JCR30_RS00015    3056 ..    3068 +  -4.1   -3.6053   ACAATGACGAAAGTT                GTAGC ACA GTTAC                TTAGTTTCTCGGCAA  55 162
        ychF    4387 ..    4407 +  -7.6  -3.16106   AAAACAATATCAGAA            GGTTGGAA GAACA TTCCAGCC            CTTTTGGCATTTTAG  67 48
JCR30_RS00025 NONE
         mfd NONE
JCR30_RS00035 NONE
JCR30_RS00040 NONE
JCR30_RS00045 NONE
        tilS NONE
         hpt NONE
        ftsH   14563 ..   14587 + -11.6  -5.24129   GAATGATATAAAAAA          GCTGAACTTA TAGAT TAAGTTCAGC          TTTTTTATAAACACA 100 35
JCR30_RS00065   16385 ..   16413 + -11.8  -3.34013   TTTAAAATTACCCAA        CCCCTAGAGAAT TGATT AGTCTCTAGGGG        TTGATTGGCACAATG  90 140
JCR30_RS00070   18428 ..   18441 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JCR30_RS00075   18582 ..   18614 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JCR30_RS00080 NONE
         rrf NONE
JCR30_RS00090 NONE
JCR30_RS00095 NONE
JCR30_RS00100 NONE
JCR30_RS00105 NONE
JCR30_RS00110 NONE
JCR30_RS00115 NONE
JCR30_RS00120 NONE
JCR30_RS00125 NONE
JCR30_RS00130   22688 ..   22702 +  -4.2  -3.06261   GGGACCAAGGTGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATTAGAA  50 1
JCR30_RS00135   24429 ..   24442 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JCR30_RS00140   24583 ..   24615 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JCR30_RS00145 NONE
         rrf NONE
JCR30_RS00155 NONE
JCR30_RS00160 NONE
JCR30_RS00165 NONE
JCR30_RS00170 NONE
JCR30_RS00175 NONE
JCR30_RS00180 NONE
JCR30_RS00185 NONE
JCR30_RS00190 NONE
JCR30_RS00195   28689 ..   28703 +  -4.2  -3.06737   GGGACCAAGGTGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATTAATG  50 1
JCR30_RS00200 NONE
JCR30_RS00205 NONE
JCR30_RS00210 NONE
JCR30_RS00215   29081 ..   29094 +  -3.9   -2.8082   ATCCTGCTCCCGCAA               TACAT AAGT ATGTA                GTTGTTGGCTCGGTA  46 25
JCR30_RS00220 NONE
JCR30_RS00225   29288 ..   29306 +  -4.5  -2.70932   CTATATCAATAAAAG             CTTGGGC GCGTA GCTCAGG             TGGTTAGAGCGCACG  47 53
JCR30_RS00230   29342 ..   29363 +  -2.1  -2.50821   TAAGCGTGAGGTCGG           TGGTTCGAG TCCA CTCGTGCCC            ATATATATTTGGAGA  39 2
JCR30_RS00235   29516 ..   29528 +  -5.5  -5.70829   TATTAGGGGAAAGAA                GACGG TTA TCGTC                TTTTTTTGTAATCTT  86 80
JCR30_RS00240   32034 ..   32055 + -11.7  -5.00339   CTAACATATTATTTA           GGTTAGAAC AGTT GTTCTAACC            TTTTTGATTATTCCT 100 37
JCR30_RS00245   33248 ..   33270 +  -9.9  -4.75174   ATTAAGCTTAACGAA           GCCTGAGAT AATAG ATCTCGGGC           TTTTTGACTTGAATA 100 36
        recO   34477 ..   34494 +  -4.9  -5.82316   ATGCGTGAGTATGTC             TAAATCC ATGA GGGTTTA              TTTTTTTTAGATGAT 100 324
JCR30_RS00275 NONE
JCR30_RS00280 NONE
JCR30_RS00285 NONE
JCR30_RS00290 NONE
JCR30_RS00300 NONE
JCR30_RS00305 NONE
JCR30_RS00310 NONE
JCR30_RS00315 NONE
JCR30_RS00320   41560 ..   41582 +  -9.9  -3.33744   CGATATTTTATAGCA          GAGG-GCCTC TTTA GAGGCTCCTC           ATTTTTAAAGGAGAG  81 28
JCR30_RS00325 NONE
JCR30_RS00330   45943 ..   45955 +  -2.7  -3.13164   GGTTGAGTTGTGATT                TCAAA AAT TTTGG                TTACGTAGTTACGCA  43 57
JCR30_RS00335 NONE
JCR30_RS00340 NONE
JCR30_RS00345 NONE
JCR30_RS00350   48361 ..   48387 +  -4.4  -3.53012   GACTTGATGTGGATG         TGTTCTGGTGGA AAA TCCAGTCGAACA         TTTAAAGCGGAGAGG  55 79
JCR30_RS00355   48915 ..   48937 +  -6.3  -4.84274   TAGTATGAGTTTGAA           GGTAAGGCA GATAG TGTCTTGCC           TTTTTGCTATGCTTG  83 84
JCR30_RS00360 NONE
JCR30_RS00365 NONE
JCR30_RS00370 NONE
JCR30_RS00375 NONE
JCR30_RS00380 NONE
JCR30_RS00385   54154 ..   54169 +  -5.4  -5.24796   CAAATCTAAACCAAA              GTCGTA GCAA TACGGC               TTTTTATTGTGTCCA  82 71
JCR30_RS00390 NONE
JCR30_RS00395   55721 ..   55734 +  -4.5  -3.27298   AACAATCGAAGCTGC               TGCTG TACC CGGCA                TTGGTGGTTAAAGGC  51 1
JCR30_RS00400 NONE
JCR30_RS00405 NONE
JCR30_RS00410 NONE
JCR30_RS00415 NONE
JCR30_RS00420   57723 ..   57744 +  -2.1  -4.54727   CACTAAATAGCACAC           AGGGGTGGC AACT GATACCCCA            TTTTGATTTAAAAAG  59 31
JCR30_RS00425 NONE
JCR30_RS00430 NONE
JCR30_RS00435 NONE
JCR30_RS00440 NONE
JCR30_RS00445 NONE
JCR30_RS00450 NONE
JCR30_RS00455 NONE
JCR30_RS00460 NONE
JCR30_RS00465 NONE
JCR30_RS00470 NONE
JCR30_RS00475 NONE
JCR30_RS00480   71756 ..   71777 +  -9.4  -5.10064   TTAGATAAGACAAAA           CCGCTCTC TTAATC GAGGGCGG            TTTTTGTGTCTTAAA 100 91
JCR30_RS00485   72588 ..   72610 + -11.3  -5.76633   GAAATAAAAAACCAA           CCGCTCAGA TTATT TCTGGGCGG           TTTTTTTGTGTCTAA 100 86
JCR30_RS00495 NONE
        plsX NONE
JCR30_RS00505   75527 ..   75562 +   -18  -3.53091   CGTTTGACTTAGTTA    GAATAATAAAAAGAGC GTAA GCTCTTTTTATTATTC     TTTAAAAACGAACCT 100 29
JCR30_RS00515   80359 ..   80369 +    -4  -4.43012   TTGAAAATAGCTTGA                 TAGA TTT TCTA                 TTTTGATGTTGGCAT  62 156
JCR30_RS00520 NONE
JCR30_RS00525   83087 ..   83097 +    -4  -4.56597   GTTCGTTTTCCTATT                 TTTC TAC GAAA                 TTTTTCGGCAAGCCG  65 146
        purN   84081 ..   84107 +  -8.6  -3.01791   CCTCCATCCAAACAT         TCACGGTGGGCT TTT GGCCCGTCGCGA         TGTTGACAGCCACCT  71 418
        purD   88349 ..   88361 +  -4.9  -4.08767   GGACTTACCGCATAT                TTTTC TAC GAAAA                TTTTCGACAAATCGA  64 254
        purE NONE
        purK NONE
JCR30_RS00560 NONE
        purB   92693 ..   92708 +  -4.7  -5.63517   TTAATATAAAAAAAA              GAAGG TGATTC CCTTC               TTTTTTATTTAAAAA  86 37
JCR30_RS00570   93734 ..   93751 +  -4.9  -4.73432   TTTAAATAATAATTT             TATGACA TGGA TGTCATG              TTTATTTATATTTAC  72 36
JCR30_RS00575   93939 ..   93952 +  -3.9  -4.10161   TTTATGTTATAATAG               TTCTA TGGC TAGAA                TTTTAGACAATAATG  59 52
        ruvB NONE
JCR30_RS00585 NONE
JCR30_RS00590 NONE
JCR30_RS00595   97819 ..   97840 +  -2.9  -5.51402   GGTTTTTAAAAGAAA           GCGGTTTCG GAAA CAAAACGGC            TTTTTTTAGATATAT  76 132
        adhE  100687 ..  100718 + -12.6  -5.19275   GTTGATACCAGGAAA      TGATTTCTTATGAT TAAA GTCATAAGAAATCA       TTTTATTTTCTAAAT 100 49
        adhP  101993 ..  102037 +   -14  -4.30978   TGATTCCAAATAAAA TAGCACTCTCGAGTATCAGAAA ACA TTTTTG--ACTCGAGAGTGCTA TTTTGATACATTGAA 100 87
JCR30_RS00610  103660 ..  103670 +  -6.8   -2.9953   GGTATGAAAAAAGCA                 CCTC TAA GAGG                 TATACTTGTAGTTCA  59 77
        rpsJ  105298 ..  105308 +    -4  -5.49568   CAGAAGTTTTTGTGT                 TAGA TTT TCTA                 TTTTTATTTTGAGTT  79 129
        rplC NONE
        rplD NONE
JCR30_RS00635 NONE
        rplB  107904 ..  107914 +  -5.4  -4.15222   GAAATAGCGTTACAA                 TAGC TTT GCTA                 TTTATTCCGCCAACT  66 67
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
JCR30_RS00665 NONE
        rpsQ NONE
        rplN NONE
        rplX  110981 ..  110997 +  -5.1  -3.14132   CGTTACAGCAAAAAA              TCAGGCG AAG TGCTTGA              TTAATCACGAAGGAA  52 5
        rplE NONE
JCR30_RS00690  111777 ..  111813 + -10.4  -2.60194   TTGGTAAAAATATGA    CACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG    CTTAATTAAAACGGT  78 34
        rpsH NONE
        rplF  113119 ..  113133 +  -4.3  -2.62246   AGTTCAATCGACAAC               TTGTC AATGA GACAA               ATTGATTAAAATTAA  47 88
        rplR NONE
        rpsE NONE
        rpmD  114238 ..  114254 +  -8.1  -2.70932   AATAAGTTATAACTG              TGAAATC TCT GATTTCA              TAATTAAAAACGAGC  66 36
        rplO  114880 ..  114899 +  -5.1  -3.39784   TCAATCGAAGTCATC            TAATGAG GGGATA CTCATTA             TGTTCTTAAAAATAC  55 23
        secY  116210 ..  116226 + -10.9   -4.1922   GCAGAATAGAATACA              GGTTGAC ATT GTCAACC              TTCTATTTTGTTTTT 100 32
JCR30_RS00730  116995 ..  117026 + -10.4  -2.69202   GAACTCAAATAAATT      ATACTAATCTACTT GCAT AAGTAGATTAGTAA       TGATATACTAGTTTA  78 29
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK NONE
JCR30_RS00755 NONE
        rplQ  119761 ..  119811 + -12.9  -4.92791   ATTGTTAATATGTAA CGCTTGTTTATGAAAGGTATCTA AGCTA TAGAAACTTTTTATAAGCAGGCG TTTTGTTGTATTATG 100 148
JCR30_RS00765  121286 ..  121297 +    -3  -2.87944   AAAAAGAGTTGACAA                TCTT ATAC AAGA                 TATCGTATACTAATA  44 60
JCR30_RS00770  123135 ..  123148 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JCR30_RS00775  123289 ..  123321 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JCR30_RS00780 NONE
         rrf NONE
JCR30_RS00790  126694 ..  126717 +  -4.6  -3.04415   GGTCAGCGGTTCGAT          CCCGTTAA CTCCCATT TTAGCGGG           TGTAGTTTAGTGGTA  50 10
JCR30_RS00795  126785 ..  126804 +  -4.4  -3.15579   TCTCGTCACCCGCTT            TATAGTTT TCCC AAGCTATA             TTAATAAAAGCTTGG  51 23
JCR30_RS00800  126899 ..  126909 +  -2.6  -3.44586   CGTGCCCATTATCTA                 TAAT TAT ATTA                 TTATGGTCCGTTGGT  47 32
JCR30_RS00805 NONE
JCR30_RS00810 NONE
JCR30_RS00815  127169 ..  127182 +  -3.9   -2.8082   ATCCTGCTCCCGCAA               TACAT AAGT ATGTA                GTTGTTGGCTCGGTA  46 25
JCR30_RS00820  127262 ..  127272 +  -2.6  -3.63744   TTCCGTCTCGCGCCA                 TTAA AAT TTAA                 TATTTTACGGAAAGA  48 24
JCR30_RS00825  127337 ..  127353 +  -4.3  -3.42395   CGCTCCTTCGGGTTC              GGGGGTT CGA ATCCCTC              TCTTTCCATCCTAAA  53 1
JCR30_RS00830 NONE
JCR30_RS00835 NONE
JCR30_RS00840 NONE
JCR30_RS00845  127710 ..  127741 + -10.4  -4.43012   GGCCGCCGGTATACT      TGAAAAACAAGGTT TGTA AACCTTGTTTTTTG       TTTTGATCTTAGGCT 100 30
JCR30_RS00850  129080 ..  129090 +  -3.2  -2.91681   GTGGTTTTGGTTAAA                 CCAG ATT TTGG                 TATCTCGACTTGAAC  44 2
JCR30_RS00855  129427 ..  129440 +  -6.7  -3.44274   TATTTTGTTGGGATT               GCTTC TTTG GAAGC                TTCATGTTATAATTA  62 82
JCR30_RS00860 NONE
JCR30_RS00865 NONE
JCR30_RS00870  131464 ..  131488 + -12.3  -4.57482   TTTTAATAAGAAAAA          TCCTCACATGT TTA ATATGTGAGGA          TTTATTTATAAATGC 100 35
JCR30_RS00885  135674 ..  135710 +  -7.4  -4.15325   CAGTTAGGAAGAACA    GCAGTTAAATCACACT GATAA AGTCAGATTTAGCTGC    TCTTTTTGTGTCTAT  78 112
        rpoB  139429 ..  139439 +  -2.6  -4.03811   ATAAGCAATCAATTC                 TTAT TAA ATAA                 TTATTTACTGGTCTG  53 37
        rpoC  143160 ..  143175 +  -6.8  -5.38951   AATAATCTCATGAAA              GAGTCC TTAG GGGCTC               TTTTTTGTCTGAGTT  85 36
JCR30_RS00900  143696 ..  143722 +  -6.8  -5.95539   CAAAATAAGTTAAAA         GAAAATATCA CTTCTTC TGATATTTTC         TTTTTTTGTTTACGA  95 55
JCR30_RS00905 NONE
JCR30_RS00910 NONE
JCR30_RS00915 NONE
JCR30_RS00920 NONE
JCR30_RS00925 NONE
JCR30_RS00930 NONE
JCR30_RS00935  147371 ..  147385 +  -2.9  -3.43264   CCCAAACAATATAGT               CAATA AATAG TATTG               TTGTCATAAATCCTT  47 20
JCR30_RS00940  148420 ..  148431 +    -3  -5.58179   GGAAACTGAGTAATG                TCAA TTAA TTGA                 TTTTTTGTTATAATA  77 18
JCR30_RS00945  149708 ..  149732 +  -9.4  -5.28826   GTTTTCATAGATTAA          CCAAGTAAGG CAACA CTTTACTTGG          TTTTTTATGAGGTTT 100 51
JCR30_RS00950  150411 ..  150439 +  -2.4  -3.40775   GGACTTTGAGAACTG       GTCTTGAGATTGC TGGC GCTAGC-CAAGAC        TGTTTGAGTAACAAT  45 259
JCR30_RS00965 NONE
JCR30_RS00970 NONE
JCR30_RS00975  153901 ..  153920 +  -6.4  -5.66338   AATGACCAGAAAAAA            GGATTAGG ATCC CCTATTCC             TTTTTTCTTATGTTT  89 74
JCR30_RS00980  154524 ..  154555 +  -3.9  -3.21416   CCTTACGAGTATGAA      CAAAGTTTCAA GTGCTAGATG TTGGAACTTTG       TTCATCATAGGAATC  49 151
JCR30_RS01005 NONE
        lepB NONE
JCR30_RS01015 NONE
        srtB  163153 ..  163163 +  -2.6  -3.04248   ACGAAAGGAGGAGAC                 TTTT GAG AAAA                 TATTGGAAAATGTTA  43 40
JCR30_RS01025  163803 ..  163834 + -11.7  -4.58424   AATGAAACTTATTGA      CATCTCCATAGTC TTGCTT GACTTTGGAGATG       TTTTCTATGCTGATA 100 86
JCR30_RS01035  168188 ..  168210 +  -8.5  -4.85599   GACAATAGCGAAAAA          G-GGTCCACT TGTT AGTGGACCTC           TTTTTCTGGAATCGA  95 55
JCR30_RS01045  170866 ..  170890 +  -2.9  -5.79526   AATAACTACATGAAA         CGCCTG--GGA TTGTT TCCTTCAGGCG         TTTTTTTTAAGGTCT  86 43
JCR30_RS01055 NONE
JCR30_RS01060 NONE
JCR30_RS01065  174764 ..  174798 +  -8.8  -2.73338   ACGAGGGATCAATAA     TTTGACCTATAATATC TTG GATGTTAGAGGTTAAA     ATTTCAACAGCTTCT  65 335
JCR30_RS01075  175798 ..  175812 +  -3.6  -2.56914   GAAGCAGTTATAGTG               TCTTAT GTA ATGAGA               TAGATTGGTGGAATA  45 28
JCR30_RS01080  176887 ..  176897 +  -5.4  -3.37236   CTTTTAACACGATAG                 CAGT TAT ACTG                 TTATCACATTGGCTT  57 61
JCR30_RS01085 NONE
JCR30_RS01090 NONE
JCR30_RS01095  180090 ..  180109 +  -6.5  -2.74605   TCTTAAATAAAATTG            GATAAGG TATGGT CCTTATC             TAGATTTTAAAAAAC  57 21
JCR30_RS01100 NONE
JCR30_RS01105 NONE
JCR30_RS01110 NONE
JCR30_RS01115 NONE
JCR30_RS01120  185452 ..  185462 +    -4  -2.78712   ACGATGACAAAGGTT                 TTTG TTG CAAA                 TGATTGAGTTGACCA  46 8
JCR30_RS01125  186191 ..  186228 +  -5.6  -4.66609   TTAAGTAGTAAAAAA   GCAAGCCATCA-AAGGG ATTAA CCTAACTGATGGCTTGC   TTTTTAAGTAGCGTG  74 76
JCR30_RS01140  190162 ..  190184 +    -7   -4.7339   GTCTAGTATGACAAA           GAGTTGGATA GCG TTTCCAGCTC           TTTTTACCGTTTGTT  83 44
JCR30_RS01145  191528 ..  191557 + -10.1  -4.72986   AAACTGTACAATACC       GTCCAGAGTCG TCACGAAC CGACTTTGGAC        TTTTTAATAAAGGTG 100 40
        nusG  192237 ..  192267 + -14.2  -5.26875   CTATAGGCTCTCAAA       GGTCTGATGGTA TAAATAT TACCATCAGACC       TTTTTTAGTTGGCAG 100 35
         nga  194098 ..  194112 +    -5  -4.20817   CTTATATGGGAGATA               TTTCTG ATC CAGAAG               TTATTTTAGAGTATG  64 169
         slo  196270 ..  196300 + -13.5  -4.35091   CAAATACAGAAAAAA       GCTTGTCTATGAG ATACC TTCATAGACAAGC       TTTGTTATAACTGTT 100 112
JCR30_RS01185  199216 ..  199249 + -10.3  -5.83226   TTTTAAGTCTATTTG     TCCAGATTGGCTCTG TTTA CAGAGCAAGTCTGGC      TTTTTTTATTAGCTT 100 35
JCR30_RS01190  202014 ..  202037 +   -14  -4.83593   ACTCATCTAGAAAAA          CCACAAGAAC GAAG GTTCTTGTGG           TTTTTAATCGTTGTT 100 120
JCR30_RS01195  203677 ..  203687 +  -5.4  -4.07687   CTGCATCTTAAGAAA                 TAGC TCT GCTA                 TTTTAACAAAACAAT  63 43
JCR30_RS01200 NONE
JCR30_RS01205  204662 ..  204691 +  -2.2  -4.07568   TGGAAAGGATAAGAA       CTCTTAACCA GTTTGCACGG TGGCTAAGAG        TTTTAGGAAAAAGAG  52 71
JCR30_RS01210 NONE
JCR30_RS01215 NONE
JCR30_RS01220  207017 ..  207039 +  -9.9  -4.19258   TGTTAATCATTGTTT           GGGCAAGTC CTTTT GACTTGTCC           TTTTCGATGAACTGT  93 99
JCR30_RS01225  208891 ..  208919 +  -3.1  -3.10796   TCTAAAATTGAAAAA        CTCATTCATCGCG AGC TGCTATGAGTAAG        TGTTAAGTCGTCAAA  45 2
        ulaG  210599 ..  210612 +  -3.1   -4.8236   ATAATATAGTTATGT               TCTGT TTCG GCAGA                TTCTTTTTTTAAGTA  65 366
JCR30_RS01235 NONE
JCR30_RS01240  213715 ..  213734 +  -8.6  -4.74103   ATAGCAAATAGAGAA            GTCTAGGA ATTT TCCTAGGC             TTTTTAGGTTAACCA  93 55
        polA  216452 ..  216471 +  -3.6   -4.2092   GAGCTGGTACGAAGC            CAAATAAG TTTT CTTACTTG             TTATTTCTCATTTTG  59 19
JCR30_RS01250 NONE
        perR  217629 ..  217648 +  -7.2  -3.57144   TAACCCTTAAATAAA            GGCATTAT AAAT ATAGTGCC             TTTACAAATCAAAAA  68 44
         tgt  219954 ..  219991 + -12.1  -5.71712   TAAAAATGCTATGAT   CCTGGAACTGAGGGCGA TCTA TCGTCTTTGGTTTCAGG    TTTTTTTGTGTAGAC 100 42
JCR30_RS01270 NONE
JCR30_RS01275  221041 ..  221072 +   -16  -4.76041   TTAAGTTGTGTTGAA      CAGGTCTTGGCAGA TTTA TCTGCTAGGACCTG       TTTTTGGTGGGTCTC 100 57
JCR30_RS01280 NONE
JCR30_RS01285  222569 ..  222595 +  -5.1  -4.56775   ATAGAATATACAAAA         GGGCGTTTCCA AGTAC TAGAAGCGCTC         TTTTTCAGACCCAAT  69 193
         ffs  224809 ..  224832 +  -7.4  -4.75309   TCCAATGTTCAATAG          CAGCGACTTC TTTA GGGGTCGTTG           TTTTGTTACCTTTAG  83 248
        speG  226699 ..  226710 +  -7.2   -5.2112   TTATTAAGGTAAAGC                GGCC TCAG GGCC                 TTTTTTCATGATATT  89 246
JCR30_RS01310  228404 ..  228438 + -18.1  -3.32294   AAGTAAAAGCGATAA     TAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTA     TTATGCCAAATTTCA 100 146
JCR30_RS01320  231557 ..  231607 +   -26  -4.59027   AGGATGAAACGACTC AAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTTG TTTTCTCTAGTGCTT 100 84
JCR30_RS01335 NONE
JCR30_RS01340  235991 ..  236006 +  -3.2  -3.85088   AGGAAGGGAGGAGTA              GTGATG AAAA CAGCAC               GTTTTTTCTGGTTTT  52 25
JCR30_RS01345  237789 ..  237806 +  -8.4  -5.14563   AATAGATGGTATCAG             CTCCGC GTCTTA GCGGAG              TTTTTTGGTGAACAA  90 36
JCR30_RS01350  238678 ..  238700 +  -2.6  -5.31545   ATGGCATGATTAAAA           GTGGTCCGTT TAA AGTTGACCGC           TTTTTTGCTATTCTT  72 40
JCR30_RS01355  239248 ..  239274 +  -8.8  -3.31726   AAATGCTTATGACAG         CAGACCTATTCT TTA AGAGTGGGTTTG         TCTTGTCTAGGGGAG  73 54
        radA  240817 ..  240827 +  -3.2  -3.85817   AACTAACAGCAAAAA                 TAGC TCT GCTG                 TTTCTCAAAAGGAGT  52 181
JCR30_RS01365  241364 ..  241379 +    -9  -5.93252   AGTAGCCAAGTTGTA              GAGCTG AATT CAGCTC               TTTTTTATTTTTAAA 100 43
JCR30_RS01370  242204 ..  242221 +  -4.1  -5.44119   CAAAATAACATAAAA             TCAGCTT TTTA GGGCTGA              TTTTTTTCGCCTAAG  82 42
JCR30_RS01375  243877 ..  243900 +  -6.1  -5.39755   GTCACGACAACGAAA          GATTGAAGA TTAAGT TCTTCAGTC           TTTTTTATCGTTATC  86 88
JCR30_RS01380 NONE
JCR30_RS01385 NONE
JCR30_RS01390  247855 ..  247868 +  -9.5   -5.1675   AAATCAGTATTAAAG               CCCGG CTTG CCGGG                TTTTTTGATAGGTAA 100 301
        rnpA NONE
JCR30_RS01400 NONE
JCR30_RS01405  250211 ..  250239 +  -8.3  -5.36441   AGATCCTAAAAAGAA        TCTTTGGTAGTTA GTT TAGCTATCGAAGA        TTTTTTGTATGACCA  90 39
        rpmH  250672 ..  250694 +  -5.6  -5.15117   TACAACTAAAGTAAA           CCAAGAGT GCTCGAG GCTCTTGG           TTTTTTAACGTTTTC  79 51
JCR30_RS01415 NONE
JCR30_RS01420  253042 ..  253057 +  -7.6  -5.40072   TGTCAAATGGTCACT              GGAAAG GAGC CTTTCC               TTTTTTTAGGAGAGA  93 75
JCR30_RS01425 NONE
JCR30_RS01430 NONE
JCR30_RS01435 NONE
JCR30_RS01440 NONE
JCR30_RS01445  257614 ..  257660 +  -7.4  -3.93963   ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT  76 107
JCR30_RS01455 NONE
        rnmV NONE
        rsmA  261339 ..  261350 +  -4.4  -4.90266   CTACCTCAAAAATCA                TCAG TGAT CTGA                 TTTTTAGTTGATAAA  73 267
        rsgA NONE
JCR30_RS01475 NONE
JCR30_RS01480 NONE
JCR30_RS01485 NONE
JCR30_RS01490  265949 ..  265971 +  -9.3  -4.77216   TTTTGATGTGCTTAA           CACTTATGA TGGTT TCATAAGTG           TTTTTGGCTCTTGTT 100 83
        purR NONE
JCR30_RS01500  269661 ..  269691 +  -6.3   -5.1166   TCTATTTGACATGAA      GTACCGTCT-GTGT TATT ATATTAGACGGTAC       TTTTTACTTTTGGTC  84 77
        rpsL NONE
        rpsG  271130 ..  271150 +  -9.7  -4.75372   CAAATATTTAGATAA            CGGGTAGGT CCT GCCTATCCG            TTTTTGCTAAATAGT 100 434
        fusA  273295 ..  273321 +  -8.9  -5.21709   AATAACCACCACTAA        GAGGTTGAGGAT AACT ATCCT-AACCTC         TTTTTTAGTGTAACA  95 36
