locus-tag class description FY406_RS00010 PF00149 Calcineurin-like phosphoesterase FY406_RS00010 PF02872 5'-nucleotidase, C-terminal domain FY406_RS00015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY406_RS00015 PF01588 Putative tRNA binding domain FY406_RS00015 PF03147 Ferredoxin-fold anticodon binding domain FY406_RS00015 PF03484 tRNA synthetase B5 domain FY406_RS00015 PF03483 B3/4 domain FY406_RS00020 PF13673 Acetyltransferase (GNAT) domain FY406_RS00035 PF02463 RecF/RecN/SMC N terminal domain FY406_RS00035 PF06470 SMC proteins Flexible Hinge Domain FY406_RS00040 PF00035 Double-stranded RNA binding motif FY406_RS00040 PF14622 Ribonuclease-III-like FY406_RS00055 PF00753 Metallo-beta-lactamase superfamily FY406_RS00060 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS00060 PF13426 PAS domain FY406_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS00060 PF00672 HAMP domain FY406_RS00065 PF00072 Response regulator receiver domain FY406_RS00065 PF00486 Transcriptional regulatory protein, C terminal FY406_RS00070 PF00005 ABC transporter FY406_RS00075 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS00090 PF01223 DNA/RNA non-specific endonuclease FY406_RS00100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY406_RS00110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY406_RS00110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FY406_RS00115 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY406_RS00115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY406_RS00120 PF00231 ATP synthase FY406_RS00125 PF00306 ATP synthase alpha/beta chain, C terminal domain FY406_RS00125 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY406_RS00125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY406_RS00130 PF00213 ATP synthase delta (OSCP) subunit FY406_RS00135 PF00430 ATP synthase B/B' CF(0) FY406_RS00140 PF00119 ATP synthase A chain FY406_RS00145 PF00137 ATP synthase subunit C FY406_RS00150 PF00343 Carbohydrate phosphorylase FY406_RS00155 PF00534 Glycosyl transferases group 1 FY406_RS00155 PF08323 Starch synthase catalytic domain FY406_RS00160 PF00483 Nucleotidyl transferase FY406_RS00165 PF00483 Nucleotidyl transferase FY406_RS00170 PF00128 Alpha amylase, catalytic domain FY406_RS00170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY406_RS00170 PF02806 Alpha amylase, C-terminal all-beta domain FY406_RS00175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY406_RS00175 PF00128 Alpha amylase, catalytic domain FY406_RS00175 PF17999 Pullulanase N1-terminal domain FY406_RS00180 PF00781 Diacylglycerol kinase catalytic domain FY406_RS00185 PF12826 Helix-hairpin-helix motif FY406_RS00185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY406_RS00185 PF00533 BRCA1 C Terminus (BRCT) domain FY406_RS00185 PF03120 NAD-dependent DNA ligase OB-fold domain FY406_RS00185 PF01653 NAD-dependent DNA ligase adenylation domain FY406_RS00190 PF06177 QueT transporter FY406_RS00195 PF04138 GtrA-like protein FY406_RS00200 PF00196 Bacterial regulatory proteins, luxR family FY406_RS00200 PF00072 Response regulator receiver domain FY406_RS00205 PF07730 Histidine kinase FY406_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS00215 PF00005 ABC transporter FY406_RS00220 PF03631 Virulence factor BrkB FY406_RS00225 PF00557 Metallopeptidase family M24 FY406_RS00230 PF00392 Bacterial regulatory proteins, gntR family FY406_RS00230 PF07085 DRTGG domain FY406_RS00230 PF00571 CBS domain FY406_RS00230 PF03061 Thioesterase superfamily FY406_RS00235 PF13673 Acetyltransferase (GNAT) domain FY406_RS00235 PF00958 GMP synthase C terminal domain FY406_RS00235 PF00117 Glutamine amidotransferase class-I FY406_RS00235 PF03352 Methyladenine glycosylase FY406_RS00235 PF13302 Acetyltransferase (GNAT) domain FY406_RS00240 PF00248 Aldo/keto reductase family FY406_RS00245 PF00258 Flavodoxin FY406_RS00250 PF00343 Carbohydrate phosphorylase FY406_RS00255 PF02446 4-alpha-glucanotransferase FY406_RS00260 PF00356 Bacterial regulatory proteins, lacI family FY406_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS00275 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS00280 PF03459 TOBE domain FY406_RS00280 PF17912 MalK OB fold domain FY406_RS00280 PF00005 ABC transporter FY406_RS00285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY406_RS00290 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY406_RS00290 PF02772 S-adenosylmethionine synthetase, central domain FY406_RS00290 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY406_RS00300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY406_RS00305 PF02237 Biotin protein ligase C terminal domain FY406_RS00305 PF08279 HTH domain FY406_RS00305 PF03099 Biotin/lipoate A/B protein ligase family FY406_RS00315 PF12169 DNA polymerase III subunits gamma and tau domain III FY406_RS00320 PF13185 GAF domain FY406_RS00325 PF03575 Peptidase family S51 FY406_RS00330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY406_RS00330 PF02805 Metal binding domain of Ada FY406_RS00330 PF12833 Helix-turn-helix domain FY406_RS00330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY406_RS00335 PF08468 Methyltransferase small domain N-terminal FY406_RS00335 PF05175 Methyltransferase small domain FY406_RS00340 PF13673 Acetyltransferase (GNAT) domain FY406_RS00340 PF04229 GrpB protein FY406_RS00350 PF00230 Major intrinsic protein FY406_RS00360 PF00694 Aconitase C-terminal domain FY406_RS00365 PF00330 Aconitase family (aconitate hydratase) FY406_RS00375 PF00180 Isocitrate/isopropylmalate dehydrogenase FY406_RS00380 PF08502 LeuA allosteric (dimerisation) domain FY406_RS00380 PF00682 HMGL-like FY406_RS00390 PF00485 Phosphoribulokinase / Uridine kinase family FY406_RS00395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY406_RS00400 PF00271 Helicase conserved C-terminal domain FY406_RS00400 PF00270 DEAD/DEAH box helicase FY406_RS00405 PF01293 Phosphoenolpyruvate carboxykinase FY406_RS00410 PF00171 Aldehyde dehydrogenase family FY406_RS00415 PF02896 PEP-utilising enzyme, TIM barrel domain FY406_RS00415 PF00391 PEP-utilising enzyme, mobile domain FY406_RS00415 PF05524 PEP-utilising enzyme, N-terminal FY406_RS00420 PF00381 PTS HPr component phosphorylation site FY406_RS00435 PF00180 Isocitrate/isopropylmalate dehydrogenase FY406_RS00440 PF00285 Citrate synthase, C-terminal domain FY406_RS00445 PF00330 Aconitase family (aconitate hydratase) FY406_RS00445 PF00694 Aconitase C-terminal domain FY406_RS00450 PF00462 Glutaredoxin FY406_RS00455 PF02867 Ribonucleotide reductase, barrel domain FY406_RS00455 PF00317 Ribonucleotide reductase, all-alpha domain FY406_RS00455 PF08343 Ribonucleotide reductase N-terminal FY406_RS00460 PF00268 Ribonucleotide reductase, small chain FY406_RS00465 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY406_RS00470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY406_RS00470 PF00925 GTP cyclohydrolase II FY406_RS00475 PF00677 Lumazine binding domain FY406_RS00480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY406_RS00480 PF01872 RibD C-terminal domain FY406_RS00485 PF00202 Aminotransferase class-III FY406_RS00490 PF00696 Amino acid kinase family FY406_RS00495 PF01960 ArgJ family FY406_RS00500 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY406_RS00500 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY406_RS00525 PF00005 ABC transporter FY406_RS00530 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS00535 PF00072 Response regulator receiver domain FY406_RS00535 PF00486 Transcriptional regulatory protein, C terminal FY406_RS00550 PF00005 ABC transporter FY406_RS00560 PF00005 ABC transporter FY406_RS00585 PF01411 tRNA synthetases class II (A) FY406_RS00585 PF02272 DHHA1 domain FY406_RS00585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY406_RS00595 PF13145 PPIC-type PPIASE domain FY406_RS00600 PF01596 O-methyltransferase FY406_RS00605 PF13419 Haloacid dehalogenase-like hydrolase FY406_RS00610 PF08439 Oligopeptidase F FY406_RS00610 PF01432 Peptidase family M3 FY406_RS00630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY406_RS00640 PF02547 Queuosine biosynthesis protein FY406_RS00660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY406_RS00660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY406_RS00675 PF03772 Competence protein FY406_RS00675 PF13567 Domain of unknown function (DUF4131) FY406_RS00675 PF00753 Metallo-beta-lactamase superfamily FY406_RS00680 PF10531 SLBB domain FY406_RS00685 PF01553 Acyltransferase FY406_RS00695 PF05175 Methyltransferase small domain FY406_RS00715 PF00270 DEAD/DEAH box helicase FY406_RS00715 PF00271 Helicase conserved C-terminal domain FY406_RS00720 PF00746 LPXTG cell wall anchor motif FY406_RS00720 PF07501 G5 domain FY406_RS00720 PF17041 E domain FY406_RS00720 PF04650 YSIRK type signal peptide FY406_RS00725 PF11208 Protein of unknown function (DUF2992) FY406_RS00735 PF00009 Elongation factor Tu GTP binding domain FY406_RS00735 PF16658 Class II release factor RF3, C-terminal domain FY406_RS00735 PF03144 Elongation factor Tu domain 2 FY406_RS00750 PF08245 Mur ligase middle domain FY406_RS00750 PF02875 Mur ligase family, glutamate ligase domain FY406_RS00750 PF01225 Mur ligase family, catalytic domain FY406_RS00755 PF07155 ECF-type riboflavin transporter, S component FY406_RS00760 PF01820 D-ala D-ala ligase N-terminus FY406_RS00760 PF07478 D-ala D-ala ligase C-terminus FY406_RS00765 PF13662 Toprim domain FY406_RS00765 PF02132 RecR protein FY406_RS00770 PF00905 Penicillin binding protein transpeptidase domain FY406_RS00770 PF03717 Penicillin-binding Protein dimerisation domain FY406_RS00775 PF00300 Histidine phosphatase superfamily (branch 1) FY406_RS00780 PF00893 Small Multidrug Resistance protein FY406_RS00785 PF00403 Heavy-metal-associated domain FY406_RS00795 PF01180 Dihydroorotate dehydrogenase FY406_RS00805 PF01475 Ferric uptake regulator family FY406_RS00810 PF00216 Bacterial DNA-binding protein FY406_RS00820 PF13472 GDSL-like Lipase/Acylhydrolase family FY406_RS00825 PF02645 Uncharacterised protein, DegV family COG1307 FY406_RS00830 PF13476 AAA domain FY406_RS00835 PF01316 Arginine repressor, DNA binding domain FY406_RS00835 PF02863 Arginine repressor, C-terminal domain FY406_RS00840 PF01728 FtsJ-like methyltransferase FY406_RS00840 PF01479 S4 domain FY406_RS00845 PF00348 Polyprenyl synthetase FY406_RS00850 PF02609 Exonuclease VII small subunit FY406_RS00855 PF02601 Exonuclease VII, large subunit FY406_RS00855 PF13742 OB-fold nucleic acid binding domain FY406_RS00860 PF07694 5TMR of 5TMR-LYT FY406_RS00860 PF06580 Histidine kinase FY406_RS00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS00865 PF00072 Response regulator receiver domain FY406_RS00865 PF04397 LytTr DNA-binding domain FY406_RS00870 PF03788 LrgA family FY406_RS00875 PF04172 LrgB-like family FY406_RS00880 PF01256 Carbohydrate kinase FY406_RS00885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY406_RS00885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY406_RS00895 PF17910 FeoB cytosolic helical domain FY406_RS00895 PF02421 Ferrous iron transport protein B FY406_RS00895 PF07670 Nucleoside recognition FY406_RS00895 PF07664 Ferrous iron transport protein B C terminus FY406_RS00905 PF00005 ABC transporter FY406_RS00910 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS00915 PF08796 Protein of unknown function (DUF1797) FY406_RS00920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY406_RS00920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY406_RS00925 PF00004 ATPase family associated with various cellular activities (AAA) FY406_RS00925 PF07724 AAA domain (Cdc48 subfamily) FY406_RS00925 PF17871 AAA lid domain FY406_RS00925 PF10431 C-terminal, D2-small domain, of ClpB protein FY406_RS00930 PF00293 NUDIX domain FY406_RS00940 PF08264 Anticodon-binding domain of tRNA FY406_RS00940 PF06827 Zinc finger found in FPG and IleRS FY406_RS00940 PF00133 tRNA synthetases class I (I, L, M and V) FY406_RS00945 PF05103 DivIVA protein FY406_RS00960 PF04472 Cell division protein SepF FY406_RS00965 PF01168 Alanine racemase, N-terminal domain FY406_RS00970 PF12327 FtsZ family, C-terminal domain FY406_RS00970 PF00091 Tubulin/FtsZ family, GTPase domain FY406_RS00975 PF11983 Membrane-attachment and polymerisation-promoting switch FY406_RS00975 PF02491 SHS2 domain inserted in FTSA FY406_RS00980 PF08478 POTRA domain, FtsQ-type FY406_RS00985 PF03033 Glycosyltransferase family 28 N-terminal domain FY406_RS00985 PF04101 Glycosyltransferase family 28 C-terminal domain FY406_RS00990 PF08245 Mur ligase middle domain FY406_RS00990 PF02875 Mur ligase family, glutamate ligase domain FY406_RS01000 PF01381 Helix-turn-helix FY406_RS01010 PF00817 impB/mucB/samB family FY406_RS01010 PF11799 impB/mucB/samB family C-terminal domain FY406_RS01010 PF11798 IMS family HHH motif FY406_RS01015 PF02901 Pyruvate formate lyase-like FY406_RS01015 PF01228 Glycine radical FY406_RS01025 PF00144 Beta-lactamase FY406_RS01035 PF00230 Major intrinsic protein FY406_RS01040 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FY406_RS01040 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY406_RS01040 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal FY406_RS01045 PF01458 Uncharacterized protein family (UPF0051) FY406_RS01085 PF01719 Plasmid replication protein FY406_RS01095 PF14659 Phage integrase, N-terminal SAM-like domain FY406_RS01095 PF00589 Phage integrase family FY406_RS01100 PF02575 YbaB/EbfC DNA-binding family FY406_RS01110 PF08279 HTH domain FY406_RS01110 PF04394 Protein of unknown function, DUF536 FY406_RS01125 PF01661 Macro domain FY406_RS01135 PF03591 AzlC protein FY406_RS01140 PF02502 Ribose/Galactose Isomerase FY406_RS01145 PF00834 Ribulose-phosphate 3 epimerase family FY406_RS01155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FY406_RS01155 PF02378 Phosphotransferase system, EIIC FY406_RS01155 PF00367 phosphotransferase system, EIIB FY406_RS01165 PF00814 Glycoprotease