##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM1420v1
#!genome-build-accession NCBI_Assembly:GCF_000014205.1
##sequence-region NC_009009.1 1 2388435
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=388919
NC_009009.1	RefSeq	region	1	2388435	.	+	.	ID=id0;Dbxref=taxon:388919;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=SK36
NC_009009.1	RefSeq	gene	214	1566	.	+	.	ID=gene0;Dbxref=GeneID:4807412;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SSA_0001
NC_009009.1	RefSeq	CDS	214	1566	.	+	0	ID=cds0;Parent=gene0;Dbxref=Genbank:YP_001034021.1,GeneID:4807412;Name=YP_001034021.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiation protein;protein_id=YP_001034021.1;transl_table=11
NC_009009.1	RefSeq	gene	1725	2861	.	+	.	ID=gene1;Dbxref=GeneID:4807815;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SSA_0002
NC_009009.1	RefSeq	CDS	1725	2861	.	+	0	ID=cds1;Parent=gene1;Dbxref=Genbank:YP_001034022.1,GeneID:4807815;Name=YP_001034022.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=YP_001034022.1;transl_table=11
NC_009009.1	RefSeq	gene	2989	3183	.	+	.	ID=gene2;Dbxref=GeneID:4806949;Name=SSA_2390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2390
NC_009009.1	RefSeq	CDS	2989	3183	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:YP_001034023.1,GeneID:4806949;Name=YP_001034023.1;Note=GC: 38.46%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034023.1;transl_table=11
NC_009009.1	RefSeq	gene	3303	3794	.	-	.	ID=gene3;Dbxref=GeneID:4806741;Name=SSA_0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0004
NC_009009.1	RefSeq	CDS	3303	3794	.	-	0	ID=cds3;Parent=gene3;Dbxref=Genbank:YP_001034024.1,GeneID:4806741;Name=YP_001034024.1;Note=GC: 33.13%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.811. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=lipoprotein;protein_id=YP_001034024.1;transl_table=11
NC_009009.1	RefSeq	gene	3961	5076	.	+	.	ID=gene4;Dbxref=GeneID:4806806;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=SSA_0005
NC_009009.1	RefSeq	CDS	3961	5076	.	+	0	ID=cds4;Parent=gene4;Dbxref=Genbank:YP_001034025.1,GeneID:4806806;Name=YP_001034025.1;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=YP_001034025.1;transl_table=11
NC_009009.1	RefSeq	gene	5149	5718	.	+	.	ID=gene5;Dbxref=GeneID:4806199;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=SSA_0006
NC_009009.1	RefSeq	CDS	5149	5718	.	+	0	ID=cds5;Parent=gene5;Dbxref=Genbank:YP_001034026.1,GeneID:4806199;Name=YP_001034026.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=YP_001034026.1;transl_table=11
NC_009009.1	RefSeq	gene	5711	9214	.	+	.	ID=gene6;Dbxref=GeneID:4806337;Name=trcF;gbkey=Gene;gene=trcF;gene_biotype=protein_coding;locus_tag=SSA_0008
NC_009009.1	RefSeq	CDS	5711	9214	.	+	0	ID=cds6;Parent=gene6;Dbxref=Genbank:YP_001034027.1,GeneID:4806337;Name=YP_001034027.1;Note=GC: 36.87%25%3B Codon Adaptation Index (CAI): 0.788. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=trcF;product=transcription-repair coupling factor;protein_id=YP_001034027.1;transl_table=11
NC_009009.1	RefSeq	gene	9305	9571	.	+	.	ID=gene7;Dbxref=GeneID:4806683;Name=SSA_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0009
NC_009009.1	RefSeq	CDS	9305	9571	.	+	0	ID=cds7;Parent=gene7;Dbxref=Genbank:YP_001034028.1,GeneID:4806683;Name=YP_001034028.1;Note=GC: 38.58%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;product=ribosome-associated heat shock protein (S4);protein_id=YP_001034028.1;transl_table=11
NC_009009.1	RefSeq	gene	9564	9932	.	+	.	ID=gene8;Dbxref=GeneID:4806487;Name=divIC;gbkey=Gene;gene=divIC;gene_biotype=protein_coding;locus_tag=SSA_0010
NC_009009.1	RefSeq	CDS	9564	9932	.	+	0	ID=cds8;Parent=gene8;Dbxref=Genbank:YP_001034029.1,GeneID:4806487;Name=YP_001034029.1;Note=GC: 38.48%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.823. Curator(s): J. Alves;gbkey=CDS;gene=divIC;product=cell division protein DivIC;protein_id=YP_001034029.1;transl_table=11
NC_009009.1	RefSeq	gene	9935	10063	.	+	.	ID=gene9;Dbxref=GeneID:4806151;Name=SSA_0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0011
NC_009009.1	RefSeq	CDS	9935	10063	.	+	0	ID=cds9;Parent=gene9;Dbxref=Genbank:YP_001034030.1,GeneID:4806151;Name=YP_001034030.1;Note=GC: 32.56%25%3B Codon Adaptation Index (CAI): 0.794. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034030.1;transl_table=11
NC_009009.1	RefSeq	gene	10056	11339	.	+	.	ID=gene10;Dbxref=GeneID:4806501;Name=SSA_0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0012
NC_009009.1	RefSeq	CDS	10056	11339	.	+	0	ID=cds10;Parent=gene10;Dbxref=Genbank:YP_001034031.1,GeneID:4806501;Name=YP_001034031.1;Note=GC: 37.54%25%3B Codon Adaptation Index (CAI): 0.812. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.979)%3B Curator(s): J. Alves;gbkey=CDS;product=Beta-lactamase class A;protein_id=YP_001034031.1;transl_table=11
NC_009009.1	RefSeq	gene	11336	12613	.	+	.	ID=gene11;Dbxref=GeneID:4806716;Name=mesJ;gbkey=Gene;gene=mesJ;gene_biotype=protein_coding;locus_tag=SSA_0013
NC_009009.1	RefSeq	CDS	11336	12613	.	+	0	ID=cds11;Parent=gene11;Dbxref=Genbank:YP_001034032.1,GeneID:4806716;Name=YP_001034032.1;Note=GC: 38.11%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): J. Alves;gbkey=CDS;gene=mesJ;product=PP family ATPase;protein_id=YP_001034032.1;transl_table=11
NC_009009.1	RefSeq	gene	12606	13160	.	+	.	ID=gene12;Dbxref=GeneID:4805773;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=SSA_0014
NC_009009.1	RefSeq	CDS	12606	13160	.	+	0	ID=cds12;Parent=gene12;Dbxref=Genbank:YP_001034033.1,GeneID:4805773;Name=YP_001034033.1;Note=GC: 32.79%25%3B Codon Adaptation Index (CAI): 0.846. Curator(s): J. Alves;gbkey=CDS;gene=hpt;product=hypoxanthine guanine phosphoribosyltransferase;protein_id=YP_001034033.1;transl_table=11
NC_009009.1	RefSeq	gene	13178	15157	.	+	.	ID=gene13;Dbxref=GeneID:4806676;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=SSA_0015
NC_009009.1	RefSeq	CDS	13178	15157	.	+	0	ID=cds13;Parent=gene13;Dbxref=Genbank:YP_001034034.1,GeneID:4806676;Name=YP_001034034.1;Note=GC: 41.72%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.818. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.458)%3B Curator(s): J. Alves;gbkey=CDS;gene=ftsH;product=membrane ATPase FtsH;protein_id=YP_001034034.1;transl_table=11
NC_009009.1	RefSeq	gene	15263	15334	.	+	.	ID=gene14;Dbxref=GeneID:4806577;Name=SSA_2412;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2412
NC_009009.1	RefSeq	tRNA	15263	15334	.	+	.	ID=rna0;Parent=gene14;Dbxref=GeneID:4806577;gbkey=tRNA;product=tRNA-Glu
NC_009009.1	RefSeq	exon	15263	15334	.	+	.	ID=id1;Parent=rna0;Dbxref=GeneID:4806577;gbkey=tRNA;product=tRNA-Glu
NC_009009.1	RefSeq	gene	15340	15416	.	+	.	ID=gene15;Dbxref=GeneID:4806604;Name=SSA_2413;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2413
NC_009009.1	RefSeq	tRNA	15340	15416	.	+	.	ID=rna1;Parent=gene15;Dbxref=GeneID:4806604;gbkey=tRNA;product=tRNA-Asn
NC_009009.1	RefSeq	exon	15340	15416	.	+	.	ID=id2;Parent=rna1;Dbxref=GeneID:4806604;gbkey=tRNA;product=tRNA-Asn
NC_009009.1	RefSeq	gene	15627	16112	.	+	.	ID=gene16;Dbxref=GeneID:4806630;Name=comX;gbkey=Gene;gene=comX;gene_biotype=protein_coding;locus_tag=SSA_0016
NC_009009.1	RefSeq	CDS	15627	16112	.	+	0	ID=cds14;Parent=gene16;Dbxref=Genbank:YP_001034035.1,GeneID:4806630;Name=YP_001034035.1;Note=GC: 32.72%25%3B Codon Adaptation Index (CAI): 0.803. Curator(s): J. Alves;gbkey=CDS;gene=comX;product=ComX1%2C transcriptional regulator of competence-specific genes;protein_id=YP_001034035.1;transl_table=11
NC_009009.1	RefSeq	gene	16379	17929	.	+	.	ID=gene17;Dbxref=GeneID:4806210;Name=SSA_2400;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2400
NC_009009.1	RefSeq	rRNA	16379	17929	.	+	.	ID=rna2;Parent=gene17;Dbxref=GeneID:4806210;Note=rRNA_16S_1;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	exon	16379	17929	.	+	.	ID=id3;Parent=rna2;Dbxref=GeneID:4806210;Note=rRNA_16S_1;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	gene	17991	18063	.	+	.	ID=gene18;Dbxref=GeneID:4806722;Name=SSA_2414;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2414
NC_009009.1	RefSeq	tRNA	17991	18063	.	+	.	ID=rna3;Parent=gene18;Dbxref=GeneID:4806722;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	exon	17991	18063	.	+	.	ID=id4;Parent=rna3;Dbxref=GeneID:4806722;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	gene	18190	21087	.	+	.	ID=gene19;Dbxref=GeneID:4805959;Name=SSA_2404;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2404
NC_009009.1	RefSeq	rRNA	18190	21087	.	+	.	ID=rna4;Parent=gene19;Dbxref=GeneID:4805959;Note=rRNA_23S_1;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	exon	18190	21087	.	+	.	ID=id5;Parent=rna4;Dbxref=GeneID:4805959;Note=rRNA_23S_1;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	gene	21206	21321	.	+	.	ID=gene20;Dbxref=GeneID:4805809;Name=SSA_2408;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2408
NC_009009.1	RefSeq	rRNA	21206	21321	.	+	.	ID=rna5;Parent=gene20;Dbxref=GeneID:4805809;Note=rRNA_5S_1;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	exon	21206	21321	.	+	.	ID=id6;Parent=rna5;Dbxref=GeneID:4805809;Note=rRNA_5S_1;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	gene	21325	21397	.	+	.	ID=gene21;Dbxref=GeneID:4806734;Name=SSA_2415;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2415
NC_009009.1	RefSeq	tRNA	21325	21397	.	+	.	ID=rna6;Parent=gene21;Dbxref=GeneID:4806734;gbkey=tRNA;product=tRNA-Val
NC_009009.1	RefSeq	exon	21325	21397	.	+	.	ID=id7;Parent=rna6;Dbxref=GeneID:4806734;gbkey=tRNA;product=tRNA-Val
NC_009009.1	RefSeq	gene	21414	21486	.	+	.	ID=gene22;Dbxref=GeneID:4805898;Name=SSA_2416;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2416
NC_009009.1	RefSeq	tRNA	21414	21486	.	+	.	ID=rna7;Parent=gene22;Dbxref=GeneID:4805898;gbkey=tRNA;product=tRNA-Asp
NC_009009.1	RefSeq	exon	21414	21486	.	+	.	ID=id8;Parent=rna7;Dbxref=GeneID:4805898;gbkey=tRNA;product=tRNA-Asp
NC_009009.1	RefSeq	gene	21519	21591	.	+	.	ID=gene23;Dbxref=GeneID:4806475;Name=SSA_2417;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2417
NC_009009.1	RefSeq	tRNA	21519	21591	.	+	.	ID=rna8;Parent=gene23;Dbxref=GeneID:4806475;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	exon	21519	21591	.	+	.	ID=id9;Parent=rna8;Dbxref=GeneID:4806475;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	gene	21597	21678	.	+	.	ID=gene24;Dbxref=GeneID:4807686;Name=SSA_2418;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2418
NC_009009.1	RefSeq	tRNA	21597	21678	.	+	.	ID=rna9;Parent=gene24;Dbxref=GeneID:4807686;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	21597	21678	.	+	.	ID=id10;Parent=rna9;Dbxref=GeneID:4807686;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	21695	21767	.	+	.	ID=gene25;Dbxref=GeneID:4806035;Name=SSA_2419;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2419
NC_009009.1	RefSeq	tRNA	21695	21767	.	+	.	ID=rna10;Parent=gene25;Dbxref=GeneID:4806035;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	exon	21695	21767	.	+	.	ID=id11;Parent=rna10;Dbxref=GeneID:4806035;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	gene	21782	21853	.	+	.	ID=gene26;Dbxref=GeneID:4807481;Name=SSA_2420;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2420
NC_009009.1	RefSeq	tRNA	21782	21853	.	+	.	ID=rna11;Parent=gene26;Dbxref=GeneID:4807481;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	exon	21782	21853	.	+	.	ID=id12;Parent=rna11;Dbxref=GeneID:4807481;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	gene	21861	21946	.	+	.	ID=gene27;Dbxref=GeneID:4807534;Name=SSA_2421;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2421
NC_009009.1	RefSeq	tRNA	21861	21946	.	+	.	ID=rna12;Parent=gene27;Dbxref=GeneID:4807534;Note=tRNA-Leu_2;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	21861	21946	.	+	.	ID=id13;Parent=rna12;Dbxref=GeneID:4807534;Note=tRNA-Leu_2;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	21978	22051	.	+	.	ID=gene28;Dbxref=GeneID:4807688;Name=SSA_2422;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2422
NC_009009.1	RefSeq	tRNA	21978	22051	.	+	.	ID=rna13;Parent=gene28;Dbxref=GeneID:4807688;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	exon	21978	22051	.	+	.	ID=id14;Parent=rna13;Dbxref=GeneID:4807688;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	gene	22071	22144	.	+	.	ID=gene29;Dbxref=GeneID:4806612;Name=SSA_2423;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2423
NC_009009.1	RefSeq	tRNA	22071	22144	.	+	.	ID=rna14;Parent=gene29;Dbxref=GeneID:4806612;gbkey=tRNA;product=tRNA-Pro
NC_009009.1	RefSeq	exon	22071	22144	.	+	.	ID=id15;Parent=rna14;Dbxref=GeneID:4806612;gbkey=tRNA;product=tRNA-Pro
NC_009009.1	RefSeq	gene	22150	22223	.	+	.	ID=gene30;Dbxref=GeneID:4806457;Name=SSA_2424;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2424
NC_009009.1	RefSeq	tRNA	22150	22223	.	+	.	ID=rna15;Parent=gene30;Dbxref=GeneID:4806457;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	exon	22150	22223	.	+	.	ID=id16;Parent=rna15;Dbxref=GeneID:4806457;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	gene	22237	22310	.	+	.	ID=gene31;Dbxref=GeneID:4806781;Name=SSA_2425;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2425
NC_009009.1	RefSeq	tRNA	22237	22310	.	+	.	ID=rna16;Parent=gene31;Dbxref=GeneID:4806781;Note=tRNA-Met_2;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	exon	22237	22310	.	+	.	ID=id17;Parent=rna16;Dbxref=GeneID:4806781;Note=tRNA-Met_2;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	gene	22323	22412	.	+	.	ID=gene32;Dbxref=GeneID:4806405;Name=SSA_2426;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2426
NC_009009.1	RefSeq	tRNA	22323	22412	.	+	.	ID=rna17;Parent=gene32;Dbxref=GeneID:4806405;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	exon	22323	22412	.	+	.	ID=id18;Parent=rna17;Dbxref=GeneID:4806405;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	gene	22432	22505	.	+	.	ID=gene33;Dbxref=GeneID:4806259;Name=SSA_2427;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2427
NC_009009.1	RefSeq	tRNA	22432	22505	.	+	.	ID=rna18;Parent=gene33;Dbxref=GeneID:4806259;Note=tRNA-Met_3;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	exon	22432	22505	.	+	.	ID=id19;Parent=rna18;Dbxref=GeneID:4806259;Note=tRNA-Met_3;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	gene	22511	22583	.	+	.	ID=gene34;Dbxref=GeneID:4806742;Name=SSA_2428;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2428
NC_009009.1	RefSeq	tRNA	22511	22583	.	+	.	ID=rna19;Parent=gene34;Dbxref=GeneID:4806742;gbkey=tRNA;product=tRNA-Phe
NC_009009.1	RefSeq	exon	22511	22583	.	+	.	ID=id20;Parent=rna19;Dbxref=GeneID:4806742;gbkey=tRNA;product=tRNA-Phe
NC_009009.1	RefSeq	gene	22604	22674	.	+	.	ID=gene35;Dbxref=GeneID:4806394;Name=SSA_2429;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2429
NC_009009.1	RefSeq	tRNA	22604	22674	.	+	.	ID=rna20;Parent=gene35;Dbxref=GeneID:4806394;Note=tRNA-Gly_2;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	exon	22604	22674	.	+	.	ID=id21;Parent=rna20;Dbxref=GeneID:4806394;Note=tRNA-Gly_2;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	gene	22708	22781	.	+	.	ID=gene36;Dbxref=GeneID:4806765;Name=SSA_2430;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2430
NC_009009.1	RefSeq	tRNA	22708	22781	.	+	.	ID=rna21;Parent=gene36;Dbxref=GeneID:4806765;gbkey=tRNA;product=tRNA-Ile
NC_009009.1	RefSeq	exon	22708	22781	.	+	.	ID=id22;Parent=rna21;Dbxref=GeneID:4806765;gbkey=tRNA;product=tRNA-Ile
NC_009009.1	RefSeq	gene	22791	22878	.	+	.	ID=gene37;Dbxref=GeneID:4805790;Name=SSA_2431;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2431
NC_009009.1	RefSeq	tRNA	22791	22878	.	+	.	ID=rna22;Parent=gene37;Dbxref=GeneID:4805790;Note=tRNA-Ser_2;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	exon	22791	22878	.	+	.	ID=id23;Parent=rna22;Dbxref=GeneID:4805790;Note=tRNA-Ser_2;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	gene	22951	23766	.	+	.	ID=gene38;Dbxref=GeneID:4805879;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=SSA_0017
NC_009009.1	RefSeq	CDS	22951	23766	.	+	0	ID=cds15;Parent=gene38;Dbxref=Genbank:YP_001034036.1,GeneID:4805879;Name=YP_001034036.1;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=YP_001034036.1;transl_table=11
NC_009009.1	RefSeq	gene	23768	24268	.	+	.	ID=gene39;Dbxref=GeneID:4807655;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=SSA_0018
NC_009009.1	RefSeq	CDS	23768	24268	.	+	0	ID=cds16;Parent=gene39;Dbxref=Genbank:YP_001034037.1,GeneID:4807655;Name=YP_001034037.1;Note=GC: 30.74%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves;gbkey=CDS;gene=mreD;product=cell-shape determining protein MreD;protein_id=YP_001034037.1;transl_table=11
NC_009009.1	RefSeq	gene	24365	25579	.	+	.	ID=gene40;Dbxref=GeneID:4806506;Name=pcsB;gbkey=Gene;gene=pcsB;gene_biotype=protein_coding;locus_tag=SSA_0019
NC_009009.1	RefSeq	CDS	24365	25579	.	+	0	ID=cds17;Parent=gene40;Dbxref=Genbank:YP_001034038.1,GeneID:4806506;Name=YP_001034038.1;Note=GC: 42.63%25%3B Codon Adaptation Index (CAI): 0.794. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;gene=pcsB;product=secreted antigen GbpB/SagA%3B peptidoglycan hydrolase%3B PcsB protein;protein_id=YP_001034038.1;transl_table=11
NC_009009.1	RefSeq	gene	25704	26669	.	+	.	ID=gene41;Dbxref=GeneID:4807349;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=SSA_0020
NC_009009.1	RefSeq	CDS	25704	26669	.	+	0	ID=cds18;Parent=gene41;Dbxref=Genbank:YP_001034039.1,GeneID:4807349;Name=YP_001034039.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;gene=prsA;product=ribose-phosphate pyrophosphokinase;protein_id=YP_001034039.1;transl_table=11
NC_009009.1	RefSeq	gene	26982	27551	.	+	.	ID=gene42;Dbxref=GeneID:4806989;Name=SSA_0021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0021
NC_009009.1	RefSeq	CDS	26982	27551	.	+	0	ID=cds19;Parent=gene42;Dbxref=Genbank:YP_001034040.1,GeneID:4806989;Name=YP_001034040.1;Note=GC: 44.21%25%3B Codon Adaptation Index (CAI): 0.781. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034040.1;transl_table=11
NC_009009.1	RefSeq	gene	27646	28488	.	+	.	ID=gene43;Dbxref=GeneID:4807000;Name=srtB;gbkey=Gene;gene=srtB;gene_biotype=protein_coding;locus_tag=SSA_0022
NC_009009.1	RefSeq	CDS	27646	28488	.	+	0	ID=cds20;Parent=gene43;Dbxref=Genbank:YP_001034041.1,GeneID:4807000;Name=YP_001034041.1;Note=GC: 42.94%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.795. SignalP prediction: Yes (prob. 0.991)%3B Curator(s): J. Alves;gbkey=CDS;gene=srtB;product=surface protein cell wall anchor;protein_id=YP_001034041.1;transl_table=11
NC_009009.1	RefSeq	gene	28669	29841	.	+	.	ID=gene44;Dbxref=GeneID:4806991;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=SSA_0023
NC_009009.1	RefSeq	CDS	28669	29841	.	+	0	ID=cds21;Parent=gene44;Dbxref=Genbank:YP_001034042.1,GeneID:4806991;Name=YP_001034042.1;Note=catalyzes the transamination of the aromatic amino acid forming a ketoacid%3B first step in aromatic amino acid degradation in lactococci;gbkey=CDS;gene=aspC;product=aromatic amino acid aminotransferase;protein_id=YP_001034042.1;transl_table=11
NC_009009.1	RefSeq	gene	29834	30607	.	+	.	ID=gene45;Dbxref=GeneID:4807070;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SSA_0025
NC_009009.1	RefSeq	CDS	29834	30607	.	+	0	ID=cds22;Parent=gene45;Dbxref=Genbank:YP_001034043.1,GeneID:4807070;Name=YP_001034043.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=YP_001034043.1;transl_table=11
NC_009009.1	RefSeq	gene	30613	31611	.	+	.	ID=gene46;Dbxref=GeneID:4806933;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=SSA_0026
NC_009009.1	RefSeq	CDS	30613	31611	.	+	0	ID=cds23;Parent=gene46;Dbxref=Genbank:YP_001034044.1,GeneID:4806933;Name=YP_001034044.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;gbkey=CDS;gene=plsX;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=YP_001034044.1;transl_table=11
NC_009009.1	RefSeq	gene	31614	31862	.	+	.	ID=gene47;Dbxref=GeneID:4807055;Name=acp;gbkey=Gene;gene=acp;gene_biotype=protein_coding;locus_tag=SSA_0027
NC_009009.1	RefSeq	CDS	31614	31862	.	+	0	ID=cds24;Parent=gene47;Dbxref=Genbank:YP_001034045.1,GeneID:4807055;Name=YP_001034045.1;Note=GC: 35.34%25%3B Codon Adaptation Index (CAI): 0.87. Curator(s): J. Alves;gbkey=CDS;gene=acp;product=acyl carrier protein;protein_id=YP_001034045.1;transl_table=11
NC_009009.1	RefSeq	gene	32023	32730	.	+	.	ID=gene48;Dbxref=GeneID:4807177;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=SSA_0028
NC_009009.1	RefSeq	CDS	32023	32730	.	+	0	ID=cds25;Parent=gene48;Dbxref=Genbank:YP_001034046.1,GeneID:4807177;Name=YP_001034046.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=YP_001034046.1;transl_table=11
NC_009009.1	RefSeq	gene	32750	36484	.	+	.	ID=gene49;Dbxref=GeneID:4807132;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=SSA_0030
NC_009009.1	RefSeq	CDS	32750	36484	.	+	0	ID=cds26;Parent=gene49;Dbxref=Genbank:YP_001034047.1,GeneID:4807132;Name=YP_001034047.1;Note=GC: 48.7%25%3B Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;gene=purL;product=phosphoribosylformylglycinamidine synthase;protein_id=YP_001034047.1;transl_table=11
NC_009009.1	RefSeq	gene	36579	38018	.	+	.	ID=gene50;Dbxref=GeneID:4807266;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=SSA_0031
NC_009009.1	RefSeq	CDS	36579	38018	.	+	0	ID=cds27;Parent=gene50;Dbxref=Genbank:YP_001034048.1,GeneID:4807266;Name=YP_001034048.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=YP_001034048.1;transl_table=11
NC_009009.1	RefSeq	gene	38078	39100	.	+	.	ID=gene51;Dbxref=GeneID:4807296;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=SSA_0032
NC_009009.1	RefSeq	CDS	38078	39100	.	+	0	ID=cds28;Parent=gene51;Dbxref=Genbank:YP_001034049.1,GeneID:4807296;Name=YP_001034049.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;gene=purM;product=phosphoribosylaminoimidazole synthetase;protein_id=YP_001034049.1;transl_table=11
NC_009009.1	RefSeq	gene	39097	39660	.	+	.	ID=gene52;Dbxref=GeneID:4807782;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SSA_0033
NC_009009.1	RefSeq	CDS	39097	39660	.	+	0	ID=cds29;Parent=gene52;Dbxref=Genbank:YP_001034050.1,GeneID:4807782;Name=YP_001034050.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=YP_001034050.1;transl_table=11
NC_009009.1	RefSeq	gene	39687	40451	.	+	.	ID=gene53;Dbxref=GeneID:4806876;Name=SSA_0034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0034
NC_009009.1	RefSeq	CDS	39687	40451	.	+	0	ID=cds30;Parent=gene53;Dbxref=Genbank:YP_001034051.1,GeneID:4806876;Name=YP_001034051.1;Note=GC: 27.84%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.693. Weakly similar to ribonuclease domain. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034051.1;transl_table=11
NC_009009.1	RefSeq	gene	40455	42017	.	+	.	ID=gene54;Dbxref=GeneID:4807051;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=SSA_0035
NC_009009.1	RefSeq	CDS	40455	42017	.	+	0	ID=cds31;Parent=gene54;Dbxref=Genbank:YP_001034052.1,GeneID:4807051;Name=YP_001034052.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=YP_001034052.1;transl_table=11
NC_009009.1	RefSeq	gene	42140	44089	.	-	.	ID=gene55;Dbxref=GeneID:4807018;Name=SSA_0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0036
NC_009009.1	RefSeq	CDS	42140	44089	.	-	0	ID=cds32;Parent=gene55;Dbxref=Genbank:YP_001034053.1,GeneID:4807018;Name=YP_001034053.1;Note=GC: 45.38%25%3B Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.997)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034053.1;transl_table=11
NC_009009.1	RefSeq	gene	44412	45674	.	+	.	ID=gene56;Dbxref=GeneID:4806862;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=SSA_0037
NC_009009.1	RefSeq	CDS	44412	45674	.	+	0	ID=cds33;Parent=gene56;Dbxref=Genbank:YP_001034054.1,GeneID:4806862;Name=YP_001034054.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=YP_001034054.1;transl_table=11
NC_009009.1	RefSeq	gene	45973	46461	.	+	.	ID=gene57;Dbxref=GeneID:4807083;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SSA_0039
NC_009009.1	RefSeq	CDS	45973	46461	.	+	0	ID=cds34;Parent=gene57;Dbxref=Genbank:YP_001034055.1,GeneID:4807083;Name=YP_001034055.1;Note=GC: 51.12%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): J. Alves;gbkey=CDS;gene=purE;product=phosphoribosylaminoimidazole carboxylase catalytic subunit;protein_id=YP_001034055.1;transl_table=11
NC_009009.1	RefSeq	gene	46448	47539	.	+	.	ID=gene58;Dbxref=GeneID:4807079;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=SSA_0040
NC_009009.1	RefSeq	CDS	46448	47539	.	+	0	ID=cds35;Parent=gene58;Dbxref=Genbank:YP_001034056.1,GeneID:4807079;Name=YP_001034056.1;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purK;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_001034056.1;transl_table=11
NC_009009.1	RefSeq	gene	47802	48029	.	+	.	ID=gene59;Dbxref=GeneID:4807223;Name=SSA_0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0041
NC_009009.1	RefSeq	CDS	47802	48029	.	+	0	ID=cds36;Parent=gene59;Dbxref=Genbank:YP_001034057.1,GeneID:4807223;Name=YP_001034057.1;Note=GC: 39.47%25%3B Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034057.1;transl_table=11
NC_009009.1	RefSeq	gene	48033	48731	.	+	.	ID=gene60;Dbxref=GeneID:4806965;Name=SSA_0042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0042
NC_009009.1	RefSeq	CDS	48033	48731	.	+	0	ID=cds37;Parent=gene60;Dbxref=Genbank:YP_001034058.1,GeneID:4806965;Name=YP_001034058.1;Note=GC: 44.06%25%3B Codon Adaptation Index (CAI): 0.766. Curator(s): J. Alves;gbkey=CDS;product=amino acid recemase;protein_id=YP_001034058.1;transl_table=11
NC_009009.1	RefSeq	gene	48941	49168	.	+	.	ID=gene61;Dbxref=GeneID:4806901;Name=SSA_0043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0043
NC_009009.1	RefSeq	CDS	48941	49168	.	+	0	ID=cds38;Parent=gene61;Dbxref=Genbank:YP_001034059.1,GeneID:4806901;Name=YP_001034059.1;Note=GC: 37.72%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034059.1;transl_table=11
NC_009009.1	RefSeq	gene	49181	50317	.	+	.	ID=gene62;Dbxref=GeneID:4807449;Name=SSA_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0044
NC_009009.1	RefSeq	CDS	49181	50317	.	+	0	ID=cds39;Parent=gene62;Dbxref=Genbank:YP_001034060.1,GeneID:4807449;Name=YP_001034060.1;Note=GC: 29.02%25%3B Codon Adaptation Index (CAI): 0.751. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034060.1;transl_table=11
NC_009009.1	RefSeq	gene	50473	51009	.	+	.	ID=gene63;Dbxref=GeneID:4807577;Name=SSA_0045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0045
NC_009009.1	RefSeq	CDS	50473	51009	.	+	0	ID=cds40;Parent=gene63;Dbxref=Genbank:YP_001034061.1,GeneID:4807577;Name=YP_001034061.1;Note=GC: 27%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.761. SignalP prediction: Yes (prob. 0.467)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034061.1;transl_table=11
NC_009009.1	RefSeq	gene	51034	52329	.	+	.	ID=gene64;Dbxref=GeneID:4807879;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=SSA_0046
NC_009009.1	RefSeq	CDS	51034	52329	.	+	0	ID=cds41;Parent=gene64;Dbxref=Genbank:YP_001034062.1,GeneID:4807879;Name=YP_001034062.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=YP_001034062.1;transl_table=11
NC_009009.1	RefSeq	gene	52374	52940	.	-	.	ID=gene65;Dbxref=GeneID:4807871;Name=SSA_0047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0047
NC_009009.1	RefSeq	CDS	52374	52940	.	-	0	ID=cds42;Parent=gene65;Dbxref=Genbank:YP_001034063.1,GeneID:4807871;Name=YP_001034063.1;Note=GC: 44.44%25%3B Codon Adaptation Index (CAI): 0.795. Curator(s): J. Alves;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=YP_001034063.1;transl_table=11
NC_009009.1	RefSeq	gene	52937	53533	.	-	.	ID=gene66;Dbxref=GeneID:4807840;Name=SSA_0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0048
NC_009009.1	RefSeq	CDS	52937	53533	.	-	0	ID=cds43;Parent=gene66;Dbxref=Genbank:YP_001034064.1,GeneID:4807840;Name=YP_001034064.1;Note=GC: 44.05%25%3B Codon Adaptation Index (CAI): 0.773. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001034064.1;transl_table=11
NC_009009.1	RefSeq	gene	53752	54741	.	+	.	ID=gene67;Dbxref=GeneID:4807641;Name=SSA_0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0049
NC_009009.1	RefSeq	CDS	53752	54741	.	+	0	ID=cds44;Parent=gene67;Dbxref=Genbank:YP_001034065.1,GeneID:4807641;Name=YP_001034065.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaK;protein_id=YP_001034065.1;transl_table=11
NC_009009.1	RefSeq	gene	54752	55330	.	+	.	ID=gene68;Dbxref=GeneID:4807608;Name=SSA_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0050
NC_009009.1	RefSeq	CDS	54752	55330	.	+	0	ID=cds45;Parent=gene68;Dbxref=Genbank:YP_001034066.1,GeneID:4807608;Name=YP_001034066.1;Note=GC: 52.5%25%3B Codon Adaptation Index (CAI): 0.739. Curator(s): J. Alves;gbkey=CDS;product=dihydroxyacetone kinase phosphatase domain-containing protein;protein_id=YP_001034066.1;transl_table=11
NC_009009.1	RefSeq	gene	55330	55704	.	+	.	ID=gene69;Dbxref=GeneID:4807753;Name=SSA_0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0051
NC_009009.1	RefSeq	CDS	55330	55704	.	+	0	ID=cds46;Parent=gene69;Dbxref=Genbank:YP_001034067.1,GeneID:4807753;Name=YP_001034067.1;Note=GC: 49.07%25%3B Codon Adaptation Index (CAI): 0.718. Curator(s): J. Alves;gbkey=CDS;product=PTS system mannnose-specific transporter subunit IIA;protein_id=YP_001034067.1;transl_table=11
NC_009009.1	RefSeq	gene	56032	56748	.	-	.	ID=gene70;Dbxref=GeneID:4807526;Name=SSA_0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0052
NC_009009.1	RefSeq	CDS	56032	56748	.	-	0	ID=cds47;Parent=gene70;Dbxref=Genbank:YP_001034068.1,GeneID:4807526;Name=YP_001034068.1;Note=GC: 42.4%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_001034068.1;transl_table=11
NC_009009.1	RefSeq	gene	56888	58675	.	+	.	ID=gene71;Dbxref=GeneID:4807486;Name=SSA_0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0053
NC_009009.1	RefSeq	CDS	56888	58675	.	+	0	ID=cds48;Parent=gene71;Dbxref=Genbank:YP_001034069.1,GeneID:4807486;Name=YP_001034069.1;Note=GC: 48.1%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): J. Alves;gbkey=CDS;product=beta-galactosidase;protein_id=YP_001034069.1;transl_table=11
NC_009009.1	RefSeq	gene	58672	59148	.	+	.	ID=gene72;Dbxref=GeneID:4807891;Name=SSA_0054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0054
NC_009009.1	RefSeq	CDS	58672	59148	.	+	0	ID=cds49;Parent=gene72;Dbxref=Genbank:YP_001034070.1,GeneID:4807891;Name=YP_001034070.1;Note=GC: 47.59%25%3B Transporter classification TC:4.A.6.1.2. Codon Adaptation Index (CAI): 0.764. Curator(s): J. Alves;gbkey=CDS;product=phosphotransferase system sugar-specific EIIB component;protein_id=YP_001034070.1;transl_table=11
NC_009009.1	RefSeq	gene	59174	60079	.	+	.	ID=gene73;Dbxref=GeneID:4807381;Name=SSA_0055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0055
NC_009009.1	RefSeq	CDS	59174	60079	.	+	0	ID=cds50;Parent=gene73;Dbxref=Genbank:YP_001034071.1,GeneID:4807381;Name=YP_001034071.1;Note=GC: 45.14%25%3B Transporter classification TC:4.A.6.1.2. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.767. Curator(s): J. Alves;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=YP_001034071.1;transl_table=11
NC_009009.1	RefSeq	gene	60066	60890	.	+	.	ID=gene74;Dbxref=GeneID:4807120;Name=SSA_0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0056
NC_009009.1	RefSeq	CDS	60066	60890	.	+	0	ID=cds51;Parent=gene74;Dbxref=Genbank:YP_001034072.1,GeneID:4807120;Name=YP_001034072.1;Note=GC: 42.18%25%3B Transporter classification TC:4.A.6.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.793. Curator(s): J. Alves;gbkey=CDS;product=phosphotransferase system sugar-specific EIID component;protein_id=YP_001034072.1;transl_table=11
NC_009009.1	RefSeq	gene	60902	61306	.	+	.	ID=gene75;Dbxref=GeneID:4807447;Name=SSA_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0057
NC_009009.1	RefSeq	CDS	60902	61306	.	+	0	ID=cds52;Parent=gene75;Dbxref=Genbank:YP_001034073.1,GeneID:4807447;Name=YP_001034073.1;Note=GC: 42.72%25%3B Transporter classification TC:4.A.6.1.2. Codon Adaptation Index (CAI): 0.789. Curator(s): J. Alves;gbkey=CDS;product=phosphotransferase system sugar-specific EII component;protein_id=YP_001034073.1;transl_table=11
NC_009009.1	RefSeq	gene	61617	62795	.	+	.	ID=gene76;Dbxref=GeneID:4807968;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=SSA_0060
NC_009009.1	RefSeq	CDS	61617	62795	.	+	0	ID=cds53;Parent=gene76;Dbxref=Genbank:YP_001034074.1,GeneID:4807968;Name=YP_001034074.1;Note=GC: 49.79%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;gene=agaS;product=tagatose-6-phosphate ketose/aldose isomerase;protein_id=YP_001034074.1;transl_table=11
NC_009009.1	RefSeq	gene	62810	63847	.	+	.	ID=gene77;Dbxref=GeneID:4806574;Name=SSA_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0061
NC_009009.1	RefSeq	CDS	62810	63847	.	+	0	ID=cds54;Parent=gene77;Dbxref=Genbank:YP_001034075.1,GeneID:4806574;Name=YP_001034075.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase%2C encoded by lacD1 and lacD2%3B expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources;gbkey=CDS;product=tagatose 1%2C6-diphosphate aldolase;protein_id=YP_001034075.1;transl_table=11
NC_009009.1	RefSeq	gene	63872	64918	.	+	.	ID=gene78;Dbxref=GeneID:4806696;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=SSA_0062
NC_009009.1	RefSeq	CDS	63872	64918	.	+	0	ID=cds55;Parent=gene78;Dbxref=Genbank:YP_001034076.1,GeneID:4806696;Name=YP_001034076.1;Note=GC: 49.28%25%3B Codon Adaptation Index (CAI): 0.779. Curator(s): J. Alves;gbkey=CDS;gene=galM;product=aldose 1-epimerase;protein_id=YP_001034076.1;transl_table=11
NC_009009.1	RefSeq	gene	65475	66473	.	+	.	ID=gene79;Dbxref=GeneID:4806365;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=SSA_0063
NC_009009.1	RefSeq	CDS	65475	66473	.	+	0	ID=cds56;Parent=gene79;Dbxref=Genbank:YP_001034077.1,GeneID:4806365;Name=YP_001034077.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=YP_001034077.1;transl_table=11
NC_009009.1	RefSeq	gene	66470	67039	.	+	.	ID=gene80;Dbxref=GeneID:4806650;Name=SSA_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0064
NC_009009.1	RefSeq	CDS	66470	67039	.	+	0	ID=cds57;Parent=gene80;Dbxref=Genbank:YP_001034078.1,GeneID:4806650;Name=YP_001034078.1;Note=GC: 45.44%25%3B Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034078.1;transl_table=11
NC_009009.1	RefSeq	gene	67315	67737	.	+	.	ID=gene81;Dbxref=GeneID:4807973;Name=SSA_0065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0065
NC_009009.1	RefSeq	CDS	67315	67737	.	+	0	ID=cds58;Parent=gene81;Dbxref=Genbank:YP_001034079.1,GeneID:4807973;Name=YP_001034079.1;Note=GC: 44.68%25%3B Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves;gbkey=CDS;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=YP_001034079.1;transl_table=11
NC_009009.1	RefSeq	gene	67742	68155	.	+	.	ID=gene82;Dbxref=GeneID:4807654;Name=SSA_0066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0066
NC_009009.1	RefSeq	CDS	67742	68155	.	+	0	ID=cds59;Parent=gene82;Dbxref=Genbank:YP_001034080.1,GeneID:4807654;Name=YP_001034080.1;Note=GC: 44.2%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034080.1;transl_table=11
NC_009009.1	RefSeq	gene	68145	69950	.	+	.	ID=gene83;Dbxref=GeneID:4808054;Name=SSA_0067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0067
NC_009009.1	RefSeq	CDS	68145	69950	.	+	0	ID=cds60;Parent=gene83;Dbxref=Genbank:YP_001034081.1,GeneID:4808054;Name=YP_001034081.1;Note=GC: 45.96%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;product=acyltransferase;protein_id=YP_001034081.1;transl_table=11
NC_009009.1	RefSeq	gene	70254	72908	.	+	.	ID=gene84;Dbxref=GeneID:4808056;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;locus_tag=SSA_0068
NC_009009.1	RefSeq	CDS	70254	72908	.	+	0	ID=cds61;Parent=gene84;Dbxref=Genbank:YP_001034082.1,GeneID:4808056;Name=YP_001034082.1;Note=GC: 45.69%25%3B Codon Adaptation Index (CAI): 0.794. Curator(s): J. Alves;gbkey=CDS;gene=adhE;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=YP_001034082.1;transl_table=11
NC_009009.1	RefSeq	gene	73177	73857	.	+	.	ID=gene85;Dbxref=GeneID:4808101;Name=SSA_0069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0069
NC_009009.1	RefSeq	CDS	73177	73857	.	+	0	ID=cds62;Parent=gene85;Dbxref=Genbank:YP_001034083.1,GeneID:4808101;Name=YP_001034083.1;Note=GC: 46.55%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.723. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034083.1;transl_table=11
NC_009009.1	RefSeq	gene	73973	74974	.	+	.	ID=gene86;Dbxref=GeneID:4807921;Name=axe1;gbkey=Gene;gene=axe1;gene_biotype=protein_coding;locus_tag=SSA_0070
NC_009009.1	RefSeq	CDS	73973	74974	.	+	0	ID=cds63;Parent=gene86;Dbxref=Genbank:YP_001034084.1,GeneID:4807921;Name=YP_001034084.1;Note=GC: 43.81%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): J. Alves;gbkey=CDS;gene=axe1;product=acetylxylan esterase;protein_id=YP_001034084.1;transl_table=11
NC_009009.1	RefSeq	gene	75350	76048	.	+	.	ID=gene87;Dbxref=GeneID:4807828;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=SSA_0071
NC_009009.1	RefSeq	CDS	75350	76048	.	+	0	ID=cds64;Parent=gene87;Dbxref=Genbank:YP_001034085.1,GeneID:4807828;Name=YP_001034085.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;gene=nanE;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=YP_001034085.1;transl_table=11
NC_009009.1	RefSeq	gene	76062	77195	.	+	.	ID=gene88;Dbxref=GeneID:4807545;Name=SSA_0072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0072
NC_009009.1	RefSeq	CDS	76062	77195	.	+	0	ID=cds65;Parent=gene88;Dbxref=Genbank:YP_001034086.1,GeneID:4807545;Name=YP_001034086.1;Note=GC: 42.5%25%3B Transporter classification TC:3.A.1.1.2. Codon Adaptation Index (CAI): 0.776. Curator(s): J. Alves;gbkey=CDS;product=sugar ABC transporter;protein_id=YP_001034086.1;transl_table=11
NC_009009.1	RefSeq	gene	77219	77671	.	+	.	ID=gene89;Dbxref=GeneID:4807499;Name=SSA_0073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0073
NC_009009.1	RefSeq	CDS	77219	77671	.	+	0	ID=cds66;Parent=gene89;Dbxref=Genbank:YP_001034087.1,GeneID:4807499;Name=YP_001034087.1;Note=GC: 31.13%25%3B Codon Adaptation Index (CAI): 0.778. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034087.1;transl_table=11
NC_009009.1	RefSeq	gene	77689	79035	.	+	.	ID=gene90;Dbxref=GeneID:4808097;Name=SSA_0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0074
NC_009009.1	RefSeq	CDS	77689	79035	.	+	0	ID=cds67;Parent=gene90;Dbxref=Genbank:YP_001034088.1,GeneID:4808097;Name=YP_001034088.1;Note=GC: 36.15%25%3B Transporter classification TC:3.A.1.1.21. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.807. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=YP_001034088.1;transl_table=11
NC_009009.1	RefSeq	gene	79103	79987	.	+	.	ID=gene91;Dbxref=GeneID:4807406;Name=SSA_0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0075
NC_009009.1	RefSeq	CDS	79103	79987	.	+	0	ID=cds68;Parent=gene91;Dbxref=Genbank:YP_001034089.1,GeneID:4807406;Name=YP_001034089.1;Note=GC: 37.97%25%3B Transporter classification TC:3.A.1.1.19. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.772. SignalP prediction: Yes (prob. 0.555)%3B Curator(s): J. Alves;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_001034089.1;transl_table=11
NC_009009.1	RefSeq	gene	79987	80820	.	+	.	ID=gene92;Dbxref=GeneID:4806573;Name=SSA_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0076
NC_009009.1	RefSeq	CDS	79987	80820	.	+	0	ID=cds69;Parent=gene92;Dbxref=Genbank:YP_001034090.1,GeneID:4806573;Name=YP_001034090.1;Note=GC: 36.81%25%3B Transporter classification TC:3.A.1.1.17. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.735. Curator(s): J. Alves;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_001034090.1;transl_table=11
NC_009009.1	RefSeq	gene	80878	81981	.	+	.	ID=gene93;Dbxref=GeneID:4806544;Name=SSA_0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0077
NC_009009.1	RefSeq	CDS	80878	81981	.	+	0	ID=cds70;Parent=gene93;Dbxref=Genbank:YP_001034091.1,GeneID:4806544;Name=YP_001034091.1;Note=GC: 39.4%25%3B Codon Adaptation Index (CAI): 0.816. Curator(s): J. Alves;gbkey=CDS;product=oxidoreductase;protein_id=YP_001034091.1;transl_table=11
NC_009009.1	RefSeq	gene	82044	82961	.	+	.	ID=gene94;Dbxref=GeneID:4806817;Name=SSA_0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0078
NC_009009.1	RefSeq	CDS	82044	82961	.	+	0	ID=cds71;Parent=gene94;Dbxref=Genbank:YP_001034092.1,GeneID:4806817;Name=YP_001034092.1;Note=GC: 46.51%25%3B Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=YP_001034092.1;transl_table=11
NC_009009.1	RefSeq	gene	82995	83879	.	+	.	ID=gene95;Dbxref=GeneID:4806739;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=SSA_0079
NC_009009.1	RefSeq	CDS	82995	83879	.	+	0	ID=cds72;Parent=gene95;Dbxref=Genbank:YP_001034093.1,GeneID:4806739;Name=YP_001034093.1;Note=GC: 46.67%25%3B Codon Adaptation Index (CAI): 0.804. Curator(s): J. Alves;gbkey=CDS;gene=glk;product=ROK family protein;protein_id=YP_001034093.1;transl_table=11
NC_009009.1	RefSeq	gene	83925	84254	.	+	.	ID=gene96;Dbxref=GeneID:4805929;Name=blpT;gbkey=Gene;gene=blpT;gene_biotype=protein_coding;locus_tag=SSA_0080
NC_009009.1	RefSeq	CDS	83925	84254	.	+	0	ID=cds73;Parent=gene96;Dbxref=Genbank:YP_001034094.1,GeneID:4805929;Name=YP_001034094.1;Note=GC: 40%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;gene=blpT;product=superfamily I DNA/RNA helicase;protein_id=YP_001034094.1;transl_table=11
NC_009009.1	RefSeq	gene	84310	85161	.	-	.	ID=gene97;Dbxref=GeneID:4808096;Name=SSA_0081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0081
NC_009009.1	RefSeq	CDS	84310	85161	.	-	0	ID=cds74;Parent=gene97;Dbxref=Genbank:YP_001034095.1,GeneID:4808096;Name=YP_001034095.1;Note=GC: 42.72%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=YP_001034095.1;transl_table=11
NC_009009.1	RefSeq	gene	85577	85900	.	+	.	ID=gene98;Dbxref=GeneID:4805776;Name=SSA_0083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0083
NC_009009.1	RefSeq	CDS	85577	85900	.	+	0	ID=cds75;Parent=gene98;Dbxref=Genbank:YP_001034096.1,GeneID:4805776;Name=YP_001034096.1;Note=GC: 49.07%25%3B Codon Adaptation Index (CAI): 0.75. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034096.1;transl_table=11
NC_009009.1	RefSeq	gene	85890	87845	.	+	.	ID=gene99;Dbxref=GeneID:4807323;Name=ntpI;gbkey=Gene;gene=ntpI;gene_biotype=protein_coding;locus_tag=SSA_0085
NC_009009.1	RefSeq	CDS	85890	87845	.	+	0	ID=cds76;Parent=gene99;Dbxref=Genbank:YP_001034097.1,GeneID:4807323;Name=YP_001034097.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.;gbkey=CDS;gene=ntpI;product=V-type ATP synthase subunit I;protein_id=YP_001034097.1;transl_table=11
NC_009009.1	RefSeq	gene	87979	88458	.	+	.	ID=gene100;Dbxref=GeneID:4807653;Name=ntpK;gbkey=Gene;gene=ntpK;gene_biotype=protein_coding;locus_tag=SSA_0086
NC_009009.1	RefSeq	CDS	87979	88458	.	+	0	ID=cds77;Parent=gene100;Dbxref=Genbank:YP_001034098.1,GeneID:4807653;Name=YP_001034098.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits;gbkey=CDS;gene=ntpK;product=V-type ATP synthase subunit K;protein_id=YP_001034098.1;transl_table=11
NC_009009.1	RefSeq	gene	88469	89059	.	+	.	ID=gene101;Dbxref=GeneID:4806364;Name=ntpE;gbkey=Gene;gene=ntpE;gene_biotype=protein_coding;locus_tag=SSA_0087
NC_009009.1	RefSeq	CDS	88469	89059	.	+	0	ID=cds78;Parent=gene101;Dbxref=Genbank:YP_001034099.1,GeneID:4806364;Name=YP_001034099.1;Note=GC: 49.75%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): J. Alves;gbkey=CDS;gene=ntpE;product=V-type sodium ATPase subunit E;protein_id=YP_001034099.1;transl_table=11
NC_009009.1	RefSeq	gene	89070	90083	.	+	.	ID=gene102;Dbxref=GeneID:4807893;Name=ntpC;gbkey=Gene;gene=ntpC;gene_biotype=protein_coding;locus_tag=SSA_0088
NC_009009.1	RefSeq	CDS	89070	90083	.	+	0	ID=cds79;Parent=gene102;Dbxref=Genbank:YP_001034100.1,GeneID:4807893;Name=YP_001034100.1;Note=GC: 50%25%3B Transporter classification TC:3.A.2.2.2. Codon Adaptation Index (CAI): 0.77. Curator(s): J. Alves;gbkey=CDS;gene=ntpC;product=V-type sodium ATPase subunit C;protein_id=YP_001034100.1;transl_table=11
NC_009009.1	RefSeq	gene	90070	90390	.	+	.	ID=gene103;Dbxref=GeneID:4806678;Name=ntpG;gbkey=Gene;gene=ntpG;gene_biotype=protein_coding;locus_tag=SSA_0089
NC_009009.1	RefSeq	CDS	90070	90390	.	+	0	ID=cds80;Parent=gene103;Dbxref=Genbank:YP_001034101.1,GeneID:4806678;Name=YP_001034101.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the F subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=ntpG;product=V-type ATP synthase subunit F;protein_id=YP_001034101.1;transl_table=11
NC_009009.1	RefSeq	gene	90398	91093	.	+	.	ID=gene104;Dbxref=GeneID:4806087;Name=SSA_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0090
NC_009009.1	RefSeq	CDS	90398	91093	.	+	0	ID=cds81;Parent=gene104;Dbxref=Genbank:YP_001034102.1,GeneID:4806087;Name=YP_001034102.1;Note=GC: 48.85%25%3B Codon Adaptation Index (CAI): 0.754. Curator(s): J. Alves;gbkey=CDS;product=acetyltransferase;protein_id=YP_001034102.1;transl_table=11
NC_009009.1	RefSeq	gene	91177	93048	.	+	.	ID=gene105;Dbxref=GeneID:4806981;Name=ntpA;gbkey=Gene;gene=ntpA;gene_biotype=protein_coding;locus_tag=SSA_0091
NC_009009.1	RefSeq	CDS	91177	93048	.	+	0	ID=cds82;Parent=gene105;Dbxref=Genbank:YP_001034103.1,GeneID:4806981;Name=YP_001034103.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the A subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=ntpA;product=V-type ATP synthase subunit A;protein_id=YP_001034103.1;transl_table=11
NC_009009.1	RefSeq	gene	93035	94429	.	+	.	ID=gene106;Dbxref=GeneID:4807001;Name=ntpB;gbkey=Gene;gene=ntpB;gene_biotype=protein_coding;locus_tag=SSA_0092
NC_009009.1	RefSeq	CDS	93035	94429	.	+	0	ID=cds83;Parent=gene106;Dbxref=Genbank:YP_001034104.1,GeneID:4807001;Name=YP_001034104.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the B subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=ntpB;product=V-type ATP synthase subunit B;protein_id=YP_001034104.1;transl_table=11
NC_009009.1	RefSeq	gene	94426	95049	.	+	.	ID=gene107;Dbxref=GeneID:4807114;Name=ntpD;gbkey=Gene;gene=ntpD;gene_biotype=protein_coding;locus_tag=SSA_0093
NC_009009.1	RefSeq	CDS	94426	95049	.	+	0	ID=cds84;Parent=gene107;Dbxref=Genbank:YP_001034105.1,GeneID:4807114;Name=YP_001034105.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the D subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=ntpD;product=V-type ATP synthase subunit D;protein_id=YP_001034105.1;transl_table=11
NC_009009.1	RefSeq	gene	95485	96582	.	+	.	ID=gene108;Dbxref=GeneID:4807098;Name=SSA_0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0094
NC_009009.1	RefSeq	CDS	95485	96582	.	+	0	ID=cds85;Parent=gene108;Dbxref=Genbank:YP_001034106.1,GeneID:4807098;Name=YP_001034106.1;Note=GC: 45.81%25%3B Codon Adaptation Index (CAI): 0.791. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=cell wall metabolism%2C LysM type protein;protein_id=YP_001034106.1;transl_table=11
NC_009009.1	RefSeq	gene	96695	98179	.	+	.	ID=gene109;Dbxref=GeneID:4806923;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=SSA_0095
NC_009009.1	RefSeq	CDS	96695	98179	.	+	0	ID=cds86;Parent=gene109;Dbxref=Genbank:YP_001034107.1,GeneID:4806923;Name=YP_001034107.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=YP_001034107.1;transl_table=11
NC_009009.1	RefSeq	gene	98288	99565	.	+	.	ID=gene110;Dbxref=GeneID:4807205;Name=norN;gbkey=Gene;gene=norN;gene_biotype=protein_coding;locus_tag=SSA_0097
NC_009009.1	RefSeq	CDS	98288	99565	.	+	0	ID=cds87;Parent=gene110;Dbxref=Genbank:YP_001034108.1,GeneID:4807205;Name=YP_001034108.1;Note=GC: 51.64%25%3B Transporter classification TC:2.A.66.1.10. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.747. Curator(s): J. Alves;gbkey=CDS;gene=norN;product=MATE family transporter;protein_id=YP_001034108.1;transl_table=11
NC_009009.1	RefSeq	gene	99562	100176	.	+	.	ID=gene111;Dbxref=GeneID:4807174;Name=SSA_0098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0098
NC_009009.1	RefSeq	CDS	99562	100176	.	+	0	ID=cds88;Parent=gene111;Dbxref=Genbank:YP_001034109.1,GeneID:4807174;Name=YP_001034109.1;Note=GC: 45.85%25%3B Codon Adaptation Index (CAI): 0.744. Curator(s): J. Alves;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=YP_001034109.1;transl_table=11
NC_009009.1	RefSeq	gene	100224	100709	.	-	.	ID=gene112;Dbxref=GeneID:4807167;Name=SSA_0099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0099
NC_009009.1	RefSeq	CDS	100224	100709	.	-	0	ID=cds89;Parent=gene112;Dbxref=Genbank:YP_001034110.1,GeneID:4807167;Name=YP_001034110.1;Note=GC: 35.39%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.753. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034110.1;transl_table=11
NC_009009.1	RefSeq	gene	100820	103462	.	+	.	ID=gene113;Dbxref=GeneID:4807265;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=SSA_0100
NC_009009.1	RefSeq	CDS	100820	103462	.	+	0	ID=cds90;Parent=gene113;Dbxref=Genbank:YP_001034111.1,GeneID:4807265;Name=YP_001034111.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=YP_001034111.1;transl_table=11
NC_009009.1	RefSeq	gene	103736	104173	.	+	.	ID=gene114;Dbxref=GeneID:4807258;Name=SSA_0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0101
NC_009009.1	RefSeq	CDS	103736	104173	.	+	0	ID=cds91;Parent=gene114;Dbxref=Genbank:YP_001034112.1,GeneID:4807258;Name=YP_001034112.1;Note=GC: 48.17%25%3B Codon Adaptation Index (CAI): 0.81. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034112.1;transl_table=11
NC_009009.1	RefSeq	gene	104175	104687	.	+	.	ID=gene115;Dbxref=GeneID:4806898;Name=SSA_0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0102
NC_009009.1	RefSeq	CDS	104175	104687	.	+	0	ID=cds92;Parent=gene115;Dbxref=Genbank:YP_001034113.1,GeneID:4806898;Name=YP_001034113.1;Note=GC: 46.78%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034113.1;transl_table=11
NC_009009.1	RefSeq	gene	104720	105580	.	-	.	ID=gene116;Dbxref=GeneID:4806877;Name=SSA_0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0103
NC_009009.1	RefSeq	CDS	104720	105580	.	-	0	ID=cds93;Parent=gene116;Dbxref=Genbank:YP_001034114.1,GeneID:4806877;Name=YP_001034114.1;Note=GC: 42.28%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.727. SignalP prediction: Yes (prob. 0.47)%3B Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034114.1;transl_table=11
NC_009009.1	RefSeq	gene	105733	106875	.	+	.	ID=gene117;Dbxref=GeneID:4807049;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=SSA_0104
NC_009009.1	RefSeq	CDS	105733	106875	.	+	0	ID=cds94;Parent=gene117;Dbxref=Genbank:YP_001034115.1,GeneID:4807049;Name=YP_001034115.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=YP_001034115.1;transl_table=11
NC_009009.1	RefSeq	gene	106901	107539	.	+	.	ID=gene118;Dbxref=GeneID:4808019;Name=SSA_0105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0105
NC_009009.1	RefSeq	CDS	106901	107539	.	+	0	ID=cds95;Parent=gene118;Dbxref=Genbank:YP_001034116.1,GeneID:4808019;Name=YP_001034116.1;Note=GC: 47.26%25%3B Codon Adaptation Index (CAI): 0.723. Curator(s): M. Serrano;gbkey=CDS;product=uridine kinase;protein_id=YP_001034116.1;transl_table=11
NC_009009.1	RefSeq	gene	107912	108220	.	+	.	ID=gene119;Dbxref=GeneID:4806854;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=SSA_0106
NC_009009.1	RefSeq	CDS	107912	108220	.	+	0	ID=cds96;Parent=gene119;Dbxref=Genbank:YP_001034117.1,GeneID:4806854;Name=YP_001034117.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=YP_001034117.1;transl_table=11
NC_009009.1	RefSeq	gene	108305	108931	.	+	.	ID=gene120;Dbxref=GeneID:4806940;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=SSA_0107
NC_009009.1	RefSeq	CDS	108305	108931	.	+	0	ID=cds97;Parent=gene120;Dbxref=Genbank:YP_001034118.1,GeneID:4806940;Name=YP_001034118.1;Note=binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=YP_001034118.1;transl_table=11
NC_009009.1	RefSeq	gene	108956	109579	.	+	.	ID=gene121;Dbxref=GeneID:4807241;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SSA_0108
NC_009009.1	RefSeq	CDS	108956	109579	.	+	0	ID=cds98;Parent=gene121;Dbxref=Genbank:YP_001034119.1,GeneID:4807241;Name=YP_001034119.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=YP_001034119.1;transl_table=11
NC_009009.1	RefSeq	gene	109579	109875	.	+	.	ID=gene122;Dbxref=GeneID:4807229;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SSA_0109
NC_009009.1	RefSeq	CDS	109579	109875	.	+	0	ID=cds99;Parent=gene122;Dbxref=Genbank:YP_001034120.1,GeneID:4807229;Name=YP_001034120.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=YP_001034120.1;transl_table=11
NC_009009.1	RefSeq	gene	109893	110726	.	+	.	ID=gene123;Dbxref=GeneID:4806961;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=SSA_0110
NC_009009.1	RefSeq	CDS	109893	110726	.	+	0	ID=cds100;Parent=gene123;Dbxref=Genbank:YP_001034121.1,GeneID:4806961;Name=YP_001034121.1;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;gbkey=CDS;gene=rplB;product=50S ribosomal protein L2;protein_id=YP_001034121.1;transl_table=11
NC_009009.1	RefSeq	gene	110812	111093	.	+	.	ID=gene124;Dbxref=GeneID:4806904;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=SSA_0111
NC_009009.1	RefSeq	CDS	110812	111093	.	+	0	ID=cds101;Parent=gene124;Dbxref=Genbank:YP_001034122.1,GeneID:4806904;Name=YP_001034122.1;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=YP_001034122.1;transl_table=11
NC_009009.1	RefSeq	gene	111105	111449	.	+	.	ID=gene125;Dbxref=GeneID:4807615;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=SSA_0112
NC_009009.1	RefSeq	CDS	111105	111449	.	+	0	ID=cds102;Parent=gene125;Dbxref=Genbank:YP_001034123.1,GeneID:4807615;Name=YP_001034123.1;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=YP_001034123.1;transl_table=11
NC_009009.1	RefSeq	gene	111462	112115	.	+	.	ID=gene126;Dbxref=GeneID:4807537;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=SSA_0113
NC_009009.1	RefSeq	CDS	111462	112115	.	+	0	ID=cds103;Parent=gene126;Dbxref=Genbank:YP_001034124.1,GeneID:4807537;Name=YP_001034124.1;Note=forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=YP_001034124.1;transl_table=11
NC_009009.1	RefSeq	gene	112119	112532	.	+	.	ID=gene127;Dbxref=GeneID:4807756;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=SSA_0114
NC_009009.1	RefSeq	CDS	112119	112532	.	+	0	ID=cds104;Parent=gene127;Dbxref=Genbank:YP_001034125.1,GeneID:4807756;Name=YP_001034125.1;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=YP_001034125.1;transl_table=11
NC_009009.1	RefSeq	gene	112542	112748	.	+	.	ID=gene128;Dbxref=GeneID:4807556;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=SSA_0115
NC_009009.1	RefSeq	CDS	112542	112748	.	+	0	ID=cds105;Parent=gene128;Dbxref=Genbank:YP_001034126.1,GeneID:4807556;Name=YP_001034126.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=YP_001034126.1;transl_table=11
NC_009009.1	RefSeq	gene	112772	113032	.	+	.	ID=gene129;Dbxref=GeneID:4807624;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=SSA_0116
NC_009009.1	RefSeq	CDS	112772	113032	.	+	0	ID=cds106;Parent=gene129;Dbxref=Genbank:YP_001034127.1,GeneID:4807624;Name=YP_001034127.1;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=YP_001034127.1;transl_table=11
NC_009009.1	RefSeq	gene	113058	113426	.	+	.	ID=gene130;Dbxref=GeneID:4807570;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=SSA_0117
NC_009009.1	RefSeq	CDS	113058	113426	.	+	0	ID=cds107;Parent=gene130;Dbxref=Genbank:YP_001034128.1,GeneID:4807570;Name=YP_001034128.1;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=YP_001034128.1;transl_table=11
NC_009009.1	RefSeq	gene	113503	113808	.	+	.	ID=gene131;Dbxref=GeneID:4807943;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=SSA_0118
NC_009009.1	RefSeq	CDS	113503	113808	.	+	0	ID=cds108;Parent=gene131;Dbxref=Genbank:YP_001034129.1,GeneID:4807943;Name=YP_001034129.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=YP_001034129.1;transl_table=11
NC_009009.1	RefSeq	gene	113832	114374	.	+	.	ID=gene132;Dbxref=GeneID:4807532;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=SSA_0119
NC_009009.1	RefSeq	CDS	113832	114374	.	+	0	ID=cds109;Parent=gene132;Dbxref=Genbank:YP_001034130.1,GeneID:4807532;Name=YP_001034130.1;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=YP_001034130.1;transl_table=11
NC_009009.1	RefSeq	gene	114392	114577	.	+	.	ID=gene133;Dbxref=GeneID:4807279;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SSA_2391
NC_009009.1	RefSeq	CDS	114392	114577	.	+	0	ID=cds110;Parent=gene133;Dbxref=Genbank:YP_001034131.1,GeneID:4807279;Name=YP_001034131.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=YP_001034131.1;transl_table=11
NC_009009.1	RefSeq	gene	114758	115156	.	+	.	ID=gene134;Dbxref=GeneID:4807518;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=SSA_0120
NC_009009.1	RefSeq	CDS	114758	115156	.	+	0	ID=cds111;Parent=gene134;Dbxref=Genbank:YP_001034132.1,GeneID:4807518;Name=YP_001034132.1;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=YP_001034132.1;transl_table=11
NC_009009.1	RefSeq	gene	115323	115502	.	+	.	ID=gene135;Dbxref=GeneID:4807805;Name=SSA_0121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0121
NC_009009.1	RefSeq	CDS	115323	115502	.	+	0	ID=cds112;Parent=gene135;Dbxref=Genbank:YP_001034133.1,GeneID:4807805;Name=YP_001034133.1;Note=GC: 34.44%25%3B Codon Adaptation Index (CAI): 0.837. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034133.1;transl_table=11
NC_009009.1	RefSeq	gene	115567	116103	.	+	.	ID=gene136;Dbxref=GeneID:4808017;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=SSA_0122
NC_009009.1	RefSeq	CDS	115567	116103	.	+	0	ID=cds113;Parent=gene136;Dbxref=Genbank:YP_001034134.1,GeneID:4808017;Name=YP_001034134.1;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=YP_001034134.1;transl_table=11
NC_009009.1	RefSeq	gene	116188	116544	.	+	.	ID=gene137;Dbxref=GeneID:4807995;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=SSA_0123
NC_009009.1	RefSeq	CDS	116188	116544	.	+	0	ID=cds114;Parent=gene137;Dbxref=Genbank:YP_001034135.1,GeneID:4807995;Name=YP_001034135.1;Note=binds 5S rRNA along with protein L5 and L25;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=YP_001034135.1;transl_table=11
NC_009009.1	RefSeq	gene	116562	117056	.	+	.	ID=gene138;Dbxref=GeneID:4806660;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=SSA_0124
NC_009009.1	RefSeq	CDS	116562	117056	.	+	0	ID=cds115;Parent=gene138;Dbxref=Genbank:YP_001034136.1,GeneID:4806660;Name=YP_001034136.1;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=YP_001034136.1;transl_table=11
NC_009009.1	RefSeq	gene	117070	117252	.	+	.	ID=gene139;Dbxref=GeneID:4805990;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SSA_0125
NC_009009.1	RefSeq	CDS	117070	117252	.	+	0	ID=cds116;Parent=gene139;Dbxref=Genbank:YP_001034137.1,GeneID:4805990;Name=YP_001034137.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=YP_001034137.1;transl_table=11
NC_009009.1	RefSeq	gene	117407	117847	.	+	.	ID=gene140;Dbxref=GeneID:4807733;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=SSA_0126
NC_009009.1	RefSeq	CDS	117407	117847	.	+	0	ID=cds117;Parent=gene140;Dbxref=Genbank:YP_001034138.1,GeneID:4807733;Name=YP_001034138.1;Note=late assembly protein;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=YP_001034138.1;transl_table=11
NC_009009.1	RefSeq	gene	117860	119167	.	+	.	ID=gene141;Dbxref=GeneID:4807043;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SSA_0127
NC_009009.1	RefSeq	CDS	117860	119167	.	+	0	ID=cds118;Parent=gene141;Dbxref=Genbank:YP_001034139.1,GeneID:4807043;Name=YP_001034139.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=YP_001034139.1;transl_table=11
NC_009009.1	RefSeq	gene	119341	119979	.	+	.	ID=gene142;Dbxref=GeneID:4806703;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SSA_0128
NC_009009.1	RefSeq	CDS	119341	119979	.	+	0	ID=cds119;Parent=gene142;Dbxref=Genbank:YP_001034140.1,GeneID:4806703;Name=YP_001034140.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=YP_001034140.1;transl_table=11
NC_009009.1	RefSeq	gene	120097	120315	.	+	.	ID=gene143;Dbxref=GeneID:4807106;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=SSA_0129
NC_009009.1	RefSeq	CDS	120097	120315	.	+	0	ID=cds120;Parent=gene143;Dbxref=Genbank:YP_001034141.1,GeneID:4807106;Name=YP_001034141.1;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=YP_001034141.1;transl_table=11
NC_009009.1	RefSeq	gene	120338	120454	.	+	.	ID=gene144;Dbxref=GeneID:4807418;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=SSA_2392
NC_009009.1	RefSeq	CDS	120338	120454	.	+	0	ID=cds121;Parent=gene144;Dbxref=Genbank:YP_001034142.1,GeneID:4807418;Name=YP_001034142.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=YP_001034142.1;transl_table=11
NC_009009.1	RefSeq	gene	120472	120837	.	+	.	ID=gene145;Dbxref=GeneID:4806962;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=SSA_0130
NC_009009.1	RefSeq	CDS	120472	120837	.	+	0	ID=cds122;Parent=gene145;Dbxref=Genbank:YP_001034143.1,GeneID:4806962;Name=YP_001034143.1;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=YP_001034143.1;transl_table=11
NC_009009.1	RefSeq	gene	120857	121240	.	+	.	ID=gene146;Dbxref=GeneID:4807731;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=SSA_0131