         gap  274791 ..  274817 +  -5.2  -5.72616   AACTGTATACAAAAA         GGCTAAGATG GAAGGGG TGTCTTAGCC         TTTTTTTGTCTGACT  86 181
JCR30_RS01540  279526 ..  279537 +  -3.6  -4.08216   GGTGGCGGAGGAGGC                GGCG GCGG TGCC                 TTTTAAAAAAGCTGC  57 8
JCR30_RS01545  280472 ..  280495 + -12.4  -4.83759   ATCGTTTAGGATGTT          GCGACAGACC TTGG GGACTGTCGC           TTTTTAAATTTCCTT 100 49
        mecA NONE
JCR30_RS01555  282589 ..  282605 +  -3.7  -3.94438   CCATTATAAAAAAAG              CAGTG CAAATGA CACTG              TCTTTTCTTGAGATG  57 83
        sufC  283442 ..  283465 +  -2.5  -2.84707   TTTGGAGACAATTAC          TTTAGCTTT CTACAA AAAGCTAGG           TGATGTTCTATATAC  42 44
        sufD NONE
JCR30_RS01570 NONE
JCR30_RS01575 NONE
        sufB  288022 ..  288061 + -13.9  -3.54158   AACACGTAAGATAAC  ATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAA   TTCATTATTGGCGTC 100 133
JCR30_RS01595  292952 ..  292995 + -15.6  -3.01924   GAAAAATAAAACGAT GTTCAAAAGAACTTTCTCGT TTAT GTGAGGGAGTTCTTTTGAAC TATTGAGGACAACTA 100 32
JCR30_RS01600 NONE
JCR30_RS01605 NONE
JCR30_RS01610 NONE
JCR30_RS01615  297502 ..  297512 +  -6.8  -4.83677   GTTTTGTATTGTAGA                 GGAC TAA GTCC                 TTTTAGTTTTATTTT  84 94
JCR30_RS01645  301058 ..  301071 +  -2.3  -3.06796   TATTTAGTTTTGAGA               GGTCT TGTG GGGCC                TTAGCTCAGCTGGGA  42 69
JCR30_RS01650  301212 ..  301244 +  -9.1   -3.3972   TAGGAAAATAGACAA      TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA      TTCCTAATTTTCTAC  79 97
JCR30_RS01655 NONE
         rrf NONE
JCR30_RS01665  304628 ..  304645 +  -6.3  -5.61824   GGCGGAGTAGAAAGA             GGTAGGA AGCG TCCTATC              TTTTTTTGCATTTTA  89 33
JCR30_RS01670 NONE
JCR30_RS01675  305647 ..  305674 + -12.2  -5.04597   AATCATTTGTGATTA        TCTTATCAGGAG TTGA CTCTTGATAAGA         TTTTTGTATATCAGT 100 323
JCR30_RS01680 NONE
        yqeH  307535 ..  307545 +  -3.2  -3.92542   CGTCGCTGTCATTGT                 TCGT AAA GCGA                 TTATTTAAAAATAAA  55 7
        yhbY  307884 ..  307911 +  -3.4  -3.21276   TAAAGTTAAAGCAAT        CTAGTCCTTTTA TTTG TATAGGGGCTGG         TCTTATGAGACGAGG  47 22
JCR30_RS01695 NONE
        yqeK NONE
        rsfS  309569 ..  309587 +  -6.7  -4.60487   AATGTTACAAAGAGA             CCTTGTC AATAC GACAGGG             TTTTTGAGGATGATA  76 39
JCR30_RS01710  310424 ..  310434 +  -5.4    -3.224   AAAAGAGTTCATTAG                 GCAT TAA ATGC                 TATTATCAAAGCTTA  55 103
JCR30_RS01715  311698 ..  311718 +    -7  -5.41746   ATAAAAAATGAGAGG            CTCAATTA AACTC TAATTGAG            TTTTTTTGGGGGCTT  93 17
JCR30_RS01720  312926 ..  312947 +  -8.1  -4.68994   ATAGAATAATAAAAA           GAGTTGAAA ACTA TTTCAGCTC            TTTTTAAGTGATGCT  86 47
JCR30_RS01725  313962 ..  313985 +  -2.5  -4.91109   TAAACCATCTATTAA          CCAGTTATTC ATCTA GAA-GACTGG          TTTTTCTGATCGGAA  66 38
JCR30_RS01730  315303 ..  315318 +  -5.4  -2.83409   GTCATGATTATGCAG              GCGATG AAAA CATTGC               TATCGTAGATTACTG  52 206
JCR30_RS01735 NONE
JCR30_RS01740  317136 ..  317165 + -18.1  -3.98075   CATAAATAAACGAAA       CAACACCCTAAGT TTTT ACTTAGGGTGTTG        TTGTTTAGATGATGT 100 32
        sstT  320032 ..  320055 + -11.1  -6.01369   TAACATAATAAAAAA          CATCCTTGG AAAACG CCAAGGATG           TTTTTTTATTATTTA 100 48
JCR30_RS01770 NONE
        htpX  324569 ..  324600 +  -3.8  -5.51046   AAGGTTAAAAAACAT      GTGAGCGTTTGGG GTTTTTG CTCAAGC-CTCAC      TTTTTTATGTCTTTG  79 22
JCR30_RS01780  325537 ..  325554 +  -3.5  -3.58703   TGAAATAGTCTAGGA             TATGAGA TGGA TTTCATA              GTTTTCTTTCTGGGA  50 223
        covR NONE
        covS  327785 ..  327802 +  -2.7  -2.53213   TATTCCTTTGGCCCA             GTCTAAC GAGA GTTAGAG              TAGCTTAAGGCATTG  41 10
        nrdR NONE
JCR30_RS01800 NONE
        dnaI NONE
         der  331998 ..  332030 +  -8.5  -4.92783   TCTCATCATTGATAA      GGACTGTGTTGTGTA TGT TACAGGAGACAGTCC      TTTTTATAATACCTT  95 79
JCR30_RS01815 NONE
JCR30_RS01820 NONE
JCR30_RS01825  337467 ..  337481 + -11.4  -4.58466   TAACCAATAACATGT               CCTGCC TTA GGCAGG               TTTTCTCATTCTAAA 100 31
JCR30_RS01830  337995 ..  338009 +  -4.2  -3.68738   GAAACTTTAGAATCA               CAGCTG ATT CAACTG               TTGGTTTGTTAAAAA  55 31
        mltG  339669 ..  339715 + -23.5  -3.33696   TGTGAATAGTCAAAT TCAGTAAACACAAACATGGTGC TTAA GCACCATGTTTGTGTTT-CTGA TTCGTTCAAAAAAGA 100 19
        greA  340363 ..  340373 +  -5.4  -3.14255   GCCAAGAGGACTATA                 GATC AAA GATC                 GTTTTCGATGGTTAT  54 158
JCR30_RS01855  343124 ..  343136 +  -4.1   -2.6891   GAATCCTCATTTTCA                GCTTG ATT TAAGC                TAATATGATATAATA  47 15
JCR30_RS01860 NONE
JCR30_RS01865  344380 ..  344411 + -14.8  -3.02511   AAGAAATGATTAACA      TTAAAAAGTGAGTA TAAC TACTCACTTTTTAA       TGTTAACAGGATAAG  95 28
JCR30_RS01870  344919 ..  344942 + -11.1  -4.82667   GGGTTTAAAAAGAAA          CTCAGTTGG CTATTT CCAACTGAG           TTTTTCATATCGTCA 100 147
        racE NONE
JCR30_RS01880 NONE
JCR30_RS01885 NONE
JCR30_RS01890 NONE
        xerD NONE
JCR30_RS01900 NONE
JCR30_RS01905  349740 ..  349751 +    -3  -4.14013   AGCAAATGACGTTTA                CAAA AGGA TTTG                 TTTTAAGGCGTTTTA  57 60
JCR30_RS01910 NONE
        yidD  350872 ..  350886 +  -4.3  -3.38112   AAACAAGCATTCGTT               GGTTT AAATC AAACC               TGTTATGATTTAAGT  53 89
JCR30_RS01920  351540 ..  351597 + -22.5  -3.73402   ACTAAAATAATGGAC TTTTTAAAAGCGTCAGTTTTTGGCAAC ATGC GTTGTCAGTAGCTGACGCTTTTAAAAA TTTAGTCAAAGCTAT 100 31
JCR30_RS01925 NONE
JCR30_RS01930  353101 ..  353150 +  -8.9  -4.43879   GCTTATTTAAATCAT TTAGAATAACATTGGCAAGCA TCACCCCT TGATTGCCAGTGTTATTTTAG TTTTAGTTAGATGAT  89 62
JCR30_RS01935 NONE
JCR30_RS01940 NONE
JCR30_RS01945  356332 ..  356352 + -11.2   -4.7254   CAGATTATTGAGGAA            GACTAGGC TCCAT GCCTAGTC            TTTTTGATGAAAAGT 100 20
        pflA  357220 ..  357236 + -10.9  -4.67556   AAGAGCTGTTATAGG              GTTGAGG TTT CCTCAAC              TTTTTAAAGTATTAT 100 39
JCR30_RS01955  358291 ..  358315 + -10.8  -5.17054   AAAGACGCTTTAAAA          GGACTTGGTT TTTTT GACCAAGTCC          TTTTTTCACTCTTCT 100 44
JCR30_RS01960  359008 ..  359032 +  -9.4   -4.7329   GCACCATAGAAAAAA          GCTAGGAACA AGGAC TGTTCTTAGC          TTTTTGAGTGCTTTT 100 32
JCR30_RS01990  366257 ..  366283 +  -3.1  -5.52023   TAATGACACCAAGAA        CGGTTTCG-TGA GTGT TTATCGAAATCG         TTTTTTCTTAATGAT  77 43
         upp  367100 ..  367111 +  -4.4  -3.90744   TTGTTAAAAAAATCA                GAGA GATT TCTC                 TTCTTTAAAGGAAAA  59 90
JCR30_RS02000  367867 ..  367890 +  -6.8   -5.0916   AGGATCTCTGCAAAA          GTATTCTAGA AACT TCTAGGATGC           TTTTTCTCTTAGAAA  84 43
JCR30_RS02005  368792 ..  368814 +  -4.2   -4.7329   TGGTCCTAAAATAGA          GCACTG-CA AAGATA TGCCAGTGC           TTTTTAGCTCATTTT  70 198
JCR30_RS02010 NONE
JCR30_RS02015 NONE
JCR30_RS02020  370748 ..  370764 +    -3  -4.32046   GCTTAGGACCGTGTG             GCAG-AC CACT GTGCTGC              TTTCGTTTTTGGGAA  60 119
        yabA NONE
        rsmI  372239 ..  372257 +  -2.5  -2.52464   CTTTACCAACAATTT            C-ATGACT TATA AGTCATCG             TAGATTAGGAGAAAA  41 14
JCR30_RS02035  372993 ..  373013 +  -2.5  -3.79764   AGCAGGTAGTAATTG            CTCGATAGC GTC GGTATCCAG            TTGATTTTCTGTGGT  53 325
JCR30_RS02045  373981 ..  374038 + -11.7  -4.62471   TTTAGGATAATGCGA CAAAGTCTCAAAAAAGGACAAGGC AACATTATAAC GCCTTGTCCTTTTTTGGGA-TCTG TTTTTAGAAATTAGA 100 31
        lctO  376304 ..  376333 +  -5.1  -4.13767   TAGAACAGACAAAAA       CCTCTGCTATCATG TCA CAA-ATAGTAGAGG       TTTTACACTGCAAAA  64 38
        scpC  381625 ..  381663 + -20.6  -3.87505   AGAAACAGACATAAA   GACCATAAAAGCAAGCCA AAC TGGCTTGCTTTTATGGTG   TTATTGTCGTGTGCT 100 153
JCR30_RS02065  383006 ..  383025 + -10.8  -2.64134   AAGAAAGTTCATTTA            GGGTAAGT TTTT ACTTACCC             TCCGTTGATTTGCTG  81 55
        metG  385239 ..  385262 +  -6.8  -5.64006   CTATTATTCAAAAAA          CCTAAGCA AGAATATG TGCTTAGG           TTTTTTTGATTGCCT  89 48
        nrdF NONE
        nrdI NONE
        nrdE  389429 ..  389456 +   -10  -5.44119   CGCACGACCTTTCAA        GACAAGCAAG CATCAGCT CTTGCTTGTC         TTTTTTTGGCCTCAA 100 90
JCR30_RS02095  391379 ..  391399 + -13.3  -5.12707   CCCTTTAGTAGTCAG            GCCACCTCT GAT AGGGGTGGC            TTTTTTGGGGTTTAG 100 157
JCR30_RS02100  391724 ..  391758 + -17.4   -3.5393   TGCACGCAATCAGCA     GCACAAAAAGCACC CCTGACA GGTGCTTTTTGTGC     TTTAGCCAACCTCAT 100 55
JCR30_RS02110 NONE
JCR30_RS02115 NONE
JCR30_RS02120  394676 ..  394699 +  -8.1  -5.14965   TTGAAAGACGTGTTT          TCACGAGGG TGAATC CCCTCGTGC           TTTTTTGGTAAAAAT  90 88
JCR30_RS02125  396304 ..  396329 +  -2.7   -5.1861   CAAATGCCTAAGAAA         GACA-GACTT ATTGCTG AAGTCCTGTC         TTTTTTAGTCATCAC  69 46
        glmU NONE
JCR30_RS02135 NONE
JCR30_RS02140 NONE
JCR30_RS02145 NONE
JCR30_RS02150  399922 ..  399959 + -24.5  -4.56597   AGCCCCTCAAAAAAA   GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC    TTTTTGAGGAGACGC 100 65
JCR30_RS02160  401715 ..  401745 +  -6.2  -5.05113   AAAATAAGATAACAA       TAAAGCACAGCGAT TTT AGTGTTGTGCTTTG       TTTTATTTATGTAAA  83 34
JCR30_RS02165 NONE
JCR30_RS02170  403398 ..  403409 +  -2.2  -5.43414   AATAGTGGCAAATGA                CATC AAAG GGTG                 TTTTTTATATGTCAT  74 73
JCR30_RS02180  406929 ..  406961 + -20.1  -5.69473   GCAGACAAACTAAAA      GAACCTGACGTCTCA TGA TGAGATGTCAGGTTC      TTTTTTTGTGATGTC 100 28
        rplK NONE
        rplA  408864 ..  408888 +  -5.8  -5.42265   AGACAAATTTCTGAA          GACAAATCTT CACTA GAGGTTTGTC          TTTTTTATGGTTTAA  86 76
JCR30_RS02200 NONE
         frr NONE
JCR30_RS02210  411421 ..  411437 + -10.9  -5.46657   AATAGGATAAAAATG              CTTTGCC ACT GGCAAAG              TTTTTTGTTACAATG 100 31
        msrA NONE
JCR30_RS02220  412225 ..  412239 +  -5.7  -4.12198   TACGTGGATAAAAAA               GAGTC ATATC GACTC               TTTTGAAGGGTTATC  66 41
JCR30_RS02225  413542 ..  413559 +  -7.7  -5.06103   TGCTATCAAAAAAAA             CTCACGT TTAG GCGTGAG              TTTTTTGACAATTCT  88 45
JCR30_RS02230  415630 ..  415653 + -10.4    -5.243   CTTAGAGTAGTTAAA          GCTGATAAGT TTAG GCTTATCAGC           TTTTTTGATGATTTA 100 46
JCR30_RS02235 NONE
JCR30_RS02240  417462 ..  417476 +  -4.2  -2.68719   GATTTACCTAGCATT               CCCATT TTT AAGGGG               CTTGTGGTATAATGG  47 46
        ybeY NONE
JCR30_RS02250  418553 ..  418566 +  -2.4  -3.25942   GGACAAGACGGTTAA               GCTT AGTGAC AAGC                TTGATCTGAAGCCCT  44 93
         era NONE
JCR30_RS02260  420069 ..  420084 +    -9  -5.63103   GAAAGACGATGTTTC              GAGAGC TTAT GCTCTC               TTTTTTTGCTTCCAA  95 97
JCR30_RS02265 NONE
JCR30_RS02270  421749 ..  421771 +  -4.2  -3.89822   TTTGTCGCTTAATTT           CTTTATTGAG TGA TTCAATCAAG           TTTGTAGAGTAAATG  57 377
JCR30_RS02280 NONE
JCR30_RS02285  423209 ..  423244 +    -5   -3.3164   GTAGCTTTGGTAGCG    TCATTATTTGTTTTTA TCGA TAAAAGAAAATAGTGA     TTATGCCAATGAATT  54 202
JCR30_RS02290 NONE
JCR30_RS02295  423958 ..  423974 +  -2.3  -3.02471   GCGTATTGAAAATTG              GTTAAAA AAG TTATAAC              TGTCTCTGATAACAG  42 117
JCR30_RS02300  424594 ..  424628 +  -8.8  -5.46657   TCATCTTTGCCAAAG     CTCGTCATTTTATATG ATT TATATAGAATTACGAG     TTTTTTGTTAGACTA  95 173
JCR30_RS02305 NONE
JCR30_RS02310  426316 ..  426338 +  -3.4  -4.83615   AAGATAAATAAAGAA          GAGGTCAGG GAACTA CC-GGCCTC           TTTTTGTCCGAAATA  68 83
        rgg2  428796 ..  428806 +  -5.4    -4.005   GGGGGTGAGGACTGG                 TCTG AGG CAGA                 TTTATGAGTTGCTTT  63 8
        mutM NONE
JCR30_RS02340  430492 ..  430504 +  -3.5  -2.73875   TTAGCGCATCAAGGG                TTATA TGT TATAA                TAGTATTAAGAGCGA  43 115
JCR30_RS02345 NONE
JCR30_RS02350 NONE
        rpmG NONE
        secG  433839 ..  433865 +  -6.6  -5.60993   CAAGTAAATAAGGAG         TGAGCTTGAC AGAGTTA GTCTAGCTCA         TTTTTTTATCAGCGA  89 30
         rnr NONE
        smpB NONE
JCR30_RS02375  437521 ..  437541 +    -4  -5.81412   TTAGCACAAAAAAAA            CAGAGTTA GTTCA TATCTCTG            TTTTTTTTAAATAGG  90 90
        ccpA  444587 ..  444602 +    -9  -4.74453   TTTTCAATACTAAAA              TCAGCC CTAA GGCTGA               TTTTTGCATGTCTTA  93 89
JCR30_RS02420 NONE
JCR30_RS02425  447206 ..  447233 + -10.6  -6.09196   TAAGGTGGAACCACG        CTGATTGCGTCC TTTG GGATGCGGTCAG         TTTTTTTGTTTTGGA 100 243
        thrS  449367 ..  449384 +  -5.5  -5.47159   AATCAATGGCAAAAA             GAGGTCC TTAT GGGCTTC              TTTTTCTTTCTTAAA  84 39
JCR30_RS02435 NONE
JCR30_RS02440 NONE
JCR30_RS02445  452158 ..  452182 +  -8.6  -5.33785   TAGATAATGAAGGAA          GGCAGCTGTT GTAAA AATGGCTGCC          TTTTTTGTGATGGTT  95 90
        dhaK NONE
        dhaL NONE
JCR30_RS02470 NONE
JCR30_RS02475  456580 ..  456598 +  -9.6  -5.53991   AATGAACCAAAAAAA             GTTGGGTC TAG GACTCAAC             TTTTTTTGGTGGCTA 100 39
JCR30_RS02480 NONE
JCR30_RS02485 NONE
JCR30_RS02490 NONE
JCR30_RS02495  460771 ..  460804 +  -5.6  -3.48288   TTAGAAAAATATAGT     TTTGTGATTTTT TACTAACCAC AAAAATCACAAA      TTGTAATATCAATTA  57 115
JCR30_RS02500 NONE
        vicK NONE
JCR30_RS02510  463741 ..  463773 + -12.1  -5.27399   AGAGAATATGCAAAG      TAGCGCTGATTGGTG ATA TACCAGTCAGGGCTA      TTTTTTGATGTCTTA 100 55
JCR30_RS02515 NONE
         smc  468391 ..  468409 +  -9.6  -5.52909   TGACCAATTAAAAAA             CAGAAGGG AGT TCCTTCTG             TTTTTTTGGATGTTC 100 30
        shp3  469664 ..  469684 + -11.3   -3.3854   TAGGTGTACACCTAA            GTCTTTAGA TAC TCTAAAGAC            TTATAGGTAATGGTT  89 44
JCR30_RS02535 NONE
JCR30_RS02540 NONE
JCR30_RS02545 NONE
JCR30_RS02550 NONE
JCR30_RS02555 NONE
JCR30_RS02560 NONE
JCR30_RS02565  476491 ..  476501 +  -2.6  -4.84363   GTATGTAAGTAAATT                 TATT TAT AATA                 TTTTTGATACTTTGA  66 126
JCR30_RS02570  478248 ..  478261 +  -2.5  -3.95883   TGATTAACAAAAACA               TTTTT GCGA AAAAA                TATTTTTAAGTAATA  53 34
JCR30_RS02575  479582 ..  479623 +  -8.9  -6.02919   TTTTTCAAAGTAAAG GCACTAAGTTGATCTGA CTTACACA TCTTATCAACTTAGTGC  TTTTTTTATTTCTAG 100 75
JCR30_RS02605 NONE
JCR30_RS02610 NONE
JCR30_RS02615 NONE
JCR30_RS02620  483802 ..  483819 +  -7.7  -5.24129   AGAAATATACCGAAA             GCACTTC AAAG GAGGTGC              TTTTTTGTACCCCAA  89 82
JCR30_RS02625  484282 ..  484293 +  -2.2  -2.52464   AGCTGCTCTTGATTA                TCTG GCAA CGGA                 TGCCTTAGAAGCACG  39 6
JCR30_RS02630  485018 ..  485044 + -10.3  -4.98911   TAGTTTATCGCTTGT         TTTATCGCTTG AAGAA CGAGCGATAAA         TTTATTTTTATGGTA 100 368
JCR30_RS02635 NONE
JCR30_RS02640  486557 ..  486571 +  -2.8  -3.76968   ATATTTCAAAAGAAT               TAGGAT TGA ACCCTA               TTTCATCGCTAGATT  51 451
JCR30_RS02650 NONE
JCR30_RS02655 NONE
JCR30_RS02660 NONE
JCR30_RS02665  489841 ..  489873 +  -8.7  -4.44187   GTCTCTACTAAAAAA     TACTCCGTCTTCTA TGAAAC TAGAA-ACGGAGTA      TTTCTGTTTGTCTAT  89 155
JCR30_RS02675 NONE
JCR30_RS02680  493136 ..  493146 +  -2.6  -3.93708   TTAGAAGAGGAGAGT                 TAAT GGG ATTA                 TTTGATCGTTTATTT  53 23
        ftsY  494698 ..  494725 + -14.3  -4.85129   TTATAACAGCAAAAA        CCAGTCTCGTT CAATAA AACGAGACTGG         TTTTTAGTATGTCAT 100 35
JCR30_RS02695 NONE
JCR30_RS02700 NONE
JCR30_RS02705  500644 ..  500670 +  -8.9  -5.54885   GATAAAACTCAAAAA         GCATTTGTTTT GATAA AAAACAAGTGC         TTTTTTATTAGTCTT  95 83
JCR30_RS02725  505485 ..  505500 +  -5.4  -5.07652   ACTTATTGAAAAAAA              TCAGTC GTAA GACTGG               TTTTATTTTGCGAAA  79 439
JCR30_RS02735  505915 ..  505950 +  -8.4   -4.7629   TTGATATGTAAGTAA    GCGAAGGGTCTTATCA GCTA TGATGAGGCTTTTTGC     TTTTTGACTTAGTAA  86 110
JCR30_RS02740 NONE
JCR30_RS02745 NONE
JCR30_RS02750 NONE
JCR30_RS02755  508844 ..  508859 +  -3.3  -6.20267   AACTGAAGAAGGGGG              GATTG TGGCTT CAATC               TTTTTTTGTTTTTGG  95 116
JCR30_RS02765  510386 ..  510396 +  -5.4  -3.07895   TGACACCATTACACA                 GGTA ATC TACC                 TATCTTGAAAATAGA  54 90
JCR30_RS02770  511725 ..  511777 +  -7.3  -5.77853   TAACAAGAAATACTA GAGGCCCTCTTTTTCCAA--ATGGT ATACG ACCATAGTTGGGAAAAGAGAGCCTG TTTTTTTTGAAAGTT 100 41
JCR30_RS02775  512409 ..  512428 +  -9.4  -2.72661   ACTGTTAATAAACCA            GTCTTCAT GGTA ATGAAGAC             TGGTTAGAGATAATA  72 303
JCR30_RS02790  515370 ..  515382 +  -4.9   -3.5774   CAATAAGAACGTTTT                GATAA TGT TTATC                TTTAAACGATTGGAT  56 322
JCR30_RS02815 NONE
JCR30_RS02820  519602 ..  519633 + -17.6  -3.01791   ATAGTAACTATAATA      CAAAATAGACTTGG CACG CCAAGTCTATTTTG       TATTAACCAAGAAGT 100 37
         ppc  524930 ..  524940 +  -2.4  -4.79949   GAATTTTAAAGGTTA                 GCCC TTG GAGC                 TTCTTTTTTTGAGGA  62 91
JCR30_RS02840  526319 ..  526333 +  -8.6  -4.16943   AATAATATTCTAAAA               TCTCCT TTA AGGAGA               TTTTAGAATATAGAC  85 36
         tuf  527914 ..  527930 + -10.8  -4.87807   CTTAAGTTTGAAGAA              GCCCCC AATTC GGGGGC              TTTTTGCTATCTTAA 100 81
JCR30_RS02850  528857 ..  528902 + -20.2  -3.21062   GATTTCCTTAACTAA GTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGGC TTAACTCTTAATATG 100 26
JCR30_RS02875  534596 ..  534621 +    -7  -5.27335   AATCTTAAACAGCGA         GACTTGTTTA AGAAAA TAAACAGGTC          TTTTTATTTGAACAA  89 184
JCR30_RS02880  537361 ..  537384 + -10.4  -5.67967   TAATAGACGCTAAAA          GGTTTGAGAT AATT GTCTCAAACC           TTTTTTTATAATCGT 100 38
JCR30_RS02920 NONE
JCR30_RS02925 NONE
JCR30_RS02930 NONE
JCR30_RS02935  547756 ..  547771 +  -3.4  -2.85784   TGGCTTTAGTGCTAG              TAAAAA CGTT TTTTTA               TCATTCATTCAATTA  44 61
JCR30_RS02940  549001 ..  549018 +  -6.3  -2.91912   AGAAGGATCATAATA             CTGCTTT GACA AAGGCAG              TATCTGAGTCCATAA  58 359
        queG NONE
        prfB NONE
        ftsE NONE
JCR30_RS02960  553468 ..  553510 + -19.5  -2.74514   TCAAGAGAAGAAAAG CACCCCAAAAGTTAGATGT TTGAT GTATCTAACTTTTGGGGTG TCATTCAAAATTTAG 100 206
JCR30_RS02970  555244 ..  555266 +   -15  -5.61913   AATGATTAATACTGA           CACTGTGAGT GAA ACTCACAGTG           TTTTTTATATTTCTT 100 42
JCR30_RS02975  557823 ..  557863 +   -13  -4.74801   TAGTAGAAACGGACT  GTTTTCTGATATAATAGA AAGGA TCTATTATATCAGAAAAA  TTTTTAATGGCGTTA 100 12
JCR30_RS02980 NONE
        asnS  560735 ..  560769 + -12.5  -3.14931   ATTAGACCCTAATAA     TACAAAAAGTTCATG TCATC TATGAACTTTTTGTA     TTGGTAAGAAGTGAG  91 29
        rapZ NONE
JCR30_RS02995 NONE
        whiA  563928 ..  563951 + -10.4  -5.03994   TATAGAACATTTTTA          TCGTATGAGC CTTT GTTCATACGA           TTTTTCTGTCTAAAA 100 36
JCR30_RS03020  567638 ..  567648 +  -2.6  -4.70319   TACCTGTTAAATCGT                 TAAT TAT ATTA                 TTTTGCTTTTGGTAA  65 435
JCR30_RS03030 NONE
JCR30_RS03035  569176 ..  569186 +  -5.4  -3.16288   AGTCAATAGAATTGA                 CGTT AGA AACG                 TATTGATAAAGTTTC  55 183
JCR30_RS03045 NONE
JCR30_RS03050  570097 ..  570123 +  -3.8  -4.12198   TACAACTTAACGTTT         TACAAAGTTGTA TTT TACAAAGTTGTA         TTTTACAAAGTTGTA  59 370
JCR30_RS03055 NONE
JCR30_RS03060 NONE
JCR30_RS03065 NONE