family FY406_RS01170 PF00583 Acetyltransferase (GNAT) family FY406_RS01175 PF00814 Glycoprotease family FY406_RS01185 PF11066 Protein of unknown function (DUF2867) FY406_RS01185 PF13460 NAD(P)H-binding FY406_RS01190 PF00248 Aldo/keto reductase family FY406_RS01195 PF07288 Protein of unknown function (DUF1447) FY406_RS01200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY406_RS01200 PF17770 Ribonuclease J C-terminal domain FY406_RS01200 PF00753 Metallo-beta-lactamase superfamily FY406_RS01205 PF01476 LysM domain FY406_RS01205 PF05257 CHAP domain FY406_RS01210 PF16363 GDP-mannose 4,6 dehydratase FY406_RS01215 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FY406_RS01215 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FY406_RS01220 PF00288 GHMP kinases N terminal domain FY406_RS01220 PF10509 Galactokinase galactose-binding signature FY406_RS01220 PF08544 GHMP kinases C terminal FY406_RS01225 PF00356 Bacterial regulatory proteins, lacI family FY406_RS01230 PF00128 Alpha amylase, catalytic domain FY406_RS01235 PF03459 TOBE domain FY406_RS01235 PF17912 MalK OB fold domain FY406_RS01235 PF00005 ABC transporter FY406_RS01240 PF00128 Alpha amylase, catalytic domain FY406_RS01245 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS01250 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS01255 PF01547 Bacterial extracellular solute-binding protein FY406_RS01260 PF16874 Glycosyl hydrolase family 36 C-terminal domain FY406_RS01260 PF16875 Glycosyl hydrolase family 36 N-terminal domain FY406_RS01265 PF12833 Helix-turn-helix domain FY406_RS01265 PF02311 AraC-like ligand binding domain FY406_RS01275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY406_RS01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS01280 PF00310 Glutamine amidotransferases class-II FY406_RS01280 PF04898 Glutamate synthase central domain FY406_RS01280 PF01645 Conserved region in glutamate synthase FY406_RS01280 PF01493 GXGXG motif FY406_RS01285 PF00120 Glutamine synthetase, catalytic domain FY406_RS01285 PF03951 Glutamine synthetase, beta-Grasp domain FY406_RS01290 PF13411 MerR HTH family regulatory protein FY406_RS01300 PF00162 Phosphoglycerate kinase FY406_RS01305 PF00248 Aldo/keto reductase family FY406_RS01315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY406_RS01315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY406_RS01320 PF00679 Elongation factor G C-terminus FY406_RS01320 PF14492 Elongation Factor G, domain II FY406_RS01320 PF03144 Elongation factor Tu domain 2 FY406_RS01320 PF00009 Elongation factor Tu GTP binding domain FY406_RS01320 PF03764 Elongation factor G, domain IV FY406_RS01325 PF00177 Ribosomal protein S7p/S5e FY406_RS01330 PF00164 Ribosomal protein S12/S23 FY406_RS01345 PF09182 Bacterial purine repressor, N-terminal FY406_RS01345 PF00156 Phosphoribosyl transferase domain FY406_RS01350 PF01966 HD domain FY406_RS01350 PF01336 OB-fold nucleic acid binding domain FY406_RS01355 PF02646 RmuC family FY406_RS01360 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain FY406_RS01360 PF04263 Thiamin pyrophosphokinase, catalytic domain FY406_RS01365 PF00834 Ribulose-phosphate 3 epimerase family FY406_RS01370 PF16745 RsgA N-terminal domain FY406_RS01370 PF03193 RsgA GTPase FY406_RS01390 PF01381 Helix-turn-helix FY406_RS01405 PF00398 Ribosomal RNA adenine dimethylase FY406_RS01420 PF13331 Domain of unknown function (DUF4093) FY406_RS01425 PF01026 TatD related DNase FY406_RS01435 PF01813 ATP synthase subunit D FY406_RS01440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY406_RS01440 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY406_RS01445 PF16886 ATPsynthase alpha/beta subunit N-term extension FY406_RS01445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY406_RS01445 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY406_RS01450 PF01990 ATP synthase (F/14-kDa) subunit FY406_RS01465 PF00137 ATP synthase subunit C FY406_RS01470 PF01496 V-type ATPase 116kDa subunit family FY406_RS01485 PF00468 Ribosomal protein L34 FY406_RS01495 PF02096 60Kd inner membrane protein FY406_RS01500 PF00825 Ribonuclease P FY406_RS01505 PF00206 Lyase FY406_RS01505 PF14698 Argininosuccinate lyase C-terminal FY406_RS01510 PF00764 Arginosuccinate synthase FY406_RS01525 PF02829 3H domain FY406_RS01525 PF08279 HTH domain FY406_RS01530 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY406_RS01535 PF01987 Mitochondrial biogenesis AIM24 FY406_RS01540 PF00484 Carbonic anhydrase FY406_RS01545 PF18073 Rubredoxin metal binding domain FY406_RS01555 PF00692 dUTPase FY406_RS01560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY406_RS01560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY406_RS01565 PF00483 Nucleotidyl transferase FY406_RS01570 PF01694 Rhomboid family FY406_RS01575 PF01812 5-formyltetrahydrofolate cyclo-ligase family FY406_RS01580 PF07687 Peptidase dimerisation domain FY406_RS01580 PF01546 Peptidase family M20/M25/M40 FY406_RS01585 PF00132 Bacterial transferase hexapeptide (six repeats) FY406_RS01585 PF14602 Hexapeptide repeat of succinyl-transferase FY406_RS01585 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY406_RS01600 PF03829 PTS system glucitol/sorbitol-specific IIA component FY406_RS01605 PF03612 Sorbitol phosphotransferase enzyme II N-terminus FY406_RS01605 PF07663 Sorbitol phosphotransferase enzyme II C-terminus FY406_RS01610 PF03608 PTS system enzyme II sorbitol-specific factor FY406_RS01620 PF05043 Mga helix-turn-helix domain FY406_RS01620 PF08279 HTH domain FY406_RS01620 PF00874 PRD domain FY406_RS01620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS01625 PF00106 short chain dehydrogenase FY406_RS01630 PF00342 Phosphoglucose isomerase FY406_RS01645 PF14437 MafB19-like deaminase FY406_RS01650 PF12706 Beta-lactamase superfamily domain FY406_RS01660 PF01702 Queuine tRNA-ribosyltransferase FY406_RS01665 PF13380 CoA binding domain FY406_RS01675 PF00476 DNA polymerase family A FY406_RS01675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY406_RS01675 PF01367 5'-3' exonuclease, C-terminal SAM fold FY406_RS01705 PF00106 short chain dehydrogenase FY406_RS01710 PF01979 Amidohydrolase family FY406_RS01715 PF00834 Ribulose-phosphate 3 epimerase family FY406_RS01720 PF02378 Phosphotransferase system, EIIC FY406_RS01720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS01725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS01730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS01745 PF04199 Putative cyclase FY406_RS01750 PF00375 Sodium:dicarboxylate symporter family FY406_RS01760 PF07690 Major Facilitator Superfamily FY406_RS01770 PF00456 Transketolase, thiamine diphosphate binding domain FY406_RS01770 PF02780 Transketolase, C-terminal domain FY406_RS01770 PF02779 Transketolase, pyrimidine binding domain FY406_RS01795 PF00664 ABC transporter transmembrane region FY406_RS01795 PF00005 ABC transporter FY406_RS01795 PF03412 Peptidase C39 family FY406_RS01830 PF00596 Class II Aldolase and Adducin N-terminal domain FY406_RS01835 PF01261 Xylose isomerase-like TIM barrel FY406_RS01840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY406_RS01845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS01850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS01855 PF03611 PTS system sugar-specific permease component FY406_RS01860 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase FY406_RS01860 PF09364 XFP N-terminal domain FY406_RS01860 PF09363 XFP C-terminal domain FY406_RS01865 PF00107 Zinc-binding dehydrogenase FY406_RS01865 PF08240 Alcohol dehydrogenase GroES-like domain FY406_RS01870 PF03611 PTS system sugar-specific permease component FY406_RS01875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS01885 PF05524 PEP-utilising enzyme, N-terminal FY406_RS01885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS01885 PF00381 PTS HPr component phosphorylation site FY406_RS01885 PF00391 PEP-utilising enzyme, mobile domain FY406_RS01885 PF02896 PEP-utilising enzyme, TIM barrel domain FY406_RS01900 PF00709 Adenylosuccinate synthetase FY406_RS01905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY406_RS01905 PF04262 Glutamate-cysteine ligase FY406_RS01905 PF18419 ATP-grasp-like domain FY406_RS01910 PF00696 Amino acid kinase family FY406_RS01915 PF04371 Porphyromonas-type peptidyl-arginine deiminase FY406_RS01920 PF13520 Amino acid permease FY406_RS01925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY406_RS01925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY406_RS01930 PF00196 Bacterial regulatory proteins, luxR family FY406_RS01940 PF01430 Hsp33 protein FY406_RS01945 PF01207 Dihydrouridine synthase (Dus) FY406_RS01950 PF02435 Levansucrase/Invertase FY406_RS01955 PF10431 C-terminal, D2-small domain, of ClpB protein FY406_RS01955 PF00004 ATPase family associated with various cellular activities (AAA) FY406_RS01955 PF07724 AAA domain (Cdc48 subfamily) FY406_RS01955 PF17871 AAA lid domain FY406_RS01955 PF02861 Clp amino terminal domain, pathogenicity island component FY406_RS01960 PF05848 CtsR N-terminal HTH domain FY406_RS01960 PF17727 CtsR C-terminal dimerization domain FY406_RS01965 PF00889 Elongation factor TS FY406_RS01970 PF00318 Ribosomal protein S2 FY406_RS01980 PF17676 LD-carboxypeptidase C-terminal domain FY406_RS01980 PF02016 LD-carboxypeptidase N-terminal domain FY406_RS01985 PF00581 Rhodanese-like domain FY406_RS01990 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS01990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS01995 PF00581 Rhodanese-like domain FY406_RS02000 PF02583 Metal-sensitive transcriptional repressor FY406_RS02010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY406_RS02010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY406_RS02015 PF02595 Glycerate kinase family FY406_RS02020 PF00701 Dihydrodipicolinate synthetase family FY406_RS02025 PF13378 Enolase C-terminal domain-like FY406_RS02030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY406_RS02030 PF13378 Enolase C-terminal domain-like FY406_RS02035 PF13378 Enolase C-terminal domain-like FY406_RS02045 PF17853 GGDEF-like domain FY406_RS02045 PF13556 PucR C-terminal helix-turn-helix domain FY406_RS02045 PF05651 Putative sugar diacid recognition FY406_RS02050 PF00248 Aldo/keto reductase family FY406_RS02055 PF05649 Peptidase family M13 FY406_RS02055 PF01431 Peptidase family M13 FY406_RS02060 PF00005 ABC transporter FY406_RS02080 PF00005 ABC transporter FY406_RS02080 PF13732 Domain of unknown function (DUF4162) FY406_RS02095 PF00128 Alpha amylase, catalytic domain FY406_RS02095 PF16657 Maltogenic Amylase, C-terminal domain FY406_RS02100 PF02378 Phosphotransferase system, EIIC FY406_RS02100 PF00367 phosphotransferase system, EIIB FY406_RS02105 PF07702 UTRA domain FY406_RS02105 PF00392 Bacterial regulatory proteins, gntR family FY406_RS02110 PF00746 LPXTG cell wall anchor motif FY406_RS02110 PF13199 Glycosyl hydrolase family 66 FY406_RS02120 PF02580 D-Tyr-tRNA(Tyr) deacylase FY406_RS02125 PF02824 TGS domain FY406_RS02125 PF04607 Region found in RelA / SpoT proteins FY406_RS02125 PF13291 ACT domain FY406_RS02130 PF03372 Endonuclease/Exonuclease/phosphatase family FY406_RS02135 PF00367 phosphotransferase system, EIIB FY406_RS02135 PF02378 Phosphotransferase system, EIIC FY406_RS02135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FY406_RS02145 PF00356 Bacterial regulatory proteins, lacI family FY406_RS02145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY406_RS02150 PF04452 RNA methyltransferase FY406_RS02170 PF12002 MgsA AAA+ ATPase C terminal FY406_RS02170 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY406_RS02170 PF16193 AAA C-terminal domain FY406_RS02205 PF13396 Phospholipase_D-nuclease N-terminal FY406_RS02210 PF00005 ABC transporter FY406_RS02210 PF13732 Domain of unknown function (DUF4162) FY406_RS02225 PF16363 GDP-mannose 4,6 dehydratase FY406_RS02235 PF00535 Glycosyl transferase family 2 FY406_RS02240 PF05737 Collagen binding domain FY406_RS02240 PF17802 Prealbumin-like fold domain FY406_RS02240 PF05738 Cna protein B-type domain FY406_RS02245 PF05737 Collagen binding domain FY406_RS02245 PF17961 Bacterial Ig domain FY406_RS02245 PF01476 LysM domain FY406_RS02250 PF17961 Bacterial Ig domain FY406_RS02250 PF05737 Collagen binding domain FY406_RS02250 PF01476 LysM domain FY406_RS02255 PF02535 ZIP Zinc transporter FY406_RS02260 PF03883 Peroxide stress protein YaaA FY406_RS02275 PF03477 ATP cone domain FY406_RS02275 PF13597 Anaerobic ribonucleoside-triphosphate reductase FY406_RS02285 PF06949 Protein of unknown function (DUF1292) FY406_RS02290 PF03652 Holliday junction resolvase FY406_RS02295 PF06135 IreB regulatory phosphoprotein FY406_RS02315 PF03960 ArsC family FY406_RS02320 PF00154 recA bacterial DNA recombination protein FY406_RS02325 PF02464 Competence-damaged protein FY406_RS02325 PF18146 Damage-inducible protein CinA KH domain FY406_RS02325 PF00994 Probable molybdopterin binding domain FY406_RS02330 PF13673 Acetyltransferase (GNAT) domain FY406_RS02330 PF13302 Acetyltransferase (GNAT) domain FY406_RS02330 PF00958 GMP synthase C terminal domain FY406_RS02330 PF00117 Glutamine amidotransferase class-I FY406_RS02330 PF03352 Methyladenine glycosylase FY406_RS02335 PF07499 RuvA, C-terminal domain FY406_RS02335 PF01330 RuvA N terminal domain FY406_RS02340 PF08676 MutL C terminal dimerisation domain FY406_RS02340 PF01119 DNA mismatch repair protein, C-terminal domain FY406_RS02345 PF05192 MutS domain III FY406_RS02345 PF05188 MutS domain II FY406_RS02345 PF01624 MutS domain I FY406_RS02345 PF05190 MutS family domain IV FY406_RS02345 PF00488 MutS domain V FY406_RS02355 PF02863 Arginine repressor, C-terminal domain FY406_RS02355 PF01316 Arginine repressor, DNA binding domain FY406_RS02360 PF00155 Aminotransferase class I and II FY406_RS02365 PF13520 Amino acid permease FY406_RS02370 PF00696 Amino acid kinase family