locus-tag	class	description
AYM92_RS00010	COG0592	DNA-directed DNA polymerase activity
AYM92_RS00020	COG0012	GTP binding
AYM92_RS00030	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AYM92_RS00035	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AYM92_RS00060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AYM92_RS00065	COG0531	amino acid
AYM92_RS00240	COG3942	CHAP domain
AYM92_RS00260	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AYM92_RS00270	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AYM92_RS00285	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AYM92_RS00305	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AYM92_RS00320	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AYM92_RS00335	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AYM92_RS00350	COG1012	belongs to the aldehyde dehydrogenase family
AYM92_RS00350	COG1454	alcohol dehydrogenase
AYM92_RS00355	COG1064	alcohol dehydrogenase
AYM92_RS00360	COG0534	Mate efflux family protein
AYM92_RS00470	COG0201	protein transport
AYM92_RS00590	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AYM92_RS00615	COG1121	(ABC) transporter
AYM92_RS00620	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AYM92_RS00635	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AYM92_RS00655	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AYM92_RS00660	COG1459	type II secretion system
AYM92_RS00665	COG4537	Required for transformation and DNA binding
AYM92_RS00705	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AYM92_RS00710	COG1363	Peptidase, m42
AYM92_RS00725	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AYM92_RS00730	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AYM92_RS00745	COG1428	Deoxynucleoside kinase
AYM92_RS00750	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AYM92_RS00810	COG2031	fatty acid transporter
AYM92_RS00825	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AYM92_RS00840	COG0251	oxidation-reduction process
AYM92_RS00855	COG1269	ATP hydrolysis coupled proton transport
AYM92_RS00860	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AYM92_RS00870	COG1527	subunit (C
AYM92_RS00875	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
AYM92_RS00910	COG1744	ABC transporter substrate-binding protein PnrA-like
AYM92_RS00950	COG0626	cystathionine gamma-synthase activity
AYM92_RS00980	COG3623	hexulose-6-phosphate isomerase
AYM92_RS01005	COG4175	Glycine betaine
AYM92_RS01005	COG3448	diguanylate cyclase activity
AYM92_RS01015	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AYM92_RS01015	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AYM92_RS01035	COG3969	phosphoadenosine phosphosulfate
AYM92_RS01040	COG1475	DNA binding
AYM92_RS01050	COG2801	Transposase and inactivated derivatives
AYM92_RS01055	COG2801	Transposase and inactivated derivatives
AYM92_RS01060	COG2801	Transposase and inactivated derivatives
AYM92_RS01075	COG0157	Belongs to the NadC ModD family
AYM92_RS01080	COG2801	Transposase and inactivated derivatives
AYM92_RS01110	COG1268	BioY protein
AYM92_RS01115	COG1234	tRNA 3'-trailer cleavage
AYM92_RS01150	COG0705	Rhomboid family
AYM92_RS01150	COG0457	Tetratricopeptide repeat
AYM92_RS01170	COG1132	(ABC) transporter
AYM92_RS01175	COG1132	(ABC) transporter
AYM92_RS01185	COG0756	dUTP diphosphatase activity
AYM92_RS01210	COG3290	protein histidine kinase activity
AYM92_RS01235	COG1847	R3H domain protein
AYM92_RS01255	COG1175	transmembrane transport
AYM92_RS01260	COG0395	ABC-type sugar transport system, permease component
AYM92_RS01270	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AYM92_RS01285	COG0084	hydrolase, TatD family'
AYM92_RS01310	COG1564	THIamine pyrophosphokinase
AYM92_RS01325	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AYM92_RS01365	COG0765	amino acid transport
AYM92_RS01385	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AYM92_RS01395	COG0719	Fe-S assembly protein
AYM92_RS01400	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AYM92_RS01415	COG1686	Belongs to the peptidase S11 family
AYM92_RS01420	COG1686	Belongs to the peptidase S11 family
AYM92_RS01425	COG4166	transmembrane transport
AYM92_RS01430	COG0601	transmembrane transport
AYM92_RS01435	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AYM92_RS01440	COG0444	Belongs to the ABC transporter superfamily