JCR30_RS03070 NONE
JCR30_RS03075 NONE
JCR30_RS03080 NONE
JCR30_RS03085  572687 ..  572698 +  -4.4  -3.67976   GTAATTAAGAGGTTG                CTAG ATGA CTAG                 TTTAGACTTGCTCGG  55 14
JCR30_RS03090 NONE
JCR30_RS03095  573984 ..  573998 +  -4.2  -3.05935   TCTTTGAAACCCTTG               GCATTC GCG GGGTGC               TTGAATGAGCAATCT  50 3
JCR30_RS03100 NONE
JCR30_RS03105 NONE
JCR30_RS03110 NONE
JCR30_RS03115 NONE
JCR30_RS03120 NONE
JCR30_RS03125 NONE
JCR30_RS03130 NONE
JCR30_RS03135 NONE
JCR30_RS03140 NONE
JCR30_RS03145 NONE
JCR30_RS03150  579332 ..  579350 +  -6.7  -2.76833   AGTGTCCCAGAATGG             GCTAGGC AATAG GCTTAGC             ATTCATTTGCTATTT  57 517
JCR30_RS03155  580342 ..  580358 +  -7.3  -6.17268   AACTGTTTATGGCAG              TCATCAC ATA GTGGTGA              TTTTTTTTGTTATGG 100 15
JCR30_RS03170  581688 ..  581705 +  -2.8  -3.02511   AAACGGGTGTAAAAA             TTAACA ACAGTA TGTTAA              TATTCGGAAACTACC  43 46
JCR30_RS03175 NONE
JCR30_RS03180 NONE
JCR30_RS03185 NONE
JCR30_RS03190 NONE
JCR30_RS03195 NONE
JCR30_RS03200 NONE
JCR30_RS03205  586569 ..  586581 +  -5.5   -5.7946   GAAGAAATTTTACAA                GGGCT ATA AGCTC                TTTTTTTATTGGAGG  91 17
JCR30_RS03210 NONE
JCR30_RS03215 NONE
JCR30_RS03220 NONE
JCR30_RS03225 NONE
JCR30_RS03230 NONE
JCR30_RS03235  590008 ..  590028 +  -8.3  -5.26119   TTATGTAATTTTTAA            GGTCGCA TTTAAGC TGCGACC            TTTTATTTTTGACAA  90 33
JCR30_RS03240  590423 ..  590437 +  -2.8  -3.42366   CTTGTGGATACAGAG               CCTTTT GAA AAACGG               TTATACCATTTTAGA  47 69
JCR30_RS03245 NONE
JCR30_RS03250 NONE
JCR30_RS03255 NONE
JCR30_RS03260 NONE
JCR30_RS03265 NONE
JCR30_RS03270 NONE
JCR30_RS03275 NONE
JCR30_RS03280 NONE
JCR30_RS03285  601851 ..  601861 +  -5.4   -3.6692   CCGTCATCATAGCAA                 TAGC GGT GCTA                 TATTTTCCACTGGCC  59 67
JCR30_RS03290  603138 ..  603158 + -11.8  -4.23988   TTAGATAAGACAAAT            GCCCTCGC TTTTT GCGGGGGC            TGTTTTTTGGTATCC 100 37
JCR30_RS03295 NONE
JCR30_RS03300  604653 ..  604674 +  -9.4   -5.5208   TAAATAAAAAGCCAA           CCGCTCTC TTGATT GAGGGCGG            TTTTTTGTGTTATAA 100 34
JCR30_RS03315  606650 ..  606662 +  -4.8  -2.57132   AGAAGTCGGGGAATA                GTCG AGGAA CGAC                ATTGTAAAGCCACAA  49 55
        rlmD  608286 ..  608302 +  -2.3  -3.27298   TTATTGATAACTCTA              TGTTTAT TTT AGAAACA              TTCATGGTTAAAAAA  44 145
        rocA  610225 ..  610250 + -11.9  -4.74453   TCAAAATCAACTTAA         GAGTCTGAGAC AATA GTCCCAGACTC          TTTTTGAATATGTTA 100 63
JCR30_RS03340  615479 ..  615492 +  -4.5  -3.06796   CTAAAAAAGATGTTA               CTAGC ATGA GCTGG                TTAGCTCAGGTAAAG  50 37
JCR30_RS03345 NONE
JCR30_RS03350  618734 ..  618774 +  -9.7  -3.81557   TTACCAATGATTAAA  CAAGGGCCTTTTTCCTCAT GTT AAGAGGATCGAGGCTCTTG  TATTTCTTTGGAAAG  83 80
JCR30_RS03360 NONE
JCR30_RS03365  622283 ..  622298 +    -9  -3.34332   ATAGGACTTAAGGAA              CTGGTC ACAA GACCAG               ATTTTATCTAATCGT  75 37
JCR30_RS03370  623826 ..  623845 +  -7.8  -4.81212   TTGATTATAAGTTGA            GGGCTGGG AAAT CTCAGCTC             TTTTCTTCTGATGAG  83 54
JCR30_RS03375 NONE
JCR30_RS03380 NONE
JCR30_RS03385 NONE
JCR30_RS03390  631419 ..  631445 +  -5.8  -3.57561   AATAAAAAACAAATA         GGCGTCCTTTAT TAC GTGAAAGGCGCC         TTTACAAGGTTGAAA  62 102
JCR30_RS03395  632348 ..  632366 +    -3  -4.58685   TTAAACCTCTTTTAG             GTGATGAG TAA CTCAACCC             TTTTTAAAGAACTTT  62 15
JCR30_RS03400 NONE
JCR30_RS03405 NONE
JCR30_RS03410  634108 ..  634130 + -11.4  -4.74706   TATGGAAAAGCAAAA           GAGAAGGTGA CGC TCATCTTCTC           TTTTTACGTATTCAA 100 70
JCR30_RS03430 NONE
JCR30_RS03435  637744 ..  637770 + -13.8  -4.17906   GTAACACGAAATTCG         TCCCTGTCTAGG TTA TCTAGGCAGGGA         TTATTTGGTTTCATT 100 240
JCR30_RS03445 NONE
JCR30_RS03450  641370 ..  641405 + -10.5  -4.87807   CATTGCTTCCGCAGA    GTCCTGCCGC-TAGAC CATCA GTCTAAGCGACAGGGC    TTTTTGCTATATTCA 100 52
JCR30_RS03460  643736 ..  643750 +  -4.2  -3.07192   AGTGAAAGTGATTCT               CAAGCC TTT GACTTG               TGTATTCCACCCCTT  50 47
JCR30_RS03465  644804 ..  644830 +  -5.8  -4.69027   GATTTTCGTCATGAA         CCTGATCTCATT AAA AGAGAGGTCGGG         TTTTTACATGCCTTT  77 91
       ccdA2 NONE
JCR30_RS03475 NONE
        msrB  647501 ..  647516 +  -7.5  -3.87815   AAGACTAGTATGAGA              GGGCC ATGCAA GGCCC               TTTATAAAGATAAGG  73 73
JCR30_RS03485 NONE
JCR30_RS03490  650040 ..  650052 +  -7.7  -3.04144   GCATGTCAGCCATTT                CCCTA AGT TAGGG                TATTGGAGATAAGAA  66 54
JCR30_RS03495 NONE
JCR30_RS03500  651945 ..  651988 + -10.5  -4.75404   AAGGTTAACAAAAAA GCGAGTAAACGAATGTCCTG TCATT TAGGTT-TTCGTTTACTCGC TTTTTGATGAGATTT 100 68
JCR30_RS03510  653413 ..  653426 +  -2.5  -4.62336   TCTGACTTATTTTAA               TTTAT AAGT ATAAA                TTTTTACACTAAGAT  60 75
        arcA NONE
JCR30_RS03520 NONE
        argF  656547 ..  656593 + -11.1  -4.83169   ACTTTAACTACATGA CAAGTCGTTCTGGTTCTCGTGTC CTT GAC-CG-GAACTAGAACGGCTTA TTTTTATGAAAAGGT 100 119
JCR30_RS03530  658128 ..  658138 +  -5.4   -2.6927   TTAACAGATAGGAGG                 TTCC TAT GGAA                 TCCTATATCACACCT  51 37
JCR30_RS03535 NONE
        arcC  660566 ..  660599 + -14.9  -4.37711   ACAATAGTAGTATTA     GAAAAGGCTAATTTT ATTG AGAATTAGCCTTTTC      TTTTAGCTTTGATAG 100 157
JCR30_RS03545 NONE
        rsmD NONE
        coaD NONE
JCR30_RS03560  663963 ..  664011 +  -4.5  -5.08824   TAACTCATAAAAAAA CGGTTGAACCAGATAGACAGATC CTT GACCAGTCTTTTGGGTTCAATCA TTTTTTACATAAAAC  76 82
JCR30_RS03565  665424 ..  665441 +  -2.7   -4.7373   TCTTATGCAACTCTT             AACCTTA AGCT TAAGGTC              TTTTTGATAACATAG  63 154
JCR30_RS03570 NONE
        rlmN  667493 ..  667514 +  -8.8  -5.37043   TGATGACAAAATATT           CCTAGTCA CTAAAA TGACTAGG            TTTTTTATCTGGCCT  95 72
JCR30_RS03585  668932 ..  668955 +  -6.1  -5.26316   TGCCTTAGGATAAAA          GAAGTCAAT GATAAA ATTGGCTTC           TTTTTTATGGAATCA  84 48
JCR30_RS03590 NONE
JCR30_RS03595 NONE
JCR30_RS03600  670700 ..  670730 +  -5.5  -3.76534   AATTCCTTTTTTTGC       TGTATCCAGACTT GCTGA AAGTCTGAAAACA       TTTACAATTTATTAA  61 96
        typA  672685 ..  672727 +  -8.1  -3.38581   AACTAAATAAAATAG CAAAAAGATATTTAAGAAA AGTCA TTTTTTAAAGGTCTTTTTG TGTTTACAAGTTCCT  72 57
JCR30_RS03610  673069 ..  673098 +  -9.5  -3.77927   TTTTATACGATAAAA       GGACTGAT-TTGTT TTA GACAATATCAGTCC       TCTTTTAATAGTTCA  81 68
JCR30_RS03615 NONE
JCR30_RS03620 NONE
JCR30_RS03625  677083 ..  677104 + -10.3  -5.69473   TTATATAACAAAAAA           CGTAAAATG ATAA CATTTTACG            TTTTTTTATGGTATA 100 125
        ftsA  678535 ..  678550 +  -2.6  -3.91084   AGAACGTGTTCGTGG              CATATT TGGG AGTATG               TTTGATTAAAAGTAA  53 1
        ftsZ  679896 ..  679908 +  -4.1   -2.8372   TCCATTCTTTAAAAA                CCGTT AAT AATGG                ATTTACTGACAAATA  48 19
JCR30_RS03640 NONE
JCR30_RS03645 NONE
JCR30_RS03650 NONE
JCR30_RS03655 NONE
JCR30_RS03660  683113 ..  683123 +  -3.2  -3.10622   GCAAGCGGGAGATGA                 TGAG AGT CTCG                 TATTCCCTAAGTATT  45 76
JCR30_RS03665  686177 ..  686200 + -13.2  -5.14965   TGAGTAAGAAGACAA          CCATCGGGTC TTAG GACCTGATGG           TTTTTTAGTAGAGCT 100 66
JCR30_RS03685  690166 ..  690180 +  -7.8  -5.88565   GACATAGTAAAGAGA               CTTGCC TGA GGCAGG               TTTTTTTATTGTCAA 100 45
JCR30_RS03690 NONE
JCR30_RS03695  691708 ..  691750 +   -24  -3.73968   AATCTGTTCTATGAA TTATAAAAGGAAGTCCTAAA TGA TTTAGGACTTCCTTTTATAA TTTGCTAAGGCATTT 100 40
JCR30_RS03700  693386 ..  693409 +  -7.4  -4.75309   TCCAATGTTCAATAG          CAGCGACTTC TTTA GGGGTCGTTG           TTTTGTTACCTTTAG  83 160
JCR30_RS03710 NONE
JCR30_RS03715  697305 ..  697324 +  -2.8  -5.98675   ACATAAGAGAATATA            AGAAGTCA GCAA TGGCTTCC             TTTTTTGTTTTTCTG  91 59
JCR30_RS03720 NONE
JCR30_RS03725 NONE
JCR30_RS03730 NONE
JCR30_RS03735 NONE
JCR30_RS03740 NONE
        recN  702776 ..  702802 +  -7.4  -4.09285   GGCTCGTGAACTACT         TGCCAAACATTA AGA TTATGTTTGGTA         TTTGATATTTTCATA  78 13
JCR30_RS03750  703926 ..  703967 +  -5.9  -4.64591   TGTAGTTGTAAAAGA CGGGGCAAATGTTCAAGCGT GAA AAGGTTG-ACTTTTGCCTCG TTTTGTATCTCGTTA  74 53
JCR30_RS03755 NONE
JCR30_RS03760 NONE
JCR30_RS03765  706407 ..  706420 +  -3.9  -3.04322   TAATCGCTTTTTTTA               GATAT GATA ATATC                TGTTAAAGCATTAAG  47 67
JCR30_RS03770  706754 ..  706790 +  -5.9  -5.47159   ATTGCATAGATAAAA   GCCCATTGTATCAAGC GTTACA GCCTG-TGCAGTGGGC    TTTTTTGTGTTCAGG  86 40
JCR30_RS03790  709803 ..  709815 +  -4.9  -2.78384   ATTTTAAACACTATA                TGATT TTA AATCA                TATAGTAGAAAGGAC  51 34
JCR30_RS03795 NONE
JCR30_RS03800  710927 ..  710940 +  -2.4  -3.81951   TTGCTAATACCTAAT               TTGC TAATGT GCAA                TTTGCTAATGTGCAA  50 390
JCR30_RS03805 NONE
JCR30_RS03810 NONE
JCR30_RS03815 NONE
JCR30_RS03820 NONE
JCR30_RS03825 NONE
JCR30_RS03830 NONE
JCR30_RS03835  713581 ..  713592 +  -4.4  -3.67976   GTAATTAAGAGGTTG                CTAG ATGA CTAG                 TTTAGACTTGCTCGG  55 14
JCR30_RS03840 NONE
JCR30_RS03845 NONE
JCR30_RS03850 NONE
JCR30_RS03855 NONE
JCR30_RS03860 NONE
JCR30_RS03865 NONE
JCR30_RS03870 NONE
JCR30_RS03875  718099 ..  718117 +    -3  -2.65409   ATACTAAACAAAAAA             AGCCAGCT CAC AGCTGACC             ATTGGTTAATAATTC  43 34
JCR30_RS03880 NONE
JCR30_RS03885  719180 ..  719196 +  -2.3  -2.89569   ATTTTGGAGGTTGAA              TTTCATT GAA AAAGAAA              TGCTTAATTTGCAAA  41 168
JCR30_RS03890 NONE
JCR30_RS03895 NONE
JCR30_RS03900 NONE
JCR30_RS03905  722523 ..  722543 +  -6.2  -4.77165   AACGCAATATATTAA           GCACCTAGA GCAA TCT-GGTGC            TTTTCTTATGCCCAA  77 26
JCR30_RS03910 NONE
JCR30_RS03915 NONE
JCR30_RS03920  723255 ..  723270 +  -5.4  -5.19328   TCAACTTAAACCAAA              GTCGTA GCAA TACGGC               TTTTTATTGTGCCCT  79 32
JCR30_RS03925  724751 ..  724766 +  -6.8   -5.1861   CAGCTGTTAAAAATT              GCATCC GAAA GGGTGC               TTTTTTAATGCTAAA  84 31
JCR30_RS03930 NONE
JCR30_RS03935 NONE
JCR30_RS03940  726395 ..  726406 +  -5.8  -2.71731   GAAACCTGAATTAGA                GGCA CTCT TGCC                 TGGTTAGGAGGTAAA  55 7
JCR30_RS03945 NONE
JCR30_RS03950 NONE
JCR30_RS03955 NONE
JCR30_RS03960  727690 ..  727701 +    -3  -3.61715   CTATCAAGCTGTATT                TGAT ATTA ATCA                 TTATTAAAGGAGATA  50 7
JCR30_RS03965 NONE
JCR30_RS03970 NONE
JCR30_RS03975 NONE
JCR30_RS03980 NONE
JCR30_RS03985 NONE
JCR30_RS03990 NONE
        hylP NONE
JCR30_RS04000 NONE
JCR30_RS04005 NONE
JCR30_RS04010 NONE
JCR30_RS04015 NONE
JCR30_RS04020 NONE
JCR30_RS04025  739705 ..  739726 + -10.8  -4.27297   TAAGATAAGACAAAT           GCCCTCGC TTTTTT GCGGGGGC            TGTTTTTGTTATTAA 100 55
JCR30_RS04030  740950 ..  740980 +  -8.2  -6.08342   AAATAGAATTTTTTA       GCAAGAATCGCCTG ACA CTAGCGACTCTTGC       TTTTTTTATTTGTTG 100 35
JCR30_RS04035  741333 ..  741354 +  -9.4   -5.8187   AAAATAATAAACCAA           CCGCTCTC TTGATT GAGGGCGG            TTTTTTTATTAGATG 100 34
JCR30_RS04040  742348 ..  742374 +  -6.7  -5.04385   ATCAATAATAAACAT         GCCAAATCT TTTCTCACT AGATTTGGC         TTTTTTACGAATATA  84 33
JCR30_RS04045  742787 ..  742828 + -11.1  -5.88197   ATAATTCGTCTAGAA AAATCTTGTTGCTATCGAT GTTT ATTGATAGCGACAAGGTTC  TTTTTTTATATTTGG 100 224
        cadA NONE
JCR30_RS04055  745231 ..  745264 + -14.1   -5.1615   TTCCCATTTTAAAAA     GCTTGGAAA-GTGTAC AAA GTGCACATTTCCAAGC     TTTTTTGACTATTAA 100 29
JCR30_RS04065  747160 ..  747175 +    -9  -5.35354   TGAATAACTTAAAAA              CCAGAC TTTG GTCTGG               TTTTTTGGTTCTATA  95 34
JCR30_RS04070 NONE
JCR30_RS04075  748511 ..  748542 + -10.3  -5.01732   ATAGTTATATGATAA      TGACGAGCCCTTTC TTGTT GAAAGGGCTTG-CA      TTTTTTAGGGAAATT 100 54
JCR30_RS04080  749648 ..  749666 +  -6.8  -2.74782   GATTCATCAGGCGTA             CAAACTAT CTT ATGGTTTG             TGCTTAGAGATTTCT  57 288
        recR  750791 ..  750803 +  -3.3  -3.04715   ATGTTGGTGCCTTTA                CTCGC AAA GAGAG                GTTTTGAAAAGGCTA  45 46
JCR30_RS04090  752040 ..  752055 +  -4.8   -3.8637   AGGGAGTTTGACATT              TTAGAA ATTT TTCTAA               TGTTTTGTGCTATAA  59 148
JCR30_RS04095  753518 ..  753532 +  -2.8  -2.94076   CTTGATTTTTATAAA               ACTTTC AGA GAAAGG               CTTGTTCTCTCATGA  42 36
JCR30_RS04100  754319 ..  754346 +  -2.6  -5.40072   ATCAGCTATAATAAG        AAGAGTCTGGGA TGAT TTCCAGGCTCGA         TTTTTTTAAAAAAGA  76 62
JCR30_RS04105  756344 ..  756360 +  -5.1  -4.56597   TTAAAAGGTTTATAA              GGCAG CTTCGCA CTGCC              TTTTTAGAAAAGAGA  69 295
JCR30_RS04110  758003 ..  758036 +  -9.1  -4.37658   CAAAGGTGAATAAGC     TTAAAGAGAGTTGAT GAGA GTCAGCTCTTTTTAA      TTTTCTGAAAAAGTT  93 28
JCR30_RS04115  760133 ..  760157 +    -8  -5.70761   TGAAGCATAAAAAAA          TCATTGAGAT GATAA GTCTCAATGA          TTTTTCTTTTCTTTT  93 31
JCR30_RS04130 NONE
JCR30_RS04135 NONE
JCR30_RS04140 NONE
JCR30_RS04145 NONE
JCR30_RS04150  766963 ..  766983 +  -9.8  -5.13521   ATAAGAAAAGGGTTT            CCAATCTC AAAAA GAGATTGG            TTTTTTAAGTGCTTT 100 37
JCR30_RS04155 NONE
JCR30_RS04160 NONE
        nagB  771490 ..  771505 +  -3.3  -3.93868   AACCTCATTTAAGAA              GAAGT CTTGTA ACTTC               TATTTCTTTTGCAAG  55 43
JCR30_RS04185 NONE
JCR30_RS04190 NONE
        pepF  775369 ..  775423 + -21.9  -5.40873   GACAAAAAGAGTTTA GGATTGATAGAAATGGAGATTCACA GTTGG TGTGAATCTCCATTTCTATCGGTCA TTTTCTTTTTATATT 100 57
JCR30_RS04200  776937 ..  776952 +  -4.7   -6.0427   AATTTAAAAGTAAAC              CCTAG CAAAGC CTAGG               TTTTTTTTATATAAT  93 53
JCR30_RS04205  777698 ..  777708 +  -2.6  -2.60244   GTAACATTGATAAAT                 TTAT GTT ATAA                 TAAATTAGTTAAAGA  41 41
        prsA  779001 ..  779015 +  -4.2  -2.54181   GTACCGCGGTTTTCG               CCCTCT GTG AGATGG               ACTTGTTTTGTATTG  47 226
        alaS  781818 ..  781837 +  -6.5  -5.56264   TAAATCCATAAAAAA            CCAAGTT ATTTAG AACTTGG             TTTTTTATATTTGAA  87 38
JCR30_RS04220 NONE
JCR30_RS04225  783155 ..  783174 +  -2.2  -3.92542   CCTAAAAGGAGACTG            TTTATGAA AGGA TTCATTAA             TTATTTAAAAATAGC  52 41
JCR30_RS04230  784052 ..  784064 +  -7.7  -2.56164   TATATTTAAAAATCT                CAAGC TGA GCTTG                CTTAATAGTTGCGAA  63 224
JCR30_RS04260 NONE
        ptsP  792620 ..  792639 +  -8.6   -5.1675   GATTAAAGGGTTAAA            GAGTTGGT TTAA ACCAGCTC             TTTTTTGCTAGCTAA  95 35
JCR30_RS04270  794232 ..  794267 + -14.4  -5.69023   CAGTAATAAAAAAAA    TAAACAAAAAGTTAGG TTAA CTTAACTTTTTGTTTA     TTTTTTTAATGTTTT 100 35
JCR30_RS04275  795627 ..  795662 + -13.6  -4.73388   TAGAATTGATATACT    AAACAATCCAATTACT TTGA AGTAATTGGATTGTTG     TTTTTAGTAGCCCTT 100 61
         udk  797522 ..  797544 +  -7.1   -4.9645   ATAGTGGAAGTGGCT           GAGTAGATT ATTTA AATCTGCTC           TTTTATTGTTGTGCT  88 37
JCR30_RS04290  798330 ..  798341 +  -3.6  -3.03124   AAAATAGCCGAAGAA                GCCT TAAT GGGC                 TCTTCGACAATAGGG  45 502
JCR30_RS04300 NONE
        dnaX  801042 ..  801065 +  -6.7  -2.60947   AAACTGAAATACATA          AGGGTAAGG TTTTGC CCTTACCCA           CGTTTTATCTCGTTA  57 40
JCR30_RS04310  801441 ..  801465 +    -8  -5.38054   TATTTTCTATAAAGG          TCACTTGTTT ATTAA GAACAAGTGA          TTTTTCTTTGTAAAC  93 140
JCR30_RS04320  804892 ..  804911 +  -7.9  -5.44119   TGACTATCAAGAGAA            CCTCAAG AATAAC CTTGAGG             TTTTTTTGAAATAAA  93 93
JCR30_RS04325  806578 ..  806606 +  -3.2  -5.64873   AATTTTATTAAAAAA        GTAGAGTGAG TGAAAAAAT CTTACTCTGC        TTTTTTGTTATTAAA  82 46
JCR30_RS04330  807992 ..  808009 +  -9.9  -5.48063   TAATCGAAGACTAAA             GAGAAGC TAAC GCTTCTC              TTTTTTATATTACAT 100 27
JCR30_RS04335  809216 ..  809233 +  -6.3  -5.00846   TAGCAAATGAAACAA             GGGAATC GAAA GATTCTC              TTTTTCTGATATTTA  83 54
JCR30_RS04340 NONE
JCR30_RS04345 NONE
JCR30_RS04350 NONE
JCR30_RS04355  813124 ..  813151 +  -6.4    -5.252   AAAGATAATAAGTCG        TGGAGTGAGAAA CTAT TTTCTTGCTTCA         TTTTTTATGAGGATG  85 47
        aroA NONE
JCR30_RS04365  815084 ..  815094 +  -2.6  -2.78738   AGGAAATAATCTTGA                 TTAT TCT ATAA                 TGATTAAAATTTTGA  42 129
JCR30_RS04370  816653 ..  816676 +  -8.2  -5.02074   AAGATATGGTATAAT          GGAGAGTAAC TAAA GTTGCTCTTC           TTTTTTGAGCAATGG  90 39
        rlmD  818203 ..  818219 +  -5.9  -3.09349   ATGAAGGTCTAGCTA              TTTAGCT TCC AGCTAAG              TGTGTCTATGCTTTC  57 152
JCR30_RS04385  819304 ..  819328 + -11.5  -5.46129   CAATAAAGGAAAAAA          GTCCCAACTCT CTG AGAATTGGGAC          TTTTTTCCTTTATTG 100 50
JCR30_RS04395  822535 ..  822559 +  -7.9  -5.07971   TGAGATAAGCAAAAA          GGTAAGCACTT AGG GATTGCTTACC          TTTTTGGTTCTTTTC  88 98
JCR30_RS04405  824036 ..  824049 +  -2.4  -3.66556   TTTTCTCTATTATAA               GCTT GATTGA AAGC                TTCTGTTACCAACTT  49 268
JCR30_RS04430  827645 ..  827689 + -15.4  -4.62054   TTGGACAAATAATTA TTGAAAGGATTTAGTTCTGT ATTGG ACAGGACTAAATCCTTTTAG TTTTGCTTTGATTCG 100 328
JCR30_RS04440  829357 ..  829368 +  -3.6  -5.44119   ATTAATGTAAGGAAA                CGCT GAAA GGCG                 TTTTTTTAAAGTAAA  79 31
        obgE  830734 ..  830758 +  -2.1  -3.31428   TAAGGCAATCCATTA          CAATAGCAGTG TGA TAGTGCTCTTG          TGTGTTATCTTTAAG  44 38
JCR30_RS04450  830936 ..  830958 +  -9.2  -5.16472   TGAAAAATTGAAAAA           GGATGAGG CTTAGGC CCTCATCC           TTTTTTGACCTTTTT 100 13
JCR30_RS04460 NONE
JCR30_RS04465 NONE
JCR30_RS04470 NONE
JCR30_RS04475 NONE
JCR30_RS04480 NONE
JCR30_RS04485  837708 ..  837721 +  -3.8  -4.20354   AGATAATTGTGTTAG               GCAG ACACCG CTGC                TTTTAAGGTTACCTT  59 154
JCR30_RS04490 NONE
JCR30_RS04495  839384 ..  839413 + -10.1  -4.62085   ATAACAGTAACCAAA       AAAGGCAAGGAGA TAGG TTTCCTTGCCTTA        TTATTTTTTGGAAGT 100 109
        uvrB  844680 ..  844701 +  -6.7  -2.73903   TAAAAAGGCATAAAA           CTTAACTGT CTAA ATAGTTAAG            CTTTAAAAAAATTTT  57 159
JCR30_RS04515  844932 ..  844946 +  -2.2  -4.11484   CATGGTCAAAGTAAC               TTTATT TAT AATGAA               TTTTAGGAGATTGAC  54 5
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
JCR30_RS04540  850523 ..  850580 + -18.1  -4.88918   ACTTTTTTGATATTC AAAAAGCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGCTTTTG TTTTATTTACGCTGA 100 279
JCR30_RS04565  856942 ..  856964 +  -4.2  -5.40474   TTAAGAGCAAAAAAA           GTAGCATTTT TAA GGAATGTTAC           TTTTTTTAGGAAACT  82 37
        malQ NONE
        glgP  860890 ..  860920 + -12.8  -4.41895   CATGCTTAAACTAAA       TTATAAGACAGTAG TTT CTGCTGTCTTATGA       TTTTACTTCAGACTT 100 78
JCR30_RS04590  863092 ..  863115 +  -6.8  -5.40004   TGTTAATTTGATAAA          CCG-CTTCTAT TTG ATGGAAGACGG          TTTTTTAATTTACTA  87 48
JCR30_RS04610 NONE
        pfkA  869426 ..  869436 +    -4   -3.3164   TAGACTTTGCAGCTT                 TGAA CCG TTCA                 TTGTCACAATAAGTT  49 3
         pyk  871038 ..  871060 + -10.7  -5.21709   AACTATTTACCTAAA           GGTTAGAAG GCAAG CTTCTAACC           TTTTTTGATATCAAA 100 50
