SSA_0001 SM00382 ATPases associated with a variety of cellular activities SSA_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain SSA_0002 SM00480 DNA polymerase III beta subunit SSA_0008 SM00487 DEAD-like helicases superfamily SSA_0008 SM00490 helicase superfamily c-terminal domain SSA_0008 SM00982 SSA_0008 SSA_0008 SM01058 CarD-like/TRCF domain SSA_0009 SM00363 S4 RNA-binding domain SSA_0013 SM00977 TilS substrate C-terminal domain SSA_0015 SM00382 ATPases associated with a variety of cellular activities SSA_0020 SM01400 SSA_0020 SSA_0030 SM01211 SSA_0030 SSA_0035 SM00798 AICARFT/IMPCHase bienzyme SSA_0035 SM00851 MGS-like domain SSA_0037 SM01209 SSA_0037 SSA_0037 SM01210 SSA_0037 SSA_0039 SM01001 AIR carboxylase SSA_0046 SM00998 Adenylosuccinate lyase C-terminus SSA_0050 SM01120 SSA_0050 SSA_0052 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSA_0052 SM00866 SSA_0052 SSA_0061 SM01133 SSA_0061 SSA_0063 SM00382 ATPases associated with a variety of cellular activities SSA_0065 SM00226 Low molecular weight phosphatase family SSA_0066 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SSA_0072 SM00382 ATPases associated with a variety of cellular activities SSA_0078 SM01130 SSA_0078 SSA_0094 SM00257 Lysin motif SSA_0100 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SSA_0100 SM00474 3'-5' exonuclease SSA_0100 SM00475 5'-3' exonuclease SSA_0100 SM00482 DNA polymerase A domain SSA_0101 SM00881 CoA binding domain SSA_0106 SM01403 SSA_0106 SSA_0110 SM01382 SSA_0110 SSA_0110 SM01383 SSA_0110 SSA_0113 SM00322 K homology RNA-binding domain SSA_0117 SM01374 SSA_0117 SSA_0118 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SSA_0129 SM00316 Ribosomal protein S1-like RNA-binding domain SSA_0132 SM00662 RNA polymerases D SSA_0135 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_0136 SM00382 ATPases associated with a variety of cellular activities SSA_0148 SM00382 ATPases associated with a variety of cellular activities SSA_0156 SM00382 ATPases associated with a variety of cellular activities SSA_0156 SM01086 C-terminal, D2-small domain, of ClpB protein SSA_0171 SM00530 Helix-turn-helix XRE-family like proteins SSA_0172 SM00530 Helix-turn-helix XRE-family like proteins SSA_0174 SM00363 S4 RNA-binding domain SSA_0177 SM00663 RNA polymerase I subunit A N-terminus SSA_0200 SM00905 Dihydroneopterin aldolase SSA_0201 SM00382 ATPases associated with a variety of cellular activities SSA_0204 SM00448 cheY-homologous receiver domain SSA_0204 SM00862 Transcriptional regulatory protein, C terminal SSA_0205 SM00387 Histidine kinase-like ATPases SSA_0205 SM00388 His Kinase A (phosphoacceptor) domain SSA_0216 SM00387 Histidine kinase-like ATPases SSA_0217 SM00421 helix_turn_helix, Lux Regulon SSA_0217 SM00448 cheY-homologous receiver domain SSA_0225 SM00883 Chaperonin 10 Kd subunit SSA_0236 SM00382 ATPases associated with a variety of cellular activities SSA_0250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSA_0250 SM00954 Region found in RelA / SpoT proteins SSA_0255 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_0256 SM00529 Helix-turn-helix diphteria tox regulatory element SSA_0256 SM00899 SSA_0256 SSA_0262 SM00382 ATPases associated with a variety of cellular activities SSA_0278 SM00420 helix_turn_helix, Deoxyribose operon repressor SSA_0278 SM01134 SSA_0278 SSA_0292 SM00342 helix_turn_helix, arabinose operon control protein SSA_0296 SM00530 Helix-turn-helix XRE-family like proteins SSA_0297 SM00919 Malic enzyme, NAD binding domain SSA_0297 SM01274 SSA_0297 SSA_0304 SM00257 Lysin motif SSA_0306 SM00422 helix_turn_helix, mercury resistance SSA_0307 SM01230 SSA_0307 SSA_0312 SM00849 Metallo-beta-lactamase