FY406_RS02375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY406_RS02375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY406_RS02395 PF02863 Arginine repressor, C-terminal domain FY406_RS02395 PF01316 Arginine repressor, DNA binding domain FY406_RS02400 PF03485 Arginyl tRNA synthetase N terminal domain FY406_RS02400 PF05746 DALR anticodon binding domain FY406_RS02400 PF00750 tRNA synthetases class I (R) FY406_RS02405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FY406_RS02405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FY406_RS02410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FY406_RS02410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FY406_RS02415 PF00152 tRNA synthetases class II (D, K and N) FY406_RS02415 PF01336 OB-fold nucleic acid binding domain FY406_RS02415 PF02938 GAD domain FY406_RS02420 PF03129 Anticodon binding domain FY406_RS02420 PF13393 Histidyl-tRNA synthetase FY406_RS02425 PF13520 Amino acid permease FY406_RS02430 PF01717 Cobalamin-independent synthase, Catalytic domain FY406_RS02435 PF01783 Ribosomal L32p protein family FY406_RS02440 PF00471 Ribosomal protein L33 FY406_RS02485 PF00190 Cupin FY406_RS02490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS02500 PF07690 Major Facilitator Superfamily FY406_RS02515 PF00106 short chain dehydrogenase FY406_RS02530 PF01022 Bacterial regulatory protein, arsR family FY406_RS02535 PF03773 Predicted permease FY406_RS02550 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase FY406_RS02555 PF13350 Tyrosine phosphatase family FY406_RS02580 PF16193 AAA C-terminal domain FY406_RS02580 PF00004 ATPase family associated with various cellular activities (AAA) FY406_RS02580 PF12002 MgsA AAA+ ATPase C terminal FY406_RS02585 PF00571 CBS domain FY406_RS02585 PF00005 ABC transporter FY406_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS02595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY406_RS02600 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS02605 PF02245 Methylpurine-DNA glycosylase (MPG) FY406_RS02610 PF00171 Aldehyde dehydrogenase family FY406_RS02615 PF00689 Cation transporting ATPase, C-terminus FY406_RS02615 PF00690 Cation transporter/ATPase, N-terminus FY406_RS02620 PF00920 Dehydratase family FY406_RS02625 PF01883 Iron-sulfur cluster assembly protein FY406_RS02650 PF00163 Ribosomal protein S4/S9 N-terminal domain FY406_RS02650 PF01479 S4 domain FY406_RS02660 PF00772 DnaB-like helicase N terminal domain FY406_RS02660 PF03796 DnaB-like helicase C terminal domain FY406_RS02665 PF01281 Ribosomal protein L9, N-terminal domain FY406_RS02665 PF03948 Ribosomal protein L9, C-terminal domain FY406_RS02670 PF02272 DHHA1 domain FY406_RS02670 PF01368 DHH family FY406_RS02675 PF01134 Glucose inhibited division protein A FY406_RS02675 PF13932 GidA associated domain FY406_RS02690 PF06737 Transglycosylase-like domain FY406_RS02695 PF08239 Bacterial SH3 domain FY406_RS02695 PF00877 NlpC/P60 family FY406_RS02695 PF01476 LysM domain FY406_RS02700 PF02361 Cobalt transport protein FY406_RS02705 PF00005 ABC transporter FY406_RS02710 PF00005 ABC transporter FY406_RS02715 PF01066 CDP-alcohol phosphatidyltransferase FY406_RS02725 PF05193 Peptidase M16 inactive domain FY406_RS02725 PF00675 Insulinase (Peptidase family M16) FY406_RS02730 PF00675 Insulinase (Peptidase family M16) FY406_RS02730 PF05193 Peptidase M16 inactive domain FY406_RS02740 PF02463 RecF/RecN/SMC N terminal domain FY406_RS02745 PF00478 IMP dehydrogenase / GMP reductase domain FY406_RS02745 PF00571 CBS domain FY406_RS02750 PF00579 tRNA synthetases class I (W and Y) FY406_RS02755 PF12848 ABC transporter FY406_RS02755 PF00005 ABC transporter FY406_RS02790 PF02590 Predicted SPOUT methyltransferase FY406_RS02795 PF13180 PDZ domain FY406_RS02800 PF02195 ParB-like nuclease domain FY406_RS02800 PF17762 HTH domain found in ParB protein FY406_RS02805 PF08299 Bacterial dnaA protein helix-turn-helix FY406_RS02805 PF00308 Bacterial dnaA protein FY406_RS02810 PF02767 DNA polymerase III beta subunit, central domain FY406_RS02810 PF02768 DNA polymerase III beta subunit, C-terminal domain FY406_RS02810 PF00712 DNA polymerase III beta subunit, N-terminal domain FY406_RS02825 PF01381 Helix-turn-helix FY406_RS02830 PF01926 50S ribosome-binding GTPase FY406_RS02830 PF06071 Protein of unknown function (DUF933) FY406_RS02835 PF01195 Peptidyl-tRNA hydrolase FY406_RS02840 PF17757 UvrB interaction domain FY406_RS02840 PF03461 TRCF domain FY406_RS02840 PF00271 Helicase conserved C-terminal domain FY406_RS02840 PF00270 DEAD/DEAH box helicase FY406_RS02840 PF02559 CarD-like/TRCF domain FY406_RS02845 PF01479 S4 domain FY406_RS02865 PF01171 PP-loop family FY406_RS02870 PF00156 Phosphoribosyl transferase domain FY406_RS02875 PF01434 Peptidase family M41 FY406_RS02875 PF00004 ATPase family associated with various cellular activities (AAA) FY406_RS02875 PF06480 FtsH Extracellular FY406_RS02875 PF17862 AAA+ lid domain FY406_RS02885 PF13520 Amino acid permease FY406_RS02995 PF04085 rod shape-determining protein MreC FY406_RS03005 PF05257 CHAP domain FY406_RS03005 PF01476 LysM domain FY406_RS03010 PF14572 Phosphoribosyl synthetase-associated domain FY406_RS03010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY406_RS03015 PF00155 Aminotransferase class I and II FY406_RS03020 PF02565 Recombination protein O C terminal FY406_RS03020 PF11967 Recombination protein O N terminal FY406_RS03025 PF02504 Fatty acid synthesis protein FY406_RS03030 PF00550 Phosphopantetheine attachment site FY406_RS03035 PF01259 SAICAR synthetase FY406_RS03040 PF02769 AIR synthase related protein, C-terminal domain FY406_RS03040 PF00586 AIR synthase related protein, N-terminal domain FY406_RS03040 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY406_RS03045 PF13537 Glutamine amidotransferase domain FY406_RS03045 PF00156 Phosphoribosyl transferase domain FY406_RS03050 PF00586 AIR synthase related protein, N-terminal domain FY406_RS03050 PF02769 AIR synthase related protein, C-terminal domain FY406_RS03055 PF00551 Formyl transferase FY406_RS03060 PF02142 MGS-like domain FY406_RS03060 PF01808 AICARFT/IMPCHase bienzyme FY406_RS03070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY406_RS03070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY406_RS03075 PF01566 Natural resistance-associated macrophage protein FY406_RS03080 PF02682 Carboxyltransferase domain, subdomain C and D FY406_RS03085 PF02626 Carboxyltransferase domain, subdomain A and B FY406_RS03090 PF02785 Biotin carboxylase C-terminal domain FY406_RS03090 PF00289 Biotin carboxylase, N-terminal domain FY406_RS03090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY406_RS03095 PF03746 LamB/YcsF family FY406_RS03130 PF02843 Phosphoribosylglycinamide synthetase, C domain FY406_RS03130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY406_RS03130 PF02844 Phosphoribosylglycinamide synthetase, N domain FY406_RS03135 PF00731 AIR carboxylase FY406_RS03140 PF02222 ATP-grasp domain FY406_RS03140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY406_RS03140 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY406_RS03150 PF01177 Asp/Glu/Hydantoin racemase FY406_RS03170 PF10397 Adenylosuccinate lyase C-terminus FY406_RS03170 PF00206 Lyase FY406_RS03180 PF05491 RuvB C-terminal winged helix domain FY406_RS03180 PF17864 RuvB AAA lid domain FY406_RS03180 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY406_RS03185 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY406_RS03195 PF01757 Acyltransferase family FY406_RS03205 PF14821 Threonine synthase N terminus FY406_RS03205 PF00291 Pyridoxal-phosphate dependent enzyme FY406_RS03210 PF01554 MatE FY406_RS03215 PF00338 Ribosomal protein S10p/S20e FY406_RS03225 PF00297 Ribosomal protein L3 FY406_RS03230 PF00573 Ribosomal protein L4/L1 family FY406_RS03235 PF00276 Ribosomal protein L23 FY406_RS03240 PF03947 Ribosomal Proteins L2, C-terminal domain FY406_RS03240 PF00181 Ribosomal Proteins L2, RNA binding domain FY406_RS03245 PF00203 Ribosomal protein S19 FY406_RS03250 PF00237 Ribosomal protein L22p/L17e FY406_RS03255 PF07650 KH domain FY406_RS03255 PF00189 Ribosomal protein S3, C-terminal domain FY406_RS03260 PF00252 Ribosomal protein L16p/L10e FY406_RS03265 PF00831 Ribosomal L29 protein FY406_RS03270 PF00366 Ribosomal protein S17 FY406_RS03275 PF00238 Ribosomal protein L14p/L23e FY406_RS03280 PF00467 KOW motif FY406_RS03280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY406_RS03285 PF00673 ribosomal L5P family C-terminus FY406_RS03285 PF00281 Ribosomal protein L5 FY406_RS03290 PF00253 Ribosomal protein S14p/S29e FY406_RS03295 PF00410 Ribosomal protein S8 FY406_RS03305 PF00347 Ribosomal protein L6 FY406_RS03310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY406_RS03315 PF03719 Ribosomal protein S5, C-terminal domain FY406_RS03315 PF00333 Ribosomal protein S5, N-terminal domain FY406_RS03320 PF00327 Ribosomal protein L30p/L7e FY406_RS03325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY406_RS03330 PF00344 SecY translocase FY406_RS03340 PF01176 Translation initiation factor 1A / IF-1 FY406_RS03345 PF00444 Ribosomal protein L36 FY406_RS03350 PF00416 Ribosomal protein S13/S18 FY406_RS03355 PF00411 Ribosomal protein S11 FY406_RS03360 PF01000 RNA polymerase Rpb3/RpoA insert domain FY406_RS03360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY406_RS03360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY406_RS03365 PF01196 Ribosomal protein L17 FY406_RS03455 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY406_RS03455 PF11490 DNA polymerase III polC-type N-terminus II FY406_RS03455 PF02811 PHP domain FY406_RS03455 PF14480 DNA polymerase III polC-type N-terminus I FY406_RS03455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY406_RS03455 PF00929 Exonuclease FY406_RS03455 PF14579 Helix-hairpin-helix motif FY406_RS03460 PF01047 MarR family FY406_RS03475 PF00676 Dehydrogenase E1 component FY406_RS03480 PF00364 Biotin-requiring enzyme FY406_RS03480 PF02779 Transketolase, pyrimidine binding domain FY406_RS03480 PF02780 Transketolase, C-terminal domain FY406_RS03485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY406_RS03485 PF00364 Biotin-requiring enzyme FY406_RS03485 PF02817 e3 binding domain FY406_RS03490 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS03490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS03495 PF10437 Bacterial lipoate protein ligase C-terminus FY406_RS03495 PF03099 Biotin/lipoate A/B protein ligase family FY406_RS03500 PF07687 Peptidase dimerisation domain FY406_RS03500 PF01546 Peptidase family M20/M25/M40 FY406_RS03510 PF01327 Polypeptide deformylase FY406_RS03515 PF00027 Cyclic nucleotide-binding domain FY406_RS03525 PF00171 Aldehyde dehydrogenase family FY406_RS03525 PF00465 Iron-containing alcohol dehydrogenase FY406_RS03530 PF00312 Ribosomal protein S15 FY406_RS03540 PF07690 Major Facilitator Superfamily FY406_RS03555 PF01138 3' exoribonuclease family, domain 1 FY406_RS03555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY406_RS03555 PF00013 KH domain FY406_RS03555 PF03725 3' exoribonuclease family, domain 2 FY406_RS03555 PF00575 S1 RNA binding domain FY406_RS03565 PF00132 Bacterial transferase hexapeptide (six repeats) FY406_RS03570 PF09190 DALR domain FY406_RS03570 PF01406 tRNA synthetases class I (C) catalytic domain FY406_RS03575 PF00636 Ribonuclease III domain FY406_RS03595 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY406_RS03595 PF00588 SpoU rRNA Methylase family FY406_RS03600 PF02645 Uncharacterised protein, DegV family COG1307 FY406_RS03615 PF01381 Helix-turn-helix FY406_RS03620 PF00572 Ribosomal protein L13 FY406_RS03625 PF00380 Ribosomal protein S9/S16 FY406_RS03635 PF00989 PAS fold FY406_RS03635 PF16736 Single Cache-like FY406_RS03635 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS03645 PF02378 Phosphotransferase system, EIIC FY406_RS03645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS03645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS03650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS03655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS03655 PF02378 Phosphotransferase system, EIIC FY406_RS03655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS03660 PF09261 Alpha mannosidase middle domain FY406_RS03660 PF01074 Glycosyl hydrolases family 38 N-terminal domain FY406_RS03660 PF07748 Glycosyl hydrolases family 38 C-terminal domain FY406_RS03665 PF01418 Helix-turn-helix domain, rpiR family FY406_RS03665 PF01380 SIS domain FY406_RS03670 PF02378 Phosphotransferase system, EIIC FY406_RS03670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FY406_RS03670 PF00367 phosphotransferase system, EIIB FY406_RS03675 PF00232 Glycosyl hydrolase family 1 FY406_RS03680 PF03358 NADPH-dependent FMN reductase FY406_RS03680 PF00890 FAD binding domain FY406_RS03680 PF04205 FMN-binding domain FY406_RS03685 PF00890 FAD binding domain FY406_RS03685 PF04205 FMN-binding domain FY406_RS03685 PF03358 NADPH-dependent FMN reductase FY406_RS03690 PF00288 GHMP kinases N terminal domain FY406_RS03690 PF10509 Galactokinase galactose-binding signature FY406_RS03690 PF08544 GHMP kinases C terminal FY406_RS03715 PF05167 Uncharacterised ACR (DUF711) FY406_RS03725 PF02557 D-alanyl-D-alanine carboxypeptidase FY406_RS03730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FY406_RS03730 PF10135 Rod binding protein FY406_RS03740 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FY406_RS03740 PF01628 HrcA protein C terminal domain FY406_RS03745 PF01025 GrpE FY406_RS03750 PF00012 Hsp70 protein FY406_RS03755 PF00226 DnaJ domain FY406_RS03755 PF00684 DnaJ central domain FY406_RS03755 PF01556 DnaJ C terminal domain FY406_RS03760 PF01416 tRNA pseudouridine synthase FY406_RS03765 PF02581 Thiamine monophosphate synthase FY406_RS03765 PF08543 Phosphomethylpyrimidine kinase FY406_RS03770 PF07155 ECF-type riboflavin transporter, S component FY406_RS03775 PF04260 Protein of unknown function (DUF436) FY406_RS03780 PF00924 