AYM92_RS01450	COG2801	Transposase and inactivated derivatives
AYM92_RS01460	COG2801	Transposase and inactivated derivatives
AYM92_RS01465	COG2801	Transposase and inactivated derivatives
AYM92_RS01470	COG2801	Transposase and inactivated derivatives
AYM92_RS01515	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AYM92_RS01520	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AYM92_RS01525	COG1534	Rna-binding protein
AYM92_RS01535	COG1713	HD superfamily hydrolase involved in NAD metabolism
AYM92_RS01540	COG0799	negative regulation of ribosome biogenesis
AYM92_RS01545	COG2226	methyltransferase
AYM92_RS01565	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AYM92_RS01570	COG1464	Belongs to the NlpA lipoprotein family
AYM92_RS01585	COG1114	Component of the transport system for branched-chain amino acids
AYM92_RS01595	COG0569	domain protein
AYM92_RS01600	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AYM92_RS01610	COG1704	LemA family
AYM92_RS01625	COG0745	RESPONSE REGULATOR receiver
AYM92_RS01630	COG5002	protein histidine kinase activity
AYM92_RS01645	COG1484	DNA-dependent DNA replication
AYM92_RS01655	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AYM92_RS01675	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AYM92_RS01690	COG1254	Belongs to the acylphosphatase family
AYM92_RS01695	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AYM92_RS01750	COG1187	pseudouridine synthase activity
AYM92_RS01765	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AYM92_RS01770	COG0671	phosphoesterase, PA-phosphatase related
AYM92_RS01775	COG1242	4 iron, 4 sulfur cluster binding
AYM92_RS01780	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AYM92_RS01785	COG1253	flavin adenine dinucleotide binding
AYM92_RS01790	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AYM92_RS01805	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AYM92_RS01810	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AYM92_RS01815	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AYM92_RS01820	COG1120	ATPase activity
AYM92_RS01830	COG2244	polysaccharide biosynthetic process
AYM92_RS01860	COG0470	DNA polymerase III
AYM92_RS01890	COG1393	Belongs to the ArsC family
AYM92_RS01905	COG1609	Transcriptional regulator
AYM92_RS01910	COG0561	phosphatase activity
AYM92_RS01915	COG0708	Exodeoxyribonuclease III
AYM92_RS01925	COG1304	FMN binding
AYM92_RS02005	COG1028	Short-chain dehydrogenase reductase Sdr
AYM92_RS02010	COG0673	inositol 2-dehydrogenase activity
AYM92_RS02025	COG0494	nUDIX hydrolase
AYM92_RS02035	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AYM92_RS02125	COG1702	phosphate starvation-inducible protein PhoH
AYM92_RS02130	COG1573	uracil-dna glycosylase
AYM92_RS02140	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AYM92_RS02235	COG0433	COG0433 Predicted ATPase
AYM92_RS02240	COG2814	Major facilitator Superfamily
AYM92_RS02255	COG0557	exoribonuclease II activity
AYM92_RS02285	COG0463	Glycosyl transferase, family 2
AYM92_RS02295	COG0778	Nitroreductase
AYM92_RS02300	COG0006	proline dipeptidase activity
AYM92_RS02305	COG1609	Transcriptional regulator
AYM92_RS02315	COG0438	transferase activity, transferring glycosyl groups
AYM92_RS02325	COG4555	ABC transporter
AYM92_RS02345	COG0183	Belongs to the thiolase family
AYM92_RS02360	COG0745	RESPONSE REGULATOR receiver
AYM92_RS02365	COG5002	protein histidine kinase activity
AYM92_RS02370	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AYM92_RS02380	COG1196	nuclear chromosome segregation
AYM92_RS02390	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AYM92_RS02485	COG0561	phosphatase activity
AYM92_RS02490	COG0561	phosphatase activity
AYM92_RS02495	COG0552	protein localization to endoplasmic reticulum
AYM92_RS02500	COG0477	Major facilitator Superfamily
AYM92_RS02505	COG3711	transcriptional antiterminator
AYM92_RS02510	COG1263	PTS System
AYM92_RS02510	COG2190	(PTS) system
AYM92_RS02510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AYM92_RS02520	COG3689	TIGRFAM TIGR03943 family protein
AYM92_RS02525	COG0701	Predicted permease
AYM92_RS02535	COG2183	response to ionizing radiation
AYM92_RS02580	COG0826	peptidase U32
AYM92_RS02585	COG4443	Transcriptional Coactivator p15 (PC4)
AYM92_RS02615	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AYM92_RS02640	COG0386	Belongs to the glutathione peroxidase family
AYM92_RS02645	COG1164	Oligoendopeptidase f