superfamily SSA_0315 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_0322 SM00422 helix_turn_helix, mercury resistance SSA_0328 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SSA_0328 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SSA_0355 SM00463 Small MutS-related domain SSA_0355 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SSA_0355 SM00534 ATPase domain of DNA mismatch repair MUTS family SSA_0371 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SSA_0376 SM00382 ATPases associated with a variety of cellular activities SSA_0376 SM00930 SSA_0376 SSA_0380 SM00854 Bacterial capsule synthesis protein PGA_cap SSA_0382 SM00342 helix_turn_helix, arabinose operon control protein SSA_0384 SM00460 Transglutaminase/protease-like homologues SSA_0386 SM00382 ATPases associated with a variety of cellular activities SSA_0387 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSA_0388 SM00534 ATPase domain of DNA mismatch repair MUTS family SSA_0393 SM00382 ATPases associated with a variety of cellular activities SSA_0401 SM00448 cheY-homologous receiver domain SSA_0401 SM00862 Transcriptional regulatory protein, C terminal SSA_0402 SM00387 Histidine kinase-like ATPases SSA_0402 SM00388 His Kinase A (phosphoacceptor) domain SSA_0405 SM00530 Helix-turn-helix XRE-family like proteins SSA_0407 SM00382 ATPases associated with a variety of cellular activities SSA_0409 SM00382 ATPases associated with a variety of cellular activities SSA_0412 SM00382 ATPases associated with a variety of cellular activities SSA_0418 SM00342 helix_turn_helix, arabinose operon control protein SSA_0421 SM00855 Phosphoglycerate mutase family SSA_0422 SM00855 Phosphoglycerate mutase family SSA_0427 SM01043 Bacterial transcriptional activator domain SSA_0434 SM01221 SSA_0434 SSA_0434 SM01222 SSA_0434 SSA_0442 SM00382 ATPases associated with a variety of cellular activities SSA_0448 SM00382 ATPases associated with a variety of cellular activities SSA_0450 SM00841 Elongation factor P, C-terminal SSA_0450 SM01185 SSA_0450 SSA_0453 SM00642 Alpha-amylase domain SSA_0454 SM00354 helix_turn _helix lactose operon repressor SSA_0455 SM00640 Glycosyl hydrolases family 32 SSA_0460 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_0461 SM00382 ATPases associated with a variety of cellular activities SSA_0462 SM00382 ATPases associated with a variety of cellular activities SSA_0480 SM00382 ATPases associated with a variety of cellular activities SSA_0487 SM01004 Delta-aminolevulinic acid dehydratase SSA_0491 SM00855 Phosphoglycerate mutase family SSA_0494 SM00382 ATPases associated with a variety of cellular activities SSA_0495 SM00382 ATPases associated with a variety of cellular activities SSA_0503 SM00382 ATPases associated with a variety of cellular activities SSA_0504 SM00382 ATPases associated with a variety of cellular activities SSA_0505 SM00903 Flavin reductase like domain SSA_0515 SM00877 SSA_0515 SSA_0516 SM00448 cheY-homologous receiver domain SSA_0516 SM01012 SSA_0516 SSA_0517 SM00911 HWE histidine kinase SSA_0521 SM00877 SSA_0521 SSA_0522 SM00877 SSA_0522 SSA_0524 SM00877 SSA_0524 SSA_0525 SM00877 SSA_0525 SSA_0532 SM00877 SSA_0532 SSA_0543 SM00957 SecA DEAD-like domain SSA_0543 SM00958 SecA preprotein cross-linking domain SSA_0548 SM01005 Alanine racemase, C-terminal domain SSA_0549 SM00487 DEAD-like helicases superfamily SSA_0549 SM00490 helicase superfamily c-terminal domain SSA_0551 SM00870 SSA_0551 SSA_0571 SM00845 GatB domain SSA_0572 SM00829 Enoylreductase SSA_0577 SM01103 SSA_0577 SSA_0579 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSA_0588 SM00062 Bacterial periplasmic substrate-binding proteins SSA_0593 SM00450 