NC_009009.1	RefSeq	CDS	120857	121240	.	+	0	ID=cds123;Parent=gene146;Dbxref=Genbank:YP_001034144.1,GeneID:4807731;Name=YP_001034144.1;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=YP_001034144.1;transl_table=11
NC_009009.1	RefSeq	gene	121286	122224	.	+	.	ID=gene147;Dbxref=GeneID:4807466;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=SSA_0132
NC_009009.1	RefSeq	CDS	121286	122224	.	+	0	ID=cds124;Parent=gene147;Dbxref=Genbank:YP_001034145.1,GeneID:4807466;Name=YP_001034145.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_001034145.1;transl_table=11
NC_009009.1	RefSeq	gene	122236	122622	.	+	.	ID=gene148;Dbxref=GeneID:4807664;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SSA_0133
NC_009009.1	RefSeq	CDS	122236	122622	.	+	0	ID=cds125;Parent=gene148;Dbxref=Genbank:YP_001034146.1,GeneID:4807664;Name=YP_001034146.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=YP_001034146.1;transl_table=11
NC_009009.1	RefSeq	gene	124363	125913	.	+	.	ID=gene149;Dbxref=GeneID:4807718;Name=SSA_2401;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2401
NC_009009.1	RefSeq	rRNA	124363	125913	.	+	.	ID=rna23;Parent=gene149;Dbxref=GeneID:4807718;Note=rRNA_16S_2;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	exon	124363	125913	.	+	.	ID=id24;Parent=rna23;Dbxref=GeneID:4807718;Note=rRNA_16S_2;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	gene	125975	126047	.	+	.	ID=gene150;Dbxref=GeneID:4807458;Name=SSA_2432;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2432
NC_009009.1	RefSeq	tRNA	125975	126047	.	+	.	ID=rna24;Parent=gene150;Dbxref=GeneID:4807458;Note=tRNA-Ala_2;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	exon	125975	126047	.	+	.	ID=id25;Parent=rna24;Dbxref=GeneID:4807458;Note=tRNA-Ala_2;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	gene	126174	129073	.	+	.	ID=gene151;Dbxref=GeneID:4807862;Name=SSA_2405;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2405
NC_009009.1	RefSeq	rRNA	126174	129073	.	+	.	ID=rna25;Parent=gene151;Dbxref=GeneID:4807862;Note=rRNA_23S_2;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	exon	126174	129073	.	+	.	ID=id26;Parent=rna25;Dbxref=GeneID:4807862;Note=rRNA_23S_2;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	gene	129192	129307	.	+	.	ID=gene152;Dbxref=GeneID:4807937;Name=SSA_2409;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2409
NC_009009.1	RefSeq	rRNA	129192	129307	.	+	.	ID=rna26;Parent=gene152;Dbxref=GeneID:4807937;Note=rRNA_5S_2;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	exon	129192	129307	.	+	.	ID=id27;Parent=rna26;Dbxref=GeneID:4807937;Note=rRNA_5S_2;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	gene	129311	129383	.	+	.	ID=gene153;Dbxref=GeneID:4807601;Name=SSA_2433;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2433
NC_009009.1	RefSeq	tRNA	129311	129383	.	+	.	ID=rna27;Parent=gene153;Dbxref=GeneID:4807601;Note=tRNA-Val_2;gbkey=tRNA;product=tRNA-Val
NC_009009.1	RefSeq	exon	129311	129383	.	+	.	ID=id28;Parent=rna27;Dbxref=GeneID:4807601;Note=tRNA-Val_2;gbkey=tRNA;product=tRNA-Val
NC_009009.1	RefSeq	gene	129391	129461	.	+	.	ID=gene154;Dbxref=GeneID:4808020;Name=SSA_2434;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2434
NC_009009.1	RefSeq	tRNA	129391	129461	.	+	.	ID=rna28;Parent=gene154;Dbxref=GeneID:4808020;Note=tRNA-Gly_3;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	exon	129391	129461	.	+	.	ID=id29;Parent=rna28;Dbxref=GeneID:4808020;Note=tRNA-Gly_3;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	gene	129495	129568	.	+	.	ID=gene155;Dbxref=GeneID:4807669;Name=SSA_2435;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2435
NC_009009.1	RefSeq	tRNA	129495	129568	.	+	.	ID=rna29;Parent=gene155;Dbxref=GeneID:4807669;Note=tRNA-Ile_2;gbkey=tRNA;product=tRNA-Ile
NC_009009.1	RefSeq	exon	129495	129568	.	+	.	ID=id30;Parent=rna29;Dbxref=GeneID:4807669;Note=tRNA-Ile_2;gbkey=tRNA;product=tRNA-Ile
NC_009009.1	RefSeq	gene	129584	129655	.	+	.	ID=gene156;Dbxref=GeneID:4807935;Name=SSA_2436;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2436
NC_009009.1	RefSeq	tRNA	129584	129655	.	+	.	ID=rna30;Parent=gene156;Dbxref=GeneID:4807935;Note=tRNA-Glu_2;gbkey=tRNA;product=tRNA-Glu
NC_009009.1	RefSeq	exon	129584	129655	.	+	.	ID=id31;Parent=rna30;Dbxref=GeneID:4807935;Note=tRNA-Glu_2;gbkey=tRNA;product=tRNA-Glu
NC_009009.1	RefSeq	gene	129663	129752	.	+	.	ID=gene157;Dbxref=GeneID:4807617;Name=SSA_2437;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2437
NC_009009.1	RefSeq	tRNA	129663	129752	.	+	.	ID=rna31;Parent=gene157;Dbxref=GeneID:4807617;Note=tRNA-Ser_3;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	exon	129663	129752	.	+	.	ID=id32;Parent=rna31;Dbxref=GeneID:4807617;Note=tRNA-Ser_3;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	gene	129772	129845	.	+	.	ID=gene158;Dbxref=GeneID:4807992;Name=SSA_2438;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2438
NC_009009.1	RefSeq	tRNA	129772	129845	.	+	.	ID=rna32;Parent=gene158;Dbxref=GeneID:4807992;Note=tRNA-Met_4;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	exon	129772	129845	.	+	.	ID=id33;Parent=rna32;Dbxref=GeneID:4807992;Note=tRNA-Met_4;gbkey=tRNA;product=tRNA-Met
NC_009009.1	RefSeq	gene	129851	129923	.	+	.	ID=gene159;Dbxref=GeneID:4807372;Name=SSA_2439;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2439
NC_009009.1	RefSeq	tRNA	129851	129923	.	+	.	ID=rna33;Parent=gene159;Dbxref=GeneID:4807372;Note=tRNA-Phe_2;gbkey=tRNA;product=tRNA-Phe
NC_009009.1	RefSeq	exon	129851	129923	.	+	.	ID=id34;Parent=rna33;Dbxref=GeneID:4807372;Note=tRNA-Phe_2;gbkey=tRNA;product=tRNA-Phe
NC_009009.1	RefSeq	gene	129937	130017	.	+	.	ID=gene160;Dbxref=GeneID:4808032;Name=SSA_2440;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2440
NC_009009.1	RefSeq	tRNA	129937	130017	.	+	.	ID=rna34;Parent=gene160;Dbxref=GeneID:4808032;gbkey=tRNA;product=tRNA-Tyr
NC_009009.1	RefSeq	exon	129937	130017	.	+	.	ID=id35;Parent=rna34;Dbxref=GeneID:4808032;gbkey=tRNA;product=tRNA-Tyr
NC_009009.1	RefSeq	gene	130026	130096	.	+	.	ID=gene161;Dbxref=GeneID:4807978;Name=SSA_2441;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2441
NC_009009.1	RefSeq	tRNA	130026	130096	.	+	.	ID=rna35;Parent=gene161;Dbxref=GeneID:4807978;gbkey=tRNA;product=tRNA-Trp
NC_009009.1	RefSeq	exon	130026	130096	.	+	.	ID=id36;Parent=rna35;Dbxref=GeneID:4807978;gbkey=tRNA;product=tRNA-Trp
NC_009009.1	RefSeq	gene	130107	130179	.	+	.	ID=gene162;Dbxref=GeneID:4806012;Name=SSA_2442;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2442
NC_009009.1	RefSeq	tRNA	130107	130179	.	+	.	ID=rna36;Parent=gene162;Dbxref=GeneID:4806012;gbkey=tRNA;product=tRNA-His
NC_009009.1	RefSeq	exon	130107	130179	.	+	.	ID=id37;Parent=rna36;Dbxref=GeneID:4806012;gbkey=tRNA;product=tRNA-His
NC_009009.1	RefSeq	gene	130193	130264	.	+	.	ID=gene163;Dbxref=GeneID:4806820;Name=SSA_2443;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2443
NC_009009.1	RefSeq	tRNA	130193	130264	.	+	.	ID=rna37;Parent=gene163;Dbxref=GeneID:4806820;gbkey=tRNA;product=tRNA-Gln
NC_009009.1	RefSeq	exon	130193	130264	.	+	.	ID=id38;Parent=rna37;Dbxref=GeneID:4806820;gbkey=tRNA;product=tRNA-Gln
NC_009009.1	RefSeq	gene	130277	130360	.	+	.	ID=gene164;Dbxref=GeneID:4807593;Name=SSA_2444;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2444
NC_009009.1	RefSeq	tRNA	130277	130360	.	+	.	ID=rna38;Parent=gene164;Dbxref=GeneID:4807593;Note=tRNA-Leu_3;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	130277	130360	.	+	.	ID=id39;Parent=rna38;Dbxref=GeneID:4807593;Note=tRNA-Leu_3;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	130714	131157	.	+	.	ID=gene165;Dbxref=GeneID:4806188;Name=adcR;gbkey=Gene;gene=adcR;gene_biotype=protein_coding;locus_tag=SSA_0135
NC_009009.1	RefSeq	CDS	130714	131157	.	+	0	ID=cds126;Parent=gene165;Dbxref=Genbank:YP_001034147.1,GeneID:4806188;Name=YP_001034147.1;Note=GC: 41.44%25%3B Codon Adaptation Index (CAI): 0.796. Helix-turn-helix prediction: LysR\AraC. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;gene=adcR;product=multiple antibiotic resistance operon transcription repressor MarR;protein_id=YP_001034147.1;transl_table=11
NC_009009.1	RefSeq	gene	131154	131864	.	+	.	ID=gene166;Dbxref=GeneID:4807674;Name=adcC;gbkey=Gene;gene=adcC;gene_biotype=protein_coding;locus_tag=SSA_0136
NC_009009.1	RefSeq	CDS	131154	131864	.	+	0	ID=cds127;Parent=gene166;Dbxref=Genbank:YP_001034148.1,GeneID:4807674;Name=YP_001034148.1;Note=GC: 44.44%25%3B Transporter classification TC:3.A.1.15.3. Codon Adaptation Index (CAI): 0.809. Curator(s): M. Serrano;gbkey=CDS;gene=adcC;product=zinc ABC transporter;protein_id=YP_001034148.1;transl_table=11
NC_009009.1	RefSeq	gene	131857	132663	.	+	.	ID=gene167;Dbxref=GeneID:4807353;Name=adcB;gbkey=Gene;gene=adcB;gene_biotype=protein_coding;locus_tag=SSA_0137
NC_009009.1	RefSeq	CDS	131857	132663	.	+	0	ID=cds128;Parent=gene167;Dbxref=Genbank:YP_001034149.1,GeneID:4807353;Name=YP_001034149.1;Note=GC: 45.23%25%3B Transporter classification TC:3.A.1.15.3. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.727. Curator(s): M. Serrano;gbkey=CDS;gene=adcB;product=zinc ABC transporter permease;protein_id=YP_001034149.1;transl_table=11
NC_009009.1	RefSeq	gene	132673	134175	.	+	.	ID=gene168;Dbxref=GeneID:4807346;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=SSA_0138
NC_009009.1	RefSeq	CDS	132673	134175	.	+	0	ID=cds129;Parent=gene168;Dbxref=Genbank:YP_001034150.1,GeneID:4807346;Name=YP_001034150.1;Note=GC: 43.58%25%3B Transporter classification TC:3.A.1.15.3. Codon Adaptation Index (CAI): 0.806. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.998)%3B Curator(s): M. Serrano;gbkey=CDS;gene=adcA;product=Zn-binding lipoprotein;protein_id=YP_001034150.1;transl_table=11
NC_009009.1	RefSeq	gene	134323	134766	.	+	.	ID=gene169;Dbxref=GeneID:4807886;Name=SSA_0139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0139
NC_009009.1	RefSeq	CDS	134323	134766	.	+	0	ID=cds130;Parent=gene169;Dbxref=Genbank:YP_001034151.1,GeneID:4807886;Name=YP_001034151.1;Note=GC: 45.27%25%3B Codon Adaptation Index (CAI): 0.756. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=copper transport operon or penicillinase transcriptional repressor;protein_id=YP_001034151.1;transl_table=11
NC_009009.1	RefSeq	gene	134766	137012	.	+	.	ID=gene170;Dbxref=GeneID:4806725;Name=ctpA;gbkey=Gene;gene=ctpA;gene_biotype=protein_coding;locus_tag=SSA_0140
NC_009009.1	RefSeq	CDS	134766	137012	.	+	0	ID=cds131;Parent=gene170;Dbxref=Genbank:YP_001034152.1,GeneID:4806725;Name=YP_001034152.1;Note=GC: 47.93%25%3B Transporter classification TC:3.A.3.5.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.753. LipoP prediction: SpI. Helix-turn-helix prediction: AraC. Curator(s): M. Serrano;gbkey=CDS;gene=ctpA;product=copper-translocating P-type ATPase;protein_id=YP_001034152.1;transl_table=11
NC_009009.1	RefSeq	gene	137033	137251	.	+	.	ID=gene171;Dbxref=GeneID:4805910;Name=SSA_0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0141
NC_009009.1	RefSeq	CDS	137033	137251	.	+	0	ID=cds132;Parent=gene171;Dbxref=Genbank:YP_001034153.1,GeneID:4805910;Name=YP_001034153.1;Note=GC: 43.84%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): M. Serrano;gbkey=CDS;product=copper chaperone;protein_id=YP_001034153.1;transl_table=11
NC_009009.1	RefSeq	gene	137370	137549	.	+	.	ID=gene172;Dbxref=GeneID:4806046;Name=SSA_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0142
NC_009009.1	RefSeq	CDS	137370	137549	.	+	0	ID=cds133;Parent=gene172;Dbxref=Genbank:YP_001034154.1,GeneID:4806046;Name=YP_001034154.1;Note=GC: 45.56%25%3B Codon Adaptation Index (CAI): 0.721. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034154.1;transl_table=11
NC_009009.1	RefSeq	gene	137605	137940	.	+	.	ID=gene173;Dbxref=GeneID:4806217;Name=SSA_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0143
NC_009009.1	RefSeq	CDS	137605	137940	.	+	0	ID=cds134;Parent=gene173;Dbxref=Genbank:YP_001034155.1,GeneID:4806217;Name=YP_001034155.1;Note=GC: 46.13%25%3B Codon Adaptation Index (CAI): 0.83. Curator(s): M. Serrano %3B T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034155.1;transl_table=11
NC_009009.1	RefSeq	gene	138083	138655	.	-	.	ID=gene174;Dbxref=GeneID:4806766;Name=SSA_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0144
NC_009009.1	RefSeq	CDS	138083	138655	.	-	0	ID=cds135;Parent=gene174;Dbxref=Genbank:YP_001034156.1,GeneID:4806766;Name=YP_001034156.1;Note=GC: 38.74%25%3B Codon Adaptation Index (CAI): 0.795. Helix-turn-helix prediction: AraC. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_001034156.1;transl_table=11
NC_009009.1	RefSeq	gene	138868	139470	.	-	.	ID=gene175;Dbxref=GeneID:4807990;Name=SSA_0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0145
NC_009009.1	RefSeq	CDS	138868	139470	.	-	0	ID=cds136;Parent=gene175;Dbxref=Genbank:YP_001034157.1,GeneID:4807990;Name=YP_001034157.1;Note=GC: 40.8%25%3B Codon Adaptation Index (CAI): 0.764. Helix-turn-helix prediction: AraC. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_001034157.1;transl_table=11
NC_009009.1	RefSeq	gene	139826	142219	.	+	.	ID=gene176;Dbxref=GeneID:4808086;Name=SSA_0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0146
NC_009009.1	RefSeq	CDS	139826	142219	.	+	0	ID=cds137;Parent=gene176;Dbxref=Genbank:YP_001034158.1,GeneID:4808086;Name=YP_001034158.1;Note=GC: 44.57%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.772. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Possible ATPase involved in DNA repair%2C contains Gram-positive anchor. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=DNA repair ATPase;protein_id=YP_001034158.1;transl_table=11
NC_009009.1	RefSeq	gene	142397	143527	.	+	.	ID=gene177;Dbxref=GeneID:4806538;Name=SSA_0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0148
NC_009009.1	RefSeq	CDS	142397	143527	.	+	0	ID=cds138;Parent=gene177;Dbxref=Genbank:YP_001034159.1,GeneID:4806538;Name=YP_001034159.1;Note=GC: 47.21%25%3B Transporter classification TC:3.A.1.1.2. Codon Adaptation Index (CAI): 0.77. Curator(s): M. Serrano;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_001034159.1;transl_table=11
NC_009009.1	RefSeq	gene	143714	143893	.	+	.	ID=gene178;Dbxref=GeneID:4806504;Name=SSA_0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0149
NC_009009.1	RefSeq	CDS	143714	143893	.	+	0	ID=cds139;Parent=gene178;Dbxref=Genbank:YP_001034160.1,GeneID:4806504;Name=YP_001034160.1;Note=GC: 41.11%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.82. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034160.1;transl_table=11
NC_009009.1	RefSeq	gene	144076	145287	.	+	.	ID=gene179;Dbxref=GeneID:4806261;Name=SSA_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0150
NC_009009.1	RefSeq	CDS	144076	145287	.	+	0	ID=cds140;Parent=gene179;Dbxref=Genbank:YP_001034161.1,GeneID:4806261;Name=YP_001034161.1;Note=GC: 43.23%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034161.1;transl_table=11
NC_009009.1	RefSeq	gene	145494	145931	.	+	.	ID=gene180;Dbxref=GeneID:4805883;Name=SSA_0151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0151
NC_009009.1	RefSeq	CDS	145494	145931	.	+	0	ID=cds141;Parent=gene180;Dbxref=Genbank:YP_001034162.1,GeneID:4805883;Name=YP_001034162.1;Note=GC: 40.87%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.79. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034162.1;transl_table=11
NC_009009.1	RefSeq	gene	145939	148791	.	+	.	ID=gene181;Dbxref=GeneID:4806723;Name=SSA_0152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0152
NC_009009.1	RefSeq	CDS	145939	148791	.	+	0	ID=cds142;Parent=gene181;Dbxref=Genbank:YP_001034163.1,GeneID:4806723;Name=YP_001034163.1;Note=GC: 42.87%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.786. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034163.1;transl_table=11
NC_009009.1	RefSeq	gene	148817	149563	.	+	.	ID=gene182;Dbxref=GeneID:4806541;Name=SSA_0153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0153
NC_009009.1	RefSeq	CDS	148817	149563	.	+	0	ID=cds143;Parent=gene182;Dbxref=Genbank:YP_001034164.1,GeneID:4806541;Name=YP_001034164.1;Note=GC: 42.7%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.737. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034164.1;transl_table=11
NC_009009.1	RefSeq	gene	149976	151010	.	+	.	ID=gene183;Dbxref=GeneID:4806584;Name=SSA_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0154
NC_009009.1	RefSeq	CDS	149976	151010	.	+	0	ID=cds144;Parent=gene183;Dbxref=Genbank:YP_001034165.1,GeneID:4806584;Name=YP_001034165.1;Note=GC: 38.94%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.811. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034165.1;transl_table=11
NC_009009.1	RefSeq	gene	151101	151466	.	+	.	ID=gene184;Dbxref=GeneID:4806120;Name=SSA_0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0155
NC_009009.1	RefSeq	CDS	151101	151466	.	+	0	ID=cds145;Parent=gene184;Dbxref=Genbank:YP_001034166.1,GeneID:4806120;Name=YP_001034166.1;Note=GC: 40.98%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.721. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034166.1;transl_table=11
NC_009009.1	RefSeq	gene	151466	153382	.	+	.	ID=gene185;Dbxref=GeneID:4806040;Name=SSA_0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0156
NC_009009.1	RefSeq	CDS	151466	153382	.	+	0	ID=cds146;Parent=gene185;Dbxref=Genbank:YP_001034167.1,GeneID:4806040;Name=YP_001034167.1;Note=GC: 44.5%25%3B Codon Adaptation Index (CAI): 0.78. Helix-turn-helix prediction: AraC. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=chaperone ATPase;protein_id=YP_001034167.1;transl_table=11
NC_009009.1	RefSeq	gene	153653	153937	.	+	.	ID=gene186;Dbxref=GeneID:4806661;Name=SSA_0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0157
NC_009009.1	RefSeq	CDS	153653	153937	.	+	0	ID=cds147;Parent=gene186;Dbxref=Genbank:YP_001034168.1,GeneID:4806661;Name=YP_001034168.1;Note=GC: 44.56%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.807. LipoP prediction: SpI. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034168.1;transl_table=11
NC_009009.1	RefSeq	gene	153941	155134	.	+	.	ID=gene187;Dbxref=GeneID:4806548;Name=SSA_0158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0158
NC_009009.1	RefSeq	CDS	153941	155134	.	+	0	ID=cds148;Parent=gene187;Dbxref=Genbank:YP_001034169.1,GeneID:4806548;Name=YP_001034169.1;Note=GC: 42.04%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.795. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034169.1;transl_table=11
NC_009009.1	RefSeq	gene	155140	157116	.	+	.	ID=gene188;Dbxref=GeneID:4806771;Name=SSA_0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0159
NC_009009.1	RefSeq	CDS	155140	157116	.	+	0	ID=cds149;Parent=gene188;Dbxref=Genbank:YP_001034170.1,GeneID:4806771;Name=YP_001034170.1;Note=GC: 40.92%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034170.1;transl_table=11
NC_009009.1	RefSeq	gene	158875	159579	.	+	.	ID=gene189;Dbxref=GeneID:4806384;Name=SSA_0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0160
NC_009009.1	RefSeq	CDS	158875	159579	.	+	0	ID=cds150;Parent=gene189;Dbxref=Genbank:YP_001034171.1,GeneID:4806384;Name=YP_001034171.1;Note=GC: 40.57%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034171.1;transl_table=11
NC_009009.1	RefSeq	gene	159585	161522	.	+	.	ID=gene190;Dbxref=GeneID:4805991;Name=SSA_0161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0161
NC_009009.1	RefSeq	CDS	159585	161522	.	+	0	ID=cds151;Parent=gene190;Dbxref=Genbank:YP_001034172.1,GeneID:4805991;Name=YP_001034172.1;Note=GC: 43.5%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034172.1;transl_table=11
NC_009009.1	RefSeq	gene	161531	162199	.	+	.	ID=gene191;Dbxref=GeneID:4805871;Name=SSA_0162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0162
NC_009009.1	RefSeq	CDS	161531	162199	.	+	0	ID=cds152;Parent=gene191;Dbxref=Genbank:YP_001034173.1,GeneID:4805871;Name=YP_001034173.1;Note=GC: 41.7%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496)%3B Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034173.1;transl_table=11
NC_009009.1	RefSeq	gene	162267	162602	.	+	.	ID=gene192;Dbxref=GeneID:4806191;Name=SSA_0163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0163
NC_009009.1	RefSeq	CDS	162267	162602	.	+	0	ID=cds153;Parent=gene192;Dbxref=Genbank:YP_001034174.1,GeneID:4806191;Name=YP_001034174.1;Note=GC: 41.37%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034174.1;transl_table=11
NC_009009.1	RefSeq	gene	162618	164057	.	+	.	ID=gene193;Dbxref=GeneID:4806280;Name=SSA_0164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0164
NC_009009.1	RefSeq	CDS	162618	164057	.	+	0	ID=cds154;Parent=gene193;Dbxref=Genbank:YP_001034175.1,GeneID:4806280;Name=YP_001034175.1;Note=GC: 45.49%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.993)%3B Curator(s): M. Serrano %2C J. Alves%3B possible function in cell wall glycoprotein metabolism;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034175.1;transl_table=11
NC_009009.1	RefSeq	gene	164078	164683	.	+	.	ID=gene194;Dbxref=GeneID:4806299;Name=SSA_0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0165
NC_009009.1	RefSeq	CDS	164078	164683	.	+	0	ID=cds155;Parent=gene194;Dbxref=Genbank:YP_001034176.1,GeneID:4806299;Name=YP_001034176.1;Note=GC: 41.58%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.725. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034176.1;transl_table=11
NC_009009.1	RefSeq	gene	164781	165206	.	+	.	ID=gene195;Dbxref=GeneID:4806553;Name=SSA_0166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0166
NC_009009.1	RefSeq	CDS	164781	165206	.	+	0	ID=cds156;Parent=gene195;Dbxref=Genbank:YP_001034177.1,GeneID:4806553;Name=YP_001034177.1;Note=GC: 39.67%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034177.1;transl_table=11
NC_009009.1	RefSeq	gene	165394	166395	.	+	.	ID=gene196;Dbxref=GeneID:4807682;Name=SSA_0167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0167
NC_009009.1	RefSeq	CDS	165394	166395	.	+	0	ID=cds157;Parent=gene196;Dbxref=Genbank:YP_001034178.1,GeneID:4807682;Name=YP_001034178.1;Note=GC: 50.2%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034178.1;transl_table=11
NC_009009.1	RefSeq	gene	166597	167577	.	+	.	ID=gene197;Dbxref=GeneID:4806563;Name=SSA_0168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0168
NC_009009.1	RefSeq	CDS	166597	167577	.	+	0	ID=cds158;Parent=gene197;Dbxref=Genbank:YP_001034179.1,GeneID:4806563;Name=YP_001034179.1;Note=GC: 40.37%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034179.1;transl_table=11
NC_009009.1	RefSeq	gene	167881	168075	.	+	.	ID=gene198;Dbxref=GeneID:4807822;Name=SSA_0169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0169
NC_009009.1	RefSeq	CDS	167881	168075	.	+	0	ID=cds159;Parent=gene198;Dbxref=Genbank:YP_001034180.1,GeneID:4807822;Name=YP_001034180.1;Note=GC: 33.85%25%3B Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034180.1;transl_table=11
NC_009009.1	RefSeq	gene	168220	168798	.	-	.	ID=gene199;Dbxref=GeneID:4806515;Name=SSA_0170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0170
NC_009009.1	RefSeq	CDS	168220	168798	.	-	0	ID=cds160;Parent=gene199;Dbxref=Genbank:YP_001034181.1,GeneID:4806515;Name=YP_001034181.1;Note=GC: 37.65%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034181.1;transl_table=11
NC_009009.1	RefSeq	gene	168855	169046	.	-	.	ID=gene200;Dbxref=GeneID:4807649;Name=SSA_0171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0171
NC_009009.1	RefSeq	CDS	168855	169046	.	-	0	ID=cds161;Parent=gene200;Dbxref=Genbank:YP_001034182.1,GeneID:4807649;Name=YP_001034182.1;Note=GC: 37.5%25%3B Codon Adaptation Index (CAI): 0.711. Helix-turn-helix prediction: AraC. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=Cro family transcriptional regulator;protein_id=YP_001034182.1;transl_table=11
NC_009009.1	RefSeq	gene	169280	169732	.	+	.	ID=gene201;Dbxref=GeneID:4806677;Name=SSA_0172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0172
NC_009009.1	RefSeq	CDS	169280	169732	.	+	0	ID=cds162;Parent=gene201;Dbxref=Genbank:YP_001034183.1,GeneID:4806677;Name=YP_001034183.1;Note=GC: 41.5%25%3B Codon Adaptation Index (CAI): 0.745. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034183.1;transl_table=11
NC_009009.1	RefSeq	gene	169786	170625	.	-	.	ID=gene202;Dbxref=GeneID:4806054;Name=rrmA;gbkey=Gene;gene=rrmA;gene_biotype=protein_coding;locus_tag=SSA_0173
NC_009009.1	RefSeq	CDS	169786	170625	.	-	0	ID=cds163;Parent=gene202;Dbxref=Genbank:YP_001034184.1,GeneID:4806054;Name=YP_001034184.1;Note=GC: 42.62%25%3B Codon Adaptation Index (CAI): 0.774. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.57)%3B Curator(s): M. Serrano;gbkey=CDS;gene=rrmA;product=23S rRNA m(1)G745 methyltransferase;protein_id=YP_001034184.1;transl_table=11
NC_009009.1	RefSeq	gene	170719	171978	.	-	.	ID=gene203;Dbxref=GeneID:4806704;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=SSA_0174
NC_009009.1	RefSeq	CDS	170719	171978	.	-	0	ID=cds164;Parent=gene203;Dbxref=Genbank:YP_001034185.1,GeneID:4806704;Name=YP_001034185.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=YP_001034185.1;transl_table=11
NC_009009.1	RefSeq	gene	172130	174544	.	+	.	ID=gene204;Dbxref=GeneID:4806508;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=SSA_0134
NC_009009.1	RefSeq	CDS	172130	174544	.	+	0	ID=cds165;Parent=gene204;Dbxref=Genbank:YP_001034186.1,GeneID:4806508;Name=YP_001034186.1;Note=GC: 46.63%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.778. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;gene=mrcB;product=membrane carboxypeptidase;protein_id=YP_001034186.1;transl_table=11
NC_009009.1	RefSeq	gene	172292	174544	.	+	.	ID=gene205;Dbxref=GeneID:4806392;Name=pbp1b;gbkey=Gene;gene=pbp1b;gene_biotype=protein_coding;locus_tag=SSA_0175
NC_009009.1	RefSeq	CDS	172292	174544	.	+	0	ID=cds166;Parent=gene205;Dbxref=Genbank:YP_001034187.1,GeneID:4806392;Name=YP_001034187.1;Note=GC: 47.36%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.778. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.925)%3B Curator(s): M. Serrano;gbkey=CDS;gene=pbp1b;product=penicillin-binding protein 1B;protein_id=YP_001034187.1;transl_table=11
NC_009009.1	RefSeq	gene	175121	178504	.	+	.	ID=gene206;Dbxref=GeneID:4807834;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SSA_0176
NC_009009.1	RefSeq	CDS	175121	178504	.	+	0	ID=cds167;Parent=gene206;Dbxref=Genbank:YP_001034188.1,GeneID:4807834;Name=YP_001034188.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_001034188.1;transl_table=11
NC_009009.1	RefSeq	gene	178545	182192	.	+	.	ID=gene207;Dbxref=GeneID:4806145;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=SSA_0177
NC_009009.1	RefSeq	CDS	178545	182192	.	+	0	ID=cds168;Parent=gene207;Dbxref=Genbank:YP_001034189.1,GeneID:4806145;Name=YP_001034189.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase subunit beta';protein_id=YP_001034189.1;transl_table=11
NC_009009.1	RefSeq	gene	182956	184113	.	+	.	ID=gene208;Dbxref=GeneID:4805975;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=SSA_0178
NC_009009.1	RefSeq	CDS	182956	184113	.	+	0	ID=cds169;Parent=gene208;Dbxref=Genbank:YP_001034190.1,GeneID:4805975;Name=YP_001034190.1;Note=GC: 44.73%25%3B Codon Adaptation Index (CAI): 0.809. Curator(s): M. Serrano;gbkey=CDS;gene=epsC;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=YP_001034190.1;transl_table=11
NC_009009.1	RefSeq	gene	184106	184894	.	+	.	ID=gene209;Dbxref=GeneID:4806922;Name=SSA_0179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0179
NC_009009.1	RefSeq	CDS	184106	184894	.	+	0	ID=cds170;Parent=gene209;Dbxref=Genbank:YP_001034191.1,GeneID:4806922;Name=YP_001034191.1;Note=GC: 40.18%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.761. Curator(s): M. Serrano %2C J. Alves%3B possibly membrane-associated;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034191.1;transl_table=11
NC_009009.1	RefSeq	gene	184906	185049	.	+	.	ID=gene210;Dbxref=GeneID:4807208;Name=SSA_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0180
NC_009009.1	RefSeq	CDS	184906	185049	.	+	0	ID=cds171;Parent=gene210;Dbxref=Genbank:YP_001034192.1,GeneID:4807208;Name=YP_001034192.1;Note=GC: 31.94%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.772. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034192.1;transl_table=11
NC_009009.1	RefSeq	gene	185042	186352	.	+	.	ID=gene211;Dbxref=GeneID:4806889;Name=SSA_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0181
NC_009009.1	RefSeq	CDS	185042	186352	.	+	0	ID=cds172;Parent=gene211;Dbxref=Genbank:YP_001034193.1,GeneID:4806889;Name=YP_001034193.1;Note=GC: 43.94%25%3B Transporter classification TC:9.B.32.1.3. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.79. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.585)%3B Helix-turn-helix prediction: AraC. Curator(s): M. Serrano;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_001034193.1;transl_table=11
NC_009009.1	RefSeq	gene	186439	187467	.	+	.	ID=gene212;Dbxref=GeneID:4807011;Name=SSA_0182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0182
NC_009009.1	RefSeq	CDS	186439	187467	.	+	0	ID=cds173;Parent=gene212;Dbxref=Genbank:YP_001034194.1,GeneID:4807011;Name=YP_001034194.1;Note=GC: 42.37%25%3B Codon Adaptation Index (CAI): 0.795. Curator(s): M. Serrano;gbkey=CDS;product=endoglucanase;protein_id=YP_001034194.1;transl_table=11
NC_009009.1	RefSeq	gene	187786	188166	.	+	.	ID=gene213;Dbxref=GeneID:4807274;Name=SSA_0183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0183
NC_009009.1	RefSeq	CDS	187786	188166	.	+	0	ID=cds174;Parent=gene213;Dbxref=Genbank:YP_001034195.1,GeneID:4807274;Name=YP_001034195.1;Note=GC: 45.41%25%3B Codon Adaptation Index (CAI): 0.814. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034195.1;transl_table=11
NC_009009.1	RefSeq	gene	188296	189237	.	+	.	ID=gene214;Dbxref=GeneID:4807575;Name=comYA;gbkey=Gene;gene=comYA;gene_biotype=protein_coding;locus_tag=SSA_0184
NC_009009.1	RefSeq	CDS	188296	189237	.	+	0	ID=cds175;Parent=gene214;Dbxref=Genbank:YP_001034196.1,GeneID:4807575;Name=YP_001034196.1;Note=GC: 47.24%25%3B Transporter classification TC:3.A.14.1.1. Codon Adaptation Index (CAI): 0.79. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;gene=comYA;product=competence protein ComYA;protein_id=YP_001034196.1;transl_table=11
NC_009009.1	RefSeq	gene	189197	190201	.	+	.	ID=gene215;Dbxref=GeneID:4806874;Name=comYB;gbkey=Gene;gene=comYB;gene_biotype=protein_coding;locus_tag=SSA_0185
NC_009009.1	RefSeq	CDS	189197	190201	.	+	0	ID=cds176;Parent=gene215;Dbxref=Genbank:YP_001034197.1,GeneID:4806874;Name=YP_001034197.1;Note=GC: 44.18%25%3B Transporter classification TC:3.A.14.1.1. Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;gene=comYB;product=competence protein ComYB;protein_id=YP_001034197.1;transl_table=11
NC_009009.1	RefSeq	gene	190201	190518	.	+	.	ID=gene216;Dbxref=GeneID:4807050;Name=comYC;gbkey=Gene;gene=comYC;gene_biotype=protein_coding;locus_tag=SSA_0186
NC_009009.1	RefSeq	CDS	190201	190518	.	+	0	ID=cds177;Parent=gene216;Dbxref=Genbank:YP_001034198.1,GeneID:4807050;Name=YP_001034198.1;Note=GC: 42.45%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.818. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.982)%3B Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;gene=comYC;product=competence protein ComYC;protein_id=YP_001034198.1;transl_table=11
NC_009009.1	RefSeq	gene	190490	190912	.	+	.	ID=gene217;Dbxref=GeneID:4807087;Name=comYD;gbkey=Gene;gene=comYD;gene_biotype=protein_coding;locus_tag=SSA_0187
NC_009009.1	RefSeq	CDS	190490	190912	.	+	0	ID=cds178;Parent=gene217;Dbxref=Genbank:YP_001034199.1,GeneID:4807087;Name=YP_001034199.1;Note=GC: 45.86%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.741. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;gene=comYD;product=competence protein ComYD;protein_id=YP_001034199.1;transl_table=11
NC_009009.1	RefSeq	gene	190938	191171	.	+	.	ID=gene218;Dbxref=GeneID:4807697;Name=SSA_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0188
NC_009009.1	RefSeq	CDS	190938	191171	.	+	0	ID=cds179;Parent=gene218;Dbxref=Genbank:YP_001034200.1,GeneID:4807697;Name=YP_001034200.1;Note=GC: 48.72%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034200.1;transl_table=11
NC_009009.1	RefSeq	gene	191155	191583	.	+	.	ID=gene219;Dbxref=GeneID:4806963;Name=SSA_0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0189
NC_009009.1	RefSeq	CDS	191155	191583	.	+	0	ID=cds180;Parent=gene219;Dbxref=Genbank:YP_001034201.1,GeneID:4806963;Name=YP_001034201.1;Note=GC: 46.39%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=competence protein ComGF;protein_id=YP_001034201.1;transl_table=11
NC_009009.1	RefSeq	gene	191621	191965	.	+	.	ID=gene220;Dbxref=GeneID:4807444;Name=SSA_0190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0190
NC_009009.1	RefSeq	CDS	191621	191965	.	+	0	ID=cds181;Parent=gene220;Dbxref=Genbank:YP_001034202.1,GeneID:4807444;Name=YP_001034202.1;Note=GC: 47.54%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034202.1;transl_table=11
NC_009009.1	RefSeq	gene	192047	193012	.	+	.	ID=gene221;Dbxref=GeneID:4807497;Name=SSA_0191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0191
NC_009009.1	RefSeq	CDS	192047	193012	.	+	0	ID=cds182;Parent=gene221;Dbxref=Genbank:YP_001034203.1,GeneID:4807497;Name=YP_001034203.1;Note=GC: 41.82%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=adenine-specific DNA methylase;protein_id=YP_001034203.1;transl_table=11
NC_009009.1	RefSeq	gene	193049	194242	.	+	.	ID=gene222;Dbxref=GeneID:4807938;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=SSA_0192
NC_009009.1	RefSeq	CDS	193049	194242	.	+	0	ID=cds183;Parent=gene222;Dbxref=Genbank:YP_001034204.1,GeneID:4807938;Name=YP_001034204.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=YP_001034204.1;transl_table=11
NC_009009.1	RefSeq	gene	194458	195135	.	+	.	ID=gene223;Dbxref=GeneID:4807462;Name=SSA_0193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0193
NC_009009.1	RefSeq	CDS	194458	195135	.	+	0	ID=cds184;Parent=gene223;Dbxref=Genbank:YP_001034205.1,GeneID:4807462;Name=YP_001034205.1;Note=GC: 39.23%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.758. SignalP prediction: Yes (prob. 0.652)%3B Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=CAAX amino terminal protease family protein;protein_id=YP_001034205.1;transl_table=11
NC_009009.1	RefSeq	gene	195253	195891	.	+	.	ID=gene224;Dbxref=GeneID:4807777;Name=SSA_0195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0195
NC_009009.1	RefSeq	CDS	195253	195891	.	+	0	ID=cds185;Parent=gene224;Dbxref=Genbank:YP_001034206.1,GeneID:4807777;Name=YP_001034206.1;Note=GC: 45.54%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.762. Curator(s): M. Serrano;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034206.1;transl_table=11
NC_009009.1	RefSeq	gene	196086	197039	.	+	.	ID=gene225;Dbxref=GeneID:4807709;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SSA_0197
NC_009009.1	RefSeq	CDS	196086	197039	.	+	0	ID=cds186;Parent=gene225;Dbxref=Genbank:YP_001034207.1,GeneID:4807709;Name=YP_001034207.1;Note=GC: 48.11%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): M. Serrano;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=YP_001034207.1;transl_table=11
NC_009009.1	RefSeq	gene	197041	198435	.	+	.	ID=gene226;Dbxref=GeneID:4807900;Name=SSA_0198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0198
NC_009009.1	RefSeq	CDS	197041	198435	.	+	0	ID=cds187;Parent=gene226;Dbxref=Genbank:YP_001034208.1,GeneID:4807900;Name=YP_001034208.1;Note=GC: 48.24%25%3B Codon Adaptation Index (CAI): 0.749. Curator(s): M. Serrano;gbkey=CDS;product=dihydrofolate synthetase;protein_id=YP_001034208.1;transl_table=11
NC_009009.1	RefSeq	gene	198416	198970	.	+	.	ID=gene227;Dbxref=GeneID:4807670;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SSA_0199
NC_009009.1	RefSeq	CDS	198416	198970	.	+	0	ID=cds188;Parent=gene227;Dbxref=Genbank:YP_001034209.1,GeneID:4807670;Name=YP_001034209.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=YP_001034209.1;transl_table=11
NC_009009.1	RefSeq	gene	199058	199870	.	+	.	ID=gene228;Dbxref=GeneID:4808018;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=SSA_0200
NC_009009.1	RefSeq	CDS	199058	199870	.	+	0	ID=cds189;Parent=gene228;Dbxref=Genbank:YP_001034210.1,GeneID:4808018;Name=YP_001034210.1;Note=GC: 48.59%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): M. Serrano;gbkey=CDS;gene=folK;product=bifunctional folate synthesis protein;protein_id=YP_001034210.1;transl_table=11
NC_009009.1	RefSeq	gene	199965	200672	.	+	.	ID=gene229;Dbxref=GeneID:4807830;Name=SSA_0201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0201
NC_009009.1	RefSeq	CDS	199965	200672	.	+	0	ID=cds190;Parent=gene229;Dbxref=Genbank:YP_001034211.1,GeneID:4807830;Name=YP_001034211.1;Note=GC: 46.75%25%3B Transporter classification TC:3.A.1.124.2. Codon Adaptation Index (CAI): 0.74. Curator(s): M. Serrano %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter;protein_id=YP_001034211.1;transl_table=11
NC_009009.1	RefSeq	gene	200674	201462	.	+	.	ID=gene230;Dbxref=GeneID:4807607;Name=SSA_0202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0202
NC_009009.1	RefSeq	CDS	200674	201462	.	+	0	ID=cds191;Parent=gene230;Dbxref=Genbank:YP_001034212.1,GeneID:4807607;Name=YP_001034212.1;Note=GC: 46.51%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.752. Curator(s): P. Manque %2C J. Alves%3B possible transmembrane;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034212.1;transl_table=11
NC_009009.1	RefSeq	gene	201462	202184	.	+	.	ID=gene231;Dbxref=GeneID:4807913;Name=SSA_0203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0203
NC_009009.1	RefSeq	CDS	201462	202184	.	+	0	ID=cds192;Parent=gene231;Dbxref=Genbank:YP_001034213.1,GeneID:4807913;Name=YP_001034213.1;Note=GC: 44.54%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.728. SignalP prediction: Yes (prob. 0.63)%3B Curator(s): P. Manque %2C J. Alves%3B possible transmembrane;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034213.1;transl_table=11
NC_009009.1	RefSeq	gene	202197	202895	.	+	.	ID=gene232;Dbxref=GeneID:4807348;Name=nisR;gbkey=Gene;gene=nisR;gene_biotype=protein_coding;locus_tag=SSA_0204
NC_009009.1	RefSeq	CDS	202197	202895	.	+	0	ID=cds193;Parent=gene232;Dbxref=Genbank:YP_001034214.1,GeneID:4807348;Name=YP_001034214.1;Note=GC: 44.35%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=nisR;product=nisin biosynthesis two-component response transcriptional regulator nisR;protein_id=YP_001034214.1;transl_table=11
NC_009009.1	RefSeq	gene	202862	203899	.	+	.	ID=gene233;Dbxref=GeneID:4808004;Name=nisK;gbkey=Gene;gene=nisK;gene_biotype=protein_coding;locus_tag=SSA_0205
NC_009009.1	RefSeq	CDS	202862	203899	.	+	0	ID=cds194;Parent=gene233;Dbxref=Genbank:YP_001034215.1,GeneID:4808004;Name=YP_001034215.1;Note=GC: 42.58%25%3B Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.784. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=nisK;product=sensor-receptor histidine kinase NisK;protein_id=YP_001034215.1;transl_table=11
NC_009009.1	RefSeq	gene	204196	204399	.	+	.	ID=gene234;Dbxref=GeneID:4807922;Name=SSA_2393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2393
NC_009009.1	RefSeq	CDS	204196	204399	.	+	0	ID=cds195;Parent=gene234;Dbxref=Genbank:YP_001034216.1,GeneID:4807922;Name=YP_001034216.1;Note=GC: 39.22%25%3B Codon Adaptation Index (CAI): 0.741. Curator(s): J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034216.1;transl_table=11
NC_009009.1	RefSeq	gene	204396	204560	.	+	.	ID=gene235;Dbxref=GeneID:4807801;Name=SSA_0206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0206
NC_009009.1	RefSeq	CDS	204396	204560	.	+	0	ID=cds196;Parent=gene235;Dbxref=Genbank:YP_001034217.1,GeneID:4807801;Name=YP_001034217.1;Note=GC: 34.55%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.817. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034217.1;transl_table=11
NC_009009.1	RefSeq	gene	204570	205004	.	+	.	ID=gene236;Dbxref=GeneID:4807319;Name=SSA_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0207
NC_009009.1	RefSeq	CDS	204570	205004	.	+	0	ID=cds197;Parent=gene236;Dbxref=Genbank:YP_001034218.1,GeneID:4807319;Name=YP_001034218.1;Note=GC: 42.07%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.785. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034218.1;transl_table=11
NC_009009.1	RefSeq	gene	205058	206542	.	-	.	ID=gene237;Dbxref=GeneID:4807591;Name=SSA_0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0208
NC_009009.1	RefSeq	CDS	205058	206542	.	-	0	ID=cds198;Parent=gene237;Dbxref=Genbank:YP_001034219.1,GeneID:4807591;Name=YP_001034219.1;Note=GC: 46.94%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034219.1;transl_table=11
NC_009009.1	RefSeq	gene	206662	207726	.	-	.	ID=gene238;Dbxref=GeneID:4807327;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=SSA_0209
NC_009009.1	RefSeq	CDS	206662	207726	.	-	0	ID=cds199;Parent=gene238;Dbxref=Genbank:YP_001034220.1,GeneID:4807327;Name=YP_001034220.1;Note=GC: 52.58%25%3B Codon Adaptation Index (CAI): 0.759. Curator(s): P. Manque;gbkey=CDS;gene=pepA;product=glutamyl aminopeptidase;protein_id=YP_001034220.1;transl_table=11
NC_009009.1	RefSeq	gene	207897	208184	.	+	.	ID=gene239;Dbxref=GeneID:4807596;Name=SSA_0210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0210
NC_009009.1	RefSeq	CDS	207897	208184	.	+	0	ID=cds200;Parent=gene239;Dbxref=Genbank:YP_001034221.1,GeneID:4807596;Name=YP_001034221.1;Note=GC: 47.57%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.751. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034221.1;transl_table=11
NC_009009.1	RefSeq	gene	208181	208516	.	+	.	ID=gene240;Dbxref=GeneID:4806152;Name=trxA2;gbkey=Gene;gene=trxA2;gene_biotype=protein_coding;locus_tag=SSA_0211
NC_009009.1	RefSeq	CDS	208181	208516	.	+	0	ID=cds201;Parent=gene240;Dbxref=Genbank:YP_001034222.1,GeneID:4806152;Name=YP_001034222.1;Note=GC: 43.75%25%3B Codon Adaptation Index (CAI): 0.757. Curator(s): P. Manque;gbkey=CDS;gene=trxA2;product=hypothetical protein;protein_id=YP_001034222.1;transl_table=11
NC_009009.1	RefSeq	gene	208513	209139	.	+	.	ID=gene241;Dbxref=GeneID:4807246;Name=SSA_0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0212
NC_009009.1	RefSeq	CDS	208513	209139	.	+	0	ID=cds202;Parent=gene241;Dbxref=Genbank:YP_001034223.1,GeneID:4807246;Name=YP_001034223.1;Note=GC: 47.85%25%3B Codon Adaptation Index (CAI): 0.802. Curator(s): P. Manque;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_001034223.1;transl_table=11
NC_009009.1	RefSeq	gene	209638	210225	.	-	.	ID=gene242;Dbxref=GeneID:4807316;Name=SSA_0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0213
NC_009009.1	RefSeq	CDS	209638	210225	.	-	0	ID=cds203;Parent=gene242;Dbxref=Genbank:YP_001034224.1,GeneID:4807316;Name=YP_001034224.1;Note=GC: 45.75%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.713. SignalP prediction: Yes (prob. 0.927)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034224.1;transl_table=11
NC_009009.1	RefSeq	gene	210355	210750	.	+	.	ID=gene243;Dbxref=GeneID:4806023;Name=ssb2;gbkey=Gene;gene=ssb2;gene_biotype=protein_coding;locus_tag=SSA_0214
NC_009009.1	RefSeq	CDS	210355	210750	.	+	0	ID=cds204;Parent=gene243;Dbxref=Genbank:YP_001034225.1,GeneID:4806023;Name=YP_001034225.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;gene=ssb2;product=single-stranded DNA-binding protein;protein_id=YP_001034225.1;transl_table=11
NC_009009.1	RefSeq	gene	211031	212017	.	+	.	ID=gene244;Dbxref=GeneID:4806590;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=SSA_0215
NC_009009.1	RefSeq	CDS	211031	212017	.	+	0	ID=cds205;Parent=gene244;Dbxref=Genbank:YP_001034226.1,GeneID:4806590;Name=YP_001034226.1;Note=GC: 45.49%25%3B Transporter classification TC:3.A.1.2.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.762. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.516)%3B Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=rbsB;product=periplasmic sugar-binding protein (ribose porter);protein_id=YP_001034226.1;transl_table=11
NC_009009.1	RefSeq	gene	212017	213330	.	+	.	ID=gene245;Dbxref=GeneID:4806442;Name=SSA_0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0216
NC_009009.1	RefSeq	CDS	212017	213330	.	+	0	ID=cds206;Parent=gene245;Dbxref=Genbank:YP_001034227.1,GeneID:4806442;Name=YP_001034227.1;Note=GC: 44.98%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.745. Curator(s): P. Manque;gbkey=CDS;product=histidine kinase;protein_id=YP_001034227.1;transl_table=11
NC_009009.1	RefSeq	gene	213323	214006	.	+	.	ID=gene246;Dbxref=GeneID:4806830;Name=SSA_0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0217
NC_009009.1	RefSeq	CDS	213323	214006	.	+	0	ID=cds207;Parent=gene246;Dbxref=Genbank:YP_001034228.1,GeneID:4806830;Name=YP_001034228.1;Note=GC: 46.93%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001034228.1;transl_table=11
NC_009009.1	RefSeq	gene	214003	215286	.	+	.	ID=gene247;Dbxref=GeneID:4806647;Name=SSA_0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0218
NC_009009.1	RefSeq	CDS	214003	215286	.	+	0	ID=cds208;Parent=gene247;Dbxref=Genbank:YP_001034229.1,GeneID:4806647;Name=YP_001034229.1;Note=GC: 46.65%25%3B Transporter classification TC:3.A.1.1.16. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.787. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque;gbkey=CDS;product=sugar ABC transporter periplasmic protein;protein_id=YP_001034229.1;transl_table=11
NC_009009.1	RefSeq	gene	215507	215944	.	+	.	ID=gene248;Dbxref=GeneID:4808080;Name=SSA_0219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0219
NC_009009.1	RefSeq	CDS	215507	215944	.	+	0	ID=cds209;Parent=gene248;Dbxref=Genbank:YP_001034230.1,GeneID:4808080;Name=YP_001034230.1;Note=GC: 49.54%25%3B Transporter classification TC:4.A.6.1.4. Codon Adaptation Index (CAI): 0.79. Curator(s): P. Manque;gbkey=CDS;product=PTS system sugar-specific transporter subunit IIA;protein_id=YP_001034230.1;transl_table=11
NC_009009.1	RefSeq	gene	215988	216482	.	+	.	ID=gene249;Dbxref=GeneID:4805972;Name=SSA_0220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0220
NC_009009.1	RefSeq	CDS	215988	216482	.	+	0	ID=cds210;Parent=gene249;Dbxref=Genbank:YP_001034231.1,GeneID:4805972;Name=YP_001034231.1;Note=GC: 45.45%25%3B Transporter classification TC:4.A.6.1.2. Codon Adaptation Index (CAI): 0.79. Curator(s): P. Manque;gbkey=CDS;product=PTS system mannose-specific transporter subunit IIB;protein_id=YP_001034231.1;transl_table=11
NC_009009.1	RefSeq	gene	216510	217355	.	+	.	ID=gene250;Dbxref=GeneID:4806632;Name=SSA_0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0221
NC_009009.1	RefSeq	CDS	216510	217355	.	+	0	ID=cds211;Parent=gene250;Dbxref=Genbank:YP_001034232.1,GeneID:4806632;Name=YP_001034232.1;Note=GC: 44.92%25%3B Transporter classification TC:4.A.6.1.1. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.793. SignalP prediction: Yes (prob. 0.878)%3B Curator(s): P. Manque;gbkey=CDS;product=PTS system mannose-specific transporter subunit IIC;protein_id=YP_001034232.1;transl_table=11
NC_009009.1	RefSeq	gene	217357	218193	.	+	.	ID=gene251;Dbxref=GeneID:4806263;Name=SSA_0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0222
NC_009009.1	RefSeq	CDS	217357	218193	.	+	0	ID=cds212;Parent=gene251;Dbxref=Genbank:YP_001034233.1,GeneID:4806263;Name=YP_001034233.1;Note=GC: 45.64%25%3B Transporter classification TC:4.A.6.1.2. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.779. Curator(s): P. Manque;gbkey=CDS;product=PTS system mannose-specific transporter subunit IID;protein_id=YP_001034233.1;transl_table=11
NC_009009.1	RefSeq	gene	218288	218578	.	+	.	ID=gene252;Dbxref=GeneID:4806554;Name=SSA_0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0224
NC_009009.1	RefSeq	CDS	218288	218578	.	+	0	ID=cds213;Parent=gene252;Dbxref=Genbank:YP_001034234.1,GeneID:4806554;Name=YP_001034234.1;Note=GC: 39.86%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.736. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034234.1;transl_table=11
NC_009009.1	RefSeq	gene	218782	219063	.	+	.	ID=gene253;Dbxref=GeneID:4806471;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SSA_0225
NC_009009.1	RefSeq	CDS	218782	219063	.	+	0	ID=cds214;Parent=gene253;Dbxref=Genbank:YP_001034235.1,GeneID:4806471;Name=YP_001034235.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=co-chaperonin GroES;protein_id=YP_001034235.1;transl_table=11
NC_009009.1	RefSeq	gene	219087	220709	.	+	.	ID=gene254;Dbxref=GeneID:4806269;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=SSA_0226
NC_009009.1	RefSeq	CDS	219087	220709	.	+	0	ID=cds215;Parent=gene254;Dbxref=Genbank:YP_001034236.1,GeneID:4806269;Name=YP_001034236.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=YP_001034236.1;transl_table=11
NC_009009.1	RefSeq	gene	221177	223030	.	+	.	ID=gene255;Dbxref=GeneID:4807853;Name=SSA_0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0227
NC_009009.1	RefSeq	CDS	221177	223030	.	+	0	ID=cds216;Parent=gene255;Dbxref=Genbank:YP_001034237.1,GeneID:4807853;Name=YP_001034237.1;Note=GC: 43.58%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque %2C T. Kitten;gbkey=CDS;product=collagen-binding surface protein;protein_id=YP_001034237.1;transl_table=11
NC_009009.1	RefSeq	gene	223503	223634	.	+	.	ID=gene256;Dbxref=GeneID:4807565;Name=SSA_0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0228
NC_009009.1	RefSeq	CDS	223503	223634	.	+	0	ID=cds217;Parent=gene256;Dbxref=Genbank:YP_001034238.1,GeneID:4807565;Name=YP_001034238.1;Note=GC: 31.06%25%3B Codon Adaptation Index (CAI): 0.805. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034238.1;transl_table=11
NC_009009.1	RefSeq	gene	223675	223773	.	+	.	ID=gene257;Dbxref=GeneID:4805903;Name=SSA_0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0229
NC_009009.1	RefSeq	CDS	223675	223773	.	+	0	ID=cds218;Parent=gene257;Dbxref=Genbank:YP_001034239.1,GeneID:4805903;Name=YP_001034239.1;Note=GC: 31.31%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034239.1;transl_table=11
NC_009009.1	RefSeq	gene	223902	225047	.	-	.	ID=gene258;Dbxref=GeneID:4807135;Name=SSA_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0230
NC_009009.1	RefSeq	CDS	223902	225047	.	-	0	ID=cds219;Parent=gene258;Dbxref=Genbank:YP_001034240.1,GeneID:4807135;Name=YP_001034240.1;Note=GC: 33.16%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.75. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034240.1;transl_table=11
NC_009009.1	RefSeq	gene	225853	227142	.	+	.	ID=gene259;Dbxref=GeneID:4806787;Name=SSA_0231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0231
NC_009009.1	RefSeq	CDS	225853	227142	.	+	0	ID=cds220;Parent=gene259;Dbxref=Genbank:YP_001034241.1,GeneID:4806787;Name=YP_001034241.1;Note=GC: 39.61%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.76. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034241.1;transl_table=11
NC_009009.1	RefSeq	gene	227152	227337	.	+	.	ID=gene260;Dbxref=GeneID:4806140;Name=SSA_0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0232
NC_009009.1	RefSeq	CDS	227152	227337	.	+	0	ID=cds221;Parent=gene260;Dbxref=Genbank:YP_001034242.1,GeneID:4806140;Name=YP_001034242.1;Note=GC: 33.87%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.705. SignalP prediction: Yes (prob. 0.995)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034242.1;transl_table=11
NC_009009.1	RefSeq	gene	227343	228239	.	+	.	ID=gene261;Dbxref=GeneID:4806315;Name=SSA_0233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0233
NC_009009.1	RefSeq	CDS	227343	228239	.	+	0	ID=cds222;Parent=gene261;Dbxref=Genbank:YP_001034243.1,GeneID:4806315;Name=YP_001034243.1;Note=GC: 39.58%25%3B Transporter classification TC:9.B.22.1.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.709. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=permease;protein_id=YP_001034243.1;transl_table=11
NC_009009.1	RefSeq	gene	228378	228450	.	-	.	ID=gene262;Dbxref=GeneID:4806576;Name=SSA_2472;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2472
NC_009009.1	RefSeq	tRNA	228378	228450	.	-	.	ID=rna39;Parent=gene262;Dbxref=GeneID:4806576;Note=tRNA-Lys_4;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	exon	228378	228450	.	-	.	ID=id40;Parent=rna39;Dbxref=GeneID:4806576;Note=tRNA-Lys_4;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	gene	228513	229028	.	-	.	ID=gene263;Dbxref=GeneID:4806637;Name=SSA_0234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0234
NC_009009.1	RefSeq	CDS	228513	229028	.	-	0	ID=cds223;Parent=gene263;Dbxref=Genbank:YP_001034244.1,GeneID:4806637;Name=YP_001034244.1;Note=GC: 37.6%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.737. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034244.1;transl_table=11
NC_009009.1	RefSeq	gene	229701	230840	.	+	.	ID=gene264;Dbxref=GeneID:4806209;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=SSA_0235
NC_009009.1	RefSeq	CDS	229701	230840	.	+	0	ID=cds224;Parent=gene264;Dbxref=Genbank:YP_001034245.1,GeneID:4806209;Name=YP_001034245.1;Note=GC: 33.07%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): P. Manque;gbkey=CDS;gene=int;product=integrase/recombinase%2C phage associated;protein_id=YP_001034245.1;transl_table=11
NC_009009.1	RefSeq	gene	230927	230999	.	-	.	ID=gene265;Dbxref=GeneID:4806776;Name=SSA_2471;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2471
NC_009009.1	RefSeq	tRNA	230927	230999	.	-	.	ID=rna40;Parent=gene265;Dbxref=GeneID:4806776;Note=tRNA-Lys_3;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	exon	230927	230999	.	-	.	ID=id41;Parent=rna40;Dbxref=GeneID:4806776;Note=tRNA-Lys_3;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	gene	231265	232533	.	-	.	ID=gene266;Dbxref=GeneID:4805932;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=SSA_0236
NC_009009.1	RefSeq	CDS	231265	232533	.	-	0	ID=cds225;Parent=gene266;Dbxref=Genbank:YP_001034246.1,GeneID:4805932;Name=YP_001034246.1;Note=GC: 50.91%25%3B Codon Adaptation Index (CAI): 0.734. Curator(s): P. Manque;gbkey=CDS;gene=cshA;product=recombination factor protein RarA;protein_id=YP_001034246.1;transl_table=11
NC_009009.1	RefSeq	gene	232621	233091	.	+	.	ID=gene267;Dbxref=GeneID:4806726;Name=SSA_0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0238
NC_009009.1	RefSeq	CDS	232621	233091	.	+	0	ID=cds226;Parent=gene267;Dbxref=Genbank:YP_001034247.1,GeneID:4806726;Name=YP_001034247.1;Note=GC: 45.65%25%3B Codon Adaptation Index (CAI): 0.727. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034247.1;transl_table=11
NC_009009.1	RefSeq	gene	233101	233553	.	+	.	ID=gene268;Dbxref=GeneID:4806014;Name=SSA_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0239
NC_009009.1	RefSeq	CDS	233101	233553	.	+	0	ID=cds227;Parent=gene268;Dbxref=Genbank:YP_001034248.1,GeneID:4806014;Name=YP_001034248.1;Note=GC: 45.7%25%3B Codon Adaptation Index (CAI): 0.811. Curator(s): P. Manque;gbkey=CDS;product=7%2C8-dihydro-8-oxoguanine-triphosphatase;protein_id=YP_001034248.1;transl_table=11
NC_009009.1	RefSeq	gene	233550	234020	.	+	.	ID=gene269;Dbxref=GeneID:4807389;Name=SSA_0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0240
NC_009009.1	RefSeq	CDS	233550	234020	.	+	0	ID=cds228;Parent=gene269;Dbxref=Genbank:YP_001034249.1,GeneID:4807389;Name=YP_001034249.1;Note=GC: 45.65%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): P. Manque;gbkey=CDS;product=acetyltransferase;protein_id=YP_001034249.1;transl_table=11
NC_009009.1	RefSeq	gene	234161	235117	.	+	.	ID=gene270;Dbxref=GeneID:4806844;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=SSA_0241
NC_009009.1	RefSeq	CDS	234161	235117	.	+	0	ID=cds229;Parent=gene270;Dbxref=Genbank:YP_001034250.1,GeneID:4806844;Name=YP_001034250.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=50S ribosomal protein L11 methyltransferase;protein_id=YP_001034250.1;transl_table=11
NC_009009.1	RefSeq	gene	235118	235870	.	+	.	ID=gene271;Dbxref=GeneID:4806848;Name=SSA_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0242
NC_009009.1	RefSeq	CDS	235118	235870	.	+	0	ID=cds230;Parent=gene271;Dbxref=Genbank:YP_001034251.1,GeneID:4806848;Name=YP_001034251.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;product=16S ribosomal RNA methyltransferase RsmE;protein_id=YP_001034251.1;transl_table=11
NC_009009.1	RefSeq	gene	235914	238325	.	-	.	ID=gene272;Dbxref=GeneID:4808057;Name=yfkN;gbkey=Gene;gene=yfkN;gene_biotype=protein_coding;gene_synonym=cpdB;locus_tag=SSA_0243
NC_009009.1	RefSeq	CDS	235914	238325	.	-	0	ID=cds231;Parent=gene272;Dbxref=Genbank:YP_001034252.1,GeneID:4808057;Name=YP_001034252.1;Note=in Escherichia coli this is a periplasmic enzyme while in gram positive organisms it may be anchored at the cell surface%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=yfkN;product=bifunctional 2'%2C3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein;protein_id=YP_001034252.1;transl_table=11
NC_009009.1	RefSeq	gene	238838	239230	.	+	.	ID=gene273;Dbxref=GeneID:4806849;Name=SSA_0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0244
NC_009009.1	RefSeq	CDS	238838	239230	.	+	0	ID=cds232;Parent=gene273;Dbxref=Genbank:YP_001034253.1,GeneID:4806849;Name=YP_001034253.1;Note=GC: 35.62%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.756. SignalP prediction: Yes (prob. 0.67)%3B Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034253.1;transl_table=11
NC_009009.1	RefSeq	gene	239276	239668	.	+	.	ID=gene274;Dbxref=GeneID:4807411;Name=SSA_0245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0245
NC_009009.1	RefSeq	CDS	239276	239668	.	+	0	ID=cds233;Parent=gene274;Dbxref=Genbank:YP_001034254.1,GeneID:4807411;Name=YP_001034254.1;Note=GC: 34.86%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.774. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.734)%3B Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034254.1;transl_table=11
NC_009009.1	RefSeq	gene	239843	240166	.	+	.	ID=gene275;Dbxref=GeneID:4806847;Name=SSA_0246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0246
NC_009009.1	RefSeq	CDS	239843	240166	.	+	0	ID=cds234;Parent=gene275;Dbxref=Genbank:YP_001034255.1,GeneID:4806847;Name=YP_001034255.1;Note=GC: 37.65%25%3B Codon Adaptation Index (CAI): 0.775. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034255.1;transl_table=11
NC_009009.1	RefSeq	gene	240172	241515	.	+	.	ID=gene276;Dbxref=GeneID:4807967;Name=SSA_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0247
NC_009009.1	RefSeq	CDS	240172	241515	.	+	0	ID=cds235;Parent=gene276;Dbxref=Genbank:YP_001034256.1,GeneID:4807967;Name=YP_001034256.1;Note=GC: 39.81%25%3B Codon Adaptation Index (CAI): 0.769. Curator(s): P. Manque %2C J. Alves%3B possible lipase class 3;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034256.1;transl_table=11
NC_009009.1	RefSeq	gene	241500	241904	.	+	.	ID=gene277;Dbxref=GeneID:4807882;Name=SSA_0248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0248
NC_009009.1	RefSeq	CDS	241500	241904	.	+	0	ID=cds236;Parent=gene277;Dbxref=Genbank:YP_001034257.1,GeneID:4807882;Name=YP_001034257.1;Note=GC: 36.3%25%3B Codon Adaptation Index (CAI): 0.754. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034257.1;transl_table=11
NC_009009.1	RefSeq	gene	241891	242175	.	+	.	ID=gene278;Dbxref=GeneID:4807637;Name=SSA_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0249
NC_009009.1	RefSeq	CDS	241891	242175	.	+	0	ID=cds237;Parent=gene278;Dbxref=Genbank:YP_001034258.1,GeneID:4807637;Name=YP_001034258.1;Note=GC: 39.3%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034258.1;transl_table=11
NC_009009.1	RefSeq	gene	242307	244526	.	+	.	ID=gene279;Dbxref=GeneID:4807254;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=SSA_0250
NC_009009.1	RefSeq	CDS	242307	244526	.	+	0	ID=cds238;Parent=gene279;Dbxref=Genbank:YP_001034259.1,GeneID:4807254;Name=YP_001034259.1;Note=GC: 48.6%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): P. Manque;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=YP_001034259.1;transl_table=11
NC_009009.1	RefSeq	gene	244595	245038	.	+	.	ID=gene280;Dbxref=GeneID:4807474;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=SSA_0251
NC_009009.1	RefSeq	CDS	244595	245038	.	+	0	ID=cds239;Parent=gene280;Dbxref=Genbank:YP_001034260.1,GeneID:4807474;Name=YP_001034260.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;gene=dtd;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=YP_001034260.1;transl_table=11
NC_009009.1	RefSeq	gene	245132	245929	.	-	.	ID=gene281;Dbxref=GeneID:4806846;Name=SSA_0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0252
NC_009009.1	RefSeq	CDS	245132	245929	.	-	0	ID=cds240;Parent=gene281;Dbxref=Genbank:YP_001034261.1,GeneID:4806846;Name=YP_001034261.1;Note=GC: 43.36%25%3B Codon Adaptation Index (CAI): 0.753. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034261.1;transl_table=11
NC_009009.1	RefSeq	gene	246429	247043	.	+	.	ID=gene282;Dbxref=GeneID:4807927;Name=SSA_0253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0253
NC_009009.1	RefSeq	CDS	246429	247043	.	+	0	ID=cds241;Parent=gene282;Dbxref=Genbank:YP_001034262.1,GeneID:4807927;Name=YP_001034262.1;Note=GC: 39.51%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.752. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=CAAX amino terminal protease family protein;protein_id=YP_001034262.1;transl_table=11
