SPYM_RS00005 SM00382 ATPases associated with a variety of cellular activities SPYM_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SPYM_RS00010 SM00480 DNA polymerase III beta subunit SPYM_RS00030 SM00487 DEAD-like helicases superfamily SPYM_RS00030 SM00490 helicase superfamily c-terminal domain SPYM_RS00030 SM00982 SPYM_RS00030 SPYM_RS00030 SM01058 CarD-like/TRCF domain SPYM_RS00035 SM00363 S4 RNA-binding domain SPYM_RS00060 SM00382 ATPases associated with a variety of cellular activities SPYM_RS00240 SM01400 SPYM_RS00240 SPYM_RS00265 SM01211 SPYM_RS00265 SPYM_RS00295 SM01209 SPYM_RS00295 SPYM_RS00295 SM01210 SPYM_RS00295 SPYM_RS00300 SM01001 AIR carboxylase SPYM_RS00315 SM00998 Adenylosuccinate lyase C-terminus SPYM_RS00320 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS00325 SM00382 ATPases associated with a variety of cellular activities SPYM_RS00330 SM00226 Low molecular weight phosphatase family SPYM_RS00335 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SPYM_RS00350 SM00829 Enoylreductase SPYM_RS00365 SM01403 SPYM_RS00365 SPYM_RS00385 SM01382 SPYM_RS00385 SPYM_RS00385 SM01383 SPYM_RS00385 SPYM_RS00400 SM00322 K homology RNA-binding domain SPYM_RS00420 SM01374 SPYM_RS00420 SPYM_RS00425 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPYM_RS00480 SM00316 Ribosomal protein S1-like RNA-binding domain SPYM_RS00495 SM00662 RNA polymerases D SPYM_RS00600 SM00347 helix_turn_helix multiple antibiotic resistance protein SPYM_RS00605 SM00382 ATPases associated with a variety of cellular activities SPYM_RS00620 SM00363 S4 RNA-binding domain SPYM_RS00635 SM00663 RNA polymerase I subunit A N-terminus SPYM_RS00775 SM00342 helix_turn_helix, arabinose operon control protein SPYM_RS00805 SM00882 Coenzyme A transferase SPYM_RS00810 SM00882 Coenzyme A transferase SPYM_RS00885 SM00788 Adenylosuccinate synthetase SPYM_RS00895 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SPYM_RS00895 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPYM_RS00955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPYM_RS00965 SM01007 Class II Aldolase and Adducin N-terminal domain SPYM_RS00980 SM00382 ATPases associated with a variety of cellular activities SPYM_RS00990 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SPYM_RS00990 SM00474 3'-5' exonuclease SPYM_RS00990 SM00475 5'-3' exonuclease SPYM_RS00990 SM00482 DNA polymerase A domain SPYM_RS00995 SM00881 CoA binding domain SPYM_RS01020 SM00849 Metallo-beta-lactamase superfamily SPYM_RS01030 SM00460 Transglutaminase/protease-like homologues SPYM_RS01070 SM00347 helix_turn_helix multiple antibiotic resistance protein SPYM_RS01075 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01080 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01095 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01100 SM00947 Carbonic anhydrase SPYM_RS01125 SM00448 cheY-homologous receiver domain SPYM_RS01125 SM00850 LytTr DNA-binding domain SPYM_RS01140 SM00393 Putative single-stranded nucleic acids-binding domain SPYM_RS01140 SM01245 SPYM_RS01140 SPYM_RS01175 SM01130 SPYM_RS01175 SPYM_RS01200 SM00650 Ribosomal RNA adenine dimethylases SPYM_RS01215 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SPYM_RS01250 SM00838 Elongation factor G C-terminus SPYM_RS01250 SM00889 Elongation factor G, domain IV SPYM_RS01255 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPYM_RS01260 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01265 SM00062 Bacterial periplasmic substrate-binding proteins SPYM_RS01290 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01320 SM00936 Penicillin-binding protein 5, C-terminal domain SPYM_RS01340 