Rhodanese Homology Domain SSA_0594 SM00342 helix_turn_helix, arabinose operon control protein SSA_0602 SM00382 ATPases associated with a variety of cellular activities SSA_0606 SM00382 ATPases associated with a variety of cellular activities SSA_0612 SM00530 Helix-turn-helix XRE-family like proteins SSA_0617 SM00244 prohibitin homologues SSA_0622 SM00530 Helix-turn-helix XRE-family like proteins SSA_0641 SM00871 Bacterial transcription activator, effector binding domain SSA_0647 SM00450 Rhodanese Homology Domain SSA_0650 SM00838 Elongation factor G C-terminus SSA_0655 SM00842 Cell division protein FtsA SSA_0656 SM00864 Tubulin/FtsZ family, GTPase domain SSA_0656 SM00865 Tubulin/FtsZ family, C-terminal domain SSA_0659 SM00363 S4 RNA-binding domain SSA_0662 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_0669 SM00382 ATPases associated with a variety of cellular activities SSA_0669 SM01086 C-terminal, D2-small domain, of ClpB protein SSA_0683 SM00411 bacterial (prokaryotic) histone like domain SSA_0688 SM00855 Phosphoglycerate mutase family SSA_0690 SM00493 SSA_0690 SSA_0704 SM01329 SSA_0704 SSA_0706 SM00487 DEAD-like helicases superfamily SSA_0706 SM00490 helicase superfamily c-terminal domain SSA_0707 SM00420 helix_turn_helix, Deoxyribose operon repressor SSA_0707 SM01134 SSA_0707 SSA_0713 SM00563 Phosphate acyltransferases SSA_0715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SSA_0716 SM00849 Metallo-beta-lactamase superfamily SSA_0724 SM00382 ATPases associated with a variety of cellular activities SSA_0730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSA_0734 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSA_0736 SM00100 Cyclic nucleotide-monophosphate binding domain SSA_0736 SM00419 helix_turn_helix, cAMP Regulatory protein SSA_0756 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SSA_0757 SM00859 Semialdehyde dehydrogenase, NAD binding domain SSA_0761 SM00530 Helix-turn-helix XRE-family like proteins SSA_0767 SM00046 Diacylglycerol kinase catalytic domain (presumed) SSA_0775 SM00642 Alpha-amylase domain SSA_0780 SM00014 Acid phosphatase homologues SSA_0788 SM00382 ATPases associated with a variety of cellular activities SSA_0793 SM00892 DNA/RNA non-specific endonuclease SSA_0796 SM00382 ATPases associated with a variety of cellular activities SSA_0824 SM00400 zinc finger SSA_0824 SM00493 SSA_0824 SSA_0836 SM00957 SecA DEAD-like domain SSA_0836 SM00958 SecA preprotein cross-linking domain SSA_0845 SM00382 ATPases associated with a variety of cellular activities SSA_0846 SM00481 DNA polymerase alpha chain like domain SSA_0864 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSA_0866 SM00831 Cation transporter/ATPase, N-terminus SSA_0869 SM00937 SSA_0869 SSA_0870 SM00382 ATPases associated with a variety of cellular activities SSA_0872 SM00849 Metallo-beta-lactamase superfamily SSA_0873 SM00479 SSA_0873 SSA_0873 SM00487 DEAD-like helicases superfamily SSA_0873 SM00491 SSA_0873 SSA_0878 SM00387 Histidine kinase-like ATPases SSA_0878 SM00433 TopoisomeraseII SSA_0886 SM01192 SSA_0886 SSA_0886 SM01193 SSA_0886 SSA_0888 SM00116 Domain in cystathionine beta-synthase and other proteins. SSA_0888 SM00924 MgtE intracellular N domain SSA_0894 SM00382 ATPases associated with a variety of cellular activities SSA_0896 SM00448 cheY-homologous receiver domain SSA_0896 SM00862 Transcriptional regulatory protein, C terminal SSA_0897 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SSA_0897 SM00387 Histidine kinase-like ATPases SSA_0897 SM00388 His Kinase A (phosphoacceptor) domain SSA_0900 SM00028 Tetratricopeptide repeats SSA_0909 SM00966 SpoVT / AbrB like domain SSA_0910 SM00382 ATPases associated