        lepB  871780 ..  871805 +  -9.1  -5.71983   TTCGGATTTGTAGAA         GTAGAGTAGTT GTCA GGCTACTCTAC          TTTTTTTATAATTAG 100 17
        glmS  873797 ..  873819 + -12.8  -5.61881   ATTATAATGGATAAG           GCAACCATCT GTT AGGTGGTTGC           TTTTTGTTTTTAGGA 100 44
JCR30_RS04635  874320 ..  874338 +  -8.9  -4.03995   TCTAATAATAATACG             CAACCAG CTGAT CTGGTTG             TATTTTTATAAAAAA  82 36
JCR30_RS04640 NONE
JCR30_RS04645 NONE
JCR30_RS04650  876552 ..  876563 +  -5.8  -5.95539   ATTAAATCTTAAAAA                GGAC ACTT GTCC                 TTTTTTTGTTTAACA  93 29
         cfa  877936 ..  877969 +  -8.3  -5.54264   GTATTCTTAAAAAAA     TCCCTATGATCTGTT TAAA AACAAATTGTAGGGA      TTTTTTTAACTATTT  93 270
        pcrA  883594 ..  883628 + -13.1  -5.59564   AAAATAAGAAAAAAA     TGAGCTTCCTACT ATATAAGTG AGTAGGAAGCTCA     TTTTTTTAGATTTCT 100 34
JCR30_RS04675 NONE
        amaP NONE
JCR30_RS04685 NONE
JCR30_RS04690 NONE
JCR30_RS04695 NONE
JCR30_RS04700  886378 ..  886397 + -12.2   -4.8543   AGTGGTGATAAGTTT            GAGCTGGT ATTT ACCAGCTC             TTTTTGTCACGGTTA 100 68
JCR30_RS04705  887140 ..  887160 +  -9.8  -5.85737   CGAAAAGGATTATAA            GTTTGAGG GCCCA CCTCAAAC            TTTTTTTGTTGCTGT 100 26
JCR30_RS04715 NONE
JCR30_RS04720  891346 ..  891361 +  -4.8  -2.96695   TTAATCATATTATGG              TAGTAT TTAA ATACTA               TAATTTAATAGAAAG  52 77
JCR30_RS04725 NONE
JCR30_RS04730  892980 ..  893002 +  -3.4  -5.23316   TTCTTATCTATGACA           GCTTGGGA CTTAACT TCCTGAGC           TTTTTTGCTATAATA  74 56
JCR30_RS04735  894391 ..  894405 +  -4.3  -2.51173   AGGACCAGTAAGCCT               GAAAG TGAGT CTTTC               CTTGCTAAAATTGGT  47 30
        truB NONE
JCR30_RS04745 NONE
JCR30_RS04750 NONE
JCR30_RS04755 NONE
JCR30_RS04760 NONE
JCR30_RS04765 NONE
JCR30_RS04770 NONE
        pstC NONE
        pstA NONE
        pstB NONE
        pstB NONE
        phoU  904449 ..  904468 +  -9.4  -3.26546   ATATATGTAGACAGA            GATGATAC TTAG GTATCATC             TGTTGATCTATTATA  77 169
JCR30_RS04800  907061 ..  907082 +  -5.1  -5.31275   AGACCATAAGCAAAA           GAGTTGGGG GACT TTCCAGCTC            TTTTTTGTAGTGAGC  80 39
JCR30_RS04805 NONE
JCR30_RS04810  909510 ..  909535 +  -6.8  -4.97405   TAGCCAAGTTTTGCA         GCAAGGCGTG CTTTAT CGCGGCTTGC          TTTGTTTTTGTGAAT  83 166
JCR30_RS04825  911568 ..  911616 + -15.7  -3.29471   ATTAAGAAGTATAAA GCAAGCCTAATTTAAATAATCAA CAA TTGCTCATTTAAATTAGGTTTGC TTAATATAGTAAAGA 100 16
JCR30_RS04830  912644 ..  912654 +  -4.6  -4.42594   AATTTCTGTTATCTA                 GCCG TCT TGGC                 TTTATATTTACTTTC  64 49
JCR30_RS04835  913783 ..  913804 +  -7.2  -4.62336   GTTTAAGAACAAGAA           GCGCGACC TTTGTC GGTCGCTC            TTTTTAAACTGAGAT  80 42
JCR30_RS04840 NONE
JCR30_RS04845 NONE
JCR30_RS04850  917604 ..  917626 + -11.4  -5.00412   AGAATAGACTAAAAA           GAACTAAGTC AGC GGCTTAGTTC           TTTTTGCTTGTCTTT 100 177
JCR30_RS04875 NONE
JCR30_RS04880 NONE
JCR30_RS04885 NONE
JCR30_RS04890 NONE
JCR30_RS04895 NONE
JCR30_RS04900 NONE
JCR30_RS04905 NONE
JCR30_RS04910  929562 ..  929596 +  -4.2  -4.19371   CCTCGGTCTCTTTTA     GGAAAAATTGCTCGAA TAA TTCGAGCAAGCGCTCC     TTTCTTCCCGCTTTA  62 25
         cls  931378 ..  931398 + -12.7  -5.81622   TTAAGAATGCCCCTT            GGATTGAGA TAT TCTCAATCC            TTTTTTTAATTTTAT 100 179
JCR30_RS04920  931951 ..  931978 + -14.4  -5.56568   GGGATAAGGTTTAAA        TACCTAACAGAT AAAA ATCTGTTAGGTA         TTTTTTTGCTACTAT 100 74
JCR30_RS04930 NONE
JCR30_RS04935  935229 ..  935242 +  -8.1  -5.14965   TGAAATAACTATAAA               GCCGT TTTG ACGGC                TTTTTTGATGACAGT  90 117
JCR30_RS04940  936942 ..  936955 +  -5.3  -5.74122   CACCAACCAAAAAAA               GATGT GACT ACATC                TTTTTTTATCTAATG  86 152
JCR30_RS04945  938411 ..  938462 + -15.6  -3.42069   ACGAAAACAGTTAAA GAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTC TGTTATTCCCATTCA 100 13
JCR30_RS04955 NONE
JCR30_RS04960  942413 ..  942430 +  -8.5  -3.60048   AAAATAATTAGTAAA             GAAGTCA TTTA TGACTTC              CTTTTTTACACGAAC  77 30
JCR30_RS04965 NONE
         ffh  944418 ..  944437 + -10.8  -4.80882   AAAACGAAAATAAAA            GAGACGAA AATT TTCGTCTC             TTTTTGATGTGAAAT 100 28
        xerS  947155 ..  947166 +  -4.4   -3.6215   ATATTAGAGAATCAT                GAAG ACAG CTTC                 TTTAACATCAATTGG  55 406
JCR30_RS04985 NONE
        citC  949105 ..  949131 + -12.5  -4.93316   TACTAAGATAAAAAA         CCTATCTGATT ATCAA AATCAGATAGG         TTTTTGGTATTGTTC 100 35
JCR30_RS05035  957644 ..  957677 +  -5.4  -4.58663   TTCCTTATGAGATGA     TTAAAGTCATGTCC TTTTGT GAGCATGGCTTTAA      TTTTTCAGAACTCAT  71 65
JCR30_RS05040 NONE
        citG  959700 ..  959712 +  -4.1  -3.37761   TGAAACACCTGCTGC                TCCTA TCA TAGGG                TTCACTTTGTTACCA  50 391
JCR30_RS05095 NONE
JCR30_RS05100  970539 ..  970555 +  -5.9  -3.63991   GCTTAATGTGATGAG              TTGGTGT AAG ACATCAA              TTCTTAGAAGTGGTA  62 70
JCR30_RS05130  977494 ..  977507 +  -6.7  -5.48213   AAACTAATCACAAAA               GAGAC TTCG GTCTC                TTTTTGTTTTGCCTG  87 34
JCR30_RS05190  989439 ..  989458 + -13.6  -3.27475   AATCATAATGACCTT            CCCCCACT CCTT AGTGGGGG             TATTCTGCTAAAAAG  93 33
JCR30_RS05195  990463 ..  990477 +  -7.1  -5.37865   TGATCACAGAAAAAA               CGGCT CAATT AGCCG               TTTTTTAATTATTCA  89 66
JCR30_RS05225  997261 ..  997274 +  -3.9  -2.81281   ATCAGGCCCTTCCAT               TTTAG ATCA CTAAA                CTTGATTTTAAATAG  46 13
JCR30_RS05255 1002412 .. 1002433 +    -6  -5.09762   AATGGCTAAAAGCGA           CAGAAAAA CTGAAA TTTTTCTG            TTTTTCTGTTAAAAT  83 39
JCR30_RS05260 NONE
JCR30_RS05265 NONE
JCR30_RS05270 1005109 .. 1005126 +  -7.1   -5.1101   ATACTATTATATAGT             GCTAAAA CTAA TTTTAGC              TTTTTTAACTCATAC  88 155
JCR30_RS05275 NONE
JCR30_RS05280 1006707 .. 1006721 +  -2.8  -3.45027   TAAAGCAATAATCGT               TAGAAC TAG GTTCAA               TATTTCCTGAAGGAT  48 152
JCR30_RS05310 1013122 .. 1013168 + -19.3  -3.64371   AATGATATTAGCTAA TCACAAAATAAGTAGAAGC-TA GAAA TATGCTTCTACTTATTTTGTGA TTTAAAGTATAACTT 100 26
JCR30_RS05325 NONE
JCR30_RS05330 1018103 .. 1018121 +  -7.4  -4.60255   TCGATACATTAAAAA             GGCTGG AGAAATA CCAGCC             TTTTTGAGGGCTTAT  82 50
JCR30_RS05385 1027897 .. 1027928 + -13.3  -5.73672   ACTGTAAACTAAAAA      GACAGTTATGAAA AAATTC TTTCATAACTGTC       TTTTTTTGATTGTTT 100 73
JCR30_RS05405 NONE
        mnmE 1033192 .. 1033214 + -16.4  -4.82667   CTAATCATCACAAAA           GAGCTGGAAC ACT GTTCCAGCTC           TTTTTGCTGTCATAA 100 50
JCR30_RS05535 NONE
JCR30_RS05540 1060837 .. 1060869 +  -5.7  -4.76171   GTCATCAAACAAAAA     CTCCTAAGTAGGAC ACGATA GTTC-GCTTAGGAG      TTTTATAGTTTTTTC  74 54
       fbp54 1081311 .. 1081348 +  -7.7  -5.89921   TAAGCAACTAAAAAA   CAGCTCTCCTAGGAAAG TTAT TTCCCCTAGGAGAACTG    TTTTTTTATTCTGAT 100 41
JCR30_RS05710 1099185 .. 1099212 +  -3.3  -5.20216   TGGATCAATTTAAAA        GAGACTAGCAC ATTAAA GTGCCGGCCTC         TTTTTTAGTAATCTC  71 49
JCR30_RS05735 1102967 .. 1102982 +  -2.6  -5.43487   AAAGAAACAAAAAAA              GCCT-AT CAA ATAAGGC              TTTTTTATATGATTT  76 354
        plsY 1112498 .. 1112522 + -11.5  -5.80951   ATAAATTTACTAAAA          GCCTGACTTTC TCT GAAAGTCAAGC          TTTTTTGTTTTAACT 100 37
JCR30_RS05830 1121390 .. 1121425 +  -2.5  -5.17353   GTCATACTAAAAAAA    CACGGTAGTAAGACC TGTATC GGTCAAGTTATCGTG     TTTTTTGATAAATAT  69 55
JCR30_RS05865 1129338 .. 1129370 +  -3.3  -4.05085   CAAAACATGAAAAAA      TCCGTCTTGTGACTA CGT TATACACTTGACGGA      CTTTTTTTTAGCGCT  55 66
JCR30_RS05900 NONE
JCR30_RS05905 1136494 .. 1136524 + -17.1  -4.10269   CTAATATAAGGCAAT       CACCCATGTAAAC AATTG GTTTACATGGGTG       TTTAATCTTTGTTTC 100 51
JCR30_RS05945 1145702 .. 1145728 +  -4.4    -3.737   TGCTGGCATATTTGA         GCAGTTAAGCCT GTT AAGCTTAATCGC         TTTGGTCGCCAATTA  56 155
JCR30_RS05985 1154192 .. 1154224 + -19.5  -4.44046   AAAGTAAAACTAAAA      GGATTTAGTTCTGTA TTG TACAGAACTAAATCC      TTTATTTAAAATAGA 100 499
JCR30_RS06050 1165873 .. 1165927 + -28.4  -5.12707   ATTAAGAGCACCTAA TAAGCATACCCCTTTTTACAACATAG TCA CTATGCTGTAAAAAGGGGTATGCTTG TTTTTTAGCGTTTAA 100 89
JCR30_RS06165 NONE
JCR30_RS06170 1194032 .. 1194043 +  -4.4  -4.09015   CACAGTAGCAACGTT                TTGG TAGT CCAA                 TTTCTCGTCTGTTTT  61 455
JCR30_RS06200 1201110 .. 1201133 + -11.2  -5.45652   TTAATGATCTGACTA          GAAGCAAAAT AATA ATTTTGCTTC           TTTTTTATTGGCGAT 100 46
JCR30_RS06230 1204150 .. 1204171 +  -6.6  -5.32882   TCTTGCCCAACTAAA           GCTCTTAC CCTCGA GTAAGGGC            TTTTTTATCATGCTG  85 8
        mscL 1224504 .. 1224524 +  -6.9   -5.8096   GATAAAAAATAAAAA            CAGTTCTAA TTG TGAGAACTG            TTTTTATTTTTTATC 100 115
JCR30_RS06345 1233765 .. 1233789 +  -7.9  -5.58179   ACACTTAGAAAAAAA          CCAGACAAGTG CTG TGCTTGTTTGG          TTTTTTCTTCTAATA  93 68
JCR30_RS06510 1268639 .. 1268657 +  -8.9  -3.63627   AAAAGCTAATAAAAA             GTCGTGA GAATA TCACGAC             TTTCAAGTATCAAAA  77 129
JCR30_RS06555 NONE
JCR30_RS06560 1278650 .. 1278668 +   -11  -5.46706   AGACAATACAAAAAA             CCTTCCTG TAT CAGGAGGG             TTTTTCTTTTGGCCT 100 44
         mf2 1285083 .. 1285105 +  -4.3  -3.90112   CTTACTGCTATTTCA          TGTATT-CTC GTAC GAGTAATACA           TTTAATTAAGGAGAA  59 95
        speC 1285850 .. 1285871 + -10.1  -4.76963   ATCATACACAAAAAA           CCGCCCAGA ATAA TCTGAGCGG            TTTTGTCTTATCTCG 100 44
JCR30_RS06720 1311562 .. 1311588 +  -4.7  -3.40066   CGTTTAACAAGAAGC        CACA-TTTATAT AACA ATATAAAATGTG         TTAAGTTATTTTATT  55 340
        mobC NONE
JCR30_RS06785 1325609 .. 1325635 +  -8.1  -5.40072   AATTTATATGGGTAA         GGAGATGGAGA GATAA TCTTTATCTCC         TTTTTTTGAGCAACA  93 10
JCR30_RS07045 1371271 .. 1371296 +  -4.7   -4.9792   CGGTTTTTATCAGTT         CAGGGTCTATC TTAT GATAGGCTCTC          TTTTTCTCTCCGCTA  75 56
JCR30_RS07060 NONE
JCR30_RS07065 NONE
JCR30_RS07070 1374848 .. 1374862 +  -4.3  -2.57013   AATAAAACAAAATAC               CCAAA CATAT TTTGG               TACATTACCTTGAAA  47 231
        recX NONE
JCR30_RS07085 1377681 .. 1377708 + -12.8  -3.60925   TTCGTTGTGGTAAAA        GTGGCGTCAATG TTAG TGTTGACGCCAC         TTGGTATTTTTGAGC  95 178
JCR30_RS07165 1388603 .. 1388637 +  -5.2  -4.59376   CATCAACAAAAGTGA     TATGGCTTTATTATCA GAG TGATAGTAAATCTGTA     TTTTACTTTAATAAT  71 42
        cysK 1389660 .. 1389688 +  -8.2  -4.94672   AGACGAAATAAAAAA        GGGTTTGGAACT ACTAA GGTTCCAGACTC        TTTTTAGTGTTCTTT  90 30
JCR30_RS07245 NONE
JCR30_RS07250 1407393 .. 1407406 +  -5.9   -4.2123   CAACCTGTTAGTATT               GCTCC TGGA GGGGC                TTTCTTCGATAGCTC  69 279
JCR30_RS07260 1408629 .. 1408661 +    -5  -4.46212   ATAAATTTGGAGAGA     TAAAGAGGCTGTATC TTGT GAT-CTGTCTCTTTA      TTTTCTAATAAGGAG  69 37
JCR30_RS07265 NONE
JCR30_RS07270 1410682 .. 1410705 +  -8.2  -5.81622   TTATTAATCAAAAAA          CTGAGACAAG TTGC CTTATCTCAG           TTTTTTTGATTTTCT 100 132
        recU NONE
JCR30_RS07305 1417697 .. 1417723 + -10.8  -4.96848   TAATCTAAATAAAAA         GCGAGTCCACGT TCT GTGAGGACTCGC         TTTTTATATGACACA 100 120
JCR30_RS07485 1458988 .. 1458998 +  -6.8  -5.75342   ATTTCTTCTATCAAA                 GCAG AAA CTGC                 TTTTTTTTGACCACG 100 356
JCR30_RS07495 1460463 .. 1460519 + -16.4  -4.62069   GGCTGCTATGGGCTT GCCT--CTATTAACGTAAAAAGGTTCCT TTT GGGAACCTTTTTACGTTAATAGTTAGTC TTTTTGAGCTGCAAG 100 10
JCR30_RS07545 1468185 .. 1468195 +  -2.4  -4.37486   GCAAAAGTGATTTGC                 CCCC AGA GAGG                 TGTTTTTGTTTTGCT  57 95
JCR30_RS07565 1472382 .. 1472400 + -10.3  -5.97575   AATAATTCCTACCTG             CCACCAG TTAAT CTGGTGG             TTTTTTTTGTAGCTT 100 45
JCR30_RS07625 NONE
JCR30_RS07630 1482797 .. 1482822 +  -9.1  -5.47159   TTATTTGAAATCACA         GACAGCTATCA TCTT TGATACCTGTC          TTTTTTATATTCAAA 100 61
JCR30_RS07655 1487826 .. 1487849 +    -9  -4.06864   TAGTAGCAAACGAAA          CCACTATTTT TCAG AAAATGGTGG           TTCTTCTTCTGTCAA  82 38
        manX NONE
JCR30_RS07665 NONE
JCR30_RS07670 1490994 .. 1491018 + -10.8  -5.43621   TGTAATCAACCAATG          GAAGTCTGAG ATGAA CTCAGGCTTC          TTTTTTATGCTTTAT 100 36
JCR30_RS07675 1491737 .. 1491751 +  -2.8  -3.36564   GCCAAAGCGCTCCAG               CATCTT CAT AAGCTG               TGCTTTTTCTATCGT  47 306
        serS 1493134 .. 1493163 + -13.7  -4.07678   TAAATAATAAACTCA       CCCCAGAGATCAT TAAA GTGATTTCTGGGG        TTTACTATTTTAAAG 100 34
JCR30_RS07830 1520619 .. 1520634 +  -3.9  -3.64192   GCTAAGGCATCAACT              TGCCC AATCAG GGGCG               TTTCAACATGTTTTT  54 407
JCR30_RS07840 1522797 .. 1522838 + -16.2   -2.9587   ATAATCTAGCTTCCT GTAGAAATGTCCCACTAA AACATA TTAGTGGGACATTTCTAG  TACTTTAAGCTTTAA 100 37
JCR30_RS07950 NONE
JCR30_RS07955 1557431 .. 1557489 + -21.5  -3.15699   CAATCACTAATTACT CTAAAAGACAAACAAGCATACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTCTTTTAA TATTCGTACATAACT 100 53
JCR30_RS07990 1564795 .. 1564806 +  -2.2  -3.02745   CTGTGTCAAACGACT                GGCT CCAA AGTC                 TCATTTGTCACTAGC  42 83
JCR30_RS07995 1565538 .. 1565558 +  -6.9   -4.6038   ATAACAATCATTTCA            TCCTTGC TATCTAC GCAAGGA            TTTTCGTTTACTCTC  80 37
        mutY 1568659 .. 1568677 +  -5.3  -5.29846   AATGCTTAATCACAA             GTGAACT ATGAC GGTTCAC             TTTTTGTTTACAATT  82 32
JCR30_RS08025 1569429 .. 1569467 +   -17  -3.09933   TGAAGTTAGTAGATA   ATAAAATAAAGCTCAGCG TGA CGCTGGGCTTTATTTTAG   TTAACTCAATTCAGC 100 38
JCR30_RS08055 NONE
        lepB 1575381 .. 1575396 + -10.4  -4.35874   TTTAATTAGAAAAAA              CCTGCC TTTG GGCAGG               TTTTCAGTTATCTTG 100 32
JCR30_RS08065 NONE
JCR30_RS08070 1578476 .. 1578507 + -20.4  -5.24531   AAATAATGGACCAAA      GAAGCTGATTAGGG AAAT CCCTAATCAGCTTC       TTTTTTCTCCAAAAT 100 43
        pflB 1582214 .. 1582253 + -15.3   -5.1925   ATAACTTATAAAAAA  GAACAGCCATCTCATTT GATTCA AAATGAGATGGCTATTC   TTTTTTCACTTATAA 100 58
JCR30_RS08095 1585248 .. 1585275 +  -4.9  -4.98616   AAATAGATAAGATAA        CGTTTCTGG GAATCACTAA CCAGAGACG         TTTTTAATATTTTAC  75 31
JCR30_RS08110 NONE
JCR30_RS08115 1591233 .. 1591256 +  -6.8   -5.5604   AATTAACAAAGAAAA          GTGCTTAG CAATATAA CTAAGCAC           TTTTTTGTTAATTGG  87 35
JCR30_RS08125 1592215 .. 1592227 +  -3.5   -2.8499   TTTTATTGCCTCTTT                TTATA TGT TATAA                TAGTTAGTATTAAAT  44 172
JCR30_RS08130 1592572 .. 1592597 + -12.7  -5.66684   CTAAAAAAACAAAAA         CTAGCTTGAGA AGGA TCTCAGGCTAG          TTTTTTTATGAGTTA 100 37
JCR30_RS08150 1596053 .. 1596077 +  -9.4  -4.70266   TTCATAGCTAAAAAA          GCCTATTATC ACTAA GATAGTAGGC          TTTTTAACTCCTATT 100 34
JCR30_RS08170 1599872 .. 1599887 +  -4.7  -2.84265   ATTAATACCTGACTC              CCACA CTTAGA TGTGG               AGTTTTTTGATATTA  51 57
        rpsN 1600418 .. 1600445 + -14.3  -5.00616   TACTTATCATCATGA        CAACCCGGTAT GCCAAG ATACCGGGTTG         TTTTTTCAAAGGGAG 100 113
JCR30_RS08195 NONE
JCR30_RS08200 1604920 .. 1604958 +   -12  -4.57353   CAGATAATTATCAAA   CTAAAAACCAGTCC TCATAGAACAT GGACTGGTTTTTAG   TTTTCTATAATGGAA 100 103
JCR30_RS08280 1621506 .. 1621553 + -10.3  -3.71649   TATAATCTTAAAAAA TCCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGGG TTTAGGATTTACGGA  87 41
JCR30_RS08345 NONE
JCR30_RS08350 NONE
JCR30_RS08355 1637744 .. 1637772 +  -8.9  -4.90525   TAAAAGACAAAAAAA        CACCACAGTAG ATGATTA CTACTGTGGCG        TTTTATTTAAAATTG  95 38
JCR30_RS08425 1654246 .. 1654256 +  -3.2  -5.02074   TTTGAGAATTGTGAA                 GCTT TAC GAGC                 TTTTTTAAGACCTGG  68 418
JCR30_RS08430 NONE
JCR30_RS08435 1655126 .. 1655147 + -10.9  -5.18357   AATAACACGTTAAAA           GCCTTAGCA GTCT TGCTAGGGC            TTTTTTGGTAGATTA 100 36
JCR30_RS08440 NONE
JCR30_RS08445 1656644 .. 1656661 +  -4.2  -5.45652   TAAGTCAGCATGTGG             GATGTA TTCTTC TACATC              TTTTTTGTTAACAGT  82 421
JCR30_RS08550 1673637 .. 1673653 +  -6.7   -3.0558   AACCACTATCTGACT              TTTCTTT AAA AAAGAAA              TGATTTGTGATATAG  59 61
JCR30_RS08555 1674325 .. 1674336 +  -3.6  -5.85737   AGACTAACAAAAAAA                GGCT AAAG GGCC                 TTTTTTTGTTAGTCT  90 34
         ska 1695763 .. 1695792 +  -5.1  -5.26918   TAACTGACAAAAAAA       GCAAGCAAC ACGCTATCAACA GTTGCTTGC        TTTTTTCTAACCTCT  80 66
        nrdI 1700569 .. 1700614 + -18.6  -3.29273   GGTTACTGACATGAC TAAAGAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTCTTTG TGTTCTCCTAATCCC 100 291
JCR30_RS08675 1708658 .. 1708691 +  -3.7   -4.5265   CGTGGCCAAAAGACA     GTTGTTGCCTGTTCT CATT AGGCCTGGCAACCGC      TTTTATGATATAATT  65 156
        pabB NONE
JCR30_RS08685 NONE
JCR30_RS08690 1712393 .. 1712407 +  -7.2  -2.50479   TTTAAAAATCGCAAC               CGATTT CAA AAATCG               ATAATTTTGCTTGAA  60 49
        ssrS NONE
JCR30_RS08700 1712748 .. 1712761 +  -5.3  -3.99187   CTATACATGAAAAAA               CCTTT GTTT AAAGG                CTTTTTTTGCTTGTC  63 44
JCR30_RS08705 NONE
JCR30_RS08710 1713923 .. 1713938 +  -7.6   -5.4148   CTATTCAGACTGAAA              GCCTTT GTTT AAAGGC               TTTTTTGCTTGTTTC  93 79
JCR30_RS08715 NONE
JCR30_RS08720 NONE
JCR30_RS08725 NONE
JCR30_RS08730 NONE
JCR30_RS08735 NONE
JCR30_RS08740 1720564 .. 1720595 + -11.2  -4.47007   AACAAAATCACACCA      TTAAAAAA-CCAGCT TAC AGCTGGTTTTTTTAA      TTATTTTAATTTTTC 100 74
JCR30_RS08820 1741508 .. 1741543 + -18.5  -5.53991   CTATCACTGATACCA    TTCACGCTAAGCCTC ATTCTA GGGGCTTAGCGTGAA     TTTTTTTGCTGACTG 100 78
        ropB 1746437 .. 1746459 +  -6.3  -5.02715   GAGGCTCTTTAAAAA           GCTAACGCT CTTAT GGTGTTAGC           TTTTTGATTTGGTAT  84 39
JCR30_RS08855 1748359 .. 1748387 + -14.7  -5.48303   CAACAATAAGTAAAA        CAAGTCTAGGAAG TGA CTCCCTAGACTTG        TTTTTTTGAGGTTAT 100 32
JCR30_RS08900 1757890 .. 1757929 + -14.6  -3.31625   TGCCTTTACCTTTAT  GCTTTTTTAAAGCTCAAA CCAG TATGGGCTTTAAAAAAGC   TTACTAATTAGTTTA  95 129
JCR30_RS08925 1762727 .. 1762763 + -19.7  -4.34859   ACGCAGTCTTAAACG    CTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAG    TTTATCTGTTTTCAT 100 6
JCR30_RS08935 1766288 .. 1766308 + -14.1  -3.39327   GAAGTCAAAAAATAA            GGTCTCACA CTT TGTGAGACC            TTATCGGTATAGGAG 100 92
        ahpC NONE
        ahpF 1775968 .. 1776013 + -10.7  -5.02074   GTCAATAAAACAGCA TATTTAAAAGAAGTTTTGAGC TAAC GCTCAAAGCTTCTTTTTGAAA TTTTTTAAAGAATAC 100 33
JCR30_RS08990 1779626 .. 1779650 +  -2.1  -3.21199   CTAGATAAAAATGTA          AGCGTTATCTA TAA TAGGTAACCCA          TTCCCTTAATGAGTA  44 47
        ftcD NONE
JCR30_RS09000 NONE
JCR30_RS09005 NONE
JCR30_RS09010 1783549 .. 1783572 +  -3.9  -3.80733   TTAGTGGGATAAAGA          TAGGCATCA CACTAC TCATGCCTA           TTCTTCTCCAATGAA  55 37
JCR30_RS09015 NONE
        hutH 1786679 .. 1786704 +  -7.5  -3.61178   ACTTCTTTAACTAGA         GGGGCTGTGGC AGAG GTCATGGCCTC          TTTAGACTAACTAAC  71 51
JCR30_RS09025 1787854 .. 1787875 + -10.2  -4.48175   GCAACATAGATAAAA           CCCTCTGA TTCACT TCAGAGGG            TTTTCCTTAGCTTTT 100 54
        rpsB 1793134 .. 1793150 +  -7.3  -3.57144   GTTCCTAACTCTTAT              GGCAAAC TTC GTTTGTC              TTTAACAATCGAAAA  68 51
JCR30_RS09045 1794310 .. 1794335 +  -7.6  -5.24796   GATAAGTCTAAAAAA         GGCAACCTTC TTTCCT GAGGGTTGTC          TTTTTGTTGTGTCAA  89 53
