JHX97_RS00015    3056 ..    3068 +  -4.1   -3.6053   ACAATGACGAAAGTT                GTAGC ACA GTTAC                TTAGTTTCTCGGCAA  55 162
        ychF    4387 ..    4407 +  -7.6  -3.16106   AAAACAATATCAGAA            GGTTGGAA GAACA TTCCAGCC            CTTTTGGCATTTTAG  67 48
JHX97_RS00025 NONE
         mfd NONE
JHX97_RS00035 NONE
JHX97_RS00040 NONE
JHX97_RS00045 NONE
        tilS NONE
         hpt NONE
        ftsH   14563 ..   14587 + -11.6  -5.24129   GAATGATATAAAAAA          GCTGAACTTA TAGAT TAAGTTCAGC          TTTTTTATAAACACA 100 35
JHX97_RS00065   16385 ..   16413 + -11.8  -3.34013   TTTAAAATTACCCAA        CCCCTAGAGAAT TGATT AGTCTCTAGGGG        TTGATTGGCACAATG  90 140
JHX97_RS00070   18428 ..   18441 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JHX97_RS00075   18582 ..   18614 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JHX97_RS00080 NONE
         rrf NONE
JHX97_RS00090 NONE
JHX97_RS00095 NONE
JHX97_RS00100 NONE
JHX97_RS00105 NONE
JHX97_RS00110 NONE
JHX97_RS00115 NONE
JHX97_RS00120 NONE
JHX97_RS00125 NONE
JHX97_RS00130   22688 ..   22702 +  -4.2  -3.06261   GGGACCAAGGTGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATTAGAA  50 1
JHX97_RS00135   24429 ..   24442 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JHX97_RS00140   24583 ..   24615 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JHX97_RS00145 NONE
         rrf NONE
JHX97_RS00155 NONE
JHX97_RS00160 NONE
JHX97_RS00165 NONE
JHX97_RS00170 NONE
JHX97_RS00175 NONE
JHX97_RS00180 NONE
JHX97_RS00185 NONE
JHX97_RS00190 NONE
JHX97_RS00195   28689 ..   28703 +  -4.2  -3.06737   GGGACCAAGGTGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATTAATG  50 1
JHX97_RS00200 NONE
JHX97_RS00205 NONE
JHX97_RS00210 NONE
JHX97_RS00215   29081 ..   29094 +  -3.9   -2.8082   ATCCTGCTCCCGCAA               TACAT AAGT ATGTA                GTTGTTGGCTCGGTA  46 25
JHX97_RS00220 NONE
JHX97_RS00225   29288 ..   29306 +  -4.5  -2.70932   CTATATCAATAAAAG             CTTGGGC GCGTA GCTCAGG             TGGTTAGAGCGCACG  47 53
JHX97_RS00230   29342 ..   29363 +  -2.1  -2.50821   TAAGCGTGAGGTCGG           TGGTTCGAG TCCA CTCGTGCCC            ATATATATTTGGAGA  39 2
JHX97_RS00235   29516 ..   29528 +  -5.5  -5.70829   TATTAGGGGAAAGAA                GACGG TTA TCGTC                TTTTTTTGTAATCTT  86 80
JHX97_RS00240   32034 ..   32055 + -11.7  -5.00339   CTAACATATTATTTA           GGTTAGAAC AGTT GTTCTAACC            TTTTTGATTATTCCT 100 37
JHX97_RS00245   33248 ..   33270 +  -9.9  -4.75174   ATTAAGCTTAACGAA           GCCTGAGAT AATAG ATCTCGGGC           TTTTTGACTTGAATA 100 36
        recO   34477 ..   34494 +  -4.9  -5.82316   ATGCGTGAGTATGTC             TAAATCC ATGA GGGTTTA              TTTTTTTTAGATGAT 100 324
JHX97_RS00275 NONE
JHX97_RS00280 NONE
JHX97_RS00285 NONE
JHX97_RS00290 NONE
JHX97_RS00300 NONE
JHX97_RS00305 NONE
JHX97_RS00310 NONE
JHX97_RS00315 NONE
JHX97_RS00320   41560 ..   41582 +  -9.9  -3.33744   CGATATTTTATAGCA          GAGG-GCCTC TTTA GAGGCTCCTC           ATTTTTAAAGGAGAG  81 28
JHX97_RS00325 NONE
JHX97_RS00330   45943 ..   45955 +  -2.7  -3.13164   GGTTGAGTTGTGATT                TCAAA AAT TTTGG                TTACGTAGTTACGCA  43 57
JHX97_RS00335 NONE
JHX97_RS00340 NONE
JHX97_RS00345 NONE
JHX97_RS00350   48361 ..   48387 +  -4.4  -3.53012   GACTTGATGTGGATG         TGTTCTGGTGGA AAA TCCAGTCGAACA         TTTAAAGCGGAGAGG  55 79
JHX97_RS00355   48915 ..   48937 +  -6.3  -4.84274   TAGTATGAGTTTGAA           GGTAAGGCA GATAG TGTCTTGCC           TTTTTGCTATGCTTG  83 84
JHX97_RS00360 NONE
JHX97_RS00365 NONE
JHX97_RS00370 NONE
JHX97_RS00375 NONE
JHX97_RS00380 NONE
JHX97_RS00385   54154 ..   54169 +  -5.4  -5.24796   CAAATCTAAACCAAA              GTCGTA GCAA TACGGC               TTTTTATTGTGTCCA  82 71
JHX97_RS00390 NONE
JHX97_RS00395   55721 ..   55734 +  -4.5  -3.27298   AACAATCGAAGCTGC               TGCTG TACC CGGCA                TTGGTGGTTAAAGGC  51 1
JHX97_RS00400 NONE
JHX97_RS00405 NONE
JHX97_RS00410 NONE
JHX97_RS00415 NONE
JHX97_RS00420   57723 ..   57744 +  -2.1  -4.54727   CACTAAATAGCACAC           AGGGGTGGC AACT GATACCCCA            TTTTGATTTAAAAAG  59 31
JHX97_RS00425 NONE
JHX97_RS00430 NONE
JHX97_RS00435 NONE
JHX97_RS00440 NONE
JHX97_RS00445 NONE
JHX97_RS00450 NONE
JHX97_RS00455 NONE
JHX97_RS00460 NONE
JHX97_RS00465 NONE
JHX97_RS00470 NONE
JHX97_RS00475 NONE
JHX97_RS00480   71756 ..   71777 +  -9.4  -5.10064   TTAGATAAGACAAAA           CCGCTCTC TTAATC GAGGGCGG            TTTTTGTGTCTTAAA 100 91
JHX97_RS00485   72588 ..   72610 + -11.3  -5.76633   GAAATAAAAAACCAA           CCGCTCAGA TTATT TCTGGGCGG           TTTTTTTGTGTCTAA 100 86
JHX97_RS00495 NONE
        plsX NONE
JHX97_RS00505   75527 ..   75562 +   -18  -3.53091   CGTTTGACTTAGTTA    GAATAATAAAAAGAGC GTAA GCTCTTTTTATTATTC     TTTAAAAACGAACCT 100 29
JHX97_RS00515   80359 ..   80369 +    -4  -4.43012   TTGAAAATAGCTTGA                 TAGA TTT TCTA                 TTTTGATGTTGGCAT  62 156
JHX97_RS00520 NONE
JHX97_RS00525   83087 ..   83097 +    -4  -4.56597   GTTCGTTTTCCTATT                 TTTC TAC GAAA                 TTTTTCGGCAAGCCG  65 146
        purN   84081 ..   84107 +  -8.6  -3.01791   CCTCCATCCAAACAT         TCACGGTGGGCT TTT GGCCCGTCGCGA         TGTTGACAGCCACCT  71 418
        purD   88349 ..   88361 +  -4.9  -4.08767   GGACTTACCGCATAT                TTTTC TAC GAAAA                TTTTCGACAAATCGA  64 254
        purE NONE
        purK NONE
JHX97_RS00560 NONE
        purB   92693 ..   92708 +  -4.7  -5.63517   TTAATATAAAAAAAA              GAAGG TGATTC CCTTC               TTTTTTATTTAAAAA  86 37
JHX97_RS00570   93734 ..   93751 +  -4.9  -4.73432   TTTAAATAATAATTT             TATGACA TGGA TGTCATG              TTTATTTATATTTAC  72 36
JHX97_RS00575   93939 ..   93952 +  -3.9  -4.10161   TTTATGTTATAATAG               TTCTA TGGC TAGAA                TTTTAGACAATAATG  59 52
        ruvB NONE
JHX97_RS00585 NONE
JHX97_RS00590 NONE
JHX97_RS00595   97819 ..   97840 +  -2.9  -5.51402   GGTTTTTAAAAGAAA           GCGGTTTCG GAAA CAAAACGGC            TTTTTTTAGATATAT  76 132
        adhE  100687 ..  100718 + -12.6  -5.19275   GTTGATACCAGGAAA      TGATTTCTTATGAT TAAA GTCATAAGAAATCA       TTTTATTTTCTAAAT 100 49
        adhP  101993 ..  102037 +   -14  -4.30978   TGATTCCAAATAAAA TAGCACTCTCGAGTATCAGAAA ACA TTTTTG--ACTCGAGAGTGCTA TTTTGATACATTGAA 100 87
JHX97_RS00610  103660 ..  103670 +  -6.8   -2.9953   GGTATGAAAAAAGCA                 CCTC TAA GAGG                 TATACTTGTAGTTCA  59 77
        rpsJ  105298 ..  105308 +    -4  -5.49568   CAGAAGTTTTTGTGT                 TAGA TTT TCTA                 TTTTTATTTTGAGTT  79 129
        rplC NONE
        rplD NONE
JHX97_RS00635 NONE
        rplB  107904 ..  107914 +  -5.4  -4.15222   GAAATAGCGTTACAA                 TAGC TTT GCTA                 TTTATTCCGCCAACT  66 67
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
JHX97_RS00665 NONE
        rpsQ NONE
        rplN NONE
        rplX  110981 ..  110997 +  -5.1  -3.14132   CGTTACAGCAAAAAA              TCAGGCG AAG TGCTTGA              TTAATCACGAAGGAA  52 5
        rplE NONE
JHX97_RS00690  111777 ..  111813 + -10.4  -2.60194   TTGGTAAAAATATGA    CACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG    CTTAATTAAAACGGT  78 34
        rpsH NONE
        rplF  113119 ..  113133 +  -4.3  -2.62246   AGTTCAATCGACAAC               TTGTC AATGA GACAA               ATTGATTAAAATTAA  47 88
        rplR NONE
        rpsE NONE
        rpmD  114238 ..  114254 +  -8.1  -2.70932   AATAAGTTATAACTG              TGAAATC TCT GATTTCA              TAATTAAAAACGAGC  66 36
        rplO  114880 ..  114899 +  -5.1  -3.39784   TCAATCGAAGTCATC            TAATGAG GGGATA CTCATTA             TGTTCTTAAAAATAC  55 23
        secY  116210 ..  116226 + -10.9   -4.1922   GCAGAATAGAATACA              GGTTGAC ATT GTCAACC              TTCTATTTTGTTTTT 100 32
JHX97_RS00730  116995 ..  117026 + -10.4  -2.69202   GAACTCAAATAAATT      ATACTAATCTACTT GCAT AAGTAGATTAGTAA       TGATATACTAGTTTA  78 29
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK NONE
JHX97_RS00755 NONE
        rplQ  119761 ..  119811 + -12.9  -4.92791   ATTGTTAATATGTAA CGCTTGTTTATGAAAGGTATCTA AGCTA TAGAAACTTTTTATAAGCAGGCG TTTTGTTGTATTATG 100 148
JHX97_RS00765  121286 ..  121297 +    -3  -2.87944   AAAAAGAGTTGACAA                TCTT ATAC AAGA                 TATCGTATACTAATA  44 60
JHX97_RS00770  123135 ..  123148 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JHX97_RS00775  123289 ..  123321 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JHX97_RS00780 NONE
         rrf NONE
JHX97_RS00790  126694 ..  126717 +  -4.6  -3.04415   GGTCAGCGGTTCGAT          CCCGTTAA CTCCCATT TTAGCGGG           TGTAGTTTAGTGGTA  50 10
JHX97_RS00795  126785 ..  126804 +  -4.4  -3.15579   TCTCGTCACCCGCTT            TATAGTTT TCCC AAGCTATA             TTAATAAAAGCTTGG  51 23
JHX97_RS00800  126899 ..  126909 +  -2.6  -3.44586   CGTGCCCATTATCTA                 TAAT TAT ATTA                 TTATGGTCCGTTGGT  47 32
JHX97_RS00805 NONE
JHX97_RS00810 NONE
JHX97_RS00815  127169 ..  127182 +  -3.9   -2.8082   ATCCTGCTCCCGCAA               TACAT AAGT ATGTA                GTTGTTGGCTCGGTA  46 25
JHX97_RS00820  127262 ..  127272 +  -2.6  -3.63744   TTCCGTCTCGCGCCA                 TTAA AAT TTAA                 TATTTTACGGAAAGA  48 24
JHX97_RS00825  127337 ..  127353 +  -4.3  -3.42395   CGCTCCTTCGGGTTC              GGGGGTT CGA ATCCCTC              TCTTTCCATCCTAAA  53 1
JHX97_RS00830 NONE
JHX97_RS00835 NONE
JHX97_RS00840 NONE
JHX97_RS00845  127710 ..  127741 + -10.4  -4.43012   GGCCGCCGGTATACT      TGAAAAACAAGGTT TGTA AACCTTGTTTTTTG       TTTTGATCTTAGGCT 100 30
JHX97_RS00850  129080 ..  129090 +  -3.2  -2.91681   GTGGTTTTGGTTAAA                 CCAG ATT TTGG                 TATCTCGACTTGAAC  44 2
JHX97_RS00855  129427 ..  129440 +  -6.7  -3.44274   TATTTTGTTGGGATT               GCTTC TTTG GAAGC                TTCATGTTATAATTA  62 82
JHX97_RS00860 NONE
JHX97_RS00865 NONE
JHX97_RS00870  131464 ..  131488 + -12.3  -4.57482   TTTTAATAAGAAAAA          TCCTCACATGT TTA ATATGTGAGGA          TTTATTTATAAATGC 100 35
JHX97_RS00885  135674 ..  135710 +  -7.4  -4.15325   CAGTTAGGAAGAACA    GCAGTTAAATCACACT GATAA AGTCAGATTTAGCTGC    TCTTTTTGTGTCTAT  78 112
        rpoB  139429 ..  139439 +  -2.6  -4.03811   ATAAGCAATCAATTC                 TTAT TAA ATAA                 TTATTTACTGGTCTG  53 37
        rpoC  143160 ..  143175 +  -6.8  -5.38951   AATAATCTCATGAAA              GAGTCC TTAG GGGCTC               TTTTTTGTCTGAGTT  85 36
JHX97_RS00900  143696 ..  143722 +  -6.8  -5.95539   CAAAATAAGTTAAAA         GAAAATATCA CTTCTTC TGATATTTTC         TTTTTTTGTTTACGA  95 55
JHX97_RS00905 NONE
JHX97_RS00910 NONE
JHX97_RS00915 NONE
JHX97_RS00920 NONE
JHX97_RS00925 NONE
JHX97_RS00930 NONE
JHX97_RS00935  147371 ..  147385 +  -2.9  -3.43264   CCCAAACAATATAGT               CAATA AATAG TATTG               TTGTCATAAATCCTT  47 20
JHX97_RS00940  148420 ..  148431 +    -3  -5.58179   GGAAACTGAGTAATG                TCAA TTAA TTGA                 TTTTTTGTTATAATA  77 18
JHX97_RS00945  149708 ..  149732 +  -9.4  -5.28826   GTTTTCATAGATTAA          CCAAGTAAGG CAACA CTTTACTTGG          TTTTTTATGAGGTTT 100 51
JHX97_RS00950  150411 ..  150439 +  -2.4  -3.40775   GGACTTTGAGAACTG       GTCTTGAGATTGC TGGC GCTAGC-CAAGAC        TGTTTGAGTAACAAT  45 259
JHX97_RS00965 NONE
JHX97_RS00970 NONE
JHX97_RS00975  153901 ..  153920 +  -6.4  -5.66338   AATGACCAGAAAAAA            GGATTAGG ATCC CCTATTCC             TTTTTTCTTATGTTT  89 74
JHX97_RS00980  154524 ..  154555 +  -3.9  -3.21416   CCTTACGAGTATGAA      CAAAGTTTCAA GTGCTAGATG TTGGAACTTTG       TTCATCATAGGAATC  49 151
JHX97_RS01005 NONE
        lepB NONE
JHX97_RS01015 NONE
        srtB  163153 ..  163163 +  -2.6  -3.04248   ACGAAAGGAGGAGAC                 TTTT GAG AAAA                 TATTGGAAAATGTTA  43 40
JHX97_RS01025  163803 ..  163834 + -11.7  -4.58424   AATGAAACTTATTGA      CATCTCCATAGTC TTGCTT GACTTTGGAGATG       TTTTCTATGCTGATA 100 86
JHX97_RS01035  168188 ..  168210 +  -8.5  -4.85599   GACAATAGCGAAAAA          G-GGTCCACT TGTT AGTGGACCTC           TTTTTCTGGAATCGA  95 55
JHX97_RS01045  170866 ..  170890 +  -2.9  -5.79526   AATAACTACATGAAA         CGCCTG--GGA TTGTT TCCTTCAGGCG         TTTTTTTTAAGGTCT  86 43
JHX97_RS01055 NONE
JHX97_RS01060 NONE
JHX97_RS01065  174764 ..  174798 +  -8.8  -2.73338   ACGAGGGATCAATAA     TTTGACCTATAATATC TTG GATGTTAGAGGTTAAA     ATTTCAACAGCTTCT  65 335
JHX97_RS01075  175798 ..  175812 +  -3.6  -2.56914   GAAGCAGTTATAGTG               TCTTAT GTA ATGAGA               TAGATTGGTGGAATA  45 28
JHX97_RS01080  176887 ..  176897 +  -5.4  -3.37236   CTTTTAACACGATAG                 CAGT TAT ACTG                 TTATCACATTGGCTT  57 61
JHX97_RS01085 NONE
JHX97_RS01090 NONE
JHX97_RS01095  180090 ..  180109 +  -6.5  -2.74605   TCTTAAATAAAATTG            GATAAGG TATGGT CCTTATC             TAGATTTTAAAAAAC  57 21
JHX97_RS01100 NONE
JHX97_RS01105 NONE
JHX97_RS01110 NONE
JHX97_RS01115 NONE
JHX97_RS01120  185452 ..  185462 +    -4  -2.78712   ACGATGACAAAGGTT                 TTTG TTG CAAA                 TGATTGAGTTGACCA  46 8
JHX97_RS01125  186191 ..  186228 +  -5.6  -4.66609   TTAAGTAGTAAAAAA   GCAAGCCATCA-AAGGG ATTAA CCTAACTGATGGCTTGC   TTTTTAAGTAGCGTG  74 76
JHX97_RS01140  190162 ..  190184 +    -7   -4.7339   GTCTAGTATGACAAA           GAGTTGGATA GCG TTTCCAGCTC           TTTTTACCGTTTGTT  83 44
JHX97_RS01145  191528 ..  191557 + -10.1  -4.72986   AAACTGTACAATACC       GTCCAGAGTCG TCACGAAC CGACTTTGGAC        TTTTTAATAAAGGTG 100 40
        nusG  192237 ..  192267 + -14.2  -5.26875   CTATAGGCTCTCAAA       GGTCTGATGGTA TAAATAT TACCATCAGACC       TTTTTTAGTTGGCAG 100 35
         nga  194098 ..  194112 +    -5  -4.20817   CTTATATGGGAGATA               TTTCTG ATC CAGAAG               TTATTTTAGAGTATG  64 169
         slo  196270 ..  196300 + -13.5  -4.35091   CAAATACAGAAAAAA       GCTTGTCTATGAG ATACC TTCATAGACAAGC       TTTGTTATAACTGTT 100 112
JHX97_RS01185  199216 ..  199249 + -10.3  -5.83226   TTTTAAGTCTATTTG     TCCAGATTGGCTCTG TTTA CAGAGCAAGTCTGGC      TTTTTTTATTAGCTT 100 35
JHX97_RS01190  202014 ..  202037 +   -14  -4.83593   ACTCATCTAGAAAAA          CCACAAGAAC GAAG GTTCTTGTGG           TTTTTAATCGTTGTT 100 120
JHX97_RS01195  203677 ..  203687 +  -5.4  -4.07687   CTGCATCTTAAGAAA                 TAGC TCT GCTA                 TTTTAACAAAACAAT  63 43
JHX97_RS01200 NONE
JHX97_RS01205  204662 ..  204691 +  -2.2  -4.07568   TGGAAAGGATAAGAA       CTCTTAACCA GTTTGCACGG TGGCTAAGAG        TTTTAGGAAAAAGAG  52 71
JHX97_RS01210 NONE
JHX97_RS01215 NONE
JHX97_RS01220  207017 ..  207039 +  -9.9  -4.19258   TGTTAATCATTGTTT           GGGCAAGTC CTTTT GACTTGTCC           TTTTCGATGAACTGT  93 99
JHX97_RS01225  208891 ..  208919 +  -3.1  -3.10796   TCTAAAATTGAAAAA        CTCATTCATCGCG AGC TGCTATGAGTAAG        TGTTAAGTCGTCAAA  45 2
        ulaG  210599 ..  210612 +  -3.1   -4.8236   ATAATATAGTTATGT               TCTGT TTCG GCAGA                TTCTTTTTTTAAGTA  65 366
JHX97_RS01235 NONE
JHX97_RS01240  213715 ..  213734 +  -8.6  -4.74103   ATAGCAAATAGAGAA            GTCTAGGA ATTT TCCTAGGC             TTTTTAGGTTAACCA  93 55
        polA  216452 ..  216471 +  -3.6   -4.2092   GAGCTGGTACGAAGC            CAAATAAG TTTT CTTACTTG             TTATTTCTCATTTTG  59 19
JHX97_RS01250 NONE
        perR  217629 ..  217648 +  -7.2  -3.57144   TAACCCTTAAATAAA            GGCATTAT AAAT ATAGTGCC             TTTACAAATCAAAAA  68 44
         tgt  219954 ..  219991 + -12.1  -5.71712   TAAAAATGCTATGAT   CCTGGAACTGAGGGCGA TCTA TCGTCTTTGGTTTCAGG    TTTTTTTGTGTAGAC 100 42
JHX97_RS01270 NONE
JHX97_RS01275  221041 ..  221072 +   -16  -4.76041   TTAAGTTGTGTTGAA      CAGGTCTTGGCAGA TTTA TCTGCTAGGACCTG       TTTTTGGTGGGTCTC 100 57
JHX97_RS01280 NONE
JHX97_RS01285  222569 ..  222595 +  -5.1  -4.56775   ATAGAATATACAAAA         GGGCGTTTCCA AGTAC TAGAAGCGCTC         TTTTTCAGACCCAAT  69 193
         ffs  224809 ..  224832 +  -7.4  -4.75309   TCCAATGTTCAATAG          CAGCGACTTC TTTA GGGGTCGTTG           TTTTGTTACCTTTAG  83 248
        speG  226699 ..  226710 +  -7.2   -5.2112   TTATTAAGGTAAAGC                GGCC TCAG GGCC                 TTTTTTCATGATATT  89 246
JHX97_RS01310  228404 ..  228438 + -18.1  -3.32294   AAGTAAAAGCGATAA     TAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTA     TTATGCCAAATTTCA 100 146
JHX97_RS01320  231557 ..  231607 +   -26  -4.59027   AGGATGAAACGACTC AAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTTG TTTTCTCTAGTGCTT 100 84
JHX97_RS01335 NONE
JHX97_RS01340  235991 ..  236006 +  -3.2  -3.85088   AGGAAGGGAGGAGTA              GTGATG AAAA CAGCAC               GTTTTTTCTGGTTTT  52 25
JHX97_RS01345  237789 ..  237806 +  -8.4  -5.14563   AATAGATGGTATCAG             CTCCGC GTCTTA GCGGAG              TTTTTTGGTGAACAA  90 36
JHX97_RS01350  238678 ..  238700 +  -2.6  -5.31545   ATGGCATGATTAAAA           GTGGTCCGTT TAA AGTTGACCGC           TTTTTTGCTATTCTT  72 40
JHX97_RS01355  239248 ..  239274 +  -8.8  -3.31726   AAATGCTTATGACAG         CAGACCTATTCT TTA AGAGTGGGTTTG         TCTTGTCTAGGGGAG  73 54
        radA  240817 ..  240827 +  -3.2  -3.85817   AACTAACAGCAAAAA                 TAGC TCT GCTG                 TTTCTCAAAAGGAGT  52 181
JHX97_RS01365  241364 ..  241379 +    -9  -5.93252   AGTAGCCAAGTTGTA              GAGCTG AATT CAGCTC               TTTTTTATTTTTAAA 100 43
JHX97_RS01370  242204 ..  242221 +  -4.1  -5.44119   CAAAATAACATAAAA             TCAGCTT TTTA GGGCTGA              TTTTTTTCGCCTAAG  82 42
JHX97_RS01375  243877 ..  243900 +  -6.1  -5.39755   GTCACGACAACGAAA          GATTGAAGA TTAAGT TCTTCAGTC           TTTTTTATCGTTATC  86 88
JHX97_RS01380 NONE
JHX97_RS01385 NONE
JHX97_RS01390  247855 ..  247868 +  -9.5   -5.1675   AAATCAGTATTAAAG               CCCGG CTTG CCGGG                TTTTTTGATAGGTAA 100 301
        rnpA NONE
JHX97_RS01400 NONE
JHX97_RS01405  250211 ..  250239 +  -8.3  -5.36441   AGATCCTAAAAAGAA        TCTTTGGTAGTTA GTT TAGCTATCGAAGA        TTTTTTGTATGACCA  90 39
        rpmH  250672 ..  250694 +  -5.6  -5.15117   TACAACTAAAGTAAA           CCAAGAGT GCTCGAG GCTCTTGG           TTTTTTAACGTTTTC  79 51
JHX97_RS01415 NONE
JHX97_RS01420  253042 ..  253057 +  -7.6  -5.40072   TGTCAAATGGTCACT              GGAAAG GAGC CTTTCC               TTTTTTTAGGAGAGA  93 75
JHX97_RS01425 NONE
JHX97_RS01430 NONE
JHX97_RS01435 NONE
JHX97_RS01440 NONE
JHX97_RS01445  257614 ..  257660 +  -7.4  -3.93963   ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT  76 107
JHX97_RS01455 NONE
        rnmV NONE
        rsmA  261339 ..  261350 +  -4.4  -4.90266   CTACCTCAAAAATCA                TCAG TGAT CTGA                 TTTTTAGTTGATAAA  73 267
        rsgA NONE
JHX97_RS01475 NONE
JHX97_RS01480 NONE
JHX97_RS01485 NONE
JHX97_RS01490  265949 ..  265971 +  -9.3  -4.77216   TTTTGATGTGCTTAA           CACTTATGA TGGTT TCATAAGTG           TTTTTGGCTCTTGTT 100 83
        purR NONE
JHX97_RS01500  269661 ..  269691 +  -6.3   -5.1166   TCTATTTGACATGAA      GTACCGTCT-GTGT TATT ATATTAGACGGTAC       TTTTTACTTTTGGTC  84 77
        rpsL NONE
        rpsG  271130 ..  271150 +  -9.7  -4.75372   CAAATATTTAGATAA            CGGGTAGGT CCT GCCTATCCG            TTTTTGCTAAATAGT 100 434
        fusA  273295 ..  273321 +  -8.9  -5.21709   AATAACCACCACTAA        GAGGTTGAGGAT AACT ATCCT-AACCTC         TTTTTTAGTGTAACA  95 36