AYM92_RS02655	COG0772	Belongs to the SEDS family
AYM92_RS02690	COG1078	dGTPase activity
AYM92_RS02705	COG1609	Transcriptional regulator
AYM92_RS02715	COG3716	PTS system mannose fructose sorbose family IID component
AYM92_RS02720	COG3715	PTS system
AYM92_RS02725	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AYM92_RS02740	COG1028	Short-chain dehydrogenase reductase Sdr
AYM92_RS02755	COG0800	Aldolase
AYM92_RS02760	COG0546	phosphoglycolate phosphatase activity
AYM92_RS02765	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AYM92_RS02775	COG2884	Cell division ATP-binding protein ftsE
AYM92_RS02780	COG2177	Part of the ABC transporter FtsEX involved in
AYM92_RS02795	COG1199	ATP-dependent helicase activity
AYM92_RS02795	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AYM92_RS02800	COG0436	Aminotransferase
AYM92_RS02910	COG3723	Recombinational DNA repair protein, rece pathway
AYM92_RS02970	COG1598	PFAM Uncharacterised protein family UPF0150
AYM92_RS03015	COG0740	serine-type endopeptidase activity
AYM92_RS03105	COG1705	Flagellar rod assembly protein muramidase FlgJ
AYM92_RS03130	COG2188	Transcriptional regulator
AYM92_RS03135	COG2222	sugar isomerase
AYM92_RS03145	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AYM92_RS03150	COG0716	FMN binding
AYM92_RS03160	COG0038	chloride channel
AYM92_RS03235	COG1131	(ABC) transporter
AYM92_RS03260	COG4708	membrane
AYM92_RS03270	COG1597	lipid kinase activity
AYM92_RS03355	COG0577	efflux transmembrane transporter activity
AYM92_RS03365	COG2321	neutral zinc metallopeptidase
AYM92_RS03380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AYM92_RS03390	COG1970	mechanosensitive ion channel activity
AYM92_RS03395	COG0358	DNA primase activity
AYM92_RS03400	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AYM92_RS03405	COG2151	metal-sulfur cluster biosynthetic enzyme
AYM92_RS03450	COG1216	Glycosyl transferase, family 2
AYM92_RS03510	COG1368	sulfuric ester hydrolase activity
AYM92_RS03515	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AYM92_RS03535	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AYM92_RS03540	COG0285	dihydrofolate synthase activity
AYM92_RS03550	COG1104	cysteine desulfurase activity
AYM92_RS03575	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AYM92_RS03585	COG0583	DNA-binding transcription factor activity
AYM92_RS03595	COG0564	pseudouridine synthase activity
AYM92_RS03600	COG5433	transposase activity
AYM92_RS03640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AYM92_RS03645	COG1136	(ABC) transporter
AYM92_RS03650	COG0577	efflux transmembrane transporter activity
AYM92_RS03655	COG0584	glycerophosphoryl diester phosphodiesterase
AYM92_RS03665	COG1837	Belongs to the UPF0109 family
AYM92_RS03715	COG1349	DNA-binding transcription factor activity
AYM92_RS03720	COG1105	Belongs to the carbohydrate kinase PfkB family
AYM92_RS03725	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AYM92_RS03725	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AYM92_RS03725	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AYM92_RS03730	COG1705	Flagellar rod assembly protein muramidase FlgJ
AYM92_RS03730	COG3942	CHAP domain
AYM92_RS03735	COG1705	Flagellar rod assembly protein muramidase FlgJ
AYM92_RS03735	COG1388	LysM domain
AYM92_RS03740	COG2801	Transposase and inactivated derivatives
AYM92_RS03775	COG0488	(ABC) transporter
AYM92_RS03790	COG0242	peptide deformylase activity
AYM92_RS03795	COG0737	Belongs to the 5'-nucleotidase family
AYM92_RS03800	COG2357	RelA SpoT domain protein
AYM92_RS03805	COG0745	RESPONSE REGULATOR receiver
AYM92_RS03840	COG3425	synthase
AYM92_RS03850	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AYM92_RS03910	COG0583	DNA-binding transcription factor activity
AYM92_RS03935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AYM92_RS03940	COG0765	amino acid transport
AYM92_RS03960	COG0187	DNA topoisomerase II activity
AYM92_RS03970	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AYM92_RS03990	COG0539	negative regulation of cytoplasmic translation
AYM92_RS04035	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AYM92_RS04040	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AYM92_RS04050	COG0300	oxidoreductase activity