        treR 1801207 .. 1801225 + -13.2  -3.96867   TAAAGACAGAAAAAA             GCCTTGCA AAA TGCAAGGC             TTGCTTTTCTTTTTC 100 38
JCR30_RS09075 1802762 .. 1802772 +  -5.4  -3.90744   CTAGCTATTTTACAA                 GAAG ATT CTTC                 TTCTTTCACGACAGA  63 47
        yaaA 1803598 .. 1803611 +  -8.1  -5.34055   GTCTATATCAAAAAA               GAGGC CTAG GCCTC                TTTTTTAGTCTTTAT  90 17
JCR30_RS09185 NONE
JCR30_RS09190 NONE
JCR30_RS09195 NONE
JCR30_RS09200 NONE
JCR30_RS09205 NONE
JCR30_RS09210 NONE
JCR30_RS09215 1827602 .. 1827615 +  -3.1   -3.6947   GACCCTTGATATATA               TAGCT TTAT AGCTG                TTATGTTGACCTTGT  50 143
JCR30_RS09220 NONE
JCR30_RS09225 NONE
JCR30_RS09230 1828717 .. 1828730 +  -8.1  -5.10601   TTAAATAAACAATCA               GAGGG TTTT CCCTC                TTTTTGTCGTTTTAT  90 33
JCR30_RS09235 1829285 .. 1829306 +  -2.9  -2.55545   AATATTCGGAAACTA           CCCCCTTCA TTTT TAAACGGGG            CTATATTGTTCGGAA  41 39
JCR30_RS09240 NONE
JCR30_RS09245 NONE
JCR30_RS09250 1831361 .. 1831374 +  -6.7   -5.4756   ACTCATTGTGTAAAG               GACCT GTAA AGGTC                TTTTTTGTTCACCTT  87 132
JCR30_RS09270 1836972 .. 1837001 + -11.6   -5.5208   TAAGTAATAACATTA       CTAAGGCTGTCA CATTTA TGACAGTCTTAG        TTTTTTATATTATAA 100 38
JCR30_RS09275 1837359 .. 1837378 +  -7.2  -5.40464   GGACCAAAATAAAAA            TACAGGTT GTTT GACCTGTA             TTTTTATTTATCATA  93 29
        rpmF NONE
        rpmG 1844212 .. 1844244 + -17.2  -4.36903   TTTGGATATTGAAGT      TAAGCCCTGTCATC ATTTG GATGGCAGGGCTTA      TTTATATTTGGTACA 100 175
JCR30_RS09315 NONE
        cadX NONE
JCR30_RS09325 1846322 .. 1846340 +  -5.3  -3.54459   CAACGTGGATTATTC             TTCCCTT GGAGA AAGGGGA             TTTCAGAACGCTTGG  59 61
JCR30_RS09335 1847982 .. 1848007 +  -6.9  -5.32699   ATTGAGATGAGAAAA         GCCTATGAAAT GAAC GTTTCAAAGGC          TTTTTTCGTGTTTAA  89 305
JCR30_RS09350 1849807 .. 1849834 + -11.4  -5.29846   ACTAGTGCTCTATCT        CCCCTTAGATTT TTCA ATATCTAAGGGG         TTTTTCTTTGCAATT 100 78
JCR30_RS09360 NONE
JCR30_RS09365 NONE
JCR30_RS09370 1852690 .. 1852719 +  -7.9  -6.10489   AAATAAGACAAAAAA       CAGCATCTAGTGT AACT GCCTTAGATGCTG        TTTTTTTTTGAGGTT 100 90
JCR30_RS09380 1855801 .. 1855815 +  -8.6  -4.94992   TGAGATACAAAAAAA               GCCTAT TAA ATAGGC               TTTTTGTAAGTTTAA  95 143
       sdaAB NONE
       sdaAA 1867826 .. 1867863 + -14.5  -4.17556   AGACAATTAAATACC   AAAAACCTATTGTTAGT AAAT ACTAACAATAGGTTTTA    TTTCTTCCAGCTATG 100 381
        hasA NONE
        hasB 1879597 .. 1879609 +  -4.8   -2.5955   CGTTCTGAAAACGAA                TGGC ACTAA GCCA                TAGATTATAAAAAGT  50 167
        hasC 1880785 .. 1880801 +  -2.3  -4.28049   ATGATACTTTATAGA              TAGCT CTTATTC AGCTA              TTATTATTTATTTCT  57 259
        yaaA NONE
        recF 1882395 .. 1882413 +  -9.6   -5.6473   ATAACATCAAAAAAG             GGTTCAGT TAA ACTGAGCC             TTTTTTTGATGTTAT 100 40
JCR30_RS09520 NONE
JCR30_RS09525 1889323 .. 1889346 +  -9.6  -4.18259   TATGATAAATGAGGT          GGCTAAGAAG ATCT CTTCCTAGCC           TCTTTTTTAAAATTT  93 46
JCR30_RS09530 1892011 .. 1892061 + -12.2  -2.78495   AATGAGTCAATATAC TAAAAGCATCTCAAGAGCTAGA TAAATAT TCTAATACTTGAGATGCTTTTA TCGATTTTACTAATA  84 75
JCR30_RS09550 1893984 .. 1893998 +  -6.4  -5.88197   ATCAAAGATAAAAAA               GCACTG TTT TAGTGC               TTTTTTTGTATTTAC  95 36
JCR30_RS09560 1896076 .. 1896104 + -17.7  -4.55093   TATTACATTTTATCA        CATAAAACAGTCC AAA GGACTGTTTTATG        TTTCTTATTCTATCC 100 58
JCR30_RS09565 1896884 .. 1896924 + -24.5  -6.04324   TGATGATGAATTAAA  CAGAATTATCAACAAGCTA CTT TAGCTTGTTGATAATTCTG  TTTTTTCTTTTTTAG   0 1
        rlmH 1893984 .. 1893998 -  -5.7   -5.5762   ATCAAAGATAAAAAA               GCACT GTTTT AGTGC               TTTTTTTGTATTTAC  84 156
JCR30_RS09540 1892544 .. 1892558 -    -5  -6.20267   GGAAAAAGAAAAAAA               TTGCCA AAA TGACAA               TCGCGATAGTCCGTA  95 29
JCR30_RS09535 1892427 .. 1892445 - -10.4  -5.99154   TACTAAATAAAAAAA             TCCTAAGA TTA TCTTAGGA             AATATCTTATCACTC 100 37
        trpS 1885181 .. 1885199 -  -3.2  -4.53777   TTTAATCAAAAATAA             GACTATAT AAA ACATAATC             TCTACTATCCTGTAA  62 117
        guaB 1883457 .. 1883479 -  -6.2  -5.80817   TTTAATATAAAAAAA           GAGCTGGCAC AAT ATGTCAGCCC           TTAAAGTTACTAAAT  93 48
JCR30_RS09505 1882381 .. 1882427 - -18.4  -3.20382   TCTGATATTCACTAA TAACATCAAAAAAGGGTTCAGT TAA ACTGAGCCTTTTTTTGATGTTA TGTGGCGATTAAGAT 100 34
JCR30_RS09470 NONE
JCR30_RS09465 NONE
JCR30_RS09460 NONE
        pgsA 1871334 .. 1871346 -  -2.7  -2.66272   TGTTATTTAAACGTA                TCCTT AAA AAGAA                AGCTTGCTCCTTTAA  41 0
JCR30_RS09450 NONE
JCR30_RS09445 NONE
JCR30_RS09440 1868785 .. 1868825 -  -9.2  -4.84642   CTCAAATGAAGAAAA  GTACCTCAATCATTAGAT GTTGT ATCTAACTTTTGAGGTAC  AATTCATTTCTTATA 100 69
JCR30_RS09435 1867831 .. 1867858 - -14.4    -4.946   ATTAAATACCAAAAA        CCTATTGTTAGT AAAT ACTAACAATAGG         TTTTATTTCTTCCAG 100 51
        mnmA 1864361 .. 1864371 -  -2.6  -4.60889   AACTATTTTTAAAAA                 TAAT GTG ATTA                 TATTTAAAATATACA  60 150
JCR30_RS09415 NONE
        mnmG 1861328 .. 1861344 -  -5.8  -5.34555   TTATACCATAAAAAA              GCCCTG AAATA CAGAGC              TTCCACTTGCTTTGA  84 61
JCR30_RS09405 NONE
        rplI NONE
        dnaB NONE
JCR30_RS09390 1857161 .. 1857173 -  -9.1  -5.28942   TATTGTAAAGAAAAA                GCCTC TAT GAGGC                AAAAATCAATCTAAA 100 31
        rpsD 1855801 .. 1855815 -  -8.6  -5.76633   TGAGATACAAAAAAA               GCCTAT TAA ATAGGC               TTTTTGTAAGTTTAA  95 49
JCR30_RS09375 1852647 .. 1852665 -  -7.5  -5.64304   CAAGACAATAAAAAA             CTTGACA GAAAT TGTCAAG             TTATTGTCAAAATAA  93 102
JCR30_RS09355 1849778 .. 1849789 -  -4.4  -4.82901   GGTTGTTGACAAAAA                GTTG ACGC CAAC                 AAACTAGTGCTCTAT  70 37
JCR30_RS09340 1847982 .. 1848007 -  -6.2  -4.51378   ATTGAGATGAGAAAA         GCCTATGAAA TGAACG TTTCAAAGGC          TTTTTTCGTGTTTAA  74 195
JCR30_RS09300 1842117 .. 1842154 - -11.5  -4.83243   CTTACAGAAAACAAA   CAGGTGCAACTCC-CTTC TAA AAAGAGAAGTTACACCTG   TTTTAGTGATTATCT 100 86
        aspS NONE
JCR30_RS09290 NONE
JCR30_RS09285 NONE
JCR30_RS09280 1837353 .. 1837384 - -11.9  -4.25283   AGTGGGGGACCAAAA      TAAAAATACAGGT TGTTTG ACCTGTATTTTTA       TTTATCATAATTTCT 100 23
        argR 1834303 .. 1834318 -  -3.2  -2.65409   TAATCATCAATTAAT              GGCTGA TGAC TGAGCC               TATCTTCTAGTTCTT  43 247
        mutS 1831603 .. 1831626 -  -7.5  -5.24796   TTGACAGAACAAAAA          GATGCCTTC AATATA GAAAGCATC           TTTTTCATTTTCAGC  89 48
JCR30_RS09180 NONE
JCR30_RS09175 NONE
JCR30_RS09170 1820528 .. 1820549 -  -5.9  -3.86015   GAGTTCTTTGACAAA           GTTAGCTTA CTAG TCAGCTAAC            AAAATACTTTACATT  65 153
        mutL NONE
JCR30_RS09155 NONE
        ruvA 1815394 .. 1815407 -  -5.3  -2.53641   GAACCCATGAGCAAC               GTTTC ATGT GAAAC                ACCTACCCTTTCATT  51 28
JCR30_RS09145 1814821 .. 1814847 -  -8.9  -5.15634   TATTTTATCAAAAAA         TCTTCCAATTC ACGAA GAATTAGAAGA         TTCTATTGAAAACAC  95 18
JCR30_RS09140 1813455 .. 1813470 -  -2.6  -3.23216   CGTCAGCAGGATTAA              TCTACA TAAT TGTAAA               CCATATCCTACTATA  45 55
        recA 1812258 .. 1812269 -  -7.2   -4.6644   AATACATTTTAAAAA                GCCC TGAA GGGC                 TCTTTTTAATCTTCA  83 31
         spx 1811571 .. 1811583 -  -7.7  -5.47821   AGGTATTTAAAAAAA                GCTCT ACA AGAGC                TTTTAGAGCGCAGCA  93 28
JCR30_RS09125 NONE
        ruvX NONE
JCR30_RS09115 1810430 .. 1810444 -  -5.7   -5.6473   ATAACATTAAAAAAA               TAGCC CTCAC GGCTA               CTTTTTAACATAGTG  86 52
JCR30_RS09110 1808448 .. 1808491 -   -10  -5.68023   CGACAACTAAAAAAA TCAATATATTGTG-TCAAG TTTTTTG CTCGAACACAATATATTGA TATTAAATTACTTTT 100 33
        nrdD 1806129 .. 1806159 - -10.7  -4.06533   GAAACCATTAAACAA       TAAAAGATTGCTT GCATG AAGCAACCTTTTA       AGCATATCATATTTC  93 70
JCR30_RS09100 NONE
JCR30_RS09095 1804909 .. 1804925 -  -3.7  -3.26471   TTATTTCCATATCAA              TTCCTAA TCC TTAGGCA              ACTCTACCGTTAACT  49 12
JCR30_RS09090 NONE
        nrdG 1803598 .. 1803611 -  -8.1  -5.21709   GTCTATATCAAAAAA               GAGGC CTAG GCCTC                TTTTTTAGTCTTTAT  90 194
JCR30_RS09070 1801207 .. 1801225 - -13.2  -5.51046   TAAAGACAGAAAAAA             GCCTTGCA AAA TGCAAGGC             TTGCTTTTCTTTTTC 100 273
        treP 1798200 .. 1798228 - -11.2  -3.63744   TTCCTCCCTAAAATA       GTTTCAGGAACTG ATCT CAGTTCCTGAA-C        GTTTTCTCTTAGTAA  90 43
        treC 1796515 .. 1796553 - -16.2  -3.28712   CTTTTTTCGTGACAA   TCACCAAAAGCCTGAGGC CTA ACCTCAGGCTTTTAGTTA   GTTATCAGCTAAAAT 100 23
        pepO 1794378 .. 1794402 - -13.7  -5.32565   TAAGGAAGCAAAAAA          CTGATCCTGTG TTT CACAGAATCAG          TCATTTTTATAATCA 100 71
JCR30_RS09030 1787854 .. 1787875 - -10.2  -4.68124   GCAACATAGATAAAA           CCCTCTGA TTCACT TCAGAGGG            TTTTCCTTAGCTTTT 100 32
JCR30_RS08985 1775977 .. 1776004 - -11.4   -4.2535   ACAGCATATTTAAAA        GAAGTTTTGAGC TAAC GCTCAAAGCTTC         TTTTTGAAATTTTTT 100 39
JCR30_RS08970 1773317 .. 1773353 -    -6  -5.75538   CGCAAAAAATAAAAA   CCTTGATTTAACAACGT TTTC ACGAAGTTAA-TCAAGG    CTTGTTTTGTATATA  88 39
JCR30_RS08965 1772611 .. 1772634 -  -9.6  -5.42514   GTAGAAATCAAAAAA          GCAGTTGTTG TTTC CAACATCTGC           TTCTCTTTAGTTACT 100 50
JCR30_RS08960 NONE
JCR30_RS08955 1769415 .. 1769443 -  -9.8  -3.75015   AGAATCTTTAGTAAA       GTTAGCACTC-AT GTTC ATCGAGTGCTAAC        TTTATATTCTATTTT  83 140
       groES NONE
        groL 1767314 .. 1767350 -  -7.4  -5.68023   TCACAACTAAAAAAA    CAAAGATGGGATATCA TGAGT CGAAATCCAATCTTTG    TTCTTTTTTCATAGT  93 98
JCR30_RS08940 1766428 .. 1766448 -  -6.9  -3.58365   TAGTATACTAGATAA            GACTTAAAG AAA CCTTAAGCC            AAAAAAACAACAAGA  68 504
JCR30_RS08930 1762725 .. 1762765 - -14.9  -3.57792   TGACGCAGTCTTAAA  CGCTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAGTT  TATCTGTTTTCATAG 100 95
JCR30_RS08920 1760780 .. 1760796 -    -3  -2.77222   ACTATGATCTTAAAG              TAACCT TGATT AGGTCA              TCGAAATATGTTTTG  43 18
JCR30_RS08915 NONE
        rpmG NONE
        secE 1757961 .. 1757980 - -13.6  -5.34555   TGATACTACAAAAAA            GGCTGGGA ATAC TCCCAGCC             TAGGCTTTTCCAAGC 100 68
JCR30_RS08895 NONE
JCR30_RS08890 1755090 .. 1755111 -  -2.2  -5.99154   CATCAAACAAAAAAA           GCCC-TGAC GTTTG GTCTTGGGC           CTCTATAAATATCAT  87 59
JCR30_RS08885 NONE
JCR30_RS08880 NONE
JCR30_RS08875 1752842 .. 1752861 -  -5.7  -5.00616   CCTTTTTCTAAAAAA            CCACCTC TAACTG GAGATGG             TCTCAAGAATTTGTG  77 52
JCR30_RS08870 NONE
JCR30_RS08865 NONE
JCR30_RS08860 1748354 .. 1748392 -   -17  -3.01329   CCAACCAACAATAAG   TAAAACAAGTCTAGGAAG TGA CTCCCTAGACTTGTTTTT   TTGAGGTTATCTGGC 100 67
        sdaB 1746557 .. 1746576 -  -7.2  -5.06735   GACAAATCATAAAAA            GCAATGAC GGCA ATCATTGC             TTTTTCTAGTATTTT  88 113
JCR30_RS08840 1744851 .. 1744863 -  -3.3  -4.07568   TGGTTTTGGTCAAAA                GACGC TAT GAGTC                GTTGCACTTATCATC  55 74
        speB NONE
JCR30_RS08830 1742906 .. 1742937 - -12.4  -4.31329   TCAAAAATCGTAAAA      GGACTGAGTCCCAT CTCT ACAGAACTCAGTCC       TTTACCTTGGCATCT 100 225
        prsA 1741571 .. 1741604 - -15.6  -2.60496   CTGGTTTTTAAATAT     TAAAGACTCTATCC TTATTT GGATAGAGTCTTTA      GCTTTATGACATTGC 100 149
JCR30_RS08815 NONE
JCR30_RS08810 1740082 .. 1740119 -  -2.8  -5.45802   TTTGGAAAACAAAAA   TCATATAACCGTTC GCTCACATAA GCACGGGTATATGA    TTTTGTACATTTGCG  76 154
JCR30_RS08805 NONE
JCR30_RS08800 NONE
JCR30_RS08795 1736615 .. 1736636 -  -5.9  -3.14136   GTATCAAGCAGCTAA           GGATGAC ATCAAAGG GTCATCC            TTTTTGACTTTTATG  57 54
JCR30_RS08790 NONE
JCR30_RS08785 NONE
JCR30_RS08780 NONE
JCR30_RS08775 1732418 .. 1732455 - -10.9   -5.9362   CAAAAGACAAAAAAA   CTTCCAATAACTTAG CTTGCGCT CTAAATTATTGGAAG    ATTATTTGACCTATT 100 44
JCR30_RS08765 1728399 .. 1728420 - -13.1  -4.60797   CTTCTATACATAAAA           GAGAGAACC GACT GGTTCTCTC            TTGATGTTCACTCAG 100 58
      scpA/B 1724575 .. 1724601 - -16.8  -5.76633   GCACATATAAAAAAA         TAGAGAGAACCA AAT TGGTTCTCTCTA         TTAAATAAGCTCTTA 100 56
         lmb NONE
JCR30_RS08750 1720842 .. 1720858 -  -6.7  -2.66787   CTAACATGGATACCA              TTTCTTT GCA AAAGAAA              ACCGCTATTATCCAA  57 132
JCR30_RS08745 1720572 .. 1720586 -   -10  -5.20216   CACACCATTAAAAAA               CCAGCT TAC AGCTGG               TTTTTTTAATTATTT 100 35
JCR30_RS08670 NONE
JCR30_RS08665 NONE
JCR30_RS08660 1704067 .. 1704092 -  -3.9  -5.87996   GAAGCAATAAAAAAA         GGCCGTTGACA CAAT CGTGAACTGCC          TGTTCGTTTCTTTAG  90 71
JCR30_RS08655 1701557 .. 1701568 -  -2.2  -2.73771   CCATAGGGCCTAAAC                CAGC TATG GCTA                 TTACCTATCACTATC  40 54
JCR30_RS08650 1700573 .. 1700610 - -17.2  -3.82218   ACTGACATGACTAAA   GAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTC    TTTGTGTTCTCCTAA 100 111
JCR30_RS08635 NONE
JCR30_RS08630 1695763 .. 1695792 -  -8.7  -5.66684   TAACTGACAAAAAAA       GCAAGCAACACGCT ATC AACA-GTTGCTTGC       TTTTTTCTAACCTCT  95 53
JCR30_RS08620 1693193 .. 1693210 -  -9.9  -5.18357   CAAGGCAGCAAAAAA             GAAAGCC CTGT GGCTTTC              CTAATATTTCAACAA 100 26
        ugpC 1691733 .. 1691765 - -19.5  -3.00525   TTTGCGCAAATGACA      TGATAAAAAGGTTGG AAC CCAACCTTTTTATCA      ATATCGCTTATACCT 100 40
JCR30_RS08610 1689979 .. 1690009 -  -8.4  -4.32649   ATCTCAAAAATCAAA      CAGCCAAAACGAG TTTCCG CTCGCTT-GGCTG       TTGGGTAAACTCAAA  83 54
JCR30_RS08605 NONE
JCR30_RS08600 1685836 .. 1685847 -  -2.2  -2.90496   TTCTTCTTTAAACGA                GACGC TAA GCG-C                AGTGCTTTACTCACG  41 32
        yajC 1685341 .. 1685362 -  -3.1  -5.83211   GATCAAAACAAAAAA           GTTTGGCATA TTT CAT-CCAAAC           TTTCCCCGCCTTAAT  89 36
JCR30_RS08590 NONE
JCR30_RS08585 NONE
        rseP 1682183 .. 1682216 - -12.6  -3.15544   TTTCATTTTGAGTAA     GACCTCAACCCT TGCAAATCTT AGGGTTGAGGTC      TTTTTCGATCTTTAA  91 75
JCR30_RS08575 1680175 .. 1680199 -  -8.6  -4.80882   AGTTCACAGCAAAAA         GAGGCCGCTCT AAAC AG-GCAGCCTC          TTCATTTCTTTTTTA  93 38
JCR30_RS08570 NONE
JCR30_RS08565 1674993 .. 1675003 -    -4  -3.02096   TGTAGTAATTATATA                 TTCT CTA AGAA                 GAGCTGTAAAGAGAT  47 45
JCR30_RS08560 1674317 .. 1674344 - -11.5  -3.27022   TTGATTTTAGACTAA        CAAAAAAAGGC TAAAGG GCCTTTTTTTG         TTAGTCTAAATAGCC  87 31
JCR30_RS08545 1673065 .. 1673075 -  -3.2  -2.85147   CTTAAGCAACAGAAC                 TAGC AAG GCCA                 AATAGCCAAGAGGCT  44 1
        rpsO 1672462 .. 1672493 - -11.8  -3.54475   TTCTTCATGATACAA      CAAAAGATACCTCA TCAC TGAGATACCTTTTG       TTATTAGATAAAATC  91 156
JCR30_RS08535 NONE
JCR30_RS08530 NONE
JCR30_RS08525 NONE
JCR30_RS08520 1667755 .. 1667772 -  -4.1  -5.77856   AACAAAGCAAAAAAA             GCAGG TTGGTATG CCTGC              TTTCGTCTCCTAATA  91 41
         pnp NONE
JCR30_RS08510 NONE
        cysE 1663586 .. 1663604 - -11.8  -4.90266   TTTATTAACGAAAAA             CCTTCACA ACC TGTGAAGG             CTTCAGAAAGTAGAC 100 462
JCR30_RS08500 NONE
JCR30_RS08495 NONE
JCR30_RS08490 1661534 .. 1661557 -    -9  -4.29738   TCAGATCTATGAAAA          TAAGAGTCTCC TAG GG-GACTCTTA          TGAGGATATCAATTG  89 23
JCR30_RS08485 1660531 .. 1660541 -    -4  -2.66634   GAGTTTATTATACCA                 TGAA TGT TTCA                 AAATAAATGCATAGA  45 46
        rlmB NONE
JCR30_RS08475 NONE
JCR30_RS08470 1658256 .. 1658279 -  -8.2   -5.2189   TTAAGCAGCAAAAAA          GGATTGAGGA TTTC TCTTCAATCC           TTATAAGGGATTAAC  90 36
JCR30_RS08465 NONE
JCR30_RS08460 1657424 .. 1657440 -  -6.5  -2.65298   TCGATTTAGGAGAAT              GGCAGAG CTG CTCTGCT              GGTGTTAACGAGAAT  57 30
        rplM NONE
        rpsI 1656315 .. 1656341 - -12.4  -5.77632   AAAACGACAAAAAAA         GCACCTTGCAAG AGA CTTGCAAAATGC         TTGTAATCGTTGATG 100 52
        lacA NONE
        lacB 1651659 .. 1651675 -  -5.1  -2.86124   TTTATTCAAATATTA              GTCGTGA TAT TCACCAC              GGACCCATTTTTCTA  51 6
JCR30_RS08410 NONE
        lacD NONE
JCR30_RS08400 NONE
JCR30_RS08395 1647597 .. 1647634 - -11.7  -4.59511   AATATCTTTCAAAAA   TAAAGTTCCCAAA-ACAA TTT TTGTGTTTGAGAACTTTA   CGACATTTAAACTGT 100 45
        lacG 1646034 .. 1646051 -  -2.7   -3.3334   AACCCGATCTTACAA             CTAATGG ATTA CCATCAA              CAGCAAATAATACTA  45 134
JCR30_RS08385 1645442 .. 1645468 - -12.4  -4.68994   ACCACTACTTAAAAA         TCCTGCCTAGAC TGA GTCTAAACAGGA         AATTTTTAGTCTGCT 100 58
        lanM NONE
JCR30_RS08375 NONE
JCR30_RS08370 1640454 .. 1640468 -  -4.4   -2.7644   ACTTAATCGTTAAAG               TTAAAA GAT TTTTAA               AATTAATTTTTGATT  47 28
JCR30_RS08365 NONE
JCR30_RS08360 1638244 .. 1638266 - -11.4  -3.17714   GGAAATCCCTAGCAA           CGACACAAGT AAA ACTTATGTCG           TTTGATTATCTGCAA  87 42
JCR30_RS08340 1630408 .. 1630419 -    -3  -2.87944   TATTAGTATACGATA                TCTT GTAT AAGA                 TTGTCAACTCTTTTT  44 155
JCR30_RS08335 1628557 .. 1628570 -  -2.3  -3.06796   TCCCAGCTGAGCTAA               GGCCC CACA AGACC                TCTCAAAACTAAATA  42 69
JCR30_RS08330 1628384 .. 1628416 -  -9.1   -3.3972   GTAGAAAATTAGGAA      TCTGACCATGTGTGC CTT GCACACAAGGGAAGA      TTGTCTATTTTCCTA  79 97
JCR30_RS08325 NONE
         rrf NONE
JCR30_RS08315 1624983 .. 1625000 -  -6.3  -5.61824   TAAAATGCAAAAAAA             GATAGGA CGCT TCCTACC              TCTTTCTACTCCGCC  89 33
JCR30_RS08310 NONE
JCR30_RS08305 1624174 .. 1624186 -  -6.3  -3.10701   GAAAGACGTATTGAA                GCTTA CTC TAAGC                TACTAACGATTTAAA  59 118
        truA NONE
JCR30_RS08295 NONE
JCR30_RS08290 NONE
JCR30_RS08285 1621506 .. 1621553 - -10.3  -5.11033   TATAATCTTAAAAAA TCCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGGG TTTAGGATTTACGGA 100 27
JCR30_RS08275 1618988 .. 1619014 -  -8.1  -5.69262   TTAGAAAAAGAAAAA         CCAGACTAGAA AGACG TTCTAATCCGG         CTTGTACGTTTTGTT  93 52
JCR30_RS08270 1618118 .. 1618142 -  -2.8  -5.54907   TCTAGAAAACAAAAA          TAGCCCCCTA TTAAC TAGAGAGCTT          TTGCCTGACCTCATA  76 123
JCR30_RS08265 1616384 .. 1616400 -  -3.7  -2.62038   CTTAAAACCACTAAT              TGCTATT TTT AATAGCT              GCTGTAACAAAAGCG  45 4
JCR30_RS08260 NONE
JCR30_RS08255 1615115 .. 1615137 -  -9.2  -5.38326   TTAACCAAACAAAAA           GAGACGAATC AAT GATTCACCTC           TTACATTATGCGGAG 100 34
JCR30_RS08250 1614020 .. 1614033 -  -5.2  -5.09225   ATTGTATCTAAAAAA               GCCC TCAAGG GGGC                TTTAGGGTATTTAGT  79 49
JCR30_RS08245 1613456 .. 1613490 -  -8.9  -3.08696   ATGGATAGAAATAAG    CTAATAAAAA-AAGCC CTAA GGCTTATTTCTATTAG     ATGCGTTCTACTTTA  71 22
JCR30_RS08240 NONE
JCR30_RS08235 1611263 .. 1611284 -  -7.3  -5.09685   CAATATAGACAAAAA           GAGTCAGAC CTTT GCCTAACTC            CTCTTTTTTTATTGT  88 47
JCR30_RS08230 1610014 .. 1610024 -  -2.6  -2.84203   AAAAGTCAATACAAC                 TTAA CAT TTAA                 TCAATACTATGTTGT  42 180
JCR30_RS08225 1609093 .. 1609104 -    -3  -2.70932   CCTCTTTTTCAATTA                CTTT ATTT AAAG                 CTTTTTAAACTTTTA  43 16