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01345 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01470 SM01120 SPYM_RS01470 SPYM_RS01470 SM01121 SPYM_RS01470 SPYM_RS01475 SM00244 prohibitin homologues SPYM_RS01495 SM00422 helix_turn_helix, mercury resistance SPYM_RS01500 SM01230 SPYM_RS01500 SPYM_RS01505 SM00849 Metallo-beta-lactamase superfamily SPYM_RS01535 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS01550 SM01133 SPYM_RS01550 SPYM_RS01565 SM00479 SPYM_RS01565 SPYM_RS01570 SM00422 helix_turn_helix, mercury resistance SPYM_RS01580 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS01585 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS01590 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SPYM_RS01590 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SPYM_RS01595 SM00419 helix_turn_helix, cAMP Regulatory protein SPYM_RS01640 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01665 SM00463 Small MutS-related domain SPYM_RS01665 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPYM_RS01665 SM00534 ATPase domain of DNA mismatch repair MUTS family SPYM_RS01670 SM00014 Acid phosphatase homologues SPYM_RS01680 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS01685 SM00478 endonuclease III SPYM_RS01720 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01735 SM00841 Elongation factor P, C-terminal SPYM_RS01735 SM01185 SPYM_RS01735 SPYM_RS01750 SM00354 helix_turn _helix lactose operon repressor SPYM_RS01755 SM00640 Glycosyl hydrolases family 32 SPYM_RS01780 SM00957 SecA DEAD-like domain SPYM_RS01780 SM00958 SecA preprotein cross-linking domain SPYM_RS01790 SM01005 Alanine racemase, C-terminal domain SPYM_RS01800 SM00365 Leucine-rich repeat, SDS22-like subfamily SPYM_RS01800 SM00369 Leucine-rich repeats, typical (most populated) subfamily SPYM_RS01800 SM00725 NEAr Transporter domain SPYM_RS01820 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01825 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01830 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01845 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01850 SM00487 DEAD-like helicases superfamily SPYM_RS01850 SM00490 helicase superfamily c-terminal domain SPYM_RS01855 SM00382 ATPases associated with a variety of cellular activities SPYM_RS01865 SM00870 SPYM_RS01865 SPYM_RS01910 SM00845 GatB domain SPYM_RS01925 SM00855 Phosphoglycerate mutase family SPYM_RS01935 SM00047 Lysozyme subfamily 2 SPYM_RS01955 SM00271 DnaJ molecular chaperone homology domain SPYM_RS01965 SM00347 helix_turn_helix multiple antibiotic resistance protein SPYM_RS01985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SPYM_RS01990 SM00822 SPYM_RS01990 SPYM_RS01995 SM00825 Beta-ketoacyl synthase SPYM_RS02010 SM00878 Biotin carboxylase C-terminal domain SPYM_RS02085 SM00382 ATPases associated with a variety of cellular activities SPYM_RS02115 SM00322 K homology RNA-binding domain SPYM_RS02160 SM00420 helix_turn_helix, Deoxyribose operon repressor SPYM_RS02160 SM01134 SPYM_RS02160 SPYM_RS02195 SM01133 SPYM_RS02195 SPYM_RS02295 SM00861 Transketolase, pyrimidine binding domain SPYM_RS02305 SM00382 ATPases associated with a variety of cellular activities SPYM_RS02340 SM00740 SPYM_RS02340 SPYM_RS02350 SM00487 DEAD-like helicases superfamily SPYM_RS02350 SM00490 helicase superfamily c-terminal domain SPYM_RS02360 SM00382 ATPases associated with a variety of cellular activities SPYM_RS02415 SM00981 SPYM_RS02415 SPYM_RS02445 SM00882 Coenzyme A transferase SPYM_RS02460 SM00322 K homology RNA-binding domain SPYM_RS02460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPYM_RS02465 SM00072 Guanylate kinase homologues. SPYM_RS02470 SM01409 