AYM92_RS04055	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AYM92_RS04055	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AYM92_RS04070	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AYM92_RS04075	COG2384	SAM-dependent methyltransferase
AYM92_RS04085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AYM92_RS04090	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AYM92_RS04100	COG1088	dTDP-glucose 4,6-dehydratase activity
AYM92_RS04105	COG0582	viral genome integration into host DNA
AYM92_RS04225	COG1783	phage Terminase large subunit
AYM92_RS04370	COG1051	belongs to the nudix hydrolase family
AYM92_RS04375	COG0628	permease
AYM92_RS04380	COG0457	Tetratricopeptide repeat
AYM92_RS04385	COG1293	RNA-binding protein homologous to eukaryotic snRNP
AYM92_RS04405	COG1129	ABC transporter
AYM92_RS04425	COG0488	(ABC) transporter
AYM92_RS04430	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AYM92_RS04435	COG0022	dehydrogenase e1 component
AYM92_RS04435	COG0508	dehydrogenase complex catalyzes the overall conversion of
AYM92_RS04440	COG0508	dehydrogenase complex catalyzes the overall conversion of
AYM92_RS04455	COG1695	Transcriptional regulator
AYM92_RS04465	COG0095	Lipoate-protein ligase
AYM92_RS04470	COG3442	glutamine amidotransferase
AYM92_RS04475	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AYM92_RS04480	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AYM92_RS04500	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AYM92_RS04510	COG0647	UMP catabolic process
AYM92_RS04525	COG0105	UTP biosynthetic process
AYM92_RS04560	COG3715	PTS system
AYM92_RS04565	COG3716	PTS system mannose fructose sorbose family IID component
AYM92_RS04570	COG2972	Histidine kinase
AYM92_RS04575	COG2207	Transcriptional regulator
AYM92_RS04575	COG4753	response regulator
AYM92_RS04585	COG1012	belongs to the aldehyde dehydrogenase family
AYM92_RS04600	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AYM92_RS04680	COG1131	(ABC) transporter
AYM92_RS04730	COG0285	dihydrofolate synthase activity
AYM92_RS04750	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AYM92_RS04765	COG1176	ABC-type spermidine putrescine transport system, permease component I
AYM92_RS04770	COG1177	transmembrane transport
AYM92_RS04780	COG4565	transcriptional regulatory protein
AYM92_RS04785	COG3290	protein histidine kinase activity
AYM92_RS04790	COG3493	citrate carrier protein
AYM92_RS04805	COG3700	Belongs to the class B bacterial acid phosphatase family
AYM92_RS04810	COG0038	chloride channel
AYM92_RS04820	COG0628	permease
AYM92_RS04830	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AYM92_RS04845	COG1104	cysteine desulfurase activity
AYM92_RS04860	COG2357	RelA SpoT domain protein
AYM92_RS04870	COG0564	pseudouridine synthase activity
AYM92_RS04875	COG0280	phosphate acetyltransferase
AYM92_RS04880	COG4221	oxidoreductase activity
AYM92_RS04895	COG1174	glycine betaine transport
AYM92_RS04910	COG2233	PERMEase
AYM92_RS04935	COG2890	protein-(glutamine-N5) methyltransferase activity
AYM92_RS04965	COG1132	(ABC) transporter
AYM92_RS04970	COG1132	(ABC) transporter
AYM92_RS04990	COG3764	Sortase (surface protein transpeptidase)
AYM92_RS04995	COG0346	lactoylglutathione lyase activity
AYM92_RS05015	COG1272	protein, Hemolysin III
AYM92_RS05035	COG0758	DNA mediated transformation
AYM92_RS05040	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AYM92_RS05090	COG0511	ligase activity, forming carbon-carbon bonds
AYM92_RS05095	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
AYM92_RS05110	COG2851	Citrate transporter
AYM92_RS05120	COG0511	ligase activity, forming carbon-carbon bonds
AYM92_RS05125	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
AYM92_RS05160	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AYM92_RS05180	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AYM92_RS05190	COG2188	Transcriptional regulator
AYM92_RS05210	COG0488	(ABC) transporter
AYM92_RS05220	COG0351	phosphomethylpyrimidine kinase
AYM92_RS05220	COG0352	thiamine-phosphate diphosphorylase activity
AYM92_RS05225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AYM92_RS05235	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AYM92_RS05235	COG1328	CTP reductase activity
AYM92_RS05240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AYM92_RS05270	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AYM92_RS05280	COG0095	Lipoate-protein ligase
AYM92_RS05290	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AYM92_RS05295	COG4684	Psort location CytoplasmicMembrane, score