JCR30_RS08220 1607664 .. 1607681 -  -7.7  -5.65513   GATCAACTAAAAAAA             GACATGC ATCA GCATGCC              CTTTACTATATATTA  93 50
JCR30_RS08215 1606885 .. 1606901 -  -2.3  -3.00298   CCTGTCAAGTATATA              TGTTATA TTA TCTAACA              TCACTGTGTTTTTTG  42 16
JCR30_RS08210 1606446 .. 1606464 -  -3.2   -3.5365   TTAAATTTTATACAA             TTCATATC TTA AATACGAA             AATTACCAATATGCT  50 15
        glnA 1605038 .. 1605060 - -10.6  -4.19258   ATAGCTCATCCAAAA           GACCCACTCA ACT TGAGCAGGTC           CTGATAAGTCTAATA 100 35
        tsaB NONE
        rimI NONE
        tsaD 1600421 .. 1600442 - -10.2  -3.45023   TTATCATCATGACAA           CCCGGTAT GCCAAG ATACCGGG            TTGTTTTTTCAAAGG  85 84
         udp NONE
JCR30_RS08160 NONE
        deoC 1596053 .. 1596077 -  -7.2   -5.1287   TTCATAGCTAAAAAA          GCCTATTATC ACTAA GATAGTAGGC          TTTTTAACTCCTATT  88 87
JCR30_RS08145 1594110 .. 1594124 -  -7.8  -5.00616   TTTTCCTCCAAAAAA               GACCCT GAT AGGGCC               TTCGTCATTTTTTGT  88 43
JCR30_RS08140 1593457 .. 1593472 -  -4.6  -2.58663   ACCTAGCGTTATAAG              CAAGGG CTAA CCCTAG               GGATTTTTTTATTTT  47 59
JCR30_RS08135 1592572 .. 1592597 - -10.5  -5.86609   CTAAAAAAACAAAAA         CTAGCTTGAGA AGGA TCTCAGGCTAG          TTTTTTTATGAGTTA 100 45
JCR30_RS08120 1591233 .. 1591256 -  -7.5  -5.13527   AATTAACAAAGAAAA          GTGCTTAGC AATATA ACTAAGCAC           TTTTTTGTTAATTGG  88 72
JCR30_RS08105 1586554 .. 1586594 -    -4  -4.97957   CACACAATAATAAAA  GCGGTAAAGAAAAGGACC ATAAA AGACCTTATCTTTATCAC  TTTATTTCATAGTAT  70 329
JCR30_RS08100 1585523 .. 1585547 -  -4.3  -5.38951   AACTCATATAAAAAA          GACAAGTTC CTTAAGC GAGCTTGTC          TTGAGTCTAAAAGAA  79 56
JCR30_RS08090 NONE
JCR30_RS08085 1582214 .. 1582253 - -17.5   -5.3236   ATAACTTATAAAAAA  GAACAGCCATCTCATTT GATTCA AAATGAGATGGCTATTC   TTTTTTCACTTATAA 100 133
        dinB 1578467 .. 1578516 - -12.3  -4.43307   GCTGTAATAAAATAA TGGACCAAAGAAGCTGATTAGGG AAAT CCCTAATCAGCTTCTTTTTTCTC CAAAATGAGGCGGAC 100 60
JCR30_RS08050 NONE
JCR30_RS08045 1572803 .. 1572832 -  -7.3  -4.41348   TTTCTCGTAAATAAA       GAACCTAAAGGTGA AAC TCA-CTCCAGGTTC       TTATATTAGTCACAA  78 48
JCR30_RS08040 NONE
JCR30_RS08035 NONE
        trxA 1569430 .. 1569466 - -18.3  -3.56161   GAAGTTAGTAGATAA    TAAAATAAAGCTCAGCG TGA CGCTGGGCTTTATTTTA    GTTAACTCAATTCAG 100 27
JCR30_RS08015 1566893 .. 1566912 -  -6.4  -2.70932   CTTTTGGTCTAATGA            CTCACTAC TTTT GGAGTGAG             TAAGTGAGGTATACT  57 150
JCR30_RS08010 1566579 .. 1566592 -  -3.1  -2.60723   TTAGTTGGAATTAAG               CGTCA AGTT TAACG                ATCATGTGACGAAGA  43 7
JCR30_RS08005 1566055 .. 1566066 -    -3  -2.52676   TATTCGTTCAACCCA                TTCT GACT AGAA                 TGGAAGATCGTCATC  42 20
JCR30_RS08000 1565632 .. 1565648 -    -8  -5.32565   TAATCAACTAAAAAA              CAGTCC GAAAT GGACTG              TTGGTTTATTAGTCT  90 34
        uvrA 1560739 .. 1560756 -  -7.7  -4.98616   TTAAAAGATTAAAAA             GGAGCTC AAAC GAACTCC              TAATCCTATTGTTGT  88 31
JCR30_RS07980 NONE
JCR30_RS07975 NONE
         efp NONE
JCR30_RS07965 NONE
        nusB 1557437 .. 1557483 - -18.3  -4.17023   CTAATTACTCTAAAA GACAAACAAGCATACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTC TTTTAATATTCGTAC 100 86
JCR30_RS07945 1552843 .. 1552860 -  -2.7  -4.46926   CATGGCAGGACAAAA             GAGCT GCTTAGTT AGCTC              TTTTGTCCTTATTTG  60 34
JCR30_RS07940 1549539 .. 1549577 - -12.7  -4.54477   TCAAAACCTATAAAA   GACTAAAAATCTGGGAC TATTC ATCTCAGATTTTTAGTC   TTTTGGTTAATCAAT 100 114
JCR30_RS07935 NONE
        manA NONE
        secA 1544748 .. 1544784 - -11.7  -3.79071   GTTAGAAGATTTAAA    CAGTGAGAAGCTGAGAA TTA TTCTCAGCTTCTTTCTA    TATACCTAACTTTGT  90 58
JCR30_RS07920 NONE
JCR30_RS07915 1543254 .. 1543266 -  -2.7   -3.0263   ATGATTTTCTTAATA                TATCC GAG GAATA                CGGTCACTTAAAAGG  43 7
JCR30_RS07910 1541503 .. 1541529 -  -9.5  -6.17268   TCACAATAAAAAAAA         GACAATAGCCC TAATC GTGCTATTGTC         TCAAAATCATTTATT 100 128
         shr 1537194 .. 1537206 -  -3.4  -3.61774   TATAACATCTCCAAA                TGTG AAAAA CACA                CCTATCTTGCGACTA  50 133
JCR30_RS07900 NONE
        isdE NONE
JCR30_RS07890 NONE
JCR30_RS07885 NONE
JCR30_RS07880 NONE
JCR30_RS07875 NONE
JCR30_RS07870 NONE
JCR30_RS07865 NONE
JCR30_RS07860 1527199 .. 1527233 - -11.5  -2.60508   GAGGTCTCAAAAATC     CCGAGTGGCGTCAAT CTCGT ATTGACGCCACTCTT     TTACCACAGCAAAAA  83 228
        recG 1524807 .. 1524822 -  -4.6  -3.92996   TCTTACACATAATAA              CATCCG TAAA CGGTTG               TGACAAGTTCTTCTT  59 249
JCR30_RS07850 NONE
JCR30_RS07845 1522804 .. 1522831 - -12.9  -3.85817   AGCTTCCTGTAGAAA        TGTCCCACTAA AACATA TTAGTGGGACA         TTTCTAGTACTTTAA  95 328
JCR30_RS07835 1520269 .. 1520279 -  -3.2  -4.71318   AACACCAAAAAACAA                 GCAG CAT CTAC                 AACGAAATTGCTTGT  65 106
JCR30_RS07825 1518173 .. 1518186 -  -4.5  -3.39948   TTATAACAAAGCTAA               CTCGC TTTT GCAAG                GAATTATCAGAAAAT  53 179
        codY 1517307 .. 1517325 - -10.4  -5.28683   ATTAACAGCAAAAAA             CATCTCTT GAA AAGAGATG             TTTTCTTTTTCTATT 100 40
JCR30_RS07815 1516565 .. 1516575 -  -3.2  -3.02739   CCTAACCCATACATA                 CGGT AAA ACCA                 CATAGAGCAATGATT  45 89
        gatC NONE
        gatA NONE
        gatB NONE
JCR30_RS07790 1512128 .. 1512147 -  -2.2  -4.25104   CGTGCCTGAGTAAAA            TAGAAAAA CAAT TCCTTCTA             TTAAGATAGATAGAC  54 104
JCR30_RS07785 1511738 .. 1511763 - -13.3  -5.02074   TTATGTTGCAAAAAA         GGCTGCTTGGA AACT TCCATGCAGCC          TTTTTTTAATACCTT 100 31
JCR30_RS07780 NONE
JCR30_RS07775 NONE
JCR30_RS07770 1509342 .. 1509368 - -15.4  -5.63857   AAAAACTCAAAAAAA         TTAGCACTCTTT TAT AAAGAGTGCTAA         TTTCAGTCATAGTTT 100 28
        hrcA NONE
        grpE NONE
        dnaK 1505563 .. 1505584 -  -8.8  -4.67353   TTATTTAGCCAAAAA           CAGAGGTT TGGTAC AACCTCTG            AATTCGGATATTAAT  93 61
        dnaJ 1504157 .. 1504192 -  -5.5  -6.02914   TTGACATAAAAAAAA    CGTATAACTTCGGGA AAATTA TCCTGAGATTATACG     TTTGACATCTTTAAA  93 36
JCR30_RS07745 1503142 .. 1503154 -  -4.9  -3.52963   TCCTAACAATAAAAC                TTTGA CAG TCAAA                TTATATCAGAGTTAA  57 62
JCR30_RS07740 NONE
JCR30_RS07735 1501688 .. 1501700 -  -7.7  -3.85817   ATTTGTTTTTATAAA                TGTGC TAG GCACA                TGAATAACTAGATTC  73 33
JCR30_RS07730 1501254 .. 1501266 -  -4.9  -3.93867   AAATAAGGAGAATAA                TTTGA TAA TCAAA                CTATTATAGTAAGAA  62 182
        fabK NONE
        fabD NONE
        fabG NONE
        fabF NONE
JCR30_RS07705 NONE
        fabZ NONE
JCR30_RS07695 NONE
JCR30_RS07690 NONE
JCR30_RS07685 1493134 .. 1493163 - -10.8  -2.82317   TAAATAATAAACTCA       CCCCAGAGATCA TTAAAG TGATTTCTGGGG        TTTACTATTTTAAAG  81 220
JCR30_RS07650 1485149 .. 1485176 -  -2.8  -6.00086   ATATCAGAAAAAAAA        CATACTTCCAAGC ACT ACCTAGAAG-ATG        ACTCAAATAAGGTAT  91 127
        tsaE NONE
JCR30_RS07640 NONE
JCR30_RS07635 1482861 .. 1482884 -   -11  -5.19879   TTTTAAACATAAAAA          CCCTCAGAAC GTTA GGTCTGAGGG           TTGATATTAGCAGGA 100 13
JCR30_RS07620 NONE
JCR30_RS07615 NONE
JCR30_RS07610 NONE
        trmB 1478610 .. 1478632 -  -6.4  -3.78775   CTCTCCATTACTAAA           GAAGTTAATA CTG TATCAACTCC           TTTATGTTATCATAT  66 58
JCR30_RS07600 1478418 .. 1478439 -  -8.7  -4.68724   CCACTTAATACAAAA           GTGGCGAGA CATA TCCCACCAC            CTTTCTGTATTATTT  93 100
        rimP 1477759 .. 1477771 -  -3.3  -3.20307   TTAATACGATCAATA                GCCCC CTA AAGGC                TCCCTTAATTCCTTT  47 124
        nusA NONE
JCR30_RS07585 NONE
JCR30_RS07580 NONE
        infB 1472872 .. 1472900 - -12.5  -4.13014   TCCACATTTTTAAAA        CAAAAGCTAGGCT GAA AGCCCAGCTTATG        ACATTGCTACCTGTT 100 175
        rbfA 1472440 .. 1472464 -  -7.9  -5.03201   AATAACAATTAAAAA          GAGCTCTATCA TAA TGATAAGGCTC          TTTCTATCATAACAT  88 55
JCR30_RS07560 NONE
JCR30_RS07555 NONE
JCR30_RS07550 1467951 .. 1467962 -  -4.4  -4.67011   AATTCTATTGAAAAA                TACC TCTT GGTA                 GATAACCAAAAATTC  72 382
JCR30_RS07540 NONE
JCR30_RS07535 NONE
JCR30_RS07530 1464725 .. 1464749 -  -8.6  -4.63218   TTTCTTTCAAGAAAA         GCGCT-TGCGG GTAC CCACAGAGCGC          CTTGCCTTACATGAG  89 136
        lacA NONE
        lacB NONE
        lacD 1462049 .. 1462077 - -11.2  -5.37345   TGTAAGGATAAAAAA        GCAAGGATAAAA CCCAT TTTCATCCTTGC        TACAAAAGATTCAAA 100 102
JCR30_RS07505 NONE
JCR30_RS07500 1460474 .. 1460506 -   -18  -3.14132   GCTTGCCTCTATTAA      CGTAAAAAGGTTCC TTTTG GGAACCTTTTTACG      TTAATAGTTAGTCTT 100 33
JCR30_RS07490 1458658 .. 1458674 -  -4.5  -3.55966   TCATCAAAAGAGTAA              TACAAAA GTT TTTCGTA              AAATCAATCAATAAA  55 137
JCR30_RS07480 1456067 .. 1456094 -   -10  -5.08824   TTTGGATTCAAAAAA        GAAAACGTGGAT GATC ATTCACGTTTTC         TCTTTTTTTAAAGCT 100 33
        nagA 1454784 .. 1454831 -    -2  -5.22481   CATAAAGAAAGAAAA TACAAAAAGAATTGGCCTGCCA GACA TAGCTACCCCAATCCTTTTGTA TCTCTTAGGCATCAA  70 30
JCR30_RS07470 1453840 .. 1453863 -  -6.8  -5.00884   ACCGTTTTCAAAAAA          GATTTAGCGA ATTA TGGCTAAATC           TTTGTAGTTTCTTAA  83 37
JCR30_RS07465 1452950 .. 1452999 - -17.3   -5.1675   CTAGGCACCAAAAAA CCGCATTTTGATGCTCCTAAATC ATAA GACCTAGGGGCGTCAAAACGCGG TTCCACCCTAATTTA 100 233
        glyQ 1451709 .. 1451733 - -13.1  -2.78798   AGGGGGGACGCAAAG          TGAAATTATCC AGT GGATAATTTCA          GAAAACAAAAGTGTT  87 210
JCR30_RS07455 NONE
JCR30_RS07450 1449061 .. 1449087 -   -11  -3.99592   AGTCATCACGATAAA         CAAAAAGCAGTT CAG AGCTGCTTTTTG         TCTTATGATTTTGGG  93 28
JCR30_RS07445 1448420 .. 1448461 - -13.2  -4.81644   CAAAGAAAATCAAAA GACCCAACAATCACTCTG CTAATC CAGAGTCATCATTGGGTC  ATAAAGAGAACTAAG 100 135
        glpK NONE
        glpO NONE
JCR30_RS07430 1444086 .. 1444121 -  -4.8  -5.38054   TCCTATAAAGAAAAA    GCAAAGGAGCTGGCCTA TGA TA-GCCAACCCCTTTAG    TGATGGTTAGGACAT  80 32
JCR30_RS07425 NONE
JCR30_RS07420 1441191 .. 1441206 -  -6.2  -2.98282   ACCAAGTATCACACA              GTTTTG TGTG CAAAAC               TAGACTTAGCTGCTG  57 3
         fsa 1440378 .. 1440406 -  -4.5  -3.44124   ACGATGAATATAAGA        GAGCCTGTTGACA CAG TAGCCACAGACTC        TTTAGCCTTATTTTT  53 33
         tkt 1438170 .. 1438195 - -13.5  -5.44119   TTTATTTTAAAAAAA         CAGAGTAAATC ATTT GATTTACTCTG          TTTGGGATGTGTAAC 100 41
JCR30_RS07405 NONE
JCR30_RS07400 NONE
JCR30_RS07395 1435310 .. 1435325 -  -6.8  -4.95758   ATTATAGCATAAAAA              CAGCCC CAGA GGACTG               TTTTTCCGAATAATG  83 52
JCR30_RS07385 NONE
JCR30_RS07380 NONE
JCR30_RS07375 NONE
        rsmH NONE
        ftsL NONE
JCR30_RS07360 NONE
JCR30_RS07355 1428037 .. 1428052 -  -4.7    -3.317   AGAGACAAGCAAAAG              GAGTG GGACAA CACTC               ACAAAATCAGCATTT  54 113
JCR30_RS07350 NONE
JCR30_RS07345 NONE
JCR30_RS07340 1424855 .. 1424872 -  -5.5  -4.99312   AACATAACAAGAAAA             GCCCAGG AATA CCTAGAC              CTTTTTATTATAACA  77 52
JCR30_RS07335 NONE
        trxB NONE
JCR30_RS07325 1421946 .. 1421957 -    -3  -3.93695   GCTAGGATTTAGAAA                TAAC TTGA GTTA                 TCGCTAAAGTAAAAA  55 110
JCR30_RS07320 NONE
        nadE 1419536 .. 1419551 -  -7.6   -5.4505   TTCTTCAAGAAAAAA              GTTAGG ATAA CCTAAC               TTTTTTTGTTTTCTT  93 65
        pepC 1417697 .. 1417723 -  -9.4  -5.33026   TAATCTAAATAAAAA         GCGAGTCCAC GTTCTGT GAGGACTCGC         TTTTTATATGACACA 100 371
        gpsB NONE
        rnpB 1413386 .. 1413401 -    -9  -5.04868   TTAAATCAAATAAAA              GCTAGC AAGT GCTAGC               TTAACCTATTATGCA  95 44
JCR30_RS07280 NONE
JCR30_RS07275 1410682 .. 1410705 - -10.4  -5.30155   TTATTAATCAAAAAA          CTGAGACAAG TTGC CTTATCTCAG           TTTTTTTGATTTTCT 100 40
JCR30_RS07240 1404142 .. 1404152 -  -2.6  -2.55551   CACAATTCCAATTCA                 TTTT TAA AAAA                 ATTAACATCTGGGCC  41 56
JCR30_RS07235 1402421 .. 1402446 - -13.5  -3.92641   AAGGCTAGTCATAAA         GAAAAAGAGGA TAAT TCCTCTTTTTC          TACTTGGCATAATCA 100 25
         gmk NONE
JCR30_RS07225 1401350 .. 1401372 -  -8.6  -5.32699   CTAAATATGAAAAAA           TCTAAGATTT CTG AAACCTTAGA           TTTTTTCTCCTTCTT  95 21
JCR30_RS07220 NONE
JCR30_RS07215 NONE
        rsmB NONE
JCR30_RS07205 NONE
        pknB 1393890 .. 1393932 -  -7.9  -4.68994   ACGAGTAGTTAAAAA GAATAGTTAGTGGCATGCC AGTAA AACATGAGACTAACTATTC TTTGTTAAGGTGTTT  83 30
JCR30_RS07195 NONE
JCR30_RS07190 NONE
JCR30_RS07185 NONE
JCR30_RS07180 NONE
JCR30_RS07175 1389660 .. 1389688 -  -3.1  -5.69793   AGACGAAATAAAAAA        GGGTTTGGAAC TACTAAG GTTCCAGACTC        TTTTTAGTGTTCTTT  82 10
JCR30_RS07160 NONE
JCR30_RS07155 1385927 .. 1385946 -    -5  -3.14848   TGCTTTCATGAAAAT            TTGCAAGT TTTA ACGTGCAA             TTGACAAACTTTTAA  52 15
        raiA 1385054 .. 1385077 -  -4.6   -6.4275   GAAAAAGAAAAAAAA          CGCGCTTT ATATTCTG AAAACGCG           CTTTTTCATATTTTT  95 256
JCR30_RS07145 1382793 .. 1382806 -  -2.3  -3.06796   TCCCAGCTGAGCTAA               GGCCC CACA AGACC                TCTCAAAACTAAATA  42 69
JCR30_RS07140 1382620 .. 1382652 -  -9.1   -3.3972   GTAGAAAATTAGGAA      TCTGACCATGTGTGC CTT GCACACAAGGGAAGA      TTGTCTATTTTCCTA  79 97
JCR30_RS07135 NONE
         rrf NONE
JCR30_RS07125 NONE
JCR30_RS07120 NONE
JCR30_RS07115 NONE
JCR30_RS07110 NONE
JCR30_RS07105 1378819 .. 1378837 -  -4.5  -2.70932   CGTGCGCTCTAACCA             CCTGAGC TACGC GCCCAAG             CTAATAGCTTGGAAA  47 56
JCR30_RS07100 1378743 .. 1378753 -  -2.6  -3.44586   ACCAACGGACCATAA                 TAAT ATA ATTA                 TAAATAATGGGCACG  47 32
JCR30_RS07095 1378570 .. 1378599 - -13.9  -5.44198   AAGAAACAATAAAAA       GCTTAAATTTGTT ATAC AACAAATTTAAGC        TTTTTATCATTAAAA 100 90
JCR30_RS07055 NONE
JCR30_RS07050 1370884 .. 1370903 -  -6.6  -3.58905   ACTTTTTATATACAA            TATATTGA TTTT TCAATATA             GTCTTGATATAATAT  64 460
JCR30_RS07040 NONE
JCR30_RS07035 NONE
JCR30_RS07030 1370108 .. 1370119 -    -3  -2.61322   ATATCTTCTAAATAC                TGAT TATC ATCA                 CCATTTGTTCGGTAG  43 65
JCR30_RS07025 NONE
JCR30_RS07020 NONE
JCR30_RS07015 NONE
JCR30_RS07010 NONE
JCR30_RS07005 NONE
         ssb NONE
JCR30_RS06990 NONE
JCR30_RS06985 NONE
JCR30_RS06980 1365130 .. 1365141 -  -2.2  -4.09685   TCTTATCTGCTAAAA                CGTC ATCA GACA                 TCTTTATTTTGCATC  54 137
JCR30_RS06975 NONE
JCR30_RS06970 NONE
JCR30_RS06965 NONE
JCR30_RS06960 NONE
JCR30_RS06955 NONE
JCR30_RS06950 NONE
JCR30_RS06945 1361827 .. 1361843 -  -5.1  -3.25787   TATCGAACAGGAACA              GTCGG AATCGAA CCGAC              TTGCAACCGTTGTCC  54 506
JCR30_RS06935 1359657 .. 1359672 -  -4.6  -3.10775   ATTCGTAGTTAAAAG              GGCGTC TAAT GACGTC               TTTTTGTTTATTTGA  50 58
JCR30_RS06930 NONE
JCR30_RS06925 1356734 .. 1356746 -  -4.9  -3.54741   TATTAGCTTGCCAAA                GATAA GGA TTATC                GGCTAAGCTCGCTGA  57 174
JCR30_RS06915 1355113 .. 1355135 -  -9.2  -5.37345   TTTAAGTACAAAAAA           GCACCTAGCT TTT AGCTAAATGC           TCTAGATTTAATAAG 100 60
JCR30_RS06910 1354762 .. 1354777 -  -5.4  -5.21236   AAGGCATAATAAAAA              GCCGTA TTGC TACGAC               TTTGACTTCTAAAGG  82 65
JCR30_RS06900 1353209 .. 1353222 -  -2.3  -3.18383   ACCTCCATCGACTAA               GACTC GAGA GCGTC                ATCTTCCTCTCTCTT  44 58
JCR30_RS06895 NONE
JCR30_RS06890 NONE
JCR30_RS06885 1352050 .. 1352104 -  -5.1  -4.62069   GTTTGATTTTAAAAA TAGGGATACAGTGCTGAAAGCTC CTATTTATC AAGCTTTTTCCTCTGTATCCCTA TTATATCTCAAGCCC  69 1
JCR30_RS06880 1351610 .. 1351632 -    -7  -5.14563   TTTTTCACTAAAAAA           GACGATAGTT TTT ATCTATCGCC           CTTGGTAACCATTTT  88 52
JCR30_RS06875 NONE
JCR30_RS06870 1349876 .. 1349898 - -13.4  -3.21218   ACTGTCTACCACCAA           GGGTGTCGTG TTT CACGACTCCC           TTATCTTCTTCCGCA  93 180
JCR30_RS06860 1347530 .. 1347558 -    -9   -5.5112   TTGAGTAATAAAAAA        GCAGCAAATCTA TTTTT TAGACTTACTGC        ATTCTTGTAATAACC  95 19
JCR30_RS06855 NONE
JCR30_RS06850 NONE
JCR30_RS06845 NONE
JCR30_RS06840 NONE
JCR30_RS06835 NONE
JCR30_RS06830 NONE
JCR30_RS06825 NONE
JCR30_RS06820 NONE
JCR30_RS06815 1339507 .. 1339533 - -10.2  -3.41024   GTTTTCAATATAAGA         GGGCGAAAGA TTTTCTC TCCTTCGCCC         TGTGTTTTACAGCAA  85 59
JCR30_RS06810 NONE
JCR30_RS06805 1330269 .. 1330283 -  -7.1   -3.5754   AAACAGTTAAATTAA               GCGAC TTCAT GTCGC               ACCCACAAATATGCA  68 7
        ltrA 1327989 .. 1328016 -    -4  -3.61398   TTTCCCCTCTAAGAA        CCGTGCATGAGA GTTT CCCCTCACACGG         CTCAAGTTTTTATAA  52 48
JCR30_RS06790 1325519 .. 1325542 -  -4.7  -5.80364   ATTGCAAGAAAAAAA          GAATAC-CCT TATGC AGGAGTATTC          TTCCTCAAAATTGAC  95 177
JCR30_RS06775 1322977 .. 1323009 - -15.1  -3.66908   TTGTCTTAAAACTAA      TACAAGGAAAACACC ATT GATGTTTCCCTTGTA      AAATACTTATATTTT 100 49
JCR30_RS06770 NONE
JCR30_RS06760 NONE
JCR30_RS06755 NONE
JCR30_RS06750 NONE
JCR30_RS06745 NONE
JCR30_RS06740 1313670 .. 1313685 -  -3.2  -3.99236   GGCACAAAAAACTAA              CCCCTC CTAA AAAGGG               ACATCTAATTATTTG  55 225
JCR30_RS06735 NONE
      tet(M) 1311462 .. 1311477 -    -4  -2.88544   TTTTATTTCCACAGA              TGGG-AC ACA GTACCCA              CTCACAGTTTATAAT  46 137
JCR30_RS06725 1311272 .. 1311313 -  -4.5   -4.3277   TATACATAACAGAAA GAGTCGATAAGATGAGA TTTTGATT TCTCAAATTATCGGCTC  TGCGTCTTTGCGTCT  64 16
JCR30_RS06715 NONE
JCR30_RS06710 1309610 .. 1309668 - -11.3  -2.60309   TTTCAAAGAACAGAT GGCTTGTCAGCCTATCAAAACATACTG AAAGA CAATATGCTTTGATGGAATAACAAACC TCCCCAATCGGGAAG  83 88
JCR30_RS06705 NONE
JCR30_RS06700 1307637 .. 1307671 -  -4.4   -3.7795   TTAAATCTCATTAAA    TGCTCGCAAATCCTT ATTCTA AAGGGCTT-CGAGCA     TTTTTACTGTTGGAA  57 121
JCR30_RS06695 1307191 .. 1307204 -  -2.4  -2.71422   CATTTTCATAAATAC               GTGA AATCAA TCAC                TTTATCACAAACTGA  40 2
JCR30_RS06690 1306497 .. 1306522 -  -5.5  -4.20516   CTCTTACCGAAGAAA         GTAAAGGAG-GT CAA ACTCCCCTTCAC         TTTACATAAGGAAAA  66 66
JCR30_RS06685 1305734 .. 1305781 -  -2.3   -3.5147   TAGACATAACAAAAC CTCCAAACTTTCATAT-TCT TTTTTAAGG AGAAATATGATAACTTGGAG TCTTTCAGCTCTTAT  45 112
JCR30_RS06680 NONE
JCR30_RS06675 NONE
JCR30_RS06670 NONE
JCR30_RS06665 1299727 .. 1299751 -  -3.5   -3.6502   CATTTGTCATTTAAA          TCCCACCCTTG TGT CAAGTATTGGA          TACATATTTTTTTCA  50 64
JCR30_RS06660 NONE
JCR30_RS06655 1298836 .. 1298866 - -13.5  -5.00616   TTCCTCCTTAAAAAA       TATAAGGTTGAGC AGTTA GCCCAACCTTATA       AAACCTCACTTGGGA 100 21
JCR30_RS06650 NONE
JCR30_RS06645 NONE
JCR30_RS06640 NONE
JCR30_RS06635 NONE
JCR30_RS06630 NONE
JCR30_RS06625 NONE
JCR30_RS06620 NONE
JCR30_RS06615 NONE
JCR30_RS06610 NONE
JCR30_RS06605 NONE
JCR30_RS06600 NONE
JCR30_RS06595 1285850 .. 1285871 - -12.3  -5.43414   ATCATACACAAAAAA           CCGCCCAGA ATAA TCTGAGCGG            TTTTGTCTTATCTCG 100 53
JCR30_RS06580 1282493 .. 1282512 -   -10  -5.05782   AGTTATCGTAAAAAA            GGCTAAGC AGTT GCTCAGCC             TTAGCTTCACTTTTA 100 38
JCR30_RS06575 1280790 .. 1280815 - -10.6  -5.67711   GAAAGAAAACAAAAA         GCAAACCTAA TCTTTC TTAGGTTTGC          TTTTTTAGCATTAAT 100 36
JCR30_RS06570 NONE