NC_009009.1	RefSeq	gene	247157	247582	.	-	.	ID=gene283;Dbxref=GeneID:4808039;Name=SSA_0254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0254
NC_009009.1	RefSeq	CDS	247157	247582	.	-	0	ID=cds242;Parent=gene283;Dbxref=Genbank:YP_001034263.1,GeneID:4808039;Name=YP_001034263.1;Note=GC: 43.43%25%3B Codon Adaptation Index (CAI): 0.751. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034263.1;transl_table=11
NC_009009.1	RefSeq	gene	247575	248036	.	-	.	ID=gene284;Dbxref=GeneID:4807441;Name=SSA_0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0255
NC_009009.1	RefSeq	CDS	247575	248036	.	-	0	ID=cds243;Parent=gene284;Dbxref=Genbank:YP_001034264.1,GeneID:4807441;Name=YP_001034264.1;Note=GC: 43.72%25%3B Codon Adaptation Index (CAI): 0.739. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=multiple antibiotic resistance operon transcription repressor MarR;protein_id=YP_001034264.1;transl_table=11
NC_009009.1	RefSeq	gene	248142	248789	.	-	.	ID=gene285;Dbxref=GeneID:4806865;Name=SSA_0256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0256
NC_009009.1	RefSeq	CDS	248142	248789	.	-	0	ID=cds244;Parent=gene285;Dbxref=Genbank:YP_001034265.1,GeneID:4806865;Name=YP_001034265.1;Note=GC: 46.6%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=Fe/Mn-dependent transcriptional repressor ScaR;protein_id=YP_001034265.1;transl_table=11
NC_009009.1	RefSeq	gene	249018	251900	.	+	.	ID=gene286;Dbxref=GeneID:4807054;Name=SSA_0257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0257
NC_009009.1	RefSeq	CDS	249018	251900	.	+	0	ID=cds245;Parent=gene286;Dbxref=Genbank:YP_001034266.1,GeneID:4807054;Name=YP_001034266.1;Note=GC: 48.35%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque;gbkey=CDS;product=N-acetylmuramidase/lysin;protein_id=YP_001034266.1;transl_table=11
NC_009009.1	RefSeq	gene	251985	253082	.	+	.	ID=gene287;Dbxref=GeneID:4806226;Name=SSA_0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0258
NC_009009.1	RefSeq	CDS	251985	253082	.	+	0	ID=cds246;Parent=gene287;Dbxref=Genbank:YP_001034267.1,GeneID:4806226;Name=YP_001034267.1;Note=GC: 47.27%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034267.1;transl_table=11
NC_009009.1	RefSeq	gene	253103	253633	.	-	.	ID=gene288;Dbxref=GeneID:4806834;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=SSA_0259
NC_009009.1	RefSeq	CDS	253103	253633	.	-	0	ID=cds247;Parent=gene288;Dbxref=Genbank:YP_001034268.1,GeneID:4806834;Name=YP_001034268.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=YP_001034268.1;transl_table=11
NC_009009.1	RefSeq	gene	253746	254675	.	-	.	ID=gene289;Dbxref=GeneID:4806835;Name=ssaB;gbkey=Gene;gene=ssaB;gene_biotype=protein_coding;locus_tag=SSA_0260
NC_009009.1	RefSeq	CDS	253746	254675	.	-	0	ID=cds248;Parent=gene289;Dbxref=Genbank:YP_001034269.1,GeneID:4806835;Name=YP_001034269.1;Note=GC: 42.37%25%3B Transporter classification TC:3.A.1.15.2. Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=ssaB;product=Mn/Zn ABC transporter substrate-binding protein;protein_id=YP_001034269.1;transl_table=11
NC_009009.1	RefSeq	gene	254695	255558	.	-	.	ID=gene290;Dbxref=GeneID:4807896;Name=ssaC;gbkey=Gene;gene=ssaC;gene_biotype=protein_coding;locus_tag=SSA_0261
NC_009009.1	RefSeq	CDS	254695	255558	.	-	0	ID=cds249;Parent=gene290;Dbxref=Genbank:YP_001034270.1,GeneID:4807896;Name=YP_001034270.1;Note=GC: 46.88%25%3B Transporter classification TC:3.A.1.15.2. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.729. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=ssaC;product=Mn/Zn ABC transporter permease;protein_id=YP_001034270.1;transl_table=11
NC_009009.1	RefSeq	gene	255545	256294	.	-	.	ID=gene291;Dbxref=GeneID:4807020;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=SSA_0262
NC_009009.1	RefSeq	CDS	255545	256294	.	-	0	ID=cds250;Parent=gene291;Dbxref=Genbank:YP_001034271.1,GeneID:4807020;Name=YP_001034271.1;Note=GC: 45.47%25%3B Transporter classification TC:3.A.1.15.2. Codon Adaptation Index (CAI): 0.783. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=ssaA;product=Mn/Zn ABC transporter ATPase;protein_id=YP_001034271.1;transl_table=11
NC_009009.1	RefSeq	gene	256414	258306	.	+	.	ID=gene292;Dbxref=GeneID:4807413;Name=pepO;gbkey=Gene;gene=pepO;gene_biotype=protein_coding;locus_tag=SSA_0263
NC_009009.1	RefSeq	CDS	256414	258306	.	+	0	ID=cds251;Parent=gene292;Dbxref=Genbank:YP_001034272.1,GeneID:4807413;Name=YP_001034272.1;Note=GC: 48.44%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): P. Manque;gbkey=CDS;gene=pepO;product=Zinc metalloproteinase in scaA 5'region;protein_id=YP_001034272.1;transl_table=11
NC_009009.1	RefSeq	gene	258540	259436	.	+	.	ID=gene293;Dbxref=GeneID:4807603;Name=SSA_0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0264
NC_009009.1	RefSeq	CDS	258540	259436	.	+	0	ID=cds252;Parent=gene293;Dbxref=Genbank:YP_001034273.1,GeneID:4807603;Name=YP_001034273.1;Note=GC: 49.16%25%3B Codon Adaptation Index (CAI): 0.779. Curator(s): P. Manque;gbkey=CDS;product=PEP phosphonomutase-like protein;protein_id=YP_001034273.1;transl_table=11
NC_009009.1	RefSeq	gene	259531	260067	.	+	.	ID=gene294;Dbxref=GeneID:4806619;Name=SSA_0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0265
NC_009009.1	RefSeq	CDS	259531	260067	.	+	0	ID=cds253;Parent=gene294;Dbxref=Genbank:YP_001034274.1,GeneID:4806619;Name=YP_001034274.1;Note=GC: 38.18%25%3B Codon Adaptation Index (CAI): 0.728. Helix-turn-helix prediction: AraC. Curator(s): P. Manque;gbkey=CDS;product=ORFA%2C transposon ISSsa1;protein_id=YP_001034274.1;transl_table=11
NC_009009.1	RefSeq	gene	260274	260882	.	+	.	ID=gene295;Dbxref=GeneID:4806883;Name=SSA_0266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0266
NC_009009.1	RefSeq	CDS	260274	260882	.	+	0	ID=cds254;Parent=gene295;Dbxref=Genbank:YP_001034275.1,GeneID:4806883;Name=YP_001034275.1;Note=GC: 39.74%25%3B Codon Adaptation Index (CAI): 0.767. Curator(s): P. Manque;gbkey=CDS;product=ORFB%2C transposon ISSsa1;protein_id=YP_001034275.1;transl_table=11
NC_009009.1	RefSeq	gene	260963	262159	.	-	.	ID=gene296;Dbxref=GeneID:4806447;Name=SSA_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0267
NC_009009.1	RefSeq	CDS	260963	262159	.	-	0	ID=cds255;Parent=gene296;Dbxref=Genbank:YP_001034276.1,GeneID:4806447;Name=YP_001034276.1;Note=GC: 46.78%25%3B Codon Adaptation Index (CAI): 0.767. Curator(s): P. Manque;gbkey=CDS;product=ROK family protein;protein_id=YP_001034276.1;transl_table=11
NC_009009.1	RefSeq	gene	262364	262681	.	+	.	ID=gene297;Dbxref=GeneID:4807810;Name=ptcB;gbkey=Gene;gene=ptcB;gene_biotype=protein_coding;locus_tag=SSA_0268
NC_009009.1	RefSeq	CDS	262364	262681	.	+	0	ID=cds256;Parent=gene297;Dbxref=Genbank:YP_001034277.1,GeneID:4807810;Name=YP_001034277.1;Note=GC: 48.43%25%3B Transporter classification TC:4.A.3.2.2. Codon Adaptation Index (CAI): 0.765. Curator(s): P. Manque;gbkey=CDS;gene=ptcB;product=PTS system cellobiose-specific transporter subunit IIB;protein_id=YP_001034277.1;transl_table=11
NC_009009.1	RefSeq	gene	262690	263007	.	+	.	ID=gene298;Dbxref=GeneID:4807257;Name=SSA_0269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0269
NC_009009.1	RefSeq	CDS	262690	263007	.	+	0	ID=cds257;Parent=gene298;Dbxref=Genbank:YP_001034278.1,GeneID:4807257;Name=YP_001034278.1;Note=GC: 44.34%25%3B Transporter classification TC:4.A.3.2.2. Codon Adaptation Index (CAI): 0.8. Curator(s): P. Manque;gbkey=CDS;product=PTS system cellobiose-specific transporter subunit IIA;protein_id=YP_001034278.1;transl_table=11
NC_009009.1	RefSeq	gene	263013	264374	.	+	.	ID=gene299;Dbxref=GeneID:4807107;Name=SSA_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0270
NC_009009.1	RefSeq	CDS	263013	264374	.	+	0	ID=cds258;Parent=gene299;Dbxref=Genbank:YP_001034279.1,GeneID:4807107;Name=YP_001034279.1;Note=GC: 46.11%25%3B Transporter classification TC:4.A.3.2.2. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.774. Curator(s): P. Manque;gbkey=CDS;product=PTS system cellobiose-specific transporter subunit IIC;protein_id=YP_001034279.1;transl_table=11
NC_009009.1	RefSeq	gene	264375	266153	.	+	.	ID=gene300;Dbxref=GeneID:4807748;Name=SSA_0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0271
NC_009009.1	RefSeq	CDS	264375	266153	.	+	0	ID=cds259;Parent=gene300;Dbxref=Genbank:YP_001034280.1,GeneID:4807748;Name=YP_001034280.1;Note=GC: 47.61%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): P. Manque;gbkey=CDS;product=glycosyl hydrolase family protein;protein_id=YP_001034280.1;transl_table=11
NC_009009.1	RefSeq	gene	266163	267092	.	+	.	ID=gene301;Dbxref=GeneID:4806966;Name=SSA_0272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0272
NC_009009.1	RefSeq	CDS	266163	267092	.	+	0	ID=cds260;Parent=gene301;Dbxref=Genbank:YP_001034281.1,GeneID:4806966;Name=YP_001034281.1;Note=GC: 48.92%25%3B Transporter classification TC:8.A.5.1.3. Codon Adaptation Index (CAI): 0.785. Possible K+ ion channel beta chain regulatory protein. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=aldo/keto reductase;protein_id=YP_001034281.1;transl_table=11
NC_009009.1	RefSeq	gene	267211	268626	.	+	.	ID=gene302;Dbxref=GeneID:4807587;Name=SSA_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0273
NC_009009.1	RefSeq	CDS	267211	268626	.	+	0	ID=cds261;Parent=gene302;Dbxref=Genbank:YP_001034282.1,GeneID:4807587;Name=YP_001034282.1;Note=GC: 50.99%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034282.1;transl_table=11
NC_009009.1	RefSeq	gene	268670	269647	.	-	.	ID=gene303;Dbxref=GeneID:4808002;Name=SSA_0274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0274
NC_009009.1	RefSeq	CDS	268670	269647	.	-	0	ID=cds262;Parent=gene303;Dbxref=Genbank:YP_001034283.1,GeneID:4808002;Name=YP_001034283.1;Note=GC: 44.99%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.765. SignalP prediction: Yes (prob. 0.515)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034283.1;transl_table=11
NC_009009.1	RefSeq	gene	269858	270727	.	+	.	ID=gene304;Dbxref=GeneID:4807508;Name=SSA_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0276
NC_009009.1	RefSeq	CDS	269858	270727	.	+	0	ID=cds263;Parent=gene304;Dbxref=Genbank:YP_001034284.1,GeneID:4807508;Name=YP_001034284.1;Note=GC: 47.01%25%3B Transporter classification TC:9.B.32.1.3. Codon Adaptation Index (CAI): 0.759. Curator(s): P. Manque;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_001034284.1;transl_table=11
NC_009009.1	RefSeq	gene	270798	271601	.	-	.	ID=gene305;Dbxref=GeneID:4807425;Name=SSA_0277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0277
NC_009009.1	RefSeq	CDS	270798	271601	.	-	0	ID=cds264;Parent=gene305;Dbxref=Genbank:YP_001034285.1,GeneID:4807425;Name=YP_001034285.1;Note=GC: 41.29%25%3B Codon Adaptation Index (CAI): 0.775. Curator(s): P. Manque;gbkey=CDS;product=pyruvate formate-lyase 3-activating protein;protein_id=YP_001034285.1;transl_table=11
NC_009009.1	RefSeq	gene	271699	272442	.	+	.	ID=gene306;Dbxref=GeneID:4807920;Name=SSA_0278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0278
NC_009009.1	RefSeq	CDS	271699	272442	.	+	0	ID=cds265;Parent=gene306;Dbxref=Genbank:YP_001034286.1,GeneID:4807920;Name=YP_001034286.1;Note=GC: 41.4%25%3B Codon Adaptation Index (CAI): 0.792. Helix-turn-helix prediction: AraC. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=sugar metabolism transcriptional repressor;protein_id=YP_001034286.1;transl_table=11
NC_009009.1	RefSeq	gene	272459	273430	.	+	.	ID=gene307;Dbxref=GeneID:4807711;Name=SSA_0279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0279
NC_009009.1	RefSeq	CDS	272459	273430	.	+	0	ID=cds266;Parent=gene307;Dbxref=Genbank:YP_001034287.1,GeneID:4807711;Name=YP_001034287.1;Note=GC: 42.28%25%3B Codon Adaptation Index (CAI): 0.772. Helix-turn-helix prediction: AraC. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=sugar-binding transcriptional repressor (DeoR);protein_id=YP_001034287.1;transl_table=11
NC_009009.1	RefSeq	gene	273544	274023	.	+	.	ID=gene308;Dbxref=GeneID:4807884;Name=SSA_0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0281
NC_009009.1	RefSeq	CDS	273544	274023	.	+	0	ID=cds267;Parent=gene308;Dbxref=Genbank:YP_001034288.1,GeneID:4807884;Name=YP_001034288.1;Note=GC: 35%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.726. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034288.1;transl_table=11
NC_009009.1	RefSeq	gene	274355	274678	.	+	.	ID=gene309;Dbxref=GeneID:4807746;Name=SSA_0282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0282
NC_009009.1	RefSeq	CDS	274355	274678	.	+	0	ID=cds268;Parent=gene309;Dbxref=Genbank:YP_001034289.1,GeneID:4807746;Name=YP_001034289.1;Note=GC: 40.43%25%3B Transporter classification TC:4.A.3.2.1. Codon Adaptation Index (CAI): 0.772. Helix-turn-helix prediction: AraC. Curator(s): P. Manque;gbkey=CDS;product=PTS system cellobiose-specific transporter subunit IIA;protein_id=YP_001034289.1;transl_table=11
NC_009009.1	RefSeq	gene	274699	275010	.	+	.	ID=gene310;Dbxref=GeneID:4806648;Name=SSA_0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0283
NC_009009.1	RefSeq	CDS	274699	275010	.	+	0	ID=cds269;Parent=gene310;Dbxref=Genbank:YP_001034290.1,GeneID:4806648;Name=YP_001034290.1;Note=GC: 42.95%25%3B Transporter classification TC:4.A.3.2.3. Codon Adaptation Index (CAI): 0.807. SignalP prediction: Yes (prob. 0.996)%3B Curator(s): P. Manque;gbkey=CDS;product=PTS system cellobiose-specific transporter subunit IIB;protein_id=YP_001034290.1;transl_table=11
NC_009009.1	RefSeq	gene	275028	276329	.	+	.	ID=gene311;Dbxref=GeneID:4806112;Name=ptcC;gbkey=Gene;gene=ptcC;gene_biotype=protein_coding;locus_tag=SSA_0284
NC_009009.1	RefSeq	CDS	275028	276329	.	+	0	ID=cds270;Parent=gene311;Dbxref=Genbank:YP_001034291.1,GeneID:4806112;Name=YP_001034291.1;Note=GC: 45.16%25%3B Transporter classification TC:4.A.3.2.2. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.776. Curator(s): P. Manque;gbkey=CDS;gene=ptcC;product=PTS system cellobiose-specific transporter subunit IIC;protein_id=YP_001034291.1;transl_table=11
NC_009009.1	RefSeq	gene	276498	278939	.	+	.	ID=gene312;Dbxref=GeneID:4806460;Name=SSA_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0285
NC_009009.1	RefSeq	CDS	276498	278939	.	+	0	ID=cds271;Parent=gene312;Dbxref=Genbank:YP_001034292.1,GeneID:4806460;Name=YP_001034292.1;Note=GC: 44.84%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): P. Manque;gbkey=CDS;product=formate acetyltransferase 3;protein_id=YP_001034292.1;transl_table=11
NC_009009.1	RefSeq	gene	278954	279622	.	+	.	ID=gene313;Dbxref=GeneID:4806680;Name=SSA_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0286
NC_009009.1	RefSeq	CDS	278954	279622	.	+	0	ID=cds272;Parent=gene313;Dbxref=Genbank:YP_001034293.1,GeneID:4806680;Name=YP_001034293.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=YP_001034293.1;transl_table=11
NC_009009.1	RefSeq	gene	279668	280762	.	+	.	ID=gene314;Dbxref=GeneID:4806770;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=SSA_0287
NC_009009.1	RefSeq	CDS	279668	280762	.	+	0	ID=cds273;Parent=gene314;Dbxref=Genbank:YP_001034294.1,GeneID:4806770;Name=YP_001034294.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;product=glycerol dehydrogenase;protein_id=YP_001034294.1;transl_table=11
NC_009009.1	RefSeq	gene	280830	281393	.	-	.	ID=gene315;Dbxref=GeneID:4806801;Name=SSA_0288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0288
NC_009009.1	RefSeq	CDS	280830	281393	.	-	0	ID=cds274;Parent=gene315;Dbxref=Genbank:YP_001034295.1,GeneID:4806801;Name=YP_001034295.1;Note=GC: 37.06%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.727. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034295.1;transl_table=11
NC_009009.1	RefSeq	gene	281546	284059	.	+	.	ID=gene316;Dbxref=GeneID:4806757;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SSA_0289
NC_009009.1	RefSeq	CDS	281546	284059	.	+	0	ID=cds275;Parent=gene316;Dbxref=Genbank:YP_001034296.1,GeneID:4806757;Name=YP_001034296.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=YP_001034296.1;transl_table=11
NC_009009.1	RefSeq	gene	284174	285319	.	-	.	ID=gene317;Dbxref=GeneID:4806617;Name=SSA_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0290
NC_009009.1	RefSeq	CDS	284174	285319	.	-	0	ID=cds276;Parent=gene317;Dbxref=Genbank:YP_001034297.1,GeneID:4806617;Name=YP_001034297.1;Note=GC: 40.84%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.756. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034297.1;transl_table=11
NC_009009.1	RefSeq	gene	285502	286329	.	+	.	ID=gene318;Dbxref=GeneID:4805877;Name=SSA_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0291
NC_009009.1	RefSeq	CDS	285502	286329	.	+	0	ID=cds277;Parent=gene318;Dbxref=Genbank:YP_001034298.1,GeneID:4805877;Name=YP_001034298.1;Note=GC: 42.63%25%3B Codon Adaptation Index (CAI): 0.829. LipoP prediction: SpI. Curator(s): P. Manque;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_001034298.1;transl_table=11
NC_009009.1	RefSeq	gene	286348	287322	.	+	.	ID=gene319;Dbxref=GeneID:4806736;Name=SSA_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0292
NC_009009.1	RefSeq	CDS	286348	287322	.	+	0	ID=cds278;Parent=gene319;Dbxref=Genbank:YP_001034299.1,GeneID:4806736;Name=YP_001034299.1;Note=GC: 43.59%25%3B Codon Adaptation Index (CAI): 0.77. Helix-turn-helix prediction: AraC. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_001034299.1;transl_table=11
NC_009009.1	RefSeq	gene	287446	287703	.	-	.	ID=gene320;Dbxref=GeneID:4808013;Name=SSA_0293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0293
NC_009009.1	RefSeq	CDS	287446	287703	.	-	0	ID=cds279;Parent=gene320;Dbxref=Genbank:YP_001034300.1,GeneID:4808013;Name=YP_001034300.1;Note=GC: 39.53%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034300.1;transl_table=11
NC_009009.1	RefSeq	gene	287862	287966	.	-	.	ID=gene321;Dbxref=GeneID:4806137;Name=SSA_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0294
NC_009009.1	RefSeq	CDS	287862	287966	.	-	0	ID=cds280;Parent=gene321;Dbxref=Genbank:YP_001034301.1,GeneID:4806137;Name=YP_001034301.1;Note=GC: 36.19%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034301.1;transl_table=11
NC_009009.1	RefSeq	gene	288116	288991	.	-	.	ID=gene322;Dbxref=GeneID:4806411;Name=mleR;gbkey=Gene;gene=mleR;gene_biotype=protein_coding;locus_tag=SSA_0295
NC_009009.1	RefSeq	CDS	288116	288991	.	-	0	ID=cds281;Parent=gene322;Dbxref=Genbank:YP_001034302.1,GeneID:4806411;Name=YP_001034302.1;Note=GC: 38.81%25%3B Codon Adaptation Index (CAI): 0.742. Helix-turn-helix prediction: LysR. Similar to malolactic fermentation system activator. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;gene=mleR;product=LysR family transcriptional regulator;protein_id=YP_001034302.1;transl_table=11
NC_009009.1	RefSeq	gene	289103	289453	.	-	.	ID=gene323;Dbxref=GeneID:4806582;Name=SSA_0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0296
NC_009009.1	RefSeq	CDS	289103	289453	.	-	0	ID=cds282;Parent=gene323;Dbxref=Genbank:YP_001034303.1,GeneID:4806582;Name=YP_001034303.1;Note=GC: 33.9%25%3B Codon Adaptation Index (CAI): 0.727. Curator(s): P. Manque %2C J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034303.1;transl_table=11
NC_009009.1	RefSeq	gene	289846	291471	.	+	.	ID=gene324;Dbxref=GeneID:4805803;Name=mleS;gbkey=Gene;gene=mleS;gene_biotype=protein_coding;locus_tag=SSA_0297
NC_009009.1	RefSeq	CDS	289846	291471	.	+	0	ID=cds283;Parent=gene324;Dbxref=Genbank:YP_001034304.1,GeneID:4805803;Name=YP_001034304.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;gene=mleS;product=malate dehydrogenase;protein_id=YP_001034304.1;transl_table=11
NC_009009.1	RefSeq	gene	291476	292507	.	+	.	ID=gene325;Dbxref=GeneID:4807187;Name=SSA_0298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0298
NC_009009.1	RefSeq	CDS	291476	292507	.	+	0	ID=cds284;Parent=gene325;Dbxref=Genbank:YP_001034305.1,GeneID:4807187;Name=YP_001034305.1;Note=GC: 40.5%25%3B Transporter classification TC:2.A.69.3.1. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.761. Curator(s): P. Manque;gbkey=CDS;product=malate permease;protein_id=YP_001034305.1;transl_table=11
NC_009009.1	RefSeq	gene	292899	293402	.	+	.	ID=gene326;Dbxref=GeneID:4807207;Name=SSA_0299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0299
NC_009009.1	RefSeq	CDS	292899	293402	.	+	0	ID=cds285;Parent=gene326;Dbxref=Genbank:YP_001034306.1,GeneID:4807207;Name=YP_001034306.1;Note=GC: 47.02%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.76. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034306.1;transl_table=11
NC_009009.1	RefSeq	gene	293559	294203	.	+	.	ID=gene327;Dbxref=GeneID:4806979;Name=SSA_0300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0300
NC_009009.1	RefSeq	CDS	293559	294203	.	+	0	ID=cds286;Parent=gene327;Dbxref=Genbank:YP_001034307.1,GeneID:4806979;Name=YP_001034307.1;Note=GC: 33.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.803. Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034307.1;transl_table=11
NC_009009.1	RefSeq	gene	294238	294813	.	+	.	ID=gene328;Dbxref=GeneID:4807165;Name=SSA_0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0301
NC_009009.1	RefSeq	CDS	294238	294813	.	+	0	ID=cds287;Parent=gene328;Dbxref=Genbank:YP_001034308.1,GeneID:4807165;Name=YP_001034308.1;Note=GC: 33.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.775. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034308.1;transl_table=11
NC_009009.1	RefSeq	gene	295030	296226	.	+	.	ID=gene329;Dbxref=GeneID:4806895;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=SSA_0302
NC_009009.1	RefSeq	CDS	295030	296226	.	+	0	ID=cds288;Parent=gene329;Dbxref=Genbank:YP_001034309.1,GeneID:4806895;Name=YP_001034309.1;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=YP_001034309.1;transl_table=11
NC_009009.1	RefSeq	gene	296591	301111	.	+	.	ID=gene330;Dbxref=GeneID:4807391;Name=sspC;gbkey=Gene;gene=sspC;gene_biotype=protein_coding;locus_tag=SSA_0303
NC_009009.1	RefSeq	CDS	296591	301111	.	+	0	ID=cds289;Parent=gene330;Dbxref=Genbank:YP_001034310.1,GeneID:4807391;Name=YP_001034310.1;Note=GC: 44.59%25%3B Codon Adaptation Index (CAI): 0.792. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): P. Manque %2C T. Kitten;gbkey=CDS;gene=sspC;product=surface protein C;protein_id=YP_001034310.1;transl_table=11
NC_009009.1	RefSeq	gene	301283	301948	.	+	.	ID=gene331;Dbxref=GeneID:4807396;Name=SSA_0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0304
NC_009009.1	RefSeq	CDS	301283	301948	.	+	0	ID=cds290;Parent=gene331;Dbxref=Genbank:YP_001034311.1,GeneID:4807396;Name=YP_001034311.1;Note=GC: 42.94%25%3B Codon Adaptation Index (CAI): 0.819. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=cell wall degradation protein;protein_id=YP_001034311.1;transl_table=11
NC_009009.1	RefSeq	gene	302125	302649	.	+	.	ID=gene332;Dbxref=GeneID:4807243;Name=SSA_0305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0305
NC_009009.1	RefSeq	CDS	302125	302649	.	+	0	ID=cds291;Parent=gene332;Dbxref=Genbank:YP_001034312.1,GeneID:4807243;Name=YP_001034312.1;Note=GC: 42.67%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.963)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034312.1;transl_table=11
NC_009009.1	RefSeq	gene	302730	303095	.	+	.	ID=gene333;Dbxref=GeneID:4808089;Name=glnR;gbkey=Gene;gene=glnR;gene_biotype=protein_coding;locus_tag=SSA_0306
NC_009009.1	RefSeq	CDS	302730	303095	.	+	0	ID=cds292;Parent=gene333;Dbxref=Genbank:YP_001034313.1,GeneID:4808089;Name=YP_001034313.1;Note=GC: 43.99%25%3B Codon Adaptation Index (CAI): 0.836. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=glnR;product=transcription regulator (glutamine synthetase repressor);protein_id=YP_001034313.1;transl_table=11
NC_009009.1	RefSeq	gene	303127	304473	.	+	.	ID=gene334;Dbxref=GeneID:4807442;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SSA_0307
NC_009009.1	RefSeq	CDS	303127	304473	.	+	0	ID=cds293;Parent=gene334;Dbxref=Genbank:YP_001034314.1,GeneID:4807442;Name=YP_001034314.1;Note=GC: 45.06%25%3B Codon Adaptation Index (CAI): 0.803. Curator(s): T. Kitten;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=YP_001034314.1;transl_table=11
NC_009009.1	RefSeq	gene	304525	304944	.	+	.	ID=gene335;Dbxref=GeneID:4807363;Name=SSA_0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0308
NC_009009.1	RefSeq	CDS	304525	304944	.	+	0	ID=cds294;Parent=gene335;Dbxref=Genbank:YP_001034315.1,GeneID:4807363;Name=YP_001034315.1;Note=GC: 39.76%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034315.1;transl_table=11
NC_009009.1	RefSeq	gene	305034	305453	.	+	.	ID=gene336;Dbxref=GeneID:4807942;Name=SSA_0309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0309
NC_009009.1	RefSeq	CDS	305034	305453	.	+	0	ID=cds295;Parent=gene336;Dbxref=Genbank:YP_001034316.1,GeneID:4807942;Name=YP_001034316.1;Note=GC: 39.76%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): T. Kitten;gbkey=CDS;product=glyoxalase/bleomycin resistance protein/dioxygenase;protein_id=YP_001034316.1;transl_table=11
NC_009009.1	RefSeq	gene	305446	306033	.	+	.	ID=gene337;Dbxref=GeneID:4807941;Name=SSA_0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0310
NC_009009.1	RefSeq	CDS	305446	306033	.	+	0	ID=cds296;Parent=gene337;Dbxref=Genbank:YP_001034317.1,GeneID:4807941;Name=YP_001034317.1;Note=GC: 40.14%25%3B Codon Adaptation Index (CAI): 0.782. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034317.1;transl_table=11
NC_009009.1	RefSeq	gene	306017	306763	.	+	.	ID=gene338;Dbxref=GeneID:4807574;Name=SSA_0311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0311
NC_009009.1	RefSeq	CDS	306017	306763	.	+	0	ID=cds297;Parent=gene338;Dbxref=Genbank:YP_001034318.1,GeneID:4807574;Name=YP_001034318.1;Note=GC: 41.63%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034318.1;transl_table=11
NC_009009.1	RefSeq	gene	306793	308475	.	-	.	ID=gene339;Dbxref=GeneID:4807965;Name=SSA_0312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0312
NC_009009.1	RefSeq	CDS	306793	308475	.	-	0	ID=cds298;Parent=gene339;Dbxref=Genbank:YP_001034319.1,GeneID:4807965;Name=YP_001034319.1;Note=GC: 48.9%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): T. Kitten;gbkey=CDS;product=metallo-beta-lactamase superfamily hydrolase;protein_id=YP_001034319.1;transl_table=11
NC_009009.1	RefSeq	gene	308479	308709	.	-	.	ID=gene340;Dbxref=GeneID:4807845;Name=SSA_0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0313
NC_009009.1	RefSeq	CDS	308479	308709	.	-	0	ID=cds299;Parent=gene340;Dbxref=Genbank:YP_001034320.1,GeneID:4807845;Name=YP_001034320.1;Note=GC: 41.13%25%3B Codon Adaptation Index (CAI): 0.813. Highly conserved%2C but so far Firmicutes specific. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034320.1;transl_table=11
NC_009009.1	RefSeq	gene	309057	310109	.	-	.	ID=gene341;Dbxref=GeneID:4808061;Name=wcaG;gbkey=Gene;gene=wcaG;gene_biotype=protein_coding;locus_tag=SSA_0314
NC_009009.1	RefSeq	CDS	309057	310109	.	-	0	ID=cds300;Parent=gene341;Dbxref=Genbank:YP_001034321.1,GeneID:4808061;Name=YP_001034321.1;Note=GC: 46.82%25%3B Codon Adaptation Index (CAI): 0.766. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=wcaG;product=nucleoside-diphosphate-sugar epimerase;protein_id=YP_001034321.1;transl_table=11
NC_009009.1	RefSeq	gene	310242	310706	.	+	.	ID=gene342;Dbxref=GeneID:4807643;Name=SSA_0315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0315
NC_009009.1	RefSeq	CDS	310242	310706	.	+	0	ID=cds301;Parent=gene342;Dbxref=Genbank:YP_001034322.1,GeneID:4807643;Name=YP_001034322.1;Note=GC: 46.45%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): T. Kitten;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_001034322.1;transl_table=11
NC_009009.1	RefSeq	gene	310716	311402	.	+	.	ID=gene343;Dbxref=GeneID:4805936;Name=SSA_0316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0316
NC_009009.1	RefSeq	CDS	310716	311402	.	+	0	ID=cds302;Parent=gene343;Dbxref=Genbank:YP_001034323.1,GeneID:4805936;Name=YP_001034323.1;Note=GC: 50.95%25%3B Codon Adaptation Index (CAI): 0.767. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034323.1;transl_table=11
NC_009009.1	RefSeq	gene	311399	311851	.	+	.	ID=gene344;Dbxref=GeneID:4805931;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=SSA_0317
NC_009009.1	RefSeq	CDS	311399	311851	.	+	0	ID=cds303;Parent=gene344;Dbxref=Genbank:YP_001034324.1,GeneID:4805931;Name=YP_001034324.1;Note=GC: 47.46%25%3B Codon Adaptation Index (CAI): 0.741. Curator(s): T. Kitten;gbkey=CDS;gene=rimI;product=ribosomal protein alanine acetyl transferase;protein_id=YP_001034324.1;transl_table=11
NC_009009.1	RefSeq	gene	311841	312851	.	+	.	ID=gene345;Dbxref=GeneID:4807667;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;locus_tag=SSA_0318
NC_009009.1	RefSeq	CDS	311841	312851	.	+	0	ID=cds304;Parent=gene345;Dbxref=Genbank:YP_001034325.1,GeneID:4807667;Name=YP_001034325.1;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;gbkey=CDS;gene=gcp;product=DNA-binding/iron metalloprotein/AP endonuclease;protein_id=YP_001034325.1;transl_table=11
NC_009009.1	RefSeq	gene	312861	313556	.	+	.	ID=gene346;Dbxref=GeneID:4805900;Name=SSA_0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0319
NC_009009.1	RefSeq	CDS	312861	313556	.	+	0	ID=cds305;Parent=gene346;Dbxref=Genbank:YP_001034326.1,GeneID:4805900;Name=YP_001034326.1;Note=GC: 46.7%25%3B Transporter classification TC:2.A.78.1.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.761. Curator(s): T. Kitten;gbkey=CDS;product=branched-chain amino acid permease;protein_id=YP_001034326.1;transl_table=11
NC_009009.1	RefSeq	gene	313546	313884	.	+	.	ID=gene347;Dbxref=GeneID:4806285;Name=SSA_0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0320
NC_009009.1	RefSeq	CDS	313546	313884	.	+	0	ID=cds306;Parent=gene347;Dbxref=Genbank:YP_001034327.1,GeneID:4806285;Name=YP_001034327.1;Note=GC: 41.89%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.768. SignalP prediction: Yes (prob. 0.536)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034327.1;transl_table=11
NC_009009.1	RefSeq	gene	314007	314753	.	+	.	ID=gene348;Dbxref=GeneID:4806208;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=SSA_0321
NC_009009.1	RefSeq	CDS	314007	314753	.	+	0	ID=cds307;Parent=gene348;Dbxref=Genbank:YP_001034328.1,GeneID:4806208;Name=YP_001034328.1;Note=GC: 44.44%25%3B Codon Adaptation Index (CAI): 0.81. Possibly involved in ubiquinone/ menaquinone biosynthesis. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=ubiE;product=methylase;protein_id=YP_001034328.1;transl_table=11
NC_009009.1	RefSeq	gene	314857	315594	.	+	.	ID=gene349;Dbxref=GeneID:4806455;Name=SSA_0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0322
NC_009009.1	RefSeq	CDS	314857	315594	.	+	0	ID=cds308;Parent=gene349;Dbxref=Genbank:YP_001034329.1,GeneID:4806455;Name=YP_001034329.1;Note=GC: 43.77%25%3B Codon Adaptation Index (CAI): 0.79. Helix-turn-helix prediction: AraC. Response to antibiotics or oxygen radicals. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=TipA family transcription regulator;protein_id=YP_001034329.1;transl_table=11
NC_009009.1	RefSeq	gene	315714	316889	.	-	.	ID=gene350;Dbxref=GeneID:4806440;Name=SSA_0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0323
NC_009009.1	RefSeq	CDS	315714	316889	.	-	0	ID=cds309;Parent=gene350;Dbxref=Genbank:YP_001034330.1,GeneID:4806440;Name=YP_001034330.1;Note=GC: 50.26%25%3B Codon Adaptation Index (CAI): 0.75. Curator(s): T. Kitten;gbkey=CDS;product=flavoprotein;protein_id=YP_001034330.1;transl_table=11
NC_009009.1	RefSeq	gene	317159	317653	.	+	.	ID=gene351;Dbxref=GeneID:4805805;Name=SSA_0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0324
NC_009009.1	RefSeq	CDS	317159	317653	.	+	0	ID=cds310;Parent=gene351;Dbxref=Genbank:YP_001034331.1,GeneID:4805805;Name=YP_001034331.1;Note=GC: 46.87%25%3B Codon Adaptation Index (CAI): 0.852. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034331.1;transl_table=11
NC_009009.1	RefSeq	gene	317743	319497	.	+	.	ID=gene352;Dbxref=GeneID:4806128;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=SSA_0325
NC_009009.1	RefSeq	CDS	317743	319497	.	+	0	ID=cds311;Parent=gene352;Dbxref=Genbank:YP_001034332.1,GeneID:4806128;Name=YP_001034332.1;Note=GC: 44.84%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.752. SignalP prediction: Yes (prob. 0.982)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=ugpQ;product=membrane-anchored glycerophosphoryl diester phosphodiesterase;protein_id=YP_001034332.1;transl_table=11
NC_009009.1	RefSeq	gene	319614	319913	.	-	.	ID=gene353;Dbxref=GeneID:4806344;Name=SSA_0326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0326
NC_009009.1	RefSeq	CDS	319614	319913	.	-	0	ID=cds312;Parent=gene353;Dbxref=Genbank:YP_001034333.1,GeneID:4806344;Name=YP_001034333.1;Note=GC: 44%25%3B Codon Adaptation Index (CAI): 0.829. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034333.1;transl_table=11
NC_009009.1	RefSeq	gene	320119	320496	.	+	.	ID=gene354;Dbxref=GeneID:4805804;Name=SSA_0327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0327
NC_009009.1	RefSeq	CDS	320119	320496	.	+	0	ID=cds313;Parent=gene354;Dbxref=Genbank:YP_001034334.1,GeneID:4805804;Name=YP_001034334.1;Note=GC: 38.62%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): T. Kitten;gbkey=CDS;product=glycosyltransferase;protein_id=YP_001034334.1;transl_table=11
NC_009009.1	RefSeq	gene	320577	322865	.	-	.	ID=gene355;Dbxref=GeneID:4806593;Name=pepXP;gbkey=Gene;gene=pepXP;gene_biotype=protein_coding;locus_tag=SSA_0328
NC_009009.1	RefSeq	CDS	320577	322865	.	-	0	ID=cds314;Parent=gene355;Dbxref=Genbank:YP_001034335.1,GeneID:4806593;Name=YP_001034335.1;Note=catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue;gbkey=CDS;gene=pepXP;product=x-prolyl-dipeptidyl aminopeptidase;protein_id=YP_001034335.1;transl_table=11
NC_009009.1	RefSeq	gene	322970	323875	.	+	.	ID=gene356;Dbxref=GeneID:4806537;Name=SSA_0329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0329
NC_009009.1	RefSeq	CDS	322970	323875	.	+	0	ID=cds315;Parent=gene356;Dbxref=Genbank:YP_001034336.1,GeneID:4806537;Name=YP_001034336.1;Note=GC: 45.81%25%3B Transporter classification TC:1.A.8.2.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. Curator(s): T. Kitten;gbkey=CDS;product=glycerol uptake facilitator/aquaporin protein;protein_id=YP_001034336.1;transl_table=11
NC_009009.1	RefSeq	gene	323939	325222	.	+	.	ID=gene357;Dbxref=GeneID:4807505;Name=SSA_0330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0330
NC_009009.1	RefSeq	CDS	323939	325222	.	+	0	ID=cds316;Parent=gene357;Dbxref=Genbank:YP_001034337.1,GeneID:4807505;Name=YP_001034337.1;Note=GC: 42.45%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034337.1;transl_table=11
NC_009009.1	RefSeq	gene	325318	326052	.	+	.	ID=gene358;Dbxref=GeneID:4807806;Name=cppA;gbkey=Gene;gene=cppA;gene_biotype=protein_coding;locus_tag=SSA_0331
NC_009009.1	RefSeq	CDS	325318	326052	.	+	0	ID=cds317;Parent=gene358;Dbxref=Genbank:YP_001034338.1,GeneID:4807806;Name=YP_001034338.1;Note=GC: 42.45%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): T. Kitten;gbkey=CDS;gene=cppA;product=C3-degrading proteinase;protein_id=YP_001034338.1;transl_table=11
NC_009009.1	RefSeq	gene	326049	326984	.	+	.	ID=gene359;Dbxref=GeneID:4807309;Name=SSA_0332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0332
NC_009009.1	RefSeq	CDS	326049	326984	.	+	0	ID=cds318;Parent=gene359;Dbxref=Genbank:YP_001034339.1,GeneID:4807309;Name=YP_001034339.1;Note=GC: 47.22%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034339.1;transl_table=11
NC_009009.1	RefSeq	gene	327135	328013	.	+	.	ID=gene360;Dbxref=GeneID:4808038;Name=mvaK1;gbkey=Gene;gene=mvaK1;gene_biotype=protein_coding;locus_tag=SSA_0333
NC_009009.1	RefSeq	CDS	327135	328013	.	+	0	ID=cds319;Parent=gene360;Dbxref=Genbank:YP_001034340.1,GeneID:4808038;Name=YP_001034340.1;Note=GC: 49.37%25%3B Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten;gbkey=CDS;gene=mvaK1;product=mevalonate kinase;protein_id=YP_001034340.1;transl_table=11
NC_009009.1	RefSeq	gene	327995	328942	.	+	.	ID=gene361;Dbxref=GeneID:4806421;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=SSA_0334
NC_009009.1	RefSeq	CDS	327995	328942	.	+	0	ID=cds320;Parent=gene361;Dbxref=Genbank:YP_001034341.1,GeneID:4806421;Name=YP_001034341.1;Note=GC: 47.78%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): T. Kitten;gbkey=CDS;gene=mvaD;product=diphosphomevalonate decarboxylase;protein_id=YP_001034341.1;transl_table=11
NC_009009.1	RefSeq	gene	328932	329951	.	+	.	ID=gene362;Dbxref=GeneID:4807924;Name=mvaK2;gbkey=Gene;gene=mvaK2;gene_biotype=protein_coding;locus_tag=SSA_0335
NC_009009.1	RefSeq	CDS	328932	329951	.	+	0	ID=cds321;Parent=gene362;Dbxref=Genbank:YP_001034342.1,GeneID:4807924;Name=YP_001034342.1;Note=GC: 47.55%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.767. Curator(s): T. Kitten;gbkey=CDS;gene=mvaK2;product=phosphomevalonate kinase;protein_id=YP_001034342.1;transl_table=11
NC_009009.1	RefSeq	gene	329932	330939	.	+	.	ID=gene363;Dbxref=GeneID:4808082;Name=SSA_0336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0336
NC_009009.1	RefSeq	CDS	329932	330939	.	+	0	ID=cds322;Parent=gene363;Dbxref=Genbank:YP_001034343.1,GeneID:4808082;Name=YP_001034343.1;Note=catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate;gbkey=CDS;product=isopentenyl pyrophosphate isomerase;protein_id=YP_001034343.1;transl_table=11
NC_009009.1	RefSeq	gene	330979	332253	.	-	.	ID=gene364;Dbxref=GeneID:4807932;Name=mvaA;gbkey=Gene;gene=mvaA;gene_biotype=protein_coding;locus_tag=SSA_0337
NC_009009.1	RefSeq	CDS	330979	332253	.	-	0	ID=cds323;Parent=gene364;Dbxref=Genbank:YP_001034344.1,GeneID:4807932;Name=YP_001034344.1;Note=GC: 50.43%25%3B Codon Adaptation Index (CAI): 0.759. Curator(s): T. Kitten;gbkey=CDS;gene=mvaA;product=hydroxymethylglutaryl-CoA reductase;protein_id=YP_001034344.1;transl_table=11
NC_009009.1	RefSeq	gene	332250	333428	.	-	.	ID=gene365;Dbxref=GeneID:4806115;Name=mvaS;gbkey=Gene;gene=mvaS;gene_biotype=protein_coding;locus_tag=SSA_0338
NC_009009.1	RefSeq	CDS	332250	333428	.	-	0	ID=cds324;Parent=gene365;Dbxref=Genbank:YP_001034345.1,GeneID:4806115;Name=YP_001034345.1;Note=GC: 47.16%25%3B Codon Adaptation Index (CAI): 0.76. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;gene=mvaS;product=hydroxymethylglutaryl-CoA synthase;protein_id=YP_001034345.1;transl_table=11
NC_009009.1	RefSeq	gene	333573	334040	.	-	.	ID=gene366;Dbxref=GeneID:4807732;Name=SSA_0339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0339
NC_009009.1	RefSeq	CDS	333573	334040	.	-	0	ID=cds325;Parent=gene366;Dbxref=Genbank:YP_001034346.1,GeneID:4807732;Name=YP_001034346.1;Note=GC: 47.86%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.738. SignalP prediction: Yes (prob. 0.482)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034346.1;transl_table=11
NC_009009.1	RefSeq	gene	334045	334821	.	-	.	ID=gene367;Dbxref=GeneID:4806175;Name=SSA_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0341
NC_009009.1	RefSeq	CDS	334045	334821	.	-	0	ID=cds326;Parent=gene367;Dbxref=Genbank:YP_001034347.1,GeneID:4806175;Name=YP_001034347.1;Note=GC: 47.23%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.748. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034347.1;transl_table=11
NC_009009.1	RefSeq	gene	334981	337296	.	-	.	ID=gene368;Dbxref=GeneID:4806840;Name=SSA_0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0342
NC_009009.1	RefSeq	CDS	334981	337296	.	-	0	ID=cds327;Parent=gene368;Dbxref=Genbank:YP_001034348.1,GeneID:4806840;Name=YP_001034348.1;Note=GC: 44.39%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): T. Kitten;gbkey=CDS;product=pyruvate formate-lyase;protein_id=YP_001034348.1;transl_table=11
NC_009009.1	RefSeq	gene	337665	338729	.	+	.	ID=gene369;Dbxref=GeneID:4806842;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=SSA_0343
NC_009009.1	RefSeq	CDS	337665	338729	.	+	0	ID=cds328;Parent=gene369;Dbxref=Genbank:YP_001034349.1,GeneID:4806842;Name=YP_001034349.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;gene=dinP;product=DNA polymerase IV;protein_id=YP_001034349.1;transl_table=11
NC_009009.1	RefSeq	gene	338943	339269	.	+	.	ID=gene370;Dbxref=GeneID:4806828;Name=SSA_0345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0345
NC_009009.1	RefSeq	CDS	338943	339269	.	+	0	ID=cds329;Parent=gene370;Dbxref=Genbank:YP_001034350.1,GeneID:4806828;Name=YP_001034350.1;Note=GC: 47.09%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.768. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034350.1;transl_table=11
NC_009009.1	RefSeq	gene	339588	340382	.	+	.	ID=gene371;Dbxref=GeneID:4806371;Name=SSA_0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0346
NC_009009.1	RefSeq	CDS	339588	340382	.	+	0	ID=cds330;Parent=gene371;Dbxref=Genbank:YP_001034351.1,GeneID:4806371;Name=YP_001034351.1;Note=GC: 51.82%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034351.1;transl_table=11
NC_009009.1	RefSeq	gene	340428	341174	.	+	.	ID=gene372;Dbxref=GeneID:4806621;Name=SSA_0348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0348
NC_009009.1	RefSeq	CDS	340428	341174	.	+	0	ID=cds331;Parent=gene372;Dbxref=Genbank:YP_001034352.1,GeneID:4806621;Name=YP_001034352.1;Note=GC: 49.8%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.727. Curator(s): T. Kitten;gbkey=CDS;product=CAAX amino protease;protein_id=YP_001034352.1;transl_table=11
NC_009009.1	RefSeq	gene	341250	341888	.	+	.	ID=gene373;Dbxref=GeneID:4806022;Name=SSA_0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0349
NC_009009.1	RefSeq	CDS	341250	341888	.	+	0	ID=cds332;Parent=gene373;Dbxref=Genbank:YP_001034353.1,GeneID:4806022;Name=YP_001034353.1;Note=GC: 49.14%25%3B Codon Adaptation Index (CAI): 0.786. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001034353.1;transl_table=11
NC_009009.1	RefSeq	gene	341942	344308	.	-	.	ID=gene374;Dbxref=GeneID:4806560;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=SSA_0350
NC_009009.1	RefSeq	CDS	341942	344308	.	-	0	ID=cds333;Parent=gene374;Dbxref=Genbank:YP_001034354.1,GeneID:4806560;Name=YP_001034354.1;Note=GC: 47.61%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): T. Kitten;gbkey=CDS;gene=recD;product=helicase;protein_id=YP_001034354.1;transl_table=11
NC_009009.1	RefSeq	gene	344368	344997	.	-	.	ID=gene375;Dbxref=GeneID:4806368;Name=spi;gbkey=Gene;gene=spi;gene_biotype=protein_coding;locus_tag=SSA_0351
NC_009009.1	RefSeq	CDS	344368	344997	.	-	0	ID=cds334;Parent=gene375;Dbxref=Genbank:YP_001034355.1,GeneID:4806368;Name=YP_001034355.1;Note=GC: 45.56%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.781. SignalP prediction: Yes (prob. 0.646)%3B Curator(s): T. Kitten;gbkey=CDS;gene=spi;product=Signal peptidase I;protein_id=YP_001034355.1;transl_table=11
NC_009009.1	RefSeq	gene	345001	345969	.	-	.	ID=gene376;Dbxref=GeneID:4806557;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=SSA_0352
NC_009009.1	RefSeq	CDS	345001	345969	.	-	0	ID=cds335;Parent=gene376;Dbxref=Genbank:YP_001034356.1,GeneID:4806557;Name=YP_001034356.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhC;product=ribonuclease HIII;protein_id=YP_001034356.1;transl_table=11
NC_009009.1	RefSeq	gene	346080	346370	.	+	.	ID=gene377;Dbxref=GeneID:4806688;Name=SSA_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0353
NC_009009.1	RefSeq	CDS	346080	346370	.	+	0	ID=cds336;Parent=gene377;Dbxref=Genbank:YP_001034357.1,GeneID:4806688;Name=YP_001034357.1;Note=GC: 38.83%25%3B Codon Adaptation Index (CAI): 0.762. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034357.1;transl_table=11
NC_009009.1	RefSeq	gene	346381	346932	.	+	.	ID=gene378;Dbxref=GeneID:4807803;Name=SSA_0354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0354
NC_009009.1	RefSeq	CDS	346381	346932	.	+	0	ID=cds337;Parent=gene378;Dbxref=Genbank:YP_001034358.1,GeneID:4807803;Name=YP_001034358.1;Note=GC: 44.02%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.782. Required for colicin V production. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034358.1;transl_table=11
NC_009009.1	RefSeq	gene	346987	349320	.	+	.	ID=gene379;Dbxref=GeneID:4807531;Name=mutS2;gbkey=Gene;gene=mutS2;gene_biotype=protein_coding;locus_tag=SSA_0355
NC_009009.1	RefSeq	CDS	346987	349320	.	+	0	ID=cds338;Parent=gene379;Dbxref=Genbank:YP_001034359.1,GeneID:4807531;Name=YP_001034359.1;Note=GC: 49.4%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten;gbkey=CDS;gene=mutS2;product=DNA mismatch repair protein;protein_id=YP_001034359.1;transl_table=11
NC_009009.1	RefSeq	gene	349399	350817	.	+	.	ID=gene380;Dbxref=GeneID:4806652;Name=SSA_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0356
NC_009009.1	RefSeq	CDS	349399	350817	.	+	0	ID=cds339;Parent=gene380;Dbxref=Genbank:YP_001034360.1,GeneID:4806652;Name=YP_001034360.1;Note=GC: 47.99%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): T. Kitten;gbkey=CDS;product=dipeptidase;protein_id=YP_001034360.1;transl_table=11
NC_009009.1	RefSeq	gene	350903	351217	.	+	.	ID=gene381;Dbxref=GeneID:4806138;Name=SSA_0357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0357
NC_009009.1	RefSeq	CDS	350903	351217	.	+	0	ID=cds340;Parent=gene381;Dbxref=Genbank:YP_001034361.1,GeneID:4806138;Name=YP_001034361.1;Note=GC: 45.71%25%3B Codon Adaptation Index (CAI): 0.802. Curator(s): T. Kitten;gbkey=CDS;product=thioredoxin;protein_id=YP_001034361.1;transl_table=11
NC_009009.1	RefSeq	gene	351378	351887	.	-	.	ID=gene382;Dbxref=GeneID:4806230;Name=SSA_0358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0358
NC_009009.1	RefSeq	CDS	351378	351887	.	-	0	ID=cds341;Parent=gene382;Dbxref=Genbank:YP_001034362.1,GeneID:4806230;Name=YP_001034362.1;Note=GC: 30.59%25%3B Codon Adaptation Index (CAI): 0.79. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034362.1;transl_table=11
NC_009009.1	RefSeq	gene	352327	352743	.	+	.	ID=gene383;Dbxref=GeneID:4807041;Name=SSA_0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0359
NC_009009.1	RefSeq	CDS	352327	352743	.	+	0	ID=cds342;Parent=gene383;Dbxref=Genbank:YP_001034363.1,GeneID:4807041;Name=YP_001034363.1;Note=GC: 32.37%25%3B Codon Adaptation Index (CAI): 0.736. Curator(s): T. Kitten;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_001034363.1;transl_table=11
NC_009009.1	RefSeq	gene	352844	353251	.	+	.	ID=gene384;Dbxref=GeneID:4806861;Name=SSA_0360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0360
NC_009009.1	RefSeq	CDS	352844	353251	.	+	0	ID=cds343;Parent=gene384;Dbxref=Genbank:YP_001034364.1,GeneID:4806861;Name=YP_001034364.1;Note=GC: 34.8%25%3B Codon Adaptation Index (CAI): 0.81. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034364.1;transl_table=11
NC_009009.1	RefSeq	gene	353430	353654	.	+	.	ID=gene385;Dbxref=GeneID:4807048;Name=SSA_0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0362
NC_009009.1	RefSeq	CDS	353430	353654	.	+	0	ID=cds344;Parent=gene385;Dbxref=Genbank:YP_001034365.1,GeneID:4807048;Name=YP_001034365.1;Note=GC: 44.44%25%3B Codon Adaptation Index (CAI): 0.8. Possibly an incomplete product. Curator(s): T. Kitten;gbkey=CDS;product=thioredoxin;protein_id=YP_001034365.1;transl_table=11
NC_009009.1	RefSeq	gene	353998	355335	.	+	.	ID=gene386;Dbxref=GeneID:4806888;Name=dagA;gbkey=Gene;gene=dagA;gene_biotype=protein_coding;locus_tag=SSA_0363
NC_009009.1	RefSeq	CDS	353998	355335	.	+	0	ID=cds345;Parent=gene386;Dbxref=Genbank:YP_001034366.1,GeneID:4806888;Name=YP_001034366.1;Note=GC: 49.7%25%3B Transporter classification TC:2.A.25.1.1. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.745. Curator(s): T. Kitten;gbkey=CDS;gene=dagA;product=D-alanine/glycine/Na permease;protein_id=YP_001034366.1;transl_table=11
NC_009009.1	RefSeq	gene	355401	356438	.	-	.	ID=gene387;Dbxref=GeneID:4807294;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=SSA_0364
NC_009009.1	RefSeq	CDS	355401	356438	.	-	0	ID=cds346;Parent=gene387;Dbxref=Genbank:YP_001034367.1,GeneID:4807294;Name=YP_001034367.1;Note=involved in the import of serine and threonine coupled with the import of sodium;gbkey=CDS;gene=dctA;product=serine/threonine transporter SstT;protein_id=YP_001034367.1;transl_table=11
NC_009009.1	RefSeq	gene	356761	357624	.	+	.	ID=gene388;Dbxref=GeneID:4806978;Name=SSA_0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0365
NC_009009.1	RefSeq	CDS	356761	357624	.	+	0	ID=cds347;Parent=gene388;Dbxref=Genbank:YP_001034368.1,GeneID:4806978;Name=YP_001034368.1;Note=GC: 46.06%25%3B Transporter classification TC:1.A.23.3.1. Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.748. Curator(s): T. Kitten;gbkey=CDS;product=small-conductance mechanosensitive efflux channel;protein_id=YP_001034368.1;transl_table=11
NC_009009.1	RefSeq	gene	357646	358272	.	+	.	ID=gene389;Dbxref=GeneID:4806921;Name=SSA_0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0366
NC_009009.1	RefSeq	CDS	357646	358272	.	+	0	ID=cds348;Parent=gene389;Dbxref=Genbank:YP_001034369.1,GeneID:4806921;Name=YP_001034369.1;Note=GC: 43.06%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034369.1;transl_table=11
NC_009009.1	RefSeq	gene	358449	359351	.	+	.	ID=gene390;Dbxref=GeneID:4806968;Name=SSA_0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0367
NC_009009.1	RefSeq	CDS	358449	359351	.	+	0	ID=cds349;Parent=gene390;Dbxref=Genbank:YP_001034370.1,GeneID:4806968;Name=YP_001034370.1;Note=GC: 43.08%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): T. Kitten%3B (possible metalloprotease);gbkey=CDS;product=hypothetical protein;protein_id=YP_001034370.1;transl_table=11
NC_009009.1	RefSeq	gene	359414	359782	.	+	.	ID=gene391;Dbxref=GeneID:4807169;Name=SSA_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0368
NC_009009.1	RefSeq	CDS	359414	359782	.	+	0	ID=cds350;Parent=gene391;Dbxref=Genbank:YP_001034371.1,GeneID:4807169;Name=YP_001034371.1;Note=GC: 36.59%25%3B Codon Adaptation Index (CAI): 0.793. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034371.1;transl_table=11
NC_009009.1	RefSeq	gene	359813	359986	.	-	.	ID=gene392;Dbxref=GeneID:4807404;Name=SSA_0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0369
NC_009009.1	RefSeq	CDS	359813	359986	.	-	0	ID=cds351;Parent=gene392;Dbxref=Genbank:YP_001034372.1,GeneID:4807404;Name=YP_001034372.1;Note=GC: 41.38%25%3B Codon Adaptation Index (CAI): 0.772. Possibly incomplete product. Curator(s): T. Kitten;gbkey=CDS;product=NADP-specific glutamate dehydrogenase;protein_id=YP_001034372.1;transl_table=11
NC_009009.1	RefSeq	gene	359987	360472	.	-	.	ID=gene393;Dbxref=GeneID:4806942;Name=SSA_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0370
NC_009009.1	RefSeq	CDS	359987	360472	.	-	0	ID=cds352;Parent=gene393;Dbxref=Genbank:YP_001034373.1,GeneID:4806942;Name=YP_001034373.1;Note=GC: 45.68%25%3B Codon Adaptation Index (CAI): 0.738. Curator(s): T. Kitten;gbkey=CDS;product=acetyltransferase;protein_id=YP_001034373.1;transl_table=11
NC_009009.1	RefSeq	gene	360503	361849	.	-	.	ID=gene394;Dbxref=GeneID:4806972;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=SSA_0371
NC_009009.1	RefSeq	CDS	360503	361849	.	-	0	ID=cds353;Parent=gene394;Dbxref=Genbank:YP_001034374.1,GeneID:4806972;Name=YP_001034374.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;gene=gdhA;product=glutamate dehydrogenase;protein_id=YP_001034374.1;transl_table=11
NC_009009.1	RefSeq	gene	362202	363140	.	+	.	ID=gene395;Dbxref=GeneID:4807019;Name=pyrDA;gbkey=Gene;gene=pyrDA;gene_biotype=protein_coding;locus_tag=SSA_0373
NC_009009.1	RefSeq	CDS	362202	363140	.	+	0	ID=cds354;Parent=gene395;Dbxref=Genbank:YP_001034375.1,GeneID:4807019;Name=YP_001034375.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B subclass 1A is a dimer formed by two identical PyrD subunits each containing an FMN group;gbkey=CDS;gene=pyrDA;product=dihydroorotate dehydrogenase 1A;protein_id=YP_001034375.1;transl_table=11
NC_009009.1	RefSeq	gene	363303	364238	.	+	.	ID=gene396;Dbxref=GeneID:4807036;Name=SSA_0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0374
NC_009009.1	RefSeq	CDS	363303	364238	.	+	0	ID=cds355;Parent=gene396;Dbxref=Genbank:YP_001034376.1,GeneID:4807036;Name=YP_001034376.1;Note=GC: 48.72%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=peptide methionine sulfoxide reductase msrA/msrB;protein_id=YP_001034376.1;transl_table=11
NC_009009.1	RefSeq	gene	364397	365269	.	+	.	ID=gene397;Dbxref=GeneID:4807078;Name=SSA_0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0375
NC_009009.1	RefSeq	CDS	364397	365269	.	+	0	ID=cds356;Parent=gene397;Dbxref=Genbank:YP_001034377.1,GeneID:4807078;Name=YP_001034377.1;Note=GC: 41.92%25%3B Transporter classification TC:3.A.1.24.1. Codon Adaptation Index (CAI): 0.79. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=lipoprotein transporter;protein_id=YP_001034377.1;transl_table=11
NC_009009.1	RefSeq	gene	365519	366586	.	+	.	ID=gene398;Dbxref=GeneID:4806964;Name=SSA_0376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0376
NC_009009.1	RefSeq	CDS	365519	366586	.	+	0	ID=cds357;Parent=gene398;Dbxref=Genbank:YP_001034378.1,GeneID:4806964;Name=YP_001034378.1;Note=GC: 43.91%25%3B Transporter classification TC:3.A.1.24.2. Codon Adaptation Index (CAI): 0.776. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=methionine ABC transporter ATPase;protein_id=YP_001034378.1;transl_table=11
NC_009009.1	RefSeq	gene	366586	367278	.	+	.	ID=gene399;Dbxref=GeneID:4805827;Name=SSA_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0377
NC_009009.1	RefSeq	CDS	366586	367278	.	+	0	ID=cds358;Parent=gene399;Dbxref=Genbank:YP_001034379.1,GeneID:4805827;Name=YP_001034379.1;Note=GC: 47.33%25%3B Transporter classification TC:3.A.1.24.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.764. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=methionine ABC transporter permease;protein_id=YP_001034379.1;transl_table=11
NC_009009.1	RefSeq	gene	367416	368687	.	+	.	ID=gene400;Dbxref=GeneID:4805840;Name=SSA_0378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0378
NC_009009.1	RefSeq	CDS	367416	368687	.	+	0	ID=cds359;Parent=gene400;Dbxref=Genbank:YP_001034380.1,GeneID:4805840;Name=YP_001034380.1;Note=GC: 49.29%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten;gbkey=CDS;product=chlorohydrolase;protein_id=YP_001034380.1;transl_table=11
NC_009009.1	RefSeq	gene	368962	370893	.	+	.	ID=gene401;Dbxref=GeneID:4805973;Name=SSA_0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0379
NC_009009.1	RefSeq	CDS	368962	370893	.	+	0	ID=cds360;Parent=gene401;Dbxref=Genbank:YP_001034381.1,GeneID:4805973;Name=YP_001034381.1;Note=GC: 44.98%25%3B Transporter classification TC:4.A.1.2.6. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.805. Curator(s): T. Kitten;gbkey=CDS;product=PTS system beta-glucoside-specific transporter subunit EII;protein_id=YP_001034381.1;transl_table=11
NC_009009.1	RefSeq	gene	371056	372438	.	+	.	ID=gene402;Dbxref=GeneID:4806649;Name=SSA_0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0380
NC_009009.1	RefSeq	CDS	371056	372438	.	+	0	ID=cds361;Parent=gene402;Dbxref=Genbank:YP_001034382.1,GeneID:4806649;Name=YP_001034382.1;Note=GC: 46.71%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.788. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=enzyme of poly-gamma-glutamate biosynthesis (capsule formation);protein_id=YP_001034382.1;transl_table=11
NC_009009.1	RefSeq	gene	372903	373574	.	+	.	ID=gene403;Dbxref=GeneID:4806110;Name=SSA_0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0381
NC_009009.1	RefSeq	CDS	372903	373574	.	+	0	ID=cds362;Parent=gene403;Dbxref=Genbank:YP_001034383.1,GeneID:4806110;Name=YP_001034383.1;Note=GC: 32.89%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.737. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034383.1;transl_table=11
NC_009009.1	RefSeq	gene	373690	374562	.	-	.	ID=gene404;Dbxref=GeneID:4805960;Name=SSA_0382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0382
NC_009009.1	RefSeq	CDS	373690	374562	.	-	0	ID=cds363;Parent=gene404;Dbxref=Genbank:YP_001034384.1,GeneID:4805960;Name=YP_001034384.1;Note=GC: 45.13%25%3B Codon Adaptation Index (CAI): 0.758. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_001034384.1;transl_table=11
NC_009009.1	RefSeq	gene	374674	376113	.	+	.	ID=gene405;Dbxref=GeneID:4806549;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=SSA_0383
NC_009009.1	RefSeq	CDS	374674	376113	.	+	0	ID=cds364;Parent=gene405;Dbxref=Genbank:YP_001034385.1,GeneID:4806549;Name=YP_001034385.1;Note=GC: 48.06%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): T. Kitten;gbkey=CDS;gene=bglA;product=Beta-glucosidase;protein_id=YP_001034385.1;transl_table=11
NC_009009.1	RefSeq	gene	376380	378509	.	+	.	ID=gene406;Dbxref=GeneID:4805851;Name=SSA_0384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0384
NC_009009.1	RefSeq	CDS	376380	378509	.	+	0	ID=cds365;Parent=gene406;Dbxref=Genbank:YP_001034386.1,GeneID:4805851;Name=YP_001034386.1;Note=GC: 43.15%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.803. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.997)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034386.1;transl_table=11
NC_009009.1	RefSeq	gene	378616	380340	.	-	.	ID=gene407;Dbxref=GeneID:4807972;Name=opuAb;gbkey=Gene;gene=opuAb;gene_biotype=protein_coding;locus_tag=SSA_0385
NC_009009.1	RefSeq	CDS	378616	380340	.	-	0	ID=cds366;Parent=gene407;Dbxref=Genbank:YP_001034387.1,GeneID:4807972;Name=YP_001034387.1;Note=GC: 49.22%25%3B Transporter classification TC:3.A.1.12.5. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten;gbkey=CDS;gene=opuAb;product=glycine/betaine ABC transporter permease;protein_id=YP_001034387.1;transl_table=11
NC_009009.1	RefSeq	gene	380355	381545	.	-	.	ID=gene408;Dbxref=GeneID:4806036;Name=opuAa;gbkey=Gene;gene=opuAa;gene_biotype=protein_coding;locus_tag=SSA_0386
NC_009009.1	RefSeq	CDS	380355	381545	.	-	0	ID=cds367;Parent=gene408;Dbxref=Genbank:YP_001034388.1,GeneID:4806036;Name=YP_001034388.1;Note=GC: 48.53%25%3B Transporter classification TC:3.A.1.12.5. Codon Adaptation Index (CAI): 0.781. Curator(s): T. Kitten;gbkey=CDS;gene=opuAa;product=glycine-betaine ABC transporter ATPase component;protein_id=YP_001034388.1;transl_table=11
NC_009009.1	RefSeq	gene	381792	382433	.	-	.	ID=gene409;Dbxref=GeneID:4807916;Name=SSA_0387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0387
NC_009009.1	RefSeq	CDS	381792	382433	.	-	0	ID=cds368;Parent=gene409;Dbxref=Genbank:YP_001034389.1,GeneID:4807916;Name=YP_001034389.1;Note=GC: 48.29%25%3B Codon Adaptation Index (CAI): 0.735. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_001034389.1;transl_table=11
NC_009009.1	RefSeq	gene	382614	384308	.	+	.	ID=gene410;Dbxref=GeneID:4806825;Name=SSA_0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0388
NC_009009.1	RefSeq	CDS	382614	384308	.	+	0	ID=cds369;Parent=gene410;Dbxref=Genbank:YP_001034390.1,GeneID:4806825;Name=YP_001034390.1;Note=GC: 45.37%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.746. SignalP prediction: Yes (prob. 0.933)%3B Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=mismatch repair ATPase;protein_id=YP_001034390.1;transl_table=11
NC_009009.1	RefSeq	gene	384312	385142	.	+	.	ID=gene411;Dbxref=GeneID:4806786;Name=SSA_0389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0389
NC_009009.1	RefSeq	CDS	384312	385142	.	+	0	ID=cds370;Parent=gene411;Dbxref=Genbank:YP_001034391.1,GeneID:4806786;Name=YP_001034391.1;Note=GC: 46.69%25%3B Codon Adaptation Index (CAI): 0.747. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034391.1;transl_table=11
NC_009009.1	RefSeq	gene	385142	385774	.	+	.	ID=gene412;Dbxref=GeneID:4806773;Name=SSA_0390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0390
NC_009009.1	RefSeq	CDS	385142	385774	.	+	0	ID=cds371;Parent=gene412;Dbxref=Genbank:YP_001034392.1,GeneID:4806773;Name=YP_001034392.1;Note=GC: 47.71%25%3B Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034392.1;transl_table=11
NC_009009.1	RefSeq	gene	386086	387861	.	+	.	ID=gene413;Dbxref=GeneID:4806355;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=SSA_0391
NC_009009.1	RefSeq	CDS	386086	387861	.	+	0	ID=cds372;Parent=gene413;Dbxref=Genbank:YP_001034393.1,GeneID:4806355;Name=YP_001034393.1;Note=GC: 43.3%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten;gbkey=CDS;gene=spxB;product=pyruvate oxidase;protein_id=YP_001034393.1;transl_table=11
NC_009009.1	RefSeq	gene	388016	388363	.	+	.	ID=gene414;Dbxref=GeneID:4806690;Name=SSA_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0392
NC_009009.1	RefSeq	CDS	388016	388363	.	+	0	ID=cds373;Parent=gene414;Dbxref=Genbank:YP_001034394.1,GeneID:4806690;Name=YP_001034394.1;Note=GC: 39.94%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034394.1;transl_table=11
NC_009009.1	RefSeq	gene	388906	390480	.	+	.	ID=gene415;Dbxref=GeneID:4806626;Name=SSA_0393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0393
NC_009009.1	RefSeq	CDS	388906	390480	.	+	0	ID=cds374;Parent=gene415;Dbxref=Genbank:YP_001034395.1,GeneID:4806626;Name=YP_001034395.1;Note=GC: 36.13%25%3B Transporter classification TC:3.A.1.112.3. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.77. SignalP prediction: Yes (prob. 0.695)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=bacteriocin ABC transporter permease/ATP-binding protein;protein_id=YP_001034395.1;transl_table=11