with a variety of cellular activities SSA_0914 SM00873 B3/4 domain SSA_0914 SM00874 tRNA synthetase B5 domain SSA_0914 SM00896 Ferredoxin-fold anticodon binding domain SSA_0925 SM00382 ATPases associated with a variety of cellular activities SSA_0928 SM00382 ATPases associated with a variety of cellular activities SSA_0929 SM00382 ATPases associated with a variety of cellular activities SSA_0936 SM00904 Riboflavin kinase SSA_0944 SM00382 ATPases associated with a variety of cellular activities SSA_0945 SM00382 ATPases associated with a variety of cellular activities SSA_0959 SM00448 cheY-homologous receiver domain SSA_0959 SM00862 Transcriptional regulatory protein, C terminal SSA_0960 SM00387 Histidine kinase-like ATPases SSA_0960 SM00388 His Kinase A (phosphoacceptor) domain SSA_0964 SM00487 DEAD-like helicases superfamily SSA_0964 SM00490 helicase superfamily c-terminal domain SSA_0975 SM00917 LeuA allosteric (dimerisation) domain SSA_0977 SM01329 SSA_0977 SSA_0984 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_0986 SM00382 ATPases associated with a variety of cellular activities SSA_0991 SM00892 DNA/RNA non-specific endonuclease SSA_0997 SM00382 ATPases associated with a variety of cellular activities SSA_1000 SM00354 helix_turn _helix lactose operon repressor SSA_1001 SM00342 helix_turn_helix, arabinose operon control protein SSA_1006 SM00642 Alpha-amylase domain SSA_1007 SM00382 ATPases associated with a variety of cellular activities SSA_1018 SM01208 SSA_1018 SSA_1024 SM00642 Alpha-amylase domain SSA_1026 SM00382 ATPases associated with a variety of cellular activities SSA_1028 SM00530 Helix-turn-helix XRE-family like proteins SSA_1035 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SSA_1036 SM01133 SSA_1036 SSA_1039 SM00382 ATPases associated with a variety of cellular activities SSA_1048 SM00382 ATPases associated with a variety of cellular activities SSA_1054 SM00116 Domain in cystathionine beta-synthase and other proteins. SSA_1054 SM00420 helix_turn_helix, Deoxyribose operon repressor SSA_1058 SM00981 SSA_1058 SSA_1063 SM00327 von Willebrand factor (vWF) type A domain SSA_1070 SM00363 S4 RNA-binding domain SSA_1072 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SSA_1075 SM00729 Elongator protein 3, MiaB family, Radical SAM SSA_1080 SM00420 helix_turn_helix, Deoxyribose operon repressor SSA_1080 SM01134 SSA_1080 SSA_1087 SM00382 ATPases associated with a variety of cellular activities SSA_1093 SM00382 ATPases associated with a variety of cellular activities SSA_1093 SM00994 ClpX C4-type zinc finger SSA_1093 SM01086 C-terminal, D2-small domain, of ClpB protein SSA_1095 SM00047 Lysozyme subfamily 2 SSA_1100 SM00382 ATPases associated with a variety of cellular activities SSA_1106 SM01208 SSA_1106 SSA_1107 SM00382 ATPases associated with a variety of cellular activities SSA_1109 SM00382 ATPases associated with a variety of cellular activities SSA_1113 SM00448 cheY-homologous receiver domain SSA_1113 SM00862 Transcriptional regulatory protein, C terminal SSA_1114 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SSA_1114 SM00387 Histidine kinase-like ATPases SSA_1114 SM00388 His Kinase A (phosphoacceptor) domain SSA_1119 SM00342 helix_turn_helix, arabinose operon control protein SSA_1119 SM00448 cheY-homologous receiver domain SSA_1120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SSA_1120 SM00387 Histidine kinase-like ATPases SSA_1136 SM00382 ATPases associated with a variety of cellular activities SSA_1136 SM01086 C-terminal, D2-small domain, of ClpB protein SSA_1139 SM00861 Transketolase, pyrimidine binding domain SSA_1152 SM00937 SSA_1152 SSA_1165 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSA_1165 