         gap  274791 ..  274817 +  -5.2  -5.72616   AACTGTATACAAAAA         GGCTAAGATG GAAGGGG TGTCTTAGCC         TTTTTTTGTCTGACT  86 181
JHX97_RS01540  279526 ..  279537 +  -3.6  -4.08216   GGTGGCGGAGGAGGC                GGCG GCGG TGCC                 TTTTAAAAAAGCTGC  57 8
JHX97_RS01545  280472 ..  280495 + -12.4  -4.83759   ATCGTTTAGGATGTT          GCGACAGACC TTGG GGACTGTCGC           TTTTTAAATTTCCTT 100 49
        mecA NONE
JHX97_RS01555  282589 ..  282605 +  -3.7  -3.94438   CCATTATAAAAAAAG              CAGTG CAAATGA CACTG              TCTTTTCTTGAGATG  57 83
        sufC  283442 ..  283465 +  -2.5  -2.84707   TTTGGAGACAATTAC          TTTAGCTTT CTACAA AAAGCTAGG           TGATGTTCTATATAC  42 44
        sufD NONE
JHX97_RS01570 NONE
JHX97_RS01575 NONE
        sufB  288022 ..  288061 + -13.9  -3.54158   AACACGTAAGATAAC  ATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAA   TTCATTATTGGCGTC 100 133
JHX97_RS01595  292952 ..  292995 + -15.6  -3.01924   GAAAAATAAAACGAT GTTCAAAAGAACTTTCTCGT TTAT GTGAGGGAGTTCTTTTGAAC TATTGAGGACAACTA 100 32
JHX97_RS01600 NONE
JHX97_RS01605 NONE
JHX97_RS01610 NONE
JHX97_RS01615  297502 ..  297512 +  -6.8  -4.83677   GTTTTGTATTGTAGA                 GGAC TAA GTCC                 TTTTAGTTTTATTTT  84 94
JHX97_RS01645  301058 ..  301071 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JHX97_RS01650  301212 ..  301244 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JHX97_RS01655 NONE
         rrf NONE
JHX97_RS01665  304628 ..  304645 +  -6.3  -5.61824   GGCGGAGTAGAAAGA             GGTAGGA AGCG TCCTATC              TTTTTTTGCATTTTA  89 33
JHX97_RS01670 NONE
JHX97_RS01675  305647 ..  305674 + -12.2  -5.04597   AATCATTTGTGATTA        TCTTATCAGGAG TTGA CTCTTGATAAGA         TTTTTGTATATCAGT 100 323
JHX97_RS01680 NONE
        yqeH  307535 ..  307545 +  -3.2  -3.92542   CGTCGCTGTCATTGT                 TCGT AAA GCGA                 TTATTTAAAAATAAA  55 7
        yhbY  307884 ..  307911 +  -3.4  -3.21276   TAAAGTTAAAGCAAT        CTAGTCCTTTTA TTTG TATAGGGGCTGG         TCTTATGAGACGAGG  47 22
JHX97_RS01695 NONE
        yqeK NONE
        rsfS  309569 ..  309587 +  -6.7  -4.60487   AATGTTACAAAGAGA             CCTTGTC AATAC GACAGGG             TTTTTGAGGATGATA  76 39
JHX97_RS01710  310424 ..  310434 +  -5.4    -3.224   AAAAGAGTTCATTAG                 GCAT TAA ATGC                 TATTATCAAAGCTTA  55 103
JHX97_RS01715  311698 ..  311718 +    -7  -5.41746   ATAAAAAATGAGAGG            CTCAATTA AACTC TAATTGAG            TTTTTTTGGGGGCTT  93 17
JHX97_RS01720  312926 ..  312947 +  -8.1  -4.68994   ATAGAATAATAAAAA           GAGTTGAAA ACTA TTTCAGCTC            TTTTTAAGTGATGCT  86 47
JHX97_RS01725  313962 ..  313985 +  -2.5  -4.91109   TAAACCATCTATTAA          CCAGTTATTC ATCTA GAA-GACTGG          TTTTTCTGATCGGAA  66 38
JHX97_RS01730  315303 ..  315318 +  -5.4  -2.83409   GTCATGATTATGCAG              GCGATG AAAA CATTGC               TATCGTAGATTACTG  52 206
JHX97_RS01735 NONE
JHX97_RS01740  317136 ..  317165 + -18.1  -3.98075   CATAAATAAACGAAA       CAACACCCTAAGT TTTT ACTTAGGGTGTTG        TTGTTTAGATGATGT 100 32
        sstT  320032 ..  320055 + -11.1  -6.01369   TAACATAATAAAAAA          CATCCTTGG AAAACG CCAAGGATG           TTTTTTTATTATTTA 100 48
JHX97_RS01770 NONE
        htpX  324569 ..  324600 +  -3.8  -5.51046   AAGGTTAAAAAACAT      GTGAGCGTTTGGG GTTTTTG CTCAAGC-CTCAC      TTTTTTATGTCTTTG  79 22
JHX97_RS01780  325537 ..  325554 +  -3.5  -3.58703   TGAAATAGTCTAGGA             TATGAGA TGGA TTTCATA              GTTTTCTTTCTGGGA  50 223
        covR NONE
        covS  327785 ..  327802 +  -2.7  -2.53213   TATTCCTTTGGCCCA             GTCTAAC GAGA GTTAGAG              TAGCTTAAGGCATTG  41 10
        nrdR NONE
JHX97_RS01800 NONE
        dnaI NONE
         der  331998 ..  332030 +  -8.5  -4.92783   TCTCATCATTGATAA      GGACTGTGTTGTGTA TGT TACAGGAGACAGTCC      TTTTTATAATACCTT  95 79
JHX97_RS01815 NONE
JHX97_RS01820 NONE
JHX97_RS01825  337467 ..  337481 + -11.4  -4.58466   TAACCAATAACATGT               CCTGCC TTA GGCAGG               TTTTCTCATTCTAAA 100 31
JHX97_RS01830  337995 ..  338009 +  -4.2  -3.68738   GAAACTTTAGAATCA               CAGCTG ATT CAACTG               TTGGTTTGTTAAAAA  55 31
        mltG  339669 ..  339715 + -23.5  -3.33696   TGTGAATAGTCAAAT TCAGTAAACACAAACATGGTGC TTAA GCACCATGTTTGTGTTT-CTGA TTCGTTCAAAAAAGA 100 19
        greA  340363 ..  340373 +  -5.4  -3.14255   GCCAAGAGGACTATA                 GATC AAA GATC                 GTTTTCGATGGTTAT  54 158
JHX97_RS01855  343124 ..  343136 +  -4.1   -2.6891   GAATCCTCATTTTCA                GCTTG ATT TAAGC                TAATATGATATAATA  47 15
JHX97_RS01860 NONE
JHX97_RS01865  344380 ..  344411 + -14.8  -3.02511   AAGAAATGATTAACA      TTAAAAAGTGAGTA TAAC TACTCACTTTTTAA       TGTTAACAGGATAAG  95 28
JHX97_RS01870  344919 ..  344942 + -11.1  -4.82667   GGGTTTAAAAAGAAA          CTCAGTTGG CTATTT CCAACTGAG           TTTTTCATATCGTCA 100 147
        racE NONE
JHX97_RS01880 NONE
JHX97_RS01885 NONE
JHX97_RS01890 NONE
        xerD NONE
JHX97_RS01900 NONE
JHX97_RS01905  349740 ..  349751 +    -3  -4.14013   AGCAAATGACGTTTA                CAAA AGGA TTTG                 TTTTAAGGCGTTTTA  57 60
JHX97_RS01910 NONE
        yidD  350872 ..  350886 +  -4.3  -3.38112   AAACAAGCATTCGTT               GGTTT AAATC AAACC               TGTTATGATTTAAGT  53 89
JHX97_RS01920  351540 ..  351597 + -22.5  -3.73402   ACTAAAATAATGGAC TTTTTAAAAGCGTCAGTTTTTGGCAAC ATGC GTTGTCAGTAGCTGACGCTTTTAAAAA TTTAGTCAAAGCTAT 100 31
JHX97_RS01925 NONE
JHX97_RS01930  353101 ..  353150 +  -8.9  -4.43879   GCTTATTTAAATCAT TTAGAATAACATTGGCAAGCA TCACCCCT TGATTGCCAGTGTTATTTTAG TTTTAGTTAGATGAT  89 62
JHX97_RS01935 NONE
JHX97_RS01940 NONE
JHX97_RS01945  356332 ..  356352 + -11.2   -4.7254   CAGATTATTGAGGAA            GACTAGGC TCCAT GCCTAGTC            TTTTTGATGAAAAGT 100 20
        pflA  357220 ..  357236 + -10.9  -4.67556   AAGAGCTGTTATAGG              GTTGAGG TTT CCTCAAC              TTTTTAAAGTATTAT 100 39
JHX97_RS01955  358291 ..  358315 + -10.8  -5.17054   AAAGACGCTTTAAAA          GGACTTGGTT TTTTT GACCAAGTCC          TTTTTTCACTCTTCT 100 44
JHX97_RS01960  359008 ..  359032 +  -9.4   -4.7329   GCACCATAGAAAAAA          GCTAGGAACA AGGAC TGTTCTTAGC          TTTTTGAGTGCTTTT 100 32
JHX97_RS01990  366257 ..  366283 +  -3.1  -5.52023   TAATGACACCAAGAA        CGGTTTCG-TGA GTGT TTATCGAAATCG         TTTTTTCTTAATGAT  77 43
         upp  367100 ..  367111 +  -4.4  -3.90744   TTGTTAAAAAAATCA                GAGA GATT TCTC                 TTCTTTAAAGGAAAA  59 90
JHX97_RS02000  367867 ..  367890 +  -6.8   -5.0916   AGGATCTCTGCAAAA          GTATTCTAGA AACT TCTAGGATGC           TTTTTCTCTTAGAAA  84 43
JHX97_RS02005  368792 ..  368814 +  -4.2   -4.7329   TGGTCCTAAAATAGA          GCACTG-CA AAGATA TGCCAGTGC           TTTTTAGCTCATTTT  70 198
JHX97_RS02010 NONE
JHX97_RS02015 NONE
JHX97_RS02020  370748 ..  370764 +    -3  -4.32046   GCTTAGGACCGTGTG             GCAG-AC CACT GTGCTGC              TTTCGTTTTTGGGAA  60 119
        yabA NONE
        rsmI  372239 ..  372257 +  -2.5  -2.52464   CTTTACCAACAATTT            C-ATGACT TATA AGTCATCG             TAGATTAGGAGAAAA  41 14
JHX97_RS02035  372993 ..  373013 +  -2.5  -3.79764   AGCAGGTAGTAATTG            CTCGATAGC GTC GGTATCCAG            TTGATTTTCTGTGGT  53 325
JHX97_RS02045  373981 ..  374038 + -11.7  -4.62471   TTTAGGATAATGCGA CAAAGTCTCAAAAAAGGACAAGGC AACATTATAAC GCCTTGTCCTTTTTTGGGA-TCTG TTTTTAGAAATTAGA 100 31
        lctO  376304 ..  376333 +  -5.1  -4.13767   TAGAACAGACAAAAA       CCTCTGCTATCATG TCA CAA-ATAGTAGAGG       TTTTACACTGCAAAA  64 38
        scpC  381625 ..  381663 + -20.6  -3.87505   AGAAACAGACATAAA   GACCATAAAAGCAAGCCA AAC TGGCTTGCTTTTATGGTG   TTATTGTCGTGTGCT 100 153
JHX97_RS02065  383006 ..  383025 + -10.8  -2.64134   AAGAAAGTTCATTTA            GGGTAAGT TTTT ACTTACCC             TCCGTTGATTTGCTG  81 55
        metG  385239 ..  385262 +  -6.8  -5.64006   CTATTATTCAAAAAA          CCTAAGCA AGAATATG TGCTTAGG           TTTTTTTGATTGCCT  89 48
        nrdF NONE
        nrdI NONE
        nrdE  389429 ..  389456 +   -10  -5.44119   CGCACGACCTTTCAA        GACAAGCAAG CATCAGCT CTTGCTTGTC         TTTTTTTGGCCTCAA 100 90
JHX97_RS02095  391379 ..  391399 + -13.3  -5.12707   CCCTTTAGTAGTCAG            GCCACCTCT GAT AGGGGTGGC            TTTTTTGGGGTTTAG 100 157
JHX97_RS02100  391724 ..  391758 + -17.4   -3.5393   TGCACGCAATCAGCA     GCACAAAAAGCACC CCTGACA GGTGCTTTTTGTGC     TTTAGCCAACCTCAT 100 55
JHX97_RS02110 NONE
JHX97_RS02115 NONE
JHX97_RS02120  394676 ..  394699 +  -8.1  -5.14965   TTGAAAGACGTGTTT          TCACGAGGG TGAATC CCCTCGTGC           TTTTTTGGTAAAAAT  90 88
JHX97_RS02125  396304 ..  396329 +  -2.7   -5.1861   CAAATGCCTAAGAAA         GACA-GACTT ATTGCTG AAGTCCTGTC         TTTTTTAGTCATCAC  69 46
        glmU NONE
JHX97_RS02135 NONE
JHX97_RS02140 NONE
JHX97_RS02145 NONE
JHX97_RS02150  399922 ..  399959 + -24.5  -4.56597   AGCCCCTCAAAAAAA   GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC    TTTTTGAGGAGACGC 100 65
JHX97_RS02160  401715 ..  401745 +  -6.2  -5.05113   AAAATAAGATAACAA       TAAAGCACAGCGAT TTT AGTGTTGTGCTTTG       TTTTATTTATGTAAA  83 34
JHX97_RS02165 NONE
JHX97_RS02170  403398 ..  403409 +  -2.2  -5.43414   AATAGTGGCAAATGA                CATC AAAG GGTG                 TTTTTTATATGTCAT  74 73
JHX97_RS02180  406929 ..  406961 + -20.1  -5.69473   GCAGACAAACTAAAA      GAACCTGACGTCTCA TGA TGAGATGTCAGGTTC      TTTTTTTGTGATGTC 100 28
        rplK NONE
        rplA  408864 ..  408888 +  -5.8  -5.42265   AGACAAATTTCTGAA          GACAAATCTT CACTA GAGGTTTGTC          TTTTTTATGGTTTAA  86 76
JHX97_RS02200 NONE
         frr NONE
JHX97_RS02210  411421 ..  411437 + -10.9  -5.46657   AATAGGATAAAAATG              CTTTGCC ACT GGCAAAG              TTTTTTGTTACAATG 100 31
        msrA NONE
JHX97_RS02220  412225 ..  412239 +  -5.7  -4.12198   TACGTGGATAAAAAA               GAGTC ATATC GACTC               TTTTGAAGGGTTATC  66 41
JHX97_RS02225  413542 ..  413559 +  -7.7  -5.06103   TGCTATCAAAAAAAA             CTCACGT TTAG GCGTGAG              TTTTTTGACAATTCT  88 45
JHX97_RS02230  415630 ..  415653 + -10.4    -5.243   CTTAGAGTAGTTAAA          GCTGATAAGT TTAG GCTTATCAGC           TTTTTTGATGATTTA 100 46
JHX97_RS02235 NONE
JHX97_RS02240  417462 ..  417476 +  -4.2  -2.68719   GATTTACCTAGCATT               CCCATT TTT AAGGGG               CTTGTGGTATAATGG  47 46
        ybeY NONE
JHX97_RS02250  418553 ..  418566 +  -2.4  -3.25942   GGACAAGACGGTTAA               GCTT AGTGAC AAGC                TTGATCTGAAGCCCT  44 93
         era NONE
JHX97_RS02260  420069 ..  420084 +    -9  -5.63103   GAAAGACGATGTTTC              GAGAGC TTAT GCTCTC               TTTTTTTGCTTCCAA  95 97
JHX97_RS02265 NONE
JHX97_RS02270  421749 ..  421771 +  -4.2  -3.89822   TTTGTCGCTTAATTT           CTTTATTGAG TGA TTCAATCAAG           TTTGTAGAGTAAATG  57 377
JHX97_RS02280 NONE
JHX97_RS02285  423209 ..  423244 +    -5   -3.3164   GTAGCTTTGGTAGCG    TCATTATTTGTTTTTA TCGA TAAAAGAAAATAGTGA     TTATGCCAATGAATT  54 202
JHX97_RS02290 NONE
JHX97_RS02295  423958 ..  423974 +  -2.3  -3.02471   GCGTATTGAAAATTG              GTTAAAA AAG TTATAAC              TGTCTCTGATAACAG  42 117
JHX97_RS02300  424594 ..  424628 +  -8.8  -5.46657   TCATCTTTGCCAAAG     CTCGTCATTTTATATG ATT TATATAGAATTACGAG     TTTTTTGTTAGACTA  95 173
JHX97_RS02305 NONE
JHX97_RS02310  426316 ..  426338 +  -3.4  -4.83615   AAGATAAATAAAGAA          GAGGTCAGG GAACTA CC-GGCCTC           TTTTTGTCCGAAATA  68 83
        rgg2  428796 ..  428806 +  -5.4    -4.005   GGGGGTGAGGACTGG                 TCTG AGG CAGA                 TTTATGAGTTGCTTT  63 8
        mutM NONE
JHX97_RS02340  430492 ..  430504 +  -3.5  -2.73875   TTAGCGCATCAAGGG                TTATA TGT TATAA                TAGTATTAAGAGCGA  43 115
JHX97_RS02345 NONE
JHX97_RS02350 NONE
        rpmG NONE
        secG  433839 ..  433865 +  -6.6  -5.60993   CAAGTAAATAAGGAG         TGAGCTTGAC AGAGTTA GTCTAGCTCA         TTTTTTTATCAGCGA  89 30
         rnr NONE
        smpB NONE
JHX97_RS02375  437521 ..  437541 +    -4  -5.81412   TTAGCACAAAAAAAA            CAGAGTTA GTTCA TATCTCTG            TTTTTTTTAAATAGG  90 90
        ccpA  444587 ..  444602 +    -9  -4.74453   TTTTCAATACTAAAA              TCAGCC CTAA GGCTGA               TTTTTGCATGTCTTA  93 89
JHX97_RS02420 NONE
JHX97_RS02425  447206 ..  447233 + -10.6  -6.09196   TAAGGTGGAACCACG        CTGATTGCGTCC TTTG GGATGCGGTCAG         TTTTTTTGTTTTGGA 100 243
        thrS  449367 ..  449384 +  -5.5  -5.47159   AATCAATGGCAAAAA             GAGGTCC TTAT GGGCTTC              TTTTTCTTTCTTAAA  84 39
JHX97_RS02435 NONE
JHX97_RS02440 NONE
JHX97_RS02445  452158 ..  452182 +  -8.6  -5.33785   TAGATAATGAAGGAA          GGCAGCTGTT GTAAA AATGGCTGCC          TTTTTTGTGATGGTT  95 90
        dhaK NONE
        dhaL NONE
JHX97_RS02470 NONE
JHX97_RS02475  456580 ..  456598 +  -9.6  -5.53991   AATGAACCAAAAAAA             GTTGGGTC TAG GACTCAAC             TTTTTTTGGTGGCTA 100 39
JHX97_RS02480 NONE
JHX97_RS02485 NONE
JHX97_RS02490 NONE
JHX97_RS02495  460771 ..  460804 +  -5.6  -3.48288   TTAGAAAAATATAGT     TTTGTGATTTTT TACTAACCAC AAAAATCACAAA      TTGTAATATCAATTA  57 115
JHX97_RS02500 NONE
        vicK NONE
JHX97_RS02510  463741 ..  463773 + -12.1  -5.27399   AGAGAATATGCAAAG      TAGCGCTGATTGGTG ATA TACCAGTCAGGGCTA      TTTTTTGATGTCTTA 100 55
JHX97_RS02515 NONE
         smc  468391 ..  468409 +  -9.6  -5.52909   TGACCAATTAAAAAA             CAGAAGGG AGT TCCTTCTG             TTTTTTTGGATGTTC 100 30
        shp3  469664 ..  469684 + -11.3   -3.3854   TAGGTGTACACCTAA            GTCTTTAGA TAC TCTAAAGAC            TTATAGGTAATGGTT  89 44
JHX97_RS02535 NONE
JHX97_RS02540 NONE
JHX97_RS02545 NONE
JHX97_RS02550 NONE
JHX97_RS02555 NONE
JHX97_RS02560 NONE
JHX97_RS02565  476491 ..  476501 +  -2.6  -4.84363   GTATGTAAGTAAATT                 TATT TAT AATA                 TTTTTGATACTTTGA  66 126
JHX97_RS02570  478248 ..  478261 +  -2.5  -3.95883   TGATTAACAAAAACA               TTTTT GCGA AAAAA                TATTTTTAAGTAATA  53 34
JHX97_RS02575  479582 ..  479623 +  -8.9  -6.02919   TTTTTCAAAGTAAAG GCACTAAGTTGATCTGA CTTACACA TCTTATCAACTTAGTGC  TTTTTTTATTTCTAG 100 75
JHX97_RS02605 NONE
JHX97_RS02610 NONE
JHX97_RS02615 NONE
JHX97_RS02620  483802 ..  483819 +  -7.7  -5.24129   AGAAATATACCGAAA             GCACTTC AAAG GAGGTGC              TTTTTTGTACCCCAA  89 82
JHX97_RS02625  484282 ..  484293 +  -2.2  -2.52464   AGCTGCTCTTGATTA                TCTG GCAA CGGA                 TGCCTTAGAAGCACG  39 6
JHX97_RS02630  485018 ..  485044 + -10.3  -4.98911   TAGTTTATCGCTTGT         TTTATCGCTTG AAGAA CGAGCGATAAA         TTTATTTTTATGGTA 100 368
JHX97_RS02635 NONE
JHX97_RS02640  486557 ..  486571 +  -2.8  -3.76968   ATATTTCAAAAGAAT               TAGGAT TGA ACCCTA               TTTCATCGCTAGATT  51 451
JHX97_RS02650 NONE
JHX97_RS02655 NONE
JHX97_RS02660 NONE
JHX97_RS02665  489841 ..  489873 +  -8.7  -4.44187   GTCTCTACTAAAAAA     TACTCCGTCTTCTA TGAAAC TAGAA-ACGGAGTA      TTTCTGTTTGTCTAT  89 155
JHX97_RS02675 NONE
JHX97_RS02680  493136 ..  493146 +  -2.6  -3.93708   TTAGAAGAGGAGAGT                 TAAT GGG ATTA                 TTTGATCGTTTATTT  53 23
        ftsY  494698 ..  494725 + -14.3  -4.85129   TTATAACAGCAAAAA        CCAGTCTCGTT CAATAA AACGAGACTGG         TTTTTAGTATGTCAT 100 35
JHX97_RS02695 NONE
JHX97_RS02700 NONE
JHX97_RS02705  500644 ..  500670 +  -8.9  -5.54885   GATAAAACTCAAAAA         GCATTTGTTTT GATAA AAAACAAGTGC         TTTTTTATTAGTCTT  95 83
JHX97_RS02725  505485 ..  505500 +  -5.4  -5.07652   ACTTATTGAAAAAAA              TCAGTC GTAA GACTGG               TTTTATTTTGCGAAA  79 439
JHX97_RS02735  505915 ..  505950 +  -8.4   -4.7629   TTGATATGTAAGTAA    GCGAAGGGTCTTATCA GCTA TGATGAGGCTTTTTGC     TTTTTGACTTAGTAA  86 110
JHX97_RS02740 NONE
JHX97_RS02745 NONE
JHX97_RS02750 NONE
JHX97_RS02755  508844 ..  508859 +  -3.3  -6.20267   AACTGAAGAAGGGGG              GATTG TGGCTT CAATC               TTTTTTTGTTTTTGG  95 116
JHX97_RS02765  510386 ..  510396 +  -5.4  -3.07895   TGACACCATTACACA                 GGTA ATC TACC                 TATCTTGAAAATAGA  54 90
JHX97_RS02770  511725 ..  511777 +  -7.3  -5.77853   TAACAAGAAATACTA GAGGCCCTCTTTTTCCAA--ATGGT ATACG ACCATAGTTGGGAAAAGAGAGCCTG TTTTTTTTGAAAGTT 100 41
JHX97_RS02775  512409 ..  512428 +  -9.4  -2.72661   ACTGTTAATAAACCA            GTCTTCAT GGTA ATGAAGAC             TGGTTAGAGATAATA  72 303
JHX97_RS02790  515370 ..  515382 +  -4.9   -3.5774   CAATAAGAACGTTTT                GATAA TGT TTATC                TTTAAACGATTGGAT  56 322
JHX97_RS02815 NONE
JHX97_RS02820  519602 ..  519633 + -17.6  -3.01791   ATAGTAACTATAATA      CAAAATAGACTTGG CACG CCAAGTCTATTTTG       TATTAACCAAGAAGT 100 37
         ppc  524930 ..  524940 +  -2.4  -4.79949   GAATTTTAAAGGTTA                 GCCC TTG GAGC                 TTCTTTTTTTGAGGA  62 91
JHX97_RS02840  526319 ..  526333 +  -8.6  -4.16943   AATAATATTCTAAAA               TCTCCT TTA AGGAGA               TTTTAGAATATAGAC  85 36
         tuf  527914 ..  527930 + -10.8  -4.87807   CTTAAGTTTGAAGAA              GCCCCC AATTC GGGGGC              TTTTTGCTATCTTAA 100 81
JHX97_RS02850  528857 ..  528902 + -20.2  -3.21062   GATTTCCTTAACTAA GTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGGC TTAACTCTTAATATG 100 26
JHX97_RS02875  534596 ..  534621 +    -7  -5.27335   AATCTTAAACAGCGA         GACTTGTTTA AGAAAA TAAACAGGTC          TTTTTATTTGAACAA  89 184
JHX97_RS02880  537361 ..  537384 + -10.4  -5.67967   TAATAGACGCTAAAA          GGTTTGAGAT AATT GTCTCAAACC           TTTTTTTATAATCGT 100 38
JHX97_RS02920 NONE
JHX97_RS02925 NONE
JHX97_RS02930 NONE
JHX97_RS02935  547756 ..  547771 +  -3.4  -2.85784   TGGCTTTAGTGCTAG              TAAAAA CGTT TTTTTA               TCATTCATTCAATTA  44 61
JHX97_RS02940  549001 ..  549018 +  -6.3  -2.91912   AGAAGGATCATAATA             CTGCTTT GACA AAGGCAG              TATCTGAGTCCATAA  58 359
        queG NONE
        prfB NONE
        ftsE NONE
JHX97_RS02960  553468 ..  553510 + -19.5  -2.74514   TCAAGAGAAGAAAAG CACCCCAAAAGTTAGATGT TTGAT GTATCTAACTTTTGGGGTG TCATTCAAAATTTAG 100 206
JHX97_RS02970  555244 ..  555266 +   -15  -5.61913   AATGATTAATACTGA           CACTGTGAGT GAA ACTCACAGTG           TTTTTTATATTTCTT 100 42
JHX97_RS02975  557823 ..  557863 +   -13  -4.74801   TAGTAGAAACGGACT  GTTTTCTGATATAATAGA AAGGA TCTATTATATCAGAAAAA  TTTTTAATGGCGTTA 100 12
JHX97_RS02980 NONE
        asnS  560735 ..  560769 + -12.5  -3.14931   ATTAGACCCTAATAA     TACAAAAAGTTCATG TCATC TATGAACTTTTTGTA     TTGGTAAGAAGTGAG  91 29
        rapZ NONE
JHX97_RS02995 NONE
        whiA  563928 ..  563951 + -10.4  -5.03994   TATAGAACATTTTTA          TCGTATGAGC CTTT GTTCATACGA           TTTTTCTGTCTAAAA 100 36
JHX97_RS03020  567638 ..  567648 +  -2.6  -4.70319   TACCTGTTAAATCGT                 TAAT TAT ATTA                 TTTTGCTTTTGGTAA  65 435
JHX97_RS03030 NONE
JHX97_RS03035  569176 ..  569186 +  -5.4  -3.16288   AGTCAATAGAATTGA                 CGTT AGA AACG                 TATTGATAAAGTTTC  55 183
JHX97_RS03045 NONE
JHX97_RS03050  570097 ..  570123 +  -3.8  -4.12198   TACAACTTAACGTTT         TACAAAGTTGTA TTT TACAAAGTTGTA         TTTTACAAAGTTGTA  59 370
JHX97_RS03055 NONE
JHX97_RS03060 NONE
JHX97_RS03065 NONE