NC_009009.1	RefSeq	gene	390713	390991	.	+	.	ID=gene416;Dbxref=GeneID:4807590;Name=SSA_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0394
NC_009009.1	RefSeq	CDS	390713	390991	.	+	0	ID=cds375;Parent=gene416;Dbxref=Genbank:YP_001034396.1,GeneID:4807590;Name=YP_001034396.1;Note=GC: 42.29%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.737. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034396.1;transl_table=11
NC_009009.1	RefSeq	gene	391201	392640	.	+	.	ID=gene417;Dbxref=GeneID:4806082;Name=arb;gbkey=Gene;gene=arb;gene_biotype=protein_coding;locus_tag=SSA_0395
NC_009009.1	RefSeq	CDS	391201	392640	.	+	0	ID=cds376;Parent=gene417;Dbxref=Genbank:YP_001034397.1,GeneID:4806082;Name=YP_001034397.1;Note=required for arbutin uptake and metabolism;gbkey=CDS;gene=arb;product=6-phospho-beta-glucosidase;protein_id=YP_001034397.1;transl_table=11
NC_009009.1	RefSeq	gene	392738	393685	.	-	.	ID=gene418;Dbxref=GeneID:4807895;Name=SSA_0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0396
NC_009009.1	RefSeq	CDS	392738	393685	.	-	0	ID=cds377;Parent=gene418;Dbxref=Genbank:YP_001034398.1,GeneID:4807895;Name=YP_001034398.1;Note=GC: 45.15%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.77. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.528)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034398.1;transl_table=11
NC_009009.1	RefSeq	gene	394082	394747	.	-	.	ID=gene419;Dbxref=GeneID:4807213;Name=SSA_0397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0397
NC_009009.1	RefSeq	CDS	394082	394747	.	-	0	ID=cds378;Parent=gene419;Dbxref=Genbank:YP_001034399.1,GeneID:4807213;Name=YP_001034399.1;Note=GC: 38.14%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.758. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034399.1;transl_table=11
NC_009009.1	RefSeq	gene	394764	396542	.	-	.	ID=gene420;Dbxref=GeneID:4808093;Name=SSA_0398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0398
NC_009009.1	RefSeq	CDS	394764	396542	.	-	0	ID=cds379;Parent=gene420;Dbxref=Genbank:YP_001034400.1,GeneID:4808093;Name=YP_001034400.1;Note=GC: 45.31%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.763. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten %2C J. Alves%3B beta-lactamase family;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034400.1;transl_table=11
NC_009009.1	RefSeq	gene	396560	398341	.	-	.	ID=gene421;Dbxref=GeneID:4807639;Name=SSA_0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0400
NC_009009.1	RefSeq	CDS	396560	398341	.	-	0	ID=cds380;Parent=gene421;Dbxref=Genbank:YP_001034401.1,GeneID:4807639;Name=YP_001034401.1;Note=GC: 48.09%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten%3B beta-lactamase family;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034401.1;transl_table=11
NC_009009.1	RefSeq	gene	398602	399282	.	+	.	ID=gene422;Dbxref=GeneID:4808103;Name=SSA_0401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0401
NC_009009.1	RefSeq	CDS	398602	399282	.	+	0	ID=cds381;Parent=gene422;Dbxref=Genbank:YP_001034402.1,GeneID:4808103;Name=YP_001034402.1;Note=GC: 48.75%25%3B Codon Adaptation Index (CAI): 0.789. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001034402.1;transl_table=11
NC_009009.1	RefSeq	gene	399284	400159	.	+	.	ID=gene423;Dbxref=GeneID:4806514;Name=SSA_0402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0402
NC_009009.1	RefSeq	CDS	399284	400159	.	+	0	ID=cds382;Parent=gene423;Dbxref=Genbank:YP_001034403.1,GeneID:4806514;Name=YP_001034403.1;Note=GC: 48.4%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.769. SignalP prediction: Yes (prob. 0.46)%3B Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=histidine kinase;protein_id=YP_001034403.1;transl_table=11
NC_009009.1	RefSeq	gene	400615	401448	.	+	.	ID=gene424;Dbxref=GeneID:4806361;Name=SSA_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0403
NC_009009.1	RefSeq	CDS	400615	401448	.	+	0	ID=cds383;Parent=gene424;Dbxref=Genbank:YP_001034404.1,GeneID:4806361;Name=YP_001034404.1;Note=GC: 43.88%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.754. Curator(s): M. Chaplin;gbkey=CDS;product=CAAX amino protease;protein_id=YP_001034404.1;transl_table=11
NC_009009.1	RefSeq	gene	401558	402175	.	+	.	ID=gene425;Dbxref=GeneID:4806486;Name=SSA_0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0405
NC_009009.1	RefSeq	CDS	401558	402175	.	+	0	ID=cds384;Parent=gene425;Dbxref=Genbank:YP_001034405.1,GeneID:4806486;Name=YP_001034405.1;Note=GC: 47.09%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.725. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034405.1;transl_table=11
NC_009009.1	RefSeq	gene	402286	403008	.	-	.	ID=gene426;Dbxref=GeneID:4807198;Name=SSA_0406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0406
NC_009009.1	RefSeq	CDS	402286	403008	.	-	0	ID=cds385;Parent=gene426;Dbxref=Genbank:YP_001034406.1,GeneID:4807198;Name=YP_001034406.1;Note=GC: 43.98%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.745. Weakly similar ro membrane proteins. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034406.1;transl_table=11
NC_009009.1	RefSeq	gene	403001	403933	.	-	.	ID=gene427;Dbxref=GeneID:4807767;Name=SSA_0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0407
NC_009009.1	RefSeq	CDS	403001	403933	.	-	0	ID=cds386;Parent=gene427;Dbxref=Genbank:YP_001034407.1,GeneID:4807767;Name=YP_001034407.1;Note=GC: 45.44%25%3B Transporter classification TC:3.A.1.124.2. Codon Adaptation Index (CAI): 0.76. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001034407.1;transl_table=11
NC_009009.1	RefSeq	gene	404079	404774	.	-	.	ID=gene428;Dbxref=GeneID:4807202;Name=SSA_0408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0408
NC_009009.1	RefSeq	CDS	404079	404774	.	-	0	ID=cds387;Parent=gene428;Dbxref=Genbank:YP_001034408.1,GeneID:4807202;Name=YP_001034408.1;Note=GC: 41.67%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.737. Weakly similar to membrane proteins and transporters. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034408.1;transl_table=11
NC_009009.1	RefSeq	gene	404787	405695	.	-	.	ID=gene429;Dbxref=GeneID:4806706;Name=SSA_0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0409
NC_009009.1	RefSeq	CDS	404787	405695	.	-	0	ID=cds388;Parent=gene429;Dbxref=Genbank:YP_001034409.1,GeneID:4806706;Name=YP_001034409.1;Note=GC: 45.87%25%3B Transporter classification TC:3.A.1.124.2. Codon Adaptation Index (CAI): 0.739. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001034409.1;transl_table=11
NC_009009.1	RefSeq	gene	405840	406532	.	-	.	ID=gene430;Dbxref=GeneID:4806624;Name=SSA_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0410
NC_009009.1	RefSeq	CDS	405840	406532	.	-	0	ID=cds389;Parent=gene430;Dbxref=Genbank:YP_001034410.1,GeneID:4806624;Name=YP_001034410.1;Note=GC: 42.71%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.712. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034410.1;transl_table=11
NC_009009.1	RefSeq	gene	406570	407328	.	-	.	ID=gene431;Dbxref=GeneID:4806997;Name=SSA_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0411
NC_009009.1	RefSeq	CDS	406570	407328	.	-	0	ID=cds390;Parent=gene431;Dbxref=Genbank:YP_001034411.1,GeneID:4806997;Name=YP_001034411.1;Note=GC: 42.56%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.756. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034411.1;transl_table=11
NC_009009.1	RefSeq	gene	407345	408253	.	-	.	ID=gene432;Dbxref=GeneID:4806821;Name=SSA_0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0412
NC_009009.1	RefSeq	CDS	407345	408253	.	-	0	ID=cds391;Parent=gene432;Dbxref=Genbank:YP_001034412.1,GeneID:4806821;Name=YP_001034412.1;Note=GC: 48.73%25%3B Transporter classification TC:3.A.1.124.2. Codon Adaptation Index (CAI): 0.74. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001034412.1;transl_table=11
NC_009009.1	RefSeq	gene	408405	410126	.	-	.	ID=gene433;Dbxref=GeneID:4807154;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=SSA_0413
NC_009009.1	RefSeq	CDS	408405	410126	.	-	0	ID=cds392;Parent=gene433;Dbxref=Genbank:YP_001034413.1,GeneID:4807154;Name=YP_001034413.1;Note=GC: 49.3%25%3B Codon Adaptation Index (CAI): 0.761. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;gene=pabB;product=anthranilate/para-aminobenzoate synthases component I/ chorismate binding enzyme;protein_id=YP_001034413.1;transl_table=11
NC_009009.1	RefSeq	gene	410258	410629	.	+	.	ID=gene434;Dbxref=GeneID:4806339;Name=SSA_0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0414
NC_009009.1	RefSeq	CDS	410258	410629	.	+	0	ID=cds393;Parent=gene434;Dbxref=Genbank:YP_001034414.1,GeneID:4806339;Name=YP_001034414.1;Note=GC: 41.4%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.723. SignalP prediction: Yes (prob. 0.829)%3B Weakly similar to integral membrane protein. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034414.1;transl_table=11
NC_009009.1	RefSeq	gene	410708	411790	.	+	.	ID=gene435;Dbxref=GeneID:4808106;Name=SSA_0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0415
NC_009009.1	RefSeq	CDS	410708	411790	.	+	0	ID=cds394;Parent=gene435;Dbxref=Genbank:YP_001034415.1,GeneID:4808106;Name=YP_001034415.1;Note=GC: 48.01%25%3B Transporter classification TC:9.B.22.1.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.743. SignalP prediction: Yes (prob. 0.733)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=permease;protein_id=YP_001034415.1;transl_table=11
NC_009009.1	RefSeq	gene	412030	414282	.	+	.	ID=gene436;Dbxref=GeneID:4806257;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=SSA_0416
NC_009009.1	RefSeq	CDS	412030	414282	.	+	0	ID=cds395;Parent=gene436;Dbxref=Genbank:YP_001034416.1,GeneID:4806257;Name=YP_001034416.1;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase;protein_id=YP_001034416.1;transl_table=11
NC_009009.1	RefSeq	gene	414420	415298	.	+	.	ID=gene437;Dbxref=GeneID:4807150;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=SSA_0417
NC_009009.1	RefSeq	CDS	414420	415298	.	+	0	ID=cds396;Parent=gene437;Dbxref=Genbank:YP_001034417.1,GeneID:4807150;Name=YP_001034417.1;Note=GC: 45.39%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): M. Chaplin;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=YP_001034417.1;transl_table=11
NC_009009.1	RefSeq	gene	415396	416244	.	+	.	ID=gene438;Dbxref=GeneID:4806659;Name=SSA_0418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0418
NC_009009.1	RefSeq	CDS	415396	416244	.	+	0	ID=cds397;Parent=gene438;Dbxref=Genbank:YP_001034418.1,GeneID:4806659;Name=YP_001034418.1;Note=GC: 50.41%25%3B Codon Adaptation Index (CAI): 0.775. Helix-turn-helix prediction: AraC. Curator(s): M. Chaplin;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_001034418.1;transl_table=11
NC_009009.1	RefSeq	gene	416353	418590	.	+	.	ID=gene439;Dbxref=GeneID:4805923;Name=SSA_0419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0419
NC_009009.1	RefSeq	CDS	416353	418590	.	+	0	ID=cds398;Parent=gene439;Dbxref=Genbank:YP_001034419.1,GeneID:4805923;Name=YP_001034419.1;Note=GC: 49.46%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): M. Chaplin;gbkey=CDS;product=alpha-galactosidase;protein_id=YP_001034419.1;transl_table=11
NC_009009.1	RefSeq	gene	418760	419692	.	+	.	ID=gene440;Dbxref=GeneID:4807333;Name=SSA_0420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0420
NC_009009.1	RefSeq	CDS	418760	419692	.	+	0	ID=cds399;Parent=gene440;Dbxref=Genbank:YP_001034420.1,GeneID:4807333;Name=YP_001034420.1;Note=GC: 48.98%25%3B Codon Adaptation Index (CAI): 0.766. Curator(s): M. Chaplin;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=YP_001034420.1;transl_table=11
NC_009009.1	RefSeq	gene	419704	420300	.	+	.	ID=gene441;Dbxref=GeneID:4807123;Name=SSA_0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0421
NC_009009.1	RefSeq	CDS	419704	420300	.	+	0	ID=cds400;Parent=gene441;Dbxref=Genbank:YP_001034421.1,GeneID:4807123;Name=YP_001034421.1;Note=GC: 48.07%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=phosphoglycerate mutase family protein;protein_id=YP_001034421.1;transl_table=11
NC_009009.1	RefSeq	gene	420297	420899	.	+	.	ID=gene442;Dbxref=GeneID:4807261;Name=SSA_0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0422
NC_009009.1	RefSeq	CDS	420297	420899	.	+	0	ID=cds401;Parent=gene442;Dbxref=Genbank:YP_001034422.1,GeneID:4807261;Name=YP_001034422.1;Note=GC: 50.75%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=phosphoglycerate mutase family protein;protein_id=YP_001034422.1;transl_table=11
NC_009009.1	RefSeq	gene	420958	421437	.	-	.	ID=gene443;Dbxref=GeneID:4806814;Name=SSA_0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0423
NC_009009.1	RefSeq	CDS	420958	421437	.	-	0	ID=cds402;Parent=gene443;Dbxref=Genbank:YP_001034423.1,GeneID:4806814;Name=YP_001034423.1;Note=GC: 46.88%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.703. SignalP prediction: Yes (prob. 0.945)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034423.1;transl_table=11
NC_009009.1	RefSeq	gene	421412	422323	.	-	.	ID=gene444;Dbxref=GeneID:4807858;Name=SSA_0424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0424
NC_009009.1	RefSeq	CDS	421412	422323	.	-	0	ID=cds403;Parent=gene444;Dbxref=Genbank:YP_001034424.1,GeneID:4807858;Name=YP_001034424.1;Note=GC: 48.79%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.712. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999). Related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. Curator(s): M. Chaplin;gbkey=CDS;product=exopolysaccharide biosynthesis protein;protein_id=YP_001034424.1;transl_table=11
NC_009009.1	RefSeq	gene	422320	423369	.	-	.	ID=gene445;Dbxref=GeneID:4806559;Name=SSA_0425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0425
NC_009009.1	RefSeq	CDS	422320	423369	.	-	0	ID=cds404;Parent=gene445;Dbxref=Genbank:YP_001034425.1,GeneID:4806559;Name=YP_001034425.1;Note=GC: 46.48%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.73. Probably involved in cell-wall biogenesis. Curator(s): M. Chaplin;gbkey=CDS;product=glycosyltransferase;protein_id=YP_001034425.1;transl_table=11
NC_009009.1	RefSeq	gene	423655	424476	.	-	.	ID=gene446;Dbxref=GeneID:4808107;Name=SSA_0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0426
NC_009009.1	RefSeq	CDS	423655	424476	.	-	0	ID=cds405;Parent=gene446;Dbxref=Genbank:YP_001034426.1,GeneID:4808107;Name=YP_001034426.1;Note=GC: 48.91%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.737. SignalP prediction: Yes (prob. 0.968)%3B Curator(s): M. Chaplin;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034426.1;transl_table=11
NC_009009.1	RefSeq	gene	424637	427675	.	+	.	ID=gene447;Dbxref=GeneID:4807217;Name=SSA_0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0427
NC_009009.1	RefSeq	CDS	424637	427675	.	+	0	ID=cds406;Parent=gene447;Dbxref=Genbank:YP_001034427.1,GeneID:4807217;Name=YP_001034427.1;Note=GC: 47.84%25%3B Codon Adaptation Index (CAI): 0.766. Helix-turn-helix prediction: AraC. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=SARP family transcriptional regulator;protein_id=YP_001034427.1;transl_table=11
NC_009009.1	RefSeq	gene	427755	428894	.	-	.	ID=gene448;Dbxref=GeneID:4807642;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=SSA_0428
NC_009009.1	RefSeq	CDS	427755	428894	.	-	0	ID=cds407;Parent=gene448;Dbxref=Genbank:YP_001034428.1,GeneID:4807642;Name=YP_001034428.1;Note=catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate;gbkey=CDS;gene=hutG;product=formimidoylglutamase;protein_id=YP_001034428.1;transl_table=11
NC_009009.1	RefSeq	gene	429791	431341	.	-	.	ID=gene449;Dbxref=GeneID:4805807;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=SSA_0429
NC_009009.1	RefSeq	CDS	429791	431341	.	-	0	ID=cds408;Parent=gene449;Dbxref=Genbank:YP_001034429.1,GeneID:4805807;Name=YP_001034429.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;gene=hutH;product=histidine ammonia-lyase;protein_id=YP_001034429.1;transl_table=11
NC_009009.1	RefSeq	gene	431338	432690	.	-	.	ID=gene450;Dbxref=GeneID:4807244;Name=SSA_0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0430
NC_009009.1	RefSeq	CDS	431338	432690	.	-	0	ID=cds409;Parent=gene450;Dbxref=Genbank:YP_001034430.1,GeneID:4807244;Name=YP_001034430.1;Note=GC: 42.72%25%3B Transporter classification TC:2.A.3.6.1. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.757. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=cationic amino acid transporter;protein_id=YP_001034430.1;transl_table=11
NC_009009.1	RefSeq	gene	432766	433365	.	-	.	ID=gene451;Dbxref=GeneID:4807471;Name=SSA_0431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0431
NC_009009.1	RefSeq	CDS	432766	433365	.	-	0	ID=cds410;Parent=gene451;Dbxref=Genbank:YP_001034431.1,GeneID:4807471;Name=YP_001034431.1;Note=GC: 47%25%3B Codon Adaptation Index (CAI): 0.712. Curator(s): M. Chaplin;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034431.1;transl_table=11
NC_009009.1	RefSeq	gene	433378	435051	.	-	.	ID=gene452;Dbxref=GeneID:4808102;Name=SSA_0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0432
NC_009009.1	RefSeq	CDS	433378	435051	.	-	0	ID=cds411;Parent=gene452;Dbxref=Genbank:YP_001034432.2,GeneID:4808102;Name=YP_001034432.2;Note=catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate;gbkey=CDS;product=formate--tetrahydrofolate ligase;protein_id=YP_001034432.2;transl_table=11
NC_009009.1	RefSeq	gene	435118	435744	.	-	.	ID=gene453;Dbxref=GeneID:4806435;Name=SSA_0433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0433
NC_009009.1	RefSeq	CDS	435118	435744	.	-	0	ID=cds412;Parent=gene453;Dbxref=Genbank:YP_001034433.1,GeneID:4806435;Name=YP_001034433.1;Note=GC: 49.12%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): M. Chaplin;gbkey=CDS;product=methenyltetrahydrofolate cyclohydrolase;protein_id=YP_001034433.1;transl_table=11
NC_009009.1	RefSeq	gene	435759	436658	.	-	.	ID=gene454;Dbxref=GeneID:4806053;Name=SSA_0434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0434
NC_009009.1	RefSeq	CDS	435759	436658	.	-	0	ID=cds413;Parent=gene454;Dbxref=Genbank:YP_001034434.1,GeneID:4806053;Name=YP_001034434.1;Note=GC: 47.11%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): M. Chaplin;gbkey=CDS;product=glutamate formiminotransferase;protein_id=YP_001034434.1;transl_table=11
NC_009009.1	RefSeq	gene	436779	438809	.	-	.	ID=gene455;Dbxref=GeneID:4808078;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=SSA_0435
NC_009009.1	RefSeq	CDS	436779	438809	.	-	0	ID=cds414;Parent=gene455;Dbxref=Genbank:YP_001034435.1,GeneID:4808078;Name=YP_001034435.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;gene=hutU;product=urocanate hydratase;protein_id=YP_001034435.1;transl_table=11
NC_009009.1	RefSeq	gene	439009	440274	.	+	.	ID=gene456;Dbxref=GeneID:4805791;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=SSA_0436
NC_009009.1	RefSeq	CDS	439009	440274	.	+	0	ID=cds415;Parent=gene456;Dbxref=Genbank:YP_001034436.1,GeneID:4805791;Name=YP_001034436.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;gene=hutI;product=imidazolonepropionase;protein_id=YP_001034436.1;transl_table=11
NC_009009.1	RefSeq	gene	440453	440743	.	+	.	ID=gene457;Dbxref=GeneID:4807370;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SSA_0437
NC_009009.1	RefSeq	CDS	440453	440743	.	+	0	ID=cds416;Parent=gene457;Dbxref=Genbank:YP_001034437.1,GeneID:4807370;Name=YP_001034437.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=YP_001034437.1;transl_table=11
NC_009009.1	RefSeq	gene	440755	441249	.	+	.	ID=gene458;Dbxref=GeneID:4805799;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=SSA_0438
NC_009009.1	RefSeq	CDS	440755	441249	.	+	0	ID=cds417;Parent=gene458;Dbxref=Genbank:YP_001034438.1,GeneID:4805799;Name=YP_001034438.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;gene=ssb;product=single-stranded DNA-binding protein;protein_id=YP_001034438.1;transl_table=11
NC_009009.1	RefSeq	gene	441286	441525	.	+	.	ID=gene459;Dbxref=GeneID:4806047;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SSA_0440
NC_009009.1	RefSeq	CDS	441286	441525	.	+	0	ID=cds418;Parent=gene459;Dbxref=Genbank:YP_001034439.1,GeneID:4806047;Name=YP_001034439.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=YP_001034439.1;transl_table=11
NC_009009.1	RefSeq	gene	441621	442235	.	+	.	ID=gene460;Dbxref=GeneID:4806133;Name=SSA_0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0441
NC_009009.1	RefSeq	CDS	441621	442235	.	+	0	ID=cds419;Parent=gene460;Dbxref=Genbank:YP_001034440.1,GeneID:4806133;Name=YP_001034440.1;Note=GC: 40.16%25%3B Codon Adaptation Index (CAI): 0.793. Helix-turn-helix prediction: AraC. Curator(s): M. Chaplin;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034440.1;transl_table=11
NC_009009.1	RefSeq	gene	442377	443090	.	+	.	ID=gene461;Dbxref=GeneID:4806566;Name=SSA_0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0442
NC_009009.1	RefSeq	CDS	442377	443090	.	+	0	ID=cds420;Parent=gene461;Dbxref=Genbank:YP_001034441.1,GeneID:4806566;Name=YP_001034441.1;Note=GC: 40.62%25%3B Transporter classification TC:3.A.1.211.3. Codon Adaptation Index (CAI): 0.727. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001034441.1;transl_table=11
NC_009009.1	RefSeq	gene	443017	444627	.	+	.	ID=gene462;Dbxref=GeneID:4808108;Name=SSA_0443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0443
NC_009009.1	RefSeq	CDS	443017	444627	.	+	0	ID=cds421;Parent=gene462;Dbxref=Genbank:YP_001034442.1,GeneID:4808108;Name=YP_001034442.1;Note=GC: 41.28%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.726. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001034442.1;transl_table=11
NC_009009.1	RefSeq	gene	444627	444836	.	+	.	ID=gene463;Dbxref=GeneID:4807494;Name=SSA_0445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0445
NC_009009.1	RefSeq	CDS	444627	444836	.	+	0	ID=cds422;Parent=gene463;Dbxref=Genbank:YP_001034443.1,GeneID:4807494;Name=YP_001034443.1;Note=GC: 37.14%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.721. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): M. Chaplin;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034443.1;transl_table=11
NC_009009.1	RefSeq	gene	444854	445528	.	-	.	ID=gene464;Dbxref=GeneID:4807290;Name=SSA_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0446
NC_009009.1	RefSeq	CDS	444854	445528	.	-	0	ID=cds423;Parent=gene464;Dbxref=Genbank:YP_001034444.1,GeneID:4807290;Name=YP_001034444.1;Note=GC: 48.15%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.761. Helix-turn-helix prediction: AraC. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034444.1;transl_table=11
NC_009009.1	RefSeq	gene	445547	446491	.	-	.	ID=gene465;Dbxref=GeneID:4807610;Name=SSA_0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0447
NC_009009.1	RefSeq	CDS	445547	446491	.	-	0	ID=cds424;Parent=gene465;Dbxref=Genbank:YP_001034445.1,GeneID:4807610;Name=YP_001034445.1;Note=GC: 45.5%25%3B Transporter classification TC:1.A.35.3.1. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.744. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=magnesium/cobalt transporter CorA;protein_id=YP_001034445.1;transl_table=11
NC_009009.1	RefSeq	gene	446620	449451	.	+	.	ID=gene466;Dbxref=GeneID:4806010;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=SSA_0448
NC_009009.1	RefSeq	CDS	446620	449451	.	+	0	ID=cds425;Parent=gene466;Dbxref=Genbank:YP_001034446.1,GeneID:4806010;Name=YP_001034446.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate;gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=YP_001034446.1;transl_table=11
NC_009009.1	RefSeq	gene	449604	450665	.	+	.	ID=gene467;Dbxref=GeneID:4807423;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=SSA_0449
NC_009009.1	RefSeq	CDS	449604	450665	.	+	0	ID=cds426;Parent=gene467;Dbxref=Genbank:YP_001034447.1,GeneID:4807423;Name=YP_001034447.1;Note=GC: 46.8%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): M. Chaplin;gbkey=CDS;gene=pepP;product=aminopeptidase;protein_id=YP_001034447.1;transl_table=11
NC_009009.1	RefSeq	gene	450727	451287	.	+	.	ID=gene468;Dbxref=GeneID:4807787;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=SSA_0450
NC_009009.1	RefSeq	CDS	450727	451287	.	+	0	ID=cds427;Parent=gene468;Dbxref=Genbank:YP_001034448.1,GeneID:4807787;Name=YP_001034448.1;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;gbkey=CDS;gene=efp;product=elongation factor P;protein_id=YP_001034448.1;transl_table=11
NC_009009.1	RefSeq	gene	451307	451696	.	+	.	ID=gene469;Dbxref=GeneID:4807074;Name=SSA_0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0451
NC_009009.1	RefSeq	CDS	451307	451696	.	+	0	ID=cds428;Parent=gene469;Dbxref=Genbank:YP_001034449.1,GeneID:4807074;Name=YP_001034449.1;Note=GC: 44.87%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): M. Chaplin;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034449.1;transl_table=11
NC_009009.1	RefSeq	gene	451674	452120	.	+	.	ID=gene470;Dbxref=GeneID:4807021;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SSA_0452
NC_009009.1	RefSeq	CDS	451674	452120	.	+	0	ID=cds429;Parent=gene470;Dbxref=Genbank:YP_001034450.1,GeneID:4807021;Name=YP_001034450.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antitermination protein NusB;protein_id=YP_001034450.1;transl_table=11
NC_009009.1	RefSeq	gene	452352	456053	.	+	.	ID=gene471;Dbxref=GeneID:4807461;Name=SSA_0453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0453
NC_009009.1	RefSeq	CDS	452352	456053	.	+	0	ID=cds430;Parent=gene471;Dbxref=Genbank:YP_001034451.1,GeneID:4807461;Name=YP_001034451.1;Note=GC: 45.19%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): M. Chaplin;gbkey=CDS;product=Type II secretory pathway%2C pullulanase PulA glycosidase;protein_id=YP_001034451.1;transl_table=11
NC_009009.1	RefSeq	gene	456140	457105	.	-	.	ID=gene472;Dbxref=GeneID:4808087;Name=scrR;gbkey=Gene;gene=scrR;gene_biotype=protein_coding;locus_tag=SSA_0454
NC_009009.1	RefSeq	CDS	456140	457105	.	-	0	ID=cds431;Parent=gene472;Dbxref=Genbank:YP_001034452.1,GeneID:4808087;Name=YP_001034452.1;Note=GC: 46.79%25%3B Codon Adaptation Index (CAI): 0.744. Helix-turn-helix prediction: LysR\AraC. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;gene=scrR;product=lactose operon transcriptional repressor%2C LacI family;protein_id=YP_001034452.1;transl_table=11
NC_009009.1	RefSeq	gene	457086	458540	.	-	.	ID=gene473;Dbxref=GeneID:4808104;Name=scrB;gbkey=Gene;gene=scrB;gene_biotype=protein_coding;locus_tag=SSA_0455
NC_009009.1	RefSeq	CDS	457086	458540	.	-	0	ID=cds432;Parent=gene473;Dbxref=Genbank:YP_001034453.1,GeneID:4808104;Name=YP_001034453.1;Note=GC: 46.19%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): M. Chaplin %2C T. Kitten;gbkey=CDS;gene=scrB;product=sucrose-6-phosphate hydrolase;protein_id=YP_001034453.1;transl_table=11
NC_009009.1	RefSeq	gene	458735	460645	.	+	.	ID=gene474;Dbxref=GeneID:4806388;Name=scrA;gbkey=Gene;gene=scrA;gene_biotype=protein_coding;locus_tag=SSA_0456
NC_009009.1	RefSeq	CDS	458735	460645	.	+	0	ID=cds433;Parent=gene474;Dbxref=Genbank:YP_001034454.1,GeneID:4806388;Name=YP_001034454.1;Note=GC: 42.12%25%3B Transporter classification TC:4.A.1.2.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.809. Curator(s): M. Chaplin;gbkey=CDS;gene=scrA;product=phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific;protein_id=YP_001034454.1;transl_table=11
NC_009009.1	RefSeq	gene	460803	461702	.	+	.	ID=gene475;Dbxref=GeneID:4806510;Name=scrK;gbkey=Gene;gene=scrK;gene_biotype=protein_coding;locus_tag=SSA_0457
NC_009009.1	RefSeq	CDS	460803	461702	.	+	0	ID=cds434;Parent=gene475;Dbxref=Genbank:YP_001034455.1,GeneID:4806510;Name=YP_001034455.1;Note=GC: 47.78%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): M. Chaplin;gbkey=CDS;gene=scrK;product=fructokinase;protein_id=YP_001034455.1;transl_table=11
NC_009009.1	RefSeq	gene	461749	462159	.	+	.	ID=gene476;Dbxref=GeneID:4807156;Name=SSA_0458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0458
NC_009009.1	RefSeq	CDS	461749	462159	.	+	0	ID=cds435;Parent=gene476;Dbxref=Genbank:YP_001034456.1,GeneID:4807156;Name=YP_001034456.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;product=peptide deformylase;protein_id=YP_001034456.1;transl_table=11
NC_009009.1	RefSeq	gene	462238	462573	.	+	.	ID=gene477;Dbxref=GeneID:4806498;Name=SSA_0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0459
NC_009009.1	RefSeq	CDS	462238	462573	.	+	0	ID=cds436;Parent=gene477;Dbxref=Genbank:YP_001034457.1,GeneID:4806498;Name=YP_001034457.1;Note=GC: 44.64%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.734. SignalP prediction: Yes (prob. 0.983)%3B Curator(s): M. Chaplin;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034457.1;transl_table=11
NC_009009.1	RefSeq	gene	462748	463206	.	+	.	ID=gene478;Dbxref=GeneID:4807273;Name=SSA_0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0460
NC_009009.1	RefSeq	CDS	462748	463206	.	+	0	ID=cds437;Parent=gene478;Dbxref=Genbank:YP_001034458.1,GeneID:4807273;Name=YP_001034458.1;Note=GC: 42.48%25%3B Codon Adaptation Index (CAI): 0.791. Helix-turn-helix prediction: AraC. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multiple antibiotic resistance operon transcription repressor MarR;protein_id=YP_001034458.1;transl_table=11
NC_009009.1	RefSeq	gene	463199	464965	.	+	.	ID=gene479;Dbxref=GeneID:4808109;Name=SSA_0461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0461
NC_009009.1	RefSeq	CDS	463199	464965	.	+	0	ID=cds438;Parent=gene479;Dbxref=Genbank:YP_001034459.1,GeneID:4808109;Name=YP_001034459.1;Note=GC: 47.43%25%3B Transporter classification TC:3.A.1.117.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.771. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001034459.1;transl_table=11
NC_009009.1	RefSeq	gene	464955	466712	.	+	.	ID=gene480;Dbxref=GeneID:4807589;Name=SSA_0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0462
NC_009009.1	RefSeq	CDS	464955	466712	.	+	0	ID=cds439;Parent=gene480;Dbxref=Genbank:YP_001034460.1,GeneID:4807589;Name=YP_001034460.1;Note=GC: 47.33%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.48)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001034460.1;transl_table=11
NC_009009.1	RefSeq	gene	467005	468363	.	+	.	ID=gene481;Dbxref=GeneID:4806655;Name=SSA_0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0463
NC_009009.1	RefSeq	CDS	467005	468363	.	+	0	ID=cds440;Parent=gene481;Dbxref=Genbank:YP_001034461.1,GeneID:4806655;Name=YP_001034461.1;Note=responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid;gbkey=CDS;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=YP_001034461.1;transl_table=11
NC_009009.1	RefSeq	gene	468365	469315	.	+	.	ID=gene482;Dbxref=GeneID:4807268;Name=SSA_0464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0464
NC_009009.1	RefSeq	CDS	468365	469315	.	+	0	ID=cds441;Parent=gene482;Dbxref=Genbank:YP_001034462.1,GeneID:4807268;Name=YP_001034462.1;Note=GC: 49.42%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Curator(s): M. Chaplin;gbkey=CDS;product=cobalamin biosynthesis protein cobD;protein_id=YP_001034462.1;transl_table=11
NC_009009.1	RefSeq	gene	469325	470023	.	+	.	ID=gene483;Dbxref=GeneID:4807117;Name=cbiC;gbkey=Gene;gene=cbiC;gene_biotype=protein_coding;locus_tag=SSA_0465
NC_009009.1	RefSeq	CDS	469325	470023	.	+	0	ID=cds442;Parent=gene483;Dbxref=Genbank:YP_001034463.1,GeneID:4807117;Name=YP_001034463.1;Note=catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin;gbkey=CDS;gene=cbiC;product=cobalt-precorrin-8X methylmutase;protein_id=YP_001034463.1;transl_table=11
NC_009009.1	RefSeq	gene	470024	470728	.	+	.	ID=gene484;Dbxref=GeneID:4806239;Name=cbiC;gbkey=Gene;gene=cbiC;gene_biotype=protein_coding;locus_tag=SSA_0466
NC_009009.1	RefSeq	CDS	470024	470728	.	+	0	ID=cds443;Parent=gene484;Dbxref=Genbank:YP_001034464.1,GeneID:4806239;Name=YP_001034464.1;Note=catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin;gbkey=CDS;gene=cbiC;product=cobalt-precorrin-8X methylmutase;protein_id=YP_001034464.1;transl_table=11
NC_009009.1	RefSeq	gene	470728	471855	.	+	.	ID=gene485;Dbxref=GeneID:4807259;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=SSA_0467
NC_009009.1	RefSeq	CDS	470728	471855	.	+	0	ID=cds444;Parent=gene485;Dbxref=Genbank:YP_001034465.1,GeneID:4807259;Name=YP_001034465.1;Note=Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A;gbkey=CDS;gene=cbiD;product=cobalt-precorrin-6A synthase;protein_id=YP_001034465.1;transl_table=11
NC_009009.1	RefSeq	gene	471846	472478	.	+	.	ID=gene486;Dbxref=GeneID:4808077;Name=SSA_0468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0468
NC_009009.1	RefSeq	CDS	471846	472478	.	+	0	ID=cds445;Parent=gene486;Dbxref=Genbank:YP_001034466.1,GeneID:4808077;Name=YP_001034466.1;Note=catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a;gbkey=CDS;product=cobalt-precorrin-6Y C(5)-methyltransferase;protein_id=YP_001034466.1;transl_table=11
NC_009009.1	RefSeq	gene	472450	473019	.	+	.	ID=gene487;Dbxref=GeneID:4806225;Name=cobL;gbkey=Gene;gene=cobL;gene_biotype=protein_coding;locus_tag=SSA_0469
NC_009009.1	RefSeq	CDS	472450	473019	.	+	0	ID=cds446;Parent=gene487;Dbxref=Genbank:YP_001034467.1,GeneID:4806225;Name=YP_001034467.1;Note=catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W%3B decarboxylating;gbkey=CDS;gene=cobL;product=cobalt-precorrin-6Y C(15)-methyltransferase;protein_id=YP_001034467.1;transl_table=11
NC_009009.1	RefSeq	gene	473019	473792	.	+	.	ID=gene488;Dbxref=GeneID:4807194;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=SSA_0470
NC_009009.1	RefSeq	CDS	473019	473792	.	+	0	ID=cds447;Parent=gene488;Dbxref=Genbank:YP_001034468.1,GeneID:4807194;Name=YP_001034468.1;Note=GC: 49.61%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;gene=cobM;product=precorrin-4 methylase;protein_id=YP_001034468.1;transl_table=11
NC_009009.1	RefSeq	gene	473740	474843	.	+	.	ID=gene489;Dbxref=GeneID:4807885;Name=SSA_0471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0471
NC_009009.1	RefSeq	CDS	473740	474843	.	+	0	ID=cds448;Parent=gene489;Dbxref=Genbank:YP_001034469.1,GeneID:4807885;Name=YP_001034469.1;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3;gbkey=CDS;product=cobalamin biosynthesis protein CbiG;protein_id=YP_001034469.1;transl_table=11
NC_009009.1	RefSeq	gene	474920	475645	.	+	.	ID=gene490;Dbxref=GeneID:4806552;Name=SSA_0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0472
NC_009009.1	RefSeq	CDS	474920	475645	.	+	0	ID=cds449;Parent=gene490;Dbxref=Genbank:YP_001034470.1,GeneID:4806552;Name=YP_001034470.1;Note=GC: 44.9%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): M. Chaplin;gbkey=CDS;product=precorrin-3B C(17)-methyltransferase;protein_id=YP_001034470.1;transl_table=11
NC_009009.1	RefSeq	gene	475642	476391	.	+	.	ID=gene491;Dbxref=GeneID:4806177;Name=SSA_0473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0473
NC_009009.1	RefSeq	CDS	475642	476391	.	+	0	ID=cds450;Parent=gene491;Dbxref=Genbank:YP_001034471.1,GeneID:4806177;Name=YP_001034471.1;Note=GC: 51.6%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): M. Chaplin;gbkey=CDS;product=precorrin-6x reductase;protein_id=YP_001034471.1;transl_table=11
NC_009009.1	RefSeq	gene	476410	477849	.	+	.	ID=gene492;Dbxref=GeneID:4808023;Name=SSA_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0474
NC_009009.1	RefSeq	CDS	476410	477849	.	+	0	ID=cds451;Parent=gene492;Dbxref=Genbank:YP_001034472.1,GeneID:4808023;Name=YP_001034472.1;Note=GC: 50.07%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): M. Chaplin;gbkey=CDS;product=uroporphyrin-III C-methyltransferase;protein_id=YP_001034472.1;transl_table=11
NC_009009.1	RefSeq	gene	477863	478630	.	+	.	ID=gene493;Dbxref=GeneID:4807865;Name=SSA_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0475
NC_009009.1	RefSeq	CDS	477863	478630	.	+	0	ID=cds452;Parent=gene493;Dbxref=Genbank:YP_001034473.1,GeneID:4807865;Name=YP_001034473.1;Note=GC: 48.44%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): M. Chaplin;gbkey=CDS;product=CbiK protein;protein_id=YP_001034473.1;transl_table=11
NC_009009.1	RefSeq	gene	478640	479341	.	+	.	ID=gene494;Dbxref=GeneID:4806254;Name=SSA_0476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0476
NC_009009.1	RefSeq	CDS	478640	479341	.	+	0	ID=cds453;Parent=gene494;Dbxref=Genbank:YP_001034474.1,GeneID:4806254;Name=YP_001034474.1;Note=catalyzes the formation of precorrin-3A from precorrin-2;gbkey=CDS;product=cobalt-precorrin-2 C(20)-methyltransferase;protein_id=YP_001034474.1;transl_table=11
NC_009009.1	RefSeq	gene	479363	480145	.	+	.	ID=gene495;Dbxref=GeneID:4805979;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=SSA_0477
NC_009009.1	RefSeq	CDS	479363	480145	.	+	0	ID=cds454;Parent=gene495;Dbxref=Genbank:YP_001034475.1,GeneID:4805979;Name=YP_001034475.1;Note=GC: 43.81%25%3B Transporter classification TC:3.A.1.23.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.768. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.995)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;gene=cbiM;product=cobalt ABC transporter ATP-binding protein;protein_id=YP_001034475.1;transl_table=11
NC_009009.1	RefSeq	gene	480142	480447	.	+	.	ID=gene496;Dbxref=GeneID:4806090;Name=cbiN;gbkey=Gene;gene=cbiN;gene_biotype=protein_coding;locus_tag=SSA_0478
NC_009009.1	RefSeq	CDS	480142	480447	.	+	0	ID=cds455;Parent=gene496;Dbxref=Genbank:YP_001034476.1,GeneID:4806090;Name=YP_001034476.1;Note=GC: 42.48%25%3B Transporter classification TC:3.A.1.18.1. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.778. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;gene=cbiN;product=cobalt transport protein cbiN;protein_id=YP_001034476.1;transl_table=11
NC_009009.1	RefSeq	gene	480565	481239	.	+	.	ID=gene497;Dbxref=GeneID:4806325;Name=SSA_0479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0479
NC_009009.1	RefSeq	CDS	480565	481239	.	+	0	ID=cds456;Parent=gene497;Dbxref=Genbank:YP_001034477.1,GeneID:4806325;Name=YP_001034477.1;Note=GC: 43.41%25%3B Transporter classification TC:3.A.1.18.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.791. Curator(s): M. Chaplin %2C T. Kitten;gbkey=CDS;product=CbiQ protein;protein_id=YP_001034477.1;transl_table=11
NC_009009.1	RefSeq	gene	481302	482117	.	+	.	ID=gene498;Dbxref=GeneID:4806061;Name=SSA_0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0480
NC_009009.1	RefSeq	CDS	481302	482117	.	+	0	ID=cds457;Parent=gene498;Dbxref=Genbank:YP_001034478.1,GeneID:4806061;Name=YP_001034478.1;Note=GC: 48.16%25%3B Transporter classification TC:3.A.1.18.1. Codon Adaptation Index (CAI): 0.78. Curator(s): M. Chaplin;gbkey=CDS;product=cobalt ABC transporter ATP-binding protein;protein_id=YP_001034478.1;transl_table=11
NC_009009.1	RefSeq	gene	482102	483601	.	+	.	ID=gene499;Dbxref=GeneID:4807837;Name=SSA_0481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0481
NC_009009.1	RefSeq	CDS	482102	483601	.	+	0	ID=cds458;Parent=gene499;Dbxref=Genbank:YP_001034479.1,GeneID:4807837;Name=YP_001034479.1;Note=catalyzes amidations at positions B%2C D%2C E%2C and G on adenosylcobyrinic A%2CC-diamide. NH(2) groups are provided by glutamine%2C and one molecule of ATP is hydrogenolyzed for each amidation;gbkey=CDS;product=cobyric acid synthase;protein_id=YP_001034479.1;transl_table=11
NC_009009.1	RefSeq	gene	483598	484173	.	+	.	ID=gene500;Dbxref=GeneID:4806155;Name=SSA_0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0482
NC_009009.1	RefSeq	CDS	483598	484173	.	+	0	ID=cds459;Parent=gene500;Dbxref=Genbank:YP_001034480.1,GeneID:4806155;Name=YP_001034480.1;Note=GC: 50.87%25%3B Codon Adaptation Index (CAI): 0.746. Curator(s): M. Chaplin;gbkey=CDS;product=ATP:cobalamin adenosyl transferase;protein_id=YP_001034480.1;transl_table=11
NC_009009.1	RefSeq	gene	484185	484616	.	+	.	ID=gene501;Dbxref=GeneID:4805893;Name=SSA_0483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0483
NC_009009.1	RefSeq	CDS	484185	484616	.	+	0	ID=cds460;Parent=gene501;Dbxref=Genbank:YP_001034481.1,GeneID:4805893;Name=YP_001034481.1;Note=GC: 50.46%25%3B Codon Adaptation Index (CAI): 0.724. Curator(s): M. Chaplin;gbkey=CDS;product=siroheme synthase;protein_id=YP_001034481.1;transl_table=11
NC_009009.1	RefSeq	gene	484632	485885	.	+	.	ID=gene502;Dbxref=GeneID:4806219;Name=SSA_0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0484
NC_009009.1	RefSeq	CDS	484632	485885	.	+	0	ID=cds461;Parent=gene502;Dbxref=Genbank:YP_001034482.1,GeneID:4806219;Name=YP_001034482.1;Note=GC: 48.09%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): M. Chaplin;gbkey=CDS;product=glutamyl-tRNA reductase;protein_id=YP_001034482.1;transl_table=11
NC_009009.1	RefSeq	gene	485872	486792	.	+	.	ID=gene503;Dbxref=GeneID:4806458;Name=SSA_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0485
NC_009009.1	RefSeq	CDS	485872	486792	.	+	0	ID=cds462;Parent=gene503;Dbxref=Genbank:YP_001034483.1,GeneID:4806458;Name=YP_001034483.1;Note=GC: 53.53%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): M. Chaplin;gbkey=CDS;product=porphobilinogen deaminase;protein_id=YP_001034483.1;transl_table=11
NC_009009.1	RefSeq	gene	486777	487502	.	+	.	ID=gene504;Dbxref=GeneID:4806025;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=SSA_0486
NC_009009.1	RefSeq	CDS	486777	487502	.	+	0	ID=cds463;Parent=gene504;Dbxref=Genbank:YP_001034484.1,GeneID:4806025;Name=YP_001034484.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen-III synthase;protein_id=YP_001034484.1;transl_table=11
NC_009009.1	RefSeq	gene	487489	488460	.	+	.	ID=gene505;Dbxref=GeneID:4806319;Name=SSA_0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0487
NC_009009.1	RefSeq	CDS	487489	488460	.	+	0	ID=cds464;Parent=gene505;Dbxref=Genbank:YP_001034485.1,GeneID:4806319;Name=YP_001034485.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=YP_001034485.1;transl_table=11
NC_009009.1	RefSeq	gene	488504	489802	.	+	.	ID=gene506;Dbxref=GeneID:4807429;Name=SSA_0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0488
NC_009009.1	RefSeq	CDS	488504	489802	.	+	0	ID=cds465;Parent=gene506;Dbxref=Genbank:YP_001034486.1,GeneID:4807429;Name=YP_001034486.1;Note=GC: 51.27%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): M. Chaplin %2C T. Kitten;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=YP_001034486.1;transl_table=11
NC_009009.1	RefSeq	gene	489795	490379	.	+	.	ID=gene507;Dbxref=GeneID:4807877;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=SSA_0489
NC_009009.1	RefSeq	CDS	489795	490379	.	+	0	ID=cds466;Parent=gene507;Dbxref=Genbank:YP_001034487.1,GeneID:4807877;Name=YP_001034487.1;Note=GC: 53.5%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;gene=cobU;product=adenosylcobinamide kinase;protein_id=YP_001034487.1;transl_table=11
NC_009009.1	RefSeq	gene	490376	491104	.	+	.	ID=gene508;Dbxref=GeneID:4806720;Name=SSA_0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0490
NC_009009.1	RefSeq	CDS	490376	491104	.	+	0	ID=cds467;Parent=gene508;Dbxref=Genbank:YP_001034488.1,GeneID:4806720;Name=YP_001034488.1;Note=GC: 49.79%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.736. Curator(s): M. Chaplin;gbkey=CDS;product=cobalamin 5'-phosphate synthase;protein_id=YP_001034488.1;transl_table=11
NC_009009.1	RefSeq	gene	491101	491673	.	+	.	ID=gene509;Dbxref=GeneID:4807757;Name=SSA_0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0491
NC_009009.1	RefSeq	CDS	491101	491673	.	+	0	ID=cds468;Parent=gene509;Dbxref=Genbank:YP_001034489.1,GeneID:4807757;Name=YP_001034489.1;Note=GC: 51.31%25%3B Codon Adaptation Index (CAI): 0.754. Curator(s): M. Chaplin;gbkey=CDS;product=alpha-ribazole-5'-phosphate phosphatase;protein_id=YP_001034489.1;transl_table=11
NC_009009.1	RefSeq	gene	491728	492831	.	+	.	ID=gene510;Dbxref=GeneID:4807663;Name=SSA_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0492
NC_009009.1	RefSeq	CDS	491728	492831	.	+	0	ID=cds469;Parent=gene510;Dbxref=Genbank:YP_001034490.1,GeneID:4807663;Name=YP_001034490.1;Note=GC: 51.63%25%3B Codon Adaptation Index (CAI): 0.778. Curator(s): M. Chaplin;gbkey=CDS;product=NADH-dependent flavin oxidoreductase;protein_id=YP_001034490.1;transl_table=11
NC_009009.1	RefSeq	gene	493008	494543	.	+	.	ID=gene511;Dbxref=GeneID:4805886;Name=SSA_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0493
NC_009009.1	RefSeq	CDS	493008	494543	.	+	0	ID=cds470;Parent=gene511;Dbxref=Genbank:YP_001034491.1,GeneID:4805886;Name=YP_001034491.1;Note=GC: 46.81%25%3B Transporter classification TC:3.A.1.5.3. Codon Adaptation Index (CAI): 0.779. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=peptide ABC transporter periplasmic protein;protein_id=YP_001034491.1;transl_table=11
NC_009009.1	RefSeq	gene	494547	495329	.	+	.	ID=gene512;Dbxref=GeneID:4807172;Name=SSA_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0494
NC_009009.1	RefSeq	CDS	494547	495329	.	+	0	ID=cds471;Parent=gene512;Dbxref=Genbank:YP_001034492.1,GeneID:4807172;Name=YP_001034492.1;Note=GC: 50.83%25%3B Transporter classification TC:3.A.1.5.9. Codon Adaptation Index (CAI): 0.752. Helix-turn-helix prediction: AraC. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001034492.1;transl_table=11
NC_009009.1	RefSeq	gene	495326	496096	.	+	.	ID=gene513;Dbxref=GeneID:4806502;Name=SSA_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0495
NC_009009.1	RefSeq	CDS	495326	496096	.	+	0	ID=cds472;Parent=gene513;Dbxref=Genbank:YP_001034493.1,GeneID:4806502;Name=YP_001034493.1;Note=GC: 52.01%25%3B Transporter classification TC:3.A.1.5.6. Codon Adaptation Index (CAI): 0.774. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001034493.1;transl_table=11
NC_009009.1	RefSeq	gene	496086	497069	.	+	.	ID=gene514;Dbxref=GeneID:4806594;Name=SSA_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0496
NC_009009.1	RefSeq	CDS	496086	497069	.	+	0	ID=cds473;Parent=gene514;Dbxref=Genbank:YP_001034494.1,GeneID:4806594;Name=YP_001034494.1;Note=GC: 51.42%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=YP_001034494.1;transl_table=11
NC_009009.1	RefSeq	gene	497062	498057	.	+	.	ID=gene515;Dbxref=GeneID:4808069;Name=SSA_0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0497
NC_009009.1	RefSeq	CDS	497062	498057	.	+	0	ID=cds474;Parent=gene515;Dbxref=Genbank:YP_001034495.1,GeneID:4808069;Name=YP_001034495.1;Note=GC: 49.4%25%3B Transporter classification TC:3.A.1.5.3. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.764. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): M. Chaplin;gbkey=CDS;product=nickel ABC transporter;protein_id=YP_001034495.1;transl_table=11
NC_009009.1	RefSeq	gene	498050	498859	.	+	.	ID=gene516;Dbxref=GeneID:4807738;Name=SSA_0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0498
NC_009009.1	RefSeq	CDS	498050	498859	.	+	0	ID=cds475;Parent=gene516;Dbxref=Genbank:YP_001034496.1,GeneID:4807738;Name=YP_001034496.1;Note=GC: 50%25%3B Transporter classification TC:3.A.1.5.3. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.755. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_001034496.1;transl_table=11
NC_009009.1	RefSeq	gene	499055	500551	.	+	.	ID=gene517;Dbxref=GeneID:4806459;Name=SSA_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0499
NC_009009.1	RefSeq	CDS	499055	500551	.	+	0	ID=cds476;Parent=gene517;Dbxref=Genbank:YP_001034497.1,GeneID:4806459;Name=YP_001034497.1;Note=GC: 45.02%25%3B Transporter classification TC:3.A.1.5.3. Codon Adaptation Index (CAI): 0.803. Curator(s): M. Chaplin %2C J. Alves;gbkey=CDS;product=peptide ABC transporter periplasmic protein;protein_id=YP_001034497.1;transl_table=11
NC_009009.1	RefSeq	gene	500643	501584	.	+	.	ID=gene518;Dbxref=GeneID:4807445;Name=SSA_0500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0500
NC_009009.1	RefSeq	CDS	500643	501584	.	+	0	ID=cds477;Parent=gene518;Dbxref=Genbank:YP_001034498.1,GeneID:4807445;Name=YP_001034498.1;Note=GC: 45.75%25%3B Transporter classification TC:3.A.1.5.3. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.747. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): D. Akan.;gbkey=CDS;product=peptide ABC transporter%2C permease protein;protein_id=YP_001034498.1;transl_table=11
NC_009009.1	RefSeq	gene	501694	502383	.	+	.	ID=gene519;Dbxref=GeneID:4807446;Name=SSA_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0502
NC_009009.1	RefSeq	CDS	501694	502383	.	+	0	ID=cds478;Parent=gene519;Dbxref=Genbank:YP_001034499.1,GeneID:4807446;Name=YP_001034499.1;Note=GC: 45.94%25%3B Transporter classification TC:3.A.1.5.3. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.782. Curator(s): D. Akan.;gbkey=CDS;product=peptide ABC transporter%2C permease protein;protein_id=YP_001034499.1;transl_table=11
NC_009009.1	RefSeq	gene	502371	503162	.	+	.	ID=gene520;Dbxref=GeneID:4807324;Name=SSA_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0503
NC_009009.1	RefSeq	CDS	502371	503162	.	+	0	ID=cds479;Parent=gene520;Dbxref=Genbank:YP_001034500.1,GeneID:4807324;Name=YP_001034500.1;Note=GC: 49.37%25%3B Transporter classification TC:3.A.1.5.9. Codon Adaptation Index (CAI): 0.763. Curator(s): D. Akan.;gbkey=CDS;product=peptide ABC transporter%2C ATP-binding protein;protein_id=YP_001034500.1;transl_table=11
NC_009009.1	RefSeq	gene	503149	503859	.	+	.	ID=gene521;Dbxref=GeneID:4806105;Name=amiF;gbkey=Gene;gene=amiF;gene_biotype=protein_coding;locus_tag=SSA_0504
NC_009009.1	RefSeq	CDS	503149	503859	.	+	0	ID=cds480;Parent=gene521;Dbxref=Genbank:YP_001034501.1,GeneID:4806105;Name=YP_001034501.1;Note=GC: 47.96%25%3B Transporter classification TC:3.A.1.5.3. Codon Adaptation Index (CAI): 0.747. Curator(s): D. Akan.;gbkey=CDS;gene=amiF;product=peptide ABC transporter%2C ATP-binding protein;protein_id=YP_001034501.1;transl_table=11
NC_009009.1	RefSeq	gene	503912	504487	.	+	.	ID=gene522;Dbxref=GeneID:4807747;Name=SSA_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0505
NC_009009.1	RefSeq	CDS	503912	504487	.	+	0	ID=cds481;Parent=gene522;Dbxref=Genbank:YP_001034502.1,GeneID:4807747;Name=YP_001034502.1;Note=GC: 47.22%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034502.1;transl_table=11
NC_009009.1	RefSeq	gene	504520	505719	.	-	.	ID=gene523;Dbxref=GeneID:4806627;Name=SSA_0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0506
NC_009009.1	RefSeq	CDS	504520	505719	.	-	0	ID=cds482;Parent=gene523;Dbxref=Genbank:YP_001034503.1,GeneID:4806627;Name=YP_001034503.1;Note=GC: 48.25%25%3B Codon Adaptation Index (CAI): 0.753. Curator(s): D. Akan.;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_001034503.1;transl_table=11
NC_009009.1	RefSeq	gene	505861	506502	.	+	.	ID=gene524;Dbxref=GeneID:4807233;Name=SSA_0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0507
NC_009009.1	RefSeq	CDS	505861	506502	.	+	0	ID=cds483;Parent=gene524;Dbxref=Genbank:YP_001034504.1,GeneID:4807233;Name=YP_001034504.1;Note=GC: 36.29%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.779. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034504.1;transl_table=11
NC_009009.1	RefSeq	gene	506808	508124	.	+	.	ID=gene525;Dbxref=GeneID:4806316;Name=SSA_0508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0508
NC_009009.1	RefSeq	CDS	506808	508124	.	+	0	ID=cds484;Parent=gene525;Dbxref=Genbank:YP_001034505.1,GeneID:4806316;Name=YP_001034505.1;Note=GC: 43.89%25%3B Codon Adaptation Index (CAI): 0.799. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034505.1;transl_table=11
NC_009009.1	RefSeq	gene	508164	508598	.	+	.	ID=gene526;Dbxref=GeneID:4808100;Name=SSA_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0509
NC_009009.1	RefSeq	CDS	508164	508598	.	+	0	ID=cds485;Parent=gene526;Dbxref=Genbank:YP_001034506.1,GeneID:4808100;Name=YP_001034506.1;Note=GC: 45.29%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): D. Akan.;gbkey=CDS;product=propanediol utilization protein;protein_id=YP_001034506.1;transl_table=11
NC_009009.1	RefSeq	gene	508663	509757	.	+	.	ID=gene527;Dbxref=GeneID:4806629;Name=SSA_0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0510
NC_009009.1	RefSeq	CDS	508663	509757	.	+	0	ID=cds486;Parent=gene527;Dbxref=Genbank:YP_001034507.1,GeneID:4806629;Name=YP_001034507.1;Note=GC: 48.58%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan.;gbkey=CDS;product=L-threonine-O-3-phosphate decarboxylase;protein_id=YP_001034507.1;transl_table=11
NC_009009.1	RefSeq	gene	509750	510616	.	+	.	ID=gene528;Dbxref=GeneID:4807986;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=SSA_0511
NC_009009.1	RefSeq	CDS	509750	510616	.	+	0	ID=cds487;Parent=gene528;Dbxref=Genbank:YP_001034508.1,GeneID:4807986;Name=YP_001034508.1;Note=GC: 50.17%25%3B Codon Adaptation Index (CAI): 0.745. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=pduX;product=propanediol utilization kinase;protein_id=YP_001034508.1;transl_table=11
NC_009009.1	RefSeq	gene	510579	511685	.	+	.	ID=gene529;Dbxref=GeneID:4807652;Name=SSA_0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0512
NC_009009.1	RefSeq	CDS	510579	511685	.	+	0	ID=cds488;Parent=gene529;Dbxref=Genbank:YP_001034509.1,GeneID:4807652;Name=YP_001034509.1;Note=GC: 49.14%25%3B Codon Adaptation Index (CAI): 0.779. Curator(s): D. Akan.;gbkey=CDS;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=YP_001034509.1;transl_table=11
NC_009009.1	RefSeq	gene	511698	512297	.	+	.	ID=gene530;Dbxref=GeneID:4808015;Name=SSA_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0513
NC_009009.1	RefSeq	CDS	511698	512297	.	+	0	ID=cds489;Parent=gene530;Dbxref=Genbank:YP_001034510.1,GeneID:4808015;Name=YP_001034510.1;Note=GC: 45.17%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): D. Akan.;gbkey=CDS;product=ATP:cob(I)alamin adenosyltransferase;protein_id=YP_001034510.1;transl_table=11
NC_009009.1	RefSeq	gene	513017	514159	.	+	.	ID=gene531;Dbxref=GeneID:4807816;Name=SSA_0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0514
NC_009009.1	RefSeq	CDS	513017	514159	.	+	0	ID=cds490;Parent=gene531;Dbxref=Genbank:YP_001034511.1,GeneID:4807816;Name=YP_001034511.1;Note=GC: 45.23%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): D. Akan.;gbkey=CDS;product=PduQ protein;protein_id=YP_001034511.1;transl_table=11
NC_009009.1	RefSeq	gene	514274	514600	.	+	.	ID=gene532;Dbxref=GeneID:4807569;Name=SSA_0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0515
NC_009009.1	RefSeq	CDS	514274	514600	.	+	0	ID=cds491;Parent=gene532;Dbxref=Genbank:YP_001034512.1,GeneID:4807569;Name=YP_001034512.1;Note=GC: 46.48%25%3B Codon Adaptation Index (CAI): 0.757. Curator(s): D. Akan.;gbkey=CDS;product=propanediol utilization protein PduU;protein_id=YP_001034512.1;transl_table=11
NC_009009.1	RefSeq	gene	514625	515200	.	+	.	ID=gene533;Dbxref=GeneID:4807692;Name=SSA_0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0516
NC_009009.1	RefSeq	CDS	514625	515200	.	+	0	ID=cds492;Parent=gene533;Dbxref=Genbank:YP_001034513.1,GeneID:4807692;Name=YP_001034513.1;Note=GC: 42.71%25%3B Codon Adaptation Index (CAI): 0.761. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=two-component response regulator;protein_id=YP_001034513.1;transl_table=11
NC_009009.1	RefSeq	gene	515200	516636	.	+	.	ID=gene534;Dbxref=GeneID:4807124;Name=SSA_0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0517
NC_009009.1	RefSeq	CDS	515200	516636	.	+	0	ID=cds493;Parent=gene534;Dbxref=Genbank:YP_001034514.1,GeneID:4807124;Name=YP_001034514.1;Note=GC: 44.05%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): D. Akan.;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_001034514.1;transl_table=11
NC_009009.1	RefSeq	gene	516750	518183	.	+	.	ID=gene535;Dbxref=GeneID:4807524;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=SSA_0518
NC_009009.1	RefSeq	CDS	516750	518183	.	+	0	ID=cds494;Parent=gene535;Dbxref=Genbank:YP_001034515.1,GeneID:4807524;Name=YP_001034515.1;Note=ethanolamine utilization protein EutA;gbkey=CDS;gene=eutA;product=reactivating factor for ethanolamine ammonia lyase;protein_id=YP_001034515.1;transl_table=11
NC_009009.1	RefSeq	gene	518215	519585	.	+	.	ID=gene536;Dbxref=GeneID:4807779;Name=SSA_0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0519
NC_009009.1	RefSeq	CDS	518215	519585	.	+	0	ID=cds495;Parent=gene536;Dbxref=Genbank:YP_001034516.1,GeneID:4807779;Name=YP_001034516.1;Note=GC: 43.76%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): D. Akan.;gbkey=CDS;product=ethanolamine ammonia-lyase large subunit;protein_id=YP_001034516.1;transl_table=11
NC_009009.1	RefSeq	gene	519602	520522	.	+	.	ID=gene537;Dbxref=GeneID:4807426;Name=SSA_0520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0520
NC_009009.1	RefSeq	CDS	519602	520522	.	+	0	ID=cds496;Parent=gene537;Dbxref=Genbank:YP_001034517.1,GeneID:4807426;Name=YP_001034517.1;Note=catalyzes the formation of acetaldehyde from ethanolamine;gbkey=CDS;product=ethanolamine ammonia-lyase small subunit;protein_id=YP_001034517.1;transl_table=11
NC_009009.1	RefSeq	gene	520532	521191	.	+	.	ID=gene538;Dbxref=GeneID:4807133;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=SSA_0521
NC_009009.1	RefSeq	CDS	520532	521191	.	+	0	ID=cds497;Parent=gene538;Dbxref=Genbank:YP_001034518.1,GeneID:4807133;Name=YP_001034518.1;Note=GC: 47.88%25%3B Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.931)%3B Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=eutL;product=ethanolamine utilization protein EutL;protein_id=YP_001034518.1;transl_table=11
NC_009009.1	RefSeq	gene	521207	521770	.	+	.	ID=gene539;Dbxref=GeneID:4807883;Name=SSA_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0522
NC_009009.1	RefSeq	CDS	521207	521770	.	+	0	ID=cds498;Parent=gene539;Dbxref=Genbank:YP_001034519.1,GeneID:4807883;Name=YP_001034519.1;Note=GC: 42.38%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): D. Akan.;gbkey=CDS;product=ethanolamine utilization protein;protein_id=YP_001034519.1;transl_table=11
NC_009009.1	RefSeq	gene	521777	523255	.	+	.	ID=gene540;Dbxref=GeneID:4807576;Name=SSA_0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0523
NC_009009.1	RefSeq	CDS	521777	523255	.	+	0	ID=cds499;Parent=gene540;Dbxref=Genbank:YP_001034520.1,GeneID:4807576;Name=YP_001034520.1;Note=GC: 44.9%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): D. Akan.;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_001034520.1;transl_table=11
NC_009009.1	RefSeq	gene	523290	523571	.	+	.	ID=gene541;Dbxref=GeneID:4807015;Name=SSA_0524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0524
NC_009009.1	RefSeq	CDS	523290	523571	.	+	0	ID=cds500;Parent=gene541;Dbxref=Genbank:YP_001034521.1,GeneID:4807015;Name=YP_001034521.1;Note=GC: 45.39%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): D. Akan.;gbkey=CDS;product=microcompartment protein;protein_id=YP_001034521.1;transl_table=11
NC_009009.1	RefSeq	gene	523627	523902	.	+	.	ID=gene542;Dbxref=GeneID:4806954;Name=SSA_0525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0525
NC_009009.1	RefSeq	CDS	523627	523902	.	+	0	ID=cds501;Parent=gene542;Dbxref=Genbank:YP_001034522.1,GeneID:4806954;Name=YP_001034522.1;Note=GC: 45.65%25%3B Codon Adaptation Index (CAI): 0.79. Curator(s): D. Akan.;gbkey=CDS;product=microcompartment protein;protein_id=YP_001034522.1;transl_table=11
NC_009009.1	RefSeq	gene	524100	524741	.	+	.	ID=gene543;Dbxref=GeneID:4807468;Name=SSA_0526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0526
NC_009009.1	RefSeq	CDS	524100	524741	.	+	0	ID=cds502;Parent=gene543;Dbxref=Genbank:YP_001034523.1,GeneID:4807468;Name=YP_001034523.1;Note=GC: 41.43%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034523.1;transl_table=11
NC_009009.1	RefSeq	gene	524765	525391	.	+	.	ID=gene544;Dbxref=GeneID:4807008;Name=pduL;gbkey=Gene;gene=pduL;gene_biotype=protein_coding;locus_tag=SSA_0527
NC_009009.1	RefSeq	CDS	524765	525391	.	+	0	ID=cds503;Parent=gene544;Dbxref=Genbank:YP_001034524.1,GeneID:4807008;Name=YP_001034524.1;Note=GC: 43.7%25%3B Codon Adaptation Index (CAI): 0.818. Helix-turn-helix prediction: AraC. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=pduL;product=propanediol utilization protein PduL;protein_id=YP_001034524.1;transl_table=11
NC_009009.1	RefSeq	gene	525423	526070	.	+	.	ID=gene545;Dbxref=GeneID:4806872;Name=SSA_0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0528
NC_009009.1	RefSeq	CDS	525423	526070	.	+	0	ID=cds504;Parent=gene545;Dbxref=Genbank:YP_001034525.1,GeneID:4806872;Name=YP_001034525.1;Note=GC: 42.28%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034525.1;transl_table=11
NC_009009.1	RefSeq	gene	526085	526366	.	+	.	ID=gene546;Dbxref=GeneID:4807809;Name=SSA_0529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0529
NC_009009.1	RefSeq	CDS	526085	526366	.	+	0	ID=cds505;Parent=gene546;Dbxref=Genbank:YP_001034526.1,GeneID:4807809;Name=YP_001034526.1;Note=GC: 42.55%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): D. Akan.;gbkey=CDS;product=ethanolamine utilization protein;protein_id=YP_001034526.1;transl_table=11
NC_009009.1	RefSeq	gene	526383	527477	.	+	.	ID=gene547;Dbxref=GeneID:4807797;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=SSA_0530
NC_009009.1	RefSeq	CDS	526383	527477	.	+	0	ID=cds506;Parent=gene547;Dbxref=Genbank:YP_001034527.1,GeneID:4807797;Name=YP_001034527.1;Note=GC: 45.57%25%3B Transporter classification TC:9.A.28.1.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.787. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=eutH;product=ethanolamine transporter;protein_id=YP_001034527.1;transl_table=11