SM00866 SSA_1165 SSA_1167 SM00382 ATPases associated with a variety of cellular activities SSA_1167 SM00962 SRP54-type protein, GTPase domain SSA_1167 SM00963 SRP54-type protein, helical bundle domain SSA_1176 SM00861 Transketolase, pyrimidine binding domain SSA_1184 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SSA_1184 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SSA_1184 SM00493 SSA_1184 SSA_1186 SM01266 SSA_1186 SSA_1187 SM01061 CAT RNA binding domain SSA_1193 SM01130 SSA_1193 SSA_1194 SM00859 Semialdehyde dehydrogenase, NAD binding domain SSA_1206 SM00478 endonuclease III SSA_1210 SM00954 Region found in RelA / SpoT proteins SSA_1211 SM01118 SSA_1211 SSA_1212 SM01400 SSA_1212 SSA_1216 SM00881 CoA binding domain SSA_1220 SM00434 DNA Topoisomerase IV SSA_1223 SM00316 Ribosomal protein S1-like RNA-binding domain SSA_1226 SM00434 DNA Topoisomerase IV SSA_1232 SM00387 Histidine kinase-like ATPases SSA_1232 SM00433 TopoisomeraseII SSA_1233 SM01207 SSA_1233 SSA_1237 SM00986 Uracil DNA glycosylase superfamily SSA_1237 SM00987 UreE urease accessory protein, C-terminal domain SSA_1241 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SSA_1268 SM00830 Chorismate mutase type II SSA_1278 SM00450 Rhodanese Homology Domain SSA_1279 SM00829 Enoylreductase SSA_1281 SM00986 Uracil DNA glycosylase superfamily SSA_1281 SM00987 UreE urease accessory protein, C-terminal domain SSA_1297 SM00465 GIY-YIG type nucleases (URI domain) SSA_1313 SM00342 helix_turn_helix, arabinose operon control protein SSA_1313 SM00871 Bacterial transcription activator, effector binding domain SSA_1318 SM00838 Elongation factor G C-terminus SSA_1325 SM00822 SSA_1325 SSA_1341 SM00851 MGS-like domain SSA_1341 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SSA_1341 SM01209 SSA_1341 SSA_1342 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SSA_1356 SM00487 DEAD-like helicases superfamily SSA_1356 SM00490 helicase superfamily c-terminal domain SSA_1359 SM00062 Bacterial periplasmic substrate-binding proteins SSA_1359 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SSA_1360 SM00382 ATPases associated with a variety of cellular activities SSA_1373 SM00382 ATPases associated with a variety of cellular activities SSA_1374 SM00382 ATPases associated with a variety of cellular activities SSA_1375 SM00382 ATPases associated with a variety of cellular activities SSA_1385 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_1401 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSA_1402 SM00382 ATPases associated with a variety of cellular activities SSA_1403 SM00382 ATPases associated with a variety of cellular activities SSA_1457 SM00642 Alpha-amylase domain SSA_1482 SM00642 Alpha-amylase domain SSA_1483 SM00046 Diacylglycerol kinase catalytic domain (presumed) SSA_1484 SM00292 breast cancer carboxy-terminal domain SSA_1484 SM00532 Ligase N family SSA_1487 SM00873 B3/4 domain SSA_1488 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_1492 SM00116 Domain in cystathionine beta-synthase and other proteins. SSA_1507 SM00382 ATPases associated with a variety of cellular activities SSA_1528 SM00855 Phosphoglycerate mutase family SSA_1531 SM00382 ATPases associated with a variety of cellular activities SSA_1550 SM00731 SprT homologues. SSA_1551 SM00316 Ribosomal protein S1-like RNA-binding domain SSA_1551 SM00732 Likely ribonuclease with RNase H fold. SSA_1557 SM00382 ATPases associated with a variety of cellular activities SSA_1557 SM00962 SRP54-type protein, GTPase domain SSA_1557 SM00963 SRP54-type protein, helical bundle domain SSA_1560 SM00968 SMC proteins Flexible Hinge Domain SSA_1561 SM00358 Double-stranded