JHX97_RS03070 NONE
JHX97_RS03075 NONE
JHX97_RS03080 NONE
JHX97_RS03085  572687 ..  572698 +  -4.4  -3.67976   GTAATTAAGAGGTTG                CTAG ATGA CTAG                 TTTAGACTTGCTCGG  55 14
JHX97_RS03090 NONE
JHX97_RS03095  573984 ..  573998 +  -4.2  -3.05935   TCTTTGAAACCCTTG               GCATTC GCG GGGTGC               TTGAATGAGCAATCT  50 3
JHX97_RS03100 NONE
JHX97_RS03105 NONE
JHX97_RS03110 NONE
JHX97_RS03115 NONE
JHX97_RS03120 NONE
JHX97_RS03125 NONE
JHX97_RS03130 NONE
JHX97_RS03135 NONE
JHX97_RS03140 NONE
JHX97_RS03145 NONE
JHX97_RS03150  579332 ..  579350 +  -6.7  -2.76833   AGTGTCCCAGAATGG             GCTAGGC AATAG GCTTAGC             ATTCATTTGCTATTT  57 517
JHX97_RS03155  580342 ..  580358 +  -7.3  -6.17268   AACTGTTTATGGCAG              TCATCAC ATA GTGGTGA              TTTTTTTTGTTATGG 100 15
JHX97_RS03170  581688 ..  581705 +  -2.8  -3.02511   AAACGGGTGTAAAAA             TTAACA ACAGTA TGTTAA              TATTCGGAAACTACC  43 46
JHX97_RS03175 NONE
JHX97_RS03180 NONE
JHX97_RS03185 NONE
JHX97_RS03190 NONE
JHX97_RS03195 NONE
JHX97_RS03200 NONE
JHX97_RS03205  586569 ..  586581 +  -5.5   -5.7946   GAAGAAATTTTACAA                GGGCT ATA AGCTC                TTTTTTTATTGGAGG  91 17
JHX97_RS03210 NONE
JHX97_RS03215 NONE
JHX97_RS03220 NONE
JHX97_RS03225 NONE
JHX97_RS03230 NONE
JHX97_RS03235  590008 ..  590028 +  -8.3  -5.26119   TTATGTAATTTTTAA            GGTCGCA TTTAAGC TGCGACC            TTTTATTTTTGACAA  90 33
JHX97_RS03240  590423 ..  590437 +  -2.8  -3.42366   CTTGTGGATACAGAG               CCTTTT GAA AAACGG               TTATACCATTTTAGA  47 69
JHX97_RS03245 NONE
JHX97_RS03250 NONE
JHX97_RS03255 NONE
JHX97_RS03260 NONE
JHX97_RS03265 NONE
JHX97_RS03270 NONE
JHX97_RS03275 NONE
JHX97_RS03280 NONE
JHX97_RS03285  601851 ..  601861 +  -5.4   -3.6692   CCGTCATCATAGCAA                 TAGC GGT GCTA                 TATTTTCCACTGGCC  59 67
JHX97_RS03290  603138 ..  603158 + -11.8  -4.23988   TTAGATAAGACAAAT            GCCCTCGC TTTTT GCGGGGGC            TGTTTTTTGGTATCC 100 37
JHX97_RS03295 NONE
JHX97_RS03300  604653 ..  604674 +  -9.4   -5.5208   TAAATAAAAAGCCAA           CCGCTCTC TTGATT GAGGGCGG            TTTTTTGTGTTATAA 100 34
JHX97_RS03315  606650 ..  606662 +  -4.8  -2.57132   AGAAGTCGGGGAATA                GTCG AGGAA CGAC                ATTGTAAAGCCACAA  49 55
        rlmD  608286 ..  608302 +  -2.3  -3.27298   TTATTGATAACTCTA              TGTTTAT TTT AGAAACA              TTCATGGTTAAAAAA  44 145
        rocA  610225 ..  610250 + -11.9  -4.74453   TCAAAATCAACTTAA         GAGTCTGAGAC AATA GTCCCAGACTC          TTTTTGAATATGTTA 100 63
JHX97_RS03340  615479 ..  615492 +  -4.5  -3.06796   CTAAAAAAGATGTTA               CTAGC ATGA GCTGG                TTAGCTCAGGTAAAG  50 37
JHX97_RS03345 NONE
JHX97_RS03350  618734 ..  618774 +  -9.7  -3.81557   TTACCAATGATTAAA  CAAGGGCCTTTTTCCTCAT GTT AAGAGGATCGAGGCTCTTG  TATTTCTTTGGAAAG  83 80
JHX97_RS03360 NONE
JHX97_RS03365  622283 ..  622298 +    -9  -3.34332   ATAGGACTTAAGGAA              CTGGTC ACAA GACCAG               ATTTTATCTAATCGT  75 37
JHX97_RS03370  623826 ..  623845 +  -7.8  -4.81212   TTGATTATAAGTTGA            GGGCTGGG AAAT CTCAGCTC             TTTTCTTCTGATGAG  83 54
JHX97_RS03375 NONE
JHX97_RS03380 NONE
JHX97_RS03385 NONE
JHX97_RS03390  631419 ..  631445 +  -5.8  -3.57561   AATAAAAAACAAATA         GGCGTCCTTTAT TAC GTGAAAGGCGCC         TTTACAAGGTTGAAA  62 102
JHX97_RS03395  632348 ..  632366 +    -3  -4.58685   TTAAACCTCTTTTAG             GTGATGAG TAA CTCAACCC             TTTTTAAAGAACTTT  62 15
JHX97_RS03400 NONE
JHX97_RS03405 NONE
JHX97_RS03410  634108 ..  634130 + -11.4  -4.74706   TATGGAAAAGCAAAA           GAGAAGGTGA CGC TCATCTTCTC           TTTTTACGTATTCAA 100 70
JHX97_RS03430 NONE
JHX97_RS03435  637744 ..  637770 + -13.8  -4.17906   GTAACACGAAATTCG         TCCCTGTCTAGG TTA TCTAGGCAGGGA         TTATTTGGTTTCATT 100 240
JHX97_RS03445 NONE
JHX97_RS03450  641370 ..  641405 + -10.5  -4.87807   CATTGCTTCCGCAGA    GTCCTGCCGC-TAGAC CATCA GTCTAAGCGACAGGGC    TTTTTGCTATATTCA 100 52
JHX97_RS03460  643736 ..  643750 +  -4.2  -3.07192   AGTGAAAGTGATTCT               CAAGCC TTT GACTTG               TGTATTCCACCCCTT  50 47
JHX97_RS03465  644804 ..  644830 +  -5.8  -4.69027   GATTTTCGTCATGAA         CCTGATCTCATT AAA AGAGAGGTCGGG         TTTTTACATGCCTTT  77 91
       ccdA2 NONE
JHX97_RS03475 NONE
        msrB  647501 ..  647516 +  -7.5  -3.87815   AAGACTAGTATGAGA              GGGCC ATGCAA GGCCC               TTTATAAAGATAAGG  73 73
JHX97_RS03485 NONE
JHX97_RS03490  650040 ..  650052 +  -7.7  -3.04144   GCATGTCAGCCATTT                CCCTA AGT TAGGG                TATTGGAGATAAGAA  66 54
JHX97_RS03495 NONE
JHX97_RS03500  651945 ..  651988 + -10.5  -4.75404   AAGGTTAACAAAAAA GCGAGTAAACGAATGTCCTG TCATT TAGGTT-TTCGTTTACTCGC TTTTTGATGAGATTT 100 68
JHX97_RS03510  653413 ..  653426 +  -2.5  -4.62336   TCTGACTTATTTTAA               TTTAT AAGT ATAAA                TTTTTACACTAAGAT  60 75
        arcA NONE
JHX97_RS03520 NONE
        argF  656547 ..  656593 + -11.1  -4.83169   ACTTTAACTACATGA CAAGTCGTTCTGGTTCTCGTGTC CTT GAC-CG-GAACTAGAACGGCTTA TTTTTATGAAAAGGT 100 119
JHX97_RS03530  658128 ..  658138 +  -5.4   -2.6927   TTAACAGATAGGAGG                 TTCC TAT GGAA                 TCCTATATCACACCT  51 37
JHX97_RS03535 NONE
        arcC  660566 ..  660599 + -14.9  -4.37711   ACAATAGTAGTATTA     GAAAAGGCTAATTTT ATTG AGAATTAGCCTTTTC      TTTTAGCTTTGATAG 100 157
JHX97_RS03545 NONE
        rsmD NONE
        coaD NONE
JHX97_RS03560  663963 ..  664011 +  -4.5  -5.08824   TAACTCATAAAAAAA CGGTTGAACCAGATAGACAGATC CTT GACCAGTCTTTTGGGTTCAATCA TTTTTTACATAAAAC  76 82
JHX97_RS03565  665424 ..  665441 +  -2.7   -4.7373   TCTTATGCAACTCTT             AACCTTA AGCT TAAGGTC              TTTTTGATAACATAG  63 154
JHX97_RS03570 NONE
        rlmN  667493 ..  667514 +  -8.8  -5.37043   TGATGACAAAATATT           CCTAGTCA CTAAAA TGACTAGG            TTTTTTATCTGGCCT  95 72
JHX97_RS03585  668932 ..  668955 +  -6.1  -5.26316   TGCCTTAGGATAAAA          GAAGTCAAT GATAAA ATTGGCTTC           TTTTTTATGGAATCA  84 48
JHX97_RS03590 NONE
JHX97_RS03595 NONE
JHX97_RS03600  670700 ..  670730 +  -5.5  -3.76534   AATTCCTTTTTTTGC       TGTATCCAGACTT GCTGA AAGTCTGAAAACA       TTTACAATTTATTAA  61 96
        typA  672685 ..  672727 +  -8.1  -3.38581   AACTAAATAAAATAG CAAAAAGATATTTAAGAAA AGTCA TTTTTTAAAGGTCTTTTTG TGTTTACAAGTTCCT  72 57
JHX97_RS03610  673069 ..  673098 +  -9.5  -3.77927   TTTTATACGATAAAA       GGACTGAT-TTGTT TTA GACAATATCAGTCC       TCTTTTAATAGTTCA  81 68
JHX97_RS03615 NONE
JHX97_RS03620 NONE
JHX97_RS03625  677083 ..  677104 + -10.3  -5.69473   TTATATAACAAAAAA           CGTAAAATG ATAA CATTTTACG            TTTTTTTATGGTATA 100 125
        ftsA  678535 ..  678550 +  -2.6  -3.91084   AGAACGTGTTCGTGG              CATATT TGGG AGTATG               TTTGATTAAAAGTAA  53 1
        ftsZ  679896 ..  679908 +  -4.1   -2.8372   TCCATTCTTTAAAAA                CCGTT AAT AATGG                ATTTACTGACAAATA  48 19
JHX97_RS03640 NONE
JHX97_RS03645 NONE
JHX97_RS03650 NONE
JHX97_RS03655 NONE
JHX97_RS03660  683113 ..  683123 +  -3.2  -3.10622   GCAAGCGGGAGATGA                 TGAG AGT CTCG                 TATTCCCTAAGTATT  45 76
JHX97_RS03665  686177 ..  686200 + -13.2  -5.14965   TGAGTAAGAAGACAA          CCATCGGGTC TTAG GACCTGATGG           TTTTTTAGTAGAGCT 100 66
JHX97_RS03685  690166 ..  690180 +  -7.8  -5.88565   GACATAGTAAAGAGA               CTTGCC TGA GGCAGG               TTTTTTTATTGTCAA 100 45
JHX97_RS03690 NONE
JHX97_RS03695  691708 ..  691750 +   -24  -3.73968   AATCTGTTCTATGAA TTATAAAAGGAAGTCCTAAA TGA TTTAGGACTTCCTTTTATAA TTTGCTAAGGCATTT 100 40
JHX97_RS03710 NONE
JHX97_RS03715  697304 ..  697323 +  -2.8  -5.98675   ACATAAGAGAATATA            AGAAGTCA GCAA TGGCTTCC             TTTTTTGTTTTTCTG  91 59
JHX97_RS03720 NONE
JHX97_RS03725 NONE
JHX97_RS03730 NONE
JHX97_RS03735 NONE
JHX97_RS03740 NONE
        recN  702775 ..  702801 +  -7.4  -4.09285   GGCTCGTGAACTACT         TGCCAAACATTA AGA TTATGTTTGGTA         TTTGATATTTTCATA  78 13
JHX97_RS03750  703925 ..  703966 +  -5.9  -4.64591   TGTAGTTGTAAAAGA CGGGGCAAATGTTCAAGCGT GAA AAGGTTG-ACTTTTGCCTCG TTTTGTATCTCGTTA  74 53
JHX97_RS03755 NONE
JHX97_RS03760 NONE
JHX97_RS03765  706406 ..  706419 +  -3.9  -3.04322   TAATCGCTTTTTTTA               GATAT GATA ATATC                TGTTAAAGCATTAAG  47 67
JHX97_RS03770  706753 ..  706789 +  -5.9  -5.47159   ATTGCATAGATAAAA   GCCCATTGTATCAAGC GTTACA GCCTG-TGCAGTGGGC    TTTTTTGTGTTCAGG  86 40
JHX97_RS03790  709802 ..  709814 +  -4.9  -2.78384   ATTTTAAACACTATA                TGATT TTA AATCA                TATAGTAGAAAGGAC  51 34
JHX97_RS03795 NONE
JHX97_RS03800  710926 ..  710939 +  -2.4  -3.81951   TTGCTAATACCTAAT               TTGC TAATGT GCAA                TTTGCTAATGTGCAA  50 390
JHX97_RS03805 NONE
JHX97_RS03810 NONE
JHX97_RS03815 NONE
JHX97_RS03820 NONE
JHX97_RS03825 NONE
JHX97_RS03830 NONE
JHX97_RS03835  713517 ..  713528 +  -4.4  -3.67976   GTAATTAAGAGGTTG                CTAG ATGA CTAG                 TTTAGACTTGCTCGG  55 14
JHX97_RS03840 NONE
JHX97_RS03845 NONE
JHX97_RS03850 NONE
JHX97_RS03855 NONE
JHX97_RS03860 NONE
JHX97_RS03865 NONE
JHX97_RS03870 NONE
JHX97_RS03875  718035 ..  718053 +    -3  -2.65409   ATACTAAACAAAAAA             AGCCAGCT CAC AGCTGACC             ATTGGTTAATAATTC  43 34
JHX97_RS03880 NONE
JHX97_RS03885  719116 ..  719132 +  -2.3  -2.89569   ATTTTGGAGGTTGAA              TTTCATT GAA AAAGAAA              TGCTTAATTTGCAAA  41 168
JHX97_RS03890 NONE
JHX97_RS03895 NONE
JHX97_RS03900 NONE
JHX97_RS03905  722459 ..  722479 +  -6.2  -4.77165   AACGCAATATATTAA           GCACCTAGA GCAA TCT-GGTGC            TTTTCTTATGCCCAA  77 26
JHX97_RS03910 NONE
JHX97_RS03915 NONE
JHX97_RS03920  723191 ..  723206 +  -5.4  -5.19328   TCAACTTAAACCAAA              GTCGTA GCAA TACGGC               TTTTTATTGTGCCCT  79 32
JHX97_RS03925  724687 ..  724702 +  -6.8   -5.1861   CAGCTGTTAAAAATT              GCATCC GAAA GGGTGC               TTTTTTAATGCTAAA  84 31
JHX97_RS03930 NONE
JHX97_RS03935 NONE
JHX97_RS03940  726331 ..  726342 +  -5.8  -2.71731   GAAACCTGAATTAGA                GGCA CTCT TGCC                 TGGTTAGGAGGTAAA  55 7
JHX97_RS03945 NONE
JHX97_RS03950 NONE
JHX97_RS03955 NONE
JHX97_RS03960  727626 ..  727637 +    -3  -3.61715   CTATCAAGCTGTATT                TGAT ATTA ATCA                 TTATTAAAGGAGATA  50 7
JHX97_RS03965 NONE
JHX97_RS03970 NONE
JHX97_RS03975 NONE
JHX97_RS03980 NONE
JHX97_RS03985 NONE
JHX97_RS03990 NONE
        hylP NONE
JHX97_RS04000 NONE
JHX97_RS04005 NONE
JHX97_RS04010 NONE
JHX97_RS04015 NONE
JHX97_RS04020 NONE
JHX97_RS04025  739641 ..  739662 + -10.8  -4.27297   TAAGATAAGACAAAT           GCCCTCGC TTTTTT GCGGGGGC            TGTTTTTGTTATTAA 100 55
JHX97_RS04030  740886 ..  740916 +  -8.2  -6.08342   AAATAGAATTTTTTA       GCAAGAATCGCCTG ACA CTAGCGACTCTTGC       TTTTTTTATTTGTTG 100 35
JHX97_RS04035  741269 ..  741290 +  -9.4   -5.8187   AAAATAATAAACCAA           CCGCTCTC TTGATT GAGGGCGG            TTTTTTTATTAGATG 100 34
JHX97_RS04040  742284 ..  742310 +  -6.7  -5.04385   ATCAATAATAAACAT         GCCAAATCT TTTCTCACT AGATTTGGC         TTTTTTACGAATATA  84 33
JHX97_RS04045  742723 ..  742764 + -11.1  -5.88197   ATAATTCGTCTAGAA AAATCTTGTTGCTATCGAT GTTT ATTGATAGCGACAAGGTTC  TTTTTTTATATTTGG 100 224
        cadA NONE
JHX97_RS04055  745167 ..  745200 + -14.1   -5.1615   TTCCCATTTTAAAAA     GCTTGGAAA-GTGTAC AAA GTGCACATTTCCAAGC     TTTTTTGACTATTAA 100 29
JHX97_RS04065  747096 ..  747111 +    -9  -5.35354   TGAATAACTTAAAAA              CCAGAC TTTG GTCTGG               TTTTTTGGTTCTATA  95 34
JHX97_RS04070 NONE
JHX97_RS04075  748447 ..  748478 + -10.3  -5.01732   ATAGTTATATGATAA      TGACGAGCCCTTTC TTGTT GAAAGGGCTTG-CA      TTTTTTAGGGAAATT 100 54
JHX97_RS04080  749584 ..  749602 +  -6.8  -2.74782   GATTCATCAGGCGTA             CAAACTAT CTT ATGGTTTG             TGCTTAGAGATTTCT  57 288
        recR  750727 ..  750739 +  -3.3  -3.04715   ATGTTGGTGCCTTTA                CTCGC AAA GAGAG                GTTTTGAAAAGGCTA  45 46
JHX97_RS04090  751976 ..  751991 +  -4.8   -3.8637   AGGGAGTTTGACATT              TTAGAA ATTT TTCTAA               TGTTTTGTGCTATAA  59 148
JHX97_RS04095  753454 ..  753468 +  -2.8  -2.94076   CTTGATTTTTATAAA               ACTTTC AGA GAAAGG               CTTGTTCTCTCATGA  42 36
JHX97_RS04100  754255 ..  754282 +  -2.6  -5.40072   ATCAGCTATAATAAG        AAGAGTCTGGGA TGAT TTCCAGGCTCGA         TTTTTTTAAAAAAGA  76 62
JHX97_RS04105  756280 ..  756296 +  -5.1  -4.56597   TTAAAAGGTTTATAA              GGCAG CTTCGCA CTGCC              TTTTTAGAAAAGAGA  69 295
JHX97_RS04110  757939 ..  757972 +  -9.1  -4.37658   CAAAGGTGAATAAGC     TTAAAGAGAGTTGAT GAGA GTCAGCTCTTTTTAA      TTTTCTGAAAAAGTT  93 28
JHX97_RS04115  760069 ..  760093 +    -8  -5.70761   TGAAGCATAAAAAAA          TCATTGAGAT GATAA GTCTCAATGA          TTTTTCTTTTCTTTT  93 31
JHX97_RS04130 NONE
JHX97_RS04135 NONE
JHX97_RS04140 NONE
JHX97_RS04145 NONE
JHX97_RS04150  766899 ..  766919 +  -9.8  -5.13521   ATAAGAAAAGGGTTT            CCAATCTC AAAAA GAGATTGG            TTTTTTAAGTGCTTT 100 37
JHX97_RS04155 NONE
JHX97_RS04160 NONE
        nagB  771426 ..  771441 +  -3.3  -3.93868   AACCTCATTTAAGAA              GAAGT CTTGTA ACTTC               TATTTCTTTTGCAAG  55 43
JHX97_RS04185 NONE
JHX97_RS04190 NONE
        pepF  775305 ..  775359 + -21.9  -5.40873   GACAAAAAGAGTTTA GGATTGATAGAAATGGAGATTCACA GTTGG TGTGAATCTCCATTTCTATCGGTCA TTTTCTTTTTATATT 100 57
JHX97_RS04200  776873 ..  776888 +  -4.7   -6.0427   AATTTAAAAGTAAAC              CCTAG CAAAGC CTAGG               TTTTTTTTATATAAT  93 53
JHX97_RS04205  777634 ..  777644 +  -2.6  -2.60244   GTAACATTGATAAAT                 TTAT GTT ATAA                 TAAATTAGTTAAAGA  41 41
        prsA  778937 ..  778951 +  -4.2  -2.54181   GTACCGCGGTTTTCG               CCCTCT GTG AGATGG               ACTTGTTTTGTATTG  47 226
        alaS  781754 ..  781773 +  -6.5  -5.56264   TAAATCCATAAAAAA            CCAAGTT ATTTAG AACTTGG             TTTTTTATATTTGAA  87 38
JHX97_RS04220 NONE
JHX97_RS04225  783091 ..  783110 +  -2.2  -3.92542   CCTAAAAGGAGACTG            TTTATGAA AGGA TTCATTAA             TTATTTAAAAATAGC  52 41
JHX97_RS04230  783988 ..  784000 +  -7.7  -2.56164   TATATTTAAAAATCT                CAAGC TGA GCTTG                CTTAATAGTTGCGAA  63 224
JHX97_RS04260 NONE
        ptsP  792556 ..  792575 +  -8.6   -5.1675   GATTAAAGGGTTAAA            GAGTTGGT TTAA ACCAGCTC             TTTTTTGCTAGCTAA  95 35
JHX97_RS04270  794168 ..  794203 + -14.4  -5.69023   CAGTAATAAAAAAAA    TAAACAAAAAGTTAGG TTAA CTTAACTTTTTGTTTA     TTTTTTTAATGTTTT 100 35
JHX97_RS04275  795563 ..  795598 + -13.6  -4.73388   TAGAATTGATATACT    AAACAATCCAATTACT TTGA AGTAATTGGATTGTTG     TTTTTAGTAGCCCTT 100 61
         udk  797458 ..  797480 +  -7.1   -4.9645   ATAGTGGAAGTGGCT           GAGTAGATT ATTTA AATCTGCTC           TTTTATTGTTGTGCT  88 37
JHX97_RS04290  798266 ..  798277 +  -3.6  -3.03124   AAAATAGCCGAAGAA                GCCT TAAT GGGC                 TCTTCGACAATAGGG  45 502
JHX97_RS04300 NONE
        dnaX  800978 ..  801001 +  -6.7  -2.60947   AAACTGAAATACATA          AGGGTAAGG TTTTGC CCTTACCCA           CGTTTTATCTCGTTA  57 40
JHX97_RS04310  801377 ..  801401 +    -8  -5.38054   TATTTTCTATAAAGG          TCACTTGTTT ATTAA GAACAAGTGA          TTTTTCTTTGTAAAC  93 140
JHX97_RS04320  804828 ..  804847 +  -7.9  -5.44119   TGACTATCAAGAGAA            CCTCAAG AATAAC CTTGAGG             TTTTTTTGAAATAAA  93 93
JHX97_RS04325  806514 ..  806542 +  -3.2  -5.64873   AATTTTATTAAAAAA        GTAGAGTGAG TGAAAAAAT CTTACTCTGC        TTTTTTGTTATTAAA  82 46
JHX97_RS04330  807928 ..  807945 +  -9.9  -5.48063   TAATCGAAGACTAAA             GAGAAGC TAAC GCTTCTC              TTTTTTATATTACAT 100 27
JHX97_RS04335  809152 ..  809169 +  -6.3  -5.00846   TAGCAAATGAAACAA             GGGAATC GAAA GATTCTC              TTTTTCTGATATTTA  83 54
JHX97_RS04340 NONE
JHX97_RS04345 NONE
JHX97_RS04350 NONE
JHX97_RS04355  813060 ..  813087 +  -6.4    -5.252   AAAGATAATAAGTCG        TGGAGTGAGAAA CTAT TTTCTTGCTTCA         TTTTTTATGAGGATG  85 47
        aroA NONE
JHX97_RS04365  815020 ..  815030 +  -2.6  -2.78738   AGGAAATAATCTTGA                 TTAT TCT ATAA                 TGATTAAAATTTTGA  42 129
JHX97_RS04370  816589 ..  816612 +  -8.2  -5.02074   AAGATATGGTATAAT          GGAGAGTAAC TAAA GTTGCTCTTC           TTTTTTGAGCAATGG  90 39
        rlmD  818139 ..  818155 +  -5.9  -3.09349   ATGAAGGTCTAGCTA              TTTAGCT TCC AGCTAAG              TGTGTCTATGCTTTC  57 152
JHX97_RS04385  819240 ..  819264 + -11.5  -5.46129   CAATAAAGGAAAAAA          GTCCCAACTCT CTG AGAATTGGGAC          TTTTTTCCTTTATTG 100 50
JHX97_RS04395  822471 ..  822495 +  -7.9  -5.07971   TGAGATAAGCAAAAA          GGTAAGCACTT AGG GATTGCTTACC          TTTTTGGTTCTTTTC  88 98
JHX97_RS04405  823972 ..  823985 +  -2.4  -3.66556   TTTTCTCTATTATAA               GCTT GATTGA AAGC                TTCTGTTACCAACTT  49 268
JHX97_RS04430  827581 ..  827625 + -15.4  -4.62054   TTGGACAAATAATTA TTGAAAGGATTTAGTTCTGT ATTGG ACAGGACTAAATCCTTTTAG TTTTGCTTTGATTCG 100 328
JHX97_RS04440  829293 ..  829304 +  -3.6  -5.44119   ATTAATGTAAGGAAA                CGCT GAAA GGCG                 TTTTTTTAAAGTAAA  79 31
        obgE  830670 ..  830694 +  -2.1  -3.31428   TAAGGCAATCCATTA          CAATAGCAGTG TGA TAGTGCTCTTG          TGTGTTATCTTTAAG  44 38
JHX97_RS04450  830872 ..  830894 +  -9.2  -5.16472   TGAAAAATTGAAAAA           GGATGAGG CTTAGGC CCTCATCC           TTTTTTGACCTTTTT 100 13
JHX97_RS04460 NONE
JHX97_RS04465 NONE
JHX97_RS04470 NONE
JHX97_RS04475 NONE
JHX97_RS04480 NONE
JHX97_RS04485  837644 ..  837657 +  -3.8  -4.20354   AGATAATTGTGTTAG               GCAG ACACCG CTGC                TTTTAAGGTTACCTT  59 154
JHX97_RS04490 NONE
JHX97_RS04495  839320 ..  839349 + -10.1  -4.62085   ATAACAGTAACCAAA       AAAGGCAAGGAGA TAGG TTTCCTTGCCTTA        TTATTTTTTGGAAGT 100 109
        uvrB  844616 ..  844637 +  -6.7  -2.73903   TAAAAAGGCATAAAA           CTTAACTGT CTAA ATAGTTAAG            CTTTAAAAAAATTTT  57 159
JHX97_RS04515  844868 ..  844882 +  -2.2  -4.11484   CATGGTCAAAGTAAC               TTTATT TAT AATGAA               TTTTAGGAGATTGAC  54 5
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
JHX97_RS04540  850459 ..  850516 + -18.1  -4.88918   ACTTTTTTGATATTC AAAAAGCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGCTTTTG TTTTATTTACGCTGA 100 279
JHX97_RS04565  856878 ..  856900 +  -4.2  -5.40474   TTAAGAGCAAAAAAA           GTAGCATTTT TAA GGAATGTTAC           TTTTTTTAGGAAACT  82 37
        malQ NONE
        glgP  860826 ..  860856 + -12.8  -4.41895   CATGCTTAAACTAAA       TTATAAGACAGTAG TTT CTGCTGTCTTATGA       TTTTACTTCAGACTT 100 78
JHX97_RS04590  863028 ..  863051 +  -6.8  -5.40004   TGTTAATTTGATAAA          CCG-CTTCTAT TTG ATGGAAGACGG          TTTTTTAATTTACTA  87 48
JHX97_RS04610 NONE
        pfkA  869362 ..  869372 +    -4   -3.3164   TAGACTTTGCAGCTT                 TGAA CCG TTCA                 TTGTCACAATAAGTT  49 3
         pyk  870974 ..  870996 + -10.7  -5.21709   AACTATTTACCTAAA           GGTTAGAAG GCAAG CTTCTAACC           TTTTTTGATATCAAA 100 50
        lepB  871716 ..  871741 +  -9.1  -5.71983   TTCGGATTTGTAGAA         GTAGAGTAGTT GTCA GGCTACTCTAC          TTTTTTTATAATTAG 100 17
