pseudouridylate synthase SPY49_RS08440 PF03577 SPY49_RS08440 SPY49_RS08445 PF12844 Helix-turn-helix domain SPY49_RS08450 PF00118 TCP-1/cpn60 chaperonin family SPY49_RS08455 PF00166 Chaperonin 10 Kd subunit SPY49_RS08460 PF00004 ATPase family associated with various cellular activities (AAA) SPY49_RS08460 PF02861 Clp amino terminal domain SPY49_RS08460 PF07724 AAA domain (Cdc48 subfamily) SPY49_RS08460 PF10431 C-terminal, D2-small domain, of ClpB protein SPY49_RS08465 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) SPY49_RS08470 PF00313 'Cold-shock' DNA-binding domain SPY49_RS08485 PF01609 Transposase DDE domain SPY49_RS08485 PF13808 SPY49_RS08485 SPY49_RS08490 PF00578 AhpC/TSA family SPY49_RS08490 PF10417 C-terminal domain of 1-Cys peroxiredoxin SPY49_RS08495 PF07992 Pyridine nucleotide-disulphide oxidoreductase SPY49_RS08495 PF13192 Thioredoxin domain SPY49_RS08500 PF01979 Amidohydrolase family SPY49_RS08505 PF01175 Urocanase SPY49_RS08510 PF02971 Formiminotransferase domain SPY49_RS08510 PF07837 Formiminotransferase domain, N-terminal subdomain SPY49_RS08515 PF04961 Formiminotransferase-cyclodeaminase SPY49_RS08520 PF01268 Formate--tetrahydrofolate ligase SPY49_RS08525 PF05962 HutD SPY49_RS08530 PF13520 Amino acid permease SPY49_RS08535 PF00221 Aromatic amino acid lyase SPY49_RS08540 PF00491 Arginase family SPY49_RS08545 PF03704 Bacterial transcriptional activator domain SPY49_RS08545 PF13191 AAA ATPase domain SPY49_RS08550 PF00318 Ribosomal protein S2 SPY49_RS08555 PF00889 Elongation factor TS SPY49_RS08560 PF01431 Peptidase family M13 SPY49_RS08560 PF05649 Peptidase family M13 SPY49_RS08565 PF00128 Alpha amylase, catalytic domain SPY49_RS08565 PF11941 Domain of unknown function (DUF3459) SPY49_RS08570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SPY49_RS08570 PF00367 phosphotransferase system, EIIB SPY49_RS08570 PF02378 Phosphotransferase system, EIIC SPY49_RS08575 PF00392 Bacterial regulatory proteins, gntR family SPY49_RS08575 PF07702 UTRA domain SPY49_RS08585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SPY49_RS08590 PF03883 SPY49_RS08590 SPY49_RS08595 PF13353 4Fe-4S single cluster domain SPY49_RS08600 PF13302 Acetyltransferase (GNAT) domain SPY49_RS08605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SPY49_RS08610 PF03477 ATP cone domain SPY49_RS08610 PF13597 Anaerobic ribonucleoside-triphosphate reductase SPY49_RS08615 PF09852 SPY49_RS08615 SPY49_RS08620 PF06949 SPY49_RS08620 SPY49_RS08625 PF03652 Uncharacterised protein family (UPF0081) SPY49_RS08630 PF06135 SPY49_RS08630 SPY49_RS08635 PF03960 ArsC family SPY49_RS08640 PF00154 recA bacterial DNA recombination protein SPY49_RS08645 PF00994 Probable molybdopterin binding domain SPY49_RS08645 PF02464 Competence-damaged protein SPY49_RS08650 PF03352 Methyladenine glycosylase SPY49_RS08655 PF01330 RuvA N terminal domain SPY49_RS08655 PF07499 RuvA, C-terminal domain SPY49_RS08655 PF14520 Helix-hairpin-helix domain SPY49_RS08660 PF07690 Major Facilitator Superfamily SPY49_RS08665 PF01119 DNA mismatch repair protein, C-terminal domain SPY49_RS08665 PF08676 MutL C terminal dimerisation domain SPY49_RS08665 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPY49_RS08670 PF00488 MutS domain V SPY49_RS08670 PF01624 MutS domain I SPY49_RS08670 PF05188 MutS domain II SPY49_RS08670 PF05190 MutS family domain IV SPY49_RS08670 PF05192 MutS domain III SPY49_RS08685 PF00750 tRNA synthetases class I (R) SPY49_RS08685 PF03485 Arginyl tRNA synthetase