RNA binding motif SSA_1561 SM00535 Ribonuclease III family SSA_1563 SM00849 Metallo-beta-lactamase superfamily SSA_1564 SM00091 PAS domain SSA_1564 SM00387 Histidine kinase-like ATPases SSA_1564 SM00388 His Kinase A (phosphoacceptor) domain SSA_1565 SM00448 cheY-homologous receiver domain SSA_1565 SM00862 Transcriptional regulatory protein, C terminal SSA_1566 SM00382 ATPases associated with a variety of cellular activities SSA_1567 SM00062 Bacterial periplasmic substrate-binding proteins SSA_1567 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SSA_1571 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SSA_1576 SM00354 helix_turn _helix lactose operon repressor SSA_1579 SM00382 ATPases associated with a variety of cellular activities SSA_1589 SM00382 ATPases associated with a variety of cellular activities SSA_1602 SM00316 Ribosomal protein S1-like RNA-binding domain SSA_1602 SM00955 SSA_1602 SSA_1607 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SSA_1607 SM01232 SSA_1607 SSA_1615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SSA_1615 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SSA_1623 SM00649 Ribosomal protein L11/L12 SSA_1626 SM00382 ATPases associated with a variety of cellular activities SSA_1626 SM00843 SSA_1626 SSA_1636 SM00382 ATPases associated with a variety of cellular activities SSA_1646 SM01022 SSA_1646 SSA_1656 SM00245 tail specific protease SSA_1660 SM00382 ATPases associated with a variety of cellular activities SSA_1676 SM00850 LytTr DNA-binding domain SSA_1679 SM00382 ATPases associated with a variety of cellular activities SSA_1681 SM00382 ATPases associated with a variety of cellular activities SSA_1684 SM00387 Histidine kinase-like ATPases SSA_1685 SM00448 cheY-homologous receiver domain SSA_1685 SM00862 Transcriptional regulatory protein, C terminal SSA_1691 SM00530 Helix-turn-helix XRE-family like proteins SSA_1695 SM01061 CAT RNA binding domain SSA_1696 SM01133 SSA_1696 SSA_1701 SM00420 helix_turn_helix, Deoxyribose operon repressor SSA_1701 SM01134 SSA_1701 SSA_1710 SM00530 Helix-turn-helix XRE-family like proteins SSA_1711 SM00478 endonuclease III SSA_1724 SM00116 Domain in cystathionine beta-synthase and other proteins. SSA_1725 SM00382 ATPases associated with a variety of cellular activities SSA_1726 SM00382 ATPases associated with a variety of cellular activities SSA_1734 SM00831 Cation transporter/ATPase, N-terminus SSA_1741 SM00382 ATPases associated with a variety of cellular activities SSA_1748 SM01131 SSA_1748 SSA_1751 SM00642 Alpha-amylase domain SSA_1753 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSA_1753 SM00866 SSA_1753 SSA_1761 SM01091 Transporter associated domain SSA_1763 SM00382 ATPases associated with a variety of cellular activities SSA_1767 SM00382 ATPases associated with a variety of cellular activities SSA_1770 SM00729 Elongator protein 3, MiaB family, Radical SAM SSA_1772 SM00014 Acid phosphatase homologues SSA_1777 SM00363 S4 RNA-binding domain SSA_1781 SM00116 Domain in cystathionine beta-synthase and other proteins. SSA_1790 SM00967 RNA 2'-O ribose methyltransferase substrate binding SSA_1793 SM00387 Histidine kinase-like ATPases SSA_1793 SM00388 His Kinase A (phosphoacceptor) domain SSA_1794 SM00448 cheY-homologous receiver domain SSA_1794 SM00862 Transcriptional regulatory protein, C terminal SSA_1795 SM00954 Region found in RelA / SpoT proteins SSA_1802 SM00487 DEAD-like helicases superfamily SSA_1802 SM00490 helicase superfamily c-terminal domain SSA_1810 SM00448 cheY-homologous receiver domain SSA_1810 SM00862 Transcriptional regulatory protein, C terminal SSA_1811 SM01350 SSA_1811 SSA_1836 SM00382 ATPases associated with a variety