NC_009009.1	RefSeq	gene	527495	527944	.	+	.	ID=gene548;Dbxref=GeneID:4807892;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=SSA_0531
NC_009009.1	RefSeq	CDS	527495	527944	.	+	0	ID=cds507;Parent=gene548;Dbxref=Genbank:YP_001034528.1,GeneID:4807892;Name=YP_001034528.1;Note=GC: 46.22%25%3B Codon Adaptation Index (CAI): 0.83. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=eutQ;product=ethanolamine utilization protein EutQ;protein_id=YP_001034528.1;transl_table=11
NC_009009.1	RefSeq	gene	528384	529088	.	+	.	ID=gene549;Dbxref=GeneID:4806852;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=SSA_0532
NC_009009.1	RefSeq	CDS	528384	529088	.	+	0	ID=cds508;Parent=gene549;Dbxref=Genbank:YP_001034529.1,GeneID:4806852;Name=YP_001034529.1;Note=GC: 46.67%25%3B Codon Adaptation Index (CAI): 0.806. Helix-turn-helix prediction: AraC. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=pduB;product=propanediol utilization protein PduB;protein_id=YP_001034529.1;transl_table=11
NC_009009.1	RefSeq	gene	529110	530771	.	+	.	ID=gene550;Dbxref=GeneID:4807875;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=SSA_0533
NC_009009.1	RefSeq	CDS	529110	530771	.	+	0	ID=cds509;Parent=gene550;Dbxref=Genbank:YP_001034530.1,GeneID:4807875;Name=YP_001034530.1;Note=GC: 47.41%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): D. Akan.;gbkey=CDS;gene=pduC;product=glycerol dehydratase large subunit pduC;protein_id=YP_001034530.1;transl_table=11
NC_009009.1	RefSeq	gene	530783	531451	.	+	.	ID=gene551;Dbxref=GeneID:4807826;Name=SSA_0535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0535
NC_009009.1	RefSeq	CDS	530783	531451	.	+	0	ID=cds510;Parent=gene551;Dbxref=Genbank:YP_001034531.1,GeneID:4807826;Name=YP_001034531.1;Note=GC: 45.74%25%3B Codon Adaptation Index (CAI): 0.816. Curator(s): D. Akan.;gbkey=CDS;product=propanediol utilization: dehydratase%2C medium subunit;protein_id=YP_001034531.1;transl_table=11
NC_009009.1	RefSeq	gene	531482	531997	.	+	.	ID=gene552;Dbxref=GeneID:4807712;Name=SSA_0536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0536
NC_009009.1	RefSeq	CDS	531482	531997	.	+	0	ID=cds511;Parent=gene552;Dbxref=Genbank:YP_001034532.1,GeneID:4807712;Name=YP_001034532.1;Note=GC: 44.19%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): D. Akan.;gbkey=CDS;product=B12-dependent diol dehydratase small subunit;protein_id=YP_001034532.1;transl_table=11
NC_009009.1	RefSeq	gene	532097	533953	.	+	.	ID=gene553;Dbxref=GeneID:4807378;Name=SSA_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0537
NC_009009.1	RefSeq	CDS	532097	533953	.	+	0	ID=cds512;Parent=gene553;Dbxref=Genbank:YP_001034533.1,GeneID:4807378;Name=YP_001034533.1;Note=GC: 47.82%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan.;gbkey=CDS;product=propanediol utilization:dioldehydratase reactivation;protein_id=YP_001034533.1;transl_table=11
NC_009009.1	RefSeq	gene	533934	534314	.	+	.	ID=gene554;Dbxref=GeneID:4807573;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=SSA_0538
NC_009009.1	RefSeq	CDS	533934	534314	.	+	0	ID=cds513;Parent=gene554;Dbxref=Genbank:YP_001034534.1,GeneID:4807573;Name=YP_001034534.1;Note=GC: 47.24%25%3B Codon Adaptation Index (CAI): 0.72. Curator(s): D. Akan.;gbkey=CDS;gene=pduH;product=PduH protein;protein_id=YP_001034534.1;transl_table=11
NC_009009.1	RefSeq	gene	534373	534927	.	+	.	ID=gene555;Dbxref=GeneID:4806747;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=SSA_0539
NC_009009.1	RefSeq	CDS	534373	534927	.	+	0	ID=cds514;Parent=gene555;Dbxref=Genbank:YP_001034535.1,GeneID:4806747;Name=YP_001034535.1;Note=GC: 46.67%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): D. Akan.;gbkey=CDS;gene=pduO;product=PduO protein;protein_id=YP_001034535.1;transl_table=11
NC_009009.1	RefSeq	gene	535095	535808	.	+	.	ID=gene556;Dbxref=GeneID:4806497;Name=SSA_0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0540
NC_009009.1	RefSeq	CDS	535095	535808	.	+	0	ID=cds515;Parent=gene556;Dbxref=Genbank:YP_001034536.1,GeneID:4806497;Name=YP_001034536.1;Note=GC: 48.88%25%3B Transporter classification TC:1.A.8.2.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.745. Curator(s): D. Akan.;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=YP_001034536.1;transl_table=11
NC_009009.1	RefSeq	gene	535943	537142	.	+	.	ID=gene557;Dbxref=GeneID:4807056;Name=SSA_0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0541
NC_009009.1	RefSeq	CDS	535943	537142	.	+	0	ID=cds516;Parent=gene557;Dbxref=Genbank:YP_001034537.1,GeneID:4807056;Name=YP_001034537.1;Note=GC: 43.92%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): D. Akan.;gbkey=CDS;product=acetate kinase;protein_id=YP_001034537.1;transl_table=11
NC_009009.1	RefSeq	gene	537419	539938	.	+	.	ID=gene558;Dbxref=GeneID:4806418;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SSA_0543
NC_009009.1	RefSeq	CDS	537419	539938	.	+	0	ID=cds517;Parent=gene558;Dbxref=Genbank:YP_001034538.1,GeneID:4806418;Name=YP_001034538.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=preprotein translocase subunit SecA;protein_id=YP_001034538.1;transl_table=11
NC_009009.1	RefSeq	gene	539959	540990	.	+	.	ID=gene559;Dbxref=GeneID:4806952;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=SSA_0544
NC_009009.1	RefSeq	CDS	539959	540990	.	+	0	ID=cds518;Parent=gene559;Dbxref=Genbank:YP_001034539.1,GeneID:4806952;Name=YP_001034539.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;gene=aroG;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_001034539.1;transl_table=11
NC_009009.1	RefSeq	gene	540992	542023	.	+	.	ID=gene560;Dbxref=GeneID:4807707;Name=aro;gbkey=Gene;gene=aro;gene_biotype=protein_coding;locus_tag=SSA_0546
NC_009009.1	RefSeq	CDS	540992	542023	.	+	0	ID=cds519;Parent=gene560;Dbxref=Genbank:YP_001034540.1,GeneID:4807707;Name=YP_001034540.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;gene=aro;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_001034540.1;transl_table=11
NC_009009.1	RefSeq	gene	542131	542493	.	+	.	ID=gene561;Dbxref=GeneID:4807997;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SSA_0547
NC_009009.1	RefSeq	CDS	542131	542493	.	+	0	ID=cds520;Parent=gene561;Dbxref=Genbank:YP_001034541.1,GeneID:4807997;Name=YP_001034541.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=4'-phosphopantetheinyl transferase;protein_id=YP_001034541.1;transl_table=11
NC_009009.1	RefSeq	gene	542480	543589	.	+	.	ID=gene562;Dbxref=GeneID:4805980;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=SSA_0548
NC_009009.1	RefSeq	CDS	542480	543589	.	+	0	ID=cds521;Parent=gene562;Dbxref=Genbank:YP_001034542.1,GeneID:4805980;Name=YP_001034542.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=YP_001034542.1;transl_table=11
NC_009009.1	RefSeq	gene	543696	545711	.	+	.	ID=gene563;Dbxref=GeneID:4806950;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=SSA_0549
NC_009009.1	RefSeq	CDS	543696	545711	.	+	0	ID=cds522;Parent=gene563;Dbxref=Genbank:YP_001034543.1,GeneID:4806950;Name=YP_001034543.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase RecG;protein_id=YP_001034543.1;transl_table=11
NC_009009.1	RefSeq	gene	546421	547383	.	-	.	ID=gene564;Dbxref=GeneID:4807452;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=SSA_0551
NC_009009.1	RefSeq	CDS	546421	547383	.	-	0	ID=cds523;Parent=gene564;Dbxref=Genbank:YP_001034544.1,GeneID:4807452;Name=YP_001034544.1;Note=GC: 49.53%25%3B Codon Adaptation Index (CAI): 0.753. Curator(s): D. Akan.;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=YP_001034544.1;transl_table=11
NC_009009.1	RefSeq	gene	547564	548961	.	+	.	ID=gene565;Dbxref=GeneID:4806663;Name=SSA_0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0552
NC_009009.1	RefSeq	CDS	547564	548961	.	+	0	ID=cds524;Parent=gene565;Dbxref=Genbank:YP_001034545.1,GeneID:4806663;Name=YP_001034545.1;Note=GC: 46.49%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): D. Akan.;gbkey=CDS;product=Cof family protein;protein_id=YP_001034545.1;transl_table=11
NC_009009.1	RefSeq	gene	549051	549401	.	+	.	ID=gene566;Dbxref=GeneID:4807547;Name=SSA_0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0553
NC_009009.1	RefSeq	CDS	549051	549401	.	+	0	ID=cds525;Parent=gene566;Dbxref=Genbank:YP_001034546.1,GeneID:4807547;Name=YP_001034546.1;Note=GC: 42.17%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034546.1;transl_table=11
NC_009009.1	RefSeq	gene	549405	549752	.	+	.	ID=gene567;Dbxref=GeneID:4806551;Name=SSA_0554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0554
NC_009009.1	RefSeq	CDS	549405	549752	.	+	0	ID=cds526;Parent=gene567;Dbxref=Genbank:YP_001034547.1,GeneID:4806551;Name=YP_001034547.1;Note=GC: 41.09%25%3B Codon Adaptation Index (CAI): 0.761. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034547.1;transl_table=11
NC_009009.1	RefSeq	gene	549755	551506	.	+	.	ID=gene568;Dbxref=GeneID:4807831;Name=SSA_0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0555
NC_009009.1	RefSeq	CDS	549755	551506	.	+	0	ID=cds527;Parent=gene568;Dbxref=Genbank:YP_001034548.1,GeneID:4807831;Name=YP_001034548.1;Note=GC: 40.41%25%3B Codon Adaptation Index (CAI): 0.753. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034548.1;transl_table=11
NC_009009.1	RefSeq	gene	551605	551982	.	+	.	ID=gene569;Dbxref=GeneID:4807108;Name=SSA_0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0556
NC_009009.1	RefSeq	CDS	551605	551982	.	+	0	ID=cds528;Parent=gene569;Dbxref=Genbank:YP_001034549.1,GeneID:4807108;Name=YP_001034549.1;Note=GC: 31.48%25%3B Codon Adaptation Index (CAI): 0.782. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034549.1;transl_table=11
NC_009009.1	RefSeq	gene	552040	552453	.	+	.	ID=gene570;Dbxref=GeneID:4808022;Name=SSA_0557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0557
NC_009009.1	RefSeq	CDS	552040	552453	.	+	0	ID=cds529;Parent=gene570;Dbxref=Genbank:YP_001034550.1,GeneID:4808022;Name=YP_001034550.1;Note=GC: 38.89%25%3B Codon Adaptation Index (CAI): 0.738. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034550.1;transl_table=11
NC_009009.1	RefSeq	gene	552475	552789	.	+	.	ID=gene571;Dbxref=GeneID:4806913;Name=SSA_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0558
NC_009009.1	RefSeq	CDS	552475	552789	.	+	0	ID=cds530;Parent=gene571;Dbxref=Genbank:YP_001034551.1,GeneID:4806913;Name=YP_001034551.1;Note=GC: 38.73%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034551.1;transl_table=11
NC_009009.1	RefSeq	gene	552802	553179	.	+	.	ID=gene572;Dbxref=GeneID:4807572;Name=SSA_0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0559
NC_009009.1	RefSeq	CDS	552802	553179	.	+	0	ID=cds531;Parent=gene572;Dbxref=Genbank:YP_001034552.1,GeneID:4807572;Name=YP_001034552.1;Note=GC: 31.48%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034552.1;transl_table=11
NC_009009.1	RefSeq	gene	553406	553777	.	+	.	ID=gene573;Dbxref=GeneID:4807549;Name=SSA_0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0560
NC_009009.1	RefSeq	CDS	553406	553777	.	+	0	ID=cds532;Parent=gene573;Dbxref=Genbank:YP_001034553.1,GeneID:4807549;Name=YP_001034553.1;Note=GC: 30.38%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034553.1;transl_table=11
NC_009009.1	RefSeq	gene	553770	554315	.	+	.	ID=gene574;Dbxref=GeneID:4806228;Name=SSA_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0561
NC_009009.1	RefSeq	CDS	553770	554315	.	+	0	ID=cds533;Parent=gene574;Dbxref=Genbank:YP_001034554.1,GeneID:4806228;Name=YP_001034554.1;Note=GC: 31.32%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=RNA:NAD 2'-phosphotransferase;protein_id=YP_001034554.1;transl_table=11
NC_009009.1	RefSeq	gene	554608	554919	.	+	.	ID=gene575;Dbxref=GeneID:4806708;Name=SSA_0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0562
NC_009009.1	RefSeq	CDS	554608	554919	.	+	0	ID=cds534;Parent=gene575;Dbxref=Genbank:YP_001034555.1,GeneID:4806708;Name=YP_001034555.1;Note=GC: 32.37%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034555.1;transl_table=11
NC_009009.1	RefSeq	gene	555037	555489	.	-	.	ID=gene576;Dbxref=GeneID:4807673;Name=SSA_0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0563
NC_009009.1	RefSeq	CDS	555037	555489	.	-	0	ID=cds535;Parent=gene576;Dbxref=Genbank:YP_001034556.1,GeneID:4807673;Name=YP_001034556.1;Note=GC: 45.7%25%3B Codon Adaptation Index (CAI): 0.795. Curator(s): D. Akan.;gbkey=CDS;product=universal stress protein;protein_id=YP_001034556.1;transl_table=11
NC_009009.1	RefSeq	gene	555834	557048	.	+	.	ID=gene577;Dbxref=GeneID:4807960;Name=SSA_0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0564
NC_009009.1	RefSeq	CDS	555834	557048	.	+	0	ID=cds536;Parent=gene577;Dbxref=Genbank:YP_001034557.1,GeneID:4807960;Name=YP_001034557.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=YP_001034557.1;transl_table=11
NC_009009.1	RefSeq	gene	557370	559955	.	+	.	ID=gene578;Dbxref=GeneID:4807919;Name=SSA_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0565
NC_009009.1	RefSeq	CDS	557370	559955	.	+	0	ID=cds537;Parent=gene578;Dbxref=Genbank:YP_001034558.1,GeneID:4807919;Name=YP_001034558.1;Note=GC: 45.36%25%3B Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Weakly similar to surface exclusion protein prgA. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034558.1;transl_table=11
NC_009009.1	RefSeq	gene	560157	560945	.	+	.	ID=gene579;Dbxref=GeneID:4807910;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=SSA_0566
NC_009009.1	RefSeq	CDS	560157	560945	.	+	0	ID=cds538;Parent=gene579;Dbxref=Genbank:YP_001034559.1,GeneID:4807910;Name=YP_001034559.1;Note=CodY%3B DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor;gbkey=CDS;gene=codY;product=CodY family transcriptional regulator;protein_id=YP_001034559.1;transl_table=11
NC_009009.1	RefSeq	gene	560945	561502	.	+	.	ID=gene580;Dbxref=GeneID:4808067;Name=SSA_0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0567
NC_009009.1	RefSeq	CDS	560945	561502	.	+	0	ID=cds539;Parent=gene580;Dbxref=Genbank:YP_001034560.1,GeneID:4808067;Name=YP_001034560.1;Note=GC: 42.29%25%3B Codon Adaptation Index (CAI): 0.802. Curator(s): D. Akan.;gbkey=CDS;product=isochorismitase family protein;protein_id=YP_001034560.1;transl_table=11
NC_009009.1	RefSeq	gene	561814	563550	.	+	.	ID=gene581;Dbxref=GeneID:4807668;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=SSA_0568
NC_009009.1	RefSeq	CDS	561814	563550	.	+	0	ID=cds540;Parent=gene581;Dbxref=Genbank:YP_001034561.1,GeneID:4807668;Name=YP_001034561.1;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=YP_001034561.1;transl_table=11
NC_009009.1	RefSeq	gene	563753	564055	.	+	.	ID=gene582;Dbxref=GeneID:4807451;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=SSA_0569
NC_009009.1	RefSeq	CDS	563753	564055	.	+	0	ID=cds541;Parent=gene582;Dbxref=Genbank:YP_001034562.1,GeneID:4807451;Name=YP_001034562.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA%3B some Mycoplasma proteins contain an N-terminal fusion to an unknown domain;gbkey=CDS;gene=gatC;product=aspartyl/glutamyl-tRNA amidotransferase subunit C;protein_id=YP_001034562.1;transl_table=11
NC_009009.1	RefSeq	gene	564055	565521	.	+	.	ID=gene583;Dbxref=GeneID:4807934;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=SSA_0570
NC_009009.1	RefSeq	CDS	564055	565521	.	+	0	ID=cds542;Parent=gene583;Dbxref=Genbank:YP_001034563.1,GeneID:4807934;Name=YP_001034563.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatA;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=YP_001034563.1;transl_table=11
NC_009009.1	RefSeq	gene	565521	566954	.	+	.	ID=gene584;Dbxref=GeneID:4806912;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=SSA_0571
NC_009009.1	RefSeq	CDS	565521	566954	.	+	0	ID=cds543;Parent=gene584;Dbxref=Genbank:YP_001034564.1,GeneID:4806912;Name=YP_001034564.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=YP_001034564.1;transl_table=11
NC_009009.1	RefSeq	gene	567566	568612	.	+	.	ID=gene585;Dbxref=GeneID:4807432;Name=SSA_0572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0572
NC_009009.1	RefSeq	CDS	567566	568612	.	+	0	ID=cds544;Parent=gene585;Dbxref=Genbank:YP_001034565.1,GeneID:4807432;Name=YP_001034565.1;Note=GC: 47.76%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): D. Akan.;gbkey=CDS;product=dehydrogenase;protein_id=YP_001034565.1;transl_table=11
NC_009009.1	RefSeq	gene	568706	568822	.	-	.	ID=gene586;Dbxref=GeneID:4806910;Name=SSA_0573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0573
NC_009009.1	RefSeq	CDS	568706	568822	.	-	0	ID=cds545;Parent=gene586;Dbxref=Genbank:YP_001034566.1,GeneID:4806910;Name=YP_001034566.1;Note=GC: 29.91%25%3B Codon Adaptation Index (CAI): 0.688. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034566.1;transl_table=11
NC_009009.1	RefSeq	gene	568891	569517	.	-	.	ID=gene587;Dbxref=GeneID:4807582;Name=SSA_0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0574
NC_009009.1	RefSeq	CDS	568891	569517	.	-	0	ID=cds546;Parent=gene587;Dbxref=Genbank:YP_001034567.1,GeneID:4807582;Name=YP_001034567.1;Note=GC: 46.41%25%3B Transporter classification TC:9.B.27.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Conserved%2C possibly membrane-associated. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034567.1;transl_table=11
NC_009009.1	RefSeq	gene	569667	570176	.	+	.	ID=gene588;Dbxref=GeneID:4805928;Name=SSA_0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0575
NC_009009.1	RefSeq	CDS	569667	570176	.	+	0	ID=cds547;Parent=gene588;Dbxref=Genbank:YP_001034568.1,GeneID:4805928;Name=YP_001034568.1;Note=GC: 45.69%25%3B Codon Adaptation Index (CAI): 0.762. Curator(s): D. Akan.;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=YP_001034568.1;transl_table=11
NC_009009.1	RefSeq	gene	570179	571285	.	+	.	ID=gene589;Dbxref=GeneID:4807550;Name=SSA_0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0576
NC_009009.1	RefSeq	CDS	570179	571285	.	+	0	ID=cds548;Parent=gene589;Dbxref=Genbank:YP_001034569.1,GeneID:4807550;Name=YP_001034569.1;Note=in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis;gbkey=CDS;product=GTP-binding protein YqeH;protein_id=YP_001034569.1;transl_table=11
NC_009009.1	RefSeq	gene	571393	571704	.	+	.	ID=gene590;Dbxref=GeneID:4807433;Name=SSA_0577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0577
NC_009009.1	RefSeq	CDS	571393	571704	.	+	0	ID=cds549;Parent=gene590;Dbxref=Genbank:YP_001034570.1,GeneID:4807433;Name=YP_001034570.1;Note=GC: 44.23%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034570.1;transl_table=11
NC_009009.1	RefSeq	gene	571731	572363	.	+	.	ID=gene591;Dbxref=GeneID:4807231;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=SSA_0578
NC_009009.1	RefSeq	CDS	571731	572363	.	+	0	ID=cds550;Parent=gene591;Dbxref=Genbank:YP_001034571.1,GeneID:4807231;Name=YP_001034571.1;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;gbkey=CDS;gene=nadD;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=YP_001034571.1;transl_table=11
NC_009009.1	RefSeq	gene	572360	572959	.	+	.	ID=gene592;Dbxref=GeneID:4807512;Name=SSA_0579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0579
NC_009009.1	RefSeq	CDS	572360	572959	.	+	0	ID=cds551;Parent=gene592;Dbxref=Genbank:YP_001034572.1,GeneID:4807512;Name=YP_001034572.1;Note=GC: 49.5%25%3B Codon Adaptation Index (CAI): 0.731. Curator(s): D. Akan.;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=YP_001034572.1;transl_table=11
NC_009009.1	RefSeq	gene	572956	573459	.	+	.	ID=gene593;Dbxref=GeneID:4808048;Name=SSA_0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0580
NC_009009.1	RefSeq	CDS	572956	573459	.	+	0	ID=cds552;Parent=gene593;Dbxref=Genbank:YP_001034573.1,GeneID:4808048;Name=YP_001034573.1;Note=GC: 33.73%25%3B Codon Adaptation Index (CAI): 0.825. Curator(s): D. Akan.;gbkey=CDS;product=isochorismatase family protein;protein_id=YP_001034573.1;transl_table=11
NC_009009.1	RefSeq	gene	573469	573834	.	+	.	ID=gene594;Dbxref=GeneID:4807115;Name=SSA_0581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0581
NC_009009.1	RefSeq	CDS	573469	573834	.	+	0	ID=cds553;Parent=gene594;Dbxref=Genbank:YP_001034574.1,GeneID:4807115;Name=YP_001034574.1;Note=GC: 47.81%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034574.1;transl_table=11
NC_009009.1	RefSeq	gene	573909	574643	.	+	.	ID=gene595;Dbxref=GeneID:4805855;Name=SSA_0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0582
NC_009009.1	RefSeq	CDS	573909	574643	.	+	0	ID=cds554;Parent=gene595;Dbxref=Genbank:YP_001034575.1,GeneID:4805855;Name=YP_001034575.1;Note=GC: 47.62%25%3B Codon Adaptation Index (CAI): 0.785. Possibly involved in ubiquinone/ menaquinone biosynthesis. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=methylase;protein_id=YP_001034575.1;transl_table=11
NC_009009.1	RefSeq	gene	574645	575739	.	+	.	ID=gene596;Dbxref=GeneID:4807983;Name=SSA_0583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0583
NC_009009.1	RefSeq	CDS	574645	575739	.	+	0	ID=cds555;Parent=gene596;Dbxref=Genbank:YP_001034576.1,GeneID:4807983;Name=YP_001034576.1;Note=GC: 48.77%25%3B Codon Adaptation Index (CAI): 0.76. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034576.1;transl_table=11
NC_009009.1	RefSeq	gene	575946	576749	.	+	.	ID=gene597;Dbxref=GeneID:4807476;Name=SSA_0584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0584
NC_009009.1	RefSeq	CDS	575946	576749	.	+	0	ID=cds556;Parent=gene597;Dbxref=Genbank:YP_001034577.1,GeneID:4807476;Name=YP_001034577.1;Note=GC: 38.81%25%3B Codon Adaptation Index (CAI): 0.808. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.91)%3B Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034577.1;transl_table=11
NC_009009.1	RefSeq	gene	577077	577346	.	+	.	ID=gene598;Dbxref=GeneID:4807616;Name=SSA_0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0585
NC_009009.1	RefSeq	CDS	577077	577346	.	+	0	ID=cds557;Parent=gene598;Dbxref=Genbank:YP_001034578.1,GeneID:4807616;Name=YP_001034578.1;Note=GC: 45.56%25%3B Codon Adaptation Index (CAI): 0.748. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034578.1;transl_table=11
NC_009009.1	RefSeq	gene	577587	578303	.	+	.	ID=gene599;Dbxref=GeneID:4806275;Name=SSA_0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0586
NC_009009.1	RefSeq	CDS	577587	578303	.	+	0	ID=cds558;Parent=gene599;Dbxref=Genbank:YP_001034579.1,GeneID:4806275;Name=YP_001034579.1;Note=GC: 43.93%25%3B Codon Adaptation Index (CAI): 0.82. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034579.1;transl_table=11
NC_009009.1	RefSeq	gene	578679	579821	.	+	.	ID=gene600;Dbxref=GeneID:4805977;Name=hipO1;gbkey=Gene;gene=hipO1;gene_biotype=protein_coding;locus_tag=SSA_0587
NC_009009.1	RefSeq	CDS	578679	579821	.	+	0	ID=cds559;Parent=gene600;Dbxref=Genbank:YP_001034580.1,GeneID:4805977;Name=YP_001034580.1;Note=GC: 49.78%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): D. Akan.;gbkey=CDS;gene=hipO1;product=metal-dependent amidase/aminoacylase/carboxypeptidase;protein_id=YP_001034580.1;transl_table=11
NC_009009.1	RefSeq	gene	579940	580767	.	+	.	ID=gene601;Dbxref=GeneID:4806902;Name=SSA_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0588
NC_009009.1	RefSeq	CDS	579940	580767	.	+	0	ID=cds560;Parent=gene601;Dbxref=Genbank:YP_001034581.1,GeneID:4806902;Name=YP_001034581.1;Note=GC: 43%25%3B Transporter classification TC:3.A.1.3.14. Codon Adaptation Index (CAI): 0.792. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=L-cystine ABC transporter substrate-binding component;protein_id=YP_001034581.1;transl_table=11
NC_009009.1	RefSeq	gene	580885	582267	.	+	.	ID=gene602;Dbxref=GeneID:4807437;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=SSA_0589
NC_009009.1	RefSeq	CDS	580885	582267	.	+	0	ID=cds561;Parent=gene602;Dbxref=Genbank:YP_001034582.1,GeneID:4807437;Name=YP_001034582.1;Note=GC: 47.07%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=dapE;product=acetylornithine deacetylase;protein_id=YP_001034582.1;transl_table=11
NC_009009.1	RefSeq	gene	582284	582877	.	+	.	ID=gene603;Dbxref=GeneID:4807329;Name=SSA_0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0590
NC_009009.1	RefSeq	CDS	582284	582877	.	+	0	ID=cds562;Parent=gene603;Dbxref=Genbank:YP_001034583.1,GeneID:4807329;Name=YP_001034583.1;Note=GC: 44.44%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.733. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034583.1;transl_table=11
NC_009009.1	RefSeq	gene	582909	583754	.	+	.	ID=gene604;Dbxref=GeneID:4807029;Name=SSA_0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0591
NC_009009.1	RefSeq	CDS	582909	583754	.	+	0	ID=cds563;Parent=gene604;Dbxref=Genbank:YP_001034584.1,GeneID:4807029;Name=YP_001034584.1;Note=GC: 47.16%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034584.1;transl_table=11
NC_009009.1	RefSeq	gene	583766	584308	.	+	.	ID=gene605;Dbxref=GeneID:4807224;Name=SSA_0592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0592
NC_009009.1	RefSeq	CDS	583766	584308	.	+	0	ID=cds564;Parent=gene605;Dbxref=Genbank:YP_001034585.1,GeneID:4807224;Name=YP_001034585.1;Note=GC: 46.78%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.768. SignalP prediction: Yes (prob. 0.924)%3B Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034585.1;transl_table=11
NC_009009.1	RefSeq	gene	584625	585611	.	+	.	ID=gene606;Dbxref=GeneID:4807766;Name=SSA_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0593
NC_009009.1	RefSeq	CDS	584625	585611	.	+	0	ID=cds565;Parent=gene606;Dbxref=Genbank:YP_001034586.1,GeneID:4807766;Name=YP_001034586.1;Note=GC: 46.1%25%3B Codon Adaptation Index (CAI): 0.799. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034586.1;transl_table=11
NC_009009.1	RefSeq	gene	585770	586573	.	+	.	ID=gene607;Dbxref=GeneID:4807874;Name=SSA_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0594
NC_009009.1	RefSeq	CDS	585770	586573	.	+	0	ID=cds566;Parent=gene607;Dbxref=Genbank:YP_001034587.1,GeneID:4807874;Name=YP_001034587.1;Note=GC: 43.66%25%3B Codon Adaptation Index (CAI): 0.78. Helix-turn-helix prediction: AraC. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_001034587.1;transl_table=11
NC_009009.1	RefSeq	gene	586630	587043	.	+	.	ID=gene608;Dbxref=GeneID:4806489;Name=SSA_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0595
NC_009009.1	RefSeq	CDS	586630	587043	.	+	0	ID=cds567;Parent=gene608;Dbxref=Genbank:YP_001034588.1,GeneID:4806489;Name=YP_001034588.1;Note=GC: 43%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034588.1;transl_table=11
NC_009009.1	RefSeq	gene	587053	587412	.	+	.	ID=gene609;Dbxref=GeneID:4807104;Name=SSA_0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0596
NC_009009.1	RefSeq	CDS	587053	587412	.	+	0	ID=cds568;Parent=gene609;Dbxref=Genbank:YP_001034589.1,GeneID:4807104;Name=YP_001034589.1;Note=GC: 42.78%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034589.1;transl_table=11
NC_009009.1	RefSeq	gene	587706	588623	.	+	.	ID=gene610;Dbxref=GeneID:4805921;Name=SSA_0597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0597
NC_009009.1	RefSeq	CDS	587706	588623	.	+	0	ID=cds569;Parent=gene610;Dbxref=Genbank:YP_001034590.1,GeneID:4805921;Name=YP_001034590.1;Note=GC: 46.41%25%3B Codon Adaptation Index (CAI): 0.792. Helix-turn-helix prediction: AraC. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034590.1;transl_table=11
NC_009009.1	RefSeq	gene	588807	589067	.	+	.	ID=gene611;Dbxref=GeneID:4807436;Name=SSA_0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0599
NC_009009.1	RefSeq	CDS	588807	589067	.	+	0	ID=cds570;Parent=gene611;Dbxref=Genbank:YP_001034591.1,GeneID:4807436;Name=YP_001034591.1;Note=GC: 41.76%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.799. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034591.1;transl_table=11
NC_009009.1	RefSeq	gene	589287	590048	.	+	.	ID=gene612;Dbxref=GeneID:4806941;Name=SSA_0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0601
NC_009009.1	RefSeq	CDS	589287	590048	.	+	0	ID=cds571;Parent=gene612;Dbxref=Genbank:YP_001034592.1,GeneID:4806941;Name=YP_001034592.1;Note=GC: 48.82%25%3B Codon Adaptation Index (CAI): 0.743. Curator(s): D. Akan.;gbkey=CDS;product=phosphorylase Pnp/Udp family protein;protein_id=YP_001034592.1;transl_table=11
NC_009009.1	RefSeq	gene	590058	591743	.	+	.	ID=gene613;Dbxref=GeneID:4806536;Name=SSA_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0602
NC_009009.1	RefSeq	CDS	590058	591743	.	+	0	ID=cds572;Parent=gene613;Dbxref=Genbank:YP_001034593.1,GeneID:4806536;Name=YP_001034593.1;Note=GC: 50%25%3B Transporter classification TC:3.A.1.18.1. Codon Adaptation Index (CAI): 0.771. Curator(s): D. Akan.;gbkey=CDS;product=cobalt ABC transporter ATPase;protein_id=YP_001034593.1;transl_table=11
NC_009009.1	RefSeq	gene	591736	592572	.	+	.	ID=gene614;Dbxref=GeneID:4807760;Name=SSA_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0603
NC_009009.1	RefSeq	CDS	591736	592572	.	+	0	ID=cds573;Parent=gene614;Dbxref=Genbank:YP_001034594.1,GeneID:4807760;Name=YP_001034594.1;Note=GC: 47.55%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.736. Curator(s): D. Akan.;gbkey=CDS;product=cobalt ABC transporter;protein_id=YP_001034594.1;transl_table=11
NC_009009.1	RefSeq	gene	592591	593052	.	+	.	ID=gene615;Dbxref=GeneID:4807247;Name=SSA_0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0604
NC_009009.1	RefSeq	CDS	592591	593052	.	+	0	ID=cds574;Parent=gene615;Dbxref=Genbank:YP_001034595.1,GeneID:4807247;Name=YP_001034595.1;Note=GC: 37.45%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): D. Akan.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034595.1;transl_table=11
NC_009009.1	RefSeq	gene	593084	593797	.	-	.	ID=gene616;Dbxref=GeneID:4805811;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=SSA_0605
NC_009009.1	RefSeq	CDS	593084	593797	.	-	0	ID=cds575;Parent=gene616;Dbxref=Genbank:YP_001034596.1,GeneID:4805811;Name=YP_001034596.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=YP_001034596.1;transl_table=11
NC_009009.1	RefSeq	gene	593879	594622	.	-	.	ID=gene617;Dbxref=GeneID:4807427;Name=SSA_0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0606
NC_009009.1	RefSeq	CDS	593879	594622	.	-	0	ID=cds576;Parent=gene617;Dbxref=Genbank:YP_001034597.1,GeneID:4807427;Name=YP_001034597.1;Note=GC: 49.33%25%3B Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.735. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001034597.1;transl_table=11
NC_009009.1	RefSeq	gene	594680	597016	.	-	.	ID=gene618;Dbxref=GeneID:4806938;Name=SSA_0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0607
NC_009009.1	RefSeq	CDS	594680	597016	.	-	0	ID=cds577;Parent=gene618;Dbxref=Genbank:YP_001034598.1,GeneID:4806938;Name=YP_001034598.1;Note=GC: 46.94%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.754. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001034598.1;transl_table=11
NC_009009.1	RefSeq	gene	596991	598274	.	-	.	ID=gene619;Dbxref=GeneID:4807163;Name=mefE;gbkey=Gene;gene=mefE;gene_biotype=protein_coding;locus_tag=SSA_0608
NC_009009.1	RefSeq	CDS	596991	598274	.	-	0	ID=cds578;Parent=gene619;Dbxref=Genbank:YP_001034599.1,GeneID:4807163;Name=YP_001034599.1;Note=GC: 45.79%25%3B Transporter classification TC:2.A.1.21.1. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.759. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;gene=mefE;product=macrolide-efflux protein;protein_id=YP_001034599.1;transl_table=11
NC_009009.1	RefSeq	gene	598337	598954	.	-	.	ID=gene620;Dbxref=GeneID:4807166;Name=SSA_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0609
NC_009009.1	RefSeq	CDS	598337	598954	.	-	0	ID=cds579;Parent=gene620;Dbxref=Genbank:YP_001034600.1,GeneID:4807166;Name=YP_001034600.1;Note=GC: 43.2%25%3B Codon Adaptation Index (CAI): 0.759. Curator(s): D. Akan %2C J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001034600.1;transl_table=11
NC_009009.1	RefSeq	gene	599108	599677	.	+	.	ID=gene621;Dbxref=GeneID:4806381;Name=lemA;gbkey=Gene;gene=lemA;gene_biotype=protein_coding;locus_tag=SSA_0610
NC_009009.1	RefSeq	CDS	599108	599677	.	+	0	ID=cds580;Parent=gene621;Dbxref=Genbank:YP_001034601.1,GeneID:4806381;Name=YP_001034601.1;Note=GC: 43.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.819. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.791)%3B Curator(s): D. Akan.;gbkey=CDS;gene=lemA;product=LemA-like protein;protein_id=YP_001034601.1;transl_table=11
NC_009009.1	RefSeq	gene	599679	600575	.	+	.	ID=gene622;Dbxref=GeneID:4807957;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=SSA_0611
NC_009009.1	RefSeq	CDS	599679	600575	.	+	0	ID=cds581;Parent=gene622;Dbxref=Genbank:YP_001034602.1,GeneID:4807957;Name=YP_001034602.1;Note=metalloprotease;gbkey=CDS;gene=htpX;product=heat shock protein HtpX;protein_id=YP_001034602.1;transl_table=11
NC_009009.1	RefSeq	gene	601036	601917	.	+	.	ID=gene623;Dbxref=GeneID:4805845;Name=rgg;gbkey=Gene;gene=rgg;gene_biotype=protein_coding;locus_tag=SSA_0612
NC_009009.1	RefSeq	CDS	601036	601917	.	+	0	ID=cds582;Parent=gene623;Dbxref=Genbank:YP_001034603.1,GeneID:4805845;Name=YP_001034603.1;Note=GC: 39.8%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): P. Xu;gbkey=CDS;gene=rgg;product=Rgg protein;protein_id=YP_001034603.1;transl_table=11
NC_009009.1	RefSeq	gene	601987	606693	.	+	.	ID=gene624;Dbxref=GeneID:4807052;Name=gtfP;gbkey=Gene;gene=gtfP;gene_biotype=protein_coding;locus_tag=SSA_0613
NC_009009.1	RefSeq	CDS	601987	606693	.	+	0	ID=cds583;Parent=gene624;Dbxref=Genbank:YP_001034604.1,GeneID:4807052;Name=YP_001034604.1;Note=GC: 44.13%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998)%3B Curator(s): P. Xu;gbkey=CDS;gene=gtfP;product=glucosyltransferase;protein_id=YP_001034604.1;transl_table=11
NC_009009.1	RefSeq	gene	606823	608064	.	-	.	ID=gene625;Dbxref=GeneID:4807307;Name=SSA_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0614
NC_009009.1	RefSeq	CDS	606823	608064	.	-	0	ID=cds584;Parent=gene625;Dbxref=Genbank:YP_001034605.1,GeneID:4807307;Name=YP_001034605.1;Note=GC: 43.8%25%3B Transporter classification TC:2.A.1.47.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.754. SignalP prediction: Yes (prob. 0.955)%3B Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=transporter;protein_id=YP_001034605.1;transl_table=11
NC_009009.1	RefSeq	gene	608416	609285	.	-	.	ID=gene626;Dbxref=GeneID:4806754;Name=rggD;gbkey=Gene;gene=rggD;gene_biotype=protein_coding;locus_tag=SSA_0615
NC_009009.1	RefSeq	CDS	608416	609285	.	-	0	ID=cds585;Parent=gene626;Dbxref=Genbank:YP_001034606.1,GeneID:4806754;Name=YP_001034606.1;Note=GC: 43.56%25%3B Codon Adaptation Index (CAI): 0.761. Helix-turn-helix prediction: AraC. Curator(s): P. Xu;gbkey=CDS;gene=rggD;product=RggD;protein_id=YP_001034606.1;transl_table=11
NC_009009.1	RefSeq	gene	609385	609915	.	+	.	ID=gene627;Dbxref=GeneID:4807382;Name=SSA_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0616
NC_009009.1	RefSeq	CDS	609385	609915	.	+	0	ID=cds586;Parent=gene627;Dbxref=Genbank:YP_001034607.1,GeneID:4807382;Name=YP_001034607.1;Note=GC: 43.31%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034607.1;transl_table=11
NC_009009.1	RefSeq	gene	610020	611498	.	+	.	ID=gene628;Dbxref=GeneID:4806525;Name=SSA_0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0617
NC_009009.1	RefSeq	CDS	610020	611498	.	+	0	ID=cds587;Parent=gene628;Dbxref=Genbank:YP_001034608.1,GeneID:4806525;Name=YP_001034608.1;Note=GC: 44.83%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.805. SignalP prediction: Yes (prob. 0.698)%3B Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=membrane protease subunit;protein_id=YP_001034608.1;transl_table=11
NC_009009.1	RefSeq	gene	611770	612063	.	-	.	ID=gene629;Dbxref=GeneID:4807635;Name=SSA_0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0618
NC_009009.1	RefSeq	CDS	611770	612063	.	-	0	ID=cds588;Parent=gene629;Dbxref=Genbank:YP_001034609.1,GeneID:4807635;Name=YP_001034609.1;Note=GC: 40.48%25%3B Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034609.1;transl_table=11
NC_009009.1	RefSeq	gene	612041	612415	.	-	.	ID=gene630;Dbxref=GeneID:4807948;Name=SSA_0620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0620
NC_009009.1	RefSeq	CDS	612041	612415	.	-	0	ID=cds589;Parent=gene630;Dbxref=Genbank:YP_001034610.1,GeneID:4807948;Name=YP_001034610.1;Note=GC: 48.27%25%3B Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034610.1;transl_table=11
NC_009009.1	RefSeq	gene	612412	613827	.	-	.	ID=gene631;Dbxref=GeneID:4805941;Name=SSA_0621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0621
NC_009009.1	RefSeq	CDS	612412	613827	.	-	0	ID=cds590;Parent=gene631;Dbxref=Genbank:YP_001034611.1,GeneID:4805941;Name=YP_001034611.1;Note=GC: 48.31%25%3B Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu;gbkey=CDS;product=SOS responce UmuC protein;protein_id=YP_001034611.1;transl_table=11
NC_009009.1	RefSeq	gene	613832	614509	.	-	.	ID=gene632;Dbxref=GeneID:4807302;Name=SSA_0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0622
NC_009009.1	RefSeq	CDS	613832	614509	.	-	0	ID=cds591;Parent=gene632;Dbxref=Genbank:YP_001034612.1,GeneID:4807302;Name=YP_001034612.1;Note=GC: 46.02%25%3B Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034612.1;transl_table=11
NC_009009.1	RefSeq	gene	614652	615140	.	+	.	ID=gene633;Dbxref=GeneID:4806879;Name=SSA_0623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0623
NC_009009.1	RefSeq	CDS	614652	615140	.	+	0	ID=cds592;Parent=gene633;Dbxref=Genbank:YP_001034613.1,GeneID:4806879;Name=YP_001034613.1;Note=GC: 39.06%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034613.1;transl_table=11
NC_009009.1	RefSeq	gene	615219	615758	.	+	.	ID=gene634;Dbxref=GeneID:4807854;Name=SSA_0624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0624
NC_009009.1	RefSeq	CDS	615219	615758	.	+	0	ID=cds593;Parent=gene634;Dbxref=Genbank:YP_001034614.1,GeneID:4807854;Name=YP_001034614.1;Note=GC: 48.7%25%3B Codon Adaptation Index (CAI): 0.759. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034614.1;transl_table=11
NC_009009.1	RefSeq	gene	615748	616242	.	+	.	ID=gene635;Dbxref=GeneID:4807301;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SSA_0625
NC_009009.1	RefSeq	CDS	615748	616242	.	+	0	ID=cds594;Parent=gene635;Dbxref=Genbank:YP_001034615.1,GeneID:4807301;Name=YP_001034615.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=YP_001034615.1;transl_table=11
NC_009009.1	RefSeq	gene	616229	617272	.	+	.	ID=gene636;Dbxref=GeneID:4807417;Name=SSA_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0626
NC_009009.1	RefSeq	CDS	616229	617272	.	+	0	ID=cds595;Parent=gene636;Dbxref=Genbank:YP_001034616.1,GeneID:4807417;Name=YP_001034616.1;Note=GC: 46.07%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.772. SignalP prediction: Yes (prob. 0.451)%3B Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034616.1;transl_table=11
NC_009009.1	RefSeq	gene	617454	618035	.	+	.	ID=gene637;Dbxref=GeneID:4807066;Name=SSA_0627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0627
NC_009009.1	RefSeq	CDS	617454	618035	.	+	0	ID=cds596;Parent=gene637;Dbxref=Genbank:YP_001034617.1,GeneID:4807066;Name=YP_001034617.1;Note=GC: 43.3%25%3B Codon Adaptation Index (CAI): 0.821. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034617.1;transl_table=11
NC_009009.1	RefSeq	gene	618032	619120	.	+	.	ID=gene638;Dbxref=GeneID:4806055;Name=SSA_0628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0628
NC_009009.1	RefSeq	CDS	618032	619120	.	+	0	ID=cds597;Parent=gene638;Dbxref=Genbank:YP_001034618.1,GeneID:4806055;Name=YP_001034618.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase N;protein_id=YP_001034618.1;transl_table=11
NC_009009.1	RefSeq	gene	619107	619646	.	+	.	ID=gene639;Dbxref=GeneID:4807318;Name=SSA_0629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0629
NC_009009.1	RefSeq	CDS	619107	619646	.	+	0	ID=cds598;Parent=gene639;Dbxref=Genbank:YP_001034619.1,GeneID:4807318;Name=YP_001034619.1;Note=GC: 43.52%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.784. Helix-turn-helix prediction: AraC. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034619.1;transl_table=11
NC_009009.1	RefSeq	gene	620012	621193	.	+	.	ID=gene640;Dbxref=GeneID:4807060;Name=trpB2;gbkey=Gene;gene=trpB2;gene_biotype=protein_coding;locus_tag=SSA_0631
NC_009009.1	RefSeq	CDS	620012	621193	.	+	0	ID=cds599;Parent=gene640;Dbxref=Genbank:YP_001034620.1,GeneID:4807060;Name=YP_001034620.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;gene=trpB2;product=tryptophan synthase subunit beta;protein_id=YP_001034620.1;transl_table=11
NC_009009.1	RefSeq	gene	621598	622956	.	+	.	ID=gene641;Dbxref=GeneID:4806215;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=SSA_0632
NC_009009.1	RefSeq	CDS	621598	622956	.	+	0	ID=cds600;Parent=gene641;Dbxref=Genbank:YP_001034621.1,GeneID:4806215;Name=YP_001034621.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;gene=trpE;product=anthranilate synthase component I;protein_id=YP_001034621.1;transl_table=11
NC_009009.1	RefSeq	gene	622953	623516	.	+	.	ID=gene642;Dbxref=GeneID:4806024;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=SSA_0633
NC_009009.1	RefSeq	CDS	622953	623516	.	+	0	ID=cds601;Parent=gene642;Dbxref=Genbank:YP_001034622.1,GeneID:4806024;Name=YP_001034622.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;gene=trpG;product=anthranilate synthase component II;protein_id=YP_001034622.1;transl_table=11
NC_009009.1	RefSeq	gene	623527	624531	.	+	.	ID=gene643;Dbxref=GeneID:4807159;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=SSA_0634
NC_009009.1	RefSeq	CDS	623527	624531	.	+	0	ID=cds602;Parent=gene643;Dbxref=Genbank:YP_001034623.1,GeneID:4807159;Name=YP_001034623.1;Note=Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=trpD;product=anthranilate phosphoribosyltransferase;protein_id=YP_001034623.1;transl_table=11
NC_009009.1	RefSeq	gene	624528	625295	.	+	.	ID=gene644;Dbxref=GeneID:4806581;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=SSA_0635
NC_009009.1	RefSeq	CDS	624528	625295	.	+	0	ID=cds603;Parent=gene644;Dbxref=Genbank:YP_001034624.1,GeneID:4806581;Name=YP_001034624.1;Note=involved in tryptophan biosynthesis%3B amino acid biosynthesis%3B converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water;gbkey=CDS;gene=trpC;product=indole-3-glycerol phosphate synthase;protein_id=YP_001034624.1;transl_table=11
NC_009009.1	RefSeq	gene	625324	625869	.	+	.	ID=gene645;Dbxref=GeneID:4806034;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=SSA_0636
NC_009009.1	RefSeq	CDS	625324	625869	.	+	0	ID=cds604;Parent=gene645;Dbxref=Genbank:YP_001034625.1,GeneID:4806034;Name=YP_001034625.1;Note=catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis;gbkey=CDS;gene=trpF;product=N-(5'-phosphoribosyl)anthranilate isomerase;protein_id=YP_001034625.1;transl_table=11
NC_009009.1	RefSeq	gene	625859	627082	.	+	.	ID=gene646;Dbxref=GeneID:4806389;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=SSA_0637
NC_009009.1	RefSeq	CDS	625859	627082	.	+	0	ID=cds605;Parent=gene646;Dbxref=Genbank:YP_001034626.1,GeneID:4806389;Name=YP_001034626.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;gene=trpB;product=tryptophan synthase subunit beta;protein_id=YP_001034626.1;transl_table=11
NC_009009.1	RefSeq	gene	627075	627854	.	+	.	ID=gene647;Dbxref=GeneID:4806759;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=SSA_0638
NC_009009.1	RefSeq	CDS	627075	627854	.	+	0	ID=cds606;Parent=gene647;Dbxref=Genbank:YP_001034627.1,GeneID:4806759;Name=YP_001034627.1;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;gbkey=CDS;gene=trpA;product=tryptophan synthase subunit alpha;protein_id=YP_001034627.1;transl_table=11
NC_009009.1	RefSeq	gene	627823	627996	.	-	.	ID=gene648;Dbxref=GeneID:4806028;Name=SSA_0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0639
NC_009009.1	RefSeq	CDS	627823	627996	.	-	0	ID=cds607;Parent=gene648;Dbxref=Genbank:YP_001034628.1,GeneID:4806028;Name=YP_001034628.1;Note=GC: 40.23%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.755. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034628.1;transl_table=11
NC_009009.1	RefSeq	gene	628060	628959	.	-	.	ID=gene649;Dbxref=GeneID:4806682;Name=SSA_0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0640
NC_009009.1	RefSeq	CDS	628060	628959	.	-	0	ID=cds608;Parent=gene649;Dbxref=Genbank:YP_001034629.1,GeneID:4806682;Name=YP_001034629.1;Note=GC: 34.78%25%3B Codon Adaptation Index (CAI): 0.773. Helix-turn-helix prediction: AraC. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034629.1;transl_table=11
NC_009009.1	RefSeq	gene	629038	629487	.	+	.	ID=gene650;Dbxref=GeneID:4806136;Name=SSA_0641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0641
NC_009009.1	RefSeq	CDS	629038	629487	.	+	0	ID=cds609;Parent=gene650;Dbxref=Genbank:YP_001034630.1,GeneID:4806136;Name=YP_001034630.1;Note=GC: 40%25%3B Codon Adaptation Index (CAI): 0.748. Weakly similar to DNA-binding proteins. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034630.1;transl_table=11
NC_009009.1	RefSeq	gene	629481	630143	.	-	.	ID=gene651;Dbxref=GeneID:4805943;Name=pilD;gbkey=Gene;gene=pilD;gene_biotype=protein_coding;locus_tag=SSA_0642
NC_009009.1	RefSeq	CDS	629481	630143	.	-	0	ID=cds610;Parent=gene651;Dbxref=Genbank:YP_001034631.1,GeneID:4805943;Name=YP_001034631.1;Note=GC: 44.19%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.709. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;gene=pilD;product=Type 4 prepilin peptidase;protein_id=YP_001034631.1;transl_table=11
NC_009009.1	RefSeq	gene	630162	630284	.	-	.	ID=gene652;Dbxref=GeneID:4806352;Name=SSA_0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0643
NC_009009.1	RefSeq	CDS	630162	630284	.	-	0	ID=cds611;Parent=gene652;Dbxref=Genbank:YP_001034632.1,GeneID:4806352;Name=YP_001034632.1;Note=GC: 21.14%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034632.1;transl_table=11
NC_009009.1	RefSeq	gene	630310	630825	.	+	.	ID=gene653;Dbxref=GeneID:4805837;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;locus_tag=SSA_0644
NC_009009.1	RefSeq	CDS	630310	630825	.	+	0	ID=cds612;Parent=gene653;Dbxref=Genbank:YP_001034633.1,GeneID:4805837;Name=YP_001034633.1;Note=GC: 42.25%25%3B Codon Adaptation Index (CAI): 0.828. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;gene=dps;product=DNA protection protein;protein_id=YP_001034633.1;transl_table=11
NC_009009.1	RefSeq	gene	630918	631136	.	+	.	ID=gene654;Dbxref=GeneID:4806829;Name=SSA_0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0646
NC_009009.1	RefSeq	CDS	630918	631136	.	+	0	ID=cds613;Parent=gene654;Dbxref=Genbank:YP_001034634.1,GeneID:4806829;Name=YP_001034634.1;Note=GC: 38.36%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034634.1;transl_table=11
NC_009009.1	RefSeq	gene	631138	631518	.	+	.	ID=gene655;Dbxref=GeneID:4807303;Name=SSA_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0647
NC_009009.1	RefSeq	CDS	631138	631518	.	+	0	ID=cds614;Parent=gene655;Dbxref=Genbank:YP_001034635.1,GeneID:4807303;Name=YP_001034635.1;Note=GC: 42.78%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.818. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034635.1;transl_table=11
NC_009009.1	RefSeq	gene	631608	631835	.	+	.	ID=gene656;Dbxref=GeneID:4806805;Name=SSA_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0648
NC_009009.1	RefSeq	CDS	631608	631835	.	+	0	ID=cds615;Parent=gene656;Dbxref=Genbank:YP_001034636.1,GeneID:4806805;Name=YP_001034636.1;Note=GC: 32.02%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.808. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034636.1;transl_table=11
NC_009009.1	RefSeq	gene	631910	632635	.	-	.	ID=gene657;Dbxref=GeneID:4805997;Name=SSA_0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0649
NC_009009.1	RefSeq	CDS	631910	632635	.	-	0	ID=cds616;Parent=gene657;Dbxref=Genbank:YP_001034637.1,GeneID:4805997;Name=YP_001034637.1;Note=GC: 44.21%25%3B Codon Adaptation Index (CAI): 0.799. Helix-turn-helix prediction: AraC. Curator(s): P. Xu;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=YP_001034637.1;transl_table=11
NC_009009.1	RefSeq	gene	632688	634664	.	+	.	ID=gene658;Dbxref=GeneID:4807422;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=SSA_0650
NC_009009.1	RefSeq	CDS	632688	634664	.	+	0	ID=cds617;Parent=gene658;Dbxref=Genbank:YP_001034638.1,GeneID:4807422;Name=YP_001034638.1;Note=GC: 42.79%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): P. Xu;gbkey=CDS;gene=typA;product=GTP-binding protein TypA;protein_id=YP_001034638.1;transl_table=11
NC_009009.1	RefSeq	gene	634688	634957	.	+	.	ID=gene659;Dbxref=GeneID:4806503;Name=SSA_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0651
NC_009009.1	RefSeq	CDS	634688	634957	.	+	0	ID=cds618;Parent=gene659;Dbxref=Genbank:YP_001034639.1,GeneID:4806503;Name=YP_001034639.1;Note=GC: 35.93%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.793. SignalP prediction: Yes (prob. 0.719)%3B Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034639.1;transl_table=11
NC_009009.1	RefSeq	gene	635176	636528	.	+	.	ID=gene660;Dbxref=GeneID:4806792;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SSA_0652
NC_009009.1	RefSeq	CDS	635176	636528	.	+	0	ID=cds619;Parent=gene660;Dbxref=Genbank:YP_001034640.1,GeneID:4806792;Name=YP_001034640.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=YP_001034640.1;transl_table=11
NC_009009.1	RefSeq	gene	636530	637600	.	+	.	ID=gene661;Dbxref=GeneID:4808058;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SSA_0653
NC_009009.1	RefSeq	CDS	636530	637600	.	+	0	ID=cds620;Parent=gene661;Dbxref=Genbank:YP_001034641.1,GeneID:4808058;Name=YP_001034641.1;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=YP_001034641.1;transl_table=11
NC_009009.1	RefSeq	gene	637597	638802	.	+	.	ID=gene662;Dbxref=GeneID:4806699;Name=divIB;gbkey=Gene;gene=divIB;gene_biotype=protein_coding;locus_tag=SSA_0654
NC_009009.1	RefSeq	CDS	637597	638802	.	+	0	ID=cds621;Parent=gene662;Dbxref=Genbank:YP_001034642.1,GeneID:4806699;Name=YP_001034642.1;Note=GC: 41.71%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.805. Helix-turn-helix prediction: AraC. Curator(s): P. Xu;gbkey=CDS;gene=divIB;product=cell division protein DivIB;protein_id=YP_001034642.1;transl_table=11
NC_009009.1	RefSeq	gene	638924	640282	.	+	.	ID=gene663;Dbxref=GeneID:4807111;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SSA_0655
NC_009009.1	RefSeq	CDS	638924	640282	.	+	0	ID=cds622;Parent=gene663;Dbxref=Genbank:YP_001034643.1,GeneID:4807111;Name=YP_001034643.1;Note=GC: 44.59%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): P. Xu;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=YP_001034643.1;transl_table=11
NC_009009.1	RefSeq	gene	640299	641576	.	+	.	ID=gene664;Dbxref=GeneID:4806614;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=SSA_0656
NC_009009.1	RefSeq	CDS	640299	641576	.	+	0	ID=cds623;Parent=gene664;Dbxref=Genbank:YP_001034644.1,GeneID:4806614;Name=YP_001034644.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=YP_001034644.1;transl_table=11
NC_009009.1	RefSeq	gene	641585	642256	.	+	.	ID=gene665;Dbxref=GeneID:4806327;Name=SSA_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0657
NC_009009.1	RefSeq	CDS	641585	642256	.	+	0	ID=cds624;Parent=gene665;Dbxref=Genbank:YP_001034645.1,GeneID:4806327;Name=YP_001034645.1;Note=GC: 38.39%25%3B Codon Adaptation Index (CAI): 0.819. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=pyridoxal 5'-phosphate dependent enzymes class III;protein_id=YP_001034645.1;transl_table=11
NC_009009.1	RefSeq	gene	642266	642865	.	+	.	ID=gene666;Dbxref=GeneID:4807631;Name=SSA_0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0658
NC_009009.1	RefSeq	CDS	642266	642865	.	+	0	ID=cds625;Parent=gene666;Dbxref=Genbank:YP_001034646.1,GeneID:4807631;Name=YP_001034646.1;Note=GC: 45.17%25%3B Codon Adaptation Index (CAI): 0.805. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034646.1;transl_table=11
NC_009009.1	RefSeq	gene	643143	643928	.	+	.	ID=gene667;Dbxref=GeneID:4807633;Name=SSA_0659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0659
NC_009009.1	RefSeq	CDS	643143	643928	.	+	0	ID=cds626;Parent=gene667;Dbxref=Genbank:YP_001034647.1,GeneID:4807633;Name=YP_001034647.1;Note=GC: 40.08%25%3B Codon Adaptation Index (CAI): 0.793. Curator(s): P. Xu %2C J. Alves%3B contains S4-like RNA-binding domain;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034647.1;transl_table=11
NC_009009.1	RefSeq	gene	643938	644732	.	+	.	ID=gene668;Dbxref=GeneID:4806289;Name=divIVA;gbkey=Gene;gene=divIVA;gene_biotype=protein_coding;locus_tag=SSA_0660
NC_009009.1	RefSeq	CDS	643938	644732	.	+	0	ID=cds627;Parent=gene668;Dbxref=Genbank:YP_001034648.1,GeneID:4806289;Name=YP_001034648.1;Note=GC: 43.77%25%3B Codon Adaptation Index (CAI): 0.813. Curator(s): P. Xu;gbkey=CDS;gene=divIVA;product=cell division protein DivIVA;protein_id=YP_001034648.1;transl_table=11
NC_009009.1	RefSeq	gene	645016	647808	.	+	.	ID=gene669;Dbxref=GeneID:4806788;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SSA_0661
NC_009009.1	RefSeq	CDS	645016	647808	.	+	0	ID=cds628;Parent=gene669;Dbxref=Genbank:YP_001034649.1,GeneID:4806788;Name=YP_001034649.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=YP_001034649.1;transl_table=11
NC_009009.1	RefSeq	gene	647937	648392	.	-	.	ID=gene670;Dbxref=GeneID:4806101;Name=SSA_0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0662
NC_009009.1	RefSeq	CDS	647937	648392	.	-	0	ID=cds629;Parent=gene670;Dbxref=Genbank:YP_001034650.1,GeneID:4806101;Name=YP_001034650.1;Note=GC: 40.79%25%3B Codon Adaptation Index (CAI): 0.787. Helix-turn-helix prediction: AraC. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=multiple antibiotic resistance operon transcription repressor MarR;protein_id=YP_001034650.1;transl_table=11
NC_009009.1	RefSeq	gene	648492	648848	.	+	.	ID=gene671;Dbxref=GeneID:4806534;Name=SSA_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0663
NC_009009.1	RefSeq	CDS	648492	648848	.	+	0	ID=cds630;Parent=gene671;Dbxref=Genbank:YP_001034651.1,GeneID:4806534;Name=YP_001034651.1;Note=GC: 43.14%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): P. Xu;gbkey=CDS;product=acetyltransferase;protein_id=YP_001034651.1;transl_table=11
NC_009009.1	RefSeq	gene	648874	649176	.	-	.	ID=gene672;Dbxref=GeneID:4806800;Name=SSA_0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0664
NC_009009.1	RefSeq	CDS	648874	649176	.	-	0	ID=cds631;Parent=gene672;Dbxref=Genbank:YP_001034652.1,GeneID:4806800;Name=YP_001034652.1;Note=GC: 35.97%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034652.1;transl_table=11
NC_009009.1	RefSeq	gene	649244	649693	.	-	.	ID=gene673;Dbxref=GeneID:4805933;Name=SSA_0665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0665
NC_009009.1	RefSeq	CDS	649244	649693	.	-	0	ID=cds632;Parent=gene673;Dbxref=Genbank:YP_001034653.1,GeneID:4805933;Name=YP_001034653.1;Note=GC: 46.67%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=MutT/NUDIX family NTP pyrophosphohydrolase;protein_id=YP_001034653.1;transl_table=11
NC_009009.1	RefSeq	gene	649771	649878	.	-	.	ID=gene674;Dbxref=GeneID:4806657;Name=SSA_0666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0666
NC_009009.1	RefSeq	CDS	649771	649878	.	-	0	ID=cds633;Parent=gene674;Dbxref=Genbank:YP_001034654.1,GeneID:4806657;Name=YP_001034654.1;Note=GC: 32.41%25%3B Codon Adaptation Index (CAI): 0.818. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034654.1;transl_table=11
NC_009009.1	RefSeq	gene	649918	650817	.	+	.	ID=gene675;Dbxref=GeneID:4807684;Name=SSA_0667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0667
NC_009009.1	RefSeq	CDS	649918	650817	.	+	0	ID=cds634;Parent=gene675;Dbxref=Genbank:YP_001034655.1,GeneID:4807684;Name=YP_001034655.1;Note=GC: 43.11%25%3B Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=transcriptional regulator;protein_id=YP_001034655.1;transl_table=11
NC_009009.1	RefSeq	gene	650877	651491	.	+	.	ID=gene676;Dbxref=GeneID:4806446;Name=SSA_0668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0668
NC_009009.1	RefSeq	CDS	650877	651491	.	+	0	ID=cds635;Parent=gene676;Dbxref=Genbank:YP_001034656.1,GeneID:4806446;Name=YP_001034656.1;Note=GC: 42.11%25%3B Codon Adaptation Index (CAI): 0.799. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034656.1;transl_table=11
NC_009009.1	RefSeq	gene	651540	653810	.	-	.	ID=gene677;Dbxref=GeneID:4806764;Name=clpE;gbkey=Gene;gene=clpE;gene_biotype=protein_coding;locus_tag=SSA_0669
NC_009009.1	RefSeq	CDS	651540	653810	.	-	0	ID=cds636;Parent=gene677;Dbxref=Genbank:YP_001034657.1,GeneID:4806764;Name=YP_001034657.1;Note=GC: 49.01%25%3B Codon Adaptation Index (CAI): 0.786. Helix-turn-helix prediction: AraC. Curator(s): P. Xu;gbkey=CDS;gene=clpE;product=ATP dependent protease;protein_id=YP_001034657.1;transl_table=11
NC_009009.1	RefSeq	gene	654060	654290	.	+	.	ID=gene678;Dbxref=GeneID:4807764;Name=SSA_0670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0670
NC_009009.1	RefSeq	CDS	654060	654290	.	+	0	ID=cds637;Parent=gene678;Dbxref=Genbank:YP_001034658.1,GeneID:4807764;Name=YP_001034658.1;Note=GC: 39.83%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034658.1;transl_table=11
NC_009009.1	RefSeq	gene	654480	655334	.	+	.	ID=gene679;Dbxref=GeneID:4807081;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=SSA_0671
NC_009009.1	RefSeq	CDS	654480	655334	.	+	0	ID=cds638;Parent=gene679;Dbxref=Genbank:YP_001034659.1,GeneID:4807081;Name=YP_001034659.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;gene=folD;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=YP_001034659.1;transl_table=11
NC_009009.1	RefSeq	gene	655331	656104	.	+	.	ID=gene680;Dbxref=GeneID:4806936;Name=SSA_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0672
NC_009009.1	RefSeq	CDS	655331	656104	.	+	0	ID=cds639;Parent=gene680;Dbxref=Genbank:YP_001034660.1,GeneID:4806936;Name=YP_001034660.1;Note=GC: 42.89%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034660.1;transl_table=11
NC_009009.1	RefSeq	gene	656212	657054	.	+	.	ID=gene681;Dbxref=GeneID:4807332;Name=SSA_0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0673
NC_009009.1	RefSeq	CDS	656212	657054	.	+	0	ID=cds640;Parent=gene681;Dbxref=Genbank:YP_001034661.1,GeneID:4807332;Name=YP_001034661.1;Note=GC: 49.35%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.736. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034661.1;transl_table=11
NC_009009.1	RefSeq	gene	657211	658551	.	+	.	ID=gene682;Dbxref=GeneID:4806880;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SSA_0674
NC_009009.1	RefSeq	CDS	657211	658551	.	+	0	ID=cds641;Parent=gene682;Dbxref=Genbank:YP_001034662.1,GeneID:4806880;Name=YP_001034662.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=YP_001034662.1;transl_table=11
NC_009009.1	RefSeq	gene	658529	658741	.	+	.	ID=gene683;Dbxref=GeneID:4807141;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=SSA_0675
NC_009009.1	RefSeq	CDS	658529	658741	.	+	0	ID=cds642;Parent=gene683;Dbxref=Genbank:YP_001034663.1,GeneID:4807141;Name=YP_001034663.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;gene=xseB;product=exodeoxyribonuclease VII small subunit;protein_id=YP_001034663.1;transl_table=11
NC_009009.1	RefSeq	gene	658738	659613	.	+	.	ID=gene684;Dbxref=GeneID:4806887;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=SSA_0676
NC_009009.1	RefSeq	CDS	658738	659613	.	+	0	ID=cds643;Parent=gene684;Dbxref=Genbank:YP_001034664.1,GeneID:4806887;Name=YP_001034664.1;Note=GC: 46.8%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): P. Xu;gbkey=CDS;gene=ispA;product=farnesyl diphosphate synthase;protein_id=YP_001034664.1;transl_table=11
NC_009009.1	RefSeq	gene	659606	660421	.	+	.	ID=gene685;Dbxref=GeneID:4807061;Name=hlyA;gbkey=Gene;gene=hlyA;gene_biotype=protein_coding;locus_tag=SSA_0677
NC_009009.1	RefSeq	CDS	659606	660421	.	+	0	ID=cds644;Parent=gene685;Dbxref=Genbank:YP_001034665.1,GeneID:4807061;Name=YP_001034665.1;Note=GC: 49.26%25%3B Codon Adaptation Index (CAI): 0.779. Curator(s): P. Xu;gbkey=CDS;gene=hlyA;product=rRNA methylase;protein_id=YP_001034665.1;transl_table=11
NC_009009.1	RefSeq	gene	660414	660845	.	+	.	ID=gene686;Dbxref=GeneID:4806924;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;locus_tag=SSA_0678
NC_009009.1	RefSeq	CDS	660414	660845	.	+	0	ID=cds645;Parent=gene686;Dbxref=Genbank:YP_001034666.1,GeneID:4806924;Name=YP_001034666.1;Note=GC: 45.6%25%3B Codon Adaptation Index (CAI): 0.742. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;gene=ahrC;product=ArgR family transcriptional regulator;protein_id=YP_001034666.1;transl_table=11
NC_009009.1	RefSeq	gene	660854	662512	.	+	.	ID=gene687;Dbxref=GeneID:4806929;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=SSA_0679
NC_009009.1	RefSeq	CDS	660854	662512	.	+	0	ID=cds646;Parent=gene687;Dbxref=Genbank:YP_001034667.1,GeneID:4806929;Name=YP_001034667.1;Note=GC: 48.04%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): P. Xu;gbkey=CDS;gene=recN;product=DNA repair and genetic recombination;protein_id=YP_001034667.1;transl_table=11
NC_009009.1	RefSeq	gene	662565	663293	.	+	.	ID=gene688;Dbxref=GeneID:4806967;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=SSA_0680