        glmS  873733 ..  873755 + -12.8  -5.61881   ATTATAATGGATAAG           GCAACCATCT GTT AGGTGGTTGC           TTTTTGTTTTTAGGA 100 44
JHX97_RS04635  874256 ..  874274 +  -8.9  -4.03995   TCTAATAATAATACG             CAACCAG CTGAT CTGGTTG             TATTTTTATAAAAAA  82 36
JHX97_RS04640 NONE
JHX97_RS04645 NONE
JHX97_RS04650  876488 ..  876499 +  -5.8  -5.95539   ATTAAATCTTAAAAA                GGAC ACTT GTCC                 TTTTTTTGTTTAACA  93 29
         cfa  877872 ..  877905 +  -8.3  -5.54264   GTATTCTTAAAAAAA     TCCCTATGATCTGTT TAAA AACAAATTGTAGGGA      TTTTTTTAACTATTT  93 270
        pcrA  883530 ..  883564 + -13.1  -5.59564   AAAATAAGAAAAAAA     TGAGCTTCCTACT ATATAAGTG AGTAGGAAGCTCA     TTTTTTTAGATTTCT 100 34
JHX97_RS04675 NONE
        amaP NONE
JHX97_RS04685 NONE
JHX97_RS04690 NONE
JHX97_RS04695 NONE
JHX97_RS04700  886314 ..  886333 + -12.2   -4.8543   AGTGGTGATAAGTTT            GAGCTGGT ATTT ACCAGCTC             TTTTTGTCACGGTTA 100 68
JHX97_RS04705  887076 ..  887096 +  -9.8  -5.85737   CGAAAAGGATTATAA            GTTTGAGG GCCCA CCTCAAAC            TTTTTTTGTTGCTGT 100 26
JHX97_RS04715 NONE
JHX97_RS04720  891282 ..  891297 +  -4.8  -2.96695   TTAATCATATTATGG              TAGTAT TTAA ATACTA               TAATTTAATAGAAAG  52 77
JHX97_RS04725 NONE
JHX97_RS04730  892916 ..  892938 +  -3.4  -5.23316   TTCTTATCTATGACA           GCTTGGGA CTTAACT TCCTGAGC           TTTTTTGCTATAATA  74 56
JHX97_RS04735  894327 ..  894341 +  -4.3  -2.51173   AGGACCAGTAAGCCT               GAAAG TGAGT CTTTC               CTTGCTAAAATTGGT  47 30
        truB NONE
JHX97_RS04745 NONE
JHX97_RS04750 NONE
JHX97_RS04755 NONE
JHX97_RS04760 NONE
JHX97_RS04765 NONE
JHX97_RS04770 NONE
        pstC NONE
        pstA NONE
        pstB NONE
        pstB NONE
        phoU  904385 ..  904404 +  -9.4  -3.26546   ATATATGTAGACAGA            GATGATAC TTAG GTATCATC             TGTTGATCTATTATA  77 169
JHX97_RS04800  906997 ..  907018 +  -5.1  -5.31275   AGACCATAAGCAAAA           GAGTTGGGG GACT TTCCAGCTC            TTTTTTGTAGTGAGC  80 39
JHX97_RS04805 NONE
JHX97_RS04810  909446 ..  909471 +  -6.8  -4.97405   TAGCCAAGTTTTGCA         GCAAGGCGTG CTTTAT CGCGGCTTGC          TTTGTTTTTGTGAAT  83 166
JHX97_RS04825  911504 ..  911552 + -15.7  -3.29471   ATTAAGAAGTATAAA GCAAGCCTAATTTAAATAATCAA CAA TTGCTCATTTAAATTAGGTTTGC TTAATATAGTAAAGA 100 16
JHX97_RS04830  912580 ..  912590 +  -4.6  -4.42594   AATTTCTGTTATCTA                 GCCG TCT TGGC                 TTTATATTTACTTTC  64 49
JHX97_RS04835  913719 ..  913740 +  -7.2  -4.62336   GTTTAAGAACAAGAA           GCGCGACC TTTGTC GGTCGCTC            TTTTTAAACTGAGAT  80 42
JHX97_RS04840 NONE
JHX97_RS04845 NONE
JHX97_RS04850  917540 ..  917562 + -11.4  -5.00412   AGAATAGACTAAAAA           GAACTAAGTC AGC GGCTTAGTTC           TTTTTGCTTGTCTTT 100 177
JHX97_RS04875 NONE
JHX97_RS04880 NONE
JHX97_RS04885 NONE
JHX97_RS04890 NONE
JHX97_RS04895 NONE
JHX97_RS04900 NONE
JHX97_RS04905 NONE
JHX97_RS04910  929498 ..  929532 +  -4.2  -4.19371   CCTCGGTCTCTTTTA     GGAAAAATTGCTCGAA TAA TTCGAGCAAGCGCTCC     TTTCTTCCCGCTTTA  62 25
         cls  931314 ..  931334 + -12.7  -5.81622   TTAAGAATGCCCCTT            GGATTGAGA TAT TCTCAATCC            TTTTTTTAATTTTAT 100 179
JHX97_RS04920  931887 ..  931914 + -14.4  -5.56568   GGGATAAGGTTTAAA        TACCTAACAGAT AAAA ATCTGTTAGGTA         TTTTTTTGCTACTAT 100 74
JHX97_RS04930 NONE
JHX97_RS04935  935165 ..  935178 +  -8.1  -5.14965   TGAAATAACTATAAA               GCCGT TTTG ACGGC                TTTTTTGATGACAGT  90 117
JHX97_RS04940  936878 ..  936891 +  -5.3  -5.74122   CACCAACCAAAAAAA               GATGT GACT ACATC                TTTTTTTATCTAATG  86 152
JHX97_RS04945  938347 ..  938398 + -15.6  -3.42069   ACGAAAACAGTTAAA GAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTC TGTTATTCCCATTCA 100 13
JHX97_RS04955 NONE
JHX97_RS04960  942349 ..  942366 +  -8.5  -3.60048   AAAATAATTAGTAAA             GAAGTCA TTTA TGACTTC              CTTTTTTACACGAAC  77 30
JHX97_RS04965 NONE
         ffh  944354 ..  944373 + -10.8  -4.80882   AAAACGAAAATAAAA            GAGACGAA AATT TTCGTCTC             TTTTTGATGTGAAAT 100 28
        xerS  947091 ..  947102 +  -4.4   -3.6215   ATATTAGAGAATCAT                GAAG ACAG CTTC                 TTTAACATCAATTGG  55 406
JHX97_RS04985 NONE
        citC  949041 ..  949067 + -12.5  -4.93316   TACTAAGATAAAAAA         CCTATCTGATT ATCAA AATCAGATAGG         TTTTTGGTATTGTTC 100 35
JHX97_RS05035  957580 ..  957613 +  -5.4  -4.58663   TTCCTTATGAGATGA     TTAAAGTCATGTCC TTTTGT GAGCATGGCTTTAA      TTTTTCAGAACTCAT  71 65
JHX97_RS05040 NONE
        citG  959636 ..  959648 +  -4.1  -3.37761   TGAAACACCTGCTGC                TCCTA TCA TAGGG                TTCACTTTGTTACCA  50 391
JHX97_RS05095 NONE
JHX97_RS05100  970475 ..  970491 +  -5.9  -3.63991   GCTTAATGTGATGAG              TTGGTGT AAG ACATCAA              TTCTTAGAAGTGGTA  62 70
JHX97_RS05130  977430 ..  977443 +  -6.7  -5.48213   AAACTAATCACAAAA               GAGAC TTCG GTCTC                TTTTTGTTTTGCCTG  87 34
JHX97_RS05190  989375 ..  989394 + -13.6  -3.27475   AATCATAATGACCTT            CCCCCACT CCTT AGTGGGGG             TATTCTGCTAAAAAG  93 33
JHX97_RS05195  990399 ..  990413 +  -7.1  -5.37865   TGATCACAGAAAAAA               CGGCT CAATT AGCCG               TTTTTTAATTATTCA  89 66
JHX97_RS05225  997197 ..  997210 +  -3.9  -2.81281   ATCAGGCCCTTCCAT               TTTAG ATCA CTAAA                CTTGATTTTAAATAG  46 13
JHX97_RS05255 1002348 .. 1002369 +    -6  -5.09762   AATGGCTAAAAGCGA           CAGAAAAA CTGAAA TTTTTCTG            TTTTTCTGTTAAAAT  83 39
JHX97_RS05260 NONE
JHX97_RS05265 NONE
JHX97_RS05270 1005045 .. 1005062 +  -7.1   -5.1101   ATACTATTATATAGT             GCTAAAA CTAA TTTTAGC              TTTTTTAACTCATAC  88 155
JHX97_RS05275 NONE
JHX97_RS05280 1006643 .. 1006657 +  -2.8  -3.45027   TAAAGCAATAATCGT               TAGAAC TAG GTTCAA               TATTTCCTGAAGGAT  48 152
JHX97_RS05310 1013058 .. 1013104 + -19.3  -3.64371   AATGATATTAGCTAA TCACAAAATAAGTAGAAGC-TA GAAA TATGCTTCTACTTATTTTGTGA TTTAAAGTATAACTT 100 26
JHX97_RS05325 NONE
JHX97_RS05330 1018039 .. 1018057 +  -7.4  -4.60255   TCGATACATTAAAAA             GGCTGG AGAAATA CCAGCC             TTTTTGAGGGCTTAT  82 50
JHX97_RS05385 1027833 .. 1027864 + -13.3  -5.73672   ACTGTAAACTAAAAA      GACAGTTATGAAA AAATTC TTTCATAACTGTC       TTTTTTTGATTGTTT 100 73
JHX97_RS05405 NONE
        mnmE 1033128 .. 1033150 + -16.4  -4.82667   CTAATCATCACAAAA           GAGCTGGAAC ACT GTTCCAGCTC           TTTTTGCTGTCATAA 100 50
JHX97_RS05535 NONE
JHX97_RS05540 1060743 .. 1060775 +  -5.7  -4.76171   GTCATCAAACAAAAA     CTCCTAAGTAGGAC ACGATA GTTC-GCTTAGGAG      TTTTATAGTTTTTTC  74 54
       fbp54 1081217 .. 1081254 +  -7.7  -5.89921   TAAGCAACTAAAAAA   CAGCTCTCCTAGGAAAG TTAT TTCCCCTAGGAGAACTG    TTTTTTTATTCTGAT 100 41
JHX97_RS05710 1099091 .. 1099118 +  -3.3  -5.20216   TGGATCAATTTAAAA        GAGACTAGCAC ATTAAA GTGCCGGCCTC         TTTTTTAGTAATCTC  71 49
JHX97_RS05735 1102873 .. 1102888 +  -2.6  -5.43487   AAAGAAACAAAAAAA              GCCT-AT CAA ATAAGGC              TTTTTTATATGATTT  76 354
        plsY 1112404 .. 1112428 + -11.5  -5.80951   ATAAATTTACTAAAA          GCCTGACTTTC TCT GAAAGTCAAGC          TTTTTTGTTTTAACT 100 37
JHX97_RS05830 1121296 .. 1121331 +  -2.5  -5.17353   GTCATACTAAAAAAA    CACGGTAGTAAGACC TGTATC GGTCAAGTTATCGTG     TTTTTTGATAAATAT  69 55
JHX97_RS05865 1129244 .. 1129276 +  -3.3  -4.05085   CAAAACATGAAAAAA      TCCGTCTTGTGACTA CGT TATACACTTGACGGA      CTTTTTTTTAGCGCT  55 66
JHX97_RS05900 NONE
JHX97_RS05905 1136400 .. 1136430 + -17.1  -4.10269   CTAATATAAGGCAAT       CACCCATGTAAAC AATTG GTTTACATGGGTG       TTTAATCTTTGTTTC 100 51
JHX97_RS05945 1145608 .. 1145634 +  -4.4    -3.737   TGCTGGCATATTTGA         GCAGTTAAGCCT GTT AAGCTTAATCGC         TTTGGTCGCCAATTA  56 155
JHX97_RS05985 1154098 .. 1154130 + -19.5  -4.44046   AAAGTAAAACTAAAA      GGATTTAGTTCTGTA TTG TACAGAACTAAATCC      TTTATTTAAAATAGA 100 499
JHX97_RS06050 1165779 .. 1165833 + -28.4  -5.12707   ATTAAGAGCACCTAA TAAGCATACCCCTTTTTACAACATAG TCA CTATGCTGTAAAAAGGGGTATGCTTG TTTTTTAGCGTTTAA 100 89
JHX97_RS06165 NONE
JHX97_RS06170 1193938 .. 1193949 +  -4.4  -4.09015   CACAGTAGCAACGTT                TTGG TAGT CCAA                 TTTCTCGTCTGTTTT  61 455
JHX97_RS06200 1201016 .. 1201039 + -11.2  -5.45652   TTAATGATCTGACTA          GAAGCAAAAT AATA ATTTTGCTTC           TTTTTTATTGGCGAT 100 46
JHX97_RS06230 1204056 .. 1204077 +  -6.6  -5.32882   TCTTGCCCAACTAAA           GCTCTTAC CCTCGA GTAAGGGC            TTTTTTATCATGCTG  85 8
        mscL 1224410 .. 1224430 +  -6.9   -5.8096   GATAAAAAATAAAAA            CAGTTCTAA TTG TGAGAACTG            TTTTTATTTTTTATC 100 115
JHX97_RS06345 1233671 .. 1233695 +  -7.9  -5.58179   ACACTTAGAAAAAAA          CCAGACAAGTG CTG TGCTTGTTTGG          TTTTTTCTTCTAATA  93 68
JHX97_RS06510 1268545 .. 1268563 +  -8.9  -3.63627   AAAAGCTAATAAAAA             GTCGTGA GAATA TCACGAC             TTTCAAGTATCAAAA  77 129
JHX97_RS06555 NONE
JHX97_RS06560 1278556 .. 1278574 +   -11  -5.46706   AGACAATACAAAAAA             CCTTCCTG TAT CAGGAGGG             TTTTTCTTTTGGCCT 100 44
         mf2 1284989 .. 1285011 +  -4.3  -3.90112   CTTACTGCTATTTCA          TGTATT-CTC GTAC GAGTAATACA           TTTAATTAAGGAGAA  59 95
        speC 1285756 .. 1285777 + -10.1  -4.76963   ATCATACACAAAAAA           CCGCCCAGA ATAA TCTGAGCGG            TTTTGTCTTATCTCG 100 44
JHX97_RS06720 1311468 .. 1311494 +  -4.7  -3.40066   CGTTTAACAAGAAGC        CACA-TTTATAT AACA ATATAAAATGTG         TTAAGTTATTTTATT  55 340
        mobC NONE
JHX97_RS06785 1325515 .. 1325541 +  -8.1  -5.40072   AATTTATATGGGTAA         GGAGATGGAGA GATAA TCTTTATCTCC         TTTTTTTGAGCAACA  93 10
JHX97_RS07045 1371177 .. 1371202 +  -4.7   -4.9792   CGGTTTTTATCAGTT         CAGGGTCTATC TTAT GATAGGCTCTC          TTTTTCTCTCCGCTA  75 56
JHX97_RS07060 NONE
JHX97_RS07065 NONE
JHX97_RS07070 1374754 .. 1374768 +  -4.3  -2.57013   AATAAAACAAAATAC               CCAAA CATAT TTTGG               TACATTACCTTGAAA  47 231
        recX NONE
JHX97_RS07085 1377587 .. 1377614 + -12.8  -3.60925   TTCGTTGTGGTAAAA        GTGGCGTCAATG TTAG TGTTGACGCCAC         TTGGTATTTTTGAGC  95 178
JHX97_RS07165 1388509 .. 1388543 +  -5.2  -4.59376   CATCAACAAAAGTGA     TATGGCTTTATTATCA GAG TGATAGTAAATCTGTA     TTTTACTTTAATAAT  71 42
        cysK 1389566 .. 1389594 +  -8.2  -4.94672   AGACGAAATAAAAAA        GGGTTTGGAACT ACTAA GGTTCCAGACTC        TTTTTAGTGTTCTTT  90 30
JHX97_RS07245 NONE
JHX97_RS07250 1407299 .. 1407312 +  -5.9   -4.2123   CAACCTGTTAGTATT               GCTCC TGGA GGGGC                TTTCTTCGATAGCTC  69 279
JHX97_RS07260 1408535 .. 1408567 +    -5  -4.46212   ATAAATTTGGAGAGA     TAAAGAGGCTGTATC TTGT GAT-CTGTCTCTTTA      TTTTCTAATAAGGAG  69 37
JHX97_RS07265 NONE
JHX97_RS07270 1410588 .. 1410611 +  -8.2  -5.81622   TTATTAATCAAAAAA          CTGAGACAAG TTGC CTTATCTCAG           TTTTTTTGATTTTCT 100 132
        recU NONE
JHX97_RS07305 1417603 .. 1417629 + -10.8  -4.96848   TAATCTAAATAAAAA         GCGAGTCCACGT TCT GTGAGGACTCGC         TTTTTATATGACACA 100 120
JHX97_RS07485 1458894 .. 1458904 +  -6.8  -5.75342   ATTTCTTCTATCAAA                 GCAG AAA CTGC                 TTTTTTTTGACCACG 100 356
JHX97_RS07495 1460369 .. 1460425 + -16.4  -4.62069   GGCTGCTATGGGCTT GCCT--CTATTAACGTAAAAAGGTTCCT TTT GGGAACCTTTTTACGTTAATAGTTAGTC TTTTTGAGCTGCAAG 100 10
JHX97_RS07545 1468091 .. 1468101 +  -2.4  -4.37486   GCAAAAGTGATTTGC                 CCCC AGA GAGG                 TGTTTTTGTTTTGCT  57 95
JHX97_RS07565 1472288 .. 1472306 + -10.3  -5.97575   AATAATTCCTACCTG             CCACCAG TTAAT CTGGTGG             TTTTTTTTGTAGCTT 100 45
JHX97_RS07625 NONE
JHX97_RS07630 1482703 .. 1482728 +  -9.1  -5.47159   TTATTTGAAATCACA         GACAGCTATCA TCTT TGATACCTGTC          TTTTTTATATTCAAA 100 61
JHX97_RS07655 1487732 .. 1487755 +    -9  -4.06864   TAGTAGCAAACGAAA          CCACTATTTT TCAG AAAATGGTGG           TTCTTCTTCTGTCAA  82 38
        manX NONE
JHX97_RS07665 NONE
JHX97_RS07670 1490900 .. 1490924 + -10.8  -5.43621   TGTAATCAACCAATG          GAAGTCTGAG ATGAA CTCAGGCTTC          TTTTTTATGCTTTAT 100 36
JHX97_RS07675 1491643 .. 1491657 +  -2.8  -3.36564   GCCAAAGCGCTCCAG               CATCTT CAT AAGCTG               TGCTTTTTCTATCGT  47 306
        serS 1493040 .. 1493069 + -13.7  -4.07678   TAAATAATAAACTCA       CCCCAGAGATCAT TAAA GTGATTTCTGGGG        TTTACTATTTTAAAG 100 34
JHX97_RS07830 1520525 .. 1520540 +  -3.9  -3.64192   GCTAAGGCATCAACT              TGCCC AATCAG GGGCG               TTTCAACATGTTTTT  54 407
JHX97_RS07840 1522703 .. 1522744 + -16.2   -2.9587   ATAATCTAGCTTCCT GTAGAAATGTCCCACTAA AACATA TTAGTGGGACATTTCTAG  TACTTTAAGCTTTAA 100 37
JHX97_RS07950 NONE
JHX97_RS07955 1557323 .. 1557381 + -21.5  -3.15699   CAATCACTAATTACT CTAAAAGACAAACAAGCATACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTCTTTTAA TATTCGTACATAACT 100 53
JHX97_RS07990 1564687 .. 1564698 +  -2.2  -3.02745   CTGTGTCAAACGACT                GGCT CCAA AGTC                 TCATTTGTCACTAGC  42 83
JHX97_RS07995 1565430 .. 1565450 +  -6.9   -4.6038   ATAACAATCATTTCA            TCCTTGC TATCTAC GCAAGGA            TTTTCGTTTACTCTC  80 37
        mutY 1568551 .. 1568569 +  -5.3  -5.29846   AATGCTTAATCACAA             GTGAACT ATGAC GGTTCAC             TTTTTGTTTACAATT  82 32
JHX97_RS08025 1569321 .. 1569359 +   -17  -3.09933   TGAAGTTAGTAGATA   ATAAAATAAAGCTCAGCG TGA CGCTGGGCTTTATTTTAG   TTAACTCAATTCAGC 100 38
JHX97_RS08055 NONE
        lepB 1575273 .. 1575288 + -10.4  -4.35874   TTTAATTAGAAAAAA              CCTGCC TTTG GGCAGG               TTTTCAGTTATCTTG 100 32
JHX97_RS08065 NONE
JHX97_RS08070 1578368 .. 1578399 + -20.4  -5.24531   AAATAATGGACCAAA      GAAGCTGATTAGGG AAAT CCCTAATCAGCTTC       TTTTTTCTCCAAAAT 100 43
        pflB 1582106 .. 1582145 + -15.3   -5.1925   ATAACTTATAAAAAA  GAACAGCCATCTCATTT GATTCA AAATGAGATGGCTATTC   TTTTTTCACTTATAA 100 58
JHX97_RS08095 1585140 .. 1585167 +  -4.9  -4.98616   AAATAGATAAGATAA        CGTTTCTGG GAATCACTAA CCAGAGACG         TTTTTAATATTTTAC  75 31
JHX97_RS08110 NONE
JHX97_RS08115 1591125 .. 1591148 +  -6.8   -5.5604   AATTAACAAAGAAAA          GTGCTTAG CAATATAA CTAAGCAC           TTTTTTGTTAATTGG  87 35
JHX97_RS08125 1592107 .. 1592119 +  -3.5   -2.8499   TTTTATTGCCTCTTT                TTATA TGT TATAA                TAGTTAGTATTAAAT  44 172
JHX97_RS08130 1592464 .. 1592489 + -12.7  -5.66684   CTAAAAAAACAAAAA         CTAGCTTGAGA AGGA TCTCAGGCTAG          TTTTTTTATGAGTTA 100 37
JHX97_RS08150 1595945 .. 1595969 +  -9.4  -4.70266   TTCATAGCTAAAAAA          GCCTATTATC ACTAA GATAGTAGGC          TTTTTAACTCCTATT 100 34
JHX97_RS08170 1599764 .. 1599779 +  -4.7  -2.84265   ATTAATACCTGACTC              CCACA CTTAGA TGTGG               AGTTTTTTGATATTA  51 57
        rpsN 1600310 .. 1600337 + -14.3  -5.00616   TACTTATCATCATGA        CAACCCGGTAT GCCAAG ATACCGGGTTG         TTTTTTCAAAGGGAG 100 113
JHX97_RS08195 NONE
JHX97_RS08200 1604812 .. 1604850 +   -12  -4.57353   CAGATAATTATCAAA   CTAAAAACCAGTCC TCATAGAACAT GGACTGGTTTTTAG   TTTTCTATAATGGAA 100 103
JHX97_RS08280 1621398 .. 1621445 + -10.3  -3.71649   TATAATCTTAAAAAA TCCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGGG TTTAGGATTTACGGA  87 41
JHX97_RS08345 NONE
JHX97_RS08350 NONE
JHX97_RS08355 1637636 .. 1637664 +  -8.9  -4.90525   TAAAAGACAAAAAAA        CACCACAGTAG ATGATTA CTACTGTGGCG        TTTTATTTAAAATTG  95 38
JHX97_RS08425 1654138 .. 1654148 +  -3.2  -5.02074   TTTGAGAATTGTGAA                 GCTT TAC GAGC                 TTTTTTAAGACCTGG  68 418
JHX97_RS08430 NONE
JHX97_RS08435 1655018 .. 1655039 + -10.9  -5.18357   AATAACACGTTAAAA           GCCTTAGCA GTCT TGCTAGGGC            TTTTTTGGTAGATTA 100 36
JHX97_RS08440 NONE
JHX97_RS08445 1656536 .. 1656553 +  -4.2  -5.45652   TAAGTCAGCATGTGG             GATGTA TTCTTC TACATC              TTTTTTGTTAACAGT  82 421
JHX97_RS08550 1673529 .. 1673545 +  -6.7   -3.0558   AACCACTATCTGACT              TTTCTTT AAA AAAGAAA              TGATTTGTGATATAG  59 61
JHX97_RS08555 1674217 .. 1674228 +  -3.6  -5.85737   AGACTAACAAAAAAA                GGCT AAAG GGCC                 TTTTTTTGTTAGTCT  90 34
         ska 1695655 .. 1695684 +  -5.1  -5.26918   TAACTGACAAAAAAA       GCAAGCAAC ACGCTATCAACA GTTGCTTGC        TTTTTTCTAACCTCT  80 66
        nrdI 1700461 .. 1700506 + -18.6  -3.29273   GGTTACTGACATGAC TAAAGAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTCTTTG TGTTCTCCTAATCCC 100 291
JHX97_RS08675 1708550 .. 1708583 +  -3.7   -4.5265   CGTGGCCAAAAGACA     GTTGTTGCCTGTTCT CATT AGGCCTGGCAACCGC      TTTTATGATATAATT  65 156
        pabB NONE
JHX97_RS08685 NONE
JHX97_RS08690 1712285 .. 1712299 +  -7.2  -2.50479   TTTAAAAATCGCAAC               CGATTT CAA AAATCG               ATAATTTTGCTTGAA  60 49
        ssrS NONE
JHX97_RS08700 1712640 .. 1712653 +  -5.3  -3.99187   CTATACATGAAAAAA               CCTTT GTTT AAAGG                CTTTTTTTGCTTGTC  63 44
JHX97_RS08705 NONE
JHX97_RS08710 1713815 .. 1713830 +  -7.6   -5.4148   CTATTCAGACTGAAA              GCCTTT GTTT AAAGGC               TTTTTTGCTTGTTTC  93 79
JHX97_RS08715 NONE
JHX97_RS08720 NONE
JHX97_RS08725 NONE
JHX97_RS08730 NONE
JHX97_RS08735 NONE
JHX97_RS08740 1720456 .. 1720487 + -11.2  -4.47007   AACAAAATCACACCA      TTAAAAAA-CCAGCT TAC AGCTGGTTTTTTTAA      TTATTTTAATTTTTC 100 74
JHX97_RS08820 1741526 .. 1741561 + -18.5  -5.53991   CTATCACTGATACCA    TTCACGCTAAGCCTC ATTCTA GGGGCTTAGCGTGAA     TTTTTTTGCTGACTG 100 78
        ropB 1746455 .. 1746477 +  -6.3  -5.02715   GAGGCTCTTTAAAAA           GCTAACGCT CTTAT GGTGTTAGC           TTTTTGATTTGGTAT  84 39
JHX97_RS08855 1748377 .. 1748405 + -14.7  -5.48303   CAACAATAAGTAAAA        CAAGTCTAGGAAG TGA CTCCCTAGACTTG        TTTTTTTGAGGTTAT 100 32
JHX97_RS08900 1757908 .. 1757947 + -14.6  -3.31625   TGCCTTTACCTTTAT  GCTTTTTTAAAGCTCAAA CCAG TATGGGCTTTAAAAAAGC   TTACTAATTAGTTTA  95 129
JHX97_RS08925 1762745 .. 1762781 + -19.7  -4.34859   ACGCAGTCTTAAACG    CTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAG    TTTATCTGTTTTCAT 100 6
JHX97_RS08935 1766306 .. 1766326 + -14.1  -3.39327   GAAGTCAAAAAATAA            GGTCTCACA CTT TGTGAGACC            TTATCGGTATAGGAG 100 92
        ahpC NONE
        ahpF 1775986 .. 1776031 + -10.7  -5.02074   GTCAATAAAACAGCA TATTTAAAAGAAGTTTTGAGC TAAC GCTCAAAGCTTCTTTTTGAAA TTTTTTAAAGAATAC 100 33
JHX97_RS08990 1779644 .. 1779668 +  -2.1  -3.21199   CTAGATAAAAATGTA          AGCGTTATCTA TAA TAGGTAACCCA          TTCCCTTAATGAGTA  44 47
        ftcD NONE
JHX97_RS09000 NONE
JHX97_RS09005 NONE
JHX97_RS09010 1783567 .. 1783590 +  -3.9  -3.80733   TTAGTGGGATAAAGA          TAGGCATCA CACTAC TCATGCCTA           TTCTTCTCCAATGAA  55 37
JHX97_RS09015 NONE
        hutH 1786697 .. 1786722 +  -7.5  -3.61178   ACTTCTTTAACTAGA         GGGGCTGTGGC AGAG GTCATGGCCTC          TTTAGACTAACTAAC  71 51
JHX97_RS09025 1787872 .. 1787893 + -10.2  -4.48175   GCAACATAGATAAAA           CCCTCTGA TTCACT TCAGAGGG            TTTTCCTTAGCTTTT 100 54
        rpsB 1793152 .. 1793168 +  -7.3  -3.57144   GTTCCTAACTCTTAT              GGCAAAC TTC GTTTGTC              TTTAACAATCGAAAA  68 51
JHX97_RS09045 1794328 .. 1794353 +  -7.6  -5.24796   GATAAGTCTAAAAAA         GGCAACCTTC TTTCCT GAGGGTTGTC          TTTTTGTTGTGTCAA  89 53