JCR30_RS06565 1278650 .. 1278668 -  -8.8  -5.53436   AGACAATACAAAAAA             CCTTCCTG TAT CAGGAGGG             TTTTTCTTTTGGCCT  95 85
JCR30_RS06550 1276436 .. 1276455 -  -6.4  -4.92239   TTAAAAATCTAAAAA            TGCCAAGG AAGT CCCTGACA             TTTTTACTAAATAGT  83 42
JCR30_RS06545 NONE
JCR30_RS06540 NONE
        rplS 1274246 .. 1274262 -  -9.5  -5.01497   ACGACGACATAAAAA              GACTAGA GAC TCTAGTC              TTTTTATTCTATTAC 100 59
JCR30_RS06530 1273944 .. 1273960 -  -6.6  -5.49569   GAGTAATACAAAAAA              GCCTTT GATGT AAAGGC              TTTTTCAGTGACAAT  87 40
JCR30_RS06525 NONE
        gyrB 1270604 .. 1270636 -  -7.9  -3.33171   CTTAATAAGGACTAA      CATAGGTACTAAG GGGCGAT CTCAATACCTATG      CATTAACGCTGTCCC  67 148
        ezrA 1268639 .. 1268657 -  -8.9  -5.17507   AAAAGCTAATAAAAA             GTCGTGA GAATA TCACGAC             TTTCAAGTATCAAAA  95 35
         eno 1266455 .. 1266477 - -11.4  -5.27023   ACTGCAAAAAGAAAA           GACTTGGATA ACA TATCCAAGCC           TTCCTCAATAACTTT 100 88
        sagA 1265421 .. 1265460 -   -16  -3.29972   ATTTTACTAAACATA  TAGTAATTAGCAGGTACT GTCT AGTACCTGCTAATTACCT   GAGACGTTAGCATCA 100 174
        sagB NONE
JCR30_RS06490 NONE
JCR30_RS06485 NONE
JCR30_RS06480 NONE
JCR30_RS06475 NONE
JCR30_RS06470 NONE
JCR30_RS06465 NONE
JCR30_RS06460 1257397 .. 1257435 -  -9.1  -5.00412   AAATATAAGCAAAAA   GCAACCCTTTTATTG CATATAAGC CAATAAAAGGGCTAC   CTGGTAGTTAGCTAA 100 71
JCR30_RS06455 1253974 .. 1253987 -  -3.1  -3.43217   GTGAAAGGGAACTAA               GC-ACC AAG GGTTGC               AAAGCAACGGTTACA  48 215
JCR30_RS06450 1253358 .. 1253379 -  -4.3  -5.57729   AAACAACATAAAAAA           GAGAAGGGT ATTG ACCCAACTC            TTTTGAGTATGATGC  82 45
        ligA NONE
JCR30_RS06440 1250071 .. 1250093 -  -4.8  -5.20216   CATATGATCAAAAAA           GAGAGACC TCAAATG GGCCCCTC           ATATGAATAAATTGA  77 143
JCR30_RS06435 NONE
        atpB NONE
        atpF NONE
JCR30_RS06420 NONE
JCR30_RS06415 NONE
JCR30_RS06410 1245346 .. 1245365 -  -3.7  -2.60555   GAATCCCATAAGTCA            TTTTATC TCGATT GATAAAA             TTGAATGCTGACAAT  45 68
        atpD NONE
JCR30_RS06400 1243365 .. 1243375 -  -5.4  -3.86571   GCAAACAAAATAATA                 GGTT AAA AACC                 TTTCTTACTTATCCT  61 60
JCR30_RS06395 NONE
        murA NONE
JCR30_RS06385 1241348 .. 1241362 -   -10   -4.8667   CAGATGCTATAAAAA               GTAGGC TAG GCCTAC               TTTCCAGTAAATTTA 100 22
        pheS 1238944 .. 1238971 -    -4  -2.71364   TTAGTGCCCGAATCA        CTCGGTTAGAGA AAGC TCTCAAGCCGTG         ATTTGAGTCATTTCC  45 188
JCR30_RS06370 1236492 .. 1236510 -  -6.6  -5.84432   TATAACAGAAAAAAA             CGGAGCCT TAG AGGCCCAG             TTTTTTTCTTAGCGT  95 34
JCR30_RS06365 NONE
JCR30_RS06360 NONE
JCR30_RS06355 NONE
JCR30_RS06350 1233765 .. 1233789 -  -4.3  -5.65177   ACACTTAGAAAAAAA          CCAGACAAG TGCTGTG CTTGTTTGG          TTTTTTCTTCTAATA  85 62
        rexB NONE
        addA NONE
JCR30_RS06330 1224838 .. 1224848 -  -2.6  -3.29739   TCCAACGGATACTAA                 TAAA GTT TTTA                 TTAACCTTATTACTT  45 35
JCR30_RS06325 1224504 .. 1224524 -  -6.9   -5.8096   GATAAAAAATAAAAA            CAGTTCTAA TTG TGAGAACTG            TTTTTATTTTTTATC 100 42
        dnaG NONE
        rpoD 1220965 .. 1220997 - -14.3  -2.71497   TTATTTCAAAGGAAC      GACCTAAAATCGTCC ACT GGACGATTTTAGTCC      TCTATAAAGTCTCTT  93 19
JCR30_RS06305 1220387 .. 1220401 -  -2.8  -3.72302   TCTACATCAAAAAAG               GGAATA TTT CATCCC               TTTACTATCAATGAT  51 40
        rfbD 1219388 .. 1219411 - -11.8  -4.78764   TAAACCCATGAAAAA          GAGTTGGCCT TAGA AAGCCAACTC           TTTTTAGAATACTTA 100 38
JCR30_RS06295 NONE
JCR30_RS06290 NONE
JCR30_RS06285 NONE
JCR30_RS06280 NONE
JCR30_RS06275 NONE
JCR30_RS06270 NONE
JCR30_RS06265 1209836 .. 1209858 -  -4.3  -2.80946   AAGATTTTAAAAGAG           TATTCATTT TTTAT AAACGAATA           AGACCTTAAGAATTA  48 140
JCR30_RS06260 NONE
JCR30_RS06255 NONE
JCR30_RS06250 NONE
JCR30_RS06245 1205948 .. 1205986 - -10.6   -4.5265   AATTATAGCATAAAA   GGCTTTAAAATACTTA TTCAAGC TAAGTTTTTTAAAGCC   TCTAATTAAGAGTTT 100 39
        pepT NONE
JCR30_RS06235 1204150 .. 1204171 -  -5.1  -3.90112   TCTTGCCCAACTAAA           GCTCTTACC CTCG AGTAAGGGC            TTTTTTATCATGCTG  62 8
JCR30_RS06225 NONE
JCR30_RS06220 1202596 .. 1202619 - -13.2  -4.40526   TAGAGAAAAACGAAA          GCGGACTTGA TAAA TCAAGCCCGC           ACACATAATATTCCA 100 135
        infC NONE
        rpmI 1201780 .. 1201814 -  -2.3  -3.61774   TATAATACTCGTAAA    TGTCTACT-GCCTTTA AAAT TAAAGACCAGTAACCA     TTGCTTTGATACGTT  47 9
        rplT 1201296 .. 1201314 -  -6.7  -5.22006   TGAGTATAATAAAAA             GAAGACG TCCAT CGTCTCC             TTCATTTTTGTTTCT  85 91
JCR30_RS06195 NONE
JCR30_RS06190 1196869 .. 1196920 -  -4.9  -2.95166   TTATTTTAAAAACAT TAATCTAAAAACATCATTTCT TAACTATTGT AGAAATAATATTTTTAGACCA TTCACTAGTTAGAGA  51 30
        aroC 1195649 .. 1195661 -  -3.3  -4.52047   TATGATACCATAAAA                GCCAG TAT CTCGC                TATCTAAAATTGCTT  62 29
JCR30_RS06180 1195213 .. 1195240 -  -3.5  -5.34055   ATAAACACTAAAAAA        CAGATC-CTGAC GAGCT GCCAGCAATCTG        TTTTTTTCCTATCTT  74 48
        gorA 1193618 .. 1193663 -  -4.9   -5.4833   TCACCTAACAAAAAA CGATGCTAGCAGTT-TAGAAGA CTT TCCTCAAAAACTGTTAACATCA TTTTTTATTGCCTTA  83 52
JCR30_RS06160 NONE
        thiI NONE
JCR30_RS06150 NONE
        rplU NONE
JCR30_RS06140 NONE
        rpmA 1186695 .. 1186722 -  -8.4  -6.34616   GCAAAATAAAAAAAA        TCGGCTTTCCAG ACAC CTGGAAAGCCTT         ATATAATGCGATGTT 100 47
JCR30_RS06130 NONE
JCR30_RS06125 NONE
JCR30_RS06120 1183785 .. 1183804 - -10.8   -4.2793   ATTCAAATAAAAAGA            TCTCCTTG GAAA CAAGGAGA             TTCAGCAAAATATAG 100 367
        pyrR NONE
JCR30_RS06110 1181948 .. 1181970 -  -2.7   -3.9461   GTGGTCTAACAACAA           TTCTTCCTA TTTTT CAGGAAGTA           CCTGATATAAGATGA  53 9
JCR30_RS06105 NONE
        carA 1179605 .. 1179621 -  -4.4  -3.79849   TAATGATACCAAGAA              TACCAC AAGAA GCGGTA              AAGTCAGCACTTCTC  57 236
        carB 1176372 .. 1176397 - -10.7  -5.55698   TATAATCTAAAAAAA         TCATTTTTAAG TTTT CTTAAAAATGA          TTTTTTTAATTTTTA 100 38
JCR30_RS06090 NONE
JCR30_RS06085 1174232 .. 1174243 -  -2.2  -3.67597   CCTCCTAGTCAATAA                CAAC ACTA GCTG                 TAGTATCCGTTGTGA  47 3
JCR30_RS06080 1172779 .. 1172808 - -12.3  -2.57564   TCATTGCCTGACAAC       TTCCTAGCCGAAC CGAA GTTCAGCTAGAAA        TAAGAGATGTATCAC  86 206
JCR30_RS06075 1170955 .. 1170999 - -20.5  -2.63636   AAACAGTATAACTCA GTTTAAAGAAAGTGTCAAG TTTTTTT CTTGACACTTTCTTTAAAC CTTTAATAAAGACTA 100 28
        rpsP NONE
JCR30_RS06065 1170304 .. 1170328 - -15.9  -4.65895   TTTGCTATTCAAAAA          GCTTGTTGACT TTA AGTCAACAAGC          TTTTCAATCCATCTC 100 51
JCR30_RS06060 NONE
JCR30_RS06055 1165876 .. 1165924 - -30.1  -3.70511   AAGAGCACCTAATAA GCATACCCCTTTTTACAACATAG TCA CTATGCTGTAAAAAGGGGTATGC TTGTTTTTTAGCGTT 100 76
        rimM NONE
        trmD NONE
JCR30_RS06030 1161796 .. 1161807 -  -4.4  -2.53346   TGACAAACTGAATAT                TAGC TGTT GCTA                 CTGCTCTTGAAACTT  47 50
JCR30_RS06025 NONE
JCR30_RS06020 1159609 .. 1159640 -  -9.6  -5.58179   CAGCATAACAAAAAA      CTCAATATTAAAGC TTTA GCCATAATATTGAG       TATAACGATTTGATA 100 45
JCR30_RS06015 NONE
        pfkB NONE
JCR30_RS06005 1155790 .. 1155811 -  -8.1  -5.23316   TAGTATAGCAAAAAA           CTAGAACCT TGAC AGATTCTAG            TTTTAGTAAGAAAAA  90 54
JCR30_RS06000 NONE
JCR30_RS05995 1154192 .. 1154224 - -19.5  -4.74084   AAAGTAAAACTAAAA      GGATTTAGTTCTGTA TTG TACAGAACTAAATCC      TTTATTTAAAATAGA 100 91
JCR30_RS05970 NONE
JCR30_RS05965 1150075 .. 1150098 -  -4.6  -2.76263   CCTATCATCCAACTA          GCCCAATC TAAAGTGT GATTAGGC           TACTTGGGTTCTATC  47 97
JCR30_RS05960 1148835 .. 1148845 -  -2.4  -2.80472   CTCCACCAAAAAATG                 GCTC ATG GTGC                 TAATTCCTCTCTAAC  41 17
JCR30_RS05955 1146546 .. 1146590 - -17.4  -3.80625   GCGCCATAATGTAAA CTACACCCCAAACGTTAGAT AAAAA ATCTAACGTTTGGGGTGTTT TTGCATGACATTAAG 100 398
JCR30_RS05950 1145607 .. 1145618 -  -5.8     -2.89   ACCCTTATATAATCA                GGCA TCTT TGCC                 AAAAAACCTAAAGCG  56 60
JCR30_RS05940 NONE
JCR30_RS05935 NONE
JCR30_RS05930 1140695 .. 1140711 -  -9.4    -4.946   ATTAAACATTAAAAA              CCAGCC TCATG GGCTGG              TTAAGCATCGTTTAT 100 92
         mvk NONE
        mvaD NONE
JCR30_RS05915 NONE
JCR30_RS05910 1136493 .. 1136525 - -13.6  -3.29549   ACTAATATAAGGCAA      TCACCCATGTAAAC AATTG GTTTACATGGGTGT      TTAATCTTTGTTTCT  93 198
JCR30_RS05895 1132943 .. 1132965 -  -6.4  -3.74872   ATTTATTTTACCAAA           TTTATGAACA AAA TGCTCACAAA           AAATCTAAATAAAGT  66 41
JCR30_RS05890 NONE
JCR30_RS05885 NONE
        clpX NONE
JCR30_RS05875 1130199 .. 1130216 -  -4.1  -5.18726   TTTCGATAAGAAAAA             CACCCTC TACT GAGAATG              TTTTAGCATAGATAA  76 55
JCR30_RS05870 1129244 .. 1129261 -  -2.7   -5.1925   CCAGAAGTCAAAAAA             CTTCAGG CAAT CCTAAAA              GAAGGACAACTAGTG  75 119
        rpiA 1126140 .. 1126152 -  -4.8   -2.7555   TATATGCTAAGACTA                GCCT GCTTT AGGC                GCTTCTAAAACAGTA  50 10
JCR30_RS05855 NONE
        arsC NONE
JCR30_RS05845 1123468 .. 1123495 -    -2    -3.543   TTAGAAAAGCTAGAA        TCTGAGTTCAAC ATTC ATGGAACTCACA         CTCCGTGATTATTTT  47 127
        deoD NONE
JCR30_RS05835 1121014 .. 1121024 -  -3.2  -4.45544   CTCTAGCAACTAAAA                 GCCT ATT AAGC                 ATGGACGACTTGAGA  62 441
JCR30_RS05825 1119468 .. 1119491 - -12.4  -4.81685   ATTAAGCACCAAAAA          GCCTCGCTAC CAAA GAAGCGAGGC           TACAGCAAACTAAAA 100 231
        pyrF NONE
JCR30_RS05815 1117971 .. 1117989 -  -3.2  -4.38744   ATGTAGACAAAACAA             TCAAAACA TAA CATTTTGA             ATTGGGGTTAAAGAG  60 77
JCR30_RS05810 1116390 .. 1116410 -  -5.5  -2.80074   TGTTTTATAAGATTA            TTATTGAGG AAT CTTCAATAA            TCCTGCTGCCTCAAA  52 5
JCR30_RS05805 NONE
JCR30_RS05800 1114679 .. 1114707 -  -9.7  -4.33928   CATTTTAAATAGAAA        GACCCTGAAAATA TGA TATTTCCAGGGTT        AATATTCGTTTTTTA 100 48
JCR30_RS05795 1113937 .. 1113958 -  -2.2  -2.76492   CTATTTAGTTGAAAT           GGCTGGCT TATTTT AGCCAATC            TACGCCAGTCATGCC  40 11
JCR30_RS05790 1112498 .. 1112522 - -13.7  -4.33767   ATAAATTTACTAAAA          GCCTGACTTTC TCT GAAAGTCAAGC          TTTTTTGTTTTAACT 100 47
        parE NONE
JCR30_RS05775 1108844 .. 1108868 -  -3.6  -3.98658   ATTTTAGGAAAAAGA         GATGTCTT-CG ATAA CGTAAGCCATC          GGGAAAACTAGTCGG  57 33
        parC 1106197 .. 1106222 - -10.7  -4.49344   AAATTTACCATAAAA         TTAAAAAGAGT TTTC ACTCTTTTTAA          CGTGTTCTAGCTACC 100 22
JCR30_RS05765 1105052 .. 1105067 -    -9  -5.50313   CACAAAATCAAAAAA              GCTTGC AAGA GCAAGC               TCTATTTTAATCTAC  95 32
JCR30_RS05760 1104727 .. 1104752 -  -7.8  -3.61517   ATCTTTCCGTAACAA         CAAAAACTAT TCTATC ATAGTTTTTG          TAAGCTGGCAAGTGT  71 53
JCR30_RS05755 1104609 .. 1104624 -  -4.8  -4.52857   ATTTTTTACAGAAAA              CTAATT TTCT AATTAG               ATTAGTTTCCGAAAT  69 40
JCR30_RS05750 1104413 .. 1104428 -    -9  -4.64334   AATCCTCCAACAAAA              GCTAGC CAAT GCTAGC               TTTTGATAACAATAT  89 111
        rpsA 1103149 .. 1103178 - -15.3  -3.79995   CTAACCAGAAGACAA       TAAAAAGTTGAGG AAAA CCTCAACTTTTTA        GATTTATTACAATTC 100 32
JCR30_RS05740 1102967 .. 1102982 -  -2.6  -6.11392   AAAGAAACAAAAAAA              GCCT-AT CAA ATAAGGC              TTTTTTATATGATTT  91 41
JCR30_RS05730 1101124 .. 1101143 -  -7.2  -5.31275   CTGTATCACAAAAAA            CAAACCAG TTTC CTGATTTG             TTTTGAGATATTAGG  89 36
JCR30_RS05725 1100839 .. 1100856 -  -4.8  -2.91276   TGTTTCGCTATAAAG             GGCAAG ATAATA CCTGCC              TGTGTGACAATTTGA  51 61
JCR30_RS05720 NONE
JCR30_RS05715 1099105 .. 1099128 -  -3.1  -5.29445   CCTGAAGAAGAAAAA          GCTGCTTTC ATTGAA GAAAACCGC           AAAAAAGCTGCGCGT  76 176
        miaA NONE
        hflX NONE
JCR30_RS05695 NONE
JCR30_RS05690 NONE
JCR30_RS05685 NONE
        recJ 1092009 .. 1092028 -  -2.2  -3.82665   CATTATATCACGAAA            CATATTTT TCGT AAAATAAG             ACTTCTGACATTATG  50 95
JCR30_RS05675 1091366 .. 1091387 -  -3.1  -4.41047   ATCCCTCAATCAAAA           GGCTA-AAAT CGA ATCTATAGCC           TTTACTACTTTAAAT  60 68
JCR30_RS05670 NONE
         nth 1090001 .. 1090029 -  -7.5  -5.61596   ACCTCCATAAAAAAA        GAAAACCAAAGGC TAG GCTTTCGATTTTC        CATAAGTATCTTGAT  93 9
JCR30_RS05660 NONE
JCR30_RS05655 NONE
JCR30_RS05650 NONE
        rfbA NONE
JCR30_RS05640 1085777 .. 1085792 -  -2.6  -3.61654   CATATCCACCTCAAA              TGATTA ATCC CAATCA               TCTGAGTATGTTGTT  48 44
        rfbB 1084478 .. 1084517 -   -16  -4.39386   TTTAAACTATCAAAA  GAGCCTTGTCATATCAAC GATA ATTGATATGACAAGGTTC   TTTAATGTTTTATTT 100 35
JCR30_RS05630 1083776 .. 1083790 -  -4.2  -3.19157   TATTAAGGGCATTAA               GATAGG GTT CCTTTC               TTTGGGAAAATGATA  51 65
JCR30_RS05625 NONE
JCR30_RS05620 1081311 .. 1081348 - -13.6  -5.32565   TAAGCAACTAAAAAA   CAGCTCTCCTAGGAAA GTTATT TCCCCTAGGAGAACTG    TTTTTTTATTCTGAT 100 31
JCR30_RS05610 1078158 .. 1078176 -  -3.2  -2.63623   GTGTCTAAAATAGAG             CATTTTAA AAC TAAAAATG             ATAAAAATAACCGTT  43 140
JCR30_RS05605 NONE
JCR30_RS05600 1076284 .. 1076308 -  -2.2  -5.38497   ACGGAAATCAAAAAA          TCACTGAC TTATTATTC GTCAATGA          TTTAGATCGTTGATT  70 39
JCR30_RS05595 1074420 .. 1074447 -  -9.3  -4.19735   GTTGTTAAAATCAAA        GAAGG-TAGGCA GTTTT TGCCTAACCTTC        CTATTTTCACTAACG  89 35
JCR30_RS05590 1073537 .. 1073549 -  -6.3  -2.87051   GTTGTACTAGGAAAT                GGTTA AGA TAACC                TTTCTTCTTTTTGGT  58 15
JCR30_RS05585 1073159 .. 1073174 -  -5.4  -5.80364   ATTCTAACAAAAAAA              TGCCCT TTTG AGGACA               TTTTCAGCCTAGTTT  91 34
JCR30_RS05580 1071200 .. 1071226 -  -7.5  -4.95896   ACAAAGCGATAAAAA        TAAGC-TTAGCA AAAC TGCTAAAGCTTA         TTTTTATGTTTCTAT  88 29
JCR30_RS05575 NONE
JCR30_RS05570 1068772 .. 1068811 -  -3.7  -3.17219   GATAAGCGCCATCAA CATCCCCACCTTGC-TACG AAAA CATACGAAAGGTGAGG-TG  CCGCGACACGGGATA  49 134
JCR30_RS05565 1067049 .. 1067063 -  -7.2  -2.52464   TTTTGCGGTAAGTCA               GAAATC TTT GATTTC               GTTGACGCACCCACG  60 288
        lpdA 1065114 .. 1065153 - -16.7  -4.98522   AATGTCATACAAAAA  CACCCCAAACGTTAG GGTTTTATAT CTAACGTTTGGGGTG   CAGTTCATAGTTGTG 100 104
JCR30_RS05555 1064719 .. 1064732 -  -5.3   -2.5758   CCATATCACAAAACC               CTTTC GTAA GAAAG                ACTTAAGGATTTAGC  51 60
JCR30_RS05545 1060838 .. 1060849 -  -4.4  -3.78958   TCATCAAACAAAAAC                TCCT AAGT AGGA                 CACGATAGTTCGCTT  57 93
JCR30_RS05530 NONE
JCR30_RS05525 NONE
JCR30_RS05520 1055275 .. 1055302 -  -9.2  -4.92314   AGTAATTTATAAAAA        GAGACTTGGG CTAAACGC CCCAAGCCTC         TTTCCAATTGTTGGC 100 82
JCR30_RS05515 NONE
JCR30_RS05510 NONE
JCR30_RS05505 NONE
JCR30_RS05500 NONE
JCR30_RS05495 1051182 .. 1051202 - -10.5  -5.37593   CTGCAAACTAAAAAA            CAAGCGCTT TCA AAACGCTTG            TTTTATCATTTTTAG 100 66
        lepA 1048470 .. 1048497 -  -4.4  -3.64831   CTAATAATGAGATAA        CACTATAATATTA TTA TAACATTAT-GTG        CAAATGATTGTAAAG  55 122
JCR30_RS05480 1047087 .. 1047108 - -13.1  -5.08824   TCTTGATTCAAAAAA           GAGAGAACC TTGA GGTTCTCTC            TGAGTTTTACTTTCC 100 65
        msrB 1046427 .. 1046439 -  -6.3  -2.94218   ATTCCTTATTATAGA                CCTTT TAC AAAGG                CTTGTAAAATTGACC  58 110
JCR30_RS05470 1045344 .. 1045364 - -11.3  -5.80248   TAAGATACAAAAAAA            GAAATCAGT CAA ACTGATTTC            TCGTGTCTGATTACC 100 36
JCR30_RS05465 1044747 .. 1044766 -  -2.2  -3.32022   CCTCCTAGATATTAA            TCAAAAAA GTCA TCTTCTGA             ATTTGTCTCAGGGAC  44 2
JCR30_RS05460 NONE
JCR30_RS05455 NONE
JCR30_RS05450 1042531 .. 1042564 - -14.1   -5.0925   TCTTAAAAGGAAAAA     GGTAAGCAAAACAAG AAAA CTTGTCTTACTTACC      TTTATTGCTAGGAGA 100 44
JCR30_RS05445 NONE
JCR30_RS05440 NONE
JCR30_RS05435 1038896 .. 1038909 -  -3.9  -2.66634   TAGTCTACCAGATTA               TGAAA TCGA TTTCA                AAAAATGACTACGCT  45 82
JCR30_RS05430 1037370 .. 1037393 -  -4.8  -3.75169   TACTAGTTTATCAAA          TTTTTAAAAT TTTG ACTTTAAAAA           AGAAGAGTGTAACGC  59 86
        uvrC 1035457 .. 1035483 -  -3.8  -2.85446   CATAAACTCACTACA         CTTCGCAACTTT CTG AAAGTTTCAAAA         TAACGAACTGAAATG  46 98
JCR30_RS05420 NONE
        pepV 1033192 .. 1033214 - -16.4  -4.51097   CTAATCATCACAAAA           GAGCTGGAAC ACT GTTCCAGCTC           TTTTTGCTGTCATAA 100 46
JCR30_RS05400 NONE
        rplL 1029379 .. 1029401 -   -15  -5.50499   TGATATTCAAAAAAA           CCCGCTATTT TAA AAATAGCGGG           CTAATCAGCTTATTT 100 64
JCR30_RS05390 1027897 .. 1027928 -   -14  -4.99134   ACTGTAAACTAAAAA      GACAGTTATGAAAA AATT CTTTCATAACTGTC       TTTTTTTGATTGTTT 100 63
JCR30_RS05380 NONE
        folE NONE
        folP 1023860 .. 1023875 -  -4.7   -2.5547   AGTCCTCACATCAAC              TGGCT CAAAAC AGCCA               CAATGTCTTGATTAG  49 0
        folB NONE
        folK 1022881 .. 1022895 -  -7.1  -5.42862   ATACGCGTAAAAAAA               TCGGC ATAAA GCCGA               TACTATTATATCAAA  93 117
        murB NONE
JCR30_RS05350 NONE
JCR30_RS05345 NONE
JCR30_RS05340 NONE
JCR30_RS05335 1018103 .. 1018121 -  -7.4  -4.84527   TCGATACATTAAAAA             GGCTGG AGAAATA CCAGCC             TTTTTGAGGGCTTAT  88 37
JCR30_RS05320 NONE
JCR30_RS05315 1013122 .. 1013168 - -19.3  -3.12378   AATGATATTAGCTAA TCACAAAATAAGTAGAAGC-TA GAAA TATGCTTCTACTTATTTTGTGA TTTAAAGTATAACTT 100 59
        aphA 1011030 .. 1011057 -  -6.2  -5.15969   CTGTAACCCAAAAAA        CCCACTGGGCTA TTGG TTACTCAGTGGG         GTGATGAAAGAAATT  83 73
JCR30_RS05300 1009345 .. 1009362 -  -3.5  -3.12289   TAAAACATTCGAAGA             CTTAGTCT AAA AGAC-AAG             CTCGAACTTTCCGAA  45 58
JCR30_RS05295 1008631 .. 1008642 -    -3  -2.61997   GGCTAGATATAAGAT                TGAA TAAT TTCA                 GCTAGTTTAGCATAA  43 1
JCR30_RS05290 1007301 .. 1007322 -  -6.7    -5.626   TATTCGACAAAAAAA           CAAG-TTCCT TTT AGGAAACTTG           TTTTTTTTGAATAGC  89 14
        radC NONE
JCR30_RS05250 NONE
JCR30_RS05245 NONE
JCR30_RS05240 NONE
         pta  998247 ..  998267 -  -6.8  -5.76949   CACCTTCAAAAAAAA            CGAGATGG TCTGG CCAACTCG            TTTTTAATAATGTCA  89 107
JCR30_RS05230  997212 ..  997238 -  -7.3  -4.33819   AGTATTTAGAAGAAA        CTGGACAAGCCA TTGT TGGCTGGTCC-G         ATGTCACATCAGGCC  78 254
JCR30_RS05220 NONE
JCR30_RS05215  993889 ..  993909 -  -6.1  -5.27399   TAAGAGACGAAAAAA            TGCCAGTCC TAC GGACCAACA            TTTCTGTTTATTTCT  84 33
        guaC  992661 ..  992676 -  -6.2  -3.70149   TCCATATCATTTAAA              TGGAAT CACC ATTCCA               AATAGAATTTTTGAC  62 5
JCR30_RS05205 NONE
JCR30_RS05200  990463 ..  990477 -  -7.1  -5.39721   TGATCACAGAAAAAA               CGGCT CAATT AGCCG               TTTTTTAATTATTCA  93 34
JCR30_RS05185 NONE
        prfA NONE
        prmC NONE
JCR30_RS05170 NONE
JCR30_RS05165  985207 ..  985217 -  -3.2   -3.0464   AATCCATTCCTAATA                 CGGT GTC ACCA                 GCCTCAATCAAGGCC  45 350
JCR30_RS05155 NONE
JCR30_RS05150  982708 ..  982720 -  -2.7  -3.40522   ATCGTTTCATGATAA                CTTTC TAA AAAAG                GCTCATCAGTTCAAT  47 17