SPYM_RS02470 SPYM_RS02475 SM00487 DEAD-like helicases superfamily SPYM_RS02475 SM00490 helicase superfamily c-terminal domain SPYM_RS02490 SM00331 Sigma factor PP2C-like phosphatases SPYM_RS02490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SPYM_RS02495 SM00220 Serine/Threonine protein kinases, catalytic domain SPYM_RS02495 SM00740 SPYM_RS02495 SPYM_RS02505 SM00387 Histidine kinase-like ATPases SPYM_RS02510 SM00421 helix_turn_helix, Lux Regulon SPYM_RS02510 SM00448 cheY-homologous receiver domain SPYM_RS02520 SM00316 Ribosomal protein S1-like RNA-binding domain SPYM_RS02535 SM00487 DEAD-like helicases superfamily SPYM_RS02535 SM00490 helicase superfamily c-terminal domain SPYM_RS02625 SM00974 SPYM_RS02625 SPYM_RS02655 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS02870 SM00047 Lysozyme subfamily 2 SPYM_RS02890 SM00892 DNA/RNA non-specific endonuclease SPYM_RS02910 SM00872 Alpha mannosidase, middle domain SPYM_RS02915 SM01149 SPYM_RS02915 SPYM_RS02920 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS02960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPYM_RS02965 SM00342 helix_turn_helix, arabinose operon control protein SPYM_RS02965 SM00448 cheY-homologous receiver domain SPYM_RS03065 SM00342 helix_turn_helix, arabinose operon control protein SPYM_RS03065 SM00448 cheY-homologous receiver domain SPYM_RS03070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPYM_RS03070 SM00387 Histidine kinase-like ATPases SPYM_RS03080 SM00873 B3/4 domain SPYM_RS03090 SM00419 helix_turn_helix, cAMP Regulatory protein SPYM_RS03145 SM00354 helix_turn _helix lactose operon repressor SPYM_RS03180 SM00450 Rhodanese Homology Domain SPYM_RS03185 SM00838 Elongation factor G C-terminus SPYM_RS03210 SM00842 Cell division protein FtsA SPYM_RS03215 SM00864 Tubulin/FtsZ family, GTPase domain SPYM_RS03215 SM00865 Tubulin/FtsZ family, C-terminal domain SPYM_RS03235 SM00363 S4 RNA-binding domain SPYM_RS03260 SM00382 ATPases associated with a variety of cellular activities SPYM_RS03260 SM01086 C-terminal, D2-small domain, of ClpB protein SPYM_RS03275 SM00382 ATPases associated with a variety of cellular activities SPYM_RS03315 SM00363 S4 RNA-binding domain SPYM_RS03350 SM00411 bacterial (prokaryotic) histone like domain SPYM_RS03370 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS03380 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS03470 SM00507 HNH nucleases SPYM_RS03610 SM00047 Lysozyme subfamily 2 SPYM_RS03610 SM01095 Cpl-7 lysozyme C-terminal domain SPYM_RS03625 SM00892 DNA/RNA non-specific endonuclease SPYM_RS03645 SM00855 Phosphoglycerate mutase family SPYM_RS03670 SM00493 SPYM_RS03670 SPYM_RS03695 SM00487 DEAD-like helicases superfamily SPYM_RS03695 SM00490 helicase superfamily c-terminal domain SPYM_RS03715 SM00563 Phosphate acyltransferases SPYM_RS03720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPYM_RS03725 SM00849 Metallo-beta-lactamase superfamily SPYM_RS03770 SM00363 S4 RNA-binding domain SPYM_RS03800 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPYM_RS03805 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS03875 SM00487 DEAD-like helicases superfamily SPYM_RS03875 SM00490 helicase superfamily c-terminal domain SPYM_RS03900 SM00382 ATPases associated with a variety of cellular activities SPYM_RS03910 SM00364 Leucine-rich repeats, bacterial type SPYM_RS03910 SM00365 Leucine-rich repeat, SDS22-like subfamily SPYM_RS03910 SM00369 Leucine-rich repeats, typical (most populated) subfamily SPYM_RS03935 SM00116 Domain in cystathionine beta-synthase and other proteins. SPYM_RS03995 SM00363 S4 RNA-binding domain SPYM_RS04085 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04090 