of cellular activities SSA_1836 SM00487 DEAD-like helicases superfamily SSA_1836 SM00490 helicase superfamily c-terminal domain SSA_1840 SM00316 Ribosomal protein S1-like RNA-binding domain SSA_1842 SM00421 helix_turn_helix, Lux Regulon SSA_1842 SM00448 cheY-homologous receiver domain SSA_1843 SM00387 Histidine kinase-like ATPases SSA_1845 SM00220 Serine/Threonine protein kinases, catalytic domain SSA_1845 SM00740 SSA_1845 SSA_1846 SM00331 Sigma factor PP2C-like phosphatases SSA_1846 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SSA_1849 SM00487 DEAD-like helicases superfamily SSA_1849 SM00490 helicase superfamily c-terminal domain SSA_1850 SM01409 SSA_1850 SSA_1851 SM00072 Guanylate kinase homologues. SSA_1852 SM00322 K homology RNA-binding domain SSA_1852 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSA_1855 SM00981 SSA_1855 SSA_1867 SM00382 ATPases associated with a variety of cellular activities SSA_1869 SM00487 DEAD-like helicases superfamily SSA_1869 SM00490 helicase superfamily c-terminal domain SSA_1871 SM00740 SSA_1871 SSA_1874 SM00530 Helix-turn-helix XRE-family like proteins SSA_1900 SM00322 K homology RNA-binding domain SSA_1905 SM00382 ATPases associated with a variety of cellular activities SSA_1917 SM00829 Enoylreductase SSA_1932 SM00878 Biotin carboxylase C-terminal domain SSA_1935 SM00825 Beta-ketoacyl synthase SSA_1936 SM00822 SSA_1936 SSA_1937 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SSA_1941 SM00347 helix_turn_helix multiple antibiotic resistance protein SSA_1944 SM00382 ATPases associated with a variety of cellular activities SSA_1945 SM00382 ATPases associated with a variety of cellular activities SSA_1951 SM00936 Penicillin-binding protein 5, C-terminal domain SSA_1956 SM00382 ATPases associated with a variety of cellular activities SSA_1961 SM00062 Bacterial periplasmic substrate-binding proteins SSA_1962 SM00382 ATPases associated with a variety of cellular activities SSA_1965 SM00244 prohibitin homologues SSA_1972 SM00421 helix_turn_helix, Lux Regulon SSA_1972 SM00448 cheY-homologous receiver domain SSA_1975 SM00382 ATPases associated with a variety of cellular activities SSA_1978 SM01120 SSA_1978 SSA_1978 SM01121 SSA_1978 SSA_1982 SM00850 LytTr DNA-binding domain SSA_1989 SM00382 ATPases associated with a variety of cellular activities SSA_1995 SM00873 B3/4 domain SSA_2004 SM01208 SSA_2004 SSA_2005 SM00271 DnaJ molecular chaperone homology domain SSA_2011 SM00382 ATPases associated with a variety of cellular activities SSA_2015 SM00855 Phosphoglycerate mutase family SSA_2016 SM00855 Phosphoglycerate mutase family SSA_2022 SM00422 helix_turn_helix, mercury resistance SSA_2023 SM00635 Bacterial Ig-like domain 2 SSA_2023 SM00640 Glycosyl hydrolases family 32 SSA_2023 SM01208 SSA_2023 SSA_2037 SM00967 RNA 2'-O ribose methyltransferase substrate binding SSA_2040 SM00382 ATPases associated with a variety of cellular activities SSA_2042 SM00535 Ribonuclease III family SSA_2044 SM00840 SSA_2044 SSA_2049 SM00316 Ribosomal protein S1-like RNA-binding domain SSA_2049 SM00322 K homology RNA-binding domain SSA_2058 SM01387 SSA_2058 SSA_2059 SM00363 S4 RNA-binding domain SSA_2066 SM00479 SSA_2066 SSA_2066 SM00481 DNA polymerase alpha chain like domain SSA_2074 SM01323 SSA_2074 SSA_2075 SM00861 Transketolase, pyrimidine binding domain SSA_2079 SM01266 SSA_2079 SSA_2087 SM00354 helix_turn _helix lactose operon repressor SSA_2088 SM01007 Class II Aldolase and Adducin N-terminal domain SSA_2090 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SSA_2096 SM00382 ATPases associated with a variety of cellular activities SSA_2096 SM01086 C-terminal, D2-small domain, of ClpB protein