NC_009009.1	RefSeq	CDS	662565	663293	.	+	0	ID=cds647;Parent=gene688;Dbxref=Genbank:YP_001034668.1,GeneID:4806967;Name=YP_001034668.1;Note=GC: 46.36%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): P. Xu;gbkey=CDS;gene=pphA;product=serine/threonine protein phosphatase;protein_id=YP_001034668.1;transl_table=11
NC_009009.1	RefSeq	gene	663578	664411	.	+	.	ID=gene689;Dbxref=GeneID:4806900;Name=SSA_0682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0682
NC_009009.1	RefSeq	CDS	663578	664411	.	+	0	ID=cds648;Parent=gene689;Dbxref=Genbank:YP_001034669.1,GeneID:4806900;Name=YP_001034669.1;Note=GC: 45.2%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034669.1;transl_table=11
NC_009009.1	RefSeq	gene	664524	664799	.	+	.	ID=gene690;Dbxref=GeneID:4807222;Name=SSA_0683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0683
NC_009009.1	RefSeq	CDS	664524	664799	.	+	0	ID=cds649;Parent=gene690;Dbxref=Genbank:YP_001034670.1,GeneID:4807222;Name=YP_001034670.1;Note=GC: 39.49%25%3B Codon Adaptation Index (CAI): 0.795. Curator(s): P. Xu;gbkey=CDS;product=DNA-binding protein HU;protein_id=YP_001034670.1;transl_table=11
NC_009009.1	RefSeq	gene	665132	668953	.	+	.	ID=gene691;Dbxref=GeneID:4808052;Name=SSA_0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0684
NC_009009.1	RefSeq	CDS	665132	668953	.	+	0	ID=cds650;Parent=gene691;Dbxref=Genbank:YP_001034671.1,GeneID:4808052;Name=YP_001034671.1;Note=GC: 45.4%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.807. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.996)%3B Curator(s): P. Xu;gbkey=CDS;product=fibril-like structure subunit FibA;protein_id=YP_001034671.1;transl_table=11
NC_009009.1	RefSeq	gene	669172	669492	.	+	.	ID=gene692;Dbxref=GeneID:4807227;Name=SSA_0685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0685
NC_009009.1	RefSeq	CDS	669172	669492	.	+	0	ID=cds651;Parent=gene692;Dbxref=Genbank:YP_001034672.1,GeneID:4807227;Name=YP_001034672.1;Note=GC: 38.01%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.759. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034672.1;transl_table=11
NC_009009.1	RefSeq	gene	669696	670139	.	+	.	ID=gene693;Dbxref=GeneID:4807314;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=SSA_0686
NC_009009.1	RefSeq	CDS	669696	670139	.	+	0	ID=cds652;Parent=gene693;Dbxref=Genbank:YP_001034673.1,GeneID:4807314;Name=YP_001034673.1;Note=GC: 47.07%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): P. Xu;gbkey=CDS;gene=fur;product=Fe2+/Zn2+ uptake regulation protein;protein_id=YP_001034673.1;transl_table=11
NC_009009.1	RefSeq	gene	670607	671350	.	+	.	ID=gene694;Dbxref=GeneID:4807345;Name=SSA_0687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0687
NC_009009.1	RefSeq	CDS	670607	671350	.	+	0	ID=cds653;Parent=gene694;Dbxref=Genbank:YP_001034674.1,GeneID:4807345;Name=YP_001034674.1;Note=GC: 39.38%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.745. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034674.1;transl_table=11
NC_009009.1	RefSeq	gene	671500	672192	.	+	.	ID=gene695;Dbxref=GeneID:4806926;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=SSA_0688
NC_009009.1	RefSeq	CDS	671500	672192	.	+	0	ID=cds654;Parent=gene695;Dbxref=Genbank:YP_001034675.1,GeneID:4806926;Name=YP_001034675.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase;protein_id=YP_001034675.1;transl_table=11
NC_009009.1	RefSeq	gene	672402	674468	.	+	.	ID=gene696;Dbxref=GeneID:4807204;Name=pbp2b;gbkey=Gene;gene=pbp2b;gene_biotype=protein_coding;locus_tag=SSA_0689
NC_009009.1	RefSeq	CDS	672402	674468	.	+	0	ID=cds655;Parent=gene696;Dbxref=Genbank:YP_001034676.1,GeneID:4807204;Name=YP_001034676.1;Note=GC: 48.57%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.767. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.995)%3B Curator(s): P. Xu;gbkey=CDS;gene=pbp2b;product=penicillin-binding protein 2B;protein_id=YP_001034676.1;transl_table=11
NC_009009.1	RefSeq	gene	674572	675168	.	+	.	ID=gene697;Dbxref=GeneID:4807182;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SSA_0690
NC_009009.1	RefSeq	CDS	674572	675168	.	+	0	ID=cds656;Parent=gene697;Dbxref=Genbank:YP_001034677.1,GeneID:4807182;Name=YP_001034677.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=YP_001034677.1;transl_table=11
NC_009009.1	RefSeq	gene	675373	676434	.	+	.	ID=gene698;Dbxref=GeneID:4807138;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=SSA_0691
NC_009009.1	RefSeq	CDS	675373	676434	.	+	0	ID=cds657;Parent=gene698;Dbxref=Genbank:YP_001034678.1,GeneID:4807138;Name=YP_001034678.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanyl-alanine synthetase A;protein_id=YP_001034678.1;transl_table=11
NC_009009.1	RefSeq	gene	676510	677880	.	+	.	ID=gene699;Dbxref=GeneID:4807344;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SSA_0692
NC_009009.1	RefSeq	CDS	676510	677880	.	+	0	ID=cds658;Parent=gene699;Dbxref=Genbank:YP_001034679.1,GeneID:4807344;Name=YP_001034679.1;Note=GC: 48.5%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): P. Xu;gbkey=CDS;gene=murF;product=D-Ala-D-Ala adding enzyme;protein_id=YP_001034679.1;transl_table=11
NC_009009.1	RefSeq	gene	677870	678481	.	+	.	ID=gene700;Dbxref=GeneID:4806860;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=SSA_0694
NC_009009.1	RefSeq	CDS	677870	678481	.	+	0	ID=cds659;Parent=gene700;Dbxref=Genbank:YP_001034680.1,GeneID:4806860;Name=YP_001034680.1;Note=GC: 39.87%25%3B Codon Adaptation Index (CAI): 0.809. Curator(s): P. Xu;gbkey=CDS;gene=mutT;product=Mutator protein;protein_id=YP_001034680.1;transl_table=11
NC_009009.1	RefSeq	gene	678589	679275	.	+	.	ID=gene701;Dbxref=GeneID:4807076;Name=SSA_0695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0695
NC_009009.1	RefSeq	CDS	678589	679275	.	+	0	ID=cds660;Parent=gene701;Dbxref=Genbank:YP_001034681.1,GeneID:4807076;Name=YP_001034681.1;Note=GC: 41.63%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.784. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034681.1;transl_table=11
NC_009009.1	RefSeq	gene	679294	679980	.	+	.	ID=gene702;Dbxref=GeneID:4807225;Name=SSA_0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0696
NC_009009.1	RefSeq	CDS	679294	679980	.	+	0	ID=cds661;Parent=gene702;Dbxref=Genbank:YP_001034682.1,GeneID:4807225;Name=YP_001034682.1;Note=GC: 43.09%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.759. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034682.1;transl_table=11
NC_009009.1	RefSeq	gene	680223	680336	.	+	.	ID=gene703;Dbxref=GeneID:4807134;Name=SSA_0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0697
NC_009009.1	RefSeq	CDS	680223	680336	.	+	0	ID=cds662;Parent=gene703;Dbxref=Genbank:YP_001034683.1,GeneID:4807134;Name=YP_001034683.1;Note=GC: 34.21%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.772. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034683.1;transl_table=11
NC_009009.1	RefSeq	gene	680523	682067	.	+	.	ID=gene704;Dbxref=GeneID:4807112;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SSA_0698
NC_009009.1	RefSeq	CDS	680523	682067	.	+	0	ID=cds663;Parent=gene704;Dbxref=Genbank:YP_001034684.1,GeneID:4807112;Name=YP_001034684.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=YP_001034684.1;transl_table=11
NC_009009.1	RefSeq	gene	682356	682604	.	+	.	ID=gene705;Dbxref=GeneID:4807215;Name=SSA_0699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0699
NC_009009.1	RefSeq	CDS	682356	682604	.	+	0	ID=cds664;Parent=gene705;Dbxref=Genbank:YP_001034685.1,GeneID:4807215;Name=YP_001034685.1;Note=GC: 31.73%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): P. Xu;gbkey=CDS;product=methyltransferase;protein_id=YP_001034685.1;transl_table=11
NC_009009.1	RefSeq	gene	682636	683400	.	+	.	ID=gene706;Dbxref=GeneID:4807057;Name=SSA_0700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0700
NC_009009.1	RefSeq	CDS	682636	683400	.	+	0	ID=cds665;Parent=gene706;Dbxref=Genbank:YP_001034686.1,GeneID:4807057;Name=YP_001034686.1;Note=GC: 32.42%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.704. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034686.1;transl_table=11
NC_009009.1	RefSeq	gene	684508	685416	.	+	.	ID=gene707;Dbxref=GeneID:4807164;Name=SSA_0701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0701
NC_009009.1	RefSeq	CDS	684508	685416	.	+	0	ID=cds666;Parent=gene707;Dbxref=Genbank:YP_001034687.1,GeneID:4807164;Name=YP_001034687.1;Note=GC: 42.35%25%3B Transporter classification TC:1.A.35.3.1. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.788. Curator(s): P. Xu;gbkey=CDS;product=cation transporter;protein_id=YP_001034687.1;transl_table=11
NC_009009.1	RefSeq	gene	685628	688291	.	+	.	ID=gene708;Dbxref=GeneID:4807398;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=SSA_0702
NC_009009.1	RefSeq	CDS	685628	688291	.	+	0	ID=cds667;Parent=gene708;Dbxref=Genbank:YP_001034688.1,GeneID:4807398;Name=YP_001034688.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;gene=citB;product=aconitate hydratase;protein_id=YP_001034688.1;transl_table=11
NC_009009.1	RefSeq	gene	688294	689412	.	+	.	ID=gene709;Dbxref=GeneID:4807016;Name=SSA_0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0703
NC_009009.1	RefSeq	CDS	688294	689412	.	+	0	ID=cds668;Parent=gene709;Dbxref=Genbank:YP_001034689.1,GeneID:4807016;Name=YP_001034689.1;Note=catalyzes the formation of citrate from acetyl-CoA and oxaloacetate;gbkey=CDS;product=citrate synthase;protein_id=YP_001034689.1;transl_table=11
NC_009009.1	RefSeq	gene	689414	690610	.	+	.	ID=gene710;Dbxref=GeneID:4807085;Name=SSA_0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0704
NC_009009.1	RefSeq	CDS	689414	690610	.	+	0	ID=cds669;Parent=gene710;Dbxref=Genbank:YP_001034690.1,GeneID:4807085;Name=YP_001034690.1;Note=GC: 47.95%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): P. Xu;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=YP_001034690.1;transl_table=11
NC_009009.1	RefSeq	gene	690642	691040	.	-	.	ID=gene711;Dbxref=GeneID:4807234;Name=SSA_0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0705
NC_009009.1	RefSeq	CDS	690642	691040	.	-	0	ID=cds670;Parent=gene711;Dbxref=Genbank:YP_001034691.1,GeneID:4807234;Name=YP_001034691.1;Note=GC: 45.36%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.749. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034691.1;transl_table=11
NC_009009.1	RefSeq	gene	691503	692969	.	+	.	ID=gene712;Dbxref=GeneID:4807214;Name=rheA;gbkey=Gene;gene=rheA;gene_biotype=protein_coding;locus_tag=SSA_0706
NC_009009.1	RefSeq	CDS	691503	692969	.	+	0	ID=cds671;Parent=gene712;Dbxref=Genbank:YP_001034692.1,GeneID:4807214;Name=YP_001034692.1;Note=GC: 48.53%25%3B Codon Adaptation Index (CAI): 0.824. Curator(s): P. Xu;gbkey=CDS;gene=rheA;product=RNA helicase;protein_id=YP_001034692.1;transl_table=11
NC_009009.1	RefSeq	gene	693355	694101	.	+	.	ID=gene713;Dbxref=GeneID:4806685;Name=SSA_0707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0707
NC_009009.1	RefSeq	CDS	693355	694101	.	+	0	ID=cds672;Parent=gene713;Dbxref=Genbank:YP_001034693.1,GeneID:4806685;Name=YP_001034693.1;Note=GC: 41.9%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;product=lactose phosphotransferase system transcriptional repressor;protein_id=YP_001034693.1;transl_table=11
NC_009009.1	RefSeq	gene	694284	694817	.	+	.	ID=gene714;Dbxref=GeneID:4805797;Name=SSA_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0708
NC_009009.1	RefSeq	CDS	694284	694817	.	+	0	ID=cds673;Parent=gene714;Dbxref=Genbank:YP_001034694.1,GeneID:4805797;Name=YP_001034694.1;Note=GC: 43.26%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.776. SignalP prediction: Yes (prob. 0.502)%3B Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034694.1;transl_table=11
NC_009009.1	RefSeq	gene	694863	695729	.	-	.	ID=gene715;Dbxref=GeneID:4805798;Name=epsH;gbkey=Gene;gene=epsH;gene_biotype=protein_coding;locus_tag=SSA_0710
NC_009009.1	RefSeq	CDS	694863	695729	.	-	0	ID=cds674;Parent=gene715;Dbxref=Genbank:YP_001034695.1,GeneID:4805798;Name=YP_001034695.1;Note=GC: 43.83%25%3B Codon Adaptation Index (CAI): 0.762. Curator(s): P. Xu;gbkey=CDS;gene=epsH;product=exopolysaccharide biosynthesis acetyltransferase;protein_id=YP_001034695.1;transl_table=11
NC_009009.1	RefSeq	gene	695722	695985	.	-	.	ID=gene716;Dbxref=GeneID:4807719;Name=SSA_0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0709
NC_009009.1	RefSeq	CDS	695722	695985	.	-	0	ID=cds675;Parent=gene716;Dbxref=Genbank:YP_001034696.1,GeneID:4807719;Name=YP_001034696.1;Note=GC: 46.59%25%3B Codon Adaptation Index (CAI): 0.76. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034696.1;transl_table=11
NC_009009.1	RefSeq	gene	695975	696721	.	-	.	ID=gene717;Dbxref=GeneID:4807720;Name=SSA_0711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0711
NC_009009.1	RefSeq	CDS	695975	696721	.	-	0	ID=cds676;Parent=gene717;Dbxref=Genbank:YP_001034697.1,GeneID:4807720;Name=YP_001034697.1;Note=GC: 46.72%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): P. Xu;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034697.1;transl_table=11
NC_009009.1	RefSeq	gene	696851	699190	.	-	.	ID=gene718;Dbxref=GeneID:4805915;Name=ctpE;gbkey=Gene;gene=ctpE;gene_biotype=protein_coding;locus_tag=SSA_0712
NC_009009.1	RefSeq	CDS	696851	699190	.	-	0	ID=cds677;Parent=gene718;Dbxref=Genbank:YP_001034698.1,GeneID:4805915;Name=YP_001034698.1;Note=GC: 48.68%25%3B Transporter classification TC:3.A.3.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.758. Curator(s): P. Xu %2C J. Alves;gbkey=CDS;gene=ctpE;product=P-type ATPase-metal cation transport;protein_id=YP_001034698.1;transl_table=11
NC_009009.1	RefSeq	gene	699348	700088	.	+	.	ID=gene719;Dbxref=GeneID:4805916;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=SSA_0713
NC_009009.1	RefSeq	CDS	699348	700088	.	+	0	ID=cds678;Parent=gene719;Dbxref=Genbank:YP_001034699.1,GeneID:4805916;Name=YP_001034699.1;Note=GC: 42.91%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.828. SignalP prediction: Yes (prob. 0.5)%3B Curator(s): P. Xu %2C J. Alves;gbkey=CDS;gene=plsC;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=YP_001034699.1;transl_table=11
NC_009009.1	RefSeq	gene	700182	700709	.	+	.	ID=gene720;Dbxref=GeneID:4807880;Name=SSA_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0714
NC_009009.1	RefSeq	CDS	700182	700709	.	+	0	ID=cds679;Parent=gene720;Dbxref=Genbank:YP_001034700.1,GeneID:4807880;Name=YP_001034700.1;Note=GC: 42.61%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.729. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034700.1;transl_table=11
NC_009009.1	RefSeq	gene	700866	701546	.	+	.	ID=gene721;Dbxref=GeneID:4807881;Name=comEA;gbkey=Gene;gene=comEA;gene_biotype=protein_coding;locus_tag=SSA_0715
NC_009009.1	RefSeq	CDS	700866	701546	.	+	0	ID=cds680;Parent=gene721;Dbxref=Genbank:YP_001034701.1,GeneID:4807881;Name=YP_001034701.1;Note=GC: 46.11%25%3B Transporter classification TC:3.A.11.1.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.536)%3B Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=comEA;product=DNA uptake protein;protein_id=YP_001034701.1;transl_table=11
NC_009009.1	RefSeq	gene	701530	703770	.	+	.	ID=gene722;Dbxref=GeneID:4805858;Name=comEC;gbkey=Gene;gene=comEC;gene_biotype=protein_coding;locus_tag=SSA_0716
NC_009009.1	RefSeq	CDS	701530	703770	.	+	0	ID=cds681;Parent=gene722;Dbxref=Genbank:YP_001034702.1,GeneID:4805858;Name=YP_001034702.1;Note=GC: 43.24%25%3B Transporter classification TC:3.A.11.1.1. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.763. Helix-turn-helix prediction: AraC. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=comEC;product=competence protein;protein_id=YP_001034702.1;transl_table=11
NC_009009.1	RefSeq	gene	703901	704995	.	+	.	ID=gene723;Dbxref=GeneID:4805859;Name=SSA_0718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0718
NC_009009.1	RefSeq	CDS	703901	704995	.	+	0	ID=cds682;Parent=gene723;Dbxref=Genbank:YP_001034703.1,GeneID:4805859;Name=YP_001034703.1;Note=GC: 41.64%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.823. Possibly membrane-associated%2C QG-rich protein. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034703.1;transl_table=11
NC_009009.1	RefSeq	gene	705246	706292	.	+	.	ID=gene724;Dbxref=GeneID:4806124;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SSA_0720
NC_009009.1	RefSeq	CDS	705246	706292	.	+	0	ID=cds683;Parent=gene724;Dbxref=Genbank:YP_001034704.1,GeneID:4806124;Name=YP_001034704.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=YP_001034704.1;transl_table=11
NC_009009.1	RefSeq	gene	706355	706960	.	+	.	ID=gene725;Dbxref=GeneID:4806125;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=SSA_0721
NC_009009.1	RefSeq	CDS	706355	706960	.	+	0	ID=cds684;Parent=gene725;Dbxref=Genbank:YP_001034705.1,GeneID:4806125;Name=YP_001034705.1;Note=GC: 42.57%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=sodA;product=Mn/Fe-dependent superoxide dismutase;protein_id=YP_001034705.1;transl_table=11
NC_009009.1	RefSeq	gene	707015	708175	.	+	.	ID=gene726;Dbxref=GeneID:4806281;Name=SSA_0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0722
NC_009009.1	RefSeq	CDS	707015	708175	.	+	0	ID=cds685;Parent=gene726;Dbxref=Genbank:YP_001034706.1,GeneID:4806281;Name=YP_001034706.1;Note=GC: 42.29%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.777. Curator(s): X. Ge %2C J. Alves%3B possible membrane-associated peptidase;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034706.1;transl_table=11
NC_009009.1	RefSeq	gene	708386	708526	.	+	.	ID=gene727;Dbxref=GeneID:4806282;Name=SSA_0723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0723
NC_009009.1	RefSeq	CDS	708386	708526	.	+	0	ID=cds686;Parent=gene727;Dbxref=Genbank:YP_001034707.1,GeneID:4806282;Name=YP_001034707.1;Note=GC: 37.59%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.701. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.792)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034707.1;transl_table=11
NC_009009.1	RefSeq	gene	708792	710372	.	+	.	ID=gene728;Dbxref=GeneID:4806349;Name=SSA_0724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0724
NC_009009.1	RefSeq	CDS	708792	710372	.	+	0	ID=cds687;Parent=gene728;Dbxref=Genbank:YP_001034708.1,GeneID:4806349;Name=YP_001034708.1;Note=GC: 42.57%25%3B Transporter classification TC:3.A.1.112.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.784. SignalP prediction: Yes (prob. 0.992)%3B Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001034708.1;transl_table=11
NC_009009.1	RefSeq	gene	710387	710872	.	+	.	ID=gene729;Dbxref=GeneID:4806350;Name=SSA_0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0725
NC_009009.1	RefSeq	CDS	710387	710872	.	+	0	ID=cds688;Parent=gene729;Dbxref=Genbank:YP_001034709.1,GeneID:4806350;Name=YP_001034709.1;Note=GC: 42.8%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.721. SignalP prediction: Yes (prob. 0.78)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034709.1;transl_table=11
NC_009009.1	RefSeq	gene	711045	712844	.	+	.	ID=gene730;Dbxref=GeneID:4807567;Name=SSA_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0726
NC_009009.1	RefSeq	CDS	711045	712844	.	+	0	ID=cds689;Parent=gene730;Dbxref=Genbank:YP_001034710.1,GeneID:4807567;Name=YP_001034710.1;Note=GC: 45.17%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.728. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): X. Ge;gbkey=CDS;product=FmtA-like protein;protein_id=YP_001034710.1;transl_table=11
NC_009009.1	RefSeq	gene	712875	713699	.	+	.	ID=gene731;Dbxref=GeneID:4807568;Name=SSA_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0727
NC_009009.1	RefSeq	CDS	712875	713699	.	+	0	ID=cds690;Parent=gene731;Dbxref=Genbank:YP_001034711.1,GeneID:4807568;Name=YP_001034711.1;Note=GC: 45.09%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.759. SignalP prediction: Yes (prob. 0.552)%3B Curator(s): X. Ge;gbkey=CDS;product=metal-dependent membrane protease;protein_id=YP_001034711.1;transl_table=11
NC_009009.1	RefSeq	gene	713828	714583	.	+	.	ID=gene732;Dbxref=GeneID:4807510;Name=SSA_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0728
NC_009009.1	RefSeq	CDS	713828	714583	.	+	0	ID=cds691;Parent=gene732;Dbxref=Genbank:YP_001034712.1,GeneID:4807510;Name=YP_001034712.1;Note=GC: 48.81%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.728. Helix-turn-helix prediction: AraC. Curator(s): X. Ge;gbkey=CDS;product=protease;protein_id=YP_001034712.1;transl_table=11
NC_009009.1	RefSeq	gene	714537	714737	.	+	.	ID=gene733;Dbxref=GeneID:4807511;Name=SSA_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0729
NC_009009.1	RefSeq	CDS	714537	714737	.	+	0	ID=cds692;Parent=gene733;Dbxref=Genbank:YP_001034713.1,GeneID:4807511;Name=YP_001034713.1;Note=GC: 50.25%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.68. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034713.1;transl_table=11
NC_009009.1	RefSeq	gene	714958	715227	.	+	.	ID=gene734;Dbxref=GeneID:4807999;Name=SSA_0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0730
NC_009009.1	RefSeq	CDS	714958	715227	.	+	0	ID=cds693;Parent=gene734;Dbxref=Genbank:YP_001034714.1,GeneID:4807999;Name=YP_001034714.1;Note=GC: 41.85%25%3B Codon Adaptation Index (CAI): 0.705. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=arsenical resistance operon repressor ArsR;protein_id=YP_001034714.1;transl_table=11
NC_009009.1	RefSeq	gene	715205	715714	.	+	.	ID=gene735;Dbxref=GeneID:4808000;Name=SSA_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0731
NC_009009.1	RefSeq	CDS	715205	715714	.	+	0	ID=cds694;Parent=gene735;Dbxref=Genbank:YP_001034715.1,GeneID:4808000;Name=YP_001034715.1;Note=GC: 41.96%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.737. SignalP prediction: Yes (prob. 0.531)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034715.1;transl_table=11
NC_009009.1	RefSeq	gene	715801	715986	.	-	.	ID=gene736;Dbxref=GeneID:4807820;Name=SSA_0732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0732
NC_009009.1	RefSeq	CDS	715801	715986	.	-	0	ID=cds695;Parent=gene736;Dbxref=Genbank:YP_001034716.1,GeneID:4807820;Name=YP_001034716.1;Note=GC: 33.87%25%3B Codon Adaptation Index (CAI): 0.726. Curator(s): X. Ge;gbkey=CDS;product=transposase;protein_id=YP_001034716.1;transl_table=11
NC_009009.1	RefSeq	gene	716209	716997	.	+	.	ID=gene737;Dbxref=GeneID:4807821;Name=SSA_0733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0733
NC_009009.1	RefSeq	CDS	716209	716997	.	+	0	ID=cds696;Parent=gene737;Dbxref=Genbank:YP_001034717.1,GeneID:4807821;Name=YP_001034717.1;Note=GC: 45.25%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.773. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034717.1;transl_table=11
NC_009009.1	RefSeq	gene	717035	717256	.	+	.	ID=gene738;Dbxref=GeneID:4807792;Name=SSA_0734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0734
NC_009009.1	RefSeq	CDS	717035	717256	.	+	0	ID=cds697;Parent=gene738;Dbxref=Genbank:YP_001034718.1,GeneID:4807792;Name=YP_001034718.1;Note=GC: 41.89%25%3B Codon Adaptation Index (CAI): 0.751. Helix-turn-helix prediction: AraC. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=arsenical resistance operon repressor ArsR;protein_id=YP_001034718.1;transl_table=11
NC_009009.1	RefSeq	gene	717243	717740	.	+	.	ID=gene739;Dbxref=GeneID:4807793;Name=SSA_0735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0735
NC_009009.1	RefSeq	CDS	717243	717740	.	+	0	ID=cds698;Parent=gene739;Dbxref=Genbank:YP_001034719.1,GeneID:4807793;Name=YP_001034719.1;Note=GC: 34.54%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.743. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034719.1;transl_table=11
NC_009009.1	RefSeq	gene	717788	718474	.	+	.	ID=gene740;Dbxref=GeneID:4807928;Name=SSA_0736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0736
NC_009009.1	RefSeq	CDS	717788	718474	.	+	0	ID=cds699;Parent=gene740;Dbxref=Genbank:YP_001034720.1,GeneID:4807928;Name=YP_001034720.1;Note=GC: 42.07%25%3B Codon Adaptation Index (CAI): 0.805. Curator(s): X. Ge;gbkey=CDS;product=catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases;protein_id=YP_001034720.1;transl_table=11
NC_009009.1	RefSeq	gene	718764	719993	.	+	.	ID=gene741;Dbxref=GeneID:4807929;Name=sagP;gbkey=Gene;gene=sagP;gene_biotype=protein_coding;locus_tag=SSA_0737
NC_009009.1	RefSeq	CDS	718764	719993	.	+	0	ID=cds700;Parent=gene741;Dbxref=Genbank:YP_001034721.1,GeneID:4807929;Name=YP_001034721.1;Note=catalyzes the degradation of arginine to citruline and ammonia;gbkey=CDS;gene=sagP;product=arginine deiminase;protein_id=YP_001034721.1;transl_table=11
NC_009009.1	RefSeq	gene	720044	721060	.	+	.	ID=gene742;Dbxref=GeneID:4806430;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=SSA_0738
NC_009009.1	RefSeq	CDS	720044	721060	.	+	0	ID=cds701;Parent=gene742;Dbxref=Genbank:YP_001034722.1,GeneID:4806430;Name=YP_001034722.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;gene=arc;product=ornithine carbamoyltransferase;protein_id=YP_001034722.1;transl_table=11
NC_009009.1	RefSeq	gene	721227	722174	.	+	.	ID=gene743;Dbxref=GeneID:4806431;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=SSA_0739
NC_009009.1	RefSeq	CDS	721227	722174	.	+	0	ID=cds702;Parent=gene743;Dbxref=Genbank:YP_001034723.1,GeneID:4806431;Name=YP_001034723.1;Note=catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;gene=arcC;product=carbamate kinase;protein_id=YP_001034723.1;transl_table=11
NC_009009.1	RefSeq	gene	722380	723891	.	+	.	ID=gene744;Dbxref=GeneID:4807911;Name=SSA_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0740
NC_009009.1	RefSeq	CDS	722380	723891	.	+	0	ID=cds703;Parent=gene744;Dbxref=Genbank:YP_001034724.1,GeneID:4807911;Name=YP_001034724.1;Note=GC: 44.71%25%3B Transporter classification TC:9.B.50.1.1. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 1)%3B Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=C4-dicarboxylate anaerobic carrier%2C arginine transporter;protein_id=YP_001034724.1;transl_table=11
NC_009009.1	RefSeq	gene	723913	725250	.	+	.	ID=gene745;Dbxref=GeneID:4807912;Name=arcT;gbkey=Gene;gene=arcT;gene_biotype=protein_coding;locus_tag=SSA_0741
NC_009009.1	RefSeq	CDS	723913	725250	.	+	0	ID=cds704;Parent=gene745;Dbxref=Genbank:YP_001034725.1,GeneID:4807912;Name=YP_001034725.1;Note=GC: 48.8%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=arcT;product=hypothetical protein;protein_id=YP_001034725.1;transl_table=11
NC_009009.1	RefSeq	gene	725379	725849	.	-	.	ID=gene746;Dbxref=GeneID:4805906;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=SSA_0743
NC_009009.1	RefSeq	CDS	725379	725849	.	-	0	ID=cds705;Parent=gene746;Dbxref=Genbank:YP_001034726.1,GeneID:4805906;Name=YP_001034726.1;Note=GC: 45.44%25%3B Codon Adaptation Index (CAI): 0.763. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=argR;product=transcriptional repressor (arginine synthesis);protein_id=YP_001034726.1;transl_table=11
NC_009009.1	RefSeq	gene	725866	726894	.	-	.	ID=gene747;Dbxref=GeneID:4805907;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=SSA_0744
NC_009009.1	RefSeq	CDS	725866	726894	.	-	0	ID=cds706;Parent=gene747;Dbxref=Genbank:YP_001034727.1,GeneID:4805907;Name=YP_001034727.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine--tRNA ribosyltransferase-isomerase;protein_id=YP_001034727.1;transl_table=11
NC_009009.1	RefSeq	gene	726904	727125	.	-	.	ID=gene748;Dbxref=GeneID:4807386;Name=SSA_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0745
NC_009009.1	RefSeq	CDS	726904	727125	.	-	0	ID=cds707;Parent=gene748;Dbxref=Genbank:YP_001034728.1,GeneID:4807386;Name=YP_001034728.1;Note=GC: 39.19%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.744. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034728.1;transl_table=11
NC_009009.1	RefSeq	gene	727218	727925	.	+	.	ID=gene749;Dbxref=GeneID:4807387;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SSA_0746
NC_009009.1	RefSeq	CDS	727218	727925	.	+	0	ID=cds708;Parent=gene749;Dbxref=Genbank:YP_001034729.1,GeneID:4807387;Name=YP_001034729.1;Note=GC: 45.2%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): X. Ge;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=YP_001034729.1;transl_table=11
NC_009009.1	RefSeq	gene	728076	729431	.	+	.	ID=gene750;Dbxref=GeneID:4807832;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=SSA_0747
NC_009009.1	RefSeq	CDS	728076	729431	.	+	0	ID=cds709;Parent=gene750;Dbxref=Genbank:YP_001034730.1,GeneID:4807832;Name=YP_001034730.1;Note=GC: 42.92%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.81. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): X. Ge;gbkey=CDS;gene=dacA;product=DD-carboxypeptidase;protein_id=YP_001034730.1;transl_table=11
NC_009009.1	RefSeq	gene	729526	730695	.	+	.	ID=gene751;Dbxref=GeneID:4807833;Name=SSA_0748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0748
NC_009009.1	RefSeq	CDS	729526	730695	.	+	0	ID=cds710;Parent=gene751;Dbxref=Genbank:YP_001034731.1,GeneID:4807833;Name=YP_001034731.1;Note=GC: 43.33%25%3B Transporter classification TC:2.A.1.5.2. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.743. SignalP prediction: Yes (prob. 0.45)%3B Curator(s): X. Ge;gbkey=CDS;product=major facilitator superfamily sugar transporter;protein_id=YP_001034731.1;transl_table=11
NC_009009.1	RefSeq	gene	730808	731758	.	+	.	ID=gene752;Dbxref=GeneID:4805847;Name=coiA;gbkey=Gene;gene=coiA;gene_biotype=protein_coding;locus_tag=SSA_0749
NC_009009.1	RefSeq	CDS	730808	731758	.	+	0	ID=cds711;Parent=gene752;Dbxref=Genbank:YP_001034732.1,GeneID:4805847;Name=YP_001034732.1;Note=GC: 45.43%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): X. Ge;gbkey=CDS;gene=coiA;product=competence protein;protein_id=YP_001034732.1;transl_table=11
NC_009009.1	RefSeq	gene	731929	732315	.	+	.	ID=gene753;Dbxref=GeneID:4805848;Name=SSA_0750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0750
NC_009009.1	RefSeq	CDS	731929	732315	.	+	0	ID=cds712;Parent=gene753;Dbxref=Genbank:YP_001034733.1,GeneID:4805848;Name=YP_001034733.1;Note=GC: 33.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.734. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034733.1;transl_table=11
NC_009009.1	RefSeq	gene	732507	734309	.	+	.	ID=gene754;Dbxref=GeneID:4806310;Name=SSA_0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0751
NC_009009.1	RefSeq	CDS	732507	734309	.	+	0	ID=cds713;Parent=gene754;Dbxref=Genbank:YP_001034734.1,GeneID:4806310;Name=YP_001034734.1;Note=GC: 44.48%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): X. Ge;gbkey=CDS;product=oligoendopeptidase F;protein_id=YP_001034734.1;transl_table=11
NC_009009.1	RefSeq	gene	734311	734994	.	+	.	ID=gene755;Dbxref=GeneID:4806311;Name=SSA_0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0752
NC_009009.1	RefSeq	CDS	734311	734994	.	+	0	ID=cds714;Parent=gene755;Dbxref=Genbank:YP_001034735.1,GeneID:4806311;Name=YP_001034735.1;Note=GC: 47.95%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034735.1;transl_table=11
NC_009009.1	RefSeq	gene	735108	736115	.	+	.	ID=gene756;Dbxref=GeneID:4807351;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=SSA_0753
NC_009009.1	RefSeq	CDS	735108	736115	.	+	0	ID=cds715;Parent=gene756;Dbxref=Genbank:YP_001034736.1,GeneID:4807351;Name=YP_001034736.1;Note=cis/trans isomerase of peptidylprolyl%3B PPIase%3B membrane-bound lipoprotein;gbkey=CDS;gene=prsA;product=foldase protein PrsA;protein_id=YP_001034736.1;transl_table=11
NC_009009.1	RefSeq	gene	736352	736837	.	+	.	ID=gene757;Dbxref=GeneID:4807352;Name=SSA_0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0755
NC_009009.1	RefSeq	CDS	736352	736837	.	+	0	ID=cds716;Parent=gene757;Dbxref=Genbank:YP_001034737.1,GeneID:4807352;Name=YP_001034737.1;Note=GC: 40.12%25%3B Codon Adaptation Index (CAI): 0.804. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034737.1;transl_table=11
NC_009009.1	RefSeq	gene	736876	739494	.	+	.	ID=gene758;Dbxref=GeneID:4806390;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=SSA_0756
NC_009009.1	RefSeq	CDS	736876	739494	.	+	0	ID=cds717;Parent=gene758;Dbxref=Genbank:YP_001034738.1,GeneID:4806390;Name=YP_001034738.1;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=YP_001034738.1;transl_table=11
NC_009009.1	RefSeq	gene	739736	740758	.	+	.	ID=gene759;Dbxref=GeneID:4806391;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=SSA_0757
NC_009009.1	RefSeq	CDS	739736	740758	.	+	0	ID=cds718;Parent=gene759;Dbxref=Genbank:YP_001034739.1,GeneID:4806391;Name=YP_001034739.1;Note=catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=YP_001034739.1;transl_table=11
NC_009009.1	RefSeq	gene	740776	741969	.	+	.	ID=gene760;Dbxref=GeneID:4806340;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=SSA_0758
NC_009009.1	RefSeq	CDS	740776	741969	.	+	0	ID=cds719;Parent=gene760;Dbxref=Genbank:YP_001034740.1,GeneID:4806340;Name=YP_001034740.1;Note=bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate;gbkey=CDS;gene=argJ;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=YP_001034740.1;transl_table=11
NC_009009.1	RefSeq	gene	741981	742718	.	+	.	ID=gene761;Dbxref=GeneID:4806341;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=SSA_0759
NC_009009.1	RefSeq	CDS	741981	742718	.	+	0	ID=cds720;Parent=gene761;Dbxref=Genbank:YP_001034741.1,GeneID:4806341;Name=YP_001034741.1;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=YP_001034741.1;transl_table=11
NC_009009.1	RefSeq	gene	742721	743863	.	+	.	ID=gene762;Dbxref=GeneID:4806527;Name=SSA_0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0760
NC_009009.1	RefSeq	CDS	742721	743863	.	+	0	ID=cds721;Parent=gene762;Dbxref=Genbank:YP_001034742.1,GeneID:4806527;Name=YP_001034742.1;Note=GC: 47.94%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): X. Ge;gbkey=CDS;product=acetylornithine aminotransferase;protein_id=YP_001034742.1;transl_table=11
NC_009009.1	RefSeq	gene	744017	744229	.	+	.	ID=gene763;Dbxref=GeneID:4806528;Name=SSA_0761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0761
NC_009009.1	RefSeq	CDS	744017	744229	.	+	0	ID=cds722;Parent=gene763;Dbxref=Genbank:YP_001034743.1,GeneID:4806528;Name=YP_001034743.1;Note=GC: 48.36%25%3B Codon Adaptation Index (CAI): 0.695. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034743.1;transl_table=11
NC_009009.1	RefSeq	gene	744327	745091	.	+	.	ID=gene764;Dbxref=GeneID:4805783;Name=SSA_0762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0762
NC_009009.1	RefSeq	CDS	744327	745091	.	+	0	ID=cds723;Parent=gene764;Dbxref=Genbank:YP_001034744.1,GeneID:4805783;Name=YP_001034744.1;Note=GC: 36.34%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.754. SignalP prediction: Yes (prob. 0.813)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034744.1;transl_table=11
NC_009009.1	RefSeq	gene	745120	745662	.	+	.	ID=gene765;Dbxref=GeneID:4805784;Name=SSA_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0763
NC_009009.1	RefSeq	CDS	745120	745662	.	+	0	ID=cds724;Parent=gene765;Dbxref=Genbank:YP_001034745.1,GeneID:4805784;Name=YP_001034745.1;Note=GC: 42.54%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.779. Similar to negative regulator of Streptococcus sobrinus surface protein antigen gene. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=transcription repressor;protein_id=YP_001034745.1;transl_table=11
NC_009009.1	RefSeq	gene	745659	746360	.	+	.	ID=gene766;Dbxref=GeneID:4806836;Name=SSA_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0765
NC_009009.1	RefSeq	CDS	745659	746360	.	+	0	ID=cds725;Parent=gene766;Dbxref=Genbank:YP_001034746.1,GeneID:4806836;Name=YP_001034746.1;Note=GC: 39.89%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.74. SignalP prediction: Yes (prob. 0.566)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034746.1;transl_table=11
NC_009009.1	RefSeq	gene	746382	747035	.	+	.	ID=gene767;Dbxref=GeneID:4806837;Name=SSA_0766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0766
NC_009009.1	RefSeq	CDS	746382	747035	.	+	0	ID=cds726;Parent=gene767;Dbxref=Genbank:YP_001034747.1,GeneID:4806837;Name=YP_001034747.1;Note=GC: 39.45%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.775. SignalP prediction: Yes (prob. 0.469)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034747.1;transl_table=11
NC_009009.1	RefSeq	gene	747227	748114	.	+	.	ID=gene768;Dbxref=GeneID:4808059;Name=SSA_0767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0767
NC_009009.1	RefSeq	CDS	747227	748114	.	+	0	ID=cds727;Parent=gene768;Dbxref=Genbank:YP_001034748.1,GeneID:4808059;Name=YP_001034748.1;Note=GC: 44.03%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): X. Ge;gbkey=CDS;product=diacylglycerol kinase catalytic subunit;protein_id=YP_001034748.1;transl_table=11
NC_009009.1	RefSeq	gene	748226	749185	.	-	.	ID=gene769;Dbxref=GeneID:4808060;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=SSA_0768
NC_009009.1	RefSeq	CDS	748226	749185	.	-	0	ID=cds728;Parent=gene769;Dbxref=Genbank:YP_001034749.1,GeneID:4808060;Name=YP_001034749.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;gene=nrdF;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_001034749.1;transl_table=11
NC_009009.1	RefSeq	gene	749196	749306	.	-	.	ID=gene770;Dbxref=GeneID:4806542;Name=SSA_0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0769
NC_009009.1	RefSeq	CDS	749196	749306	.	-	0	ID=cds729;Parent=gene770;Dbxref=Genbank:YP_001034750.1,GeneID:4806542;Name=YP_001034750.1;Note=GC: 42.34%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034750.1;transl_table=11
NC_009009.1	RefSeq	gene	749342	751501	.	-	.	ID=gene771;Dbxref=GeneID:4806543;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=SSA_0770
NC_009009.1	RefSeq	CDS	749342	751501	.	-	0	ID=cds730;Parent=gene771;Dbxref=Genbank:YP_001034751.1,GeneID:4806543;Name=YP_001034751.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;gene=nrdE;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_001034751.1;transl_table=11
NC_009009.1	RefSeq	gene	751662	751880	.	-	.	ID=gene772;Dbxref=GeneID:4807369;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=SSA_0771
NC_009009.1	RefSeq	CDS	751662	751880	.	-	0	ID=cds731;Parent=gene772;Dbxref=Genbank:YP_001034752.1,GeneID:4807369;Name=YP_001034752.1;Note=GC: 39.27%25%3B Codon Adaptation Index (CAI): 0.804. Involved in electron transport system for ribonucleotide reductase system NrdEF. Curator(s): X. Ge;gbkey=CDS;gene=nrdH;product=glutaredoxin-like protein;protein_id=YP_001034752.1;transl_table=11
NC_009009.1	RefSeq	gene	752478	752741	.	+	.	ID=gene773;Dbxref=GeneID:4806875;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=SSA_0772
NC_009009.1	RefSeq	CDS	752478	752741	.	+	0	ID=cds732;Parent=gene773;Dbxref=Genbank:YP_001034753.1,GeneID:4806875;Name=YP_001034753.1;Note=GC: 41.67%25%3B Transporter classification TC:8.A.8.1.1. Codon Adaptation Index (CAI): 0.817. Curator(s): X. Ge;gbkey=CDS;gene=ptsH;product=phosphocarrier protein HPr;protein_id=YP_001034753.1;transl_table=11
NC_009009.1	RefSeq	gene	752743	754476	.	+	.	ID=gene774;Dbxref=GeneID:4807520;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=SSA_0773
NC_009009.1	RefSeq	CDS	752743	754476	.	+	0	ID=cds733;Parent=gene774;Dbxref=Genbank:YP_001034754.1,GeneID:4807520;Name=YP_001034754.1;Note=GC: 45.5%25%3B Transporter classification TC:8.A.7.1.1. Codon Adaptation Index (CAI): 0.785. Curator(s): X. Ge;gbkey=CDS;gene=ptsI;product=PTS enzyme I;protein_id=YP_001034754.1;transl_table=11
NC_009009.1	RefSeq	gene	754711	756135	.	+	.	ID=gene775;Dbxref=GeneID:4807521;Name=gapN;gbkey=Gene;gene=gapN;gene_biotype=protein_coding;locus_tag=SSA_0774
NC_009009.1	RefSeq	CDS	754711	756135	.	+	0	ID=cds734;Parent=gene775;Dbxref=Genbank:YP_001034755.1,GeneID:4807521;Name=YP_001034755.1;Note=GC: 46.39%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): X. Ge;gbkey=CDS;gene=gapN;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_001034755.1;transl_table=11
NC_009009.1	RefSeq	gene	756521	758431	.	+	.	ID=gene776;Dbxref=GeneID:4806640;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=SSA_0775
NC_009009.1	RefSeq	CDS	756521	758431	.	+	0	ID=cds735;Parent=gene776;Dbxref=Genbank:YP_001034756.1,GeneID:4806640;Name=YP_001034756.1;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;gbkey=CDS;gene=glgB;product=glycogen branching protein;protein_id=YP_001034756.1;transl_table=11
NC_009009.1	RefSeq	gene	758438	759580	.	+	.	ID=gene777;Dbxref=GeneID:4806641;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=SSA_0776
NC_009009.1	RefSeq	CDS	758438	759580	.	+	0	ID=cds736;Parent=gene777;Dbxref=Genbank:YP_001034757.1,GeneID:4806641;Name=YP_001034757.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_001034757.1;transl_table=11
NC_009009.1	RefSeq	gene	759570	760709	.	+	.	ID=gene778;Dbxref=GeneID:4806428;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=SSA_0777
NC_009009.1	RefSeq	CDS	759570	760709	.	+	0	ID=cds737;Parent=gene778;Dbxref=Genbank:YP_001034758.1,GeneID:4806428;Name=YP_001034758.1;Note=GC: 42.89%25%3B Codon Adaptation Index (CAI): 0.775. Curator(s): X. Ge;gbkey=CDS;gene=glgD;product=glycogen biosynthesis protein GlgD;protein_id=YP_001034758.1;transl_table=11
NC_009009.1	RefSeq	gene	760706	762136	.	+	.	ID=gene779;Dbxref=GeneID:4806429;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=SSA_0778
NC_009009.1	RefSeq	CDS	760706	762136	.	+	0	ID=cds738;Parent=gene779;Dbxref=Genbank:YP_001034759.1,GeneID:4806429;Name=YP_001034759.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=YP_001034759.1;transl_table=11
NC_009009.1	RefSeq	gene	762349	764745	.	+	.	ID=gene780;Dbxref=GeneID:4808063;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=SSA_0779
NC_009009.1	RefSeq	CDS	762349	764745	.	+	0	ID=cds739;Parent=gene780;Dbxref=Genbank:YP_001034760.1,GeneID:4808063;Name=YP_001034760.1;Note=GC: 46.6%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): X. Ge;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=YP_001034760.1;transl_table=11
NC_009009.1	RefSeq	gene	764888	765388	.	+	.	ID=gene781;Dbxref=GeneID:4808064;Name=SSA_0780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0780
NC_009009.1	RefSeq	CDS	764888	765388	.	+	0	ID=cds740;Parent=gene781;Dbxref=Genbank:YP_001034761.1,GeneID:4808064;Name=YP_001034761.1;Note=GC: 48.3%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.731. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=acid phosphatase;protein_id=YP_001034761.1;transl_table=11
NC_009009.1	RefSeq	gene	765513	766454	.	+	.	ID=gene782;Dbxref=GeneID:4806585;Name=pmi;gbkey=Gene;gene=pmi;gene_biotype=protein_coding;locus_tag=SSA_0781
NC_009009.1	RefSeq	CDS	765513	766454	.	+	0	ID=cds741;Parent=gene782;Dbxref=Genbank:YP_001034762.1,GeneID:4806585;Name=YP_001034762.1;Note=GC: 48.09%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): X. Ge;gbkey=CDS;gene=pmi;product=mannose-6-phosphate isomerase;protein_id=YP_001034762.1;transl_table=11
NC_009009.1	RefSeq	gene	766719	766919	.	+	.	ID=gene783;Dbxref=GeneID:4806586;Name=uncE;gbkey=Gene;gene=uncE;gene_biotype=protein_coding;locus_tag=SSA_0782
NC_009009.1	RefSeq	CDS	766719	766919	.	+	0	ID=cds742;Parent=gene783;Dbxref=Genbank:YP_001034763.1,GeneID:4806586;Name=YP_001034763.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B subunit C is part of the membrane proton channel F0;gbkey=CDS;gene=uncE;product=ATP synthase F0F1 subunit C;protein_id=YP_001034763.1;transl_table=11
NC_009009.1	RefSeq	gene	766955	767671	.	+	.	ID=gene784;Dbxref=GeneID:4805768;Name=uncB;gbkey=Gene;gene=uncB;gene_biotype=protein_coding;locus_tag=SSA_0783
NC_009009.1	RefSeq	CDS	766955	767671	.	+	0	ID=cds743;Parent=gene784;Dbxref=Genbank:YP_001034764.1,GeneID:4805768;Name=YP_001034764.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;gene=uncB;product=ATP synthase F0F1 subunit A;protein_id=YP_001034764.1;transl_table=11
NC_009009.1	RefSeq	gene	767690	768184	.	+	.	ID=gene785;Dbxref=GeneID:4805769;Name=uncF;gbkey=Gene;gene=uncF;gene_biotype=protein_coding;locus_tag=SSA_0784
NC_009009.1	RefSeq	CDS	767690	768184	.	+	0	ID=cds744;Parent=gene785;Dbxref=Genbank:YP_001034765.1,GeneID:4805769;Name=YP_001034765.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;gene=uncF;product=ATP synthase F0F1 subunit B;protein_id=YP_001034765.1;transl_table=11
NC_009009.1	RefSeq	gene	768184	768720	.	+	.	ID=gene786;Dbxref=GeneID:4806372;Name=uncH;gbkey=Gene;gene=uncH;gene_biotype=protein_coding;locus_tag=SSA_0785
NC_009009.1	RefSeq	CDS	768184	768720	.	+	0	ID=cds745;Parent=gene786;Dbxref=Genbank:YP_001034766.1,GeneID:4806372;Name=YP_001034766.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=uncH;product=ATP synthase F0F1 subunit delta;protein_id=YP_001034766.1;transl_table=11
NC_009009.1	RefSeq	gene	768877	770241	.	+	.	ID=gene787;Dbxref=GeneID:4806373;Name=uncA;gbkey=Gene;gene=uncA;gene_biotype=protein_coding;locus_tag=SSA_0786
NC_009009.1	RefSeq	CDS	768877	770241	.	+	0	ID=cds746;Parent=gene787;Dbxref=Genbank:YP_001034767.1,GeneID:4806373;Name=YP_001034767.1;Note=GC: 48.94%25%3B Transporter classification TC:3.A.2.1.2. Codon Adaptation Index (CAI): 0.786. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=uncA;product=proton-translocating ATPase%2C F1 sector subunit alpha;protein_id=YP_001034767.1;transl_table=11
NC_009009.1	RefSeq	gene	770257	771138	.	+	.	ID=gene788;Dbxref=GeneID:4806169;Name=uncG;gbkey=Gene;gene=uncG;gene_biotype=protein_coding;locus_tag=SSA_0787
NC_009009.1	RefSeq	CDS	770257	771138	.	+	0	ID=cds747;Parent=gene788;Dbxref=Genbank:YP_001034768.1,GeneID:4806169;Name=YP_001034768.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;gene=uncG;product=ATP synthase F0F1 subunit gamma;protein_id=YP_001034768.1;transl_table=11
NC_009009.1	RefSeq	gene	771177	772583	.	+	.	ID=gene789;Dbxref=GeneID:4806170;Name=uncD;gbkey=Gene;gene=uncD;gene_biotype=protein_coding;locus_tag=SSA_0788
NC_009009.1	RefSeq	CDS	771177	772583	.	+	0	ID=cds748;Parent=gene789;Dbxref=Genbank:YP_001034769.1,GeneID:4806170;Name=YP_001034769.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;gbkey=CDS;gene=uncD;product=ATP synthase F0F1 subunit beta;protein_id=YP_001034769.1;transl_table=11
NC_009009.1	RefSeq	gene	772591	773013	.	+	.	ID=gene790;Dbxref=GeneID:4807678;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=SSA_0789
NC_009009.1	RefSeq	CDS	772591	773013	.	+	0	ID=cds749;Parent=gene790;Dbxref=Genbank:YP_001034770.1,GeneID:4807678;Name=YP_001034770.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase F0F1 subunit epsilon;protein_id=YP_001034770.1;transl_table=11
NC_009009.1	RefSeq	gene	773187	773417	.	+	.	ID=gene791;Dbxref=GeneID:4807679;Name=SSA_0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0790
NC_009009.1	RefSeq	CDS	773187	773417	.	+	0	ID=cds750;Parent=gene791;Dbxref=Genbank:YP_001034771.1,GeneID:4807679;Name=YP_001034771.1;Note=GC: 35.93%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.789. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034771.1;transl_table=11
NC_009009.1	RefSeq	gene	773485	774765	.	+	.	ID=gene792;Dbxref=GeneID:4806273;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=SSA_0791
NC_009009.1	RefSeq	CDS	773485	774765	.	+	0	ID=cds751;Parent=gene792;Dbxref=Genbank:YP_001034772.1,GeneID:4806273;Name=YP_001034772.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_001034772.1;transl_table=11
NC_009009.1	RefSeq	gene	774758	774940	.	+	.	ID=gene793;Dbxref=GeneID:4806274;Name=SSA_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0792
NC_009009.1	RefSeq	CDS	774758	774940	.	+	0	ID=cds752;Parent=gene793;Dbxref=Genbank:YP_001034773.1,GeneID:4806274;Name=YP_001034773.1;Note=GC: 38.8%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.76)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034773.1;transl_table=11
NC_009009.1	RefSeq	gene	774999	775859	.	+	.	ID=gene794;Dbxref=GeneID:4806714;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=SSA_0793
NC_009009.1	RefSeq	CDS	774999	775859	.	+	0	ID=cds753;Parent=gene794;Dbxref=Genbank:YP_001034774.1,GeneID:4806714;Name=YP_001034774.1;Note=GC: 49.94%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.757. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.969)%3B Curator(s): X. Ge;gbkey=CDS;gene=endA;product=DNA-entry nuclease;protein_id=YP_001034774.1;transl_table=11
NC_009009.1	RefSeq	gene	776036	776755	.	+	.	ID=gene795;Dbxref=GeneID:4806715;Name=SSA_0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0794
NC_009009.1	RefSeq	CDS	776036	776755	.	+	0	ID=cds754;Parent=gene795;Dbxref=Genbank:YP_001034775.1,GeneID:4806715;Name=YP_001034775.1;Note=GC: 47.22%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.753. SignalP prediction: Yes (prob. 0.542)%3B Curator(s): X. Ge;gbkey=CDS;product=Zn-dependent protease;protein_id=YP_001034775.1;transl_table=11
NC_009009.1	RefSeq	gene	776760	777125	.	+	.	ID=gene796;Dbxref=GeneID:4806710;Name=SSA_0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0795
NC_009009.1	RefSeq	CDS	776760	777125	.	+	0	ID=cds755;Parent=gene796;Dbxref=Genbank:YP_001034776.1,GeneID:4806710;Name=YP_001034776.1;Note=GC: 39.34%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.787. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034776.1;transl_table=11
NC_009009.1	RefSeq	gene	777225	779120	.	+	.	ID=gene797;Dbxref=GeneID:4806711;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=SSA_0796
NC_009009.1	RefSeq	CDS	777225	779120	.	+	0	ID=cds756;Parent=gene797;Dbxref=Genbank:YP_001034777.1,GeneID:4806711;Name=YP_001034777.1;Note=GC: 50.74%25%3B Transporter classification TC:3.A.1.120.1. Codon Adaptation Index (CAI): 0.763. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;gene=uup;product=ABC transporter ATPase;protein_id=YP_001034777.1;transl_table=11
NC_009009.1	RefSeq	gene	779661	780524	.	+	.	ID=gene798;Dbxref=GeneID:4806793;Name=SSA_0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0797
NC_009009.1	RefSeq	CDS	779661	780524	.	+	0	ID=cds757;Parent=gene798;Dbxref=Genbank:YP_001034778.1,GeneID:4806793;Name=YP_001034778.1;Note=GC: 42.59%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=transcriptional regulator;protein_id=YP_001034778.1;transl_table=11
NC_009009.1	RefSeq	gene	780603	781784	.	+	.	ID=gene799;Dbxref=GeneID:4806794;Name=SSA_0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0798
NC_009009.1	RefSeq	CDS	780603	781784	.	+	0	ID=cds758;Parent=gene799;Dbxref=Genbank:YP_001034779.1,GeneID:4806794;Name=YP_001034779.1;Note=GC: 42.47%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.763. Curator(s): X. Ge;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001034779.1;transl_table=11
NC_009009.1	RefSeq	gene	781803	782060	.	-	.	ID=gene800;Dbxref=GeneID:4806157;Name=SSA_0799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0799
NC_009009.1	RefSeq	CDS	781803	782060	.	-	0	ID=cds759;Parent=gene800;Dbxref=Genbank:YP_001034780.1,GeneID:4806157;Name=YP_001034780.1;Note=GC: 34.11%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.742. SignalP prediction: Yes (prob. 0.762)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034780.1;transl_table=11
NC_009009.1	RefSeq	gene	782079	782864	.	-	.	ID=gene801;Dbxref=GeneID:4806158;Name=cobQ;gbkey=Gene;gene=cobQ;gene_biotype=protein_coding;locus_tag=SSA_0800
NC_009009.1	RefSeq	CDS	782079	782864	.	-	0	ID=cds760;Parent=gene801;Dbxref=Genbank:YP_001034781.1,GeneID:4806158;Name=YP_001034781.1;Note=GC: 45.04%25%3B Codon Adaptation Index (CAI): 0.762. Curator(s): X. Ge;gbkey=CDS;gene=cobQ;product=glutamine amidotransferase;protein_id=YP_001034781.1;transl_table=11
NC_009009.1	RefSeq	gene	782864	784207	.	-	.	ID=gene802;Dbxref=GeneID:4806416;Name=SSA_0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0801
NC_009009.1	RefSeq	CDS	782864	784207	.	-	0	ID=cds761;Parent=gene802;Dbxref=Genbank:YP_001034782.1,GeneID:4806416;Name=YP_001034782.1;Note=GC: 47.02%25%3B Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. Helix-turn-helix prediction: AraC. Curator(s): X. Ge;gbkey=CDS;product=Mur ligase family protein;protein_id=YP_001034782.1;transl_table=11
NC_009009.1	RefSeq	gene	784440	785288	.	+	.	ID=gene803;Dbxref=GeneID:4806417;Name=SSA_0802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0802
NC_009009.1	RefSeq	CDS	784440	785288	.	+	0	ID=cds762;Parent=gene803;Dbxref=Genbank:YP_001034783.1,GeneID:4806417;Name=YP_001034783.1;Note=GC: 44.99%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.75. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034783.1;transl_table=11
NC_009009.1	RefSeq	gene	785285	786040	.	+	.	ID=gene804;Dbxref=GeneID:4806668;Name=SSA_0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0803
NC_009009.1	RefSeq	CDS	785285	786040	.	+	0	ID=cds763;Parent=gene804;Dbxref=Genbank:YP_001034784.1,GeneID:4806668;Name=YP_001034784.1;Note=GC: 45.5%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034784.1;transl_table=11
NC_009009.1	RefSeq	gene	786135	787487	.	+	.	ID=gene805;Dbxref=GeneID:4806669;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=SSA_0804
NC_009009.1	RefSeq	CDS	786135	787487	.	+	0	ID=cds764;Parent=gene805;Dbxref=Genbank:YP_001034785.1,GeneID:4806669;Name=YP_001034785.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=YP_001034785.1;transl_table=11
NC_009009.1	RefSeq	gene	787616	789292	.	+	.	ID=gene806;Dbxref=GeneID:4806264;Name=SSA_0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0805
NC_009009.1	RefSeq	CDS	787616	789292	.	+	0	ID=cds765;Parent=gene806;Dbxref=Genbank:YP_001034786.1,GeneID:4806264;Name=YP_001034786.1;Note=GC: 41.74%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.794. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): X. Ge;gbkey=CDS;product=collagen-binding surface protein;protein_id=YP_001034786.1;transl_table=11
NC_009009.1	RefSeq	gene	789410	789538	.	+	.	ID=gene807;Dbxref=GeneID:4806265;Name=SSA_0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0806
NC_009009.1	RefSeq	CDS	789410	789538	.	+	0	ID=cds766;Parent=gene807;Dbxref=Genbank:YP_001034787.1,GeneID:4806265;Name=YP_001034787.1;Note=GC: 41.86%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.797. SignalP prediction: Yes (prob. 0.956)%3B Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034787.1;transl_table=11
NC_009009.1	RefSeq	gene	789589	790899	.	+	.	ID=gene808;Dbxref=GeneID:4806091;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=SSA_0807
NC_009009.1	RefSeq	CDS	789589	790899	.	+	0	ID=cds767;Parent=gene808;Dbxref=Genbank:YP_001034788.1,GeneID:4806091;Name=YP_001034788.1;Note=essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase ObgE;protein_id=YP_001034788.1;transl_table=11
NC_009009.1	RefSeq	gene	790911	791072	.	+	.	ID=gene809;Dbxref=GeneID:4806092;Name=SSA_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0808
NC_009009.1	RefSeq	CDS	790911	791072	.	+	0	ID=cds768;Parent=gene809;Dbxref=Genbank:YP_001034789.1,GeneID:4806092;Name=YP_001034789.1;Note=GC: 42.59%25%3B Codon Adaptation Index (CAI): 0.748. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034789.1;transl_table=11
NC_009009.1	RefSeq	gene	791286	791666	.	+	.	ID=gene810;Dbxref=GeneID:4805856;Name=SSA_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0809
NC_009009.1	RefSeq	CDS	791286	791666	.	+	0	ID=cds769;Parent=gene810;Dbxref=Genbank:YP_001034790.1,GeneID:4805856;Name=YP_001034790.1;Note=GC: 44.36%25%3B Codon Adaptation Index (CAI): 0.797. Highly conserved%2C active on single-stranded mRNA. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034790.1;transl_table=11
NC_009009.1	RefSeq	gene	791722	792612	.	+	.	ID=gene811;Dbxref=GeneID:4805857;Name=SSA_0810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0810
NC_009009.1	RefSeq	CDS	791722	792612	.	+	0	ID=cds770;Parent=gene811;Dbxref=Genbank:YP_001034791.1,GeneID:4805857;Name=YP_001034791.1;Note=GC: 46.91%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034791.1;transl_table=11
NC_009009.1	RefSeq	gene	792609	793586	.	+	.	ID=gene812;Dbxref=GeneID:4805793;Name=SSA_0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0811
NC_009009.1	RefSeq	CDS	792609	793586	.	+	0	ID=cds771;Parent=gene812;Dbxref=Genbank:YP_001034792.1,GeneID:4805793;Name=YP_001034792.1;Note=GC: 46.93%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034792.1;transl_table=11
NC_009009.1	RefSeq	gene	793583	794494	.	+	.	ID=gene813;Dbxref=GeneID:4805794;Name=SSA_0812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0812
NC_009009.1	RefSeq	CDS	793583	794494	.	+	0	ID=cds772;Parent=gene813;Dbxref=Genbank:YP_001034793.1,GeneID:4805794;Name=YP_001034793.1;Note=GC: 47.92%25%3B Codon Adaptation Index (CAI): 0.778. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034793.1;transl_table=11
NC_009009.1	RefSeq	gene	794528	795496	.	-	.	ID=gene814;Dbxref=GeneID:4806002;Name=SSA_0813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0813
NC_009009.1	RefSeq	CDS	794528	795496	.	-	0	ID=cds773;Parent=gene814;Dbxref=Genbank:YP_001034794.1,GeneID:4806002;Name=YP_001034794.1;Note=GC: 47.57%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): X. Ge;gbkey=CDS;product=thioredoxin reductase;protein_id=YP_001034794.1;transl_table=11
NC_009009.1	RefSeq	gene	795609	796925	.	-	.	ID=gene815;Dbxref=GeneID:4806003;Name=SSA_0814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0814
NC_009009.1	RefSeq	CDS	795609	796925	.	-	0	ID=cds774;Parent=gene815;Dbxref=Genbank:YP_001034795.1,GeneID:4806003;Name=YP_001034795.1;Note=Involved in disulfide oxidoreductase activity and electron transport;gbkey=CDS;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=YP_001034795.1;transl_table=11
NC_009009.1	RefSeq	gene	797115	797471	.	+	.	ID=gene816;Dbxref=GeneID:4805816;Name=SSA_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0815
NC_009009.1	RefSeq	CDS	797115	797471	.	+	0	ID=cds775;Parent=gene816;Dbxref=Genbank:YP_001034796.1,GeneID:4805816;Name=YP_001034796.1;Note=GC: 45.94%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.724. Curator(s): X. Ge;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034796.1;transl_table=11
NC_009009.1	RefSeq	gene	797585	797962	.	+	.	ID=gene817;Dbxref=GeneID:4805817;Name=SSA_0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0816
NC_009009.1	RefSeq	CDS	797585	797962	.	+	0	ID=cds776;Parent=gene817;Dbxref=Genbank:YP_001034797.1,GeneID:4805817;Name=YP_001034797.1;Note=GC: 45.24%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=copper transport operon or penicillinase transcription repressor;protein_id=YP_001034797.1;transl_table=11
NC_009009.1	RefSeq	gene	797978	799435	.	+	.	ID=gene818;Dbxref=GeneID:4807583;Name=SSA_0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0817
NC_009009.1	RefSeq	CDS	797978	799435	.	+	0	ID=cds777;Parent=gene818;Dbxref=Genbank:YP_001034798.1,GeneID:4807583;Name=YP_001034798.1;Note=GC: 45.54%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.774. SignalP prediction: Yes (prob. 0.801)%3B Curator(s): X. Ge %2C J. Alves;gbkey=CDS;product=antirepressor regulating drug resistance;protein_id=YP_001034798.1;transl_table=11
NC_009009.1	RefSeq	gene	799815	800546	.	+	.	ID=gene819;Dbxref=GeneID:4807584;Name=SSA_0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0818
NC_009009.1	RefSeq	CDS	799815	800546	.	+	0	ID=cds778;Parent=gene819;Dbxref=Genbank:YP_001034799.1,GeneID:4807584;Name=YP_001034799.1;Note=GC: 43.31%25%3B Codon Adaptation Index (CAI): 0.77. Possibly involved in polyphosphate accumulation. Curator(s): X. Ge;gbkey=CDS;product=SPX domain-containing protein;protein_id=YP_001034799.1;transl_table=11
NC_009009.1	RefSeq	gene	800558	801241	.	+	.	ID=gene820;Dbxref=GeneID:4806578;Name=SSA_0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0819
NC_009009.1	RefSeq	CDS	800558	801241	.	+	0	ID=cds779;Parent=gene820;Dbxref=Genbank:YP_001034800.1,GeneID:4806578;Name=YP_001034800.1;Note=GC: 43.13%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.76. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034800.1;transl_table=11
NC_009009.1	RefSeq	gene	801389	801565	.	+	.	ID=gene821;Dbxref=GeneID:4806579;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SSA_0820
NC_009009.1	RefSeq	CDS	801389	801565	.	+	0	ID=cds780;Parent=gene821;Dbxref=Genbank:YP_001034801.1,GeneID:4806579;Name=YP_001034801.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=YP_001034801.1;transl_table=11
NC_009009.1	RefSeq	gene	801679	802062	.	-	.	ID=gene822;Dbxref=GeneID:4806107;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=SSA_0822
NC_009009.1	RefSeq	CDS	801679	802062	.	-	0	ID=cds781;Parent=gene822;Dbxref=Genbank:YP_001034802.1,GeneID:4806107;Name=YP_001034802.1;Note=GC: 42.19%25%3B Transporter classification TC:1.A.22.1.3. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.763. Curator(s): L. Ozaki;gbkey=CDS;gene=mscL;product=large conductance mechano-sensitive ion channel;protein_id=YP_001034802.1;transl_table=11
NC_009009.1	RefSeq	gene	802193	804001	.	+	.	ID=gene823;Dbxref=GeneID:4806108;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SSA_0824
NC_009009.1	RefSeq	CDS	802193	804001	.	+	0	ID=cds782;Parent=gene823;Dbxref=Genbank:YP_001034803.1,GeneID:4806108;Name=YP_001034803.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=YP_001034803.1;transl_table=11
NC_009009.1	RefSeq	gene	804004	805116	.	+	.	ID=gene824;Dbxref=GeneID:4806292;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=SSA_0825