JCR30_RS05145 NONE
JCR30_RS05140  979229 ..  979252 -    -9  -5.28683   AGGAAGATTAAAAAA          GTTCATCTTT GTTA AAAGACGAAC           TTTATTCTATCTTTT  95 27
JCR30_RS05135  977603 ..  977627 -  -7.7  -5.54079   TTAAAAAGCAAAAAA          GCCAGTGCTGC TGA ACTGCTCTGGC          TTTTTCCTATCAGAT  93 42
        gyrA NONE
JCR30_RS05120  973053 ..  973066 -  -3.9   -3.1241   ATTATATTTAAGATA               TATCT AGGT AGATA                CTTGGTTATAAGAAT  47 15
JCR30_RS05115  972262 ..  972281 -  -6.6  -4.48175   AAAATTGAAGTAAAA            TTATCTAT CGCA ATAGATAA             AAAAACATTAATACG  76 304
JCR30_RS05110  971527 ..  971540 -  -8.1  -5.30189   CAGAAGATTAAAAAA               GTGCC TAAT GGCAC                TTTTTGTCTTATCTT  90 57
        ylqF NONE
JCR30_RS05085  967538 ..  967554 -  -5.9  -6.28401   TAAAAAAGAAAAAAA              TTCTGCT AAA AACAGAA              CTTTTTAAGGATTAG  95 30
        dprA NONE
        topA  964388 ..  964417 - -12.3   -5.1361   AGAAAGGGGAAAAAA       GCAAAAGAGGCTA TGTG TAGCCTCTTTTGT        AATCCTCATTTAATT 100 31
       trmFO  962898 ..  962927 -  -3.6  -5.30155   TCAGCAAGTAAAAAA       GTCCTCTTCAGC AACTCA ACTGAAAAGGAA        CTCTTTTTTTAGTGT  76 40
JCR30_RS05065 NONE
JCR30_RS05060 NONE
JCR30_RS05055 NONE
JCR30_RS05050  959468 ..  959490 -  -6.3  -5.14563   CTTTCTACTAAAAAA           GGAGCTAGA TTGCT TCCAACTCC           TGATAATGATTTATT  84 70
JCR30_RS05030 NONE
JCR30_RS05025 NONE
JCR30_RS05020  954008 ..  954029 -  -2.2  -4.46073   GCCTAACACAATAAA           GACACCTG CCATAC CAAGCGCC            ATTAGCTCAAAGGAA  59 87
        citD NONE
        citE NONE
        citF NONE
        citX NONE
JCR30_RS04995  949105 ..  949131 - -12.5  -5.49569   TACTAAGATAAAAAA         CCTATCTGATT ATCAA AATCAGATAGG         TTTTTGGTATTGTTC 100 99
JCR30_RS04975  944413 ..  944442 - -10.9   -4.9251   AAGAAAAAACGAAAA       TAAAAGAGACGAA AATT TTCGTCTCTTTTT        GATGTGAAATTCATT 100 115
        guaA  938411 ..  938462 - -17.8  -3.85786   ACGAAAACAGTTAAA GAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTC TGTTATTCCCATTCA 100 28
JCR30_RS04925  931951 ..  931978 - -14.4  -3.62591   GGGATAAGGTTTAAA        TACCTAACAGAT AAAA ATCTGTTAGGTA         TTTTTTTGCTACTAT 100 425
        coaB NONE
        coaC NONE
JCR30_RS04860  919518 ..  919550 -  -8.7  -4.42851   GTAAGAAAGTTAAAA      TAACCAAGTTTTT AAAAGAG AAAAACTCGGTTA      TTGTGAAAGCTAATT  89 39
JCR30_RS04855  917604 ..  917626 -  -9.2  -4.88711   AGAATAGACTAAAAA           GAACTAAGTC AGC GGCTTAGTTC           TTTTTGCTTGTCTTT 100 69
JCR30_RS04820  909753 ..  909768 -  -2.6  -3.26596   TCCAAATTAATCTAA              CTACAT TATT ATATAG               AAAATATATGCGTTT  45 53
JCR30_RS04815  909465 ..  909476 -  -5.8    -5.626   TATCGTATAAAAAAA                CTCC AGCT GGAG                 TTTTCATTGGATATT  88 43
JCR30_RS04710  887140 ..  887160 -  -9.8  -3.52111   CGAAAAGGATTATAA            GTTTGAGG GCCCA CCTCAAAC            TTTTTTTGTTGCTGT  81 147
JCR30_RS04665  879354 ..  879374 -  -3.2   -5.4505   GGGCTTAAGAAAAAA            GCCTAGCT TCTTG AACTTGGC            AGAAGAAGACTAGGT  77 67
JCR30_RS04660  877936 ..  877969 -  -6.1  -5.42259   GTATTCTTAAAAAAA     TCCCTATGATCTGTT TAAA AACAAATTGTAGGGA      TTTTTTTAACTATTT  86 117
JCR30_RS04605 NONE
JCR30_RS04600 NONE
JCR30_RS04595  863147 ..  863186 - -13.3  -5.52909   GAACACTGAAAAAAA  CTTTCTTTTAAACTATA GTGTGT CATAGTTTAAAAGAAAG   TCTTAACGCTTACTG 100 35
        ssrA  861967 ..  861982 -  -4.7  -5.98675   GACAAAAAGAAAAAA              CCTTG ATGTAA CAAGG               TTTTAGTAAGTTATG  93 59
JCR30_RS04580  861037 ..  861066 - -13.1  -5.07941   AAAATGATATAAAAA       GATTGATTTCGAT GTAC ACCGAAATCAATC        TTTTTAGCAAAATAT 100 53
JCR30_RS04560  854214 ..  854269 -   -13  -3.78775   CTTGTTAGGATGAAA TAGCTAAGTGTTACGTAAACTTTTAA AGAG TTAAAAATTTAAGTAGCACTAAGCTA CTAGTAAAACAAAAA  95 177
JCR30_RS04555 NONE
JCR30_RS04550  851907 ..  851933 -  -9.5   -4.7497   CTTATTTATCAAAAA         CCTCCTAAAGG GCTTG CCCTTAGAAGG         TTTGGTATGTTGTAA 100 42
JCR30_RS04545  850528 ..  850575 - -15.8  -4.70659   TTTGATATTCAAAAA GCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGC TTTTGTTTTATTTAC 100 233
JCR30_RS04505 NONE
JCR30_RS04500  839387 ..  839410 -  -9.6  -5.31059   ACAGTAACCAAAAAA          GGCAAGGAGA TAGG TTTCCTTGCC           TTATTATTTTTTGGA 100 63
JCR30_RS04455  830936 ..  830958 -  -9.2  -4.92239   TGAAAAATTGAAAAA           GGATGAGG CTTAGGC CCTCATCC           TTTTTTGACCTTTTT 100 20
JCR30_RS04435  827547 ..  827561 -  -2.9  -3.25088   CGCCAAATCCATGAA               GAAAA TTTTG TTTTC               AGAAATCACGATTCA  45 106
JCR30_RS04425  824936 ..  824953 -  -4.9  -3.23276   AGTTAGACAATAAAT             CTAACTT AAGG AAGCTAG              CAGCATGAGAATCCA  54 8
JCR30_RS04420  824557 ..  824573 -  -3.7  -3.85817   ATTTTCCTTCAGAAA              CTGAAAT TTT ATTTCCG              GTTTGGCTTCAAGAA  55 17
JCR30_RS04415  824164 ..  824180 -  -2.9  -2.56596   TTGTGTAGGAATGTA              GGTTAAG TCT CCTAGCC              ATAATTTATTCTTAC  41 81
JCR30_RS04410  823704 ..  823714 -  -5.4  -4.30844   ATGGGACCATTAAAA                 CTAG ACC CTAG                 CCTTGCAGAAGGGGA  67 274
JCR30_RS04400  822535 ..  822559 -  -7.2  -4.96646   TGAGATAAGCAAAAA          GGTAAGCACT TAGGG ATTGCTTACC          TTTTTGGTTCTTTTC  88 48
JCR30_RS04390  819358 ..  819376 - -14.6  -4.05389   GAGAGATACCATAAA             CCACCCGT TAG ACGGGTGG             TTACGGTTTATTTAC 100 33
JCR30_RS04315  801043 ..  801064 - -10.2  -3.77906   AACTGAAATACATAA           GGGTAAGG TTTTGC CCTTACCC            ACGTTTTATCTCGTT  87 262
JCR30_RS04295  797892 ..  797916 -  -2.2  -3.08464   GTATTATTTAGTCAA          GGCTCTTTTA TAGTT TAAAAAAGCA          CATCATCGTCAAGGG  42 15
JCR30_RS04280  795630 ..  795659 - -15.3  -3.89614   AATTGATATACTAAA       CAATCCAATTACT TTGA AGTAATTGGATTG        TTGTTTTTAGTAGCC 100 67
JCR30_RS04255 NONE
        nrdE  787540 ..  787567 -  -8.5  -4.07868   GGATATCGAGATAAA        CCAGTAGAACC GACCAA AGTTCTACCGG         TAATAATAAGTTTAA  82 277
        nrdF NONE
JCR30_RS04240  784921 ..  784947 - -14.5  -3.23395   ATTGAGCATGACGAA         GTGCGCTCCCA TGTCC TGGGAACGCAC         TTTCTCCATATTTTT  95 317
        queA  769431 ..  769447 -  -3.7  -4.56597   TCTTTCTGCCAAAAA              CTGAC GCAAAAA GTCAG              AAACATCAAGAAGAA  65 71
JCR30_RS04125 NONE
JCR30_RS04120  760133 ..  760157 -  -7.3  -5.71983   TGAAGCATAAAAAAA          TCATTGAGA TGATAAG TCTCAATGA          TTTTTCTTTTCTTTT  93 19
JCR30_RS04060  745231 ..  745264 - -12.7  -4.62069   TTCCCATTTTAAAAA     GCTTGGAAAGTGTACA AAG TGCACA-TTTCCAAGC     TTTTTTGACTATTAA 100 43
JCR30_RS03785 NONE
JCR30_RS03780  708003 ..  708044 -    -7  -2.78032   TTTCTGTTAAAATAG GTATAGTAAAGAGACCTACT GCGA AGCAGGT-T-TTTACTATAC TAGATTCGCCTCACG  62 76
JCR30_RS03775  706754 ..  706790 -  -3.7  -4.61199   ATTGCATAGATAAAA   GCCCATTGTATCAAGC GTTACA GCCTG-TGCAGTGGGC    TTTTTTGTGTTCAGG  65 64
JCR30_RS03705  693092 ..  693117 -  -6.9  -3.49102   ACACGTTCCAGAGAA         GTATCT-CCACG AAC CGTGGAAGATGC         CAAAATACCTTCAAG  64 169
JCR30_RS03680  687302 ..  687325 -  -8.2  -4.11744   ATTGATAGAAAAAGA          GAGAGTCTCC TTAT AGAAACTCTC           TTAGCTAACGTTAAT  81 36
JCR30_RS03675 NONE
JCR30_RS03670  686351 ..  686374 -  -8.2   -5.4505   TTCGCTAATAAAAAA          CTTAGCTCTT TTAG AAGGGCTAAG           TTTTGTCTGAATAGC  93 51
JCR30_RS03580  667535 ..  667547 -  -4.1  -4.57073   TATCTGGCCTAAAAA                TGCTC TAG AAGCA                CAATCCAAAATAATC  67 6
JCR30_RS03505  651945 ..  651988 -  -7.6   -5.4756   AAGGTTAACAAAAAA GCGAGTAAACGAATGTCCT GTCATTT AGGTT-TTCGTTTACTCGC TTTTTGATGAGATTT  93 105
JCR30_RS03455  641209 ..  641220 -  -2.2  -5.00884   ATGGTCGGCAAAAAA                CTCG GAAA CGAA                 CGCTTCGTAGCCAAC  69 365
JCR30_RS03425  636582 ..  636609 -  -9.3  -5.64274   CTAGCTATAAAAAAA        TACTGCCCTAA ATCTTA TTAGGACAGTA         TTTTTTATAGATGCC 100 33
JCR30_RS03420 NONE
JCR30_RS03415  634108 ..  634130 -  -9.2  -4.68645   TATGGAAAAGCAAAA           GAGAAGGTGA CGC TCATCTTCTC           TTTTTACGTATTCAA 100 394
JCR30_RS03355  619214 ..  619224 -  -5.4   -3.2827   GTAGCTAATCAGCAA                 TCCT TTT AGGA                 TGTCTTTGTAGATGT  55 91
JCR30_RS03335 NONE
JCR30_RS03330  610225 ..  610250 - -14.1  -3.28783   TCAAAATCAACTTAA         GAGTCTGAGAC AATA GTCCCAGACTC          TTTTTGAATATGTTA  95 63
        sda3  605319 ..  605359 - -10.8  -4.06491   TTAACTTTATACAAA  TTACCCCAAATATTAAAT AAATA ATCTAACATTTGGGATAA  TGTTCACAATCTAGA  93 66
JCR30_RS03305  604653 ..  604674 -  -7.2  -3.54768   TAAATAAAAAGCCAA           CCGCTCTC TTGATT GAGGGCGG            TTTTTTGTGTTATAA  68 45
JCR30_RS03165 NONE
JCR30_RS03160  580461 ..  580478 -  -7.7   -5.1101   TTATTATGTAAAAAA             GAACCAC AACA GTGGCTC              TTATGCTTGTAATTT  88 26
JCR30_RS03040  569103 ..  569127 - -11.5  -4.72863   GTAAAGAAACTAAAA          GAAGCCCATCC AAA GGATAGACTTC          AATTCAATGTAAACA 100 57
JCR30_RS03025  566984 ..  567001 - -11.3  -3.41745   TGGTGACAATATCAA             GAGGGCT AAGA AGCCCTC              TCCCCTAACGGGGTA  89 351
JCR30_RS03015 NONE
JCR30_RS03010  565366 ..  565376 -  -3.2  -4.57569   TTACCGCCTGAAAAA                 CCTG CAT CAGA                 GTAGTTTTTGTAAAT  62 280
JCR30_RS02965  553467 ..  553511 - -14.6  -4.90381   TTCAAGAGAAGAAAA GCACCCCAAAAGTTAGAT GTTTGATGT ATCTAACTTTTGGGGTGT CATTCAAAATTTAGT 100 111
JCR30_RS02915 NONE
JCR30_RS02910 NONE
JCR30_RS02905  542065 ..  542080 -  -4.8  -4.15222   AGTGCTTGTAACAAA              TTGATA TCCA TATCAA               TCTCCTTTATTCATT  64 39
JCR30_RS02900 NONE
JCR30_RS02895  540424 ..  540475 -  -6.7  -5.07652   CTTTCCAAAAGAAAA GAGACCTCATCATGTGCTTAGGAA CTATT TCCCTATGCTCATAAC-AGGCCTC TGTGAACCATTAAGC  84 35
JCR30_RS02890 NONE
JCR30_RS02885  537361 ..  537384 -  -9.7  -4.19472   TAATAGACGCTAAAA          GGTTTGAGA TAATTG TCTCAAACC           TTTTTTTATAATCGT  93 73
JCR30_RS02870  532370 ..  532397 - -14.4  -4.90266   TGTAGTAACTAAAAA        GATTGAAGAAAG TACT CTTTCTTCAATC         TTAGAATGGAGGCAA 100 296
        yidA NONE
JCR30_RS02860 NONE
JCR30_RS02855  528857 ..  528902 -   -18  -3.34013   GATTTCCTTAACTAA GTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGGC TTAACTCTTAATATG 100 78
        pepF NONE
JCR30_RS02825  519597 ..  519638 - -22.1   -2.8742   TTTAAATAGTAACTA TAATACAAAATAGACTTGG CACG CCAAGTCTATTTTGTATTA  ACCAAGAAGTGCTTT 100 23
JCR30_RS02810  517285 ..  517306 -  -8.1  -5.36441   TGGTGACATAAAAAA           CTCCTTTTG TGCA CAAAAAGAG            TATCGCTTTCCAATC  90 266
        thiT  516659 ..  516682 -  -7.6  -5.88197   CTAAACATAAAAAAA          TGGTATAACA ACAT TATTATACCA           TTTTTTTAATGTAAG 100 58
JCR30_RS02800  516086 ..  516098 -  -2.7  -4.57787   ATAATACTAAACAAA                GACTA GCT TAATC                AAGGCGAAAACTTAA  60 72
JCR30_RS02795  514842 ..  514870 -  -3.2  -3.35679   TGTGGCTATTGATAA       CTTTGAACAGCTC TTTG GTGCCGTT-AAAG        TACTCTTTGATTTAC  48 337
        lysS  512406 ..  512431 - -14.9  -4.16842   GCTACTGTTAATAAA         CCAGTCTTCAT GGTA ATGAAGACTGG          TTAGAGATAATAAAA 100 98
JCR30_RS02780  511858 ..  511882 -  -6.6  -5.64274   TGAGTCATAAAAAAA          GTGAAAAAAA GATGA TTTTTTCCAC          TTTAATTTCGAATAG  89 371
JCR30_RS02760  508620 ..  508634 -    -5  -5.00616   CTTTCGTGCAAAAAA               CAAAAG AAA CCTTTG               CCGAAGTTGAAGCGA  77 303
JCR30_RS02720  502433 ..  502459 - -10.3  -2.91099   TAGATGATAAAAGAG        GAGGCTGAAACA CGAA TGTT-CAGCCTC         GACTGATACGTTTTG  79 116
JCR30_RS02715 NONE
JCR30_RS02710  500644 ..  500670 -  -6.7  -4.89729   GATAAAACTCAAAAA         GCATTTGTTTT GATAA AAAACAAGTGC         TTTTTTATTAGTCTT  83 40
JCR30_RS02690  494698 ..  494725 -   -15  -4.90906   TTATAACAGCAAAAA        CCAGTCTCGTTC AATA AAACGAGACTGG         TTTTTAGTATGTCAT 100 42
JCR30_RS02670  489841 ..  489873 -  -8.7  -5.14563   GTCTCTACTAAAAAA     TACTCCGTCTTCTA TGAAAC TAGAA-ACGGAGTA      TTTCTGTTTGTCTAT  95 234
JCR30_RS02600 NONE
JCR30_RS02595  481360 ..  481405 -  -6.4  -3.07005   AATCAATGGCTAATA GTGAGGA-GGATTT-GCCGATA GAGT TATCAGCTAAATCCATCCCCAT AATCACGTTTAACCC  59 103
JCR30_RS02585 NONE
JCR30_RS02580  479582 ..  479623 -  -9.6  -3.03151   TTTTTCAAAGTAAAG GCACTAAGTTGATCTGAC TTACAC ATCTTATCAACTTAGTGC  TTTTTTTATTTCTAG  77 37
        rgg3  468509 ..  468534 -   -12  -4.60949   TAGAGTACAAAGAAA         GCCTTGGAAA TAGCAG TTTCCAAGGC          TTTTTAGCTGTCGAT 100 130
        dhaS NONE
        dhaQ  452158 ..  452182 -  -4.2  -3.49135   TAGATAATGAAGGAA          GGCAGCTGTT GTAAA AATGGCTGCC          TTTTTTGTGATGGTT  53 40
JCR30_RS02410 NONE
JCR30_RS02405 NONE
JCR30_RS02400  441126 ..  441151 - -14.9  -5.42198   GGTTAAAAAATAAAA         CAACAGAAGCT TTAA AGCTTCTGTTG          TTAATAGTATTAGTT 100 35
JCR30_RS02395 NONE
JCR30_RS02390 NONE
JCR30_RS02385 NONE
         pcp  437521 ..  437541 -    -4   -5.9873   TTAGCACAAAAAAAA            CAGAGTTA GTTCA TATCTCTG            TTTTTTTTAAATAGG  93 57
        shp2 NONE
JCR30_RS02320  426946 ..  426957 -  -2.2  -4.18197   AGCTGGTAGTTAAAA                TAGC ATTA GCCA                 AGTGGTTGTACTGGC  54 338
        stcA  426565 ..  426589 - -15.1  -5.06451   GATTAGCTTAAAAAA          GAACACTACCG AAA CGGTAGTGTCC          ACTGATTTTAGGAGA 100 42
JCR30_RS02185  406924 ..  406966 -   -18  -3.02698   GTATTGCAGACAAAC TAAAAGAACCTGACGTCTCA TGA TGAGATGTCAGGTTCTTTTT TTGTGATGTCAGGCC 100 55
JCR30_RS02175  403452 ..  403464 -  -4.1  -3.79623   AAAAACCTTATCAAA                CCAAG GTA CTTAG                CCTATTATCTGATAA  57 59
JCR30_RS02155  399922 ..  399959 - -24.5  -5.40474   AGCCCCTCAAAAAAA   GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC    TTTTTGAGGAGACGC 100 47
JCR30_RS02105  391721 ..  391761 -   -12  -2.75064   CTTTGCACGCAATCA  GCAGCACAAAAAGCACCC CTGAC AGGTGCTTTTTGTGCTTT  AGCCAACCTCATAGC  84 52
JCR30_RS02090  389530 ..  389542 -  -4.8  -5.81032   GAACCTCAAAAAAAA                GGAC ATGGA GTCC                TTTTTTTGGTGATCG  91 53
         xth  373996 ..  374024 - -10.3  -5.07107   CAAAGTCTCAAAAAA        GGACAAGGCAACA TTA TAACGCCTTGTCC        TTTTTTGGGATCTGT 100 50
JCR30_RS02040  372653 ..  372679 -  -6.7  -5.50925   AACTAAGAGAAAAAA         GACCATCAA TTGGATTTG TTGATGGTC         TTTTAGGTGTTTAAA  87 36
JCR30_RS01985  362959 ..  362972 -  -6.7  -5.40625   ATAGCATAGAAAAAA               GGCTT AACA AAGCC                TTTTTTGATGTGATT  87 125
JCR30_RS01980  362052 ..  362065 -  -6.7  -3.12847   AATAAAGTTATTGAA               GCTGA TAAG TCAGC                ACTATAGGACAGTTG  59 4
JCR30_RS01975 NONE
JCR30_RS01970 NONE
JCR30_RS01965  359008 ..  359032 -  -7.9  -5.39721   GCACCATAGAAAAAA          GCTAGGAACAA GGA CTGTTCTTAGC          TTTTTGAGTGCTTTT  93 39
JCR30_RS01850  341832 ..  341848 -  -2.3  -3.85817   AGTTTTTTTCAGAAA              TTCACAA TAG TTCTGAA              GGCCGATTTTTAATT  50 35
        yidC  340406 ..  340429 -  -3.1  -5.17488   AATACCAAAAGAAAA          GACCAGCAC CTTAAT GTACTGACC           CCAAAAAGTTGGACA  71 449
        rsmG  322178 ..  322195 -  -5.6  -5.23016   AAATAAGTTAAAAAA             GCTAAG TTTCAT CTTAGC              CTTTGGTACTATTTT  82 39
JCR30_RS01760 NONE
JCR30_RS01755  320032 ..  320055 - -11.1  -5.64304   TAACATAATAAAAAA          CATCCTTGG AAAACG CCAAGGATG           TTTTTTTATTATTTA 100 34
        brnQ  317131 ..  317168 - -10.2  -4.57482   TTAGTCATAAATAAA  CGAAACAACACCCTAAGT TTTT ACTTAGGGTGTTGTT--G   TTTAGATGATGTCAT 100 27
JCR30_RS01640  298769 ..  298785 -  -3.7  -3.85817   ATTTTCCTTCAGAAA              CTGAAAT TTT ATTTCCG              GTTTGGCTTCAAGAA  55 17
JCR30_RS01635  298327 ..  298340 -  -3.1  -3.96148   TCTTTCTACTATAAA               CGTCT ATCA AGACA                GACACATAAAGTATT  55 133
JCR30_RS01625 NONE
JCR30_RS01620  297374 ..  297391 -  -3.5  -4.06055   ATGGTTGAAATCAAA             CCAAATCA CTT TG-TTTGG             GCAAACCAAGCAGAA  56 105
JCR30_RS01590  289363 ..  289386 -  -6.8  -5.24003   AATAAAAATGAAAAA          GACTG-CAGAA GTA CTCTGTCAGTC          AATGTCATACAAAAA  85 54
JCR30_RS01585  288023 ..  288060 - -17.4  -3.42884   ACACGTAAGATAACA   TATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATA    ATTCATTATTGGCGT 100 31
JCR30_RS01535 NONE
JCR30_RS01530  275083 ..  275111 -  -2.5  -5.15969   TTTGAATTGAAAAAA        GACCCAACT GGCATAGAAAT AGTTGGATC        CTTTATCTTATTTTA  69 33
JCR30_RS01525  274791 ..  274817 -  -3.8  -4.98522   AACTGTATACAAAAA         GGCTAAGA TGGAAGGGGTG TCTTAGCC         TTTTTTTGTCTGACT  70 69
JCR30_RS01450  257614 ..  257660 -  -7.4  -4.58663   ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT  82 8
JCR30_RS01330 NONE
        galU  231554 ..  231609 - -18.8  -2.98761   AGTAGGATGAAACGA CTCAAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTT-GTT TTCTCTAGTGCTTTG 100 13
JCR30_RS01315  228397 ..  228444 - -18.1  -4.43309   CAAGGTTAAGTAAAA GCGATAATAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTATTAT-GC CAAATTTCAGATAAG 100 212
JCR30_RS01300  224681 ..  224695 -  -2.9  -5.03405   AACAGGACATAAAAA               GTTTT AAATG AAAAC               AAACATTTTGACAAT  69 14
JCR30_RS01290  222569 ..  222595 -  -3.6  -4.72127   ATAGAATATACAAAA         GGGCGTTTCCAA GTA CTAGAAGCGCTC         TTTTTCAGACCCAAT  67 486
JCR30_RS01260  217625 ..  217652 -  -8.6  -3.61268   GAGTTAACCCTTAAA        TAAAGGCATTAT AAAT ATAGTGCCTTTA         CAAATCAAAAACCCC  77 86
JCR30_RS01180  197237 ..  197265 -  -2.4   -3.2672   ATCTGAATAAGAAAT        GTGGCGACCT AGGATTAGA AAACCGCCAC        GAGATGGTTTTTTAT  44 77
JCR30_RS01175  196883 ..  196910 -   -20  -4.88407   TTAGCCAATCAAAAA        GCCTAAGGCTGC ATAA GCAGCCTTAGGC         TTTTCATAACCGTAG 100 80
JCR30_RS01170  196270 ..  196300 - -12.8  -5.51046   CAAATACAGAAAAAA       GCTTGTCTATGA GATACCT TCATAGACAAGC       TTTGTTATAACTGTT 100 47
JCR30_RS01135 NONE
JCR30_RS01130  186191 ..  186228 -  -6.5   -5.2189   TTAAGTAGTAAAAAA  GCAAGCCATCAA--AGG GATTAA CCTAACTGATGGCTTGC   TTTTTAAGTAGCGTG  85 57
JCR30_RS01070  174148 ..  174161 -  -2.3  -4.45577   AGAAATTGCAGAAAA               TGGAG ATAT CGCCA                ATTACCTGATTCCAG  59 440
JCR30_RS01050  170866 ..  170890 -  -2.9  -3.90574   AATAACTACATGAAA         CGCCTG--GGA TTGTT TCCTTCAGGCG         TTTTTTTTAAGGTCT  53 52
JCR30_RS01040  168353 ..  168382 - -10.2  -5.24416   CAAGTATAATAAAAA       GAGTCTGAG-CAA TCATG TTGTCTCAGACTC       TGACTGTAATTATGC 100 67
JCR30_RS01030  163587 ..  163601 -  -2.1  -3.66356   ACTTTTAAGCCCAAA               CGGTT AGTAA AACCA               ATACCGCCTAGACAA  49 326
JCR30_RS01000 NONE
        hslO NONE
        dusB NONE
JCR30_RS00985  154378 ..  154390 -  -6.3  -3.31461   GATTTAGTCTTAGAA                GAAGA TAC TCTTC                CCTTTTGATAGGGGA  61 293
        pepA NONE
JCR30_RS00955 NONE
JCR30_RS00880  131464 ..  131488 - -10.1  -5.29445   TTTTAATAAGAAAAA          TCCTCACATGT TTA ATATGTGAGGA          TTTATTTATAAATGC 100 464
JCR30_RS00540   85428 ..   85448 -  -6.2  -5.84381   GCATTAATAAAAAAA            TGTGGTCT AATTA AAACCACA            TTTTTTTATTAAAAG  93 55
JCR30_RS00490   72588 ..   72610 -  -9.1  -4.07772   GAAATAAAAAACCAA           CCGCTCAGA TTATT TCTGGGCGG           TTTTTTTGTGTCTAA  85 56
JCR30_RS00270 NONE
JCR30_RS00265 NONE
JCR30_RS00260 NONE
JCR30_RS00255   34245 ..   34260 -  -3.2  -2.94365   TCACACCTTAGAAAT              CCCTTG AAAT CAATGG               GTTTCTAAATCCAAA  44 75