AYM92_RS05300	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AYM92_RS05305	COG1079	Belongs to the binding-protein-dependent transport system permease family
AYM92_RS05310	COG4603	Belongs to the binding-protein-dependent transport system permease family
AYM92_RS05315	COG3845	ABC transporter
AYM92_RS05320	COG1744	ABC transporter substrate-binding protein PnrA-like
AYM92_RS05325	COG0295	cytidine deaminase activity
AYM92_RS05330	COG2813	Specifically methylates the guanine in position
AYM92_RS05345	COG5002	protein histidine kinase activity
AYM92_RS05350	COG0745	RESPONSE REGULATOR receiver
AYM92_RS05360	COG0704	Plays a role in the regulation of phosphate uptake
AYM92_RS05375	COG0581	inorganic phosphate transmembrane transporter activity
AYM92_RS05380	COG0573	inorganic phosphate transmembrane transporter activity
AYM92_RS05390	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AYM92_RS05390	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AYM92_RS05395	COG0483	inositol monophosphate 1-phosphatase activity
AYM92_RS05410	COG0196	riboflavin kinase activity
AYM92_RS05440	COG1136	(ABC) transporter
AYM92_RS05440	COG4591	ABC-type transport system involved in lipoprotein release permease component
AYM92_RS05490	COG1115	amino acid carrier protein
AYM92_RS05495	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AYM92_RS05505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AYM92_RS05510	COG1126	abc transporter atp-binding protein
AYM92_RS05515	COG0765	amino acid transport
AYM92_RS05520	COG2824	Alkylphosphonate utilization operon protein PhnA
AYM92_RS05535	COG0469	pyruvate kinase activity
AYM92_RS05550	COG1725	Transcriptional regulator
AYM92_RS05555	COG1131	(ABC) transporter
AYM92_RS05580	COG0058	SHG alpha-glucan phosphorylase activity
AYM92_RS05585	COG1640	4-alpha-glucanotransferase
AYM92_RS05590	COG1609	Transcriptional regulator
AYM92_RS05595	COG2182	Extracellular solute-binding protein
AYM92_RS05600	COG1175	transmembrane transport
AYM92_RS05605	COG3833	ABC-type maltose transport systems, permease component
AYM92_RS05620	COG3833	ABC-type maltose transport systems, permease component
AYM92_RS05625	COG1175	transmembrane transport
AYM92_RS05635	COG0366	Alpha amylase catalytic
AYM92_RS05640	COG2182	Extracellular solute-binding protein
AYM92_RS05650	COG0657	acetylesterase activity
AYM92_RS05655	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AYM92_RS05665	COG1696	Membrane protein involved in D-alanine export
AYM92_RS05685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AYM92_RS05690	COG1126	abc transporter atp-binding protein
AYM92_RS05695	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AYM92_RS05705	COG1447	Phosphotransferase system cellobiose-specific component IIA
AYM92_RS05715	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AYM92_RS05715	COG3711	transcriptional antiterminator
AYM92_RS05725	COG2723	6-phospho-beta-galactosidase activity
AYM92_RS05755	COG1187	pseudouridine synthase activity
AYM92_RS05765	COG2814	Major facilitator Superfamily
AYM92_RS05815	COG4109	DRTGG domain
AYM92_RS05820	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AYM92_RS05850	COG1028	Short-chain dehydrogenase reductase Sdr
AYM92_RS05865	COG0800	Aldolase
AYM92_RS05870	COG2186	Transcriptional regulator
AYM92_RS05875	COG3250	beta-galactosidase activity
AYM92_RS05885	COG2211	Major facilitator Superfamily
AYM92_RS05905	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AYM92_RS05905	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AYM92_RS05915	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AYM92_RS05920	COG1956	GAF domain-containing protein
AYM92_RS05940	COG0513	Belongs to the DEAD box helicase family
AYM92_RS05945	COG0726	polysaccharide deacetylase
AYM92_RS05965	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AYM92_RS05970	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AYM92_RS05990	COG2801	Transposase and inactivated derivatives
AYM92_RS05995	COG2801	Transposase and inactivated derivatives
AYM92_RS06010	COG1476	TRANSCRIPTIONal
AYM92_RS06025	COG4122	O-methyltransferase activity
AYM92_RS06030	COG2223	nitrite transmembrane transporter activity
AYM92_RS06045	COG1187	pseudouridine synthase activity
AYM92_RS06085	COG2333	competence protein COMEC
AYM92_RS06085	COG0658	competence protein