Mechanosensitive ion channel FY406_RS03790 PF05697 Bacterial trigger factor protein (TF) FY406_RS03790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY406_RS03790 PF05698 Bacterial trigger factor protein (TF) C-terminus FY406_RS03795 PF13419 Haloacid dehalogenase-like hydrolase FY406_RS03800 PF05066 HB1, ASXL, restriction endonuclease HTH domain FY406_RS03805 PF06418 CTP synthase N-terminus FY406_RS03805 PF00117 Glutamine amidotransferase class-I FY406_RS03820 PF01116 Fructose-bisphosphate aldolase class-II FY406_RS03830 PF00830 Ribosomal L28 family FY406_RS03835 PF03780 Asp23 family, cell envelope-related function FY406_RS03840 PF02734 DAK2 domain FY406_RS03840 PF13684 Dihydroxyacetone kinase family FY406_RS03845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY406_RS03845 PF00205 Thiamine pyrophosphate enzyme, central domain FY406_RS03845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY406_RS03850 PF10369 Small subunit of acetolactate synthase FY406_RS03850 PF01842 ACT domain FY406_RS03855 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY406_RS03855 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY406_RS03860 PF00291 Pyridoxal-phosphate dependent enzyme FY406_RS03860 PF00585 C-terminal regulatory domain of Threonine dehydratase FY406_RS03865 PF01145 SPFH domain / Band 7 family FY406_RS03870 PF00440 Bacterial regulatory proteins, tetR family FY406_RS03880 PF00005 ABC transporter FY406_RS03890 PF00005 ABC transporter FY406_RS03895 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS03900 PF00005 ABC transporter FY406_RS03915 PF13649 Methyltransferase domain FY406_RS03930 PF00202 Aminotransferase class-III FY406_RS03950 PF02673 Bacitracin resistance protein BacA FY406_RS03955 PF05389 Negative regulator of genetic competence (MecA) FY406_RS03960 PF00953 Glycosyl transferase family 4 FY406_RS03965 PF00005 ABC transporter FY406_RS03970 PF01458 Uncharacterized protein family (UPF0051) FY406_RS03975 PF00266 Aminotransferase class-V FY406_RS03980 PF01592 NifU-like N terminal domain FY406_RS03985 PF01458 Uncharacterized protein family (UPF0051) FY406_RS03990 PF03972 MmgE/PrpD family FY406_RS03995 PF04303 PrpF protein FY406_RS04000 PF03600 Citrate transporter FY406_RS04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS04005 PF03466 LysR substrate binding domain FY406_RS04015 PF00768 D-alanyl-D-alanine carboxypeptidase FY406_RS04015 PF07943 Penicillin-binding protein 5, C-terminal domain FY406_RS04020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY406_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS04030 PF12911 N-terminal TM domain of oligopeptide transport permease C FY406_RS04030 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS04035 PF00005 ABC transporter FY406_RS04035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY406_RS04040 PF00005 ABC transporter FY406_RS04040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY406_RS04045 PF01081 KDPG and KHG aldolase FY406_RS04080 PF00288 GHMP kinases N terminal domain FY406_RS04080 PF08544 GHMP kinases C terminal FY406_RS04085 PF01047 MarR family FY406_RS04090 PF00005 ABC transporter FY406_RS04095 PF00950 ABC 3 transport family FY406_RS04100 PF00579 tRNA synthetases class I (W and Y) FY406_RS04100 PF01479 S4 domain FY406_RS04105 PF00905 Penicillin binding protein transpeptidase domain FY406_RS04105 PF00912 Transglycosylase FY406_RS04110 PF04565 RNA polymerase Rpb2, domain 3 FY406_RS04110 PF10385 RNA polymerase beta subunit external 1 domain FY406_RS04110 PF04561 RNA polymerase Rpb2, domain 2 FY406_RS04110 PF04563 RNA polymerase beta subunit FY406_RS04110 PF04560 RNA polymerase Rpb2, domain 7 FY406_RS04110 PF00562 RNA polymerase Rpb2, domain 6 FY406_RS04115 PF00623 RNA polymerase Rpb1, domain 2 FY406_RS04115 PF04997 RNA polymerase Rpb1, domain 1 FY406_RS04115 PF05000 RNA polymerase Rpb1, domain 4 FY406_RS04115 PF04998 RNA polymerase Rpb1, domain 5 FY406_RS04115 PF04983 RNA polymerase Rpb1, domain 3 FY406_RS04130 PF00072 Response regulator receiver domain FY406_RS04130 PF00486 Transcriptional regulatory protein, C terminal FY406_RS04135 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS04135 PF00672 HAMP domain FY406_RS04140 PF00437 Type II/IV secretion system protein FY406_RS04145 PF00482 Type II secretion system (T2SS), protein F FY406_RS04150 PF07963 Prokaryotic N-terminal methylation motif FY406_RS04175 PF02384 N-6 DNA Methylase FY406_RS04180 PF00871 Acetokinase family FY406_RS04185 PF02517 CPBP intramembrane metalloprotease FY406_RS04190 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY406_RS04190 PF03807 NADP oxidoreductase coenzyme F420-dependent FY406_RS04195 PF05343 M42 glutamyl aminopeptidase FY406_RS04205 PF00085 Thioredoxin FY406_RS04210 PF14794 Domain of unknown function (DUF4479) FY406_RS04210 PF01588 Putative tRNA binding domain FY406_RS04215 PF00436 Single-strand binding protein family FY406_RS04225 PF07730 Histidine kinase FY406_RS04230 PF00196 Bacterial regulatory proteins, luxR family FY406_RS04230 PF00072 Response regulator receiver domain FY406_RS04250 PF03609 PTS system sorbose-specific iic component FY406_RS04255 PF03613 PTS system mannose/fructose/sorbose family IID component FY406_RS04265 PF00166 Chaperonin 10 Kd subunit FY406_RS04270 PF00118 TCP-1/cpn60 chaperonin family FY406_RS04280 PF01479 S4 domain FY406_RS04280 PF00849 RNA pseudouridylate synthase FY406_RS04285 PF00912 Transglycosylase FY406_RS04285 PF00905 Penicillin binding protein transpeptidase domain FY406_RS04290 PF00471 Ribosomal protein L33 FY406_RS04300 PF02357 Transcription termination factor nusG FY406_RS04300 PF00467 KOW motif FY406_RS04305 PF01734 Patatin-like phospholipase FY406_RS04310 PF00210 Ferritin-like domain FY406_RS04315 PF08264 Anticodon-binding domain of tRNA FY406_RS04315 PF00133 tRNA synthetases class I (I, L, M and V) FY406_RS04315 PF13603 Leucyl-tRNA synthetase, Domain 2 FY406_RS04315 PF09334 tRNA synthetases class I (M) FY406_RS04320 PF01381 Helix-turn-helix FY406_RS04325 PF05147 Lanthionine synthetase C-like protein FY406_RS04325 PF13575 Domain of unknown function (DUF4135) FY406_RS04330 PF00005 ABC transporter FY406_RS04345 PF00664 ABC transporter transmembrane region FY406_RS04345 PF03412 Peptidase C39 family FY406_RS04345 PF00005 ABC transporter FY406_RS04355 PF14867 Lantibiotic alpha FY406_RS04370 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS04375 PF03180 NLPA lipoprotein FY406_RS04380 PF07687 Peptidase dimerisation domain FY406_RS04380 PF01546 Peptidase family M20/M25/M40 FY406_RS04385 PF00005 ABC transporter FY406_RS04385 PF09383 NIL domain FY406_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS04395 PF00795 Carbon-nitrogen hydrolase FY406_RS04410 PF00005 ABC transporter FY406_RS04410 PF12558 ATP-binding cassette cobalt transporter FY406_RS04430 PF02527 rRNA small subunit methyltransferase G FY406_RS04435 PF04011 LemA family FY406_RS04440 PF01435 Peptidase family M48 FY406_RS04450 PF00072 Response regulator receiver domain FY406_RS04450 PF00486 Transcriptional regulatory protein, C terminal FY406_RS04455 PF03477 ATP cone domain FY406_RS04465 PF07319 Primosomal protein DnaI N-terminus FY406_RS04465 PF01695 IstB-like ATP binding protein FY406_RS04470 PF01926 50S ribosome-binding GTPase FY406_RS04470 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY406_RS04490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY406_RS04490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY406_RS04505 PF01609 Transposase DDE domain FY406_RS04505 PF13808 DDE_Tnp_1-associated FY406_RS04510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY406_RS04510 PF02403 Seryl-tRNA synthetase N-terminal domain FY406_RS04535 PF03412 Peptidase C39 family FY406_RS04535 PF00005 ABC transporter FY406_RS04535 PF00664 ABC transporter transmembrane region FY406_RS04540 PF03613 PTS system mannose/fructose/sorbose family IID component FY406_RS04545 PF03609 PTS system sorbose-specific iic component FY406_RS04550 PF03830 PTS system sorbose subfamily IIB component FY406_RS04550 PF03610 PTS system fructose IIA component FY406_RS04560 PF13538 UvrD-like helicase C-terminal domain FY406_RS04560 PF14490 Helix-hairpin-helix containing domain FY406_RS04560 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY406_RS04565 PF10502 Signal peptidase, peptidase S26 FY406_RS04570 PF01351 Ribonuclease HII FY406_RS04570 PF11858 Domain of unknown function (DUF3378) FY406_RS04585 PF00488 MutS domain V FY406_RS04585 PF01713 Smr domain FY406_RS04590 PF00085 Thioredoxin FY406_RS04600 PF14815 NUDIX domain FY406_RS04600 PF00633 Helix-hairpin-helix motif FY406_RS04600 PF00730 HhH-GPD superfamily base excision DNA repair protein FY406_RS04605 PF00881 Nitroreductase family FY406_RS04610 PF01250 Ribosomal protein S6 FY406_RS04615 PF00436 Single-strand binding protein family FY406_RS04620 PF01084 Ribosomal protein S18 FY406_RS04640 PF00005 ABC transporter FY406_RS04640 PF17760 UvrA interaction domain FY406_RS04640 PF17755 UvrA DNA-binding domain FY406_RS04650 PF01321 Creatinase/Prolidase N-terminal domain FY406_RS04650 PF00557 Metallopeptidase family M24 FY406_RS04655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY406_RS04660 PF09285 Elongation factor P, C-terminal FY406_RS04660 PF08207 Elongation factor P (EF-P) KOW-like domain FY406_RS04660 PF01132 Elongation factor P (EF-P) OB domain FY406_RS04665 PF03780 Asp23 family, cell envelope-related function FY406_RS04670 PF01029 NusB family FY406_RS04675 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY406_RS04675 PF08244 Glycosyl hydrolases family 32 C terminal FY406_RS04680 PF00356 Bacterial regulatory proteins, lacI family FY406_RS04685 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY406_RS04685 PF08244 Glycosyl hydrolases family 32 C terminal FY406_RS04690 PF02378 Phosphotransferase system, EIIC FY406_RS04690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FY406_RS04690 PF00367 phosphotransferase system, EIIB FY406_RS04695 PF00480 ROK family FY406_RS04700 PF01238 Phosphomannose isomerase type I FY406_RS04705 PF07516 SecA Wing and Scaffold domain FY406_RS04705 PF02810 SEC-C motif FY406_RS04705 PF01043 SecA preprotein cross-linking domain FY406_RS04705 PF07517 SecA DEAD-like domain FY406_RS04710 PF00793 DAHP synthetase I family FY406_RS04715 PF00793 DAHP synthetase I family FY406_RS04720 PF01648 4'-phosphopantetheinyl transferase superfamily FY406_RS04725 PF00842 Alanine racemase, C-terminal domain FY406_RS04725 PF01168 Alanine racemase, N-terminal domain FY406_RS04730 PF17191 RecG wedge domain FY406_RS04730 PF00271 Helicase conserved C-terminal domain FY406_RS04730 PF00270 DEAD/DEAH box helicase FY406_RS04740 PF00710 Asparaginase, N-terminal FY406_RS04740 PF17763 Glutaminase/Asparaginase C-terminal domain FY406_RS04750 PF00582 Universal stress protein family FY406_RS04755 PF02632 BioY family FY406_RS04760 PF00155 Aminotransferase class I and II FY406_RS04765 PF06018 CodY GAF-like domain FY406_RS04765 PF08222 CodY helix-turn-helix domain FY406_RS04770 PF00857 Isochorismatase family FY406_RS04775 PF00152 tRNA synthetases class II (D, K and N) FY406_RS04775 PF02938 GAD domain FY406_RS04775 PF01336 OB-fold nucleic acid binding domain FY406_RS04780 PF02686 Glu-tRNAGln amidotransferase C subunit FY406_RS04785 PF01425 Amidase FY406_RS04790 PF02637 GatB domain FY406_RS04790 PF02934 GatB/GatE catalytic domain FY406_RS04795 PF02324 Glycosyl hydrolase family 70 FY406_RS04795 PF01473 Putative cell wall binding repeat FY406_RS04800 PF00892 EamA-like transporter family FY406_RS04810 PF01926 50S ribosome-binding GTPase FY406_RS04815 PF01985 CRS1 / YhbY (CRM) domain FY406_RS04820 PF01467 Cytidylyltransferase-like FY406_RS04825 PF01966 HD domain FY406_RS04835 PF13649 Methyltransferase domain FY406_RS04845 PF02661 Fic/DOC family FY406_RS04845 PF13784 Fic/DOC family N-terminal FY406_RS04850 PF05636 HIGH Nucleotidyl Transferase FY406_RS04865 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FY406_RS04870 PF07739 TipAS antibiotic-recognition domain FY406_RS04870 PF13411 MerR HTH family regulatory protein FY406_RS04875 PF01327 Polypeptide deformylase FY406_RS04880 PF01709 Transcriptional regulator FY406_RS04890 PF02699 Preprotein translocase subunit FY406_RS04895 PF01609 Transposase DDE domain FY406_RS04895 PF13808 DDE_Tnp_1-associated FY406_RS04900 PF01255 Putative undecaprenyl diphosphate synthase FY406_RS04910 PF13180 PDZ domain FY406_RS04910 PF02163 Peptidase family M50 FY406_RS04915 PF03129 Anticodon binding domain FY406_RS04915 PF04073 Aminoacyl-tRNA editing domain FY406_RS04915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY406_RS04990 PF04167 Protein of unknown function (DUF402) FY406_RS04995 PF02631 RecX family FY406_RS05000 PF05958 tRNA (Uracil-5-)-methyltransferase FY406_RS05000 PF01938 TRAM domain FY406_RS05005 PF07972 NrdI Flavodoxin like FY406_RS05045 PF13302 Acetyltransferase (GNAT) domain FY406_RS05050 PF01966 HD domain FY406_RS05060 PF08264 Anticodon-binding domain of tRNA FY406_RS05060 PF00133 tRNA synthetases class I (I, L, M and V) FY406_RS05060 PF10458 Valyl tRNA synthetase tRNA binding arm FY406_RS05095 PF00440 Bacterial regulatory proteins, tetR family FY406_RS05100 PF06100 MCRA family FY406_RS05105 PF08220 DeoR-like helix-turn-helix domain FY406_RS05105 PF00455 DeoR C terminal sensor domain FY406_RS05120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS05120 PF00874 PRD domain FY406_RS05120 PF05043 Mga helix-turn-helix domain FY406_RS05120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS05120 PF08279 HTH domain FY406_RS05130 PF03611 PTS system sugar-specific permease component FY406_RS05140 PF01116 Fructose-bisphosphate aldolase class-II FY406_RS05150 PF00571 CBS domain FY406_RS05150 PF08279 HTH domain FY406_RS05155 PF03618 Kinase/pyrophosphorylase FY406_RS05160 PF02896 PEP-utilising enzyme, TIM barrel domain FY406_RS05160 PF00391 PEP-utilising enzyme, mobile domain