NC_009009.1	RefSeq	CDS	804004	805116	.	+	0	ID=cds783;Parent=gene824;Dbxref=Genbank:YP_001034804.1,GeneID:4806292;Name=YP_001034804.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B primary sigma factor of bacterium;gbkey=CDS;gene=rpoD;product=RNA polymerase sigma factor RpoD;protein_id=YP_001034804.1;transl_table=11
NC_009009.1	RefSeq	gene	805238	805576	.	+	.	ID=gene825;Dbxref=GeneID:4806293;Name=SSA_0826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0826
NC_009009.1	RefSeq	CDS	805238	805576	.	+	0	ID=cds784;Parent=gene825;Dbxref=Genbank:YP_001034805.1,GeneID:4806293;Name=YP_001034805.1;Note=GC: 45.72%25%3B Codon Adaptation Index (CAI): 0.822. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034805.1;transl_table=11
NC_009009.1	RefSeq	gene	806173	807012	.	+	.	ID=gene826;Dbxref=GeneID:4806408;Name=SSA_0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0827
NC_009009.1	RefSeq	CDS	806173	807012	.	+	0	ID=cds785;Parent=gene826;Dbxref=Genbank:YP_001034806.1,GeneID:4806408;Name=YP_001034806.1;Note=GC: 45.24%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034806.1;transl_table=11
NC_009009.1	RefSeq	gene	807051	807141	.	+	.	ID=gene827;Dbxref=GeneID:4806409;Name=SSA_2445;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2445
NC_009009.1	RefSeq	tRNA	807051	807141	.	+	.	ID=rna41;Parent=gene827;Dbxref=GeneID:4806409;Note=tRNA-Ser_4;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	exon	807051	807141	.	+	.	ID=id42;Parent=rna41;Dbxref=GeneID:4806409;Note=tRNA-Ser_4;gbkey=tRNA;product=tRNA-Ser
NC_009009.1	RefSeq	gene	807348	812225	.	+	.	ID=gene828;Dbxref=GeneID:4806103;Name=srpA;gbkey=Gene;gene=srpA;gene_biotype=protein_coding;locus_tag=SSA_0829
NC_009009.1	RefSeq	CDS	807348	812225	.	+	0	ID=cds786;Parent=gene828;Dbxref=Genbank:YP_001034807.1,GeneID:4806103;Name=YP_001034807.1;Note=GC: 51.68%25%3B Codon Adaptation Index (CAI): 0.65. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;gene=srpA;product=platelet-binding glycoprotein;protein_id=YP_001034807.1;transl_table=11
NC_009009.1	RefSeq	gene	812570	815794	.	+	.	ID=gene829;Dbxref=GeneID:4806104;Name=SSA_0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0830
NC_009009.1	RefSeq	CDS	812570	815794	.	+	0	ID=cds787;Parent=gene829;Dbxref=Genbank:YP_001034808.1,GeneID:4806104;Name=YP_001034808.1;Note=GC: 46.76%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): L. Ozaki;gbkey=CDS;product=glycosyltransferase;protein_id=YP_001034808.1;transl_table=11
NC_009009.1	RefSeq	gene	815811	816815	.	+	.	ID=gene830;Dbxref=GeneID:4806245;Name=SSA_0831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0831
NC_009009.1	RefSeq	CDS	815811	816815	.	+	0	ID=cds788;Parent=gene830;Dbxref=Genbank:YP_001034809.1,GeneID:4806245;Name=YP_001034809.1;Note=GC: 49.65%25%3B Codon Adaptation Index (CAI): 0.782. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034809.1;transl_table=11
NC_009009.1	RefSeq	gene	816848	818071	.	+	.	ID=gene831;Dbxref=GeneID:4806246;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SSA_0832
NC_009009.1	RefSeq	CDS	816848	818071	.	+	0	ID=cds789;Parent=gene831;Dbxref=Genbank:YP_001034810.1,GeneID:4806246;Name=YP_001034810.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=YP_001034810.1;transl_table=11
NC_009009.1	RefSeq	gene	818080	819660	.	+	.	ID=gene832;Dbxref=GeneID:4807298;Name=SSA_0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0833
NC_009009.1	RefSeq	CDS	818080	819660	.	+	0	ID=cds790;Parent=gene832;Dbxref=Genbank:YP_001034811.1,GeneID:4807298;Name=YP_001034811.1;Note=GC: 47.44%25%3B Transporter classification TC:3.A.5.10.1. Codon Adaptation Index (CAI): 0.781. Curator(s): L. Ozaki;gbkey=CDS;product=accessory secretory protein Asp1;protein_id=YP_001034811.1;transl_table=11
NC_009009.1	RefSeq	gene	819650	821179	.	+	.	ID=gene833;Dbxref=GeneID:4807299;Name=SSA_0834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0834
NC_009009.1	RefSeq	CDS	819650	821179	.	+	0	ID=cds791;Parent=gene833;Dbxref=Genbank:YP_001034812.1,GeneID:4807299;Name=YP_001034812.1;Note=GC: 47.32%25%3B Transporter classification TC:3.A.5.10.1. Codon Adaptation Index (CAI): 0.788. Curator(s): L. Ozaki;gbkey=CDS;product=accessory secretory protein Asp2;protein_id=YP_001034812.1;transl_table=11
NC_009009.1	RefSeq	gene	821176	821655	.	+	.	ID=gene834;Dbxref=GeneID:4806064;Name=SSA_0835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0835
NC_009009.1	RefSeq	CDS	821176	821655	.	+	0	ID=cds792;Parent=gene834;Dbxref=Genbank:YP_001034813.1,GeneID:4806064;Name=YP_001034813.1;Note=GC: 43.12%25%3B Transporter classification TC:3.A.5.10.1. Codon Adaptation Index (CAI): 0.758. Curator(s): L. Ozaki;gbkey=CDS;product=accessory secretory protein Asp3;protein_id=YP_001034813.1;transl_table=11
NC_009009.1	RefSeq	gene	821648	824029	.	+	.	ID=gene835;Dbxref=GeneID:4806065;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SSA_0836
NC_009009.1	RefSeq	CDS	821648	824029	.	+	0	ID=cds793;Parent=gene835;Dbxref=Genbank:YP_001034814.1,GeneID:4806065;Name=YP_001034814.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B in some organisms%2C especially gram positive pathogens%2C have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins;gbkey=CDS;gene=secA2;product=preprotein translocase subunit SecA;protein_id=YP_001034814.1;transl_table=11
NC_009009.1	RefSeq	gene	824042	825562	.	+	.	ID=gene836;Dbxref=GeneID:4805890;Name=SSA_0837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0837
NC_009009.1	RefSeq	CDS	824042	825562	.	+	0	ID=cds794;Parent=gene836;Dbxref=Genbank:YP_001034815.1,GeneID:4805890;Name=YP_001034815.1;Note=GC: 48.13%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): L. Ozaki;gbkey=CDS;product=glucosyltransferase;protein_id=YP_001034815.1;transl_table=11
NC_009009.1	RefSeq	gene	825546	826889	.	+	.	ID=gene837;Dbxref=GeneID:4805891;Name=SSA_0838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0838
NC_009009.1	RefSeq	CDS	825546	826889	.	+	0	ID=cds795;Parent=gene837;Dbxref=Genbank:YP_001034816.1,GeneID:4805891;Name=YP_001034816.1;Note=GC: 48.74%25%3B Codon Adaptation Index (CAI): 0.759. Curator(s): L. Ozaki;gbkey=CDS;product=GtfB;protein_id=YP_001034816.1;transl_table=11
NC_009009.1	RefSeq	gene	826891	827073	.	+	.	ID=gene838;Dbxref=GeneID:4806969;Name=SSA_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0839
NC_009009.1	RefSeq	CDS	826891	827073	.	+	0	ID=cds796;Parent=gene838;Dbxref=Genbank:YP_001034817.1,GeneID:4806969;Name=YP_001034817.1;Note=GC: 40.44%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.784. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034817.1;transl_table=11
NC_009009.1	RefSeq	gene	827075	827296	.	+	.	ID=gene839;Dbxref=GeneID:4806970;Name=SSA_0841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0841
NC_009009.1	RefSeq	CDS	827075	827296	.	+	0	ID=cds797;Parent=gene839;Dbxref=Genbank:YP_001034818.1,GeneID:4806970;Name=YP_001034818.1;Note=GC: 40.09%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.712. SignalP prediction: Yes (prob. 0.619)%3B Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034818.1;transl_table=11
NC_009009.1	RefSeq	gene	827470	827850	.	+	.	ID=gene840;Dbxref=GeneID:4806453;Name=SSA_0842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0842
NC_009009.1	RefSeq	CDS	827470	827850	.	+	0	ID=cds798;Parent=gene840;Dbxref=Genbank:YP_001034819.1,GeneID:4806453;Name=YP_001034819.1;Note=GC: 42.26%25%3B Transporter classification TC:1.E.14.1.2. Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.823. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=effector of murein hydrolase LrgA/holin-like protein;protein_id=YP_001034819.1;transl_table=11
NC_009009.1	RefSeq	gene	827822	828538	.	+	.	ID=gene841;Dbxref=GeneID:4806454;Name=SSA_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0843
NC_009009.1	RefSeq	CDS	827822	828538	.	+	0	ID=cds799;Parent=gene841;Dbxref=Genbank:YP_001034820.1,GeneID:4806454;Name=YP_001034820.1;Note=GC: 47.7%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.736. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034820.1;transl_table=11
NC_009009.1	RefSeq	gene	828581	829414	.	-	.	ID=gene842;Dbxref=GeneID:4806231;Name=SSA_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0844
NC_009009.1	RefSeq	CDS	828581	829414	.	-	0	ID=cds800;Parent=gene842;Dbxref=Genbank:YP_001034821.1,GeneID:4806231;Name=YP_001034821.1;Note=GC: 37.41%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.766. SignalP prediction: Yes (prob. 0.703)%3B Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034821.1;transl_table=11
NC_009009.1	RefSeq	gene	829429	830136	.	-	.	ID=gene843;Dbxref=GeneID:4806232;Name=SSA_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0845
NC_009009.1	RefSeq	CDS	829429	830136	.	-	0	ID=cds801;Parent=gene843;Dbxref=Genbank:YP_001034822.1,GeneID:4806232;Name=YP_001034822.1;Note=GC: 43.08%25%3B Transporter classification TC:3.A.1.126.1. Codon Adaptation Index (CAI): 0.794. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001034822.1;transl_table=11
NC_009009.1	RefSeq	gene	830218	833427	.	+	.	ID=gene844;Dbxref=GeneID:4807619;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SSA_0846
NC_009009.1	RefSeq	CDS	830218	833427	.	+	0	ID=cds802;Parent=gene844;Dbxref=Genbank:YP_001034823.1,GeneID:4807619;Name=YP_001034823.1;Note=Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.;gbkey=CDS;gene=dnaE;product=DNA polymerase III DnaE;protein_id=YP_001034823.1;transl_table=11
NC_009009.1	RefSeq	gene	833512	834522	.	+	.	ID=gene845;Dbxref=GeneID:4807620;Name=pfk;gbkey=Gene;gene=pfk;gene_biotype=protein_coding;locus_tag=SSA_0847
NC_009009.1	RefSeq	CDS	833512	834522	.	+	0	ID=cds803;Parent=gene845;Dbxref=Genbank:YP_001034824.1,GeneID:4807620;Name=YP_001034824.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;gene=pfk;product=6-phosphofructokinase;protein_id=YP_001034824.1;transl_table=11
NC_009009.1	RefSeq	gene	834579	836084	.	+	.	ID=gene846;Dbxref=GeneID:4806686;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=SSA_0848
NC_009009.1	RefSeq	CDS	834579	836084	.	+	0	ID=cds804;Parent=gene846;Dbxref=Genbank:YP_001034825.1,GeneID:4806686;Name=YP_001034825.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=pykF;product=pyruvate kinase;protein_id=YP_001034825.1;transl_table=11
NC_009009.1	RefSeq	gene	836267	836824	.	+	.	ID=gene847;Dbxref=GeneID:4806687;Name=sip;gbkey=Gene;gene=sip;gene_biotype=protein_coding;locus_tag=SSA_0849
NC_009009.1	RefSeq	CDS	836267	836824	.	+	0	ID=cds805;Parent=gene847;Dbxref=Genbank:YP_001034826.1,GeneID:4806687;Name=YP_001034826.1;Note=GC: 39.43%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.762. Curator(s): L. Ozaki;gbkey=CDS;gene=sip;product=Signal peptidase I;protein_id=YP_001034826.1;transl_table=11
NC_009009.1	RefSeq	gene	836958	837701	.	+	.	ID=gene848;Dbxref=GeneID:4807157;Name=SSA_0850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0850
NC_009009.1	RefSeq	CDS	836958	837701	.	+	0	ID=cds806;Parent=gene848;Dbxref=Genbank:YP_001034827.1,GeneID:4807157;Name=YP_001034827.1;Note=GC: 33.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): L. Ozaki;gbkey=CDS;product=ubiquitin C-terminal hydrolase;protein_id=YP_001034827.1;transl_table=11
NC_009009.1	RefSeq	gene	837734	838990	.	-	.	ID=gene849;Dbxref=GeneID:4807158;Name=SSA_0851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0851
NC_009009.1	RefSeq	CDS	837734	838990	.	-	0	ID=cds807;Parent=gene849;Dbxref=Genbank:YP_001034828.1,GeneID:4807158;Name=YP_001034828.1;Note=GC: 45.51%25%3B Transporter classification TC:2.A.4.1.5. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.76. Curator(s): L. Ozaki;gbkey=CDS;product=cation efflux family protein;protein_id=YP_001034828.1;transl_table=11
NC_009009.1	RefSeq	gene	839190	841478	.	+	.	ID=gene850;Dbxref=GeneID:4805866;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=SSA_0852
NC_009009.1	RefSeq	CDS	839190	841478	.	+	0	ID=cds808;Parent=gene850;Dbxref=Genbank:YP_001034829.1,GeneID:4805866;Name=YP_001034829.1;Note=GC: 48.01%25%3B Codon Adaptation Index (CAI): 0.775. Curator(s): L. Ozaki;gbkey=CDS;gene=pcrA;product=ATP-dependent DNA helicase;protein_id=YP_001034829.1;transl_table=11
NC_009009.1	RefSeq	gene	841475	841873	.	+	.	ID=gene851;Dbxref=GeneID:4805867;Name=SSA_0854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0854
NC_009009.1	RefSeq	CDS	841475	841873	.	+	0	ID=cds809;Parent=gene851;Dbxref=Genbank:YP_001034830.1,GeneID:4805867;Name=YP_001034830.1;Note=GC: 43.11%25%3B Codon Adaptation Index (CAI): 0.733. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034830.1;transl_table=11
NC_009009.1	RefSeq	gene	841972	843252	.	+	.	ID=gene852;Dbxref=GeneID:4807288;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=SSA_0855
NC_009009.1	RefSeq	CDS	841972	843252	.	+	0	ID=cds810;Parent=gene852;Dbxref=Genbank:YP_001034831.1,GeneID:4807288;Name=YP_001034831.1;Note=GC: 47.07%25%3B Codon Adaptation Index (CAI): 0.799. Curator(s): L. Ozaki;gbkey=CDS;gene=cysD;product=O-acetylhomoserine sulfhydrylase;protein_id=YP_001034831.1;transl_table=11
NC_009009.1	RefSeq	gene	843350	844276	.	+	.	ID=gene853;Dbxref=GeneID:4807289;Name=gtrB;gbkey=Gene;gene=gtrB;gene_biotype=protein_coding;locus_tag=SSA_0856
NC_009009.1	RefSeq	CDS	843350	844276	.	+	0	ID=cds811;Parent=gene853;Dbxref=Genbank:YP_001034832.1,GeneID:4807289;Name=YP_001034832.1;Note=GC: 45.52%25%3B Transporter classification TC:9.B.32.1.3. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.773. Curator(s): L. Ozaki;gbkey=CDS;gene=gtrB;product=glycosyl transferase family protein;protein_id=YP_001034832.1;transl_table=11
NC_009009.1	RefSeq	gene	844319	845542	.	+	.	ID=gene854;Dbxref=GeneID:4806076;Name=SSA_0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0857
NC_009009.1	RefSeq	CDS	844319	845542	.	+	0	ID=cds812;Parent=gene854;Dbxref=Genbank:YP_001034833.1,GeneID:4806076;Name=YP_001034833.1;Note=GC: 37.09%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.756. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034833.1;transl_table=11
NC_009009.1	RefSeq	gene	845652	846506	.	+	.	ID=gene855;Dbxref=GeneID:4806077;Name=rmlD;gbkey=Gene;gene=rmlD;gene_biotype=protein_coding;locus_tag=SSA_0858
NC_009009.1	RefSeq	CDS	845652	846506	.	+	0	ID=cds813;Parent=gene855;Dbxref=Genbank:YP_001034834.1,GeneID:4806077;Name=YP_001034834.1;Note=GC: 46.43%25%3B Codon Adaptation Index (CAI): 0.808. Curator(s): L. Ozaki;gbkey=CDS;gene=rmlD;product=dTDP-L-rhamnose synthase;protein_id=YP_001034834.1;transl_table=11
NC_009009.1	RefSeq	gene	846781	847545	.	+	.	ID=gene856;Dbxref=GeneID:4807645;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=SSA_0859
NC_009009.1	RefSeq	CDS	846781	847545	.	+	0	ID=cds814;Parent=gene856;Dbxref=Genbank:YP_001034835.1,GeneID:4807645;Name=YP_001034835.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=YP_001034835.1;transl_table=11
NC_009009.1	RefSeq	gene	847755	851798	.	+	.	ID=gene857;Dbxref=GeneID:4807646;Name=SSA_0860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0860
NC_009009.1	RefSeq	CDS	847755	851798	.	+	0	ID=cds815;Parent=gene857;Dbxref=Genbank:YP_001034836.1,GeneID:4807646;Name=YP_001034836.1;Note=GC: 45.85%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): L. Ozaki;gbkey=CDS;product=N-acetylmuramidase/lysin;protein_id=YP_001034836.1;transl_table=11
NC_009009.1	RefSeq	gene	851832	853067	.	-	.	ID=gene858;Dbxref=GeneID:4805917;Name=murN;gbkey=Gene;gene=murN;gene_biotype=protein_coding;locus_tag=SSA_0861
NC_009009.1	RefSeq	CDS	851832	853067	.	-	0	ID=cds816;Parent=gene858;Dbxref=Genbank:YP_001034837.1,GeneID:4805917;Name=YP_001034837.1;Note=GC: 46.04%25%3B Codon Adaptation Index (CAI): 0.773. Possibly involved in methicillin resistance. Curator(s): L. Ozaki;gbkey=CDS;gene=murN;product=hypothetical protein;protein_id=YP_001034837.1;transl_table=11
NC_009009.1	RefSeq	gene	853082	854311	.	-	.	ID=gene859;Dbxref=GeneID:4805918;Name=murM;gbkey=Gene;gene=murM;gene_biotype=protein_coding;locus_tag=SSA_0862
NC_009009.1	RefSeq	CDS	853082	854311	.	-	0	ID=cds817;Parent=gene859;Dbxref=Genbank:YP_001034838.1,GeneID:4805918;Name=YP_001034838.1;Note=GC: 45.93%25%3B Codon Adaptation Index (CAI): 0.786. Helix-turn-helix prediction: AraC. Curator(s): L. Ozaki;gbkey=CDS;gene=murM;product=MurM protein;protein_id=YP_001034838.1;transl_table=11
NC_009009.1	RefSeq	gene	854296	855105	.	-	.	ID=gene860;Dbxref=GeneID:4805772;Name=SSA_0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0863
NC_009009.1	RefSeq	CDS	854296	855105	.	-	0	ID=cds818;Parent=gene860;Dbxref=Genbank:YP_001034839.1,GeneID:4805772;Name=YP_001034839.1;Note=GC: 44.2%25%3B Codon Adaptation Index (CAI): 0.799. Curator(s): L. Ozaki;gbkey=CDS;product=Cof family protein;protein_id=YP_001034839.1;transl_table=11
NC_009009.1	RefSeq	gene	855107	856408	.	-	.	ID=gene861;Dbxref=GeneID:4806351;Name=SSA_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0864
NC_009009.1	RefSeq	CDS	855107	856408	.	-	0	ID=cds819;Parent=gene861;Dbxref=Genbank:YP_001034840.1,GeneID:4806351;Name=YP_001034840.1;Note=GC: 45.93%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034840.1;transl_table=11
NC_009009.1	RefSeq	gene	856518	856910	.	+	.	ID=gene862;Dbxref=GeneID:4807338;Name=SSA_0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0865
NC_009009.1	RefSeq	CDS	856518	856910	.	+	0	ID=cds820;Parent=gene862;Dbxref=Genbank:YP_001034841.1,GeneID:4807338;Name=YP_001034841.1;Note=GC: 42.49%25%3B Codon Adaptation Index (CAI): 0.802. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034841.1;transl_table=11
NC_009009.1	RefSeq	gene	857123	859891	.	+	.	ID=gene863;Dbxref=GeneID:4805978;Name=pacL;gbkey=Gene;gene=pacL;gene_biotype=protein_coding;locus_tag=SSA_0866
NC_009009.1	RefSeq	CDS	857123	859891	.	+	0	ID=cds821;Parent=gene863;Dbxref=Genbank:YP_001034842.1,GeneID:4805978;Name=YP_001034842.1;Note=GC: 45.43%25%3B Transporter classification TC:3.A.3.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.805. Curator(s): L. Ozaki;gbkey=CDS;gene=pacL;product=cation transporter E1-E2 family ATPase;protein_id=YP_001034842.1;transl_table=11
NC_009009.1	RefSeq	gene	859980	860771	.	+	.	ID=gene864;Dbxref=GeneID:4807723;Name=SSA_0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0867
NC_009009.1	RefSeq	CDS	859980	860771	.	+	0	ID=cds822;Parent=gene864;Dbxref=Genbank:YP_001034843.1,GeneID:4807723;Name=YP_001034843.1;Note=GC: 40.03%25%3B Codon Adaptation Index (CAI): 0.735. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034843.1;transl_table=11
NC_009009.1	RefSeq	gene	860765	861625	.	-	.	ID=gene865;Dbxref=GeneID:4805795;Name=SSA_0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0868
NC_009009.1	RefSeq	CDS	860765	861625	.	-	0	ID=cds823;Parent=gene865;Dbxref=Genbank:YP_001034844.1,GeneID:4805795;Name=YP_001034844.1;Note=GC: 43.21%25%3B Codon Adaptation Index (CAI): 0.776. Helix-turn-helix prediction: AraC. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034844.1;transl_table=11
NC_009009.1	RefSeq	gene	862054	863031	.	+	.	ID=gene866;Dbxref=GeneID:4807039;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=SSA_0869
NC_009009.1	RefSeq	CDS	862054	863031	.	+	0	ID=cds824;Parent=gene866;Dbxref=Genbank:YP_001034845.1,GeneID:4807039;Name=YP_001034845.1;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=YP_001034845.1;transl_table=11
NC_009009.1	RefSeq	gene	863076	863768	.	+	.	ID=gene867;Dbxref=GeneID:4806318;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=SSA_0870
NC_009009.1	RefSeq	CDS	863076	863768	.	+	0	ID=cds825;Parent=gene867;Dbxref=Genbank:YP_001034846.1,GeneID:4806318;Name=YP_001034846.1;Note=GC: 46.03%25%3B Transporter classification TC:3.A.5.1.1. Codon Adaptation Index (CAI): 0.786. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;gene=ftsE;product=cell division protein FtsE;protein_id=YP_001034846.1;transl_table=11
NC_009009.1	RefSeq	gene	863761	864687	.	+	.	ID=gene868;Dbxref=GeneID:4806380;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SSA_0871
NC_009009.1	RefSeq	CDS	863761	864687	.	+	0	ID=cds826;Parent=gene868;Dbxref=Genbank:YP_001034847.1,GeneID:4806380;Name=YP_001034847.1;Note=GC: 39.48%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.792. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): L. Ozaki;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=YP_001034847.1;transl_table=11
NC_009009.1	RefSeq	gene	864757	865395	.	-	.	ID=gene869;Dbxref=GeneID:4807991;Name=SSA_0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0872
NC_009009.1	RefSeq	CDS	864757	865395	.	-	0	ID=cds827;Parent=gene869;Dbxref=Genbank:YP_001034848.1,GeneID:4807991;Name=YP_001034848.1;Note=GC: 45.85%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): L. Ozaki;gbkey=CDS;product=Zn-dependent hydrolases%2C including glyoxylases;protein_id=YP_001034848.1;transl_table=11
NC_009009.1	RefSeq	gene	865531	867975	.	+	.	ID=gene870;Dbxref=GeneID:4806533;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=SSA_0873
NC_009009.1	RefSeq	CDS	865531	867975	.	+	0	ID=cds828;Parent=gene870;Dbxref=Genbank:YP_001034849.1,GeneID:4806533;Name=YP_001034849.1;Note=GC: 45.11%25%3B Codon Adaptation Index (CAI): 0.794. Curator(s): L. Ozaki;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase%3B DNA polymerase III%2C epsilon subunit;protein_id=YP_001034849.1;transl_table=11
NC_009009.1	RefSeq	gene	868075	869055	.	+	.	ID=gene871;Dbxref=GeneID:4807121;Name=SSA_0874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0874
NC_009009.1	RefSeq	CDS	868075	869055	.	+	0	ID=cds829;Parent=gene871;Dbxref=Genbank:YP_001034850.1,GeneID:4807121;Name=YP_001034850.1;Note=GC: 44.34%25%3B Transporter classification TC:9.B.63.1.2. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.756. SignalP prediction: Yes (prob. 0.998)%3B Curator(s): L. Ozaki %2C J. Alves%3B (possible metabolite efflux protein);gbkey=CDS;product=hypothetical protein;protein_id=YP_001034850.1;transl_table=11
NC_009009.1	RefSeq	gene	869068	870300	.	+	.	ID=gene872;Dbxref=GeneID:4807713;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=SSA_0875
NC_009009.1	RefSeq	CDS	869068	870300	.	+	0	ID=cds830;Parent=gene872;Dbxref=Genbank:YP_001034851.1,GeneID:4807713;Name=YP_001034851.1;Note=GC: 44.77%25%3B Transporter classification TC:9.B.3.1.3. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.775. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;gene=rodA;product=rod shape determining protein (cell-cycle protein);protein_id=YP_001034851.1;transl_table=11
NC_009009.1	RefSeq	gene	870373	870921	.	+	.	ID=gene873;Dbxref=GeneID:4806370;Name=thiJ;gbkey=Gene;gene=thiJ;gene_biotype=protein_coding;locus_tag=SSA_0876
NC_009009.1	RefSeq	CDS	870373	870921	.	+	0	ID=cds831;Parent=gene873;Dbxref=Genbank:YP_001034852.1,GeneID:4806370;Name=YP_001034852.1;Note=GC: 47.18%25%3B Codon Adaptation Index (CAI): 0.804. Curator(s): L. Ozaki;gbkey=CDS;gene=thiJ;product=4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein;protein_id=YP_001034852.1;transl_table=11
NC_009009.1	RefSeq	gene	871148	871723	.	+	.	ID=gene874;Dbxref=GeneID:4806006;Name=SSA_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0877
NC_009009.1	RefSeq	CDS	871148	871723	.	+	0	ID=cds832;Parent=gene874;Dbxref=Genbank:YP_001034853.1,GeneID:4806006;Name=YP_001034853.1;Note=GC: 43.58%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): L. Ozaki;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=YP_001034853.1;transl_table=11
NC_009009.1	RefSeq	gene	871736	873685	.	+	.	ID=gene875;Dbxref=GeneID:4806948;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SSA_0878
NC_009009.1	RefSeq	CDS	871736	873685	.	+	0	ID=cds833;Parent=gene875;Dbxref=Genbank:YP_001034854.1,GeneID:4806948;Name=YP_001034854.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=YP_001034854.1;transl_table=11
NC_009009.1	RefSeq	gene	873772	875496	.	+	.	ID=gene876;Dbxref=GeneID:4807457;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=SSA_0879
NC_009009.1	RefSeq	CDS	873772	875496	.	+	0	ID=cds834;Parent=gene876;Dbxref=Genbank:YP_001034855.1,GeneID:4807457;Name=YP_001034855.1;Note=acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation;gbkey=CDS;gene=ezrA;product=septation ring formation regulator EzrA;protein_id=YP_001034855.1;transl_table=11
NC_009009.1	RefSeq	gene	875591	876268	.	+	.	ID=gene877;Dbxref=GeneID:4807856;Name=SSA_0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0880
NC_009009.1	RefSeq	CDS	875591	876268	.	+	0	ID=cds835;Parent=gene877;Dbxref=Genbank:YP_001034856.1,GeneID:4807856;Name=YP_001034856.1;Note=GC: 31.56%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.765. SignalP prediction: Yes (prob. 0.619)%3B Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034856.1;transl_table=11
NC_009009.1	RefSeq	gene	876344	877009	.	+	.	ID=gene878;Dbxref=GeneID:4807420;Name=SSA_0881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0881
NC_009009.1	RefSeq	CDS	876344	877009	.	+	0	ID=cds836;Parent=gene878;Dbxref=Genbank:YP_001034857.1,GeneID:4807420;Name=YP_001034857.1;Note=GC: 31.83%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.734. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.942)%3B Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034857.1;transl_table=11
NC_009009.1	RefSeq	gene	877043	877690	.	+	.	ID=gene879;Dbxref=GeneID:4807954;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SSA_0882
NC_009009.1	RefSeq	CDS	877043	877690	.	+	0	ID=cds837;Parent=gene879;Dbxref=Genbank:YP_001034858.1,GeneID:4807954;Name=YP_001034858.1;Note=GC: 47.07%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): L. Ozaki;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=YP_001034858.1;transl_table=11
NC_009009.1	RefSeq	gene	877700	878818	.	+	.	ID=gene880;Dbxref=GeneID:4807492;Name=grk;gbkey=Gene;gene=grk;gene_biotype=protein_coding;locus_tag=SSA_0883
NC_009009.1	RefSeq	CDS	877700	878818	.	+	0	ID=cds838;Parent=gene880;Dbxref=Genbank:YP_001034859.1,GeneID:4807492;Name=YP_001034859.1;Note=GC: 49.78%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): L. Ozaki;gbkey=CDS;gene=grk;product=glycerate kinase;protein_id=YP_001034859.1;transl_table=11
NC_009009.1	RefSeq	gene	878815	879153	.	-	.	ID=gene881;Dbxref=GeneID:4807849;Name=SSA_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0884
NC_009009.1	RefSeq	CDS	878815	879153	.	-	0	ID=cds839;Parent=gene881;Dbxref=Genbank:YP_001034860.1,GeneID:4807849;Name=YP_001034860.1;Note=GC: 34.81%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034860.1;transl_table=11
NC_009009.1	RefSeq	gene	879155	879604	.	-	.	ID=gene882;Dbxref=GeneID:4807962;Name=SSA_0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0885
NC_009009.1	RefSeq	CDS	879155	879604	.	-	0	ID=cds840;Parent=gene882;Dbxref=Genbank:YP_001034861.1,GeneID:4807962;Name=YP_001034861.1;Note=GC: 43.78%25%3B Codon Adaptation Index (CAI): 0.794. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034861.1;transl_table=11
NC_009009.1	RefSeq	gene	879813	881117	.	+	.	ID=gene883;Dbxref=GeneID:4805878;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SSA_0886
NC_009009.1	RefSeq	CDS	879813	881117	.	+	0	ID=cds841;Parent=gene883;Dbxref=Genbank:YP_001034862.1,GeneID:4805878;Name=YP_001034862.1;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=YP_001034862.1;transl_table=11
NC_009009.1	RefSeq	gene	881255	881356	.	-	.	ID=gene884;Dbxref=GeneID:4807985;Name=SSA_0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0887
NC_009009.1	RefSeq	CDS	881255	881356	.	-	0	ID=cds842;Parent=gene884;Dbxref=Genbank:YP_001034863.1,GeneID:4807985;Name=YP_001034863.1;Note=GC: 37.25%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034863.1;transl_table=11
NC_009009.1	RefSeq	gene	881469	882809	.	+	.	ID=gene885;Dbxref=GeneID:4808027;Name=SSA_0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0888
NC_009009.1	RefSeq	CDS	881469	882809	.	+	0	ID=cds843;Parent=gene885;Dbxref=Genbank:YP_001034864.1,GeneID:4808027;Name=YP_001034864.1;Note=GC: 39.15%25%3B Transporter classification TC:9.A.19.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.766. Curator(s): L. Ozaki;gbkey=CDS;product=magnesium/cobalt transporter;protein_id=YP_001034864.1;transl_table=11
NC_009009.1	RefSeq	gene	882853	883044	.	-	.	ID=gene886;Dbxref=GeneID:4807804;Name=SSA_0889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0889
NC_009009.1	RefSeq	CDS	882853	883044	.	-	0	ID=cds844;Parent=gene886;Dbxref=Genbank:YP_001034865.1,GeneID:4807804;Name=YP_001034865.1;Note=GC: 32.81%25%3B Codon Adaptation Index (CAI): 0.815. Curator(s): L. Ozaki;gbkey=CDS;product=isoleucyl-tRNA synthetase;protein_id=YP_001034865.1;transl_table=11
NC_009009.1	RefSeq	gene	883113	884123	.	-	.	ID=gene887;Dbxref=GeneID:4806946;Name=SSA_0891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0891
NC_009009.1	RefSeq	CDS	883113	884123	.	-	0	ID=cds845;Parent=gene887;Dbxref=Genbank:YP_001034866.1,GeneID:4806946;Name=YP_001034866.1;Note=GC: 46.59%25%3B Codon Adaptation Index (CAI): 0.763. Curator(s): L. Ozaki;gbkey=CDS;product=3-carboxymuconate cyclase;protein_id=YP_001034866.1;transl_table=11
NC_009009.1	RefSeq	gene	884366	884638	.	+	.	ID=gene888;Dbxref=GeneID:4806118;Name=SSA_0892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0892
NC_009009.1	RefSeq	CDS	884366	884638	.	+	0	ID=cds846;Parent=gene888;Dbxref=Genbank:YP_001034867.1,GeneID:4806118;Name=YP_001034867.1;Note=GC: 41.76%25%3B Codon Adaptation Index (CAI): 0.77. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.879)%3B Curator(s): L. Ozaki;gbkey=CDS;product=ATP-binding cassette lipoprotein;protein_id=YP_001034867.1;transl_table=11
NC_009009.1	RefSeq	gene	884667	885932	.	+	.	ID=gene889;Dbxref=GeneID:4807377;Name=SSA_0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0893
NC_009009.1	RefSeq	CDS	884667	885932	.	+	0	ID=cds847;Parent=gene889;Dbxref=Genbank:YP_001034868.1,GeneID:4807377;Name=YP_001034868.1;Note=GC: 44.55%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.805. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.943)%3B Curator(s): L. Ozaki;gbkey=CDS;product=ATP-binding cassette transporter-like protein;protein_id=YP_001034868.1;transl_table=11
NC_009009.1	RefSeq	gene	885919	886593	.	+	.	ID=gene890;Dbxref=GeneID:4806526;Name=SSA_0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0894
NC_009009.1	RefSeq	CDS	885919	886593	.	+	0	ID=cds848;Parent=gene890;Dbxref=Genbank:YP_001034869.1,GeneID:4806526;Name=YP_001034869.1;Note=GC: 47.11%25%3B Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.767. Curator(s): L. Ozaki;gbkey=CDS;product=ATP-binding cassette protein;protein_id=YP_001034869.1;transl_table=11
NC_009009.1	RefSeq	gene	886606	887823	.	+	.	ID=gene891;Dbxref=GeneID:4806398;Name=SSA_0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0895
NC_009009.1	RefSeq	CDS	886606	887823	.	+	0	ID=cds849;Parent=gene891;Dbxref=Genbank:YP_001034870.1,GeneID:4806398;Name=YP_001034870.1;Note=GC: 45.32%25%3B Transporter classification TC:3.A.1.122.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.778. SignalP prediction: Yes (prob. 0.46)%3B Curator(s): L. Ozaki;gbkey=CDS;product=ATP-binding cassette transporter-like protein;protein_id=YP_001034870.1;transl_table=11
NC_009009.1	RefSeq	gene	887845	888501	.	+	.	ID=gene892;Dbxref=GeneID:4806008;Name=SSA_0896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0896
NC_009009.1	RefSeq	CDS	887845	888501	.	+	0	ID=cds850;Parent=gene892;Dbxref=Genbank:YP_001034871.1,GeneID:4806008;Name=YP_001034871.1;Note=GC: 45.36%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001034871.1;transl_table=11
NC_009009.1	RefSeq	gene	888498	889871	.	+	.	ID=gene893;Dbxref=GeneID:4805787;Name=SSA_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0897
NC_009009.1	RefSeq	CDS	888498	889871	.	+	0	ID=cds851;Parent=gene893;Dbxref=Genbank:YP_001034872.1,GeneID:4805787;Name=YP_001034872.1;Note=GC: 45.27%25%3B Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.78. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.982)%3B Curator(s): L. Ozaki;gbkey=CDS;product=two component system histidine kinase;protein_id=YP_001034872.1;transl_table=11
NC_009009.1	RefSeq	gene	889858	889953	.	-	.	ID=gene894;Dbxref=GeneID:4805901;Name=SSA_0898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0898
NC_009009.1	RefSeq	CDS	889858	889953	.	-	0	ID=cds852;Parent=gene894;Dbxref=Genbank:YP_001034873.1,GeneID:4805901;Name=YP_001034873.1;Note=GC: 43.75%25%3B Codon Adaptation Index (CAI): 0.778. Curator(s): L. Ozaki;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034873.1;transl_table=11
NC_009009.1	RefSeq	gene	890043	891221	.	+	.	ID=gene895;Dbxref=GeneID:4806635;Name=SSA_0899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0899
NC_009009.1	RefSeq	CDS	890043	891221	.	+	0	ID=cds853;Parent=gene895;Dbxref=Genbank:YP_001034874.1,GeneID:4806635;Name=YP_001034874.1;Note=GC: 41.9%25%3B Transporter classification TC:9.B.22.1.1. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.798. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=permease;protein_id=YP_001034874.1;transl_table=11
NC_009009.1	RefSeq	gene	891208	892437	.	+	.	ID=gene896;Dbxref=GeneID:4806119;Name=SSA_0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0900
NC_009009.1	RefSeq	CDS	891208	892437	.	+	0	ID=cds854;Parent=gene896;Dbxref=Genbank:YP_001034875.1,GeneID:4806119;Name=YP_001034875.1;Note=GC: 46.02%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034875.1;transl_table=11
NC_009009.1	RefSeq	gene	892587	893306	.	+	.	ID=gene897;Dbxref=GeneID:4807786;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=SSA_0901
NC_009009.1	RefSeq	CDS	892587	893306	.	+	0	ID=cds855;Parent=gene897;Dbxref=Genbank:YP_001034876.1,GeneID:4807786;Name=YP_001034876.1;Note=GC: 45.83%25%3B Codon Adaptation Index (CAI): 0.808. Curator(s): L. Ozaki;gbkey=CDS;gene=aldB;product=alpha-acetolactate decarboxylase;protein_id=YP_001034876.1;transl_table=11
NC_009009.1	RefSeq	gene	893382	893873	.	+	.	ID=gene898;Dbxref=GeneID:4806998;Name=SSA_0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0903
NC_009009.1	RefSeq	CDS	893382	893873	.	+	0	ID=cds856;Parent=gene898;Dbxref=Genbank:YP_001034877.1,GeneID:4806998;Name=YP_001034877.1;Note=GC: 44.31%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=YP_001034877.1;transl_table=11
NC_009009.1	RefSeq	gene	894046	903018	.	+	.	ID=gene899;Dbxref=GeneID:4807161;Name=crpA;gbkey=Gene;gene=crpA;gene_biotype=protein_coding;locus_tag=SSA_0904
NC_009009.1	RefSeq	CDS	894046	903018	.	+	0	ID=cds857;Parent=gene899;Dbxref=Genbank:YP_001034878.1,GeneID:4807161;Name=YP_001034878.1;Note=GC: 46.68%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): L. Ozaki %2C J. Alves;gbkey=CDS;gene=crpA;product=CshA-like fibrillar surface protein A;protein_id=YP_001034878.1;transl_table=11
NC_009009.1	RefSeq	gene	903220	909120	.	+	.	ID=gene900;Dbxref=GeneID:4807475;Name=crpB;gbkey=Gene;gene=crpB;gene_biotype=protein_coding;locus_tag=SSA_0905
NC_009009.1	RefSeq	CDS	903220	909120	.	+	0	ID=cds858;Parent=gene900;Dbxref=Genbank:YP_001034879.1,GeneID:4807475;Name=YP_001034879.1;Note=GC: 46.38%25%3B Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=crpB;product=CshA-like fibrillar surface protein B;protein_id=YP_001034879.1;transl_table=11
NC_009009.1	RefSeq	gene	909462	917471	.	+	.	ID=gene901;Dbxref=GeneID:4807046;Name=crpC;gbkey=Gene;gene=crpC;gene_biotype=protein_coding;locus_tag=SSA_0906
NC_009009.1	RefSeq	CDS	909462	917471	.	+	0	ID=cds859;Parent=gene901;Dbxref=Genbank:YP_001034880.1,GeneID:4807046;Name=YP_001034880.1;Note=GC: 46.28%25%3B Codon Adaptation Index (CAI): 0.794. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=crpC;product=CshA-like fibrillar surface protein C;protein_id=YP_001034880.1;transl_table=11
NC_009009.1	RefSeq	gene	917658	919307	.	-	.	ID=gene902;Dbxref=GeneID:4807342;Name=SSA_0907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0907
NC_009009.1	RefSeq	CDS	917658	919307	.	-	0	ID=cds860;Parent=gene902;Dbxref=Genbank:YP_001034881.1,GeneID:4807342;Name=YP_001034881.1;Note=GC: 46.85%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): T. Kitten;gbkey=CDS;product=fibronectin-binding protein A;protein_id=YP_001034881.1;transl_table=11
NC_009009.1	RefSeq	gene	919840	920847	.	+	.	ID=gene903;Dbxref=GeneID:4807017;Name=SSA_0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0908
NC_009009.1	RefSeq	CDS	919840	920847	.	+	0	ID=cds861;Parent=gene903;Dbxref=Genbank:YP_001034882.1,GeneID:4807017;Name=YP_001034882.1;Note=GC: 44.25%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.809. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=ABC transporter periplasmic protein;protein_id=YP_001034882.1;transl_table=11
NC_009009.1	RefSeq	gene	921027	921218	.	+	.	ID=gene904;Dbxref=GeneID:4807463;Name=SSA_0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0909
NC_009009.1	RefSeq	CDS	921027	921218	.	+	0	ID=cds862;Parent=gene904;Dbxref=Genbank:YP_001034883.1,GeneID:4807463;Name=YP_001034883.1;Note=GC: 43.75%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=AbrB family transcriptional regulator;protein_id=YP_001034883.1;transl_table=11
NC_009009.1	RefSeq	gene	921496	922221	.	+	.	ID=gene905;Dbxref=GeneID:4806908;Name=SSA_0910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0910
NC_009009.1	RefSeq	CDS	921496	922221	.	+	0	ID=cds863;Parent=gene905;Dbxref=Genbank:YP_001034884.1,GeneID:4806908;Name=YP_001034884.1;Note=GC: 46.56%25%3B Transporter classification TC:3.A.1.105.2. Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001034884.1;transl_table=11
NC_009009.1	RefSeq	gene	922218	922958	.	+	.	ID=gene906;Dbxref=GeneID:4807758;Name=SSA_0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0911
NC_009009.1	RefSeq	CDS	922218	922958	.	+	0	ID=cds864;Parent=gene906;Dbxref=Genbank:YP_001034885.1,GeneID:4807758;Name=YP_001034885.1;Note=GC: 42.11%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.767. SignalP prediction: Yes (prob. 0.557)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034885.1;transl_table=11
NC_009009.1	RefSeq	gene	923240	924289	.	+	.	ID=gene907;Dbxref=GeneID:4805870;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=SSA_0912
NC_009009.1	RefSeq	CDS	923240	924289	.	+	0	ID=cds865;Parent=gene907;Dbxref=Genbank:YP_001034886.1,GeneID:4805870;Name=YP_001034886.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily;gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=YP_001034886.1;transl_table=11
NC_009009.1	RefSeq	gene	924335	924844	.	+	.	ID=gene908;Dbxref=GeneID:4807554;Name=SSA_0913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0913
NC_009009.1	RefSeq	CDS	924335	924844	.	+	0	ID=cds866;Parent=gene908;Dbxref=Genbank:YP_001034887.1,GeneID:4807554;Name=YP_001034887.1;Note=GC: 42.55%25%3B Codon Adaptation Index (CAI): 0.799. Curator(s): T. Kitten;gbkey=CDS;product=acetyltransferase;protein_id=YP_001034887.1;transl_table=11
NC_009009.1	RefSeq	gene	925092	927497	.	+	.	ID=gene909;Dbxref=GeneID:4807961;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SSA_0914
NC_009009.1	RefSeq	CDS	925092	927497	.	+	0	ID=cds867;Parent=gene909;Dbxref=Genbank:YP_001034888.1,GeneID:4807961;Name=YP_001034888.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_001034888.1;transl_table=11
NC_009009.1	RefSeq	gene	927682	928074	.	+	.	ID=gene910;Dbxref=GeneID:4807523;Name=SSA_0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0915
NC_009009.1	RefSeq	CDS	927682	928074	.	+	0	ID=cds868;Parent=gene910;Dbxref=Genbank:YP_001034889.1,GeneID:4807523;Name=YP_001034889.1;Note=GC: 44.27%25%3B Codon Adaptation Index (CAI): 0.756. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034889.1;transl_table=11
NC_009009.1	RefSeq	gene	928225	929052	.	+	.	ID=gene911;Dbxref=GeneID:4805971;Name=SSA_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0916
NC_009009.1	RefSeq	CDS	928225	929052	.	+	0	ID=cds869;Parent=gene911;Dbxref=Genbank:YP_001034890.1,GeneID:4805971;Name=YP_001034890.1;Note=GC: 41.43%25%3B Codon Adaptation Index (CAI): 0.751. Curator(s): T. Kitten;gbkey=CDS;product=2-hydroxy-6-oxo-6-phenylhexa-2%2C4-dienoate hydrolase;protein_id=YP_001034890.1;transl_table=11
NC_009009.1	RefSeq	gene	929177	930340	.	-	.	ID=gene912;Dbxref=GeneID:4805792;Name=SSA_0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0917
NC_009009.1	RefSeq	CDS	929177	930340	.	-	0	ID=cds870;Parent=gene912;Dbxref=Genbank:YP_001034891.1,GeneID:4805792;Name=YP_001034891.1;Note=GC: 48.28%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=cobalamin-independent methionine synthase II;protein_id=YP_001034891.1;transl_table=11
NC_009009.1	RefSeq	gene	930538	931005	.	+	.	ID=gene913;Dbxref=GeneID:4808112;Name=SSA_0918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0918
NC_009009.1	RefSeq	CDS	930538	931005	.	+	0	ID=cds871;Parent=gene913;Dbxref=Genbank:YP_001034892.1,GeneID:4808112;Name=YP_001034892.1;Note=GC: 44.44%25%3B Codon Adaptation Index (CAI): 0.78. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034892.1;transl_table=11
NC_009009.1	RefSeq	gene	931036	931131	.	+	.	ID=gene914;Dbxref=GeneID:4806555;Name=SSA_0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0920
NC_009009.1	RefSeq	CDS	931036	931131	.	+	0	ID=cds872;Parent=gene914;Dbxref=Genbank:YP_001034893.1,GeneID:4806555;Name=YP_001034893.1;Note=GC: 29.17%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034893.1;transl_table=11
NC_009009.1	RefSeq	gene	931187	932224	.	+	.	ID=gene915;Dbxref=GeneID:4807872;Name=adhB;gbkey=Gene;gene=adhB;gene_biotype=protein_coding;locus_tag=SSA_0921
NC_009009.1	RefSeq	CDS	931187	932224	.	+	0	ID=cds873;Parent=gene915;Dbxref=Genbank:YP_001034894.1,GeneID:4807872;Name=YP_001034894.1;Note=GC: 48.27%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): T. Kitten;gbkey=CDS;gene=adhB;product=Zn-dependeant threonine dehydrogenase;protein_id=YP_001034894.1;transl_table=11
NC_009009.1	RefSeq	gene	932315	933040	.	-	.	ID=gene916;Dbxref=GeneID:4806824;Name=SSA_0922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0922
NC_009009.1	RefSeq	CDS	932315	933040	.	-	0	ID=cds874;Parent=gene916;Dbxref=Genbank:YP_001034895.1,GeneID:4806824;Name=YP_001034895.1;Note=GC: 44.35%25%3B Codon Adaptation Index (CAI): 0.749. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034895.1;transl_table=11
NC_009009.1	RefSeq	gene	933150	933758	.	+	.	ID=gene917;Dbxref=GeneID:4807557;Name=SSA_0923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0923
NC_009009.1	RefSeq	CDS	933150	933758	.	+	0	ID=cds875;Parent=gene917;Dbxref=Genbank:YP_001034896.1,GeneID:4807557;Name=YP_001034896.1;Note=GC: 43.51%25%3B Codon Adaptation Index (CAI): 0.788. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001034896.1;transl_table=11
NC_009009.1	RefSeq	gene	933878	934888	.	+	.	ID=gene918;Dbxref=GeneID:4808098;Name=SSA_0924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0924
NC_009009.1	RefSeq	CDS	933878	934888	.	+	0	ID=cds876;Parent=gene918;Dbxref=Genbank:YP_001034897.1,GeneID:4808098;Name=YP_001034897.1;Note=GC: 44.41%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 0.487)%3B Curator(s): T. Kitten;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_001034897.1;transl_table=11
NC_009009.1	RefSeq	gene	934889	935554	.	+	.	ID=gene919;Dbxref=GeneID:4806826;Name=SSA_0925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0925
NC_009009.1	RefSeq	CDS	934889	935554	.	+	0	ID=cds877;Parent=gene919;Dbxref=Genbank:YP_001034898.1,GeneID:4806826;Name=YP_001034898.1;Note=GC: 48.05%25%3B Transporter classification TC:3.A.1.114.1. Codon Adaptation Index (CAI): 0.767. Curator(s): T. Kitten;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001034898.1;transl_table=11
NC_009009.1	RefSeq	gene	935605	936021	.	+	.	ID=gene920;Dbxref=GeneID:4807795;Name=SSA_0926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0926
NC_009009.1	RefSeq	CDS	935605	936021	.	+	0	ID=cds878;Parent=gene920;Dbxref=Genbank:YP_001034899.1,GeneID:4807795;Name=YP_001034899.1;Note=GC: 45.08%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): T. Kitten;gbkey=CDS;product=histone acetyltransferase HPA2-like acetyltransferase;protein_id=YP_001034899.1;transl_table=11
NC_009009.1	RefSeq	gene	936189	936800	.	+	.	ID=gene921;Dbxref=GeneID:4805782;Name=SSA_0927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0927
NC_009009.1	RefSeq	CDS	936189	936800	.	+	0	ID=cds879;Parent=gene921;Dbxref=Genbank:YP_001034900.1,GeneID:4805782;Name=YP_001034900.1;Note=GC: 47.39%25%3B Codon Adaptation Index (CAI): 0.768. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001034900.1;transl_table=11
NC_009009.1	RefSeq	gene	936819	938585	.	+	.	ID=gene922;Dbxref=GeneID:4806466;Name=SSA_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0928
NC_009009.1	RefSeq	CDS	936819	938585	.	+	0	ID=cds880;Parent=gene922;Dbxref=Genbank:YP_001034901.1,GeneID:4806466;Name=YP_001034901.1;Note=GC: 45.16%25%3B Transporter classification TC:3.A.1.21.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.794. SignalP prediction: Yes (prob. 0.563)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001034901.1;transl_table=11
NC_009009.1	RefSeq	gene	938578	940323	.	+	.	ID=gene923;Dbxref=GeneID:4805864;Name=SSA_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0929
NC_009009.1	RefSeq	CDS	938578	940323	.	+	0	ID=cds881;Parent=gene923;Dbxref=Genbank:YP_001034902.1,GeneID:4805864;Name=YP_001034902.1;Note=GC: 46.28%25%3B Transporter classification TC:3.A.1.21.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.78. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001034902.1;transl_table=11
NC_009009.1	RefSeq	gene	940421	941395	.	+	.	ID=gene924;Dbxref=GeneID:4806277;Name=SSA_0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0931
NC_009009.1	RefSeq	CDS	940421	941395	.	+	0	ID=cds882;Parent=gene924;Dbxref=Genbank:YP_001034903.1,GeneID:4806277;Name=YP_001034903.1;Note=GC: 36.82%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.77. SignalP prediction: Yes (prob. 0.515)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034903.1;transl_table=11
NC_009009.1	RefSeq	gene	941593	942864	.	+	.	ID=gene925;Dbxref=GeneID:4805779;Name=SSA_0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0932
NC_009009.1	RefSeq	CDS	941593	942864	.	+	0	ID=cds883;Parent=gene925;Dbxref=Genbank:YP_001034904.1,GeneID:4805779;Name=YP_001034904.1;Note=GC: 45.83%25%3B Codon Adaptation Index (CAI): 0.769. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034904.1;transl_table=11
NC_009009.1	RefSeq	gene	942874	943317	.	+	.	ID=gene926;Dbxref=GeneID:4806951;Name=SSA_0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0933
NC_009009.1	RefSeq	CDS	942874	943317	.	+	0	ID=cds884;Parent=gene926;Dbxref=Genbank:YP_001034905.1,GeneID:4806951;Name=YP_001034905.1;Note=GC: 39.64%25%3B Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten;gbkey=CDS;product=acetyltransferase;protein_id=YP_001034905.1;transl_table=11
NC_009009.1	RefSeq	gene	943348	944151	.	+	.	ID=gene927;Dbxref=GeneID:4807002;Name=SSA_0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0934
NC_009009.1	RefSeq	CDS	943348	944151	.	+	0	ID=cds885;Parent=gene927;Dbxref=Genbank:YP_001034906.1,GeneID:4807002;Name=YP_001034906.1;Note=GC: 39.93%25%3B Codon Adaptation Index (CAI): 0.764. Curator(s): T. Kitten;gbkey=CDS;product=HydD;protein_id=YP_001034906.1;transl_table=11
NC_009009.1	RefSeq	gene	944155	945033	.	+	.	ID=gene928;Dbxref=GeneID:4807127;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SSA_0935
NC_009009.1	RefSeq	CDS	944155	945033	.	+	0	ID=cds886;Parent=gene928;Dbxref=Genbank:YP_001034907.1,GeneID:4807127;Name=YP_001034907.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=YP_001034907.1;transl_table=11
NC_009009.1	RefSeq	gene	945279	946211	.	+	.	ID=gene929;Dbxref=GeneID:4807119;Name=mreA;gbkey=Gene;gene=mreA;gene_biotype=protein_coding;gene_synonym=ribC,ribF;locus_tag=SSA_0936
NC_009009.1	RefSeq	CDS	945279	946211	.	+	0	ID=cds887;Parent=gene929;Dbxref=Genbank:YP_001034908.1,GeneID:4807119;Name=YP_001034908.1;Note=catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities;gbkey=CDS;gene=mreA;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=YP_001034908.1;transl_table=11
NC_009009.1	RefSeq	gene	946323	946724	.	+	.	ID=gene930;Dbxref=GeneID:4807618;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;gene_synonym=yjbD;locus_tag=SSA_0937
NC_009009.1	RefSeq	CDS	946323	946724	.	+	0	ID=cds888;Parent=gene930;Dbxref=Genbank:YP_001034909.1,GeneID:4807618;Name=YP_001034909.1;Note=the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters%3B in Bacillus subtilis this protein is a substrate for ClpXP protease%3B blocks transcription of the competence regulatory gene encoded by the srf operon%3B regulates a number of genes involved in thiol homeostasis including trxA and trxB%3B monomeric member of ArsC family of proteins%3B does not bind DNA%3B contains a disulfide bond between C10 and C13 which may sense disulfide stress;gbkey=CDS;gene=spxA;product=Spx family transcriptional regulator;protein_id=YP_001034909.1;transl_table=11
NC_009009.1	RefSeq	gene	946727	947005	.	+	.	ID=gene931;Dbxref=GeneID:4807419;Name=SSA_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0938
NC_009009.1	RefSeq	CDS	946727	947005	.	+	0	ID=cds889;Parent=gene931;Dbxref=Genbank:YP_001034910.1,GeneID:4807419;Name=YP_001034910.1;Note=GC: 40.86%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034910.1;transl_table=11
NC_009009.1	RefSeq	gene	946950	947765	.	+	.	ID=gene932;Dbxref=GeneID:4806623;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=SSA_0939
NC_009009.1	RefSeq	CDS	946950	947765	.	+	0	ID=cds890;Parent=gene932;Dbxref=Genbank:YP_001034911.1,GeneID:4806623;Name=YP_001034911.1;Note=GC: 46.69%25%3B Codon Adaptation Index (CAI): 0.769. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=suhB;product=inositol monophosphatase;protein_id=YP_001034911.1;transl_table=11
NC_009009.1	RefSeq	gene	947766	949070	.	+	.	ID=gene933;Dbxref=GeneID:4807498;Name=SSA_0940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0940
NC_009009.1	RefSeq	CDS	947766	949070	.	+	0	ID=cds891;Parent=gene933;Dbxref=Genbank:YP_001034912.1,GeneID:4807498;Name=YP_001034912.1;Note=GC: 46.36%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): T. Kitten;gbkey=CDS;product=NOL1/NOP2/sun family protein;protein_id=YP_001034912.1;transl_table=11
NC_009009.1	RefSeq	gene	949201	950082	.	+	.	ID=gene934;Dbxref=GeneID:4805814;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=SSA_0941
NC_009009.1	RefSeq	CDS	949201	950082	.	+	0	ID=cds892;Parent=gene934;Dbxref=Genbank:YP_001034913.2,GeneID:4805814;Name=YP_001034913.2;Note=GC: 45.42%25%3B Transporter classification TC:3.A.1.7.1. Codon Adaptation Index (CAI): 0.781. Curator(s): T. Kitten;gbkey=CDS;gene=pstS;product=phosphate ABC transporter substrate-binding protein;protein_id=YP_001034913.2;transl_table=11
NC_009009.1	RefSeq	gene	950079	950996	.	+	.	ID=gene935;Dbxref=GeneID:4807086;Name=pstC1;gbkey=Gene;gene=pstC1;gene_biotype=protein_coding;locus_tag=SSA_0942
NC_009009.1	RefSeq	CDS	950079	950996	.	+	0	ID=cds893;Parent=gene935;Dbxref=Genbank:YP_001034914.1,GeneID:4807086;Name=YP_001034914.1;Note=GC: 44.44%25%3B Transporter classification TC:3.A.1.7.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.798. SignalP prediction: Yes (prob. 0.697)%3B Curator(s): T. Kitten;gbkey=CDS;gene=pstC1;product=phosphate ABC transporter transmembrane protein;protein_id=YP_001034914.1;transl_table=11
NC_009009.1	RefSeq	gene	950986	951870	.	+	.	ID=gene936;Dbxref=GeneID:4805961;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=SSA_0943
NC_009009.1	RefSeq	CDS	950986	951870	.	+	0	ID=cds894;Parent=gene936;Dbxref=Genbank:YP_001034915.1,GeneID:4805961;Name=YP_001034915.1;Note=GC: 46.33%25%3B Transporter classification TC:3.A.1.7.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten;gbkey=CDS;gene=pstC;product=phosphate ABC transporter permease;protein_id=YP_001034915.1;transl_table=11
NC_009009.1	RefSeq	gene	951881	952684	.	+	.	ID=gene937;Dbxref=GeneID:4806168;Name=pstB2;gbkey=Gene;gene=pstB2;gene_biotype=protein_coding;locus_tag=SSA_0944
NC_009009.1	RefSeq	CDS	951881	952684	.	+	0	ID=cds895;Parent=gene937;Dbxref=Genbank:YP_001034916.1,GeneID:4806168;Name=YP_001034916.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB2;product=phosphate ABC transporter ATP-binding protein;protein_id=YP_001034916.1;transl_table=11
NC_009009.1	RefSeq	gene	952745	953518	.	+	.	ID=gene938;Dbxref=GeneID:4807095;Name=pstB1;gbkey=Gene;gene=pstB1;gene_biotype=protein_coding;locus_tag=SSA_0945
NC_009009.1	RefSeq	CDS	952745	953518	.	+	0	ID=cds896;Parent=gene938;Dbxref=Genbank:YP_001034917.1,GeneID:4807095;Name=YP_001034917.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB1;product=phosphate transporter ATP-binding protein;protein_id=YP_001034917.1;transl_table=11
NC_009009.1	RefSeq	gene	953533	954186	.	+	.	ID=gene939;Dbxref=GeneID:4807371;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=SSA_0946
NC_009009.1	RefSeq	CDS	953533	954186	.	+	0	ID=cds897;Parent=gene939;Dbxref=Genbank:YP_001034918.1,GeneID:4807371;Name=YP_001034918.1;Note=GC: 43.73%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): T. Kitten;gbkey=CDS;gene=phoU;product=phosphate transporter PhoU;protein_id=YP_001034918.1;transl_table=11
NC_009009.1	RefSeq	gene	954343	954936	.	+	.	ID=gene940;Dbxref=GeneID:4807597;Name=SSA_0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0947
NC_009009.1	RefSeq	CDS	954343	954936	.	+	0	ID=cds898;Parent=gene940;Dbxref=Genbank:YP_001034919.1,GeneID:4807597;Name=YP_001034919.1;Note=GC: 33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.645)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034919.1;transl_table=11
NC_009009.1	RefSeq	gene	955095	955688	.	+	.	ID=gene941;Dbxref=GeneID:4806038;Name=SSA_0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0948
NC_009009.1	RefSeq	CDS	955095	955688	.	+	0	ID=cds899;Parent=gene941;Dbxref=Genbank:YP_001034920.1,GeneID:4806038;Name=YP_001034920.1;Note=GC: 33.5%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034920.1;transl_table=11
NC_009009.1	RefSeq	gene	955847	956455	.	+	.	ID=gene942;Dbxref=GeneID:4806206;Name=SSA_0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0949
NC_009009.1	RefSeq	CDS	955847	956455	.	+	0	ID=cds900;Parent=gene942;Dbxref=Genbank:YP_001034921.1,GeneID:4806206;Name=YP_001034921.1;Note=GC: 31.36%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.798. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034921.1;transl_table=11
NC_009009.1	RefSeq	gene	956442	957848	.	+	.	ID=gene943;Dbxref=GeneID:4806374;Name=SSA_0950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0950
NC_009009.1	RefSeq	CDS	956442	957848	.	+	0	ID=cds901;Parent=gene943;Dbxref=Genbank:YP_001034922.1,GeneID:4806374;Name=YP_001034922.1;Note=GC: 37.81%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034922.1;transl_table=11
NC_009009.1	RefSeq	gene	957859	958155	.	+	.	ID=gene944;Dbxref=GeneID:4805967;Name=SSA_0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0952
NC_009009.1	RefSeq	CDS	957859	958155	.	+	0	ID=cds902;Parent=gene944;Dbxref=Genbank:YP_001034923.1,GeneID:4805967;Name=YP_001034923.1;Note=GC: 42.76%25%3B Codon Adaptation Index (CAI): 0.769. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034923.1;transl_table=11
NC_009009.1	RefSeq	gene	958164	958490	.	+	.	ID=gene945;Dbxref=GeneID:4805861;Name=SSA_0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0954
NC_009009.1	RefSeq	CDS	958164	958490	.	+	0	ID=cds903;Parent=gene945;Dbxref=Genbank:YP_001034924.1,GeneID:4805861;Name=YP_001034924.1;Note=GC: 32.72%25%3B Codon Adaptation Index (CAI): 0.767. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034924.1;transl_table=11
NC_009009.1	RefSeq	gene	958659	961199	.	+	.	ID=gene946;Dbxref=GeneID:4806689;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SSA_0955
NC_009009.1	RefSeq	CDS	958659	961199	.	+	0	ID=cds904;Parent=gene946;Dbxref=Genbank:YP_001034925.1,GeneID:4806689;Name=YP_001034925.1;Note=GC: 45.38%25%3B Codon Adaptation Index (CAI): 0.804. Curator(s): T. Kitten;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=YP_001034925.1;transl_table=11
NC_009009.1	RefSeq	gene	961363	965478	.	+	.	ID=gene947;Dbxref=GeneID:4807728;Name=sspD;gbkey=Gene;gene=sspD;gene_biotype=protein_coding;locus_tag=SSA_0956
NC_009009.1	RefSeq	CDS	961363	965478	.	+	0	ID=cds905;Parent=gene947;Dbxref=Genbank:YP_001034926.1,GeneID:4807728;Name=YP_001034926.1;Note=GC: 45.02%25%3B Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=sspD;product=surface protein D;protein_id=YP_001034926.1;transl_table=11
NC_009009.1	RefSeq	gene	966416	967231	.	+	.	ID=gene948;Dbxref=GeneID:4805937;Name=SSA_0957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0957
NC_009009.1	RefSeq	CDS	966416	967231	.	+	0	ID=cds906;Parent=gene948;Dbxref=Genbank:YP_001034927.1,GeneID:4805937;Name=YP_001034927.1;Note=GC: 37.62%25%3B Codon Adaptation Index (CAI): 0.74. Dehydrogenases with different specificities%2C related to short-chain alcohol dehydrogenases. Curator(s): T. Kitten;gbkey=CDS;product=dehydrogenase;protein_id=YP_001034927.1;transl_table=11
NC_009009.1	RefSeq	gene	967413	967877	.	+	.	ID=gene949;Dbxref=GeneID:4808071;Name=SSA_0958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0958
NC_009009.1	RefSeq	CDS	967413	967877	.	+	0	ID=cds907;Parent=gene949;Dbxref=Genbank:YP_001034928.1,GeneID:4808071;Name=YP_001034928.1;Note=GC: 47.53%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034928.1;transl_table=11
NC_009009.1	RefSeq	gene	967982	968656	.	+	.	ID=gene950;Dbxref=GeneID:4805951;Name=ciaR;gbkey=Gene;gene=ciaR;gene_biotype=protein_coding;locus_tag=SSA_0959
NC_009009.1	RefSeq	CDS	967982	968656	.	+	0	ID=cds908;Parent=gene950;Dbxref=Genbank:YP_001034929.1,GeneID:4805951;Name=YP_001034929.1;Note=GC: 40.59%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=ciaR;product=two-component response transcriptional regulator;protein_id=YP_001034929.1;transl_table=11
NC_009009.1	RefSeq	gene	968646	970037	.	+	.	ID=gene951;Dbxref=GeneID:4806483;Name=ciaH;gbkey=Gene;gene=ciaH;gene_biotype=protein_coding;locus_tag=SSA_0960
NC_009009.1	RefSeq	CDS	968646	970037	.	+	0	ID=cds909;Parent=gene951;Dbxref=Genbank:YP_001034930.1,GeneID:4806483;Name=YP_001034930.1;Note=GC: 41.74%25%3B Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten;gbkey=CDS;gene=ciaH;product=sensor protein ciaH;protein_id=YP_001034930.1;transl_table=11
NC_009009.1	RefSeq	gene	970053	970991	.	+	.	ID=gene952;Dbxref=GeneID:4806043;Name=SSA_0961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0961
NC_009009.1	RefSeq	CDS	970053	970991	.	+	0	ID=cds910;Parent=gene952;Dbxref=Genbank:YP_001034931.1,GeneID:4806043;Name=YP_001034931.1;Note=GC: 39.3%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten;gbkey=CDS;product=ketopantoate reductase PanE/ApbA;protein_id=YP_001034931.1;transl_table=11
NC_009009.1	RefSeq	gene	971105	971491	.	+	.	ID=gene953;Dbxref=GeneID:4806518;Name=lguL;gbkey=Gene;gene=lguL;gene_biotype=protein_coding;locus_tag=SSA_0962
NC_009009.1	RefSeq	CDS	971105	971491	.	+	0	ID=cds911;Parent=gene953;Dbxref=Genbank:YP_001034932.1,GeneID:4806518;Name=YP_001034932.1;Note=GC: 43.67%25%3B Codon Adaptation Index (CAI): 0.829. Curator(s): T. Kitten;gbkey=CDS;gene=lguL;product=lactoylglutathione lyase;protein_id=YP_001034932.1;transl_table=11
NC_009009.1	RefSeq	gene	971553	972950	.	+	.	ID=gene954;Dbxref=GeneID:4807561;Name=SSA_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0963
NC_009009.1	RefSeq	CDS	971553	972950	.	+	0	ID=cds912;Parent=gene954;Dbxref=Genbank:YP_001034933.1,GeneID:4807561;Name=YP_001034933.1;Note=GC: 45.35%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten;gbkey=CDS;product=peptidoglycan N-acetylglucosamine deacetylase A;protein_id=YP_001034933.1;transl_table=11
NC_009009.1	RefSeq	gene	973044	974204	.	-	.	ID=gene955;Dbxref=GeneID:4807540;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=SSA_0964
NC_009009.1	RefSeq	CDS	973044	974204	.	-	0	ID=cds913;Parent=gene955;Dbxref=Genbank:YP_001034934.1,GeneID:4807540;Name=YP_001034934.1;Note=GC: 44.96%25%3B Codon Adaptation Index (CAI): 0.787. Curator(s): T. Kitten;gbkey=CDS;gene=deaD;product=DEAD/DEAH box helicase;protein_id=YP_001034934.1;transl_table=11
NC_009009.1	RefSeq	gene	974125	975135	.	-	.	ID=gene956;Dbxref=GeneID:4807507;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=SSA_0965
NC_009009.1	RefSeq	CDS	974125	975135	.	-	0	ID=cds914;Parent=gene956;Dbxref=Genbank:YP_001034935.1,GeneID:4807507;Name=YP_001034935.1;Note=GC: 46.88%25%3B Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 0.815)%3B Curator(s): T. Kitten;gbkey=CDS;gene=mocA;product=oxidoreductase;protein_id=YP_001034935.1;transl_table=11
NC_009009.1	RefSeq	gene	975203	975850	.	+	.	ID=gene957;Dbxref=GeneID:4806197;Name=udK;gbkey=Gene;gene=udK;gene_biotype=protein_coding;locus_tag=SSA_0966
NC_009009.1	RefSeq	CDS	975203	975850	.	+	0	ID=cds915;Parent=gene957;Dbxref=Genbank:YP_001034936.1,GeneID:4806197;Name=YP_001034936.1;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;gbkey=CDS;gene=udK;product=uridine kinase;protein_id=YP_001034936.1;transl_table=11
NC_009009.1	RefSeq	gene	976012	976680	.	+	.	ID=gene958;Dbxref=GeneID:4807592;Name=SSA_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0967
NC_009009.1	RefSeq	CDS	976012	976680	.	+	0	ID=cds916;Parent=gene958;Dbxref=Genbank:YP_001034937.1,GeneID:4807592;Name=YP_001034937.1;Note=GC: 43.8%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.746. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.7)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034937.1;transl_table=11