AYM92_RS06090	COG1596	polysaccharide export
AYM92_RS06090	COG1555	photosystem II stabilization
AYM92_RS06095	COG0204	Acyl-transferase
AYM92_RS06100	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AYM92_RS06115	COG0513	Belongs to the DEAD box helicase family
AYM92_RS06135	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AYM92_RS06150	COG0768	penicillin binding
AYM92_RS06155	COG2116	formate transmembrane transporter activity
AYM92_RS06165	COG1827	regulation of RNA biosynthetic process
AYM92_RS06180	COG2217	Heavy metal translocating P-type atpase
AYM92_RS06215	COG1705	Flagellar rod assembly protein muramidase FlgJ
AYM92_RS06225	COG0860	N-Acetylmuramoyl-L-alanine amidase
AYM92_RS06225	COG1388	LysM domain
AYM92_RS06470	COG0582	viral genome integration into host DNA
AYM92_RS06485	COG2755	lipolytic protein G-D-S-L family
AYM92_RS06500	COG0497	DNA recombination
AYM92_RS06505	COG1438	arginine binding
AYM92_RS06510	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AYM92_RS06535	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AYM92_RS06540	COG0415	Belongs to the DNA photolyase family
AYM92_RS06550	COG0765	amino acid transport
AYM92_RS06555	COG4703	Protein of unknown function (DUF1797)
AYM92_RS06560	COG0542	response to heat
AYM92_RS06565	COG0494	nUDIX hydrolase
AYM92_RS06580	COG3599	regulation of cell shape
AYM92_RS06585	COG2302	S4 RNA-binding domain
AYM92_RS06600	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AYM92_RS06635	COG1217	gtp-binding protein TYPA
AYM92_RS06640	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AYM92_RS06645	COG1940	carbohydrate kinase activity
AYM92_RS06655	COG0783	Belongs to the Dps family
AYM92_RS06670	COG4470	Protein conserved in bacteria
AYM92_RS06675	COG1609	Transcriptional regulator
AYM92_RS06680	COG3480	Lon protease (S16) C-terminal proteolytic domain
AYM92_RS06690	COG0742	ribosomal rna small subunit methyltransferase
AYM92_RS06700	COG0549	Belongs to the carbamate kinase family
AYM92_RS06705	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AYM92_RS06710	COG1288	antiporter activity
AYM92_RS06725	COG2235	arginine
AYM92_RS06750	COG2972	Histidine kinase
AYM92_RS06795	COG0860	N-Acetylmuramoyl-L-alanine amidase
AYM92_RS06795	COG1388	LysM domain
AYM92_RS06935	COG1475	DNA binding
AYM92_RS07035	COG3935	DnaD domain protein
AYM92_RS07070	COG3561	AntA/AntB antirepressor
AYM92_RS07080	COG1396	sequence-specific DNA binding
AYM92_RS07105	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AYM92_RS07110	COG0785	Cytochrome C biogenesis protein
AYM92_RS07115	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AYM92_RS07120	COG1518	maintenance of DNA repeat elements
AYM92_RS07185	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AYM92_RS07185	COG1605	Chorismate mutase
AYM92_RS07205	COG2226	methyltransferase
AYM92_RS07220	COG4753	response regulator
AYM92_RS07220	COG2207	Transcriptional regulator
AYM92_RS07225	COG2972	Histidine kinase
AYM92_RS07235	COG1653	transport
AYM92_RS07240	COG0395	ABC-type sugar transport system, permease component
AYM92_RS07245	COG1175	transmembrane transport
AYM92_RS07250	COG1940	carbohydrate kinase activity
AYM92_RS07255	COG2723	6-phospho-beta-galactosidase activity
AYM92_RS07260	COG3525	Glycosyl hydrolase, family 20, catalytic domain
AYM92_RS07275	COG0383	alpha-mannosidase activity
AYM92_RS07380	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AYM92_RS07385	COG1739	Uncharacterized protein family UPF0029
AYM92_RS07395	COG1098	S1 RNA binding domain
AYM92_RS07405	COG2197	response regulator
AYM92_RS07410	COG4585	Histidine kinase
AYM92_RS07420	COG0515	serine threonine protein kinase
AYM92_RS07420	COG2815	serine threonine protein kinase
AYM92_RS07430	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AYM92_RS07430	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AYM92_RS07440	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AYM92_RS07460	COG0583	DNA-binding transcription factor activity
AYM92_RS07465	COG0183	Belongs to the thiolase family
AYM92_RS07470	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AYM92_RS07480	COG1028	Short-chain dehydrogenase reductase Sdr
AYM92_RS07485	COG2610	gluconate transmembrane transporter activity
AYM92_RS07500	COG0116	Belongs to the methyltransferase superfamily
AYM92_RS07525	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AYM92_RS07530	COG3579	cysteine-type endopeptidase activity