SM00062 Bacterial periplasmic substrate-binding proteins SPYM_RS04090 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPYM_RS04095 SM00487 DEAD-like helicases superfamily SPYM_RS04095 SM00490 helicase superfamily c-terminal domain SPYM_RS04155 SM00354 helix_turn _helix lactose operon repressor SPYM_RS04185 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04190 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS04195 SM00481 DNA polymerase alpha chain like domain SPYM_RS04230 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04235 SM00062 Bacterial periplasmic substrate-binding proteins SPYM_RS04290 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS04300 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04330 SM00904 Riboflavin kinase SPYM_RS04370 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04375 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04390 SM00448 cheY-homologous receiver domain SPYM_RS04390 SM00862 Transcriptional regulatory protein, C terminal SPYM_RS04395 SM00387 Histidine kinase-like ATPases SPYM_RS04395 SM00388 His Kinase A (phosphoacceptor) domain SPYM_RS04425 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04480 SM00506 Appr-1"-p processing enzyme SPYM_RS04500 SM00155 Phospholipase D. Active site motifs. SPYM_RS04510 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS04525 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04545 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS04545 SM00866 SPYM_RS04545 SPYM_RS04555 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04555 SM00962 SRP54-type protein, GTPase domain SPYM_RS04555 SM00963 SRP54-type protein, helical bundle domain SPYM_RS04560 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS04575 SM00764 Citrate lyase ligase C-terminal domain SPYM_RS04630 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS04630 SM00895 SPYM_RS04630 SPYM_RS04665 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPYM_RS04665 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPYM_RS04665 SM00493 SPYM_RS04665 SPYM_RS04715 SM00434 DNA Topoisomerase IV SPYM_RS04730 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04735 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04770 SM00937 SPYM_RS04770 SPYM_RS04800 SM01240 SPYM_RS04800 SPYM_RS04810 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04840 SM00954 Region found in RelA / SpoT proteins SPYM_RS04845 SM01118 SPYM_RS04845 SPYM_RS04850 SM01400 SPYM_RS04850 SPYM_RS04865 SM00881 CoA binding domain SPYM_RS04900 SM00829 Enoylreductase SPYM_RS04905 SM00919 Malic enzyme, NAD binding domain SPYM_RS04905 SM01274 SPYM_RS04905 SPYM_RS04915 SM00091 PAS domain SPYM_RS04920 SM00448 cheY-homologous receiver domain SPYM_RS04940 SM00382 ATPases associated with a variety of cellular activities SPYM_RS04955 SM00905 Dihydroneopterin aldolase SPYM_RS04980 SM00936 Penicillin-binding protein 5, C-terminal domain SPYM_RS05015 SM00465 GIY-YIG type nucleases (URI domain) SPYM_RS05030 SM00342 helix_turn_helix, arabinose operon control protein SPYM_RS05030 SM00448 cheY-homologous receiver domain SPYM_RS05095 SM00729 Elongator protein 3, MiaB family, Radical SAM SPYM_RS05155 SM00861 Transketolase, pyrimidine binding domain SPYM_RS05165 SM00382 ATPases associated with a variety of cellular activities SPYM_RS05180 SM00849 Metallo-beta-lactamase superfamily SPYM_RS05185 SM00382 ATPases associated with a variety of cellular activities SPYM_RS05205 SM00028 Tetratricopeptide repeats SPYM_RS05230 SM00641 Glycosyl hydrolases family 25 SPYM_RS05370 SM00487 DEAD-like helicases superfamily SPYM_RS05375 SM00990 SPYM_RS05375 SPYM_RS05380 SM00885 D5 N terminal