        treR 1801225 .. 1801243 + -13.2  -3.96867   TAAAGACAGAAAAAA             GCCTTGCA AAA TGCAAGGC             TTGCTTTTCTTTTTC 100 38
JHX97_RS09075 1802780 .. 1802790 +  -5.4  -3.90744   CTAGCTATTTTACAA                 GAAG ATT CTTC                 TTCTTTCACGACAGA  63 47
        yaaA 1803616 .. 1803629 +  -8.1  -5.34055   GTCTATATCAAAAAA               GAGGC CTAG GCCTC                TTTTTTAGTCTTTAT  90 17
JHX97_RS09185 NONE
JHX97_RS09190 NONE
JHX97_RS09195 NONE
JHX97_RS09200 NONE
JHX97_RS09205 NONE
JHX97_RS09210 NONE
JHX97_RS09215 1827620 .. 1827633 +  -3.1   -3.6947   GACCCTTGATATATA               TAGCT TTAT AGCTG                TTATGTTGACCTTGT  50 143
JHX97_RS09220 NONE
JHX97_RS09225 NONE
JHX97_RS09230 1828735 .. 1828748 +  -8.1  -5.10601   TTAAATAAACAATCA               GAGGG TTTT CCCTC                TTTTTGTCGTTTTAT  90 33
JHX97_RS09235 1829303 .. 1829324 +  -2.9  -2.55545   AATATTCGGAAACTA           CCCCCTTCA TTTT TAAACGGGG            CTATATTGTTCGGAA  41 39
JHX97_RS09240 NONE
JHX97_RS09245 NONE
JHX97_RS09250 1831379 .. 1831392 +  -6.7   -5.4756   ACTCATTGTGTAAAG               GACCT GTAA AGGTC                TTTTTTGTTCACCTT  87 132
JHX97_RS09270 1836990 .. 1837019 + -11.6   -5.5208   TAAGTAATAACATTA       CTAAGGCTGTCA CATTTA TGACAGTCTTAG        TTTTTTATATTATAA 100 38
JHX97_RS09275 1837377 .. 1837396 +  -7.2  -5.40464   GGACCAAAATAAAAA            TACAGGTT GTTT GACCTGTA             TTTTTATTTATCATA  93 29
        rpmF NONE
        rpmG 1844230 .. 1844262 + -17.2  -4.36903   TTTGGATATTGAAGT      TAAGCCCTGTCATC ATTTG GATGGCAGGGCTTA      TTTATATTTGGTACA 100 175
JHX97_RS09315 NONE
        cadX NONE
JHX97_RS09325 1846340 .. 1846358 +  -5.3  -3.54459   CAACGTGGATTATTC             TTCCCTT GGAGA AAGGGGA             TTTCAGAACGCTTGG  59 61
JHX97_RS09335 1848000 .. 1848025 +  -6.9  -5.32699   ATTGAGATGAGAAAA         GCCTATGAAAT GAAC GTTTCAAAGGC          TTTTTTCGTGTTTAA  89 305
JHX97_RS09350 1849825 .. 1849852 + -11.4  -5.29846   ACTAGTGCTCTATCT        CCCCTTAGATTT TTCA ATATCTAAGGGG         TTTTTCTTTGCAATT 100 78
JHX97_RS09360 NONE
JHX97_RS09365 NONE
JHX97_RS09370 1852708 .. 1852737 +  -7.9  -6.10489   AAATAAGACAAAAAA       CAGCATCTAGTGT AACT GCCTTAGATGCTG        TTTTTTTTTGAGGTT 100 90
JHX97_RS09380 1855819 .. 1855833 +  -8.6  -4.94992   TGAGATACAAAAAAA               GCCTAT TAA ATAGGC               TTTTTGTAAGTTTAA  95 143
       sdaAB NONE
       sdaAA 1867844 .. 1867881 + -14.5  -4.17556   AGACAATTAAATACC   AAAAACCTATTGTTAGT AAAT ACTAACAATAGGTTTTA    TTTCTTCCAGCTATG 100 381
        hasA NONE
        hasB 1879615 .. 1879627 +  -4.8   -2.5955   CGTTCTGAAAACGAA                TGGC ACTAA GCCA                TAGATTATAAAAAGT  50 167
        hasC 1880803 .. 1880819 +  -2.3  -4.28049   ATGATACTTTATAGA              TAGCT CTTATTC AGCTA              TTATTATTTATTTCT  57 259
        yaaA NONE
        recF 1882413 .. 1882431 +  -9.6   -5.6473   ATAACATCAAAAAAG             GGTTCAGT TAA ACTGAGCC             TTTTTTTGATGTTAT 100 40
JHX97_RS09520 NONE
JHX97_RS09525 1889341 .. 1889364 +  -9.6  -4.18259   TATGATAAATGAGGT          GGCTAAGAAG ATCT CTTCCTAGCC           TCTTTTTTAAAATTT  93 46
JHX97_RS09530 1892029 .. 1892079 + -12.2  -2.78495   AATGAGTCAATATAC TAAAAGCATCTCAAGAGCTAGA TAAATAT TCTAATACTTGAGATGCTTTTA TCGATTTTACTAATA  84 75
JHX97_RS09550 1894002 .. 1894016 +  -6.4  -5.88197   ATCAAAGATAAAAAA               GCACTG TTT TAGTGC               TTTTTTTGTATTTAC  95 36
JHX97_RS09560 1896094 .. 1896122 + -17.7  -4.55093   TATTACATTTTATCA        CATAAAACAGTCC AAA GGACTGTTTTATG        TTTCTTATTCTATCC 100 58
JHX97_RS09565 1896902 .. 1896942 + -24.5  -6.04324   TGATGATGAATTAAA  CAGAATTATCAACAAGCTA CTT TAGCTTGTTGATAATTCTG  TTTTTTCTTTTTTAG   0 1
        rlmH 1894002 .. 1894016 -  -5.7   -5.5762   ATCAAAGATAAAAAA               GCACT GTTTT AGTGC               TTTTTTTGTATTTAC  84 156
JHX97_RS09540 1892562 .. 1892576 -    -5  -6.20267   GGAAAAAGAAAAAAA               TTGCCA AAA TGACAA               TCGCGATAGTCCGTA  95 29
JHX97_RS09535 1892445 .. 1892463 - -10.4  -5.99154   TACTAAATAAAAAAA             TCCTAAGA TTA TCTTAGGA             AATATCTTATCACTC 100 37
        trpS 1885199 .. 1885217 -  -3.2  -4.53777   TTTAATCAAAAATAA             GACTATAT AAA ACATAATC             TCTACTATCCTGTAA  62 117
        guaB 1883475 .. 1883497 -  -6.2  -5.80817   TTTAATATAAAAAAA           GAGCTGGCAC AAT ATGTCAGCCC           TTAAAGTTACTAAAT  93 48
JHX97_RS09505 1882399 .. 1882445 - -18.4  -3.20382   TCTGATATTCACTAA TAACATCAAAAAAGGGTTCAGT TAA ACTGAGCCTTTTTTTGATGTTA TGTGGCGATTAAGAT 100 34
JHX97_RS09470 NONE
JHX97_RS09465 NONE
JHX97_RS09460 NONE
        pgsA 1871352 .. 1871364 -  -2.7  -2.66272   TGTTATTTAAACGTA                TCCTT AAA AAGAA                AGCTTGCTCCTTTAA  41 0
JHX97_RS09450 NONE
JHX97_RS09445 NONE
JHX97_RS09440 1868803 .. 1868843 -  -9.2  -4.84642   CTCAAATGAAGAAAA  GTACCTCAATCATTAGAT GTTGT ATCTAACTTTTGAGGTAC  AATTCATTTCTTATA 100 69
JHX97_RS09435 1867849 .. 1867876 - -14.4    -4.946   ATTAAATACCAAAAA        CCTATTGTTAGT AAAT ACTAACAATAGG         TTTTATTTCTTCCAG 100 51
        mnmA 1864379 .. 1864389 -  -2.6  -4.60889   AACTATTTTTAAAAA                 TAAT GTG ATTA                 TATTTAAAATATACA  60 150
JHX97_RS09415 NONE
        mnmG 1861346 .. 1861362 -  -5.8  -5.34555   TTATACCATAAAAAA              GCCCTG AAATA CAGAGC              TTCCACTTGCTTTGA  84 61
JHX97_RS09405 NONE
        rplI NONE
        dnaB NONE
JHX97_RS09390 1857179 .. 1857191 -  -9.1  -5.28942   TATTGTAAAGAAAAA                GCCTC TAT GAGGC                AAAAATCAATCTAAA 100 31
        rpsD 1855819 .. 1855833 -  -8.6  -5.76633   TGAGATACAAAAAAA               GCCTAT TAA ATAGGC               TTTTTGTAAGTTTAA  95 49
JHX97_RS09375 1852665 .. 1852683 -  -7.5  -5.64304   CAAGACAATAAAAAA             CTTGACA GAAAT TGTCAAG             TTATTGTCAAAATAA  93 102
JHX97_RS09355 1849796 .. 1849807 -  -4.4  -4.82901   GGTTGTTGACAAAAA                GTTG ACGC CAAC                 AAACTAGTGCTCTAT  70 37
JHX97_RS09340 1848000 .. 1848025 -  -6.2  -4.51378   ATTGAGATGAGAAAA         GCCTATGAAA TGAACG TTTCAAAGGC          TTTTTTCGTGTTTAA  74 195
JHX97_RS09300 1842135 .. 1842172 - -11.5  -4.83243   CTTACAGAAAACAAA   CAGGTGCAACTCC-CTTC TAA AAAGAGAAGTTACACCTG   TTTTAGTGATTATCT 100 86
        aspS NONE
JHX97_RS09290 NONE
JHX97_RS09285 NONE
JHX97_RS09280 1837371 .. 1837402 - -11.9  -4.25283   AGTGGGGGACCAAAA      TAAAAATACAGGT TGTTTG ACCTGTATTTTTA       TTTATCATAATTTCT 100 23
        argR 1834321 .. 1834336 -  -3.2  -2.65409   TAATCATCAATTAAT              GGCTGA TGAC TGAGCC               TATCTTCTAGTTCTT  43 247
        mutS 1831621 .. 1831644 -  -7.5  -5.24796   TTGACAGAACAAAAA          GATGCCTTC AATATA GAAAGCATC           TTTTTCATTTTCAGC  89 48
JHX97_RS09180 NONE
JHX97_RS09175 NONE
JHX97_RS09170 1820546 .. 1820567 -  -5.9  -3.86015   GAGTTCTTTGACAAA           GTTAGCTTA CTAG TCAGCTAAC            AAAATACTTTACATT  65 153
        mutL NONE
JHX97_RS09155 NONE
        ruvA 1815412 .. 1815425 -  -5.3  -2.53641   GAACCCATGAGCAAC               GTTTC ATGT GAAAC                ACCTACCCTTTCATT  51 28
JHX97_RS09145 1814839 .. 1814865 -  -8.9  -5.15634   TATTTTATCAAAAAA         TCTTCCAATTC ACGAA GAATTAGAAGA         TTCTATTGAAAACAC  95 18
JHX97_RS09140 1813473 .. 1813488 -  -2.6  -3.23216   CGTCAGCAGGATTAA              TCTACA TAAT TGTAAA               CCATATCCTACTATA  45 55
        recA 1812276 .. 1812287 -  -7.2   -4.6644   AATACATTTTAAAAA                GCCC TGAA GGGC                 TCTTTTTAATCTTCA  83 31
         spx 1811589 .. 1811601 -  -7.7  -5.47821   AGGTATTTAAAAAAA                GCTCT ACA AGAGC                TTTTAGAGCGCAGCA  93 28
JHX97_RS09125 NONE
        ruvX NONE
JHX97_RS09115 1810448 .. 1810462 -  -5.7   -5.6473   ATAACATTAAAAAAA               TAGCC CTCAC GGCTA               CTTTTTAACATAGTG  86 52
JHX97_RS09110 1808466 .. 1808509 -   -10  -5.68023   CGACAACTAAAAAAA TCAATATATTGTG-TCAAG TTTTTTG CTCGAACACAATATATTGA TATTAAATTACTTTT 100 33
        nrdD 1806147 .. 1806177 - -10.7  -4.06533   GAAACCATTAAACAA       TAAAAGATTGCTT GCATG AAGCAACCTTTTA       AGCATATCATATTTC  93 70
JHX97_RS09100 NONE
JHX97_RS09095 1804927 .. 1804943 -  -3.7  -3.26471   TTATTTCCATATCAA              TTCCTAA TCC TTAGGCA              ACTCTACCGTTAACT  49 12
JHX97_RS09090 NONE
        nrdG 1803616 .. 1803629 -  -8.1  -5.21709   GTCTATATCAAAAAA               GAGGC CTAG GCCTC                TTTTTTAGTCTTTAT  90 194
JHX97_RS09070 1801225 .. 1801243 - -13.2  -5.51046   TAAAGACAGAAAAAA             GCCTTGCA AAA TGCAAGGC             TTGCTTTTCTTTTTC 100 273
        treP 1798218 .. 1798246 - -11.2  -3.63744   TTCCTCCCTAAAATA       GTTTCAGGAACTG ATCT CAGTTCCTGAA-C        GTTTTCTCTTAGTAA  90 43
        treC 1796533 .. 1796571 - -16.2  -3.28712   CTTTTTTCGTGACAA   TCACCAAAAGCCTGAGGC CTA ACCTCAGGCTTTTAGTTA   GTTATCAGCTAAAAT 100 23
        pepO 1794396 .. 1794420 - -13.7  -5.32565   TAAGGAAGCAAAAAA          CTGATCCTGTG TTT CACAGAATCAG          TCATTTTTATAATCA 100 71
JHX97_RS09030 1787872 .. 1787893 - -10.2  -4.68124   GCAACATAGATAAAA           CCCTCTGA TTCACT TCAGAGGG            TTTTCCTTAGCTTTT 100 32
JHX97_RS08985 1775995 .. 1776022 - -11.4   -4.2535   ACAGCATATTTAAAA        GAAGTTTTGAGC TAAC GCTCAAAGCTTC         TTTTTGAAATTTTTT 100 39
JHX97_RS08970 1773335 .. 1773371 -    -6  -5.75538   CGCAAAAAATAAAAA   CCTTGATTTAACAACGT TTTC ACGAAGTTAA-TCAAGG    CTTGTTTTGTATATA  88 39
JHX97_RS08965 1772629 .. 1772652 -  -9.6  -5.42514   GTAGAAATCAAAAAA          GCAGTTGTTG TTTC CAACATCTGC           TTCTCTTTAGTTACT 100 50
JHX97_RS08960 NONE
JHX97_RS08955 1769433 .. 1769461 -  -9.8  -3.75015   AGAATCTTTAGTAAA       GTTAGCACTC-AT GTTC ATCGAGTGCTAAC        TTTATATTCTATTTT  83 140
       groES NONE
        groL 1767332 .. 1767368 -  -7.4  -5.68023   TCACAACTAAAAAAA    CAAAGATGGGATATCA TGAGT CGAAATCCAATCTTTG    TTCTTTTTTCATAGT  93 98
JHX97_RS08940 1766446 .. 1766466 -  -6.9  -3.58365   TAGTATACTAGATAA            GACTTAAAG AAA CCTTAAGCC            AAAAAAACAACAAGA  68 504
JHX97_RS08930 1762743 .. 1762783 - -14.9  -3.57792   TGACGCAGTCTTAAA  CGCTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAGTT  TATCTGTTTTCATAG 100 95
JHX97_RS08920 1760798 .. 1760814 -    -3  -2.77222   ACTATGATCTTAAAG              TAACCT TGATT AGGTCA              TCGAAATATGTTTTG  43 18
JHX97_RS08915 NONE
        rpmG NONE
        secE 1757979 .. 1757998 - -13.6  -5.34555   TGATACTACAAAAAA            GGCTGGGA ATAC TCCCAGCC             TAGGCTTTTCCAAGC 100 68
JHX97_RS08895 NONE
JHX97_RS08890 1755108 .. 1755129 -  -2.2  -5.99154   CATCAAACAAAAAAA           GCCC-TGAC GTTTG GTCTTGGGC           CTCTATAAATATCAT  87 59
JHX97_RS08885 NONE
JHX97_RS08880 NONE
JHX97_RS08875 1752860 .. 1752879 -  -5.7  -5.00616   CCTTTTTCTAAAAAA            CCACCTC TAACTG GAGATGG             TCTCAAGAATTTGTG  77 52
JHX97_RS08870 NONE
JHX97_RS08865 NONE
JHX97_RS08860 1748372 .. 1748410 -   -17  -3.01329   CCAACCAACAATAAG   TAAAACAAGTCTAGGAAG TGA CTCCCTAGACTTGTTTTT   TTGAGGTTATCTGGC 100 67
        sdaB 1746575 .. 1746594 -  -7.2  -5.06735   GACAAATCATAAAAA            GCAATGAC GGCA ATCATTGC             TTTTTCTAGTATTTT  88 113
JHX97_RS08840 1744869 .. 1744881 -  -3.3  -4.07568   TGGTTTTGGTCAAAA                GACGC TAT GAGTC                GTTGCACTTATCATC  55 74
        speB NONE
JHX97_RS08830 1742924 .. 1742955 - -12.4  -4.31329   TCAAAAATCGTAAAA      GGACTGAGTCCCAT CTCT ACAGAACTCAGTCC       TTTACCTTGGCATCT 100 225
        prsA 1741589 .. 1741622 - -15.6  -2.60496   CTGGTTTTTAAATAT     TAAAGACTCTATCC TTATTT GGATAGAGTCTTTA      GCTTTATGACATTGC 100 149
JHX97_RS08815 NONE
JHX97_RS08810 1740100 .. 1740137 -  -2.8  -5.45802   TTTGGAAAACAAAAA   TCATATAACCGTTC GCTCACATAA GCACGGGTATATGA    TTTTGTACATTTGCG  76 154
JHX97_RS08805 NONE
JHX97_RS08800 NONE
JHX97_RS08795 1736633 .. 1736654 -  -5.9  -3.14136   GTATCAAGCAGCTAA           GGATGAC ATCAAAGG GTCATCC            TTTTTGACTTTTATG  57 54
JHX97_RS08790 NONE
JHX97_RS08785 NONE
JHX97_RS08780 NONE
JHX97_RS08775 1732436 .. 1732473 - -10.9   -5.9362   CAAAAGACAAAAAAA   CTTCCAATAACTTAG CTTGCGCT CTAAATTATTGGAAG    ATTATTTGACCTATT 100 44
JHX97_RS08765 1728291 .. 1728312 - -13.1  -4.60797   CTTCTATACATAAAA           GAGAGAACC GACT GGTTCTCTC            TTGATGTTCACTCAG 100 58
      scpA/B 1724467 .. 1724493 - -16.8  -5.76633   GCACATATAAAAAAA         TAGAGAGAACCA AAT TGGTTCTCTCTA         TTAAATAAGCTCTTA 100 56
         lmb NONE
JHX97_RS08750 1720734 .. 1720750 -  -6.7  -2.66787   CTAACATGGATACCA              TTTCTTT GCA AAAGAAA              ACCGCTATTATCCAA  57 132
JHX97_RS08745 1720464 .. 1720478 -   -10  -5.20216   CACACCATTAAAAAA               CCAGCT TAC AGCTGG               TTTTTTTAATTATTT 100 35
JHX97_RS08670 NONE
JHX97_RS08665 NONE
JHX97_RS08660 1703959 .. 1703984 -  -3.9  -5.87996   GAAGCAATAAAAAAA         GGCCGTTGACA CAAT CGTGAACTGCC          TGTTCGTTTCTTTAG  90 71
JHX97_RS08655 1701449 .. 1701460 -  -2.2  -2.73771   CCATAGGGCCTAAAC                CAGC TATG GCTA                 TTACCTATCACTATC  40 54
JHX97_RS08650 1700465 .. 1700502 - -17.2  -3.82218   ACTGACATGACTAAA   GAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTC    TTTGTGTTCTCCTAA 100 111
JHX97_RS08635 NONE
JHX97_RS08630 1695655 .. 1695684 -  -8.7  -5.66684   TAACTGACAAAAAAA       GCAAGCAACACGCT ATC AACA-GTTGCTTGC       TTTTTTCTAACCTCT  95 53
JHX97_RS08620 1693085 .. 1693102 -  -9.9  -5.18357   CAAGGCAGCAAAAAA             GAAAGCC CTGT GGCTTTC              CTAATATTTCAACAA 100 26
        ugpC 1691625 .. 1691657 - -19.5  -3.00525   TTTGCGCAAATGACA      TGATAAAAAGGTTGG AAC CCAACCTTTTTATCA      ATATCGCTTATACCT 100 40
JHX97_RS08610 1689871 .. 1689901 -  -8.4  -4.32649   ATCTCAAAAATCAAA      CAGCCAAAACGAG TTTCCG CTCGCTT-GGCTG       TTGGGTAAACTCAAA  83 54
JHX97_RS08605 NONE
JHX97_RS08600 1685728 .. 1685739 -  -2.2  -2.90496   TTCTTCTTTAAACGA                GACGC TAA GCG-C                AGTGCTTTACTCACG  41 32
        yajC 1685233 .. 1685254 -  -3.1  -5.83211   GATCAAAACAAAAAA           GTTTGGCATA TTT CAT-CCAAAC           TTTCCCCGCCTTAAT  89 36
JHX97_RS08590 NONE
JHX97_RS08585 NONE
        rseP 1682075 .. 1682108 - -12.6  -3.15544   TTTCATTTTGAGTAA     GACCTCAACCCT TGCAAATCTT AGGGTTGAGGTC      TTTTTCGATCTTTAA  91 75
JHX97_RS08575 1680067 .. 1680091 -  -8.6  -4.80882   AGTTCACAGCAAAAA         GAGGCCGCTCT AAAC AG-GCAGCCTC          TTCATTTCTTTTTTA  93 38
JHX97_RS08570 NONE
JHX97_RS08565 1674885 .. 1674895 -    -4  -3.02096   TGTAGTAATTATATA                 TTCT CTA AGAA                 GAGCTGTAAAGAGAT  47 45
JHX97_RS08560 1674209 .. 1674236 - -11.5  -3.27022   TTGATTTTAGACTAA        CAAAAAAAGGC TAAAGG GCCTTTTTTTG         TTAGTCTAAATAGCC  87 31
JHX97_RS08545 1672957 .. 1672967 -  -3.2  -2.85147   CTTAAGCAACAGAAC                 TAGC AAG GCCA                 AATAGCCAAGAGGCT  44 1
        rpsO 1672354 .. 1672385 - -11.8  -3.54475   TTCTTCATGATACAA      CAAAAGATACCTCA TCAC TGAGATACCTTTTG       TTATTAGATAAAATC  91 156
JHX97_RS08535 NONE
JHX97_RS08530 NONE
JHX97_RS08525 NONE
JHX97_RS08520 1667647 .. 1667664 -  -4.1  -5.77856   AACAAAGCAAAAAAA             GCAGG TTGGTATG CCTGC              TTTCGTCTCCTAATA  91 41
         pnp NONE
JHX97_RS08510 NONE
        cysE 1663478 .. 1663496 - -11.8  -4.90266   TTTATTAACGAAAAA             CCTTCACA ACC TGTGAAGG             CTTCAGAAAGTAGAC 100 462
JHX97_RS08500 NONE
JHX97_RS08495 NONE
JHX97_RS08490 1661426 .. 1661449 -    -9  -4.29738   TCAGATCTATGAAAA          TAAGAGTCTCC TAG GG-GACTCTTA          TGAGGATATCAATTG  89 23
JHX97_RS08485 1660423 .. 1660433 -    -4  -2.66634   GAGTTTATTATACCA                 TGAA TGT TTCA                 AAATAAATGCATAGA  45 46
        rlmB NONE
JHX97_RS08475 NONE
JHX97_RS08470 1658148 .. 1658171 -  -8.2   -5.2189   TTAAGCAGCAAAAAA          GGATTGAGGA TTTC TCTTCAATCC           TTATAAGGGATTAAC  90 36
JHX97_RS08465 NONE
JHX97_RS08460 1657316 .. 1657332 -  -6.5  -2.65298   TCGATTTAGGAGAAT              GGCAGAG CTG CTCTGCT              GGTGTTAACGAGAAT  57 30
        rplM NONE
        rpsI 1656207 .. 1656233 - -12.4  -5.77632   AAAACGACAAAAAAA         GCACCTTGCAAG AGA CTTGCAAAATGC         TTGTAATCGTTGATG 100 52
        lacA NONE
        lacB 1651551 .. 1651567 -  -5.1  -2.86124   TTTATTCAAATATTA              GTCGTGA TAT TCACCAC              GGACCCATTTTTCTA  51 6
JHX97_RS08410 NONE
        lacD NONE
JHX97_RS08400 NONE
JHX97_RS08395 1647489 .. 1647526 - -11.7  -4.59511   AATATCTTTCAAAAA   TAAAGTTCCCAAA-ACAA TTT TTGTGTTTGAGAACTTTA   CGACATTTAAACTGT 100 45
        lacG 1645926 .. 1645943 -  -2.7   -3.3334   AACCCGATCTTACAA             CTAATGG ATTA CCATCAA              CAGCAAATAATACTA  45 134
JHX97_RS08385 1645334 .. 1645360 - -12.4  -4.68994   ACCACTACTTAAAAA         TCCTGCCTAGAC TGA GTCTAAACAGGA         AATTTTTAGTCTGCT 100 58
        lanM NONE
JHX97_RS08375 NONE
JHX97_RS08370 1640346 .. 1640360 -  -4.4   -2.7644   ACTTAATCGTTAAAG               TTAAAA GAT TTTTAA               AATTAATTTTTGATT  47 28
JHX97_RS08365 NONE
JHX97_RS08360 1638136 .. 1638158 - -11.4  -3.17714   GGAAATCCCTAGCAA           CGACACAAGT AAA ACTTATGTCG           TTTGATTATCTGCAA  87 42
JHX97_RS08340 1630300 .. 1630311 -    -3  -2.87944   TATTAGTATACGATA                TCTT GTAT AAGA                 TTGTCAACTCTTTTT  44 155
JHX97_RS08335 1628449 .. 1628462 -  -2.3  -3.06796   TCCCAGCTGAGCTAA               GGCCC CACA AGACC                TCTCAAAACTAAATA  42 69
JHX97_RS08330 1628276 .. 1628308 -  -9.1   -3.3972   GTAGAAAATTAGGAA      TCTGACCATGTGTGC CTT GCACACAAGGGAAGA      TTGTCTATTTTCCTA  79 97
JHX97_RS08325 NONE
         rrf NONE
JHX97_RS08315 1624875 .. 1624892 -  -6.3  -5.61824   TAAAATGCAAAAAAA             GATAGGA CGCT TCCTACC              TCTTTCTACTCCGCC  89 33
JHX97_RS08310 NONE
JHX97_RS08305 1624066 .. 1624078 -  -6.3  -3.10701   GAAAGACGTATTGAA                GCTTA CTC TAAGC                TACTAACGATTTAAA  59 118
        truA NONE
JHX97_RS08295 NONE
JHX97_RS08290 NONE
JHX97_RS08285 1621398 .. 1621445 - -10.3  -5.11033   TATAATCTTAAAAAA TCCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGGG TTTAGGATTTACGGA 100 27
JHX97_RS08275 1618880 .. 1618906 -  -8.1  -5.69262   TTAGAAAAAGAAAAA         CCAGACTAGAA AGACG TTCTAATCCGG         CTTGTACGTTTTGTT  93 52
JHX97_RS08270 1618010 .. 1618034 -  -2.8  -5.54907   TCTAGAAAACAAAAA          TAGCCCCCTA TTAAC TAGAGAGCTT          TTGCCTGACCTCATA  76 123
JHX97_RS08265 1616276 .. 1616292 -  -3.7  -2.62038   CTTAAAACCACTAAT              TGCTATT TTT AATAGCT              GCTGTAACAAAAGCG  45 4
JHX97_RS08260 NONE
JHX97_RS08255 1615007 .. 1615029 -  -9.2  -5.38326   TTAACCAAACAAAAA           GAGACGAATC AAT GATTCACCTC           TTACATTATGCGGAG 100 34
JHX97_RS08250 1613912 .. 1613925 -  -5.2  -5.09225   ATTGTATCTAAAAAA               GCCC TCAAGG GGGC                TTTAGGGTATTTAGT  79 49
JHX97_RS08245 1613348 .. 1613382 -  -8.9  -3.08696   ATGGATAGAAATAAG    CTAATAAAAA-AAGCC CTAA GGCTTATTTCTATTAG     ATGCGTTCTACTTTA  71 22
JHX97_RS08240 NONE
JHX97_RS08235 1611155 .. 1611176 -  -7.3  -5.09685   CAATATAGACAAAAA           GAGTCAGAC CTTT GCCTAACTC            CTCTTTTTTTATTGT  88 47
JHX97_RS08230 1609906 .. 1609916 -  -2.6  -2.84203   AAAAGTCAATACAAC                 TTAA CAT TTAA                 TCAATACTATGTTGT  42 180
JHX97_RS08225 1608985 .. 1608996 -    -3  -2.70932   CCTCTTTTTCAATTA                CTTT ATTT AAAG                 CTTTTTAAACTTTTA  43 16