FY406_RS05160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY406_RS05170 PF01467 Cytidylyltransferase-like FY406_RS05175 PF05362 Lon protease (S16) C-terminal proteolytic domain FY406_RS05175 PF13180 PDZ domain FY406_RS05180 PF02872 5'-nucleotidase, C-terminal domain FY406_RS05185 PF06265 Protein of unknown function (DUF1027) FY406_RS05190 PF04055 Radical SAM superfamily FY406_RS05200 PF00664 ABC transporter transmembrane region FY406_RS05200 PF00005 ABC transporter FY406_RS05205 PF00005 ABC transporter FY406_RS05205 PF00664 ABC transporter transmembrane region FY406_RS05210 PF06445 GyrI-like small molecule binding domain FY406_RS05210 PF13411 MerR HTH family regulatory protein FY406_RS05235 PF04715 Anthranilate synthase component I, N terminal region FY406_RS05235 PF00425 chorismate binding enzyme FY406_RS05240 PF00117 Glutamine amidotransferase class-I FY406_RS05245 PF00591 Glycosyl transferase family, a/b domain FY406_RS05245 PF02885 Glycosyl transferase family, helical bundle domain FY406_RS05250 PF00218 Indole-3-glycerol phosphate synthase FY406_RS05255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY406_RS05260 PF00291 Pyridoxal-phosphate dependent enzyme FY406_RS05265 PF00290 Tryptophan synthase alpha chain FY406_RS05275 PF00210 Ferritin-like domain FY406_RS05285 PF00480 ROK family FY406_RS05290 PF00581 Rhodanese-like domain FY406_RS05295 PF00679 Elongation factor G C-terminus FY406_RS05295 PF00009 Elongation factor Tu GTP binding domain FY406_RS05295 PF14492 Elongation Factor G, domain II FY406_RS05295 PF03144 Elongation factor Tu domain 2 FY406_RS05325 PF00860 Permease family FY406_RS05330 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY406_RS05335 PF13302 Acetyltransferase (GNAT) domain FY406_RS05340 PF03816 Cell envelope-related transcriptional attenuator domain FY406_RS05350 PF01230 HIT domain FY406_RS05355 PF00005 ABC transporter FY406_RS05360 PF05975 Bacterial ABC transporter protein EcsB FY406_RS05370 PF02390 Putative methyltransferase FY406_RS05380 PF01202 Shikimate kinase FY406_RS05385 PF17384 RimP C-terminal SH3 domain FY406_RS05385 PF02576 RimP N-terminal domain FY406_RS05390 PF00575 S1 RNA binding domain FY406_RS05390 PF08529 NusA N-terminal domain FY406_RS05390 PF13184 NusA-like KH domain FY406_RS05395 PF04296 Protein of unknown function (DUF448) FY406_RS05400 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FY406_RS05405 PF04760 Translation initiation factor IF-2, N-terminal region FY406_RS05405 PF11987 Translation-initiation factor 2 FY406_RS05405 PF00009 Elongation factor Tu GTP binding domain FY406_RS05410 PF02033 Ribosome-binding factor A FY406_RS05430 PF03965 Penicillinase repressor FY406_RS05435 PF00403 Heavy-metal-associated domain FY406_RS05455 PF00005 ABC transporter FY406_RS05475 PF01979 Amidohydrolase family FY406_RS05480 PF02091 Glycyl-tRNA synthetase alpha subunit FY406_RS05485 PF02092 Glycyl-tRNA synthetase beta subunit FY406_RS05490 PF05979 Bacterial protein of unknown function (DUF896) FY406_RS05500 PF00696 Amino acid kinase family FY406_RS05505 PF00171 Aldehyde dehydrogenase family FY406_RS05510 PF01795 MraW methylase family FY406_RS05515 PF04977 Septum formation initiator FY406_RS05520 PF00905 Penicillin binding protein transpeptidase domain FY406_RS05520 PF03717 Penicillin-binding Protein dimerisation domain FY406_RS05520 PF03793 PASTA domain FY406_RS05525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY406_RS05525 PF00953 Glycosyl transferase family 4 FY406_RS05530 PF00270 DEAD/DEAH box helicase FY406_RS05530 PF00271 Helicase conserved C-terminal domain FY406_RS05540 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS05545 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS05550 PF00005 ABC transporter FY406_RS05560 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS05570 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FY406_RS05570 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY406_RS05570 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY406_RS05575 PF02540 NAD synthase FY406_RS05580 PF03051 Peptidase C1-like family FY406_RS05585 PF00905 Penicillin binding protein transpeptidase domain FY406_RS05585 PF00912 Transglycosylase FY406_RS05590 PF03838 Recombination protein U FY406_RS05595 PF06908 YspA SLOG family FY406_RS05600 PF05103 DivIVA protein FY406_RS05610 PF01170 Putative RNA methylase family UPF0020 FY406_RS05610 PF02926 THUMP domain FY406_RS05615 PF18041 MapZ extracellular domain 1 FY406_RS05615 PF18708 MapZ extracellular C-terminal domain 2 FY406_RS05620 PF02664 S-Ribosylhomocysteinase (LuxS) FY406_RS05625 PF01966 HD domain FY406_RS05625 PF12072 Domain of unknown function (DUF3552) FY406_RS05625 PF00013 KH domain FY406_RS05630 PF00625 Guanylate kinase FY406_RS05635 PF01192 RNA polymerase Rpb6 FY406_RS05640 PF04851 Type III restriction enzyme, res subunit FY406_RS05640 PF17764 3′ DNA-binding domain (3′BD) FY406_RS05640 PF18074 Primosomal protein N C-terminal domain FY406_RS05640 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY406_RS05640 PF00271 Helicase conserved C-terminal domain FY406_RS05645 PF00551 Formyl transferase FY406_RS05645 PF02911 Formyl transferase, C-terminal domain FY406_RS05650 PF01189 16S rRNA methyltransferase RsmB/F FY406_RS05650 PF01029 NusB family FY406_RS05660 PF03793 PASTA domain FY406_RS05660 PF00069 Protein kinase domain FY406_RS05670 PF00672 HAMP domain FY406_RS05670 PF07730 Histidine kinase FY406_RS05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS05675 PF00072 Response regulator receiver domain FY406_RS05675 PF00196 Bacterial regulatory proteins, luxR family FY406_RS05680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY406_RS05685 PF03725 3' exoribonuclease family, domain 2 FY406_RS05685 PF01138 3' exoribonuclease family, domain 1 FY406_RS05685 PF00575 S1 RNA binding domain FY406_RS05685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY406_RS05685 PF00013 KH domain FY406_RS05690 PF00291 Pyridoxal-phosphate dependent enzyme FY406_RS05695 PF09186 Domain of unknown function (DUF1949) FY406_RS05695 PF01205 Uncharacterized protein family UPF0029 FY406_RS05700 PF00271 Helicase conserved C-terminal domain FY406_RS05700 PF04851 Type III restriction enzyme, res subunit FY406_RS05705 PF00156 Phosphoribosyl transferase domain FY406_RS05710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY406_RS05710 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY406_RS05795 PF00696 Amino acid kinase family FY406_RS05795 PF13840 ACT domain FY406_RS05800 PF13419 Haloacid dehalogenase-like hydrolase FY406_RS05805 PF00378 Enoyl-CoA hydratase/isomerase FY406_RS05810 PF01047 MarR family FY406_RS05815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY406_RS05815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY406_RS05820 PF00550 Phosphopantetheine attachment site FY406_RS05825 PF03060 Nitronate monooxygenase FY406_RS05830 PF00698 Acyl transferase domain FY406_RS05840 PF00109 Beta-ketoacyl synthase, N-terminal domain FY406_RS05840 PF02801 Beta-ketoacyl synthase, C-terminal domain FY406_RS05845 PF00364 Biotin-requiring enzyme FY406_RS05850 PF07977 FabA-like domain FY406_RS05855 PF02785 Biotin carboxylase C-terminal domain FY406_RS05855 PF00289 Biotin carboxylase, N-terminal domain FY406_RS05855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY406_RS05860 PF01039 Carboxyl transferase domain FY406_RS05865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY406_RS05870 PF04434 SWIM zinc finger FY406_RS05870 PF00271 Helicase conserved C-terminal domain FY406_RS05870 PF00176 SNF2 family N-terminal domain FY406_RS05880 PF08245 Mur ligase middle domain FY406_RS05880 PF02875 Mur ligase family, glutamate ligase domain FY406_RS05880 PF01225 Mur ligase family, catalytic domain FY406_RS05890 PF02618 YceG-like family FY406_RS05895 PF01272 Transcription elongation factor, GreA/GreB, C-term FY406_RS05895 PF03449 Transcription elongation factor, N-terminal FY406_RS05900 PF02096 60Kd inner membrane protein FY406_RS05905 PF00708 Acylphosphatase FY406_RS05910 PF00588 SpoU rRNA Methylase family FY406_RS05910 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY406_RS05920 PF01027 Inhibitor of apoptosis-promoting Bax1 FY406_RS05925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY406_RS05925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY406_RS05930 PF03672 Uncharacterised protein family (UPF0154) FY406_RS05935 PF01177 Asp/Glu/Hydantoin racemase FY406_RS05940 PF01725 Ham1 family FY406_RS05960 PF02616 Segregation and condensation protein ScpA FY406_RS05965 PF04079 Segregation and condensation complex subunit ScpB FY406_RS05970 PF00849 RNA pseudouridylate synthase FY406_RS05970 PF01479 S4 domain FY406_RS05975 PF01809 Putative membrane protein insertion efficiency factor FY406_RS05980 PF02386 Cation transport protein FY406_RS05985 PF02080 TrkA-C domain FY406_RS05985 PF02254 TrkA-N domain FY406_RS05990 PF00588 SpoU rRNA Methylase family FY406_RS06005 PF03551 Transcriptional regulator PadR-like family FY406_RS06010 PF12822 ECF transporter, substrate-specific component FY406_RS06015 PF01569 PAP2 superfamily FY406_RS06020 PF01545 Cation efflux family FY406_RS06025 PF16199 Radical_SAM C-terminal domain FY406_RS06025 PF04055 Radical SAM superfamily FY406_RS06030 PF06962 Putative rRNA methylase FY406_RS06035 PF18652 Adhesin P1 N-terminal domain FY406_RS06035 PF00746 LPXTG cell wall anchor motif FY406_RS06035 PF08363 Glucan-binding protein C FY406_RS06035 PF06696 Streptococcal surface antigen repeat FY406_RS06035 PF16364 Cell surface antigen C-terminus FY406_RS06035 PF17998 Cell surface antigen I/II C2 terminal domain FY406_RS06050 PF00005 ABC transporter FY406_RS06055 PF01594 AI-2E family transporter FY406_RS06060 PF00571 CBS domain FY406_RS06060 PF01595 Cyclin M transmembrane N-terminal domain FY406_RS06060 PF03471 Transporter associated domain FY406_RS06065 PF04055 Radical SAM superfamily FY406_RS06070 PF02833 DHHA2 domain FY406_RS06070 PF01368 DHH family FY406_RS06080 PF13280 WYL domain FY406_RS06080 PF08279 HTH domain FY406_RS06085 PF01965 DJ-1/PfpI family FY406_RS06105 PF01032 FecCD transport family FY406_RS06110 PF01032 FecCD transport family FY406_RS06115 PF01497 Periplasmic binding protein FY406_RS06120 PF00005 ABC transporter FY406_RS06125 PF02875 Mur ligase family, glutamate ligase domain FY406_RS06125 PF08245 Mur ligase middle domain FY406_RS06130 PF14667 Polysaccharide biosynthesis C-terminal domain FY406_RS06130 PF01943 Polysaccharide biosynthesis protein FY406_RS06135 PF01053 Cys/Met metabolism PLP-dependent enzyme FY406_RS06140 PF00155 Aminotransferase class I and II FY406_RS06155 PF00574 Clp protease FY406_RS06165 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) FY406_RS06170 PF13458 Periplasmic binding protein FY406_RS06175 PF02653 Branched-chain amino acid transport system / permease component FY406_RS06180 PF11862 Domain of unknown function (DUF3382) FY406_RS06180 PF02653 Branched-chain amino acid transport system / permease component FY406_RS06185 PF00005 ABC transporter FY406_RS06185 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY406_RS06190 PF00005 ABC transporter FY406_RS06200 PF00571 CBS domain FY406_RS06205 PF02223 Thymidylate kinase FY406_RS06210 PF09115 DNA polymerase III, delta subunit, C terminal FY406_RS06215 PF04468 PSP1 C-terminal conserved region FY406_RS06220 PF06156 Initiation control protein YabA FY406_RS06225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY406_RS06230 PF00909 Ammonium Transporter Family FY406_RS06235 PF00543 Nitrogen regulatory protein P-II FY406_RS06240 PF00266 Aminotransferase class-V FY406_RS06250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY406_RS06250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY406_RS06250 PF01842 ACT domain FY406_RS06255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY406_RS06255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY406_RS06260 PF03960 ArsC family FY406_RS06265 PF10576 Iron-sulfur binding domain of endonuclease III FY406_RS06265 PF00633 Helix-hairpin-helix motif FY406_RS06265 PF00730 HhH-GPD superfamily base excision DNA repair protein FY406_RS06285 PF03372 Endonuclease/Exonuclease/phosphatase family FY406_RS06290 PF01712 Deoxynucleoside kinase FY406_RS06300 PF09334 tRNA synthetases class I (M) FY406_RS06300 PF01588 Putative tRNA binding domain FY406_RS06315 PF13409 Glutathione S-transferase, N-terminal domain FY406_RS06335 PF12804 MobA-like NTP transferase domain FY406_RS06335 PF00132 Bacterial transferase hexapeptide (six repeats) FY406_RS06335 PF14602 Hexapeptide repeat of succinyl-transferase FY406_RS06340 PF00293 NUDIX domain FY406_RS06350 PF01048 Phosphorylase superfamily FY406_RS06355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY406_RS06360 PF17854 FtsK alpha domain FY406_RS06360 PF09397 Ftsk gamma domain FY406_RS06360 PF01580 FtsK/SpoIIIE family FY406_RS06365 PF00578 AhpC/TSA family FY406_RS06370 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS06370 PF13192 Thioredoxin domain FY406_RS06380 PF03946 Ribosomal protein L11, N-terminal domain FY406_RS06380 PF00298 Ribosomal protein L11, RNA binding domain FY406_RS06385 PF00687 Ribosomal protein L1p/L10e family FY406_RS06390 PF00696 Amino acid kinase family FY406_RS06395 PF01765 Ribosome recycling factor FY406_RS06400 PF17783 CvfB-like winged helix domain FY406_RS06400 PF13509 S1 domain FY406_RS06415 PF01625 Peptide methionine sulfoxide reductase FY406_RS06420 PF06855 YozE SAM-like fold FY406_RS06425 PF02562 PhoH-like protein FY406_RS06435 PF02130 Uncharacterized protein family UPF0054 FY406_RS06440 PF01219 Prokaryotic diacylglycerol kinase FY406_RS06445 PF01926 50S ribosome-binding GTPase FY406_RS06445 PF07650 KH domain FY406_RS06450 PF12697 Alpha/beta hydrolase family FY406_RS06460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY406_RS06460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY406_RS06460 PF06827 Zinc finger found in FPG and IleRS FY406_RS06465 