like SPYM_RS05385 SM00482 DNA polymerase A domain SPYM_RS05435 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS05485 SM00478 endonuclease III SPYM_RS05485 SM00525 SPYM_RS05485 SPYM_RS05540 SM00450 Rhodanese Homology Domain SPYM_RS05555 SM00316 Ribosomal protein S1-like RNA-binding domain SPYM_RS05580 SM00434 DNA Topoisomerase IV SPYM_RS05590 SM00387 Histidine kinase-like ATPases SPYM_RS05590 SM00433 TopoisomeraseII SPYM_RS05595 SM01207 SPYM_RS05595 SPYM_RS05605 SM00986 Uracil DNA glycosylase superfamily SPYM_RS05605 SM00987 UreE urease accessory protein, C-terminal domain SPYM_RS05615 SM00062 Bacterial periplasmic substrate-binding proteins SPYM_RS05630 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPYM_RS05675 SM00382 ATPases associated with a variety of cellular activities SPYM_RS05675 SM01086 C-terminal, D2-small domain, of ClpB protein SPYM_RS05690 SM00382 ATPases associated with a variety of cellular activities SPYM_RS05690 SM00994 ClpX C4-type zinc finger SPYM_RS05690 SM01086 C-terminal, D2-small domain, of ClpB protein SPYM_RS05740 SM00387 Histidine kinase-like ATPases SPYM_RS05740 SM00388 His Kinase A (phosphoacceptor) domain SPYM_RS05745 SM00448 cheY-homologous receiver domain SPYM_RS05745 SM00862 Transcriptional regulatory protein, C terminal SPYM_RS05750 SM00954 Region found in RelA / SpoT proteins SPYM_RS05770 SM00382 ATPases associated with a variety of cellular activities SPYM_RS05810 SM00047 Lysozyme subfamily 2 SPYM_RS05815 SM00047 Lysozyme subfamily 2 SPYM_RS05830 SM00420 helix_turn_helix, Deoxyribose operon repressor SPYM_RS05830 SM01134 SPYM_RS05830 SPYM_RS05900 SM00382 ATPases associated with a variety of cellular activities SPYM_RS05910 SM00851 MGS-like domain SPYM_RS05910 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPYM_RS05910 SM01209 SPYM_RS05910 SPYM_RS05915 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SPYM_RS05935 SM00363 S4 RNA-binding domain SPYM_RS05965 SM00854 Bacterial capsule synthesis protein PGA_cap SPYM_RS05970 SM00981 SPYM_RS05970 SPYM_RS06090 SM00382 ATPases associated with a variety of cellular activities SPYM_RS06125 SM00400 zinc finger SPYM_RS06125 SM00493 SPYM_RS06125 SPYM_RS06140 SM00062 Bacterial periplasmic substrate-binding proteins SPYM_RS06140 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPYM_RS06160 SM00382 ATPases associated with a variety of cellular activities SPYM_RS06180 SM00873 B3/4 domain SPYM_RS06180 SM00874 tRNA synthetase B5 domain SPYM_RS06180 SM00896 Ferredoxin-fold anticodon binding domain SPYM_RS06215 SM00382 ATPases associated with a variety of cellular activities SPYM_RS06250 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPYM_RS06255 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPYM_RS06255 SM00292 breast cancer carboxy-terminal domain SPYM_RS06255 SM00532 Ligase N family SPYM_RS06280 SM00382 ATPases associated with a variety of cellular activities SPYM_RS06315 SM01192 SPYM_RS06315 SPYM_RS06315 SM01193 SPYM_RS06315 SPYM_RS06330 SM00387 Histidine kinase-like ATPases SPYM_RS06330 SM00433 TopoisomeraseII SPYM_RS06355 SM00830 Chorismate mutase type II SPYM_RS06380 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS06380 SM00866 SPYM_RS06380 SPYM_RS06395 SM00892 DNA/RNA non-specific endonuclease SPYM_RS06405 SM00047 Lysozyme subfamily 2 SPYM_RS06530 SM00507 HNH nucleases SPYM_RS06655 SM01040 BRO family, N-terminal domain SPYM_RS06660 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS06670 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS06680 SM00857 Resolvase, N terminal domain SPYM_RS06710 SM00479 SPYM_RS06710 SPYM_RS06710 SM00487 DEAD-like helicases superfamily SPYM_RS06710 