JHX97_RS08220 1607556 .. 1607573 -  -7.7  -5.65513   GATCAACTAAAAAAA             GACATGC ATCA GCATGCC              CTTTACTATATATTA  93 50
JHX97_RS08215 1606777 .. 1606793 -  -2.3  -3.00298   CCTGTCAAGTATATA              TGTTATA TTA TCTAACA              TCACTGTGTTTTTTG  42 16
JHX97_RS08210 1606338 .. 1606356 -  -3.2   -3.5365   TTAAATTTTATACAA             TTCATATC TTA AATACGAA             AATTACCAATATGCT  50 15
        glnA 1604930 .. 1604952 - -10.6  -4.19258   ATAGCTCATCCAAAA           GACCCACTCA ACT TGAGCAGGTC           CTGATAAGTCTAATA 100 35
        tsaB NONE
        rimI NONE
        tsaD 1600313 .. 1600334 - -10.2  -3.45023   TTATCATCATGACAA           CCCGGTAT GCCAAG ATACCGGG            TTGTTTTTTCAAAGG  85 84
         udp NONE
JHX97_RS08160 NONE
        deoC 1595945 .. 1595969 -  -7.2   -5.1287   TTCATAGCTAAAAAA          GCCTATTATC ACTAA GATAGTAGGC          TTTTTAACTCCTATT  88 87
JHX97_RS08145 1594002 .. 1594016 -  -7.8  -5.00616   TTTTCCTCCAAAAAA               GACCCT GAT AGGGCC               TTCGTCATTTTTTGT  88 43
JHX97_RS08140 1593349 .. 1593364 -  -4.6  -2.58663   ACCTAGCGTTATAAG              CAAGGG CTAA CCCTAG               GGATTTTTTTATTTT  47 59
JHX97_RS08135 1592464 .. 1592489 - -10.5  -5.86609   CTAAAAAAACAAAAA         CTAGCTTGAGA AGGA TCTCAGGCTAG          TTTTTTTATGAGTTA 100 45
JHX97_RS08120 1591125 .. 1591148 -  -7.5  -5.13527   AATTAACAAAGAAAA          GTGCTTAGC AATATA ACTAAGCAC           TTTTTTGTTAATTGG  88 72
JHX97_RS08105 1586446 .. 1586486 -    -4  -4.97957   CACACAATAATAAAA  GCGGTAAAGAAAAGGACC ATAAA AGACCTTATCTTTATCAC  TTTATTTCATAGTAT  70 329
JHX97_RS08100 1585415 .. 1585439 -  -4.3  -5.38951   AACTCATATAAAAAA          GACAAGTTC CTTAAGC GAGCTTGTC          TTGAGTCTAAAAGAA  79 56
JHX97_RS08090 NONE
JHX97_RS08085 1582106 .. 1582145 - -17.5   -5.3236   ATAACTTATAAAAAA  GAACAGCCATCTCATTT GATTCA AAATGAGATGGCTATTC   TTTTTTCACTTATAA 100 133
        dinB 1578359 .. 1578408 - -12.3  -4.43307   GCTGTAATAAAATAA TGGACCAAAGAAGCTGATTAGGG AAAT CCCTAATCAGCTTCTTTTTTCTC CAAAATGAGGCGGAC 100 60
JHX97_RS08050 NONE
JHX97_RS08045 1572695 .. 1572724 -  -7.3  -4.41348   TTTCTCGTAAATAAA       GAACCTAAAGGTGA AAC TCA-CTCCAGGTTC       TTATATTAGTCACAA  78 48
JHX97_RS08040 NONE
JHX97_RS08035 NONE
        trxA 1569322 .. 1569358 - -18.3  -3.56161   GAAGTTAGTAGATAA    TAAAATAAAGCTCAGCG TGA CGCTGGGCTTTATTTTA    GTTAACTCAATTCAG 100 27
JHX97_RS08015 1566785 .. 1566804 -  -6.4  -2.70932   CTTTTGGTCTAATGA            CTCACTAC TTTT GGAGTGAG             TAAGTGAGGTATACT  57 150
JHX97_RS08010 1566471 .. 1566484 -  -3.1  -2.60723   TTAGTTGGAATTAAG               CGTCA AGTT TAACG                ATCATGTGACGAAGA  43 7
JHX97_RS08005 1565947 .. 1565958 -    -3  -2.52676   TATTCGTTCAACCCA                TTCT GACT AGAA                 TGGAAGATCGTCATC  42 20
JHX97_RS08000 1565524 .. 1565540 -    -8  -5.32565   TAATCAACTAAAAAA              CAGTCC GAAAT GGACTG              TTGGTTTATTAGTCT  90 34
        uvrA 1560631 .. 1560648 -  -7.7  -4.98616   TTAAAAGATTAAAAA             GGAGCTC AAAC GAACTCC              TAATCCTATTGTTGT  88 31
JHX97_RS07980 NONE
JHX97_RS07975 NONE
         efp NONE
JHX97_RS07965 NONE
        nusB 1557329 .. 1557375 - -18.3  -4.17023   CTAATTACTCTAAAA GACAAACAAGCATACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTC TTTTAATATTCGTAC 100 86
JHX97_RS07940 1549445 .. 1549483 - -12.7  -4.54477   TCAAAACCTATAAAA   GACTAAAAATCTGGGAC TATTC ATCTCAGATTTTTAGTC   TTTTGGTTAATCAAT 100 114
JHX97_RS07935 NONE
        manA NONE
        secA 1544654 .. 1544690 - -11.7  -3.79071   GTTAGAAGATTTAAA    CAGTGAGAAGCTGAGAA TTA TTCTCAGCTTCTTTCTA    TATACCTAACTTTGT  90 58
JHX97_RS07920 NONE
JHX97_RS07915 1543160 .. 1543172 -  -2.7   -3.0263   ATGATTTTCTTAATA                TATCC GAG GAATA                CGGTCACTTAAAAGG  43 7
JHX97_RS07910 1541409 .. 1541435 -  -9.5  -6.17268   TCACAATAAAAAAAA         GACAATAGCCC TAATC GTGCTATTGTC         TCAAAATCATTTATT 100 128
         shr 1537100 .. 1537112 -  -3.4  -3.61774   TATAACATCTCCAAA                TGTG AAAAA CACA                CCTATCTTGCGACTA  50 133
JHX97_RS07900 NONE
        isdE NONE
JHX97_RS07890 NONE
JHX97_RS07885 NONE
JHX97_RS07880 NONE
JHX97_RS07875 NONE
JHX97_RS07870 NONE
JHX97_RS07865 NONE
JHX97_RS07860 1527105 .. 1527139 - -11.5  -2.60508   GAGGTCTCAAAAATC     CCGAGTGGCGTCAAT CTCGT ATTGACGCCACTCTT     TTACCACAGCAAAAA  83 228
        recG 1524713 .. 1524728 -  -4.6  -3.92996   TCTTACACATAATAA              CATCCG TAAA CGGTTG               TGACAAGTTCTTCTT  59 249
JHX97_RS07850 NONE
JHX97_RS07845 1522710 .. 1522737 - -12.9  -3.85817   AGCTTCCTGTAGAAA        TGTCCCACTAA AACATA TTAGTGGGACA         TTTCTAGTACTTTAA  95 328
JHX97_RS07835 1520175 .. 1520185 -  -3.2  -4.71318   AACACCAAAAAACAA                 GCAG CAT CTAC                 AACGAAATTGCTTGT  65 106
JHX97_RS07825 1518079 .. 1518092 -  -4.5  -3.39948   TTATAACAAAGCTAA               CTCGC TTTT GCAAG                GAATTATCAGAAAAT  53 179
        codY 1517213 .. 1517231 - -10.4  -5.28683   ATTAACAGCAAAAAA             CATCTCTT GAA AAGAGATG             TTTTCTTTTTCTATT 100 40
JHX97_RS07815 1516471 .. 1516481 -  -3.2  -3.02739   CCTAACCCATACATA                 CGGT AAA ACCA                 CATAGAGCAATGATT  45 89
        gatC NONE
        gatA NONE
        gatB NONE
JHX97_RS07790 1512034 .. 1512053 -  -2.2  -4.25104   CGTGCCTGAGTAAAA            TAGAAAAA CAAT TCCTTCTA             TTAAGATAGATAGAC  54 104
JHX97_RS07785 1511644 .. 1511669 - -13.3  -5.02074   TTATGTTGCAAAAAA         GGCTGCTTGGA AACT TCCATGCAGCC          TTTTTTTAATACCTT 100 31
JHX97_RS07780 NONE
JHX97_RS07775 NONE
JHX97_RS07770 1509248 .. 1509274 - -15.4  -5.63857   AAAAACTCAAAAAAA         TTAGCACTCTTT TAT AAAGAGTGCTAA         TTTCAGTCATAGTTT 100 28
        hrcA NONE
        grpE NONE
        dnaK 1505469 .. 1505490 -  -8.8  -4.67353   TTATTTAGCCAAAAA           CAGAGGTT TGGTAC AACCTCTG            AATTCGGATATTAAT  93 61
        dnaJ 1504063 .. 1504098 -  -5.5  -6.02914   TTGACATAAAAAAAA    CGTATAACTTCGGGA AAATTA TCCTGAGATTATACG     TTTGACATCTTTAAA  93 36
JHX97_RS07745 1503048 .. 1503060 -  -4.9  -3.52963   TCCTAACAATAAAAC                TTTGA CAG TCAAA                TTATATCAGAGTTAA  57 62
JHX97_RS07740 NONE
JHX97_RS07735 1501594 .. 1501606 -  -7.7  -3.85817   ATTTGTTTTTATAAA                TGTGC TAG GCACA                TGAATAACTAGATTC  73 33
JHX97_RS07730 1501160 .. 1501172 -  -4.9  -3.93867   AAATAAGGAGAATAA                TTTGA TAA TCAAA                CTATTATAGTAAGAA  62 182
        fabK NONE
        fabD NONE
        fabG NONE
        fabF NONE
JHX97_RS07705 NONE
        fabZ NONE
JHX97_RS07695 NONE
JHX97_RS07690 NONE
JHX97_RS07685 1493040 .. 1493069 - -10.8  -2.82317   TAAATAATAAACTCA       CCCCAGAGATCA TTAAAG TGATTTCTGGGG        TTTACTATTTTAAAG  81 220
JHX97_RS07650 1485055 .. 1485082 -  -2.8  -6.00086   ATATCAGAAAAAAAA        CATACTTCCAAGC ACT ACCTAGAAG-ATG        ACTCAAATAAGGTAT  91 127
        tsaE NONE
JHX97_RS07640 NONE
JHX97_RS07635 1482767 .. 1482790 -   -11  -5.19879   TTTTAAACATAAAAA          CCCTCAGAAC GTTA GGTCTGAGGG           TTGATATTAGCAGGA 100 13
JHX97_RS07620 NONE
JHX97_RS07615 NONE
JHX97_RS07610 NONE
        trmB 1478516 .. 1478538 -  -6.4  -3.78775   CTCTCCATTACTAAA           GAAGTTAATA CTG TATCAACTCC           TTTATGTTATCATAT  66 58
JHX97_RS07600 1478324 .. 1478345 -  -8.7  -4.68724   CCACTTAATACAAAA           GTGGCGAGA CATA TCCCACCAC            CTTTCTGTATTATTT  93 100
        rimP 1477665 .. 1477677 -  -3.3  -3.20307   TTAATACGATCAATA                GCCCC CTA AAGGC                TCCCTTAATTCCTTT  47 124
        nusA NONE
JHX97_RS07585 NONE
JHX97_RS07580 NONE
        infB 1472778 .. 1472806 - -12.5  -4.13014   TCCACATTTTTAAAA        CAAAAGCTAGGCT GAA AGCCCAGCTTATG        ACATTGCTACCTGTT 100 175
        rbfA 1472346 .. 1472370 -  -7.9  -5.03201   AATAACAATTAAAAA          GAGCTCTATCA TAA TGATAAGGCTC          TTTCTATCATAACAT  88 55
JHX97_RS07560 NONE
JHX97_RS07555 NONE
JHX97_RS07550 1467857 .. 1467868 -  -4.4  -4.67011   AATTCTATTGAAAAA                TACC TCTT GGTA                 GATAACCAAAAATTC  72 382
JHX97_RS07540 NONE
JHX97_RS07535 NONE
JHX97_RS07530 1464631 .. 1464655 -  -8.6  -4.63218   TTTCTTTCAAGAAAA         GCGCT-TGCGG GTAC CCACAGAGCGC          CTTGCCTTACATGAG  89 136
        lacA NONE
        lacB NONE
        lacD 1461955 .. 1461983 - -11.2  -5.37345   TGTAAGGATAAAAAA        GCAAGGATAAAA CCCAT TTTCATCCTTGC        TACAAAAGATTCAAA 100 102
JHX97_RS07505 NONE
JHX97_RS07500 1460380 .. 1460412 -   -18  -3.14132   GCTTGCCTCTATTAA      CGTAAAAAGGTTCC TTTTG GGAACCTTTTTACG      TTAATAGTTAGTCTT 100 33
JHX97_RS07490 1458564 .. 1458580 -  -4.5  -3.55966   TCATCAAAAGAGTAA              TACAAAA GTT TTTCGTA              AAATCAATCAATAAA  55 137
JHX97_RS07480 1455973 .. 1456000 -   -10  -5.08824   TTTGGATTCAAAAAA        GAAAACGTGGAT GATC ATTCACGTTTTC         TCTTTTTTTAAAGCT 100 33
        nagA 1454690 .. 1454737 -    -2  -5.22481   CATAAAGAAAGAAAA TACAAAAAGAATTGGCCTGCCA GACA TAGCTACCCCAATCCTTTTGTA TCTCTTAGGCATCAA  70 30
JHX97_RS07470 1453746 .. 1453769 -  -6.8  -5.00884   ACCGTTTTCAAAAAA          GATTTAGCGA ATTA TGGCTAAATC           TTTGTAGTTTCTTAA  83 37
JHX97_RS07465 1452856 .. 1452905 - -17.3   -5.1675   CTAGGCACCAAAAAA CCGCATTTTGATGCTCCTAAATC ATAA GACCTAGGGGCGTCAAAACGCGG TTCCACCCTAATTTA 100 233
        glyQ 1451615 .. 1451639 - -13.1  -2.78798   AGGGGGGACGCAAAG          TGAAATTATCC AGT GGATAATTTCA          GAAAACAAAAGTGTT  87 210
JHX97_RS07455 NONE
JHX97_RS07450 1448967 .. 1448993 -   -11  -3.99592   AGTCATCACGATAAA         CAAAAAGCAGTT CAG AGCTGCTTTTTG         TCTTATGATTTTGGG  93 28
JHX97_RS07445 1448326 .. 1448367 - -13.2  -4.81644   CAAAGAAAATCAAAA GACCCAACAATCACTCTG CTAATC CAGAGTCATCATTGGGTC  ATAAAGAGAACTAAG 100 135
        glpK NONE
        glpO NONE
JHX97_RS07430 1443992 .. 1444027 -  -4.8  -5.38054   TCCTATAAAGAAAAA    GCAAAGGAGCTGGCCTA TGA TA-GCCAACCCCTTTAG    TGATGGTTAGGACAT  80 32
JHX97_RS07425 NONE
JHX97_RS07420 1441097 .. 1441112 -  -6.2  -2.98282   ACCAAGTATCACACA              GTTTTG TGTG CAAAAC               TAGACTTAGCTGCTG  57 3
         fsa 1440284 .. 1440312 -  -4.5  -3.44124   ACGATGAATATAAGA        GAGCCTGTTGACA CAG TAGCCACAGACTC        TTTAGCCTTATTTTT  53 33
         tkt 1438076 .. 1438101 - -13.5  -5.44119   TTTATTTTAAAAAAA         CAGAGTAAATC ATTT GATTTACTCTG          TTTGGGATGTGTAAC 100 41
JHX97_RS07405 NONE
JHX97_RS07400 NONE
JHX97_RS07395 1435216 .. 1435231 -  -6.8  -4.95758   ATTATAGCATAAAAA              CAGCCC CAGA GGACTG               TTTTTCCGAATAATG  83 52
JHX97_RS07385 NONE
JHX97_RS07380 NONE
JHX97_RS07375 NONE
        rsmH NONE
        ftsL NONE
JHX97_RS07360 NONE
JHX97_RS07355 1427943 .. 1427958 -  -4.7    -3.317   AGAGACAAGCAAAAG              GAGTG GGACAA CACTC               ACAAAATCAGCATTT  54 113
JHX97_RS07350 NONE
JHX97_RS07345 NONE
JHX97_RS07340 1424761 .. 1424778 -  -5.5  -4.99312   AACATAACAAGAAAA             GCCCAGG AATA CCTAGAC              CTTTTTATTATAACA  77 52
JHX97_RS07335 NONE
        trxB NONE
JHX97_RS07325 1421852 .. 1421863 -    -3  -3.93695   GCTAGGATTTAGAAA                TAAC TTGA GTTA                 TCGCTAAAGTAAAAA  55 110
JHX97_RS07320 NONE
        nadE 1419442 .. 1419457 -  -7.6   -5.4505   TTCTTCAAGAAAAAA              GTTAGG ATAA CCTAAC               TTTTTTTGTTTTCTT  93 65
        pepC 1417603 .. 1417629 -  -9.4  -5.33026   TAATCTAAATAAAAA         GCGAGTCCAC GTTCTGT GAGGACTCGC         TTTTTATATGACACA 100 371
        gpsB NONE
        rnpB 1413292 .. 1413307 -    -9  -5.04868   TTAAATCAAATAAAA              GCTAGC AAGT GCTAGC               TTAACCTATTATGCA  95 44
JHX97_RS07280 NONE
JHX97_RS07275 1410588 .. 1410611 - -10.4  -5.30155   TTATTAATCAAAAAA          CTGAGACAAG TTGC CTTATCTCAG           TTTTTTTGATTTTCT 100 40
JHX97_RS07240 1404048 .. 1404058 -  -2.6  -2.55551   CACAATTCCAATTCA                 TTTT TAA AAAA                 ATTAACATCTGGGCC  41 56
JHX97_RS07235 1402327 .. 1402352 - -13.5  -3.92641   AAGGCTAGTCATAAA         GAAAAAGAGGA TAAT TCCTCTTTTTC          TACTTGGCATAATCA 100 25
         gmk NONE
JHX97_RS07225 1401256 .. 1401278 -  -8.6  -5.32699   CTAAATATGAAAAAA           TCTAAGATTT CTG AAACCTTAGA           TTTTTTCTCCTTCTT  95 21
JHX97_RS07220 NONE
JHX97_RS07215 NONE
        rsmB NONE
JHX97_RS07205 NONE
        pknB 1393796 .. 1393838 -  -7.9  -4.68994   ACGAGTAGTTAAAAA GAATAGTTAGTGGCATGCC AGTAA AACATGAGACTAACTATTC TTTGTTAAGGTGTTT  83 30
JHX97_RS07195 NONE
JHX97_RS07190 NONE
JHX97_RS07185 NONE
JHX97_RS07180 NONE
JHX97_RS07175 1389566 .. 1389594 -  -3.1  -5.69793   AGACGAAATAAAAAA        GGGTTTGGAAC TACTAAG GTTCCAGACTC        TTTTTAGTGTTCTTT  82 10
JHX97_RS07160 NONE
JHX97_RS07155 1385833 .. 1385852 -    -5  -3.14848   TGCTTTCATGAAAAT            TTGCAAGT TTTA ACGTGCAA             TTGACAAACTTTTAA  52 15
        raiA 1384960 .. 1384983 -  -4.6   -6.4275   GAAAAAGAAAAAAAA          CGCGCTTT ATATTCTG AAAACGCG           CTTTTTCATATTTTT  95 256
JHX97_RS07145 1382699 .. 1382712 -  -2.3  -3.06796   TCCCAGCTGAGCTAA               GGCCC CACA AGACC                TCTCAAAACTAAATA  42 69
JHX97_RS07140 1382526 .. 1382558 -  -9.1   -3.3972   GTAGAAAATTAGGAA      TCTGACCATGTGTGC CTT GCACACAAGGGAAGA      TTGTCTATTTTCCTA  79 97
JHX97_RS07135 NONE
         rrf NONE
JHX97_RS07125 NONE
JHX97_RS07120 NONE
JHX97_RS07115 NONE
JHX97_RS07110 NONE
JHX97_RS07105 1378725 .. 1378743 -  -4.5  -2.70932   CGTGCGCTCTAACCA             CCTGAGC TACGC GCCCAAG             CTAATAGCTTGGAAA  47 56
JHX97_RS07100 1378649 .. 1378659 -  -2.6  -3.44586   ACCAACGGACCATAA                 TAAT ATA ATTA                 TAAATAATGGGCACG  47 32
JHX97_RS07095 1378476 .. 1378505 - -13.9  -5.44198   AAGAAACAATAAAAA       GCTTAAATTTGTT ATAC AACAAATTTAAGC        TTTTTATCATTAAAA 100 90
JHX97_RS07055 NONE
JHX97_RS07050 1370790 .. 1370809 -  -6.6  -3.58905   ACTTTTTATATACAA            TATATTGA TTTT TCAATATA             GTCTTGATATAATAT  64 460
JHX97_RS07040 NONE
JHX97_RS07035 NONE
JHX97_RS07030 1370014 .. 1370025 -    -3  -2.61322   ATATCTTCTAAATAC                TGAT TATC ATCA                 CCATTTGTTCGGTAG  43 65
JHX97_RS07025 NONE
JHX97_RS07020 NONE
JHX97_RS07015 NONE
JHX97_RS07010 NONE
JHX97_RS07005 NONE
         ssb NONE
JHX97_RS06990 NONE
JHX97_RS06985 NONE
JHX97_RS06980 1365036 .. 1365047 -  -2.2  -4.09685   TCTTATCTGCTAAAA                CGTC ATCA GACA                 TCTTTATTTTGCATC  54 137
JHX97_RS06975 NONE
JHX97_RS06970 NONE
JHX97_RS06965 NONE
JHX97_RS06960 NONE
JHX97_RS06955 NONE
JHX97_RS06950 NONE
JHX97_RS06945 1361733 .. 1361749 -  -5.1  -3.25787   TATCGAACAGGAACA              GTCGG AATCGAA CCGAC              TTGCAACCGTTGTCC  54 506
JHX97_RS06935 1359563 .. 1359578 -  -4.6  -3.10775   ATTCGTAGTTAAAAG              GGCGTC TAAT GACGTC               TTTTTGTTTATTTGA  50 58
JHX97_RS06930 NONE
JHX97_RS06925 1356640 .. 1356652 -  -4.9  -3.54741   TATTAGCTTGCCAAA                GATAA GGA TTATC                GGCTAAGCTCGCTGA  57 174
JHX97_RS06915 1355019 .. 1355041 -  -9.2  -5.37345   TTTAAGTACAAAAAA           GCACCTAGCT TTT AGCTAAATGC           TCTAGATTTAATAAG 100 60
JHX97_RS06910 1354668 .. 1354683 -  -5.4  -5.21236   AAGGCATAATAAAAA              GCCGTA TTGC TACGAC               TTTGACTTCTAAAGG  82 65
JHX97_RS06900 1353115 .. 1353128 -  -2.3  -3.18383   ACCTCCATCGACTAA               GACTC GAGA GCGTC                ATCTTCCTCTCTCTT  44 58
JHX97_RS06895 NONE
JHX97_RS06890 NONE
JHX97_RS06885 1351956 .. 1352010 -  -5.1  -4.62069   GTTTGATTTTAAAAA TAGGGATACAGTGCTGAAAGCTC CTATTTATC AAGCTTTTTCCTCTGTATCCCTA TTATATCTCAAGCCC  69 1
JHX97_RS06880 1351516 .. 1351538 -    -7  -5.14563   TTTTTCACTAAAAAA           GACGATAGTT TTT ATCTATCGCC           CTTGGTAACCATTTT  88 52
JHX97_RS06875 NONE
JHX97_RS06870 1349782 .. 1349804 - -13.4  -3.21218   ACTGTCTACCACCAA           GGGTGTCGTG TTT CACGACTCCC           TTATCTTCTTCCGCA  93 180
JHX97_RS06860 1347436 .. 1347464 -    -9   -5.5112   TTGAGTAATAAAAAA        GCAGCAAATCTA TTTTT TAGACTTACTGC        ATTCTTGTAATAACC  95 19
JHX97_RS06855 NONE
JHX97_RS06850 NONE
JHX97_RS06845 NONE
JHX97_RS06840 NONE
JHX97_RS06835 NONE
JHX97_RS06830 NONE
JHX97_RS06825 NONE
JHX97_RS06820 NONE
JHX97_RS06815 1339413 .. 1339439 - -10.2  -3.41024   GTTTTCAATATAAGA         GGGCGAAAGA TTTTCTC TCCTTCGCCC         TGTGTTTTACAGCAA  85 59
JHX97_RS06810 NONE
JHX97_RS06805 1330175 .. 1330189 -  -7.1   -3.5754   AAACAGTTAAATTAA               GCGAC TTCAT GTCGC               ACCCACAAATATGCA  68 7
        ltrA 1327895 .. 1327922 -    -4  -3.61398   TTTCCCCTCTAAGAA        CCGTGCATGAGA GTTT CCCCTCACACGG         CTCAAGTTTTTATAA  52 48
JHX97_RS06790 1325425 .. 1325448 -  -4.7  -5.80364   ATTGCAAGAAAAAAA          GAATAC-CCT TATGC AGGAGTATTC          TTCCTCAAAATTGAC  95 177
JHX97_RS06775 1322883 .. 1322915 - -15.1  -3.66908   TTGTCTTAAAACTAA      TACAAGGAAAACACC ATT GATGTTTCCCTTGTA      AAATACTTATATTTT 100 49
JHX97_RS06770 NONE
JHX97_RS06760 NONE
JHX97_RS06755 NONE
JHX97_RS06750 NONE
JHX97_RS06745 NONE
JHX97_RS06740 1313576 .. 1313591 -  -3.2  -3.99236   GGCACAAAAAACTAA              CCCCTC CTAA AAAGGG               ACATCTAATTATTTG  55 225
JHX97_RS06735 NONE
      tet(M) 1311368 .. 1311383 -    -4  -2.88544   TTTTATTTCCACAGA              TGGG-AC ACA GTACCCA              CTCACAGTTTATAAT  46 137
JHX97_RS06725 1311178 .. 1311219 -  -4.5   -4.3277   TATACATAACAGAAA GAGTCGATAAGATGAGA TTTTGATT TCTCAAATTATCGGCTC  TGCGTCTTTGCGTCT  64 16
JHX97_RS06715 NONE
JHX97_RS06710 1309516 .. 1309574 - -11.3  -2.60309   TTTCAAAGAACAGAT GGCTTGTCAGCCTATCAAAACATACTG AAAGA CAATATGCTTTGATGGAATAACAAACC TCCCCAATCGGGAAG  83 88
JHX97_RS06705 NONE
JHX97_RS06700 1307543 .. 1307577 -  -4.4   -3.7795   TTAAATCTCATTAAA    TGCTCGCAAATCCTT ATTCTA AAGGGCTT-CGAGCA     TTTTTACTGTTGGAA  57 121
JHX97_RS06695 1307097 .. 1307110 -  -2.4  -2.71422   CATTTTCATAAATAC               GTGA AATCAA TCAC                TTTATCACAAACTGA  40 2
JHX97_RS06690 1306403 .. 1306428 -  -5.5  -4.20516   CTCTTACCGAAGAAA         GTAAAGGAG-GT CAA ACTCCCCTTCAC         TTTACATAAGGAAAA  66 66
JHX97_RS06685 1305640 .. 1305687 -  -2.3   -3.5147   TAGACATAACAAAAC CTCCAAACTTTCATAT-TCT TTTTTAAGG AGAAATATGATAACTTGGAG TCTTTCAGCTCTTAT  45 112
JHX97_RS06680 NONE
JHX97_RS06675 NONE
JHX97_RS06670 NONE
JHX97_RS06665 1299633 .. 1299657 -  -3.5   -3.6502   CATTTGTCATTTAAA          TCCCACCCTTG TGT CAAGTATTGGA          TACATATTTTTTTCA  50 64
JHX97_RS06660 NONE
JHX97_RS06655 1298742 .. 1298772 - -13.5  -5.00616   TTCCTCCTTAAAAAA       TATAAGGTTGAGC AGTTA GCCCAACCTTATA       AAACCTCACTTGGGA 100 21
JHX97_RS06650 NONE
JHX97_RS06645 NONE
JHX97_RS06640 NONE
JHX97_RS06635 NONE
JHX97_RS06630 NONE
JHX97_RS06625 NONE
JHX97_RS06620 NONE
JHX97_RS06615 NONE
JHX97_RS06610 NONE
JHX97_RS06605 NONE
JHX97_RS06600 NONE
JHX97_RS06595 1285756 .. 1285777 - -12.3  -5.43414   ATCATACACAAAAAA           CCGCCCAGA ATAA TCTGAGCGG            TTTTGTCTTATCTCG 100 53
JHX97_RS06580 1282399 .. 1282418 -   -10  -5.05782   AGTTATCGTAAAAAA            GGCTAAGC AGTT GCTCAGCC             TTAGCTTCACTTTTA 100 38
JHX97_RS06575 1280696 .. 1280721 - -10.6  -5.67711   GAAAGAAAACAAAAA         GCAAACCTAA TCTTTC TTAGGTTTGC          TTTTTTAGCATTAAT 100 36
JHX97_RS06570 NONE