PF01121 Dephospho-CoA kinase FY406_RS06475 PF00083 Sugar (and other) transporter FY406_RS06475 PF07690 Major Facilitator Superfamily FY406_RS06480 PF00471 Ribosomal protein L33 FY406_RS06490 PF08206 Ribonuclease B OB domain FY406_RS06490 PF00773 RNB domain FY406_RS06490 PF00575 S1 RNA binding domain FY406_RS06490 PF17876 Cold shock domain FY406_RS06495 PF01668 SmpB protein FY406_RS06500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY406_RS06505 PF00881 Nitroreductase family FY406_RS06510 PF00480 ROK family FY406_RS06515 PF00232 Glycosyl hydrolase family 1 FY406_RS06525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS06530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS06530 PF08279 HTH domain FY406_RS06530 PF05043 Mga helix-turn-helix domain FY406_RS06530 PF00874 PRD domain FY406_RS06535 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FY406_RS06545 PF02378 Phosphotransferase system, EIIC FY406_RS06570 PF01321 Creatinase/Prolidase N-terminal domain FY406_RS06570 PF00557 Metallopeptidase family M24 FY406_RS06575 PF00356 Bacterial regulatory proteins, lacI family FY406_RS06580 PF09154 Domain of unknown function (DUF1939) FY406_RS06580 PF00128 Alpha amylase, catalytic domain FY406_RS06585 PF00534 Glycosyl transferases group 1 FY406_RS06585 PF13439 Glycosyltransferase Family 4 FY406_RS06590 PF13439 Glycosyltransferase Family 4 FY406_RS06590 PF00534 Glycosyl transferases group 1 FY406_RS06600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY406_RS06600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY406_RS06600 PF03129 Anticodon binding domain FY406_RS06600 PF02824 TGS domain FY406_RS06605 PF01381 Helix-turn-helix FY406_RS06640 PF00448 SRP54-type protein, GTPase domain FY406_RS06640 PF02881 SRP54-type protein, helical bundle domain FY406_RS06645 PF07690 Major Facilitator Superfamily FY406_RS06650 PF09323 Domain of unknown function (DUF1980) FY406_RS06655 PF03773 Predicted permease FY406_RS06675 PF02525 Flavodoxin-like fold FY406_RS06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS06680 PF03466 LysR substrate binding domain FY406_RS06700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY406_RS06700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY406_RS06715 PF00027 Cyclic nucleotide-binding domain FY406_RS06715 PF00520 Ion transport protein FY406_RS06725 PF16921 Tex protein YqgF-like domain FY406_RS06725 PF09371 Tex-like protein N-terminal domain FY406_RS06725 PF17674 HHH domain FY406_RS06725 PF00575 S1 RNA binding domain FY406_RS06730 PF10263 SprT-like family FY406_RS06740 PF07475 HPr Serine kinase C-terminal domain FY406_RS06740 PF02603 HPr Serine kinase N terminus FY406_RS06745 PF01790 Prolipoprotein diacylglyceryl transferase FY406_RS06755 PF12732 YtxH-like protein FY406_RS06770 PF16325 Peptidase family U32 C-terminal domain FY406_RS06770 PF01136 Peptidase family U32 FY406_RS06780 PF02229 Transcriptional Coactivator p15 (PC4) FY406_RS06785 PF01566 Natural resistance-associated macrophage protein FY406_RS06800 PF01047 MarR family FY406_RS06815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS06820 PF01641 SelR domain FY406_RS06825 PF01625 Peptide methionine sulfoxide reductase FY406_RS06825 PF01641 SelR domain FY406_RS06830 PF01336 OB-fold nucleic acid binding domain FY406_RS06830 PF00152 tRNA synthetases class II (D, K and N) FY406_RS06845 PF00300 Histidine phosphatase superfamily (branch 1) FY406_RS06855 PF04073 Aminoacyl-tRNA editing domain FY406_RS06865 PF13457 GW (Gly-Tryp) dipeptide domain FY406_RS06865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FY406_RS06865 PF01510 N-acetylmuramoyl-L-alanine amidase FY406_RS06870 PF09515 Thiamine transporter protein (Thia_YuaJ) FY406_RS06880 PF01717 Cobalamin-independent synthase, Catalytic domain FY406_RS06895 PF00311 Phosphoenolpyruvate carboxylase FY406_RS06900 PF01098 Cell cycle protein FY406_RS06905 PF03144 Elongation factor Tu domain 2 FY406_RS06905 PF03143 Elongation factor Tu C-terminal domain FY406_RS06905 PF00009 Elongation factor Tu GTP binding domain FY406_RS06910 PF00121 Triosephosphate isomerase FY406_RS06920 PF02388 FemAB family FY406_RS06930 PF01966 HD domain FY406_RS06945 PF00701 Dihydrodipicolinate synthetase family FY406_RS06965 PF07005 Sugar-binding N-terminal domain FY406_RS06965 PF17042 Nucleotide-binding C-terminal domain FY406_RS06970 PF00465 Iron-containing alcohol dehydrogenase FY406_RS06975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY406_RS06985 PF00690 Cation transporter/ATPase, N-terminus FY406_RS06985 PF00689 Cation transporting ATPase, C-terminus FY406_RS06990 PF03009 Glycerophosphoryl diester phosphodiesterase family FY406_RS07000 PF06874 Firmicute fructose-1,6-bisphosphatase FY406_RS07005 PF08331 Domain of unknown function (DUF1730) FY406_RS07015 PF00005 ABC transporter FY406_RS07020 PF18075 FtsX extracellular domain FY406_RS07020 PF02687 FtsX-like permease family FY406_RS07025 PF00753 Metallo-beta-lactamase superfamily FY406_RS07035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY406_RS07035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY406_RS07035 PF02142 MGS-like domain FY406_RS07075 PF00005 ABC transporter FY406_RS07085 PF04851 Type III restriction enzyme, res subunit FY406_RS07085 PF13307 Helicase C-terminal domain FY406_RS07085 PF00929 Exonuclease FY406_RS07090 PF00155 Aminotransferase class I and II FY406_RS07095 PF01336 OB-fold nucleic acid binding domain FY406_RS07095 PF00152 tRNA synthetases class II (D, K and N) FY406_RS07105 PF01042 Endoribonuclease L-PSP FY406_RS07115 PF00440 Bacterial regulatory proteins, tetR family FY406_RS07125 PF03668 P-loop ATPase protein family FY406_RS07130 PF01933 Uncharacterised protein family UPF0052 FY406_RS07135 PF02650 WhiA C-terminal HTH domain FY406_RS07135 PF14527 WhiA LAGLIDADG-like domain FY406_RS07135 PF10298 WhiA N-terminal LAGLIDADG-like domain FY406_RS07140 PF03577 Peptidase family C69 FY406_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS07145 PF03466 LysR substrate binding domain FY406_RS07155 PF00390 Malic enzyme, N-terminal domain FY406_RS07155 PF03949 Malic enzyme, NAD binding domain FY406_RS07160 PF03547 Membrane transport protein FY406_RS07185 PF01297 Zinc-uptake complex component A periplasmic FY406_RS07185 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY406_RS07190 PF08240 Alcohol dehydrogenase GroES-like domain FY406_RS07190 PF00107 Zinc-binding dehydrogenase FY406_RS07205 PF01197 Ribosomal protein L31 FY406_RS07215 PF01368 DHH family FY406_RS07215 PF02272 DHHA1 domain FY406_RS07220 PF13673 Acetyltransferase (GNAT) domain FY406_RS07225 PF02798 Glutathione S-transferase, N-terminal domain FY406_RS07230 PF00962 Adenosine/AMP deaminase FY406_RS07235 PF00258 Flavodoxin FY406_RS07240 PF01458 Uncharacterized protein family (UPF0051) FY406_RS07255 PF00654 Voltage gated chloride channel FY406_RS07260 PF00654 Voltage gated chloride channel FY406_RS07265 PF01245 Ribosomal protein L19 FY406_RS07275 PF01098 Cell cycle protein FY406_RS07290 PF01751 Toprim domain FY406_RS07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS07290 PF00986 DNA gyrase B subunit, carboxyl terminus FY406_RS07290 PF00204 DNA gyrase B FY406_RS07295 PF06160 Septation ring formation regulator, EzrA FY406_RS07305 PF00155 Aminotransferase class I and II FY406_RS07310 PF13393 Histidyl-tRNA synthetase FY406_RS07315 PF01634 ATP phosphoribosyltransferase FY406_RS07320 PF00815 Histidinol dehydrogenase FY406_RS07330 PF00475 Imidazoleglycerol-phosphate dehydratase FY406_RS07335 PF00117 Glutamine amidotransferase class-I FY406_RS07340 PF00977 Histidine biosynthesis protein FY406_RS07345 PF00977 Histidine biosynthesis protein FY406_RS07350 PF01502 Phosphoribosyl-AMP cyclohydrolase FY406_RS07355 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY406_RS07360 PF08279 HTH domain FY406_RS07360 PF05043 Mga helix-turn-helix domain FY406_RS07360 PF00874 PRD domain FY406_RS07360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS07365 PF02378 Phosphotransferase system, EIIC FY406_RS07365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS07365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS07370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS07375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS07375 PF02378 Phosphotransferase system, EIIC FY406_RS07380 PF01116 Fructose-bisphosphate aldolase class-II FY406_RS07395 PF01555 DNA methylase FY406_RS07420 PF13419 Haloacid dehalogenase-like hydrolase FY406_RS07440 PF03952 Enolase, N-terminal domain FY406_RS07440 PF00113 Enolase, C-terminal TIM barrel domain FY406_RS07445 PF01183 Glycosyl hydrolases family 25 FY406_RS07445 PF08239 Bacterial SH3 domain FY406_RS07455 PF07687 Peptidase dimerisation domain FY406_RS07455 PF01546 Peptidase family M20/M25/M40 FY406_RS07475 PF02224 Cytidylate kinase FY406_RS07480 PF05198 Translation initiation factor IF-3, N-terminal domain FY406_RS07480 PF00707 Translation initiation factor IF-3, C-terminal domain FY406_RS07485 PF01632 Ribosomal protein L35 FY406_RS07490 PF00453 Ribosomal protein L20 FY406_RS07495 PF00884 Sulfatase FY406_RS07500 PF10672 S-adenosylmethionine-dependent methyltransferase FY406_RS07500 PF17785 PUA-like domain FY406_RS07505 PF01487 Type I 3-dehydroquinase FY406_RS07510 PF08501 Shikimate dehydrogenase substrate binding domain FY406_RS07510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY406_RS07515 PF01761 3-dehydroquinate synthase FY406_RS07520 PF01264 Chorismate synthase FY406_RS07525 PF02153 Prephenate dehydrogenase FY406_RS07530 PF06133 Control of competence regulator ComK, YlbF/YmcA FY406_RS07540 PF01022 Bacterial regulatory protein, arsR family FY406_RS07565 PF04294 VanW like protein FY406_RS07575 PF01202 Shikimate kinase FY406_RS07580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY406_RS07585 PF00800 Prephenate dehydratase FY406_RS07590 PF03816 Cell envelope-related transcriptional attenuator domain FY406_RS07595 PF01938 TRAM domain FY406_RS07595 PF05958 tRNA (Uracil-5-)-methyltransferase FY406_RS07605 PF00583 Acetyltransferase (GNAT) family FY406_RS07610 PF00072 Response regulator receiver domain FY406_RS07610 PF00486 Transcriptional regulatory protein, C terminal FY406_RS07615 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS07615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS07625 PF00501 AMP-binding enzyme FY406_RS07625 PF13193 AMP-binding enzyme C-terminal domain FY406_RS07630 PF03062 MBOAT, membrane-bound O-acyltransferase family FY406_RS07635 PF00550 Phosphopantetheine attachment site FY406_RS07640 PF04914 DltD protein FY406_RS07690 PF01926 50S ribosome-binding GTPase FY406_RS07690 PF09269 Domain of unknown function (DUF1967) FY406_RS07690 PF01018 GTP1/OBG FY406_RS07700 PF16326 ABC transporter C-terminal domain FY406_RS07700 PF12848 ABC transporter FY406_RS07700 PF00005 ABC transporter FY406_RS07705 PF00005 ABC transporter FY406_RS07710 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS07715 PF17757 UvrB interaction domain FY406_RS07715 PF12344 Ultra-violet resistance protein B FY406_RS07715 PF02151 UvrB/uvrC motif FY406_RS07715 PF04851 Type III restriction enzyme, res subunit FY406_RS07715 PF00271 Helicase conserved C-terminal domain FY406_RS07730 PF01381 Helix-turn-helix FY406_RS07740 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS07745 PF01464 Transglycosylase SLT domain FY406_RS07745 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS07750 PF01165 Ribosomal protein S21 FY406_RS07755 PF01741 Large-conductance mechanosensitive channel, MscL FY406_RS07765 PF01807 CHC2 zinc finger FY406_RS07765 PF08275 DNA primase catalytic core, N-terminal domain FY406_RS07765 PF10410 DnaB-helicase binding domain of primase FY406_RS07770 PF04542 Sigma-70 region 2 FY406_RS07770 PF04539 Sigma-70 region 3 FY406_RS07770 PF04545 Sigma-70, region 4 FY406_RS07770 PF03979 Sigma-70 factor, region 1.1 FY406_RS07770 PF00140 Sigma-70 factor, region 1.2 FY406_RS07775 PF01883 Iron-sulfur cluster assembly protein FY406_RS07780 PF04321 RmlD substrate binding domain FY406_RS07790 PF00535 Glycosyl transferase family 2 FY406_RS07800 PF14524 Wzt C-terminal domain FY406_RS07800 PF00005 ABC transporter FY406_RS07805 PF00535 Glycosyl transferase family 2 FY406_RS07815 PF00884 Sulfatase FY406_RS07825 PF00535 Glycosyl transferase family 2 FY406_RS07835 PF01476 LysM domain FY406_RS07835 PF05257 CHAP domain FY406_RS07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS07840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS07845 PF02875 Mur ligase family, glutamate ligase domain FY406_RS07845 PF08245 Mur ligase middle domain FY406_RS07855 PF00266 Aminotransferase class-V FY406_RS07860 PF02568 Thiamine biosynthesis protein (ThiI) FY406_RS07860 PF02926 THUMP domain FY406_RS07870 PF00344 SecY translocase FY406_RS07875 PF16993 Accessory Sec system protein Asp1 FY406_RS07880 PF16929 Accessory Sec system GspB-transporter FY406_RS07890 PF07517 SecA DEAD-like domain FY406_RS07890 PF01043 SecA preprotein cross-linking domain FY406_RS07890 PF07516 SecA Wing and Scaffold domain FY406_RS07895 PF00534 Glycosyl transferases group 1 FY406_RS07905 PF00746 LPXTG cell wall anchor motif FY406_RS07905 PF04286 Protein of unknown function (DUF445) FY406_RS07920 PF00829 Ribosomal prokaryotic L21 protein FY406_RS07930 PF01016 Ribosomal L27 protein FY406_RS07935 PF00936 BMC domain FY406_RS07940 PF09105 Elongation factor SelB, winged helix FY406_RS07940 PF09106 Elongation factor SelB, winged helix FY406_RS07940 PF09107 Elongation factor SelB, winged helix FY406_RS07940 PF03144 Elongation factor Tu domain 2 FY406_RS07940 PF00009 Elongation factor Tu GTP binding domain FY406_RS07945 PF01923 Cobalamin adenosyltransferase FY406_RS07950 PF00465 Iron-containing alcohol dehydrogenase FY406_RS07950 PF00171 Aldehyde dehydrogenase family FY406_RS07955 PF00936 BMC domain FY406_RS07960 PF03861 ANTAR domain FY406_RS07960 PF00072 Response regulator receiver domain