AYM92_RS07540	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AYM92_RS07545	COG1113	amino acid transport
AYM92_RS07550	COG0492	ferredoxin-NADP+ reductase activity
AYM92_RS07560	COG1126	abc transporter atp-binding protein
AYM92_RS07570	COG0513	Belongs to the DEAD box helicase family
AYM92_RS07580	COG0768	penicillin binding
AYM92_RS07615	COG1131	(ABC) transporter
AYM92_RS07640	COG0446	pyridine nucleotide-disulphide oxidoreductase
AYM92_RS07645	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AYM92_RS07685	COG1755	Isoprenylcysteine carboxyl methyltransferase
AYM92_RS07700	COG1283	sodium-dependent phosphate transmembrane transporter activity
AYM92_RS07720	COG0561	phosphatase activity
AYM92_RS07725	COG2860	membrane
AYM92_RS07785	COG2217	Heavy metal translocating P-type atpase
AYM92_RS07815	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AYM92_RS07820	COG0195	Participates in both transcription termination and antitermination
AYM92_RS07845	COG4473	ABC transporter
AYM92_RS07850	COG1131	(ABC) transporter
AYM92_RS07855	COG0537	adenosine 5'-monophosphoramidase activity
AYM92_RS07865	COG1316	TRANSCRIPTIONal
AYM92_RS07875	COG0802	atpase or kinase
AYM92_RS07880	COG2252	PERMEase
AYM92_RS07885	COG0561	phosphatase activity
AYM92_RS07895	COG3715	PTS system
AYM92_RS07900	COG3716	PTS system mannose fructose sorbose family IID component
AYM92_RS07925	COG0439	Biotin carboxylase
AYM92_RS07940	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AYM92_RS07945	COG1028	Short-chain dehydrogenase reductase Sdr
AYM92_RS07950	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AYM92_RS07975	COG1024	Enoyl-CoA hydratase
AYM92_RS07980	COG0484	heat shock protein binding
AYM92_RS08010	COG0588	phosphoglycerate mutase activity
AYM92_RS08015	COG2261	transglycosylase associated protein
AYM92_RS08050	COG1335	isochorismatase
AYM92_RS08060	COG0436	Aminotransferase
AYM92_RS08070	COG0561	phosphatase activity
AYM92_RS08075	COG0252	asparaginase activity
AYM92_RS08090	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AYM92_RS08100	COG1129	ABC transporter
AYM92_RS08115	COG1132	(ABC) transporter
AYM92_RS08120	COG4988	ABC transporter
AYM92_RS08125	COG1120	ATPase activity
AYM92_RS08150	COG1388	LysM domain
AYM92_RS08150	COG3942	CHAP domain
AYM92_RS08175	COG5433	transposase activity
AYM92_RS08180	COG1482	cell wall glycoprotein biosynthetic process
AYM92_RS08185	COG1940	carbohydrate kinase activity
AYM92_RS08195	COG1263	PTS System
AYM92_RS08195	COG2190	(PTS) system
AYM92_RS08195	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AYM92_RS08200	COG1621	beta-fructofuranosidase activity
AYM92_RS08205	COG1609	Transcriptional regulator
AYM92_RS08225	COG2131	deaminase
AYM92_RS08230	COG0006	proline dipeptidase activity
AYM92_RS08270	COG1194	a g-specific adenine glycosylase
AYM92_RS08280	COG3118	belongs to the thioredoxin family
AYM92_RS08310	COG0681	Belongs to the peptidase S26 family
AYM92_RS08315	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AYM92_RS08330	COG1882	Formate acetyltransferase
AYM92_RS08335	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AYM92_RS08350	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AYM92_RS08360	COG2814	Major facilitator Superfamily
AYM92_RS08365	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AYM92_RS08390	COG0789	Transcriptional regulator
AYM92_RS08425	COG2081	HI0933 family
AYM92_RS08435	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AYM92_RS08440	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AYM92_RS08460	COG0456	acetyltransferase
AYM92_RS08465	COG1214	PFAM Peptidase M22, glycoprotease
AYM92_RS08480	COG0174	glutamine synthetase
AYM92_RS08485	COG0789	Transcriptional regulator
AYM92_RS08500	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
AYM92_RS08555	COG0668	transmembrane transport
AYM92_RS08565	COG4720	Psort location CytoplasmicMembrane, score
AYM92_RS08570	COG0351	phosphomethylpyrimidine kinase
AYM92_RS08615	COG1929	Belongs to the glycerate kinase type-1 family
AYM92_RS08620	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AYM92_RS08650	COG0577	efflux transmembrane transporter activity
AYM92_RS08655	COG1136	(ABC) transporter
AYM92_RS08680	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AYM92_RS08680	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AYM92_RS08685	COG1447	Phosphotransferase system cellobiose-specific component IIA