JHX97_RS06565 1278556 .. 1278574 -  -8.8  -5.53436   AGACAATACAAAAAA             CCTTCCTG TAT CAGGAGGG             TTTTTCTTTTGGCCT  95 85
JHX97_RS06550 1276342 .. 1276361 -  -6.4  -4.92239   TTAAAAATCTAAAAA            TGCCAAGG AAGT CCCTGACA             TTTTTACTAAATAGT  83 42
JHX97_RS06545 NONE
JHX97_RS06540 NONE
        rplS 1274152 .. 1274168 -  -9.5  -5.01497   ACGACGACATAAAAA              GACTAGA GAC TCTAGTC              TTTTTATTCTATTAC 100 59
JHX97_RS06530 1273850 .. 1273866 -  -6.6  -5.49569   GAGTAATACAAAAAA              GCCTTT GATGT AAAGGC              TTTTTCAGTGACAAT  87 40
JHX97_RS06525 NONE
        gyrB 1270510 .. 1270542 -  -7.9  -3.33171   CTTAATAAGGACTAA      CATAGGTACTAAG GGGCGAT CTCAATACCTATG      CATTAACGCTGTCCC  67 148
        ezrA 1268545 .. 1268563 -  -8.9  -5.17507   AAAAGCTAATAAAAA             GTCGTGA GAATA TCACGAC             TTTCAAGTATCAAAA  95 35
         eno 1266361 .. 1266383 - -11.4  -5.27023   ACTGCAAAAAGAAAA           GACTTGGATA ACA TATCCAAGCC           TTCCTCAATAACTTT 100 88
        sagA 1265327 .. 1265366 -   -16  -3.29972   ATTTTACTAAACATA  TAGTAATTAGCAGGTACT GTCT AGTACCTGCTAATTACCT   GAGACGTTAGCATCA 100 174
        sagB NONE
JHX97_RS06490 NONE
JHX97_RS06485 NONE
JHX97_RS06480 NONE
JHX97_RS06475 NONE
JHX97_RS06470 NONE
JHX97_RS06465 NONE
JHX97_RS06460 1257303 .. 1257341 -  -9.1  -5.00412   AAATATAAGCAAAAA   GCAACCCTTTTATTG CATATAAGC CAATAAAAGGGCTAC   CTGGTAGTTAGCTAA 100 71
JHX97_RS06455 1253880 .. 1253893 -  -3.1  -3.43217   GTGAAAGGGAACTAA               GC-ACC AAG GGTTGC               AAAGCAACGGTTACA  48 215
JHX97_RS06450 1253264 .. 1253285 -  -4.3  -5.57729   AAACAACATAAAAAA           GAGAAGGGT ATTG ACCCAACTC            TTTTGAGTATGATGC  82 45
        ligA NONE
JHX97_RS06440 1249977 .. 1249999 -  -4.8  -5.20216   CATATGATCAAAAAA           GAGAGACC TCAAATG GGCCCCTC           ATATGAATAAATTGA  77 143
JHX97_RS06435 NONE
        atpB NONE
        atpF NONE
JHX97_RS06420 NONE
JHX97_RS06415 NONE
JHX97_RS06410 1245252 .. 1245271 -  -3.7  -2.60555   GAATCCCATAAGTCA            TTTTATC TCGATT GATAAAA             TTGAATGCTGACAAT  45 68
        atpD NONE
JHX97_RS06400 1243271 .. 1243281 -  -5.4  -3.86571   GCAAACAAAATAATA                 GGTT AAA AACC                 TTTCTTACTTATCCT  61 60
JHX97_RS06395 NONE
        murA NONE
JHX97_RS06385 1241254 .. 1241268 -   -10   -4.8667   CAGATGCTATAAAAA               GTAGGC TAG GCCTAC               TTTCCAGTAAATTTA 100 22
        pheS 1238850 .. 1238877 -    -4  -2.71364   TTAGTGCCCGAATCA        CTCGGTTAGAGA AAGC TCTCAAGCCGTG         ATTTGAGTCATTTCC  45 188
JHX97_RS06370 1236398 .. 1236416 -  -6.6  -5.84432   TATAACAGAAAAAAA             CGGAGCCT TAG AGGCCCAG             TTTTTTTCTTAGCGT  95 34
JHX97_RS06365 NONE
JHX97_RS06360 NONE
JHX97_RS06355 NONE
JHX97_RS06350 1233671 .. 1233695 -  -4.3  -5.65177   ACACTTAGAAAAAAA          CCAGACAAG TGCTGTG CTTGTTTGG          TTTTTTCTTCTAATA  85 62
        rexB NONE
        addA NONE
JHX97_RS06330 1224744 .. 1224754 -  -2.6  -3.29739   TCCAACGGATACTAA                 TAAA GTT TTTA                 TTAACCTTATTACTT  45 35
JHX97_RS06325 1224410 .. 1224430 -  -6.9   -5.8096   GATAAAAAATAAAAA            CAGTTCTAA TTG TGAGAACTG            TTTTTATTTTTTATC 100 42
        dnaG NONE
        rpoD 1220871 .. 1220903 - -14.3  -2.71497   TTATTTCAAAGGAAC      GACCTAAAATCGTCC ACT GGACGATTTTAGTCC      TCTATAAAGTCTCTT  93 19
JHX97_RS06305 1220293 .. 1220307 -  -2.8  -3.72302   TCTACATCAAAAAAG               GGAATA TTT CATCCC               TTTACTATCAATGAT  51 40
        rfbD 1219294 .. 1219317 - -11.8  -4.78764   TAAACCCATGAAAAA          GAGTTGGCCT TAGA AAGCCAACTC           TTTTTAGAATACTTA 100 38
JHX97_RS06295 NONE
JHX97_RS06290 NONE
JHX97_RS06285 NONE
JHX97_RS06280 NONE
JHX97_RS06275 NONE
JHX97_RS06270 NONE
JHX97_RS06265 1209742 .. 1209764 -  -4.3  -2.80946   AAGATTTTAAAAGAG           TATTCATTT TTTAT AAACGAATA           AGACCTTAAGAATTA  48 140
JHX97_RS06260 NONE
JHX97_RS06255 NONE
JHX97_RS06250 NONE
JHX97_RS06245 1205854 .. 1205892 - -10.6   -4.5265   AATTATAGCATAAAA   GGCTTTAAAATACTTA TTCAAGC TAAGTTTTTTAAAGCC   TCTAATTAAGAGTTT 100 39
        pepT NONE
JHX97_RS06235 1204056 .. 1204077 -  -5.1  -3.90112   TCTTGCCCAACTAAA           GCTCTTACC CTCG AGTAAGGGC            TTTTTTATCATGCTG  62 8
JHX97_RS06225 NONE
JHX97_RS06220 1202502 .. 1202525 - -13.2  -4.40526   TAGAGAAAAACGAAA          GCGGACTTGA TAAA TCAAGCCCGC           ACACATAATATTCCA 100 135
        infC NONE
        rpmI 1201686 .. 1201720 -  -2.3  -3.61774   TATAATACTCGTAAA    TGTCTACT-GCCTTTA AAAT TAAAGACCAGTAACCA     TTGCTTTGATACGTT  47 9
        rplT 1201202 .. 1201220 -  -6.7  -5.22006   TGAGTATAATAAAAA             GAAGACG TCCAT CGTCTCC             TTCATTTTTGTTTCT  85 91
JHX97_RS06195 NONE
JHX97_RS06190 1196775 .. 1196826 -  -4.9  -2.95166   TTATTTTAAAAACAT TAATCTAAAAACATCATTTCT TAACTATTGT AGAAATAATATTTTTAGACCA TTCACTAGTTAGAGA  51 30
        aroC 1195555 .. 1195567 -  -3.3  -4.52047   TATGATACCATAAAA                GCCAG TAT CTCGC                TATCTAAAATTGCTT  62 29
JHX97_RS06180 1195119 .. 1195146 -  -3.5  -5.34055   ATAAACACTAAAAAA        CAGATC-CTGAC GAGCT GCCAGCAATCTG        TTTTTTTCCTATCTT  74 48
        gorA 1193524 .. 1193569 -  -4.9   -5.4833   TCACCTAACAAAAAA CGATGCTAGCAGTT-TAGAAGA CTT TCCTCAAAAACTGTTAACATCA TTTTTTATTGCCTTA  83 52
JHX97_RS06160 NONE
        thiI NONE
JHX97_RS06150 NONE
        rplU NONE
JHX97_RS06140 NONE
        rpmA 1186601 .. 1186628 -  -8.4  -6.34616   GCAAAATAAAAAAAA        TCGGCTTTCCAG ACAC CTGGAAAGCCTT         ATATAATGCGATGTT 100 47
JHX97_RS06130 NONE
JHX97_RS06125 NONE
JHX97_RS06120 1183691 .. 1183710 - -10.8   -4.2793   ATTCAAATAAAAAGA            TCTCCTTG GAAA CAAGGAGA             TTCAGCAAAATATAG 100 367
        pyrR NONE
JHX97_RS06110 1181854 .. 1181876 -  -2.7   -3.9461   GTGGTCTAACAACAA           TTCTTCCTA TTTTT CAGGAAGTA           CCTGATATAAGATGA  53 9
JHX97_RS06105 NONE
        carA 1179511 .. 1179527 -  -4.4  -3.79849   TAATGATACCAAGAA              TACCAC AAGAA GCGGTA              AAGTCAGCACTTCTC  57 236
        carB 1176278 .. 1176303 - -10.7  -5.55698   TATAATCTAAAAAAA         TCATTTTTAAG TTTT CTTAAAAATGA          TTTTTTTAATTTTTA 100 38
JHX97_RS06090 NONE
JHX97_RS06085 1174138 .. 1174149 -  -2.2  -3.67597   CCTCCTAGTCAATAA                CAAC ACTA GCTG                 TAGTATCCGTTGTGA  47 3
JHX97_RS06080 1172685 .. 1172714 - -12.3  -2.57564   TCATTGCCTGACAAC       TTCCTAGCCGAAC CGAA GTTCAGCTAGAAA        TAAGAGATGTATCAC  86 206
JHX97_RS06075 1170861 .. 1170905 - -20.5  -2.63636   AAACAGTATAACTCA GTTTAAAGAAAGTGTCAAG TTTTTTT CTTGACACTTTCTTTAAAC CTTTAATAAAGACTA 100 28
        rpsP NONE
JHX97_RS06065 1170210 .. 1170234 - -15.9  -4.65895   TTTGCTATTCAAAAA          GCTTGTTGACT TTA AGTCAACAAGC          TTTTCAATCCATCTC 100 51
JHX97_RS06060 NONE
JHX97_RS06055 1165782 .. 1165830 - -30.1  -3.70511   AAGAGCACCTAATAA GCATACCCCTTTTTACAACATAG TCA CTATGCTGTAAAAAGGGGTATGC TTGTTTTTTAGCGTT 100 76
        rimM NONE
        trmD NONE
JHX97_RS06030 1161702 .. 1161713 -  -4.4  -2.53346   TGACAAACTGAATAT                TAGC TGTT GCTA                 CTGCTCTTGAAACTT  47 50
JHX97_RS06025 NONE
JHX97_RS06020 1159515 .. 1159546 -  -9.6  -5.58179   CAGCATAACAAAAAA      CTCAATATTAAAGC TTTA GCCATAATATTGAG       TATAACGATTTGATA 100 45
JHX97_RS06015 NONE
        pfkB NONE
JHX97_RS06005 1155696 .. 1155717 -  -8.1  -5.23316   TAGTATAGCAAAAAA           CTAGAACCT TGAC AGATTCTAG            TTTTAGTAAGAAAAA  90 54
JHX97_RS06000 NONE
JHX97_RS05995 1154098 .. 1154130 - -19.5  -4.74084   AAAGTAAAACTAAAA      GGATTTAGTTCTGTA TTG TACAGAACTAAATCC      TTTATTTAAAATAGA 100 91
JHX97_RS05970 NONE
JHX97_RS05965 1149981 .. 1150004 -  -4.6  -2.76263   CCTATCATCCAACTA          GCCCAATC TAAAGTGT GATTAGGC           TACTTGGGTTCTATC  47 97
JHX97_RS05960 1148741 .. 1148751 -  -2.4  -2.80472   CTCCACCAAAAAATG                 GCTC ATG GTGC                 TAATTCCTCTCTAAC  41 17
JHX97_RS05955 1146452 .. 1146496 - -17.4  -3.80625   GCGCCATAATGTAAA CTACACCCCAAACGTTAGAT AAAAA ATCTAACGTTTGGGGTGTTT TTGCATGACATTAAG 100 398
JHX97_RS05950 1145513 .. 1145524 -  -5.8     -2.89   ACCCTTATATAATCA                GGCA TCTT TGCC                 AAAAAACCTAAAGCG  56 60
JHX97_RS05940 NONE
JHX97_RS05935 NONE
JHX97_RS05930 1140601 .. 1140617 -  -9.4    -4.946   ATTAAACATTAAAAA              CCAGCC TCATG GGCTGG              TTAAGCATCGTTTAT 100 92
         mvk NONE
        mvaD NONE
JHX97_RS05915 NONE
JHX97_RS05910 1136399 .. 1136431 - -13.6  -3.29549   ACTAATATAAGGCAA      TCACCCATGTAAAC AATTG GTTTACATGGGTGT      TTAATCTTTGTTTCT  93 198
JHX97_RS05895 1132849 .. 1132871 -  -6.4  -3.74872   ATTTATTTTACCAAA           TTTATGAACA AAA TGCTCACAAA           AAATCTAAATAAAGT  66 41
JHX97_RS05890 NONE
JHX97_RS05885 NONE
        clpX NONE
JHX97_RS05875 1130105 .. 1130122 -  -4.1  -5.18726   TTTCGATAAGAAAAA             CACCCTC TACT GAGAATG              TTTTAGCATAGATAA  76 55
JHX97_RS05870 1129150 .. 1129167 -  -2.7   -5.1925   CCAGAAGTCAAAAAA             CTTCAGG CAAT CCTAAAA              GAAGGACAACTAGTG  75 119
        rpiA 1126046 .. 1126058 -  -4.8   -2.7555   TATATGCTAAGACTA                GCCT GCTTT AGGC                GCTTCTAAAACAGTA  50 10
JHX97_RS05855 NONE
        arsC NONE
JHX97_RS05845 1123374 .. 1123401 -    -2    -3.543   TTAGAAAAGCTAGAA        TCTGAGTTCAAC ATTC ATGGAACTCACA         CTCCGTGATTATTTT  47 127
        deoD NONE
JHX97_RS05835 1120920 .. 1120930 -  -3.2  -4.45544   CTCTAGCAACTAAAA                 GCCT ATT AAGC                 ATGGACGACTTGAGA  62 441
JHX97_RS05825 1119374 .. 1119397 - -12.4  -4.81685   ATTAAGCACCAAAAA          GCCTCGCTAC CAAA GAAGCGAGGC           TACAGCAAACTAAAA 100 231
        pyrF NONE
JHX97_RS05815 1117877 .. 1117895 -  -3.2  -4.38744   ATGTAGACAAAACAA             TCAAAACA TAA CATTTTGA             ATTGGGGTTAAAGAG  60 77
JHX97_RS05810 1116296 .. 1116316 -  -5.5  -2.80074   TGTTTTATAAGATTA            TTATTGAGG AAT CTTCAATAA            TCCTGCTGCCTCAAA  52 5
JHX97_RS05805 NONE
JHX97_RS05800 1114585 .. 1114613 -  -9.7  -4.33928   CATTTTAAATAGAAA        GACCCTGAAAATA TGA TATTTCCAGGGTT        AATATTCGTTTTTTA 100 48
JHX97_RS05795 1113843 .. 1113864 -  -2.2  -2.76492   CTATTTAGTTGAAAT           GGCTGGCT TATTTT AGCCAATC            TACGCCAGTCATGCC  40 11
JHX97_RS05790 1112404 .. 1112428 - -13.7  -4.33767   ATAAATTTACTAAAA          GCCTGACTTTC TCT GAAAGTCAAGC          TTTTTTGTTTTAACT 100 47
        parE NONE
JHX97_RS05775 1108750 .. 1108774 -  -3.6  -3.98658   ATTTTAGGAAAAAGA         GATGTCTT-CG ATAA CGTAAGCCATC          GGGAAAACTAGTCGG  57 33
        parC 1106103 .. 1106128 - -10.7  -4.49344   AAATTTACCATAAAA         TTAAAAAGAGT TTTC ACTCTTTTTAA          CGTGTTCTAGCTACC 100 22
JHX97_RS05765 1104958 .. 1104973 -    -9  -5.50313   CACAAAATCAAAAAA              GCTTGC AAGA GCAAGC               TCTATTTTAATCTAC  95 32
JHX97_RS05760 1104633 .. 1104658 -  -7.8  -3.61517   ATCTTTCCGTAACAA         CAAAAACTAT TCTATC ATAGTTTTTG          TAAGCTGGCAAGTGT  71 53
JHX97_RS05755 1104515 .. 1104530 -  -4.8  -4.52857   ATTTTTTACAGAAAA              CTAATT TTCT AATTAG               ATTAGTTTCCGAAAT  69 40
JHX97_RS05750 1104319 .. 1104334 -    -9  -4.64334   AATCCTCCAACAAAA              GCTAGC CAAT GCTAGC               TTTTGATAACAATAT  89 111
        rpsA 1103055 .. 1103084 - -15.3  -3.79995   CTAACCAGAAGACAA       TAAAAAGTTGAGG AAAA CCTCAACTTTTTA        GATTTATTACAATTC 100 32
JHX97_RS05740 1102873 .. 1102888 -  -2.6  -6.11392   AAAGAAACAAAAAAA              GCCT-AT CAA ATAAGGC              TTTTTTATATGATTT  91 41
JHX97_RS05730 1101030 .. 1101049 -  -7.2  -5.31275   CTGTATCACAAAAAA            CAAACCAG TTTC CTGATTTG             TTTTGAGATATTAGG  89 36
JHX97_RS05725 1100745 .. 1100762 -  -4.8  -2.91276   TGTTTCGCTATAAAG             GGCAAG ATAATA CCTGCC              TGTGTGACAATTTGA  51 61
JHX97_RS05720 NONE
JHX97_RS05715 1099011 .. 1099034 -  -3.1  -5.29445   CCTGAAGAAGAAAAA          GCTGCTTTC ATTGAA GAAAACCGC           AAAAAAGCTGCGCGT  76 176
        miaA NONE
        hflX NONE
JHX97_RS05695 NONE
JHX97_RS05690 NONE
JHX97_RS05685 NONE
        recJ 1091915 .. 1091934 -  -2.2  -3.82665   CATTATATCACGAAA            CATATTTT TCGT AAAATAAG             ACTTCTGACATTATG  50 95
JHX97_RS05675 1091272 .. 1091293 -  -3.1  -4.41047   ATCCCTCAATCAAAA           GGCTA-AAAT CGA ATCTATAGCC           TTTACTACTTTAAAT  60 68
JHX97_RS05670 NONE
         nth 1089907 .. 1089935 -  -7.5  -5.61596   ACCTCCATAAAAAAA        GAAAACCAAAGGC TAG GCTTTCGATTTTC        CATAAGTATCTTGAT  93 9
JHX97_RS05660 NONE
JHX97_RS05655 NONE
JHX97_RS05650 NONE
        rfbA NONE
JHX97_RS05640 1085683 .. 1085698 -  -2.6  -3.61654   CATATCCACCTCAAA              TGATTA ATCC CAATCA               TCTGAGTATGTTGTT  48 44
        rfbB 1084384 .. 1084423 -   -16  -4.39386   TTTAAACTATCAAAA  GAGCCTTGTCATATCAAC GATA ATTGATATGACAAGGTTC   TTTAATGTTTTATTT 100 35
JHX97_RS05630 1083682 .. 1083696 -  -4.2  -3.19157   TATTAAGGGCATTAA               GATAGG GTT CCTTTC               TTTGGGAAAATGATA  51 65
JHX97_RS05625 NONE
JHX97_RS05620 1081217 .. 1081254 - -13.6  -5.32565   TAAGCAACTAAAAAA   CAGCTCTCCTAGGAAA GTTATT TCCCCTAGGAGAACTG    TTTTTTTATTCTGAT 100 31
JHX97_RS05610 1078064 .. 1078082 -  -3.2  -2.63623   GTGTCTAAAATAGAG             CATTTTAA AAC TAAAAATG             ATAAAAATAACCGTT  43 140
JHX97_RS05605 NONE
JHX97_RS05600 1076190 .. 1076214 -  -2.2  -5.38497   ACGGAAATCAAAAAA          TCACTGAC TTATTATTC GTCAATGA          TTTAGATCGTTGATT  70 39
JHX97_RS05595 1074326 .. 1074353 -  -9.3  -4.19735   GTTGTTAAAATCAAA        GAAGG-TAGGCA GTTTT TGCCTAACCTTC        CTATTTTCACTAACG  89 35
JHX97_RS05590 1073443 .. 1073455 -  -6.3  -2.87051   GTTGTACTAGGAAAT                GGTTA AGA TAACC                TTTCTTCTTTTTGGT  58 15
JHX97_RS05585 1073065 .. 1073080 -  -5.4  -5.80364   ATTCTAACAAAAAAA              TGCCCT TTTG AGGACA               TTTTCAGCCTAGTTT  91 34
JHX97_RS05580 1071106 .. 1071132 -  -7.5  -4.95896   ACAAAGCGATAAAAA        TAAGC-TTAGCA AAAC TGCTAAAGCTTA         TTTTTATGTTTCTAT  88 29
JHX97_RS05575 NONE
JHX97_RS05570 1068678 .. 1068717 -  -3.7  -3.17219   GATAAGCGCCATCAA CATCCCCACCTTGC-TACG AAAA CATACGAAAGGTGAGG-TG  CCGCGACACGGGATA  49 134
JHX97_RS05565 1066955 .. 1066969 -  -7.2  -2.52464   TTTTGCGGTAAGTCA               GAAATC TTT GATTTC               GTTGACGCACCCACG  60 288
        lpdA 1065020 .. 1065059 - -16.7  -4.98522   AATGTCATACAAAAA  CACCCCAAACGTTAG GGTTTTATAT CTAACGTTTGGGGTG   CAGTTCATAGTTGTG 100 104
JHX97_RS05555 1064625 .. 1064638 -  -5.3   -2.5758   CCATATCACAAAACC               CTTTC GTAA GAAAG                ACTTAAGGATTTAGC  51 60
JHX97_RS05545 1060744 .. 1060755 -  -4.4  -3.78958   TCATCAAACAAAAAC                TCCT AAGT AGGA                 CACGATAGTTCGCTT  57 93
JHX97_RS05530 NONE
JHX97_RS05525 NONE
JHX97_RS05520 1055181 .. 1055208 -  -9.2  -4.92314   AGTAATTTATAAAAA        GAGACTTGGG CTAAACGC CCCAAGCCTC         TTTCCAATTGTTGGC 100 82
JHX97_RS05515 NONE
JHX97_RS05510 NONE
JHX97_RS05505 NONE
JHX97_RS05500 NONE
JHX97_RS05495 1051088 .. 1051108 - -10.5  -5.37593   CTGCAAACTAAAAAA            CAAGCGCTT TCA AAACGCTTG            TTTTATCATTTTTAG 100 66
        lepA 1048376 .. 1048403 -  -4.4  -3.64831   CTAATAATGAGATAA        CACTATAATATTA TTA TAACATTAT-GTG        CAAATGATTGTAAAG  55 122
JHX97_RS05480 1047023 .. 1047044 - -13.1  -5.08824   TCTTGATTCAAAAAA           GAGAGAACC TTGA GGTTCTCTC            TGAGTTTTACTTTCC 100 65
        msrB 1046363 .. 1046375 -  -6.3  -2.94218   ATTCCTTATTATAGA                CCTTT TAC AAAGG                CTTGTAAAATTGACC  58 110
JHX97_RS05470 1045280 .. 1045300 - -11.3  -5.80248   TAAGATACAAAAAAA            GAAATCAGT CAA ACTGATTTC            TCGTGTCTGATTACC 100 36
JHX97_RS05465 1044683 .. 1044702 -  -2.2  -3.32022   CCTCCTAGATATTAA            TCAAAAAA GTCA TCTTCTGA             ATTTGTCTCAGGGAC  44 2
JHX97_RS05460 NONE
JHX97_RS05455 NONE
JHX97_RS05450 1042467 .. 1042500 - -14.1   -5.0925   TCTTAAAAGGAAAAA     GGTAAGCAAAACAAG AAAA CTTGTCTTACTTACC      TTTATTGCTAGGAGA 100 44
JHX97_RS05445 NONE
JHX97_RS05440 NONE
JHX97_RS05435 1038832 .. 1038845 -  -3.9  -2.66634   TAGTCTACCAGATTA               TGAAA TCGA TTTCA                AAAAATGACTACGCT  45 82
JHX97_RS05430 1037306 .. 1037329 -  -4.8  -3.75169   TACTAGTTTATCAAA          TTTTTAAAAT TTTG ACTTTAAAAA           AGAAGAGTGTAACGC  59 86
        uvrC 1035393 .. 1035419 -  -3.8  -2.85446   CATAAACTCACTACA         CTTCGCAACTTT CTG AAAGTTTCAAAA         TAACGAACTGAAATG  46 98
JHX97_RS05420 NONE
        pepV 1033128 .. 1033150 - -16.4  -4.51097   CTAATCATCACAAAA           GAGCTGGAAC ACT GTTCCAGCTC           TTTTTGCTGTCATAA 100 46
JHX97_RS05400 NONE
        rplL 1029315 .. 1029337 -   -15  -5.50499   TGATATTCAAAAAAA           CCCGCTATTT TAA AAATAGCGGG           CTAATCAGCTTATTT 100 64
JHX97_RS05390 1027833 .. 1027864 -   -14  -4.99134   ACTGTAAACTAAAAA      GACAGTTATGAAAA AATT CTTTCATAACTGTC       TTTTTTTGATTGTTT 100 63
JHX97_RS05380 NONE
        folE NONE
        folP 1023796 .. 1023811 -  -4.7   -2.5547   AGTCCTCACATCAAC              TGGCT CAAAAC AGCCA               CAATGTCTTGATTAG  49 0
        folB NONE
        folK 1022817 .. 1022831 -  -7.1  -5.42862   ATACGCGTAAAAAAA               TCGGC ATAAA GCCGA               TACTATTATATCAAA  93 117
        murB NONE
JHX97_RS05350 NONE
JHX97_RS05345 NONE
JHX97_RS05340 NONE
JHX97_RS05335 1018039 .. 1018057 -  -7.4  -4.84527   TCGATACATTAAAAA             GGCTGG AGAAATA CCAGCC             TTTTTGAGGGCTTAT  88 37
JHX97_RS05320 NONE
JHX97_RS05315 1013058 .. 1013104 - -19.3  -3.12378   AATGATATTAGCTAA TCACAAAATAAGTAGAAGC-TA GAAA TATGCTTCTACTTATTTTGTGA TTTAAAGTATAACTT 100 59
        aphA 1010966 .. 1010993 -  -6.2  -5.15969   CTGTAACCCAAAAAA        CCCACTGGGCTA TTGG TTACTCAGTGGG         GTGATGAAAGAAATT  83 73
JHX97_RS05300 1009281 .. 1009298 -  -3.5  -3.12289   TAAAACATTCGAAGA             CTTAGTCT AAA AGAC-AAG             CTCGAACTTTCCGAA  45 58
JHX97_RS05295 1008567 .. 1008578 -    -3  -2.61997   GGCTAGATATAAGAT                TGAA TAAT TTCA                 GCTAGTTTAGCATAA  43 1
JHX97_RS05290 1007237 .. 1007258 -  -6.7    -5.626   TATTCGACAAAAAAA           CAAG-TTCCT TTT AGGAAACTTG           TTTTTTTTGAATAGC  89 14
        radC NONE
JHX97_RS05250 NONE
JHX97_RS05245 NONE
JHX97_RS05240 NONE
         pta  998183 ..  998203 -  -6.8  -5.76949   CACCTTCAAAAAAAA            CGAGATGG TCTGG CCAACTCG            TTTTTAATAATGTCA  89 107
JHX97_RS05230  997148 ..  997174 -  -7.3  -4.33819   AGTATTTAGAAGAAA        CTGGACAAGCCA TTGT TGGCTGGTCC-G         ATGTCACATCAGGCC  78 254
JHX97_RS05220 NONE
JHX97_RS05215  993825 ..  993845 -  -6.1  -5.27399   TAAGAGACGAAAAAA            TGCCAGTCC TAC GGACCAACA            TTTCTGTTTATTTCT  84 33
        guaC  992597 ..  992612 -  -6.2  -3.70149   TCCATATCATTTAAA              TGGAAT CACC ATTCCA               AATAGAATTTTTGAC  62 5
JHX97_RS05205 NONE
JHX97_RS05200  990399 ..  990413 -  -7.1  -5.39721   TGATCACAGAAAAAA               CGGCT CAATT AGCCG               TTTTTTAATTATTCA  93 34
JHX97_RS05185 NONE
        prfA NONE
        prmC NONE
JHX97_RS05170 NONE
JHX97_RS05165 NONE
JHX97_RS05160 NONE
JHX97_RS05155 NONE
JHX97_RS05150  982644 ..  982656 -  -2.7  -3.40522   ATCGTTTCATGATAA                CTTTC TAA AAAAG                GCTCATCAGTTCAAT  47 17
JHX97_RS05145 NONE