SM00491 SPYM_RS06710 SPYM_RS06720 SM00849 Metallo-beta-lactamase superfamily SPYM_RS06730 SM00382 ATPases associated with a variety of cellular activities SPYM_RS06735 SM00937 SPYM_RS06735 SPYM_RS06800 SM00354 helix_turn _helix lactose operon repressor SPYM_RS06805 SM00831 Cation transporter/ATPase, N-terminus SPYM_RS06815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPYM_RS06895 SM00855 Phosphoglycerate mutase family SPYM_RS06960 SM00731 SprT homologues. SPYM_RS06965 SM00316 Ribosomal protein S1-like RNA-binding domain SPYM_RS06965 SM00732 Likely ribonuclease with RNase H fold. SPYM_RS06995 SM01061 CAT RNA binding domain SPYM_RS07005 SM00382 ATPases associated with a variety of cellular activities SPYM_RS07005 SM00962 SRP54-type protein, GTPase domain SPYM_RS07005 SM00963 SRP54-type protein, helical bundle domain SPYM_RS07120 SM00984 UDP binding domain SPYM_RS07170 SM00968 SMC proteins Flexible Hinge Domain SPYM_RS07175 SM00358 Double-stranded RNA binding motif SPYM_RS07175 SM00535 Ribonuclease III family SPYM_RS07180 SM00849 Metallo-beta-lactamase superfamily SPYM_RS07185 SM00091 PAS domain SPYM_RS07185 SM00387 Histidine kinase-like ATPases SPYM_RS07185 SM00388 His Kinase A (phosphoacceptor) domain SPYM_RS07190 SM00448 cheY-homologous receiver domain SPYM_RS07190 SM00862 Transcriptional regulatory protein, C terminal SPYM_RS07225 SM01120 SPYM_RS07225 SPYM_RS07255 SM00382 ATPases associated with a variety of cellular activities SPYM_RS07260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPYM_RS07275 SM00354 helix_turn _helix lactose operon repressor SPYM_RS07325 SM00316 Ribosomal protein S1-like RNA-binding domain SPYM_RS07325 SM00955 SPYM_RS07325 SPYM_RS07350 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SPYM_RS07350 SM01232 SPYM_RS07350 SPYM_RS07355 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS07440 SM00986 Uracil DNA glycosylase superfamily SPYM_RS07440 SM00987 UreE urease accessory protein, C-terminal domain SPYM_RS07455 SM00257 Lysin motif SPYM_RS07490 SM00649 Ribosomal protein L11/L12 SPYM_RS07495 SM00382 ATPases associated with a variety of cellular activities SPYM_RS07495 SM00843 SPYM_RS07495 SPYM_RS07510 SM00382 ATPases associated with a variety of cellular activities SPYM_RS07520 SM00529 Helix-turn-helix diphteria tox regulatory element SPYM_RS07520 SM00899 SPYM_RS07520 SPYM_RS07700 SM00382 ATPases associated with a variety of cellular activities SPYM_RS07725 SM01131 SPYM_RS07725 SPYM_RS07735 SM01091 Transporter associated domain SPYM_RS07745 SM00729 Elongator protein 3, MiaB family, Radical SAM SPYM_RS07750 SM00014 Acid phosphatase homologues SPYM_RS07765 SM01234 SPYM_RS07765 SPYM_RS07770 SM00363 S4 RNA-binding domain SPYM_RS07790 SM00116 Domain in cystathionine beta-synthase and other proteins. SPYM_RS07825 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPYM_RS07865 SM00487 DEAD-like helicases superfamily SPYM_RS07865 SM00490 helicase superfamily c-terminal domain SPYM_RS07890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPYM_RS07890 SM00387 Histidine kinase-like ATPases SPYM_RS07890 SM00388 His Kinase A (phosphoacceptor) domain SPYM_RS07895 SM00448 cheY-homologous receiver domain SPYM_RS07895 SM00862 Transcriptional regulatory protein, C terminal SPYM_RS07945 SM00382 ATPases associated with a variety of cellular activities SPYM_RS07945 SM00930 SPYM_RS07945 SPYM_RS07955 SM00062 Bacterial periplasmic substrate-binding proteins SPYM_RS07980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPYM_RS07990 SM01103 SPYM_RS07990 SPYM_RS08045 SM00487 DEAD-like helicases superfamily SPYM_RS08065 SM00421 helix_turn_helix, Lux Regulon SPYM_RS08065 SM00448 