AYM92_RS08745	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AYM92_RS08750	COG1476	TRANSCRIPTIONal
AYM92_RS08770	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AYM92_RS08780	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AYM92_RS08800	COG1045	serine acetyltransferase
AYM92_RS08815	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AYM92_RS08830	COG3711	transcriptional antiterminator
AYM92_RS08855	COG0431	NADPH-dependent FMN reductase
AYM92_RS08860	COG1846	Transcriptional regulator
AYM92_RS08880	COG4589	Belongs to the CDS family
AYM92_RS08890	COG1862	Preprotein translocase
AYM92_RS08900	COG1523	belongs to the glycosyl hydrolase 13 family
AYM92_RS08915	COG3842	ATPase activity
AYM92_RS08955	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AYM92_RS08955	COG2190	(PTS) system
AYM92_RS08955	COG1263	PTS System
AYM92_RS08960	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AYM92_RS08980	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AYM92_RS08985	COG0512	Glutamine amidotransferase of anthranilate synthase
AYM92_RS08990	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AYM92_RS09020	COG0601	transmembrane transport
AYM92_RS09025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AYM92_RS09030	COG1122	ATPase activity
AYM92_RS09050	COG0803	Belongs to the bacterial solute-binding protein 9 family
AYM92_RS09060	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AYM92_RS09060	COG1404	Belongs to the peptidase S8 family
AYM92_RS09080	COG3711	transcriptional antiterminator
AYM92_RS09095	COG3942	CHAP domain
AYM92_RS09095	COG1705	Flagellar rod assembly protein muramidase FlgJ
AYM92_RS09100	COG2205	protein histidine kinase activity
AYM92_RS09105	COG0745	RESPONSE REGULATOR receiver
AYM92_RS09110	COG0577	efflux transmembrane transporter activity
AYM92_RS09115	COG1136	(ABC) transporter
AYM92_RS09190	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AYM92_RS09205	COG1882	Formate acetyltransferase
AYM92_RS09210	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AYM92_RS09215	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AYM92_RS09220	COG1447	Phosphotransferase system cellobiose-specific component IIA
AYM92_RS09225	COG2390	Transcriptional regulator
AYM92_RS09230	COG1349	DNA-binding transcription factor activity
AYM92_RS09235	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AYM92_RS09255	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AYM92_RS09270	COG0564	pseudouridine synthase activity
AYM92_RS09305	COG0542	response to heat
AYM92_RS09310	COG4463	regulation of RNA biosynthetic process
AYM92_RS09325	COG0450	alkyl hydroperoxide reductase
AYM92_RS09340	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AYM92_RS09350	COG3404	Formiminotransferase-cyclodeaminase
AYM92_RS09365	COG0531	amino acid
AYM92_RS09395	COG3590	peptidase
AYM92_RS09400	COG0366	Alpha amylase catalytic
AYM92_RS09405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AYM92_RS09405	COG1263	PTS System
AYM92_RS09410	COG2188	Transcriptional regulator
AYM92_RS09420	COG1733	regulation of RNA biosynthetic process
AYM92_RS09425	COG2514	catechol 2,3-dioxygenase activity
AYM92_RS09435	COG0602	queuosine metabolic process
AYM92_RS09455	COG1328	CTP reductase activity
AYM92_RS09480	COG1393	Belongs to the ArsC family
AYM92_RS09495	COG0519	Catalyzes the synthesis of GMP from XMP
AYM92_RS09540	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AYM92_RS09545	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AYM92_RS09550	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AYM92_RS09635	COG1511	domain protein
AYM92_RS09655	COG0305	Participates in initiation and elongation during chromosome replication
AYM92_RS09685	COG1760	l-serine dehydratase
AYM92_RS09690	COG1760	l-serine dehydratase
AYM92_RS09695	COG0741	lytic transglycosylase activity
AYM92_RS09700	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AYM92_RS09715	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AYM92_RS09725	COG0612	Peptidase, M16
AYM92_RS09770	COG0517	IMP dehydrogenase activity
AYM92_RS09770	COG0516	GMP reductase activity
AYM92_RS09780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AYM92_RS09785	COG0488	(ABC) transporter
AYM92_RS09825	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AYM92_RS09830	COG1475	DNA binding