JHX97_RS05140  979165 ..  979188 -    -9  -5.28683   AGGAAGATTAAAAAA          GTTCATCTTT GTTA AAAGACGAAC           TTTATTCTATCTTTT  95 27
JHX97_RS05135  977539 ..  977563 -  -7.7  -5.54079   TTAAAAAGCAAAAAA          GCCAGTGCTGC TGA ACTGCTCTGGC          TTTTTCCTATCAGAT  93 42
        gyrA NONE
JHX97_RS05120  972989 ..  973002 -  -3.9   -3.1241   ATTATATTTAAGATA               TATCT AGGT AGATA                CTTGGTTATAAGAAT  47 15
JHX97_RS05115  972198 ..  972217 -  -6.6  -4.48175   AAAATTGAAGTAAAA            TTATCTAT CGCA ATAGATAA             AAAAACATTAATACG  76 304
JHX97_RS05110  971463 ..  971476 -  -8.1  -5.30189   CAGAAGATTAAAAAA               GTGCC TAAT GGCAC                TTTTTGTCTTATCTT  90 57
        ylqF NONE
JHX97_RS05085  967474 ..  967490 -  -5.9  -6.28401   TAAAAAAGAAAAAAA              TTCTGCT AAA AACAGAA              CTTTTTAAGGATTAG  95 30
        dprA NONE
        topA  964324 ..  964353 - -12.3   -5.1361   AGAAAGGGGAAAAAA       GCAAAAGAGGCTA TGTG TAGCCTCTTTTGT        AATCCTCATTTAATT 100 31
       trmFO  962834 ..  962863 -  -3.6  -5.30155   TCAGCAAGTAAAAAA       GTCCTCTTCAGC AACTCA ACTGAAAAGGAA        CTCTTTTTTTAGTGT  76 40
JHX97_RS05065 NONE
JHX97_RS05060 NONE
JHX97_RS05055 NONE
JHX97_RS05050  959404 ..  959426 -  -6.3  -5.14563   CTTTCTACTAAAAAA           GGAGCTAGA TTGCT TCCAACTCC           TGATAATGATTTATT  84 70
JHX97_RS05030 NONE
JHX97_RS05025 NONE
JHX97_RS05020  953944 ..  953965 -  -2.2  -4.46073   GCCTAACACAATAAA           GACACCTG CCATAC CAAGCGCC            ATTAGCTCAAAGGAA  59 87
        citD NONE
        citE NONE
        citF NONE
        citX NONE
JHX97_RS04995  949041 ..  949067 - -12.5  -5.49569   TACTAAGATAAAAAA         CCTATCTGATT ATCAA AATCAGATAGG         TTTTTGGTATTGTTC 100 99
JHX97_RS04975  944349 ..  944378 - -10.9   -4.9251   AAGAAAAAACGAAAA       TAAAAGAGACGAA AATT TTCGTCTCTTTTT        GATGTGAAATTCATT 100 115
        guaA  938347 ..  938398 - -17.8  -3.85786   ACGAAAACAGTTAAA GAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTC TGTTATTCCCATTCA 100 28
JHX97_RS04925  931887 ..  931914 - -14.4  -3.62591   GGGATAAGGTTTAAA        TACCTAACAGAT AAAA ATCTGTTAGGTA         TTTTTTTGCTACTAT 100 425
        coaB NONE
        coaC NONE
JHX97_RS04860  919454 ..  919486 -  -8.7  -4.42851   GTAAGAAAGTTAAAA      TAACCAAGTTTTT AAAAGAG AAAAACTCGGTTA      TTGTGAAAGCTAATT  89 39
JHX97_RS04855  917540 ..  917562 -  -9.2  -4.88711   AGAATAGACTAAAAA           GAACTAAGTC AGC GGCTTAGTTC           TTTTTGCTTGTCTTT 100 69
JHX97_RS04820  909689 ..  909704 -  -2.6  -3.26596   TCCAAATTAATCTAA              CTACAT TATT ATATAG               AAAATATATGCGTTT  45 53
JHX97_RS04815  909401 ..  909412 -  -5.8    -5.626   TATCGTATAAAAAAA                CTCC AGCT GGAG                 TTTTCATTGGATATT  88 43
JHX97_RS04710  887076 ..  887096 -  -9.8  -3.52111   CGAAAAGGATTATAA            GTTTGAGG GCCCA CCTCAAAC            TTTTTTTGTTGCTGT  81 147
JHX97_RS04665  879290 ..  879310 -  -3.2   -5.4505   GGGCTTAAGAAAAAA            GCCTAGCT TCTTG AACTTGGC            AGAAGAAGACTAGGT  77 67
JHX97_RS04660  877872 ..  877905 -  -6.1  -5.42259   GTATTCTTAAAAAAA     TCCCTATGATCTGTT TAAA AACAAATTGTAGGGA      TTTTTTTAACTATTT  86 117
JHX97_RS04605 NONE
JHX97_RS04600 NONE
JHX97_RS04595  863083 ..  863122 - -13.3  -5.52909   GAACACTGAAAAAAA  CTTTCTTTTAAACTATA GTGTGT CATAGTTTAAAAGAAAG   TCTTAACGCTTACTG 100 35
        ssrA  861903 ..  861918 -  -4.7  -5.98675   GACAAAAAGAAAAAA              CCTTG ATGTAA CAAGG               TTTTAGTAAGTTATG  93 59
JHX97_RS04580  860973 ..  861002 - -13.1  -5.07941   AAAATGATATAAAAA       GATTGATTTCGAT GTAC ACCGAAATCAATC        TTTTTAGCAAAATAT 100 53
JHX97_RS04560  854150 ..  854205 -   -13  -3.78775   CTTGTTAGGATGAAA TAGCTAAGTGTTACGTAAACTTTTAA AGAG TTAAAAATTTAAGTAGCACTAAGCTA CTAGTAAAACAAAAA  95 177
JHX97_RS04555 NONE
JHX97_RS04550  851843 ..  851869 -  -9.5   -4.7497   CTTATTTATCAAAAA         CCTCCTAAAGG GCTTG CCCTTAGAAGG         TTTGGTATGTTGTAA 100 42
JHX97_RS04545  850464 ..  850511 - -15.8  -4.70659   TTTGATATTCAAAAA GCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGC TTTTGTTTTATTTAC 100 233
JHX97_RS04505 NONE
JHX97_RS04500  839323 ..  839346 -  -9.6  -5.31059   ACAGTAACCAAAAAA          GGCAAGGAGA TAGG TTTCCTTGCC           TTATTATTTTTTGGA 100 63
JHX97_RS04455  830872 ..  830894 -  -9.2  -4.92239   TGAAAAATTGAAAAA           GGATGAGG CTTAGGC CCTCATCC           TTTTTTGACCTTTTT 100 20
JHX97_RS04435  827483 ..  827497 -  -2.9  -3.25088   CGCCAAATCCATGAA               GAAAA TTTTG TTTTC               AGAAATCACGATTCA  45 106
JHX97_RS04425  824872 ..  824889 -  -4.9  -3.23276   AGTTAGACAATAAAT             CTAACTT AAGG AAGCTAG              CAGCATGAGAATCCA  54 8
JHX97_RS04420  824493 ..  824509 -  -3.7  -3.85817   ATTTTCCTTCAGAAA              CTGAAAT TTT ATTTCCG              GTTTGGCTTCAAGAA  55 17
JHX97_RS04415  824100 ..  824116 -  -2.9  -2.56596   TTGTGTAGGAATGTA              GGTTAAG TCT CCTAGCC              ATAATTTATTCTTAC  41 81
JHX97_RS04410  823640 ..  823650 -  -5.4  -4.30844   ATGGGACCATTAAAA                 CTAG ACC CTAG                 CCTTGCAGAAGGGGA  67 274
JHX97_RS04400  822471 ..  822495 -  -7.2  -4.96646   TGAGATAAGCAAAAA          GGTAAGCACT TAGGG ATTGCTTACC          TTTTTGGTTCTTTTC  88 48
JHX97_RS04390  819294 ..  819312 - -14.6  -4.05389   GAGAGATACCATAAA             CCACCCGT TAG ACGGGTGG             TTACGGTTTATTTAC 100 33
JHX97_RS04315  800979 ..  801000 - -10.2  -3.77906   AACTGAAATACATAA           GGGTAAGG TTTTGC CCTTACCC            ACGTTTTATCTCGTT  87 262
JHX97_RS04295  797828 ..  797852 -  -2.2  -3.08464   GTATTATTTAGTCAA          GGCTCTTTTA TAGTT TAAAAAAGCA          CATCATCGTCAAGGG  42 15
JHX97_RS04280  795566 ..  795595 - -15.3  -3.89614   AATTGATATACTAAA       CAATCCAATTACT TTGA AGTAATTGGATTG        TTGTTTTTAGTAGCC 100 67
JHX97_RS04255 NONE
        nrdE  787476 ..  787503 -  -8.5  -4.07868   GGATATCGAGATAAA        CCAGTAGAACC GACCAA AGTTCTACCGG         TAATAATAAGTTTAA  82 277
        nrdF NONE
JHX97_RS04240  784857 ..  784883 - -14.5  -3.23395   ATTGAGCATGACGAA         GTGCGCTCCCA TGTCC TGGGAACGCAC         TTTCTCCATATTTTT  95 317
        queA  769367 ..  769383 -  -3.7  -4.56597   TCTTTCTGCCAAAAA              CTGAC GCAAAAA GTCAG              AAACATCAAGAAGAA  65 71
JHX97_RS04125 NONE
JHX97_RS04120  760069 ..  760093 -  -7.3  -5.71983   TGAAGCATAAAAAAA          TCATTGAGA TGATAAG TCTCAATGA          TTTTTCTTTTCTTTT  93 19
JHX97_RS04060  745167 ..  745200 - -12.7  -4.62069   TTCCCATTTTAAAAA     GCTTGGAAAGTGTACA AAG TGCACA-TTTCCAAGC     TTTTTTGACTATTAA 100 43
JHX97_RS03785 NONE
JHX97_RS03780  708002 ..  708043 -    -7  -2.78032   TTTCTGTTAAAATAG GTATAGTAAAGAGACCTACT GCGA AGCAGGT-T-TTTACTATAC TAGATTCGCCTCACG  62 76
JHX97_RS03775  706753 ..  706789 -  -3.7  -4.61199   ATTGCATAGATAAAA   GCCCATTGTATCAAGC GTTACA GCCTG-TGCAGTGGGC    TTTTTTGTGTTCAGG  65 64
JHX97_RS03705  693091 ..  693116 -  -6.9  -3.49102   ACACGTTCCAGAGAA         GTATCT-CCACG AAC CGTGGAAGATGC         CAAAATACCTTCAAG  66 169
JHX97_RS03680  687302 ..  687325 -  -8.2  -4.11744   ATTGATAGAAAAAGA          GAGAGTCTCC TTAT AGAAACTCTC           TTAGCTAACGTTAAT  81 36
JHX97_RS03675 NONE
JHX97_RS03670  686351 ..  686374 -  -8.2   -5.4505   TTCGCTAATAAAAAA          CTTAGCTCTT TTAG AAGGGCTAAG           TTTTGTCTGAATAGC  93 51
JHX97_RS03580  667535 ..  667547 -  -4.1  -4.57073   TATCTGGCCTAAAAA                TGCTC TAG AAGCA                CAATCCAAAATAATC  67 6
JHX97_RS03505  651945 ..  651988 -  -7.6   -5.4756   AAGGTTAACAAAAAA GCGAGTAAACGAATGTCCT GTCATTT AGGTT-TTCGTTTACTCGC TTTTTGATGAGATTT  93 105
JHX97_RS03455  641209 ..  641220 -  -2.2  -5.00884   ATGGTCGGCAAAAAA                CTCG GAAA CGAA                 CGCTTCGTAGCCAAC  69 365
JHX97_RS03425  636582 ..  636609 -  -9.3  -5.64274   CTAGCTATAAAAAAA        TACTGCCCTAA ATCTTA TTAGGACAGTA         TTTTTTATAGATGCC 100 33
JHX97_RS03420 NONE
JHX97_RS03415  634108 ..  634130 -  -9.2  -4.68645   TATGGAAAAGCAAAA           GAGAAGGTGA CGC TCATCTTCTC           TTTTTACGTATTCAA 100 394
JHX97_RS03355  619214 ..  619224 -  -5.4   -3.2827   GTAGCTAATCAGCAA                 TCCT TTT AGGA                 TGTCTTTGTAGATGT  55 91
JHX97_RS03335 NONE
JHX97_RS03330  610225 ..  610250 - -14.1  -3.28783   TCAAAATCAACTTAA         GAGTCTGAGAC AATA GTCCCAGACTC          TTTTTGAATATGTTA  95 63
        sda3  605319 ..  605359 - -10.8  -4.06491   TTAACTTTATACAAA  TTACCCCAAATATTAAAT AAATA ATCTAACATTTGGGATAA  TGTTCACAATCTAGA  93 66
JHX97_RS03305  604653 ..  604674 -  -7.2  -3.54768   TAAATAAAAAGCCAA           CCGCTCTC TTGATT GAGGGCGG            TTTTTTGTGTTATAA  68 45
JHX97_RS03165 NONE
JHX97_RS03160  580461 ..  580478 -  -7.7   -5.1101   TTATTATGTAAAAAA             GAACCAC AACA GTGGCTC              TTATGCTTGTAATTT  88 26
JHX97_RS03040  569103 ..  569127 - -11.5  -4.72863   GTAAAGAAACTAAAA          GAAGCCCATCC AAA GGATAGACTTC          AATTCAATGTAAACA 100 57
JHX97_RS03025  566984 ..  567001 - -11.3  -3.41745   TGGTGACAATATCAA             GAGGGCT AAGA AGCCCTC              TCCCCTAACGGGGTA  89 351
JHX97_RS03015 NONE
JHX97_RS03010  565366 ..  565376 -  -3.2  -4.57569   TTACCGCCTGAAAAA                 CCTG CAT CAGA                 GTAGTTTTTGTAAAT  62 280
JHX97_RS02965  553467 ..  553511 - -14.6  -4.90381   TTCAAGAGAAGAAAA GCACCCCAAAAGTTAGAT GTTTGATGT ATCTAACTTTTGGGGTGT CATTCAAAATTTAGT 100 111
JHX97_RS02915 NONE
JHX97_RS02910 NONE
JHX97_RS02905  542065 ..  542080 -  -4.8  -4.15222   AGTGCTTGTAACAAA              TTGATA TCCA TATCAA               TCTCCTTTATTCATT  64 39
JHX97_RS02900 NONE
JHX97_RS02895  540424 ..  540475 -  -6.7  -5.07652   CTTTCCAAAAGAAAA GAGACCTCATCATGTGCTTAGGAA CTATT TCCCTATGCTCATAAC-AGGCCTC TGTGAACCATTAAGC  84 35
JHX97_RS02890 NONE
JHX97_RS02885  537361 ..  537384 -  -9.7  -4.19472   TAATAGACGCTAAAA          GGTTTGAGA TAATTG TCTCAAACC           TTTTTTTATAATCGT  93 73
JHX97_RS02870  532370 ..  532397 - -14.4  -4.90266   TGTAGTAACTAAAAA        GATTGAAGAAAG TACT CTTTCTTCAATC         TTAGAATGGAGGCAA 100 296
        yidA NONE
JHX97_RS02860 NONE
JHX97_RS02855  528857 ..  528902 -   -18  -3.34013   GATTTCCTTAACTAA GTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGGC TTAACTCTTAATATG 100 78
        pepF NONE
JHX97_RS02825  519597 ..  519638 - -22.1   -2.8742   TTTAAATAGTAACTA TAATACAAAATAGACTTGG CACG CCAAGTCTATTTTGTATTA  ACCAAGAAGTGCTTT 100 23
JHX97_RS02810  517285 ..  517306 -  -8.1  -5.36441   TGGTGACATAAAAAA           CTCCTTTTG TGCA CAAAAAGAG            TATCGCTTTCCAATC  90 266
        thiT  516659 ..  516682 -  -7.6  -5.88197   CTAAACATAAAAAAA          TGGTATAACA ACAT TATTATACCA           TTTTTTTAATGTAAG 100 58
JHX97_RS02800  516086 ..  516098 -  -2.7  -4.57787   ATAATACTAAACAAA                GACTA GCT TAATC                AAGGCGAAAACTTAA  60 72
JHX97_RS02795  514842 ..  514870 -  -3.2  -3.35679   TGTGGCTATTGATAA       CTTTGAACAGCTC TTTG GTGCCGTT-AAAG        TACTCTTTGATTTAC  48 337
        lysS  512406 ..  512431 - -14.9  -4.16842   GCTACTGTTAATAAA         CCAGTCTTCAT GGTA ATGAAGACTGG          TTAGAGATAATAAAA 100 98
JHX97_RS02780  511858 ..  511882 -  -6.6  -5.64274   TGAGTCATAAAAAAA          GTGAAAAAAA GATGA TTTTTTCCAC          TTTAATTTCGAATAG  89 371
JHX97_RS02760  508620 ..  508634 -    -5  -5.00616   CTTTCGTGCAAAAAA               CAAAAG AAA CCTTTG               CCGAAGTTGAAGCGA  77 303
JHX97_RS02720  502433 ..  502459 - -10.3  -2.91099   TAGATGATAAAAGAG        GAGGCTGAAACA CGAA TGTT-CAGCCTC         GACTGATACGTTTTG  79 116
JHX97_RS02715 NONE
JHX97_RS02710  500644 ..  500670 -  -6.7  -4.89729   GATAAAACTCAAAAA         GCATTTGTTTT GATAA AAAACAAGTGC         TTTTTTATTAGTCTT  83 40
JHX97_RS02690  494698 ..  494725 -   -15  -4.90906   TTATAACAGCAAAAA        CCAGTCTCGTTC AATA AAACGAGACTGG         TTTTTAGTATGTCAT 100 42
JHX97_RS02670  489841 ..  489873 -  -8.7  -5.14563   GTCTCTACTAAAAAA     TACTCCGTCTTCTA TGAAAC TAGAA-ACGGAGTA      TTTCTGTTTGTCTAT  95 234
JHX97_RS02600 NONE
JHX97_RS02595  481360 ..  481405 -  -6.4  -3.07005   AATCAATGGCTAATA GTGAGGA-GGATTT-GCCGATA GAGT TATCAGCTAAATCCATCCCCAT AATCACGTTTAACCC  59 103
JHX97_RS02585 NONE
JHX97_RS02580  479582 ..  479623 -  -9.6  -3.03151   TTTTTCAAAGTAAAG GCACTAAGTTGATCTGAC TTACAC ATCTTATCAACTTAGTGC  TTTTTTTATTTCTAG  77 37
        rgg3  468509 ..  468534 -   -12  -4.60949   TAGAGTACAAAGAAA         GCCTTGGAAA TAGCAG TTTCCAAGGC          TTTTTAGCTGTCGAT 100 130
        dhaS NONE
        dhaQ  452158 ..  452182 -  -4.2  -3.49135   TAGATAATGAAGGAA          GGCAGCTGTT GTAAA AATGGCTGCC          TTTTTTGTGATGGTT  53 40
JHX97_RS02410 NONE
JHX97_RS02405 NONE
JHX97_RS02400  441126 ..  441151 - -14.9  -5.42198   GGTTAAAAAATAAAA         CAACAGAAGCT TTAA AGCTTCTGTTG          TTAATAGTATTAGTT 100 35
JHX97_RS02395 NONE
JHX97_RS02390 NONE
JHX97_RS02385 NONE
         pcp  437521 ..  437541 -    -4   -5.9873   TTAGCACAAAAAAAA            CAGAGTTA GTTCA TATCTCTG            TTTTTTTTAAATAGG  93 57
        shp2 NONE
JHX97_RS02320  426946 ..  426957 -  -2.2  -4.18197   AGCTGGTAGTTAAAA                TAGC ATTA GCCA                 AGTGGTTGTACTGGC  54 338
        stcA  426565 ..  426589 - -15.1  -5.06451   GATTAGCTTAAAAAA          GAACACTACCG AAA CGGTAGTGTCC          ACTGATTTTAGGAGA 100 42
JHX97_RS02185  406924 ..  406966 -   -18  -3.02698   GTATTGCAGACAAAC TAAAAGAACCTGACGTCTCA TGA TGAGATGTCAGGTTCTTTTT TTGTGATGTCAGGCC 100 55
JHX97_RS02175  403452 ..  403464 -  -4.1  -3.79623   AAAAACCTTATCAAA                CCAAG GTA CTTAG                CCTATTATCTGATAA  57 59
JHX97_RS02155  399922 ..  399959 - -24.5  -5.40474   AGCCCCTCAAAAAAA   GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC    TTTTTGAGGAGACGC 100 47
JHX97_RS02105  391721 ..  391761 -   -12  -2.75064   CTTTGCACGCAATCA  GCAGCACAAAAAGCACCC CTGAC AGGTGCTTTTTGTGCTTT  AGCCAACCTCATAGC  84 52
JHX97_RS02090  389530 ..  389542 -  -4.8  -5.81032   GAACCTCAAAAAAAA                GGAC ATGGA GTCC                TTTTTTTGGTGATCG  91 53
         xth  373996 ..  374024 - -10.3  -5.07107   CAAAGTCTCAAAAAA        GGACAAGGCAACA TTA TAACGCCTTGTCC        TTTTTTGGGATCTGT 100 50
JHX97_RS02040  372653 ..  372679 -  -6.7  -5.50925   AACTAAGAGAAAAAA         GACCATCAA TTGGATTTG TTGATGGTC         TTTTAGGTGTTTAAA  87 36
JHX97_RS01985  362959 ..  362972 -  -6.7  -5.40625   ATAGCATAGAAAAAA               GGCTT AACA AAGCC                TTTTTTGATGTGATT  87 125
JHX97_RS01980  362052 ..  362065 -  -6.7  -3.12847   AATAAAGTTATTGAA               GCTGA TAAG TCAGC                ACTATAGGACAGTTG  59 4
JHX97_RS01975 NONE
JHX97_RS01970 NONE
JHX97_RS01965  359008 ..  359032 -  -7.9  -5.39721   GCACCATAGAAAAAA          GCTAGGAACAA GGA CTGTTCTTAGC          TTTTTGAGTGCTTTT  93 39
JHX97_RS01850  341832 ..  341848 -  -2.3  -3.85817   AGTTTTTTTCAGAAA              TTCACAA TAG TTCTGAA              GGCCGATTTTTAATT  50 35
        yidC  340406 ..  340429 -  -3.1  -5.17488   AATACCAAAAGAAAA          GACCAGCAC CTTAAT GTACTGACC           CCAAAAAGTTGGACA  71 449
        rsmG  322178 ..  322195 -  -5.6  -5.23016   AAATAAGTTAAAAAA             GCTAAG TTTCAT CTTAGC              CTTTGGTACTATTTT  82 39
JHX97_RS01760 NONE
JHX97_RS01755  320032 ..  320055 - -11.1  -5.64304   TAACATAATAAAAAA          CATCCTTGG AAAACG CCAAGGATG           TTTTTTTATTATTTA 100 34
        brnQ  317131 ..  317168 - -10.2  -4.57482   TTAGTCATAAATAAA  CGAAACAACACCCTAAGT TTTT ACTTAGGGTGTTGTT--G   TTTAGATGATGTCAT 100 27
JHX97_RS01640  298769 ..  298785 -  -3.7  -3.85817   ATTTTCCTTCAGAAA              CTGAAAT TTT ATTTCCG              GTTTGGCTTCAAGAA  55 17
JHX97_RS01635  298327 ..  298340 -  -3.1  -3.96148   TCTTTCTACTATAAA               CGTCT ATCA AGACA                GACACATAAAGTATT  55 133
JHX97_RS01625 NONE
JHX97_RS01620  297374 ..  297391 -  -3.5  -4.06055   ATGGTTGAAATCAAA             CCAAATCA CTT TG-TTTGG             GCAAACCAAGCAGAA  56 105
JHX97_RS01590  289363 ..  289386 -  -6.8  -5.24003   AATAAAAATGAAAAA          GACTG-CAGAA GTA CTCTGTCAGTC          AATGTCATACAAAAA  85 54
JHX97_RS01585  288023 ..  288060 - -17.4  -3.42884   ACACGTAAGATAACA   TATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATA    ATTCATTATTGGCGT 100 31
JHX97_RS01535 NONE
JHX97_RS01530  275083 ..  275111 -  -2.5  -5.15969   TTTGAATTGAAAAAA        GACCCAACT GGCATAGAAAT AGTTGGATC        CTTTATCTTATTTTA  69 33
JHX97_RS01525  274791 ..  274817 -  -3.8  -4.98522   AACTGTATACAAAAA         GGCTAAGA TGGAAGGGGTG TCTTAGCC         TTTTTTTGTCTGACT  70 69
JHX97_RS01450  257614 ..  257660 -  -7.4  -4.58663   ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT  82 8
JHX97_RS01330 NONE
        galU  231554 ..  231609 - -18.8  -2.98761   AGTAGGATGAAACGA CTCAAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTT-GTT TTCTCTAGTGCTTTG 100 13
JHX97_RS01315  228397 ..  228444 - -18.1  -4.43309   CAAGGTTAAGTAAAA GCGATAATAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTATTAT-GC CAAATTTCAGATAAG 100 212
JHX97_RS01300  224681 ..  224695 -  -2.9  -5.03405   AACAGGACATAAAAA               GTTTT AAATG AAAAC               AAACATTTTGACAAT  69 14
JHX97_RS01290  222569 ..  222595 -  -3.6  -4.72127   ATAGAATATACAAAA         GGGCGTTTCCAA GTA CTAGAAGCGCTC         TTTTTCAGACCCAAT  67 486
JHX97_RS01260  217625 ..  217652 -  -8.6  -3.61268   GAGTTAACCCTTAAA        TAAAGGCATTAT AAAT ATAGTGCCTTTA         CAAATCAAAAACCCC  77 86
JHX97_RS01180  197237 ..  197265 -  -2.4   -3.2672   ATCTGAATAAGAAAT        GTGGCGACCT AGGATTAGA AAACCGCCAC        GAGATGGTTTTTTAT  44 77
JHX97_RS01175  196883 ..  196910 -   -20  -4.88407   TTAGCCAATCAAAAA        GCCTAAGGCTGC ATAA GCAGCCTTAGGC         TTTTCATAACCGTAG 100 80
JHX97_RS01170  196270 ..  196300 - -12.8  -5.51046   CAAATACAGAAAAAA       GCTTGTCTATGA GATACCT TCATAGACAAGC       TTTGTTATAACTGTT 100 47
JHX97_RS01135 NONE
JHX97_RS01130  186191 ..  186228 -  -6.5   -5.2189   TTAAGTAGTAAAAAA  GCAAGCCATCAA--AGG GATTAA CCTAACTGATGGCTTGC   TTTTTAAGTAGCGTG  85 57
JHX97_RS01070  174148 ..  174161 -  -2.3  -4.45577   AGAAATTGCAGAAAA               TGGAG ATAT CGCCA                ATTACCTGATTCCAG  59 440
JHX97_RS01050  170866 ..  170890 -  -2.9  -3.90574   AATAACTACATGAAA         CGCCTG--GGA TTGTT TCCTTCAGGCG         TTTTTTTTAAGGTCT  53 52
JHX97_RS01040  168353 ..  168382 - -10.2  -5.24416   CAAGTATAATAAAAA       GAGTCTGAG-CAA TCATG TTGTCTCAGACTC       TGACTGTAATTATGC 100 67
JHX97_RS01030  163587 ..  163601 -  -2.1  -3.66356   ACTTTTAAGCCCAAA               CGGTT AGTAA AACCA               ATACCGCCTAGACAA  49 326
JHX97_RS01000 NONE
        hslO NONE
        dusB NONE
JHX97_RS00985  154378 ..  154390 -  -6.3  -3.31461   GATTTAGTCTTAGAA                GAAGA TAC TCTTC                CCTTTTGATAGGGGA  61 293
        pepA NONE
JHX97_RS00955 NONE
JHX97_RS00880  131464 ..  131488 - -10.1  -5.29445   TTTTAATAAGAAAAA          TCCTCACATGT TTA ATATGTGAGGA          TTTATTTATAAATGC 100 464
JHX97_RS00540   85428 ..   85448 -  -6.2  -5.84381   GCATTAATAAAAAAA            TGTGGTCT AATTA AAACCACA            TTTTTTTATTAAAAG  93 55
JHX97_RS00490   72588 ..   72610 -  -9.1  -4.07772   GAAATAAAAAACCAA           CCGCTCAGA TTATT TCTGGGCGG           TTTTTTTGTGTCTAA  85 56
JHX97_RS00270 NONE
JHX97_RS00265 NONE
JHX97_RS00260 NONE
JHX97_RS00255   34245 ..   34260 -  -3.2  -2.94365   TCACACCTTAGAAAT              CCCTTG AAAT CAATGG               GTTTCTAAATCCAAA  44 75