cheY-homologous receiver domain SPYM_RS08080 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08110 SM01133 SPYM_RS08110 SPYM_RS08130 SM00420 helix_turn_helix, Deoxyribose operon repressor SPYM_RS08130 SM01134 SPYM_RS08130 SPYM_RS08160 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS08180 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPYM_RS08195 SM00840 SPYM_RS08195 SPYM_RS08220 SM00316 Ribosomal protein S1-like RNA-binding domain SPYM_RS08220 SM00322 K homology RNA-binding domain SPYM_RS08245 SM01387 SPYM_RS08245 SPYM_RS08265 SM00347 helix_turn_helix multiple antibiotic resistance protein SPYM_RS08270 SM00479 SPYM_RS08270 SPYM_RS08270 SM00481 DNA polymerase alpha chain like domain SPYM_RS08295 SM01323 SPYM_RS08295 SPYM_RS08305 SM00642 Alpha-amylase domain SPYM_RS08310 SM00642 Alpha-amylase domain SPYM_RS08315 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPYM_RS08335 SM00954 Region found in RelA / SpoT proteins SPYM_RS08390 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08430 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08435 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPYM_RS08485 SM00387 Histidine kinase-like ATPases SPYM_RS08485 SM00388 His Kinase A (phosphoacceptor) domain SPYM_RS08490 SM00448 cheY-homologous receiver domain SPYM_RS08490 SM00862 Transcriptional regulatory protein, C terminal SPYM_RS08500 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08545 SM00892 DNA/RNA non-specific endonuclease SPYM_RS08590 SM00420 helix_turn_helix, Deoxyribose operon repressor SPYM_RS08590 SM01134 SPYM_RS08590 SPYM_RS08635 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS08645 SM00883 Chaperonin 10 Kd subunit SPYM_RS08650 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08650 SM01086 C-terminal, D2-small domain, of ClpB protein SPYM_RS08660 SM00357 Cold shock protein domain SPYM_RS08690 SM01221 SPYM_RS08690 SPYM_RS08690 SM01222 SPYM_RS08690 SPYM_RS08725 SM00028 Tetratricopeptide repeats SPYM_RS08725 SM01043 Bacterial transcriptional activator domain SPYM_RS08750 SM00642 Alpha-amylase domain SPYM_RS08760 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPYM_RS08760 SM00866 SPYM_RS08760 SPYM_RS08810 SM00732 Likely ribonuclease with RNase H fold. SPYM_RS08825 SM00382 ATPases associated with a variety of cellular activities SPYM_RS08830 SM00852 Probable molybdopterin binding domain SPYM_RS08840 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPYM_RS08850 SM00853 MutL C terminal dimerisation domain SPYM_RS08850 SM01340 SPYM_RS08850 SPYM_RS08870 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS08875 SM00530 Helix-turn-helix XRE-family like proteins SPYM_RS08900 SM00942 Primase C terminal 1 (PriCT-1) SPYM_RS08905 SM00885 D5 N terminal like SPYM_RS08945 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPYM_RS08945 SM00534 ATPase domain of DNA mismatch repair MUTS family SPYM_RS08960 SM00836 DALR anticodon binding domain SPYM_RS08960 SM01016 Arginyl tRNA synthetase N terminal dom SPYM_RS09010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPYM_RS09070 SM00363 S4 RNA-binding domain SPYM_RS09070 SM01390 SPYM_RS09070 SPYM_RS09095 SM01228 SPYM_RS09095 SPYM_RS09130 SM00382 ATPases associated with a variety of cellular activities SPYM_RS09135 SM00382 ATPases associated with a variety of cellular activities SPYM_RS09170 SM00984 UDP binding domain SPYM_RS09195 SM00116 Domain in cystathionine beta-synthase and other proteins. SPYM_RS09195 SM01240 SPYM_RS09195 SPYM_RS09210 SM00382 ATPases associated with a variety of cellular activities SPYM_RS09245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPYM_RS09250 SM00470 ParB-like nuclease domain