FY406_RS07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS07965 PF12282 Signal transduction histidine kinase FY406_RS07965 PF07568 Histidine kinase FY406_RS07970 PF06277 Ethanolamine utilisation protein EutA FY406_RS07975 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY406_RS07980 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY406_RS07985 PF00936 BMC domain FY406_RS07990 PF00936 BMC domain FY406_RS07995 PF00465 Iron-containing alcohol dehydrogenase FY406_RS07995 PF00171 Aldehyde dehydrogenase family FY406_RS08000 PF00936 BMC domain FY406_RS08005 PF00936 BMC domain FY406_RS08010 PF06130 Phosphate propanoyltransferase FY406_RS08020 PF03319 Ethanolamine utilisation protein EutN/carboxysome FY406_RS08025 PF04346 Ethanolamine utilisation protein, EutH FY406_RS08040 PF01473 Putative cell wall binding repeat FY406_RS08040 PF02324 Glycosyl hydrolase family 70 FY406_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS08045 PF03466 LysR substrate binding domain FY406_RS08050 PF01252 Signal peptidase (SPase) II FY406_RS08055 PF01479 S4 domain FY406_RS08055 PF00849 RNA pseudouridylate synthase FY406_RS08065 PF00156 Phosphoribosyl transferase domain FY406_RS08070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY406_RS08070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY406_RS08075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY406_RS08075 PF00117 Glutamine amidotransferase class-I FY406_RS08080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY406_RS08080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY406_RS08080 PF02142 MGS-like domain FY406_RS08090 PF00005 ABC transporter FY406_RS08095 PF02687 FtsX-like permease family FY406_RS08095 PF12704 MacB-like periplasmic core domain FY406_RS08100 PF00886 Ribosomal protein S16 FY406_RS08110 PF01782 RimM N-terminal domain FY406_RS08110 PF05239 PRC-barrel domain FY406_RS08115 PF01746 tRNA (Guanine-1)-methyltransferase FY406_RS08120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS08125 PF00455 DeoR C terminal sensor domain FY406_RS08125 PF08220 DeoR-like helix-turn-helix domain FY406_RS08130 PF00294 pfkB family carbohydrate kinase FY406_RS08135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS08135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS08140 PF08267 Cobalamin-independent synthase, N-terminal domain FY406_RS08140 PF01717 Cobalamin-independent synthase, Catalytic domain FY406_RS08145 PF02574 Homocysteine S-methyltransferase FY406_RS08145 PF02219 Methylenetetrahydrofolate reductase FY406_RS08165 PF02645 Uncharacterised protein, DegV family COG1307 FY406_RS08170 PF05173 Dihydrodipicolinate reductase, C-terminus FY406_RS08170 PF01113 Dihydrodipicolinate reductase, N-terminus FY406_RS08175 PF12627 Probable RNA and SrmB- binding site of polymerase A FY406_RS08175 PF13735 tRNA nucleotidyltransferase domain 2 putative FY406_RS08175 PF01743 Poly A polymerase head domain FY406_RS08180 PF12848 ABC transporter FY406_RS08180 PF16326 ABC transporter C-terminal domain FY406_RS08180 PF00005 ABC transporter FY406_RS08190 PF00005 ABC transporter FY406_RS08190 PF00664 ABC transporter transmembrane region FY406_RS08195 PF00664 ABC transporter transmembrane region FY406_RS08195 PF00005 ABC transporter FY406_RS08205 PF02324 Glycosyl hydrolase family 70 FY406_RS08205 PF01473 Putative cell wall binding repeat FY406_RS08215 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY406_RS08215 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY406_RS08230 PF00005 ABC transporter FY406_RS08230 PF13732 Domain of unknown function (DUF4162) FY406_RS08240 PF14489 QueF-like protein FY406_RS08245 PF04055 Radical SAM superfamily FY406_RS08250 PF01242 6-pyruvoyl tetrahydropterin synthase FY406_RS08255 PF06508 Queuosine biosynthesis protein QueC FY406_RS08265 PF00005 ABC transporter FY406_RS08265 PF00664 ABC transporter transmembrane region FY406_RS08270 PF00005 ABC transporter FY406_RS08270 PF00664 ABC transporter transmembrane region FY406_RS08275 PF08534 Redoxin FY406_RS08295 PF04607 Region found in RelA / SpoT proteins FY406_RS08300 PF00072 Response regulator receiver domain FY406_RS08300 PF00486 Transcriptional regulatory protein, C terminal FY406_RS08305 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS08310 PF06993 Protein of unknown function (DUF1304) FY406_RS08315 PF03466 LysR substrate binding domain FY406_RS08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS08325 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS08330 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS08335 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS08340 PF00005 ABC transporter FY406_RS08345 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS08350 PF00583 Acetyltransferase (GNAT) family FY406_RS08355 PF13409 Glutathione S-transferase, N-terminal domain FY406_RS08360 PF13409 Glutathione S-transferase, N-terminal domain FY406_RS08370 PF08544 GHMP kinases C terminal FY406_RS08370 PF00288 GHMP kinases N terminal domain FY406_RS08375 PF01070 FMN-dependent dehydrogenase FY406_RS08380 PF03006 Haemolysin-III related FY406_RS08390 PF00368 Hydroxymethylglutaryl-coenzyme A reductase FY406_RS08395 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal FY406_RS08395 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal FY406_RS08400 PF00303 Thymidylate synthase FY406_RS08405 PF04973 Nicotinamide mononucleotide transporter FY406_RS08410 PF00186 Dihydrofolate reductase FY406_RS08420 PF10431 C-terminal, D2-small domain, of ClpB protein FY406_RS08420 PF07724 AAA domain (Cdc48 subfamily) FY406_RS08420 PF06689 ClpX C4-type zinc finger FY406_RS08425 PF01926 50S ribosome-binding GTPase FY406_RS08430 PF00324 Amino acid permease FY406_RS08435 PF02574 Homocysteine S-methyltransferase FY406_RS08440 PF00155 Aminotransferase class I and II FY406_RS08440 PF00392 Bacterial regulatory proteins, gntR family FY406_RS08455 PF17871 AAA lid domain FY406_RS08455 PF07724 AAA domain (Cdc48 subfamily) FY406_RS08455 PF10431 C-terminal, D2-small domain, of ClpB protein FY406_RS08455 PF00004 ATPase family associated with various cellular activities (AAA) FY406_RS08465 PF00466 Ribosomal protein L10 FY406_RS08470 PF00542 Ribosomal protein L7/L12 C-terminal domain FY406_RS08470 PF16320 Ribosomal protein L7/L12 dimerisation domain FY406_RS08485 PF06772 Bacterial low temperature requirement A protein (LtrA) FY406_RS08490 PF03466 LysR substrate binding domain FY406_RS08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS08495 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY406_RS08505 PF02627 Carboxymuconolactone decarboxylase family FY406_RS08510 PF00107 Zinc-binding dehydrogenase FY406_RS08510 PF08240 Alcohol dehydrogenase GroES-like domain FY406_RS08510 PF13823 Alcohol dehydrogenase GroES-associated FY406_RS08520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY406_RS08520 PF02770 Acyl-CoA dehydrogenase, middle domain FY406_RS08520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY406_RS08525 PF01522 Polysaccharide deacetylase FY406_RS08530 PF00742 Homoserine dehydrogenase FY406_RS08530 PF03447 Homoserine dehydrogenase, NAD binding domain FY406_RS08535 PF08544 GHMP kinases C terminal FY406_RS08535 PF00288 GHMP kinases N terminal domain FY406_RS08540 PF00892 EamA-like transporter family FY406_RS08545 PF08245 Mur ligase middle domain FY406_RS08545 PF02875 Mur ligase family, glutamate ligase domain FY406_RS08550 PF01227 GTP cyclohydrolase I FY406_RS08555 PF00809 Pterin binding enzyme FY406_RS08560 PF02152 Dihydroneopterin aldolase FY406_RS08565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY406_RS08570 PF01565 FAD binding domain FY406_RS08570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY406_RS08575 PF00005 ABC transporter FY406_RS08575 PF08402 TOBE domain FY406_RS08580 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS08585 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS08590 PF13416 Bacterial extracellular solute-binding protein FY406_RS08595 PF00874 PRD domain FY406_RS08595 PF03123 CAT RNA binding domain FY406_RS08600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FY406_RS08600 PF02378 Phosphotransferase system, EIIC FY406_RS08600 PF00367 phosphotransferase system, EIIB FY406_RS08605 PF02540 NAD synthase FY406_RS08605 PF00117 Glutamine amidotransferase class-I FY406_RS08605 PF00958 GMP synthase C terminal domain FY406_RS08610 PF07702 UTRA domain FY406_RS08610 PF00392 Bacterial regulatory proteins, gntR family FY406_RS08620 PF00571 CBS domain FY406_RS08620 PF00005 ABC transporter FY406_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS08630 PF04297 Putative helix-turn-helix protein, YlxM / p13 like FY406_RS08635 PF00448 SRP54-type protein, GTPase domain FY406_RS08635 PF02881 SRP54-type protein, helical bundle domain FY406_RS08635 PF02978 Signal peptide binding domain FY406_RS08650 PF04002 RadC-like JAB domain FY406_RS08655 PF07722 Peptidase C26 FY406_RS08660 PF02629 CoA binding domain FY406_RS08660 PF06971 Putative DNA-binding protein N-terminus FY406_RS08670 PF00266 Aminotransferase class-V FY406_RS08675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY406_RS08675 PF14572 Phosphoribosyl synthetase-associated domain FY406_RS08680 PF01928 CYTH domain FY406_RS08685 PF04607 Region found in RelA / SpoT proteins FY406_RS08690 PF01513 ATP-NAD kinase FY406_RS08695 PF00849 RNA pseudouridylate synthase FY406_RS08700 PF01515 Phosphate acetyl/butaryl transferase FY406_RS08710 PF00005 ABC transporter FY406_RS08715 PF00106 short chain dehydrogenase FY406_RS08720 PF01501 Glycosyl transferase family 8 FY406_RS08725 PF00589 Phage integrase family FY406_RS08725 PF13495 Phage integrase, N-terminal SAM-like domain FY406_RS08730 PF02436 Conserved carboxylase domain FY406_RS08730 PF00364 Biotin-requiring enzyme FY406_RS08730 PF00682 HMGL-like FY406_RS08735 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FY406_RS08740 PF04223 Citrate lyase, alpha subunit (CitF) FY406_RS08745 PF03328 HpcH/HpaI aldolase/citrate lyase family FY406_RS08750 PF06857 Malonate decarboxylase delta subunit (MdcD) FY406_RS08755 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FY406_RS08760 PF00364 Biotin-requiring enzyme FY406_RS08770 PF03600 Citrate transporter FY406_RS08780 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FY406_RS08785 PF05145 Transition state regulatory protein AbrB FY406_RS08790 PF08218 Citrate lyase ligase C-terminal domain FY406_RS08790 PF00583 Acetyltransferase (GNAT) family FY406_RS08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS08800 PF00072 Response regulator receiver domain FY406_RS08800 PF00486 Transcriptional regulatory protein, C terminal FY406_RS08810 PF00005 ABC transporter FY406_RS08815 PF01473 Putative cell wall binding repeat FY406_RS08815 PF02324 Glycosyl hydrolase family 70 FY406_RS08820 PF01134 Glucose inhibited division protein A FY406_RS08825 PF01396 Topoisomerase DNA binding C4 zinc finger FY406_RS08825 PF01751 Toprim domain FY406_RS08825 PF01131 DNA topoisomerase FY406_RS08830 PF18255 DNA processing protein A sterile alpha motif domain FY406_RS08830 PF02481 DNA recombination-mediator protein A FY406_RS08835 PF14602 Hexapeptide repeat of succinyl-transferase FY406_RS08835 PF12464 Maltose acetyltransferase FY406_RS08840 PF01351 Ribonuclease HII FY406_RS08845 PF01926 50S ribosome-binding GTPase FY406_RS08865 PF00701 Dihydrodipicolinate synthetase family FY406_RS08870 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY406_RS08870 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY406_RS08875 PF13091 PLD-like domain FY406_RS08880 PF17961 Bacterial Ig domain FY406_RS08880 PF05737 Collagen binding domain FY406_RS08880 PF00746 LPXTG cell wall anchor motif FY406_RS08885 PF00232 Glycosyl hydrolase family 1 FY406_RS08895 PF02311 AraC-like ligand binding domain FY406_RS08895 PF12833 Helix-turn-helix domain FY406_RS08905 PF01268 Formate--tetrahydrofolate ligase FY406_RS08915 PF02441 Flavoprotein FY406_RS08920 PF12822 ECF transporter, substrate-specific component FY406_RS08925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY406_RS08925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY406_RS08925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY406_RS08925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY406_RS08930 PF00664 ABC transporter transmembrane region FY406_RS08930 PF00005 ABC transporter FY406_RS08935 PF00005 ABC transporter FY406_RS08935 PF00664 ABC transporter transmembrane region FY406_RS08950 PF00464 Serine hydroxymethyltransferase FY406_RS08955 PF01300 Telomere recombination FY406_RS08960 PF05175 Methyltransferase small domain FY406_RS08965 PF00472 RF-1 domain FY406_RS08965 PF03462 PCRF domain FY406_RS08970 PF00265 Thymidine kinase FY406_RS08975 PF01361 Tautomerase enzyme FY406_RS08980 PF02424 ApbE family FY406_RS08985 PF00890 FAD binding domain FY406_RS08985 PF04205 FMN-binding domain FY406_RS08985 PF03358 NADPH-dependent FMN reductase FY406_RS08990 PF03358 NADPH-dependent FMN reductase FY406_RS08990 PF04205 FMN-binding domain FY406_RS08990 PF00890 FAD binding domain FY406_RS08995 PF02687 FtsX-like permease family FY406_RS08995 PF12704 MacB-like periplasmic core domain FY406_RS09000 PF00005 ABC transporter FY406_RS09005 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS09010 PF00005 ABC transporter FY406_RS09010 PF00571 CBS domain FY406_RS09025 PF01594 AI-2E family transporter FY406_RS09030 PF00232 Glycosyl hydrolase family 1 FY406_RS09035 PF00300 Histidine phosphatase superfamily (branch 1) FY406_RS09040 PF00300 Histidine phosphatase superfamily (branch 1) FY406_RS09050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY406_RS09055 PF03109 ABC1 family FY406_RS09085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY406_RS09090 PF04203 Sortase domain FY406_RS09095 PF03989 DNA gyrase C-terminal domain, beta-propeller FY406_RS09095 PF00521 DNA gyrase/topoisomerase IV, subunit A FY406_RS09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS09110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS09115 