SSA_2097 SM00382 ATPases associated with a variety of cellular activities SSA_2101 SM00062 Bacterial periplasmic substrate-binding proteins SSA_2108 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SSA_2109 SM00838 Elongation factor G C-terminus SSA_2109 SM00889 Elongation factor G, domain IV SSA_2118 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SSA_2123 SM00650 Ribosomal RNA adenine dimethylases SSA_2125 SM00493 SSA_2125 SSA_2129 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSA_2138 SM00393 Putative single-stranded nucleic acids-binding domain SSA_2138 SM01245 SSA_2138 SSA_2146 SM00849 Metallo-beta-lactamase superfamily SSA_2152 SM00382 ATPases associated with a variety of cellular activities SSA_2154 SM00947 Carbonic anhydrase SSA_2157 SM00382 ATPases associated with a variety of cellular activities SSA_2159 SM00855 Phosphoglycerate mutase family SSA_2166 SM00382 ATPases associated with a variety of cellular activities SSA_2167 SM00382 ATPases associated with a variety of cellular activities SSA_2185 SM00788 Adenylosuccinate synthetase SSA_2199 SM00382 ATPases associated with a variety of cellular activities SSA_2199 SM01086 C-terminal, D2-small domain, of ClpB protein SSA_2205 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SSA_2205 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SSA_2234 SM00155 Phospholipase D. Active site motifs. SSA_2240 SM00732 Likely ribonuclease with RNase H fold. SSA_2245 SM00382 ATPases associated with a variety of cellular activities SSA_2246 SM00852 Probable molybdopterin binding domain SSA_2247 SM00530 Helix-turn-helix XRE-family like proteins SSA_2249 SM00382 ATPases associated with a variety of cellular activities SSA_2251 SM00530 Helix-turn-helix XRE-family like proteins SSA_2254 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SSA_2255 SM00530 Helix-turn-helix XRE-family like proteins SSA_2257 SM00853 MutL C terminal dimerisation domain SSA_2257 SM01340 SSA_2257 SSA_2260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SSA_2260 SM00534 ATPase domain of DNA mismatch repair MUTS family SSA_2262 SM00836 DALR anticodon binding domain SSA_2262 SM01016 Arginyl tRNA synthetase N terminal dom SSA_2267 SM00354 helix_turn _helix lactose operon repressor SSA_2268 SM00642 Alpha-amylase domain SSA_2277 SM00382 ATPases associated with a variety of cellular activities SSA_2289 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSA_2296 SM00530 Helix-turn-helix XRE-family like proteins SSA_2301 SM00047 Lysozyme subfamily 2 SSA_2311 SM00327 von Willebrand factor (vWF) type A domain SSA_2317 SM00382 ATPases associated with a variety of cellular activities SSA_2318 SM00382 ATPases associated with a variety of cellular activities SSA_2328 SM00420 helix_turn_helix, Deoxyribose operon repressor SSA_2328 SM01134 SSA_2328 SSA_2348 SM00849 Metallo-beta-lactamase superfamily SSA_2350 SM00363 S4 RNA-binding domain SSA_2350 SM01390 SSA_2350 SSA_2351 SM00382 ATPases associated with a variety of cellular activities SSA_2359 SM01228 SSA_2359 SSA_2364 SM00257 Lysin motif SSA_2366 SM00382 ATPases associated with a variety of cellular activities SSA_2367 SM00382 ATPases associated with a variety of cellular activities SSA_2374 SM00116 Domain in cystathionine beta-synthase and other proteins. SSA_2374 SM01240 SSA_2374 SSA_2378 SM00448 cheY-homologous receiver domain SSA_2378 SM00850 LytTr DNA-binding domain SSA_2381 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SSA_2382 SM00470 ParB-like nuclease domain SSA_2387 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSA_2389 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSA_2393 SM00530 Helix-turn-helix XRE-family like proteins