N terminal domain SPY49_RS08685 PF05746 DALR anticodon binding domain SPY49_RS08690 PF08951 Enterocin A Immunity SPY49_RS08695 PF02588 SPY49_RS08695 SPY49_RS08695 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPY49_RS08700 PF02588 SPY49_RS08700 SPY49_RS08700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPY49_RS08705 PF02588 SPY49_RS08705 SPY49_RS08705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPY49_RS08710 PF00152 tRNA synthetases class II (D, K and N) SPY49_RS08710 PF01336 OB-fold nucleic acid binding domain SPY49_RS08710 PF02938 GAD domain SPY49_RS08715 PF03129 Anticodon binding domain SPY49_RS08715 PF13393 Histidyl-tRNA synthetase SPY49_RS08720 PF01783 Ribosomal L32p protein family SPY49_RS08725 PF00471 Ribosomal protein L33 SPY49_RS08735 PF03596 SPY49_RS08735 SPY49_RS08740 PF01022 Bacterial regulatory protein, arsR family SPY49_RS08750 PF00005 ABC transporter SPY49_RS08765 PF04018 SPY49_RS08765 SPY49_RS08770 PF00293 NUDIX domain SPY49_RS08775 PF03551 Transcriptional regulator PadR-like family SPY49_RS08780 PF08006 SPY49_RS08780 SPY49_RS08785 PF13349 SPY49_RS08785 SPY49_RS08790 PF12051 SPY49_RS08790 SPY49_RS08795 PF00440 Bacterial regulatory proteins, tetR family SPY49_RS08800 PF00163 Ribosomal protein S4/S9 N-terminal domain SPY49_RS08800 PF01479 S4 domain SPY49_RS08805 PF06257 Protein of unknown function (DUF1021) SPY49_RS08810 PF00772 DnaB-like helicase N terminal domain SPY49_RS08810 PF03796 DnaB-like helicase C terminal domain SPY49_RS08815 PF01281 Ribosomal protein L9, N-terminal domain SPY49_RS08815 PF03948 Ribosomal protein L9, C-terminal domain SPY49_RS08820 PF01368 DHH family SPY49_RS08820 PF02272 DHHA1 domain SPY49_RS08825 PF01134 Glucose inhibited division protein A SPY49_RS08825 PF13932 GidA associated domain 3 SPY49_RS08835 PF03054 tRNA methyl transferase SPY49_RS08840 PF01842 ACT domain SPY49_RS08840 PF03315 Serine dehydratase beta chain SPY49_RS08845 PF03313 SPY49_RS08845 SPY49_RS08850 PF01464 Transglycosylase SLT domain SPY49_RS08855 PF02361 Cobalt transport protein SPY49_RS08860 PF00005 ABC transporter SPY49_RS08865 PF00005 ABC transporter SPY49_RS08870 PF01066 CDP-alcohol phosphatidyltransferase SPY49_RS08875 PF13413 Helix-turn-helix domain SPY49_RS08880 PF00675 Insulinase (Peptidase family M16) SPY49_RS08880 PF05193 Peptidase M16 inactive domain SPY49_RS08885 PF05193 Peptidase M16 inactive domain SPY49_RS08890 PF00535 Glycosyl transferase family 2 SPY49_RS08895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SPY49_RS08895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SPY49_RS08895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SPY49_RS08900 PF00483 Nucleotidyl transferase SPY49_RS08905 PF13275 S4 domain SPY49_RS08910 PF02463 RecF/RecN/SMC N terminal domain SPY49_RS08915 PF06800 SPY49_RS08915 SPY49_RS08920 PF00478 IMP dehydrogenase / GMP reductase domain SPY49_RS08920 PF00571 CBS domain SPY49_RS08925 PF00579 tRNA synthetases class I (W and Y) SPY49_RS08930 PF02588 SPY49_RS08930 SPY49_RS08930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SPY49_RS08935 PF00005 ABC transporter SPY49_RS08935 PF12848 ABC transporter SPY49_RS08940 PF09586 SPY49_RS08940 SPY49_RS08955 PF00665 Integrase core domain SPY49_RS08955 PF13936 Helix-turn-helix domain SPY49_RS08965 PF02590 Predicted SPOUT methyltransferase SPY49_RS08970 PF13180 PDZ domain SPY49_RS08970 PF13365 Trypsin-like peptidase domain SPY49_RS08975 PF02195 ParB-like nuclease domain SPY49_RS09000 PF09681 SPY49_RS09000