PF02653 Branched-chain amino acid transport system / permease component FY406_RS09120 PF02653 Branched-chain amino acid transport system / permease component FY406_RS09125 PF00005 ABC transporter FY406_RS09130 PF02608 ABC transporter substrate-binding protein PnrA-like FY406_RS09135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY406_RS09140 PF01791 DeoC/LacD family aldolase FY406_RS09145 PF00591 Glycosyl transferase family, a/b domain FY406_RS09145 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY406_RS09145 PF02885 Glycosyl transferase family, helical bundle domain FY406_RS09150 PF05175 Methyltransferase small domain FY406_RS09155 PF00485 Phosphoribulokinase / Uridine kinase family FY406_RS09160 PF01649 Ribosomal protein S20 FY406_RS09165 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS09170 PF00072 Response regulator receiver domain FY406_RS09170 PF00486 Transcriptional regulatory protein, C terminal FY406_RS09180 PF11838 ERAP1-like C-terminal domain FY406_RS09180 PF01433 Peptidase family M1 domain FY406_RS09185 PF01895 PhoU domain FY406_RS09190 PF00005 ABC transporter FY406_RS09195 PF00005 ABC transporter FY406_RS09200 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS09205 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS09210 PF12849 PBP superfamily domain FY406_RS09215 PF01189 16S rRNA methyltransferase RsmB/F FY406_RS09215 PF17126 RsmF rRNA methyltransferase first C-terminal domain FY406_RS09215 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FY406_RS09220 PF00459 Inositol monophosphatase family FY406_RS09225 PF05256 Uncharacterised protein family (UPF0223) FY406_RS09230 PF03960 ArsC family FY406_RS09235 PF06574 FAD synthetase FY406_RS09235 PF01687 Riboflavin kinase FY406_RS09240 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY406_RS09240 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY406_RS09245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS09245 PF00512 His Kinase A (phospho-acceptor) domain FY406_RS09250 PF00072 Response regulator receiver domain FY406_RS09250 PF00486 Transcriptional regulatory protein, C terminal FY406_RS09255 PF00005 ABC transporter FY406_RS09305 PF00005 ABC transporter FY406_RS09315 PF08534 Redoxin FY406_RS09320 PF02683 Cytochrome C biogenesis protein transmembrane region FY406_RS09330 PF01053 Cys/Met metabolism PLP-dependent enzyme FY406_RS09335 PF00580 UvrD/REP helicase N-terminal domain FY406_RS09335 PF13361 UvrD-like helicase C-terminal domain FY406_RS09340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS09345 PF01235 Sodium:alanine symporter family FY406_RS09350 PF16916 Dimerisation domain of Zinc Transporter FY406_RS09350 PF01545 Cation efflux family FY406_RS09355 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS09360 PF00005 ABC transporter FY406_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS09370 PF08274 PhnA Zinc-Ribbon FY406_RS09370 PF03831 PhnA domain FY406_RS09375 PF01232 Mannitol dehydrogenase Rossmann domain FY406_RS09375 PF08125 Mannitol dehydrogenase C-terminal domain FY406_RS09380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS09385 PF08279 HTH domain FY406_RS09385 PF05043 Mga helix-turn-helix domain FY406_RS09385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS09390 PF02378 Phosphotransferase system, EIIC FY406_RS09390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS09395 PF01380 SIS domain FY406_RS09400 PF10502 Signal peptidase, peptidase S26 FY406_RS09410 PF00224 Pyruvate kinase, barrel domain FY406_RS09410 PF02887 Pyruvate kinase, alpha/beta domain FY406_RS09415 PF00365 Phosphofructokinase FY406_RS09420 PF14579 Helix-hairpin-helix motif FY406_RS09420 PF01336 OB-fold nucleic acid binding domain FY406_RS09420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY406_RS09420 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY406_RS09420 PF02811 PHP domain FY406_RS09425 PF13808 DDE_Tnp_1-associated FY406_RS09425 PF01609 Transposase DDE domain FY406_RS09430 PF00392 Bacterial regulatory proteins, gntR family FY406_RS09435 PF00005 ABC transporter FY406_RS09455 PF09335 SNARE associated Golgi protein FY406_RS09465 PF00005 ABC transporter FY406_RS09465 PF00664 ABC transporter transmembrane region FY406_RS09475 PF00575 S1 RNA binding domain FY406_RS09495 PF01063 Amino-transferase class IV FY406_RS09500 PF03989 DNA gyrase C-terminal domain, beta-propeller FY406_RS09500 PF00521 DNA gyrase/topoisomerase IV, subunit A FY406_RS09510 PF00986 DNA gyrase B subunit, carboxyl terminus FY406_RS09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY406_RS09510 PF01751 Toprim domain FY406_RS09510 PF00204 DNA gyrase B FY406_RS09515 PF02660 Glycerol-3-phosphate acyltransferase FY406_RS09520 PF02872 5'-nucleotidase, C-terminal domain FY406_RS09520 PF00149 Calcineurin-like phosphoesterase FY406_RS09525 PF01979 Amidohydrolase family FY406_RS09530 PF03167 Uracil DNA glycosylase superfamily FY406_RS09535 PF00528 Binding-protein-dependent transport system inner membrane component FY406_RS09540 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY406_RS09545 PF01425 Amidase FY406_RS09550 PF01161 Phosphatidylethanolamine-binding protein FY406_RS09555 PF00156 Phosphoribosyl transferase domain FY406_RS09560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY406_RS09565 PF01180 Dihydroorotate dehydrogenase FY406_RS09570 PF00175 Oxidoreductase NAD-binding domain FY406_RS09570 PF00970 Oxidoreductase FAD-binding domain FY406_RS09570 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FY406_RS09575 PF04991 LicD family FY406_RS09580 PF01467 Cytidylyltransferase-like FY406_RS09585 PF04991 LicD family FY406_RS09590 PF00535 Glycosyl transferase family 2 FY406_RS09605 PF03275 UDP-galactopyranose mutase FY406_RS09610 PF01943 Polysaccharide biosynthesis protein FY406_RS09615 PF02397 Bacterial sugar transferase FY406_RS09625 PF03466 LysR substrate binding domain FY406_RS09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY406_RS09635 PF01048 Phosphorylase superfamily FY406_RS09640 PF00117 Glutamine amidotransferase class-I FY406_RS09650 PF01048 Phosphorylase superfamily FY406_RS09655 PF00561 alpha/beta hydrolase fold FY406_RS09660 PF01676 Metalloenzyme superfamily FY406_RS09665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY406_RS09670 PF10396 GTP-binding protein TrmE N-terminus FY406_RS09670 PF12631 MnmE helical domain FY406_RS09670 PF01926 50S ribosome-binding GTPase FY406_RS09680 PF03167 Uracil DNA glycosylase superfamily FY406_RS09685 PF01546 Peptidase family M20/M25/M40 FY406_RS09690 PF00881 Nitroreductase family FY406_RS09705 PF01541 GIY-YIG catalytic domain FY406_RS09705 PF08459 UvrC Helix-hairpin-helix N-terminal FY406_RS09705 PF02151 UvrB/uvrC motif FY406_RS09750 PF01791 DeoC/LacD family aldolase FY406_RS09755 PF02378 Phosphotransferase system, EIIC FY406_RS09755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS09755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS09760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY406_RS09760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS09765 PF00294 pfkB family carbohydrate kinase FY406_RS09775 PF13411 MerR HTH family regulatory protein FY406_RS09780 PF08240 Alcohol dehydrogenase GroES-like domain FY406_RS09780 PF00107 Zinc-binding dehydrogenase FY406_RS09805 PF14492 Elongation Factor G, domain II FY406_RS09805 PF00679 Elongation factor G C-terminus FY406_RS09805 PF00009 Elongation factor Tu GTP binding domain FY406_RS09805 PF03144 Elongation factor Tu domain 2 FY406_RS09805 PF06421 GTP-binding protein LepA C-terminus FY406_RS09815 PF00155 Aminotransferase class I and II FY406_RS09820 PF01726 LexA DNA binding domain FY406_RS09820 PF00717 Peptidase S24-like FY406_RS09835 PF09711 CRISPR-associated protein (Cas_Csn2) FY406_RS09840 PF09827 CRISPR associated protein Cas2 FY406_RS09845 PF01867 CRISPR associated protein Cas1 FY406_RS09850 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 FY406_RS09850 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 FY406_RS09850 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 FY406_RS09850 PF13395 HNH endonuclease FY406_RS09865 PF00005 ABC transporter FY406_RS09865 PF02687 FtsX-like permease family FY406_RS09865 PF12704 MacB-like periplasmic core domain FY406_RS09875 PF13344 Haloacid dehalogenase-like hydrolase FY406_RS09885 PF06969 HemN C-terminal domain FY406_RS09885 PF04055 Radical SAM superfamily FY406_RS09895 PF02525 Flavodoxin-like fold FY406_RS09900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY406_RS09900 PF00364 Biotin-requiring enzyme FY406_RS09900 PF02817 e3 binding domain FY406_RS09905 PF02780 Transketolase, C-terminal domain FY406_RS09905 PF02779 Transketolase, pyrimidine binding domain FY406_RS09910 PF00676 Dehydrogenase E1 component FY406_RS09915 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY406_RS09915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY406_RS09920 PF17871 AAA lid domain FY406_RS09920 PF02861 Clp amino terminal domain, pathogenicity island component FY406_RS09920 PF00004 ATPase family associated with various cellular activities (AAA) FY406_RS09920 PF10431 C-terminal, D2-small domain, of ClpB protein FY406_RS09920 PF07724 AAA domain (Cdc48 subfamily) FY406_RS09925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY406_RS09925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY406_RS09925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY406_RS09925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY406_RS09935 PF02457 DisA bacterial checkpoint controller nucleotide-binding FY406_RS09940 PF08353 Domain of unknown function (DUF1727) FY406_RS09940 PF08245 Mur ligase middle domain FY406_RS09945 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY406_RS09950 PF16326 ABC transporter C-terminal domain FY406_RS09950 PF00005 ABC transporter FY406_RS09950 PF12848 ABC transporter FY406_RS09955 PF01270 Glycosyl hydrolases family 8 FY406_RS09975 PF02350 UDP-N-acetylglucosamine 2-epimerase FY406_RS09985 PF06998 Protein of unknown function (DUF1307) FY406_RS09990 PF00756 Putative esterase FY406_RS10000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY406_RS10000 PF00753 Metallo-beta-lactamase superfamily FY406_RS10000 PF17770 Ribonuclease J C-terminal domain FY406_RS10005 PF00005 ABC transporter FY406_RS10020 PF05670 NFACT protein RNA binding domain FY406_RS10025 PF00324 Amino acid permease FY406_RS10030 PF03306 Alpha-acetolactate decarboxylase FY406_RS10035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY406_RS10035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY406_RS10035 PF00205 Thiamine pyrophosphate enzyme, central domain FY406_RS10045 PF01594 AI-2E family transporter FY406_RS10050 PF00293 NUDIX domain FY406_RS10070 PF16363 GDP-mannose 4,6 dehydratase FY406_RS10080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY406_RS10085 PF00483 Nucleotidyl transferase FY406_RS10090 PF01266 FAD dependent oxidoreductase FY406_RS10095 PF01784 NIF3 (NGG1p interacting factor 3) FY406_RS10100 PF04816 tRNA (adenine(22)-N(1))-methyltransferase FY406_RS10110 PF04204 Homoserine O-succinyltransferase FY406_RS10115 PF00156 Phosphoribosyl transferase domain FY406_RS10120 PF01609 Transposase DDE domain FY406_RS10120 PF13808 DDE_Tnp_1-associated FY406_RS10125 PF17768 RecJ OB domain FY406_RS10125 PF02272 DHHA1 domain FY406_RS10125 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FY406_RS10125 PF01368 DHH family FY406_RS10130 PF00106 short chain dehydrogenase FY406_RS10135 PF00753 Metallo-beta-lactamase superfamily FY406_RS10135 PF12706 Beta-lactamase superfamily domain FY406_RS10140 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FY406_RS10140 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FY406_RS10145 PF01926 50S ribosome-binding GTPase FY406_RS10145 PF13167 GTP-binding GTPase N-terminal FY406_RS10145 PF16360 GTP-binding GTPase Middle Region FY406_RS10160 PF01381 Helix-turn-helix FY406_RS10170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY406_RS10170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY406_RS10195 PF01263 Aldose 1-epimerase FY406_RS10200 PF00232 Glycosyl hydrolase family 1 FY406_RS10205 PF02378 Phosphotransferase system, EIIC FY406_RS10205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FY406_RS10210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FY406_RS10215 PF00874 PRD domain FY406_RS10215 PF03123 CAT RNA binding domain FY406_RS10220 PF03611 PTS system sugar-specific permease component FY406_RS10235 PF01791 DeoC/LacD family aldolase FY406_RS10240 PF00294 pfkB family carbohydrate kinase FY406_RS10245 PF02502 Ribose/Galactose Isomerase FY406_RS10250 PF02502 Ribose/Galactose Isomerase FY406_RS10255 PF08220 DeoR-like helix-turn-helix domain FY406_RS10255 PF00455 DeoR C terminal sensor domain FY406_RS10260 PF01370 NAD dependent epimerase/dehydratase family FY406_RS10270 PF12705 PD-(D/E)XK nuclease superfamily FY406_RS10270 PF00580 UvrD/REP helicase N-terminal domain FY406_RS10270 PF13361 UvrD-like helicase C-terminal domain FY406_RS10275 PF12705 PD-(D/E)XK nuclease superfamily FY406_RS10285 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ FY406_RS10295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY406_RS10295 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY406_RS10295 PF14579 Helix-hairpin-helix motif FY406_RS10295 PF11490 DNA polymerase III polC-type N-terminus II FY406_RS10295 PF14480 DNA polymerase III polC-type N-terminus I FY406_RS10295 PF02811 PHP domain FY406_RS10295 PF00929 Exonuclease FY406_RS10300 PF01867 CRISPR associated protein Cas1 FY406_RS10315 PF09344 CT1975-like protein FY406_RS10325 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) FY406_RS10330 PF18395 Cas3 C-terminal domain FY406_RS10330 PF18019 HD domain FY406_RS10330 PF00270 DEAD/DEAH box helicase FY406_RS10335 PF04228 Putative neutral zinc metallopeptidase FY406_RS10345 PF00005 ABC transporter