NC_009009.1	RefSeq	gene	976839	977201	.	+	.	ID=gene959;Dbxref=GeneID:4806414;Name=SSA_0968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0968
NC_009009.1	RefSeq	CDS	976839	977201	.	+	0	ID=cds917;Parent=gene959;Dbxref=Genbank:YP_001034938.1,GeneID:4806414;Name=YP_001034938.1;Note=GC: 36.36%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034938.1;transl_table=11
NC_009009.1	RefSeq	gene	977352	977789	.	+	.	ID=gene960;Dbxref=GeneID:4806013;Name=SSA_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0969
NC_009009.1	RefSeq	CDS	977352	977789	.	+	0	ID=cds918;Parent=gene960;Dbxref=Genbank:YP_001034939.1,GeneID:4806013;Name=YP_001034939.1;Note=GC: 35.16%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.736. SignalP prediction: Yes (prob. 0.892)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034939.1;transl_table=11
NC_009009.1	RefSeq	gene	977930	978388	.	+	.	ID=gene961;Dbxref=GeneID:4806181;Name=SSA_0970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0970
NC_009009.1	RefSeq	CDS	977930	978388	.	+	0	ID=cds919;Parent=gene961;Dbxref=Genbank:YP_001034940.1,GeneID:4806181;Name=YP_001034940.1;Note=GC: 35.29%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.802. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.892)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034940.1;transl_table=11
NC_009009.1	RefSeq	gene	978381	980129	.	+	.	ID=gene962;Dbxref=GeneID:4807530;Name=SSA_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0971
NC_009009.1	RefSeq	CDS	978381	980129	.	+	0	ID=cds920;Parent=gene962;Dbxref=Genbank:YP_001034941.1,GeneID:4807530;Name=YP_001034941.1;Note=GC: 38.99%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034941.1;transl_table=11
NC_009009.1	RefSeq	gene	980113	980424	.	+	.	ID=gene963;Dbxref=GeneID:4806302;Name=SSA_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0972
NC_009009.1	RefSeq	CDS	980113	980424	.	+	0	ID=cds921;Parent=gene963;Dbxref=Genbank:YP_001034942.1,GeneID:4806302;Name=YP_001034942.1;Note=GC: 43.91%25%3B Codon Adaptation Index (CAI): 0.747. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034942.1;transl_table=11
NC_009009.1	RefSeq	gene	980436	980747	.	+	.	ID=gene964;Dbxref=GeneID:4806532;Name=SSA_0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0973
NC_009009.1	RefSeq	CDS	980436	980747	.	+	0	ID=cds922;Parent=gene964;Dbxref=Genbank:YP_001034943.1,GeneID:4806532;Name=YP_001034943.1;Note=GC: 39.1%25%3B Codon Adaptation Index (CAI): 0.757. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034943.1;transl_table=11
NC_009009.1	RefSeq	gene	981111	982829	.	+	.	ID=gene965;Dbxref=GeneID:4806399;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=SSA_0975
NC_009009.1	RefSeq	CDS	981111	982829	.	+	0	ID=cds923;Parent=gene965;Dbxref=Genbank:YP_001034944.1,GeneID:4806399;Name=YP_001034944.1;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=YP_001034944.1;transl_table=11
NC_009009.1	RefSeq	gene	982842	983879	.	+	.	ID=gene966;Dbxref=GeneID:4806851;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=SSA_0977
NC_009009.1	RefSeq	CDS	982842	983879	.	+	0	ID=cds924;Parent=gene966;Dbxref=Genbank:YP_001034945.2,GeneID:4806851;Name=YP_001034945.2;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=YP_001034945.2;transl_table=11
NC_009009.1	RefSeq	gene	983876	984142	.	+	.	ID=gene967;Dbxref=GeneID:4807729;Name=SSA_0978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0978
NC_009009.1	RefSeq	CDS	983876	984142	.	+	0	ID=cds925;Parent=gene967;Dbxref=Genbank:YP_001034946.1,GeneID:4807729;Name=YP_001034946.1;Note=GC: 43.45%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.724. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034946.1;transl_table=11
NC_009009.1	RefSeq	gene	984144	985526	.	+	.	ID=gene968;Dbxref=GeneID:4807493;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=SSA_0980
NC_009009.1	RefSeq	CDS	984144	985526	.	+	0	ID=cds926;Parent=gene968;Dbxref=Genbank:YP_001034947.1,GeneID:4807493;Name=YP_001034947.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;gene=leuC;product=isopropylmalate isomerase large subunit;protein_id=YP_001034947.1;transl_table=11
NC_009009.1	RefSeq	gene	985536	986126	.	+	.	ID=gene969;Dbxref=GeneID:4806328;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SSA_0981
NC_009009.1	RefSeq	CDS	985536	986126	.	+	0	ID=cds927;Parent=gene969;Dbxref=Genbank:YP_001034948.1,GeneID:4806328;Name=YP_001034948.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=isopropylmalate isomerase small subunit;protein_id=YP_001034948.1;transl_table=11
NC_009009.1	RefSeq	gene	986226	987005	.	+	.	ID=gene970;Dbxref=GeneID:4807014;Name=SSA_0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0983
NC_009009.1	RefSeq	CDS	986226	987005	.	+	0	ID=cds928;Parent=gene970;Dbxref=Genbank:YP_001034949.1,GeneID:4807014;Name=YP_001034949.1;Note=GC: 46.92%25%3B Codon Adaptation Index (CAI): 0.835. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034949.1;transl_table=11
NC_009009.1	RefSeq	gene	987194	987631	.	+	.	ID=gene971;Dbxref=GeneID:4806731;Name=SSA_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0984
NC_009009.1	RefSeq	CDS	987194	987631	.	+	0	ID=cds929;Parent=gene971;Dbxref=Genbank:YP_001034950.1,GeneID:4806731;Name=YP_001034950.1;Note=GC: 41.32%25%3B Codon Adaptation Index (CAI): 0.825. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;product=SlyA-like protein;protein_id=YP_001034950.1;transl_table=11
NC_009009.1	RefSeq	gene	987635	988399	.	+	.	ID=gene972;Dbxref=GeneID:4807082;Name=SSA_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0985
NC_009009.1	RefSeq	CDS	987635	988399	.	+	0	ID=cds930;Parent=gene972;Dbxref=Genbank:YP_001034951.1,GeneID:4807082;Name=YP_001034951.1;Note=GC: 43.79%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034951.1;transl_table=11
NC_009009.1	RefSeq	gene	988413	989141	.	+	.	ID=gene973;Dbxref=GeneID:4807339;Name=SSA_0986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0986
NC_009009.1	RefSeq	CDS	988413	989141	.	+	0	ID=cds931;Parent=gene973;Dbxref=Genbank:YP_001034952.1,GeneID:4807339;Name=YP_001034952.1;Note=GC: 46.5%25%3B Transporter classification TC:3.A.1.12.3. Codon Adaptation Index (CAI): 0.767. Curator(s): T. Kitten;gbkey=CDS;product=choline transporter;protein_id=YP_001034952.1;transl_table=11
NC_009009.1	RefSeq	gene	989134	990654	.	+	.	ID=gene974;Dbxref=GeneID:4807271;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=SSA_0987
NC_009009.1	RefSeq	CDS	989134	990654	.	+	0	ID=cds932;Parent=gene974;Dbxref=Genbank:YP_001034953.1,GeneID:4807271;Name=YP_001034953.1;Note=GC: 43.98%25%3B Transporter classification TC:3.A.1.12.4. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.771. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten;gbkey=CDS;gene=proW;product=choline ABC transporter permease;protein_id=YP_001034953.1;transl_table=11
NC_009009.1	RefSeq	gene	990802	991119	.	+	.	ID=gene975;Dbxref=GeneID:4806976;Name=SSA_0988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0988
NC_009009.1	RefSeq	CDS	990802	991119	.	+	0	ID=cds933;Parent=gene975;Dbxref=Genbank:YP_001034954.1,GeneID:4806976;Name=YP_001034954.1;Note=GC: 40.25%25%3B Codon Adaptation Index (CAI): 0.821. Curator(s): T. Kitten;gbkey=CDS;product=TfoX domain-containing protein;protein_id=YP_001034954.1;transl_table=11
NC_009009.1	RefSeq	gene	991211	991876	.	+	.	ID=gene976;Dbxref=GeneID:4806870;Name=SSA_0989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0989
NC_009009.1	RefSeq	CDS	991211	991876	.	+	0	ID=cds934;Parent=gene976;Dbxref=Genbank:YP_001034955.1,GeneID:4806870;Name=YP_001034955.1;Note=GC: 47.75%25%3B Codon Adaptation Index (CAI): 0.748. Helix-turn-helix prediction: LysR\AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=transcriptional regulator;protein_id=YP_001034955.1;transl_table=11
NC_009009.1	RefSeq	gene	991873	992610	.	+	.	ID=gene977;Dbxref=GeneID:4806892;Name=SSA_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0990
NC_009009.1	RefSeq	CDS	991873	992610	.	+	0	ID=cds935;Parent=gene977;Dbxref=Genbank:YP_001034956.1,GeneID:4806892;Name=YP_001034956.1;Note=GC: 41.33%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034956.1;transl_table=11
NC_009009.1	RefSeq	gene	992671	993432	.	-	.	ID=gene978;Dbxref=GeneID:4808111;Name=SSA_0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0991
NC_009009.1	RefSeq	CDS	992671	993432	.	-	0	ID=cds936;Parent=gene978;Dbxref=Genbank:YP_001034957.1,GeneID:4808111;Name=YP_001034957.1;Note=GC: 46.85%25%3B Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten;gbkey=CDS;product=deoxyribonuclease;protein_id=YP_001034957.1;transl_table=11
NC_009009.1	RefSeq	gene	993626	994207	.	+	.	ID=gene979;Dbxref=GeneID:4808110;Name=SSA_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0992
NC_009009.1	RefSeq	CDS	993626	994207	.	+	0	ID=cds937;Parent=gene979;Dbxref=Genbank:YP_001034958.1,GeneID:4808110;Name=YP_001034958.1;Note=GC: 43.47%25%3B Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034958.1;transl_table=11
NC_009009.1	RefSeq	gene	994204	994818	.	+	.	ID=gene980;Dbxref=GeneID:4807291;Name=SSA_0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0993
NC_009009.1	RefSeq	CDS	994204	994818	.	+	0	ID=cds938;Parent=gene980;Dbxref=Genbank:YP_001034959.1,GeneID:4807291;Name=YP_001034959.1;Note=GC: 36.26%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034959.1;transl_table=11
NC_009009.1	RefSeq	gene	994830	995450	.	+	.	ID=gene981;Dbxref=GeneID:4807887;Name=SSA_0994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0994
NC_009009.1	RefSeq	CDS	994830	995450	.	+	0	ID=cds939;Parent=gene981;Dbxref=Genbank:YP_001034960.1,GeneID:4807887;Name=YP_001034960.1;Note=GC: 41.55%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten;gbkey=CDS;product=peptidase E;protein_id=YP_001034960.1;transl_table=11
NC_009009.1	RefSeq	gene	995856	996392	.	+	.	ID=gene982;Dbxref=GeneID:4807350;Name=SSA_0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0995
NC_009009.1	RefSeq	CDS	995856	996392	.	+	0	ID=cds940;Parent=gene982;Dbxref=Genbank:YP_001034961.1,GeneID:4807350;Name=YP_001034961.1;Note=GC: 36.31%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): T. Kitten;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_001034961.1;transl_table=11
NC_009009.1	RefSeq	gene	996422	996919	.	+	.	ID=gene983;Dbxref=GeneID:4807783;Name=SSA_0996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0996
NC_009009.1	RefSeq	CDS	996422	996919	.	+	0	ID=cds941;Parent=gene983;Dbxref=Genbank:YP_001034962.1,GeneID:4807783;Name=YP_001034962.1;Note=GC: 43.37%25%3B Codon Adaptation Index (CAI): 0.808. Contains GAF domain%2C involved in signal transduction. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=cGMP-specific phosphodiesterase;protein_id=YP_001034962.1;transl_table=11
NC_009009.1	RefSeq	gene	996919	998589	.	+	.	ID=gene984;Dbxref=GeneID:4806286;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=SSA_0997
NC_009009.1	RefSeq	CDS	996919	998589	.	+	0	ID=cds942;Parent=gene984;Dbxref=Genbank:YP_001034963.1,GeneID:4806286;Name=YP_001034963.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;gene=dnaX;product=DNA polymerase III subunits gamma and tau;protein_id=YP_001034963.1;transl_table=11
NC_009009.1	RefSeq	gene	998627	998818	.	+	.	ID=gene985;Dbxref=GeneID:4806307;Name=SSA_0998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_0998
NC_009009.1	RefSeq	CDS	998627	998818	.	+	0	ID=cds943;Parent=gene985;Dbxref=Genbank:YP_001034964.1,GeneID:4806307;Name=YP_001034964.1;Note=GC: 41.15%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034964.1;transl_table=11
NC_009009.1	RefSeq	gene	998871	999806	.	-	.	ID=gene986;Dbxref=GeneID:4807153;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=SSA_0999
NC_009009.1	RefSeq	CDS	998871	999806	.	-	0	ID=cds944;Parent=gene986;Dbxref=Genbank:YP_001034965.1,GeneID:4807153;Name=YP_001034965.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;gene=birA;product=biotin--protein ligase;protein_id=YP_001034965.1;transl_table=11
NC_009009.1	RefSeq	gene	999823	1000824	.	-	.	ID=gene987;Dbxref=GeneID:4806758;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=SSA_1000
NC_009009.1	RefSeq	CDS	999823	1000824	.	-	0	ID=cds945;Parent=gene987;Dbxref=Genbank:YP_001034966.1,GeneID:4806758;Name=YP_001034966.1;Note=GC: 47.31%25%3B Codon Adaptation Index (CAI): 0.757. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=galR;product=LacI family transcriptional repressor;protein_id=YP_001034966.1;transl_table=11
NC_009009.1	RefSeq	gene	1000907	1001779	.	-	.	ID=gene988;Dbxref=GeneID:4805989;Name=msmR;gbkey=Gene;gene=msmR;gene_biotype=protein_coding;locus_tag=SSA_1001
NC_009009.1	RefSeq	CDS	1000907	1001779	.	-	0	ID=cds946;Parent=gene988;Dbxref=Genbank:YP_001034967.1,GeneID:4805989;Name=YP_001034967.1;Note=GC: 41.01%25%3B Codon Adaptation Index (CAI): 0.746. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=msmR;product=arabinose (multiple sugar metabolism) operon transcriptional regulator;protein_id=YP_001034967.1;transl_table=11
NC_009009.1	RefSeq	gene	1001840	1004002	.	+	.	ID=gene989;Dbxref=GeneID:4806132;Name=SSA_1002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1002
NC_009009.1	RefSeq	CDS	1001840	1004002	.	+	0	ID=cds947;Parent=gene989;Dbxref=Genbank:YP_001034968.1,GeneID:4806132;Name=YP_001034968.1;Note=GC: 42.39%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=alpha-galactosidase;protein_id=YP_001034968.1;transl_table=11
NC_009009.1	RefSeq	gene	1004015	1005274	.	+	.	ID=gene990;Dbxref=GeneID:4806236;Name=SSA_1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1003
NC_009009.1	RefSeq	CDS	1004015	1005274	.	+	0	ID=cds948;Parent=gene990;Dbxref=Genbank:YP_001034969.1,GeneID:4806236;Name=YP_001034969.1;Note=GC: 42.54%25%3B Transporter classification TC:3.A.1.1.2. Codon Adaptation Index (CAI): 0.784. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=YP_001034969.1;transl_table=11
NC_009009.1	RefSeq	gene	1005288	1006154	.	+	.	ID=gene991;Dbxref=GeneID:4806608;Name=msmF;gbkey=Gene;gene=msmF;gene_biotype=protein_coding;locus_tag=SSA_1004
NC_009009.1	RefSeq	CDS	1005288	1006154	.	+	0	ID=cds949;Parent=gene991;Dbxref=Genbank:YP_001034970.1,GeneID:4806608;Name=YP_001034970.1;Note=GC: 41.98%25%3B Transporter classification TC:3.A.1.1.2. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.743. SignalP prediction: Yes (prob. 0.537).;gbkey=CDS;gene=msmF;product=sugar ABC transporter permease;protein_id=YP_001034970.1;transl_table=11
NC_009009.1	RefSeq	gene	1006168	1007001	.	+	.	ID=gene992;Dbxref=GeneID:4806142;Name=msmG;gbkey=Gene;gene=msmG;gene_biotype=protein_coding;locus_tag=SSA_1005
NC_009009.1	RefSeq	CDS	1006168	1007001	.	+	0	ID=cds950;Parent=gene992;Dbxref=Genbank:YP_001034971.1,GeneID:4806142;Name=YP_001034971.1;Note=GC: 37.65%25%3B Transporter classification TC:3.A.1.1.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.929).;gbkey=CDS;gene=msmG;product=sugar ABC transporter permease;protein_id=YP_001034971.1;transl_table=11
NC_009009.1	RefSeq	gene	1007216	1008661	.	+	.	ID=gene993;Dbxref=GeneID:4807727;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=SSA_1006
NC_009009.1	RefSeq	CDS	1007216	1008661	.	+	0	ID=cds951;Parent=gene993;Dbxref=Genbank:YP_001034972.1,GeneID:4807727;Name=YP_001034972.1;Note=GC: 41.84%25%3B Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;gene=gtfA;product=dextransucrase;protein_id=YP_001034972.1;transl_table=11
NC_009009.1	RefSeq	gene	1008683	1009819	.	+	.	ID=gene994;Dbxref=GeneID:4806472;Name=SSA_1007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1007
NC_009009.1	RefSeq	CDS	1008683	1009819	.	+	0	ID=cds952;Parent=gene994;Dbxref=Genbank:YP_001034973.1,GeneID:4806472;Name=YP_001034973.1;Note=GC: 46%25%3B Transporter classification TC:3.A.1.1.2. Codon Adaptation Index (CAI): 0.775. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_001034973.1;transl_table=11
NC_009009.1	RefSeq	gene	1009996	1011174	.	+	.	ID=gene995;Dbxref=GeneID:4806799;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=SSA_1008
NC_009009.1	RefSeq	CDS	1009996	1011174	.	+	0	ID=cds953;Parent=gene995;Dbxref=Genbank:YP_001034974.1,GeneID:4806799;Name=YP_001034974.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;gene=galK;product=galactokinase;protein_id=YP_001034974.1;transl_table=11
NC_009009.1	RefSeq	gene	1011394	1012875	.	+	.	ID=gene996;Dbxref=GeneID:4806276;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=SSA_1009
NC_009009.1	RefSeq	CDS	1011394	1012875	.	+	0	ID=cds954;Parent=gene996;Dbxref=Genbank:YP_001034975.1,GeneID:4806276;Name=YP_001034975.1;Note=catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=YP_001034975.1;transl_table=11
NC_009009.1	RefSeq	gene	1012879	1013922	.	+	.	ID=gene997;Dbxref=GeneID:4806693;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=SSA_1010
NC_009009.1	RefSeq	CDS	1012879	1013922	.	+	0	ID=cds955;Parent=gene997;Dbxref=Genbank:YP_001034976.1,GeneID:4806693;Name=YP_001034976.1;Note=GC: 47.8%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;gene=galE;product=UDP-glucose 4-epimerase;protein_id=YP_001034976.1;transl_table=11
NC_009009.1	RefSeq	gene	1014274	1014864	.	+	.	ID=gene998;Dbxref=GeneID:4805873;Name=SSA_1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1011
NC_009009.1	RefSeq	CDS	1014274	1014864	.	+	0	ID=cds956;Parent=gene998;Dbxref=Genbank:YP_001034977.1,GeneID:4805873;Name=YP_001034977.1;Note=GC: 46.7%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.747. SignalP prediction: Yes (prob. 0.457).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034977.1;transl_table=11
NC_009009.1	RefSeq	gene	1014879	1017374	.	+	.	ID=gene999;Dbxref=GeneID:4806223;Name=SSA_1012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1012
NC_009009.1	RefSeq	CDS	1014879	1017374	.	+	0	ID=cds957;Parent=gene999;Dbxref=Genbank:YP_001034978.1,GeneID:4806223;Name=YP_001034978.1;Note=GC: 47.2%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=YP_001034978.1;transl_table=11
NC_009009.1	RefSeq	gene	1017361	1017993	.	+	.	ID=gene1000;Dbxref=GeneID:4805892;Name=SSA_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1013
NC_009009.1	RefSeq	CDS	1017361	1017993	.	+	0	ID=cds958;Parent=gene1000;Dbxref=Genbank:YP_001034979.1,GeneID:4805892;Name=YP_001034979.1;Note=GC: 49.13%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=phosphatidylserine synthase;protein_id=YP_001034979.1;transl_table=11
NC_009009.1	RefSeq	gene	1017986	1018858	.	+	.	ID=gene1001;Dbxref=GeneID:4805818;Name=SSA_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1014
NC_009009.1	RefSeq	CDS	1017986	1018858	.	+	0	ID=cds959;Parent=gene1001;Dbxref=Genbank:YP_001034980.1,GeneID:4805818;Name=YP_001034980.1;Note=GC: 46.85%25%3B Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;product=phosphatidylserine decarboxylase;protein_id=YP_001034980.1;transl_table=11
NC_009009.1	RefSeq	gene	1018843	1019742	.	+	.	ID=gene1002;Dbxref=GeneID:4807585;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=SSA_1015
NC_009009.1	RefSeq	CDS	1018843	1019742	.	+	0	ID=cds960;Parent=gene1002;Dbxref=Genbank:YP_001034981.1,GeneID:4807585;Name=YP_001034981.1;Note=UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones%2C hemes%2C chlorophylls%2C vitamin E%2C and shikonin;gbkey=CDS;gene=ubiA;product=prenyltransferase;protein_id=YP_001034981.1;transl_table=11
NC_009009.1	RefSeq	gene	1019742	1022225	.	+	.	ID=gene1003;Dbxref=GeneID:4805895;Name=SSA_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1016
NC_009009.1	RefSeq	CDS	1019742	1022225	.	+	0	ID=cds961;Parent=gene1003;Dbxref=Genbank:YP_001034982.1,GeneID:4805895;Name=YP_001034982.1;Note=GC: 48.35%25%3B Codon Adaptation Index (CAI): 0.78.;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=YP_001034982.1;transl_table=11
NC_009009.1	RefSeq	gene	1022212	1023279	.	+	.	ID=gene1004;Dbxref=GeneID:4805985;Name=SSA_1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1017
NC_009009.1	RefSeq	CDS	1022212	1023279	.	+	0	ID=cds962;Parent=gene1004;Dbxref=Genbank:YP_001034983.1,GeneID:4805985;Name=YP_001034983.1;Note=GC: 44.29%25%3B Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034983.1;transl_table=11
NC_009009.1	RefSeq	gene	1023486	1032629	.	+	.	ID=gene1005;Dbxref=GeneID:4807581;Name=SSA_1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1018
NC_009009.1	RefSeq	CDS	1023486	1032629	.	+	0	ID=cds963;Parent=gene1005;Dbxref=Genbank:YP_001034984.1,GeneID:4807581;Name=YP_001034984.1;Note=GC: 45.25%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.781. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=Zinc metalloprotease zmpC;protein_id=YP_001034984.1;transl_table=11
NC_009009.1	RefSeq	gene	1033017	1035437	.	+	.	ID=gene1006;Dbxref=GeneID:4807846;Name=SSA_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1019
NC_009009.1	RefSeq	CDS	1033017	1035437	.	+	0	ID=cds964;Parent=gene1006;Dbxref=Genbank:YP_001034985.1,GeneID:4807846;Name=YP_001034985.1;Note=GC: 42.42%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.8. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=collagen-binding surface protein;protein_id=YP_001034985.1;transl_table=11
NC_009009.1	RefSeq	gene	1035697	1036164	.	+	.	ID=gene1007;Dbxref=GeneID:4807867;Name=SSA_1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1020
NC_009009.1	RefSeq	CDS	1035697	1036164	.	+	0	ID=cds965;Parent=gene1007;Dbxref=Genbank:YP_001034986.1,GeneID:4807867;Name=YP_001034986.1;Note=GC: 37.39%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034986.1;transl_table=11
NC_009009.1	RefSeq	gene	1036284	1037330	.	+	.	ID=gene1008;Dbxref=GeneID:4807414;Name=SSA_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1021
NC_009009.1	RefSeq	CDS	1036284	1037330	.	+	0	ID=cds966;Parent=gene1008;Dbxref=Genbank:YP_001034987.1,GeneID:4807414;Name=YP_001034987.1;Note=GC: 47.18%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034987.1;transl_table=11
NC_009009.1	RefSeq	gene	1037423	1038538	.	+	.	ID=gene1009;Dbxref=GeneID:4807993;Name=SSA_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1022
NC_009009.1	RefSeq	CDS	1037423	1038538	.	+	0	ID=cds967;Parent=gene1009;Dbxref=Genbank:YP_001034988.1,GeneID:4807993;Name=YP_001034988.1;Note=GC: 41.94%25%3B Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=group 1 glycosyl transferase;protein_id=YP_001034988.1;transl_table=11
NC_009009.1	RefSeq	gene	1038551	1041226	.	+	.	ID=gene1010;Dbxref=GeneID:4807480;Name=SSA_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1023
NC_009009.1	RefSeq	CDS	1038551	1041226	.	+	0	ID=cds968;Parent=gene1010;Dbxref=Genbank:YP_001034989.1,GeneID:4807480;Name=YP_001034989.1;Note=GC: 40.21%25%3B Codon Adaptation Index (CAI): 0.768. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=von Willebrand factor A;protein_id=YP_001034989.1;transl_table=11
NC_009009.1	RefSeq	gene	1041272	1042738	.	-	.	ID=gene1011;Dbxref=GeneID:4806539;Name=amy;gbkey=Gene;gene=amy;gene_biotype=protein_coding;locus_tag=SSA_1024
NC_009009.1	RefSeq	CDS	1041272	1042738	.	-	0	ID=cds969;Parent=gene1011;Dbxref=Genbank:YP_001034990.1,GeneID:4806539;Name=YP_001034990.1;Note=converts 1%2C4-alpha-D-glucans to maltodextrin;gbkey=CDS;gene=amy;product=alpha-amylase;protein_id=YP_001034990.1;transl_table=11
NC_009009.1	RefSeq	gene	1042934	1043677	.	+	.	ID=gene1012;Dbxref=GeneID:4805888;Name=SSA_1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1026
NC_009009.1	RefSeq	CDS	1042934	1043677	.	+	0	ID=cds970;Parent=gene1012;Dbxref=Genbank:YP_001034991.1,GeneID:4805888;Name=YP_001034991.1;Note=GC: 43.95%25%3B Transporter classification TC:3.A.1.105.1. Codon Adaptation Index (CAI): 0.791. Curator(s): J. Alves;gbkey=CDS;product=multidrig ABC transporter ATPase;protein_id=YP_001034991.1;transl_table=11
NC_009009.1	RefSeq	gene	1043667	1045304	.	+	.	ID=gene1013;Dbxref=GeneID:4806196;Name=SSA_1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1027
NC_009009.1	RefSeq	CDS	1043667	1045304	.	+	0	ID=cds971;Parent=gene1013;Dbxref=Genbank:YP_001034992.1,GeneID:4806196;Name=YP_001034992.1;Note=GC: 42.43%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.77. Possibly membrane-related. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034992.1;transl_table=11
NC_009009.1	RefSeq	gene	1045380	1046153	.	-	.	ID=gene1014;Dbxref=GeneID:4806738;Name=SSA_1028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1028
NC_009009.1	RefSeq	CDS	1045380	1046153	.	-	0	ID=cds972;Parent=gene1014;Dbxref=Genbank:YP_001034993.1,GeneID:4806738;Name=YP_001034993.1;Note=GC: 42.12%25%3B Codon Adaptation Index (CAI): 0.735. Curator(s): J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001034993.1;transl_table=11
NC_009009.1	RefSeq	gene	1046257	1047099	.	-	.	ID=gene1015;Dbxref=GeneID:4806333;Name=SSA_1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1029
NC_009009.1	RefSeq	CDS	1046257	1047099	.	-	0	ID=cds973;Parent=gene1015;Dbxref=Genbank:YP_001034994.1,GeneID:4806333;Name=YP_001034994.1;Note=GC: 43.53%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): J. Alves%3B (DegV family);gbkey=CDS;product=hypothetical protein;protein_id=YP_001034994.1;transl_table=11
NC_009009.1	RefSeq	gene	1047234	1047809	.	+	.	ID=gene1016;Dbxref=GeneID:4806227;Name=SSA_1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1030
NC_009009.1	RefSeq	CDS	1047234	1047809	.	+	0	ID=cds974;Parent=gene1016;Dbxref=Genbank:YP_001034995.1,GeneID:4806227;Name=YP_001034995.1;Note=GC: 38.54%25%3B Codon Adaptation Index (CAI): 0.778. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_001034995.1;transl_table=11
NC_009009.1	RefSeq	gene	1047824	1048345	.	-	.	ID=gene1017;Dbxref=GeneID:4806305;Name=flaR;gbkey=Gene;gene=flaR;gene_biotype=protein_coding;locus_tag=SSA_1031
NC_009009.1	RefSeq	CDS	1047824	1048345	.	-	0	ID=cds975;Parent=gene1017;Dbxref=Genbank:YP_001034996.1,GeneID:4806305;Name=YP_001034996.1;Note=GC: 42.72%25%3B Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;gene=flaR;product=topology modulation protein;protein_id=YP_001034996.1;transl_table=11
NC_009009.1	RefSeq	gene	1048403	1048639	.	-	.	ID=gene1018;Dbxref=GeneID:4805844;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SSA_1032
NC_009009.1	RefSeq	CDS	1048403	1048639	.	-	0	ID=cds976;Parent=gene1018;Dbxref=Genbank:YP_001034997.1,GeneID:4805844;Name=YP_001034997.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=YP_001034997.1;transl_table=11
NC_009009.1	RefSeq	gene	1048710	1049630	.	-	.	ID=gene1019;Dbxref=GeneID:4806291;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=SSA_1033
NC_009009.1	RefSeq	CDS	1048710	1049630	.	-	0	ID=cds977;Parent=gene1019;Dbxref=Genbank:YP_001034998.1,GeneID:4806291;Name=YP_001034998.1;Note=catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=YP_001034998.1;transl_table=11
NC_009009.1	RefSeq	gene	1049725	1050312	.	+	.	ID=gene1020;Dbxref=GeneID:4806807;Name=SSA_1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1034
NC_009009.1	RefSeq	CDS	1049725	1050312	.	+	0	ID=cds978;Parent=gene1020;Dbxref=Genbank:YP_001034999.1,GeneID:4806807;Name=YP_001034999.1;Note=GC: 43.2%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001034999.1;transl_table=11
NC_009009.1	RefSeq	gene	1050314	1051591	.	+	.	ID=gene1021;Dbxref=GeneID:4806451;Name=pdp;gbkey=Gene;gene=pdp;gene_biotype=protein_coding;locus_tag=SSA_1035
NC_009009.1	RefSeq	CDS	1050314	1051591	.	+	0	ID=cds979;Parent=gene1021;Dbxref=Genbank:YP_001035000.1,GeneID:4806451;Name=YP_001035000.1;Note=Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway;gbkey=CDS;gene=pdp;product=pyrimidine-nucleoside phosphorylase;protein_id=YP_001035000.1;transl_table=11
NC_009009.1	RefSeq	gene	1051609	1052271	.	+	.	ID=gene1022;Dbxref=GeneID:4806728;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=SSA_1036
NC_009009.1	RefSeq	CDS	1051609	1052271	.	+	0	ID=cds980;Parent=gene1022;Dbxref=Genbank:YP_001035001.1,GeneID:4806728;Name=YP_001035001.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=YP_001035001.1;transl_table=11
NC_009009.1	RefSeq	gene	1052258	1052647	.	+	.	ID=gene1023;Dbxref=GeneID:4806375;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=SSA_1037
NC_009009.1	RefSeq	CDS	1052258	1052647	.	+	0	ID=cds981;Parent=gene1023;Dbxref=Genbank:YP_001035002.1,GeneID:4806375;Name=YP_001035002.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=YP_001035002.1;transl_table=11
NC_009009.1	RefSeq	gene	1052719	1053774	.	+	.	ID=gene1024;Dbxref=GeneID:4806769;Name=SSA_1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1038
NC_009009.1	RefSeq	CDS	1052719	1053774	.	+	0	ID=cds982;Parent=gene1024;Dbxref=Genbank:YP_001035003.1,GeneID:4806769;Name=YP_001035003.1;Note=GC: 41.38%25%3B Codon Adaptation Index (CAI): 0.814. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.999).;gbkey=CDS;product=lipoprotein;protein_id=YP_001035003.1;transl_table=11
NC_009009.1	RefSeq	gene	1053914	1055449	.	+	.	ID=gene1025;Dbxref=GeneID:4806611;Name=SSA_1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1039
NC_009009.1	RefSeq	CDS	1053914	1055449	.	+	0	ID=cds983;Parent=gene1025;Dbxref=Genbank:YP_001035004.1,GeneID:4806611;Name=YP_001035004.1;Note=GC: 43.62%25%3B Transporter classification TC:3.A.1.2.4. Codon Adaptation Index (CAI): 0.813.;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_001035004.1;transl_table=11
NC_009009.1	RefSeq	gene	1055442	1056536	.	+	.	ID=gene1026;Dbxref=GeneID:4806427;Name=SSA_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1040
NC_009009.1	RefSeq	CDS	1055442	1056536	.	+	0	ID=cds984;Parent=gene1026;Dbxref=Genbank:YP_001035005.1,GeneID:4806427;Name=YP_001035005.1;Note=GC: 42.19%25%3B Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 0.996).;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_001035005.1;transl_table=11
NC_009009.1	RefSeq	gene	1056538	1057494	.	+	.	ID=gene1027;Dbxref=GeneID:4806550;Name=SSA_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1041
NC_009009.1	RefSeq	CDS	1056538	1057494	.	+	0	ID=cds985;Parent=gene1027;Dbxref=Genbank:YP_001035006.1,GeneID:4806550;Name=YP_001035006.1;Note=GC: 45.25%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.767. SignalP prediction: Yes (prob. 0.992).;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_001035006.1;transl_table=11
NC_009009.1	RefSeq	gene	1057599	1058564	.	-	.	ID=gene1028;Dbxref=GeneID:4806032;Name=SSA_1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1042
NC_009009.1	RefSeq	CDS	1057599	1058564	.	-	0	ID=cds986;Parent=gene1028;Dbxref=Genbank:YP_001035007.1,GeneID:4806032;Name=YP_001035007.1;Note=GC: 42.24%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.774. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=xylanase/chitin deacetylase;protein_id=YP_001035007.1;transl_table=11
NC_009009.1	RefSeq	gene	1058705	1059991	.	+	.	ID=gene1029;Dbxref=GeneID:4806798;Name=hom;gbkey=Gene;gene=hom;gene_biotype=protein_coding;locus_tag=SSA_1043
NC_009009.1	RefSeq	CDS	1058705	1059991	.	+	0	ID=cds987;Parent=gene1029;Dbxref=Genbank:YP_001035008.1,GeneID:4806798;Name=YP_001035008.1;Note=catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine;gbkey=CDS;gene=hom;product=homoserine dehydrogenase;protein_id=YP_001035008.1;transl_table=11
NC_009009.1	RefSeq	gene	1059993	1060859	.	+	.	ID=gene1030;Dbxref=GeneID:4806377;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=SSA_1044
NC_009009.1	RefSeq	CDS	1059993	1060859	.	+	0	ID=cds988;Parent=gene1030;Dbxref=Genbank:YP_001035009.1,GeneID:4806377;Name=YP_001035009.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=YP_001035009.1;transl_table=11
NC_009009.1	RefSeq	gene	1060981	1061892	.	+	.	ID=gene1031;Dbxref=GeneID:4806488;Name=SSA_1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1045
NC_009009.1	RefSeq	CDS	1060981	1061892	.	+	0	ID=cds989;Parent=gene1031;Dbxref=Genbank:YP_001035010.1,GeneID:4806488;Name=YP_001035010.1;Note=GC: 40.79%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035010.1;transl_table=11
NC_009009.1	RefSeq	gene	1062000	1062905	.	+	.	ID=gene1032;Dbxref=GeneID:4806213;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SSA_1047
NC_009009.1	RefSeq	CDS	1062000	1062905	.	+	0	ID=cds990;Parent=gene1032;Dbxref=Genbank:YP_001035011.1,GeneID:4806213;Name=YP_001035011.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=YP_001035011.1;transl_table=11
NC_009009.1	RefSeq	gene	1063087	1064244	.	+	.	ID=gene1033;Dbxref=GeneID:4805839;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=SSA_1048
NC_009009.1	RefSeq	CDS	1063087	1064244	.	+	0	ID=cds991;Parent=gene1033;Dbxref=Genbank:YP_001035012.1,GeneID:4805839;Name=YP_001035012.1;Note=GC: 45.85%25%3B Transporter classification TC:3.A.1.11.1. Codon Adaptation Index (CAI): 0.82.;gbkey=CDS;gene=potA;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=YP_001035012.1;transl_table=11
NC_009009.1	RefSeq	gene	1064225	1065031	.	+	.	ID=gene1034;Dbxref=GeneID:4806141;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=SSA_1049
NC_009009.1	RefSeq	CDS	1064225	1065031	.	+	0	ID=cds992;Parent=gene1034;Dbxref=Genbank:YP_001035013.1,GeneID:4806141;Name=YP_001035013.1;Note=GC: 45.11%25%3B Transporter classification TC:3.A.1.11.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.77. SignalP prediction: Yes (prob. 0.625).;gbkey=CDS;gene=potB;product=spermidine/putrescine ABC transporter transmembrane protein;protein_id=YP_001035013.1;transl_table=11
NC_009009.1	RefSeq	gene	1065028	1065801	.	+	.	ID=gene1035;Dbxref=GeneID:4805868;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=SSA_1050
NC_009009.1	RefSeq	CDS	1065028	1065801	.	+	0	ID=cds993;Parent=gene1035;Dbxref=Genbank:YP_001035014.1,GeneID:4805868;Name=YP_001035014.1;Note=GC: 42.64%25%3B Transporter classification TC:3.A.1.11.1. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.787. SignalP prediction: Yes (prob. 0.529)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=potC;product=spermidine/putrescine ABC transporter permease;protein_id=YP_001035014.1;transl_table=11
NC_009009.1	RefSeq	gene	1065798	1066868	.	+	.	ID=gene1036;Dbxref=GeneID:4806343;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=SSA_1051
NC_009009.1	RefSeq	CDS	1065798	1066868	.	+	0	ID=cds994;Parent=gene1036;Dbxref=Genbank:YP_001035015.1,GeneID:4806343;Name=YP_001035015.1;Note=GC: 42.86%25%3B Transporter classification TC:3.A.1.11.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.811. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.929).;gbkey=CDS;gene=potD;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=YP_001035015.1;transl_table=11
NC_009009.1	RefSeq	gene	1066936	1067352	.	-	.	ID=gene1037;Dbxref=GeneID:4806171;Name=SSA_1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1052
NC_009009.1	RefSeq	CDS	1066936	1067352	.	-	0	ID=cds995;Parent=gene1037;Dbxref=Genbank:YP_001035016.1,GeneID:4806171;Name=YP_001035016.1;Note=GC: 42.21%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.787. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.738).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035016.1;transl_table=11
NC_009009.1	RefSeq	gene	1067537	1070158	.	-	.	ID=gene1038;Dbxref=GeneID:4808050;Name=SSA_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1053
NC_009009.1	RefSeq	CDS	1067537	1070158	.	-	0	ID=cds996;Parent=gene1038;Dbxref=Genbank:YP_001035017.1,GeneID:4808050;Name=YP_001035017.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate phosphate dikinase;protein_id=YP_001035017.1;transl_table=11
NC_009009.1	RefSeq	gene	1070404	1071033	.	+	.	ID=gene1039;Dbxref=GeneID:4806850;Name=SSA_1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1054
NC_009009.1	RefSeq	CDS	1070404	1071033	.	+	0	ID=cds997;Parent=gene1039;Dbxref=Genbank:YP_001035018.1,GeneID:4806850;Name=YP_001035018.1;Note=GC: 41.9%25%3B Codon Adaptation Index (CAI): 0.771. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035018.1;transl_table=11
NC_009009.1	RefSeq	gene	1071039	1071857	.	+	.	ID=gene1040;Dbxref=GeneID:4806905;Name=SSA_1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1055
NC_009009.1	RefSeq	CDS	1071039	1071857	.	+	0	ID=cds998;Parent=gene1040;Dbxref=Genbank:YP_001035019.1,GeneID:4806905;Name=YP_001035019.1;Note=GC: 43.1%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035019.1;transl_table=11
NC_009009.1	RefSeq	gene	1071900	1073810	.	+	.	ID=gene1041;Dbxref=GeneID:4807179;Name=SSA_1056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1056
NC_009009.1	RefSeq	CDS	1071900	1073810	.	+	0	ID=cds999;Parent=gene1041;Dbxref=Genbank:YP_001035020.1,GeneID:4807179;Name=YP_001035020.1;Note=GC: 44.85%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves;gbkey=CDS;product=Firmicute fructose-1%2C6-bisphosphatase;protein_id=YP_001035020.1;transl_table=11
NC_009009.1	RefSeq	gene	1073911	1075053	.	+	.	ID=gene1042;Dbxref=GeneID:4807287;Name=SSA_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1057
NC_009009.1	RefSeq	CDS	1073911	1075053	.	+	0	ID=cds1000;Parent=gene1042;Dbxref=Genbank:YP_001035021.1,GeneID:4807287;Name=YP_001035021.1;Note=GC: 45.06%25%3B Codon Adaptation Index (CAI): 0.745.;gbkey=CDS;product=class V aminotransferase;protein_id=YP_001035021.1;transl_table=11
NC_009009.1	RefSeq	gene	1075057	1076271	.	+	.	ID=gene1043;Dbxref=GeneID:4807040;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=SSA_1058
NC_009009.1	RefSeq	CDS	1075057	1076271	.	+	0	ID=cds1001;Parent=gene1043;Dbxref=Genbank:YP_001035022.1,GeneID:4807040;Name=YP_001035022.1;Note=Required for the synthesis of the thiazole moiety;gbkey=CDS;gene=thiI;product=thiamine biosynthesis protein ThiI;protein_id=YP_001035022.1;transl_table=11
NC_009009.1	RefSeq	gene	1076293	1076814	.	+	.	ID=gene1044;Dbxref=GeneID:4807206;Name=SSA_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1059
NC_009009.1	RefSeq	CDS	1076293	1076814	.	+	0	ID=cds1002;Parent=gene1044;Dbxref=Genbank:YP_001035023.1,GeneID:4807206;Name=YP_001035023.1;Note=GC: 35.82%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.773. SignalP prediction: Yes (prob. 0.593).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035023.1;transl_table=11
NC_009009.1	RefSeq	gene	1076905	1077507	.	+	.	ID=gene1045;Dbxref=GeneID:4806925;Name=SSA_1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1060
NC_009009.1	RefSeq	CDS	1076905	1077507	.	+	0	ID=cds1003;Parent=gene1045;Dbxref=Genbank:YP_001035024.1,GeneID:4806925;Name=YP_001035024.1;Note=GC: 33.83%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.75.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035024.1;transl_table=11
NC_009009.1	RefSeq	gene	1077732	1078046	.	+	.	ID=gene1046;Dbxref=GeneID:4806995;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SSA_1061
NC_009009.1	RefSeq	CDS	1077732	1078046	.	+	0	ID=cds1004;Parent=gene1046;Dbxref=Genbank:YP_001035025.1,GeneID:4806995;Name=YP_001035025.1;Note=GC: 40.95%25%3B Codon Adaptation Index (CAI): 0.85.;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=YP_001035025.1;transl_table=11
NC_009009.1	RefSeq	gene	1078424	1078717	.	+	.	ID=gene1047;Dbxref=GeneID:4806980;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SSA_1062
NC_009009.1	RefSeq	CDS	1078424	1078717	.	+	0	ID=cds1005;Parent=gene1047;Dbxref=Genbank:YP_001035026.1,GeneID:4806980;Name=YP_001035026.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=YP_001035026.1;transl_table=11
NC_009009.1	RefSeq	gene	1078968	1080320	.	+	.	ID=gene1048;Dbxref=GeneID:4806985;Name=SSA_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1063
NC_009009.1	RefSeq	CDS	1078968	1080320	.	+	0	ID=cds1006;Parent=gene1048;Dbxref=Genbank:YP_001035027.1,GeneID:4806985;Name=YP_001035027.1;Note=GC: 41.39%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999).;gbkey=CDS;product=peptidoglycan binding domain-containing protein;protein_id=YP_001035027.1;transl_table=11
NC_009009.1	RefSeq	gene	1080415	1081155	.	-	.	ID=gene1049;Dbxref=GeneID:4807311;Name=SSA_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1064
NC_009009.1	RefSeq	CDS	1080415	1081155	.	-	0	ID=cds1007;Parent=gene1049;Dbxref=Genbank:YP_001035028.1,GeneID:4807311;Name=YP_001035028.1;Note=GC: 40.49%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.761. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves%3B (contains glucan-binding domain);gbkey=CDS;product=hypothetical protein;protein_id=YP_001035028.1;transl_table=11
NC_009009.1	RefSeq	gene	1081398	1084190	.	+	.	ID=gene1050;Dbxref=GeneID:4807093;Name=SSA_1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1065
NC_009009.1	RefSeq	CDS	1081398	1084190	.	+	0	ID=cds1008;Parent=gene1050;Dbxref=Genbank:YP_001035029.1,GeneID:4807093;Name=YP_001035029.1;Note=GC: 45.47%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.766. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=Beta-hexosamidase A;protein_id=YP_001035029.1;transl_table=11
NC_009009.1	RefSeq	gene	1084475	1086436	.	+	.	ID=gene1051;Dbxref=GeneID:4807064;Name=aliB;gbkey=Gene;gene=aliB;gene_biotype=protein_coding;locus_tag=SSA_1066
NC_009009.1	RefSeq	CDS	1084475	1086436	.	+	0	ID=cds1009;Parent=gene1051;Dbxref=Genbank:YP_001035030.1,GeneID:4807064;Name=YP_001035030.1;Note=GC: 43.07%25%3B Transporter classification TC:3.A.1.5.1. Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;gene=aliB;product=peptide ABC transporter;protein_id=YP_001035030.1;transl_table=11
NC_009009.1	RefSeq	gene	1086539	1087405	.	+	.	ID=gene1052;Dbxref=GeneID:4807276;Name=SSA_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1067
NC_009009.1	RefSeq	CDS	1086539	1087405	.	+	0	ID=cds1010;Parent=gene1052;Dbxref=Genbank:YP_001035031.1,GeneID:4807276;Name=YP_001035031.1;Note=GC: 43.25%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035031.1;transl_table=11
NC_009009.1	RefSeq	gene	1087495	1088427	.	+	.	ID=gene1053;Dbxref=GeneID:4807262;Name=SSA_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1068
NC_009009.1	RefSeq	CDS	1087495	1088427	.	+	0	ID=cds1011;Parent=gene1053;Dbxref=Genbank:YP_001035032.1,GeneID:4807262;Name=YP_001035032.1;Note=GC: 44.27%25%3B Codon Adaptation Index (CAI): 0.802. Helix-turn-helix prediction: LysR. Curator(s): J. Alves;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_001035032.1;transl_table=11
NC_009009.1	RefSeq	gene	1088431	1088898	.	+	.	ID=gene1054;Dbxref=GeneID:4807151;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SSA_1069
NC_009009.1	RefSeq	CDS	1088431	1088898	.	+	0	ID=cds1012;Parent=gene1054;Dbxref=Genbank:YP_001035033.1,GeneID:4807151;Name=YP_001035033.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=YP_001035033.1;transl_table=11
NC_009009.1	RefSeq	gene	1088882	1089778	.	+	.	ID=gene1055;Dbxref=GeneID:4807146;Name=SSA_1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1070
NC_009009.1	RefSeq	CDS	1088882	1089778	.	+	0	ID=cds1013;Parent=gene1055;Dbxref=Genbank:YP_001035034.1,GeneID:4807146;Name=YP_001035034.1;Note=GC: 48.72%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=YP_001035034.1;transl_table=11
NC_009009.1	RefSeq	gene	1089895	1091004	.	+	.	ID=gene1056;Dbxref=GeneID:4807235;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=SSA_1072
NC_009009.1	RefSeq	CDS	1089895	1091004	.	+	0	ID=cds1014;Parent=gene1056;Dbxref=Genbank:YP_001035035.1,GeneID:4807235;Name=YP_001035035.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;gene=proB;product=gamma-glutamyl kinase;protein_id=YP_001035035.1;transl_table=11
NC_009009.1	RefSeq	gene	1091026	1092288	.	+	.	ID=gene1057;Dbxref=GeneID:4807068;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=SSA_1073
NC_009009.1	RefSeq	CDS	1091026	1092288	.	+	0	ID=cds1015;Parent=gene1057;Dbxref=Genbank:YP_001035036.1,GeneID:4807068;Name=YP_001035036.1;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=YP_001035036.1;transl_table=11
NC_009009.1	RefSeq	gene	1092291	1093094	.	+	.	ID=gene1058;Dbxref=GeneID:4807435;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=SSA_1074
NC_009009.1	RefSeq	CDS	1092291	1093094	.	+	0	ID=cds1016;Parent=gene1058;Dbxref=Genbank:YP_001035037.1,GeneID:4807435;Name=YP_001035037.1;Note=GC: 48.13%25%3B Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=YP_001035037.1;transl_table=11
NC_009009.1	RefSeq	gene	1093233	1094363	.	+	.	ID=gene1059;Dbxref=GeneID:4806634;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=SSA_1075
NC_009009.1	RefSeq	CDS	1093233	1094363	.	+	0	ID=cds1017;Parent=gene1059;Dbxref=Genbank:YP_001035038.1,GeneID:4806634;Name=YP_001035038.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;gene=hemN;product=coproporphyrinogen III oxidase;protein_id=YP_001035038.1;transl_table=11
NC_009009.1	RefSeq	gene	1094367	1095107	.	+	.	ID=gene1060;Dbxref=GeneID:4807212;Name=SSA_1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1076
NC_009009.1	RefSeq	CDS	1094367	1095107	.	+	0	ID=cds1018;Parent=gene1060;Dbxref=Genbank:YP_001035039.1,GeneID:4807212;Name=YP_001035039.1;Note=GC: 44.94%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035039.1;transl_table=11
NC_009009.1	RefSeq	gene	1095119	1095889	.	+	.	ID=gene1061;Dbxref=GeneID:4807251;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=SSA_1077
NC_009009.1	RefSeq	CDS	1095119	1095889	.	+	0	ID=cds1019;Parent=gene1061;Dbxref=Genbank:YP_001035040.1,GeneID:4807251;Name=YP_001035040.1;Note=GC: 47.34%25%3B Codon Adaptation Index (CAI): 0.74.;gbkey=CDS;gene=nagD;product=N-acetyl-glucosamine matabolism;protein_id=YP_001035040.1;transl_table=11
NC_009009.1	RefSeq	gene	1095882	1096511	.	+	.	ID=gene1062;Dbxref=GeneID:4806882;Name=SSA_1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1078
NC_009009.1	RefSeq	CDS	1095882	1096511	.	+	0	ID=cds1020;Parent=gene1062;Dbxref=Genbank:YP_001035041.1,GeneID:4806882;Name=YP_001035041.1;Note=GC: 37.3%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.791. SignalP prediction: Yes (prob. 0.549).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035041.1;transl_table=11
NC_009009.1	RefSeq	gene	1096525	1097508	.	+	.	ID=gene1063;Dbxref=GeneID:4807558;Name=SSA_1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1079
NC_009009.1	RefSeq	CDS	1096525	1097508	.	+	0	ID=cds1021;Parent=gene1063;Dbxref=Genbank:YP_001035042.1,GeneID:4807558;Name=YP_001035042.1;Note=GC: 37.7%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035042.1;transl_table=11
NC_009009.1	RefSeq	gene	1097678	1098421	.	+	.	ID=gene1064;Dbxref=GeneID:4807740;Name=fruR;gbkey=Gene;gene=fruR;gene_biotype=protein_coding;locus_tag=SSA_1080
NC_009009.1	RefSeq	CDS	1097678	1098421	.	+	0	ID=cds1022;Parent=gene1064;Dbxref=Genbank:YP_001035043.1,GeneID:4807740;Name=YP_001035043.1;Note=GC: 41.67%25%3B Codon Adaptation Index (CAI): 0.763. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=fruR;product=fructose operon transcriptional repressor;protein_id=YP_001035043.1;transl_table=11
NC_009009.1	RefSeq	gene	1098418	1099329	.	+	.	ID=gene1065;Dbxref=GeneID:4807659;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=SSA_1081
NC_009009.1	RefSeq	CDS	1098418	1099329	.	+	0	ID=cds1023;Parent=gene1065;Dbxref=Genbank:YP_001035044.1,GeneID:4807659;Name=YP_001035044.1;Note=GC: 43.97%25%3B Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;gene=fruB;product=1-phosphofructokinase;protein_id=YP_001035044.1;transl_table=11
NC_009009.1	RefSeq	gene	1099326	1101311	.	+	.	ID=gene1066;Dbxref=GeneID:4807609;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=SSA_1082
NC_009009.1	RefSeq	CDS	1099326	1101311	.	+	0	ID=cds1024;Parent=gene1066;Dbxref=Genbank:YP_001035045.1,GeneID:4807609;Name=YP_001035045.1;Note=GC: 43.96%25%3B Transporter classification TC:4.A.2.1.3. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;gene=fruA;product=PTS system fructose specific transporter subunit II ABC;protein_id=YP_001035045.1;transl_table=11
NC_009009.1	RefSeq	gene	1101438	1101812	.	+	.	ID=gene1067;Dbxref=GeneID:4807181;Name=SSA_1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1083
NC_009009.1	RefSeq	CDS	1101438	1101812	.	+	0	ID=cds1025;Parent=gene1067;Dbxref=Genbank:YP_001035046.1,GeneID:4807181;Name=YP_001035046.1;Note=GC: 38.67%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.818.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035046.1;transl_table=11
NC_009009.1	RefSeq	gene	1101815	1102663	.	+	.	ID=gene1068;Dbxref=GeneID:4807376;Name=SSA_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1084
NC_009009.1	RefSeq	CDS	1101815	1102663	.	+	0	ID=cds1026;Parent=gene1068;Dbxref=Genbank:YP_001035047.1,GeneID:4807376;Name=YP_001035047.1;Note=GC: 43.82%25%3B Codon Adaptation Index (CAI): 0.793.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035047.1;transl_table=11
NC_009009.1	RefSeq	gene	1102704	1103471	.	+	.	ID=gene1069;Dbxref=GeneID:4807714;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=SSA_1085
NC_009009.1	RefSeq	CDS	1102704	1103471	.	+	0	ID=cds1027;Parent=gene1069;Dbxref=Genbank:YP_001035048.1,GeneID:4807714;Name=YP_001035048.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=YP_001035048.1;transl_table=11
NC_009009.1	RefSeq	gene	1103468	1104667	.	+	.	ID=gene1070;Dbxref=GeneID:4807605;Name=papS;gbkey=Gene;gene=papS;gene_biotype=protein_coding;locus_tag=SSA_1086
NC_009009.1	RefSeq	CDS	1103468	1104667	.	+	0	ID=cds1028;Parent=gene1070;Dbxref=Genbank:YP_001035049.1,GeneID:4807605;Name=YP_001035049.1;Note=catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA%3B these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity;gbkey=CDS;gene=papS;product=tRNA CCA-pyrophosphorylase;protein_id=YP_001035049.1;transl_table=11
NC_009009.1	RefSeq	gene	1104664	1106532	.	+	.	ID=gene1071;Dbxref=GeneID:4807431;Name=SSA_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1087
NC_009009.1	RefSeq	CDS	1104664	1106532	.	+	0	ID=cds1029;Parent=gene1071;Dbxref=Genbank:YP_001035050.1,GeneID:4807431;Name=YP_001035050.1;Note=GC: 45.37%25%3B Transporter classification TC:3.A.1.120.4. Codon Adaptation Index (CAI): 0.786. Curator(s): J. Alves;gbkey=CDS;product=antibiotic ABC transporter ATPase;protein_id=YP_001035050.1;transl_table=11
NC_009009.1	RefSeq	gene	1107188	1107598	.	+	.	ID=gene1072;Dbxref=GeneID:4807602;Name=SSA_1088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1088
NC_009009.1	RefSeq	CDS	1107188	1107598	.	+	0	ID=cds1030;Parent=gene1072;Dbxref=Genbank:YP_001035051.1,GeneID:4807602;Name=YP_001035051.1;Note=GC: 39.9%25%3B Codon Adaptation Index (CAI): 0.733.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035051.1;transl_table=11
NC_009009.1	RefSeq	gene	1107567	1107674	.	+	.	ID=gene1073;Dbxref=GeneID:4807065;Name=SSA_1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1089
NC_009009.1	RefSeq	CDS	1107567	1107674	.	+	0	ID=cds1031;Parent=gene1073;Dbxref=Genbank:YP_001035052.1,GeneID:4807065;Name=YP_001035052.1;Note=GC: 25.93%25%3B Codon Adaptation Index (CAI): 0.714.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035052.1;transl_table=11
NC_009009.1	RefSeq	gene	1107711	1108670	.	+	.	ID=gene1074;Dbxref=GeneID:4808034;Name=glcK;gbkey=Gene;gene=glcK;gene_biotype=protein_coding;locus_tag=SSA_1090
NC_009009.1	RefSeq	CDS	1107711	1108670	.	+	0	ID=cds1032;Parent=gene1074;Dbxref=Genbank:YP_001035053.1,GeneID:4808034;Name=YP_001035053.1;Note=GC: 46.15%25%3B Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;gene=glcK;product=glucokinase;protein_id=YP_001035053.1;transl_table=11
NC_009009.1	RefSeq	gene	1108775	1109614	.	+	.	ID=gene1075;Dbxref=GeneID:4807197;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=SSA_1091
NC_009009.1	RefSeq	CDS	1108775	1109614	.	+	0	ID=cds1033;Parent=gene1075;Dbxref=Genbank:YP_001035054.1,GeneID:4807197;Name=YP_001035054.1;Note=ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived;gbkey=CDS;gene=thyA;product=thymidylate synthase;protein_id=YP_001035054.1;transl_table=11
NC_009009.1	RefSeq	gene	1109739	1110251	.	+	.	ID=gene1076;Dbxref=GeneID:4807479;Name=dfrA;gbkey=Gene;gene=dfrA;gene_biotype=protein_coding;locus_tag=SSA_1092
NC_009009.1	RefSeq	CDS	1109739	1110251	.	+	0	ID=cds1034;Parent=gene1076;Dbxref=Genbank:YP_001035055.1,GeneID:4807479;Name=YP_001035055.1;Note=GC: 41.33%25%3B Codon Adaptation Index (CAI): 0.831.;gbkey=CDS;gene=dfrA;product=dihydrofolate reductase;protein_id=YP_001035055.1;transl_table=11
NC_009009.1	RefSeq	gene	1110476	1111705	.	+	.	ID=gene1077;Dbxref=GeneID:4807761;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SSA_1093
NC_009009.1	RefSeq	CDS	1110476	1111705	.	+	0	ID=cds1035;Parent=gene1077;Dbxref=Genbank:YP_001035056.1,GeneID:4807761;Name=YP_001035056.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=YP_001035056.1;transl_table=11
NC_009009.1	RefSeq	gene	1111716	1112303	.	+	.	ID=gene1078;Dbxref=GeneID:4806903;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;gene_synonym=yihA,ysxC;locus_tag=SSA_1094
NC_009009.1	RefSeq	CDS	1111716	1112303	.	+	0	ID=cds1036;Parent=gene1078;Dbxref=Genbank:YP_001035057.1,GeneID:4806903;Name=YP_001035057.1;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;gbkey=CDS;gene=engB;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=YP_001035057.1;transl_table=11
NC_009009.1	RefSeq	gene	1112450	1113148	.	+	.	ID=gene1079;Dbxref=GeneID:4807359;Name=mur2;gbkey=Gene;gene=mur2;gene_biotype=protein_coding;locus_tag=SSA_1095
NC_009009.1	RefSeq	CDS	1112450	1113148	.	+	0	ID=cds1037;Parent=gene1079;Dbxref=Genbank:YP_001035058.1,GeneID:4807359;Name=YP_001035058.1;Note=GC: 41.63%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.815. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=mur2;product=peptidoglycan hydrolase;protein_id=YP_001035058.1;transl_table=11
NC_009009.1	RefSeq	gene	1113212	1114159	.	+	.	ID=gene1080;Dbxref=GeneID:4806957;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=SSA_1096
NC_009009.1	RefSeq	CDS	1113212	1114159	.	+	0	ID=cds1038;Parent=gene1080;Dbxref=Genbank:YP_001035059.1,GeneID:4806957;Name=YP_001035059.1;Note=converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines;gbkey=CDS;gene=mmuM;product=homocysteine methyltransferase;protein_id=YP_001035059.1;transl_table=11
NC_009009.1	RefSeq	gene	1114274	1115071	.	+	.	ID=gene1081;Dbxref=GeneID:4807984;Name=SSA_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1098
NC_009009.1	RefSeq	CDS	1114274	1115071	.	+	0	ID=cds1039;Parent=gene1081;Dbxref=Genbank:YP_001035060.1,GeneID:4807984;Name=YP_001035060.1;Note=GC: 42.48%25%3B Transporter classification TC:2.A.44.3.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=formate/nitrate transporter;protein_id=YP_001035060.1;transl_table=11
NC_009009.1	RefSeq	gene	1115501	1119934	.	+	.	ID=gene1082;Dbxref=GeneID:4807721;Name=SSA_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1099
NC_009009.1	RefSeq	CDS	1115501	1119934	.	+	0	ID=cds1040;Parent=gene1082;Dbxref=Genbank:YP_001035061.1,GeneID:4807721;Name=YP_001035061.1;Note=GC: 40.78%25%3B Codon Adaptation Index (CAI): 0.779. Curator(s): J. Alves;gbkey=CDS;product=calcium binding hemolysin-like protein;protein_id=YP_001035061.1;transl_table=11
NC_009009.1	RefSeq	gene	1120013	1122148	.	+	.	ID=gene1083;Dbxref=GeneID:4807544;Name=SSA_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1100
NC_009009.1	RefSeq	CDS	1120013	1122148	.	+	0	ID=cds1041;Parent=gene1083;Dbxref=Genbank:YP_001035062.1,GeneID:4807544;Name=YP_001035062.1;Note=GC: 41.01%25%3B Transporter classification TC:3.A.1.109.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves;gbkey=CDS;product=hemolysin exporter%2C ATPase component;protein_id=YP_001035062.1;transl_table=11
NC_009009.1	RefSeq	gene	1122051	1123259	.	+	.	ID=gene1084;Dbxref=GeneID:4806897;Name=SSA_1101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1101
NC_009009.1	RefSeq	CDS	1122051	1123259	.	+	0	ID=cds1042;Parent=gene1084;Dbxref=Genbank:YP_001035063.1,GeneID:4806897;Name=YP_001035063.1;Note=GC: 36.81%25%3B Transporter classification TC:8.A.1.3.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.735. Curator(s): J. Alves;gbkey=CDS;product=multidrug resistance efflux pump/hemolysin secretion transmembrane protein;protein_id=YP_001035063.1;transl_table=11
NC_009009.1	RefSeq	gene	1123526	1123867	.	+	.	ID=gene1085;Dbxref=GeneID:4807509;Name=SSA_1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1102
NC_009009.1	RefSeq	CDS	1123526	1123867	.	+	0	ID=cds1043;Parent=gene1085;Dbxref=Genbank:YP_001035064.1,GeneID:4807509;Name=YP_001035064.1;Note=GC: 35.38%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.815. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035064.1;transl_table=11
NC_009009.1	RefSeq	gene	1123973	1124599	.	+	.	ID=gene1086;Dbxref=GeneID:4807401;Name=SSA_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1103
NC_009009.1	RefSeq	CDS	1123973	1124599	.	+	0	ID=cds1044;Parent=gene1086;Dbxref=Genbank:YP_001035065.1,GeneID:4807401;Name=YP_001035065.1;Note=GC: 33.33%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.781. SignalP prediction: Yes (prob. 0.502).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035065.1;transl_table=11
NC_009009.1	RefSeq	gene	1124883	1125383	.	+	.	ID=gene1087;Dbxref=GeneID:4807125;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SSA_1104
NC_009009.1	RefSeq	CDS	1124883	1125383	.	+	0	ID=cds1045;Parent=gene1087;Dbxref=Genbank:YP_001035066.1,GeneID:4807125;Name=YP_001035066.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=YP_001035066.1;transl_table=11
NC_009009.1	RefSeq	gene	1125457	1125825	.	+	.	ID=gene1088;Dbxref=GeneID:4807477;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SSA_1105
NC_009009.1	RefSeq	CDS	1125457	1125825	.	+	0	ID=cds1046;Parent=gene1088;Dbxref=Genbank:YP_001035067.1,GeneID:4807477;Name=YP_001035067.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=YP_001035067.1;transl_table=11
NC_009009.1	RefSeq	gene	1126114	1131738	.	+	.	ID=gene1089;Dbxref=GeneID:4807240;Name=iga;gbkey=Gene;gene=iga;gene_biotype=protein_coding;locus_tag=SSA_1106
NC_009009.1	RefSeq	CDS	1126114	1131738	.	+	0	ID=cds1047;Parent=gene1089;Dbxref=Genbank:YP_001035068.1,GeneID:4807240;Name=YP_001035068.1;Note=GC: 40.46%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;gene=iga;product=IgA-specific metalloendopeptidase;protein_id=YP_001035068.1;transl_table=11
NC_009009.1	RefSeq	gene	1132108	1133844	.	+	.	ID=gene1090;Dbxref=GeneID:4806492;Name=SSA_1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1107
NC_009009.1	RefSeq	CDS	1132108	1133844	.	+	0	ID=cds1048;Parent=gene1090;Dbxref=Genbank:YP_001035069.1,GeneID:4806492;Name=YP_001035069.1;Note=GC: 46.86%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=Lipid/multidrug/protein-type ABC exporter%2C ATP binding/membrane-spanning protein;protein_id=YP_001035069.1;transl_table=11
NC_009009.1	RefSeq	gene	1133858	1135636	.	+	.	ID=gene1091;Dbxref=GeneID:4807909;Name=SSA_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1109
NC_009009.1	RefSeq	CDS	1133858	1135636	.	+	0	ID=cds1049;Parent=gene1091;Dbxref=Genbank:YP_001035070.1,GeneID:4807909;Name=YP_001035070.1;Note=GC: 44.29%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.802. SignalP prediction: Yes (prob. 0.483)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=YP_001035070.1;transl_table=11
NC_009009.1	RefSeq	gene	1135691	1136245	.	+	.	ID=gene1092;Dbxref=GeneID:4807503;Name=SSA_1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1110
NC_009009.1	RefSeq	CDS	1135691	1136245	.	+	0	ID=cds1050;Parent=gene1092;Dbxref=Genbank:YP_001035071.1,GeneID:4807503;Name=YP_001035071.1;Note=GC: 37.84%25%3B Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035071.1;transl_table=11
NC_009009.1	RefSeq	gene	1136672	1138000	.	+	.	ID=gene1093;Dbxref=GeneID:4807622;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=SSA_1111
NC_009009.1	RefSeq	CDS	1136672	1138000	.	+	0	ID=cds1051;Parent=gene1093;Dbxref=Genbank:YP_001035072.1,GeneID:4807622;Name=YP_001035072.1;Note=GC: 42.81%25%3B Transporter classification TC:2.A.26.1.1. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.778. SignalP prediction: Yes (prob. 0.97).;gbkey=CDS;gene=brnQ;product=branched chain amino acid ABC transporter carrier protein;protein_id=YP_001035072.1;transl_table=11
NC_009009.1	RefSeq	gene	1138221	1139798	.	+	.	ID=gene1094;Dbxref=GeneID:4807825;Name=SSA_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1112
NC_009009.1	RefSeq	CDS	1138221	1139798	.	+	0	ID=cds1052;Parent=gene1094;Dbxref=Genbank:YP_001035073.1,GeneID:4807825;Name=YP_001035073.1;Note=GC: 41.25%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.793. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=YP_001035073.1;transl_table=11
NC_009009.1	RefSeq	gene	1139882	1140580	.	+	.	ID=gene1095;Dbxref=GeneID:4807541;Name=SSA_1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1113
NC_009009.1	RefSeq	CDS	1139882	1140580	.	+	0	ID=cds1053;Parent=gene1095;Dbxref=Genbank:YP_001035074.1,GeneID:4807541;Name=YP_001035074.1;Note=GC: 41.2%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035074.1;transl_table=11
NC_009009.1	RefSeq	gene	1140577	1141611	.	+	.	ID=gene1096;Dbxref=GeneID:4806945;Name=SSA_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1114
NC_009009.1	RefSeq	CDS	1140577	1141611	.	+	0	ID=cds1054;Parent=gene1096;Dbxref=Genbank:YP_001035075.1,GeneID:4806945;Name=YP_001035075.1;Note=GC: 40.77%25%3B Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. SignalP prediction: Yes (prob. 0.727).;gbkey=CDS;product=histidine kinase;protein_id=YP_001035075.1;transl_table=11
NC_009009.1	RefSeq	gene	1141754	1142464	.	+	.	ID=gene1097;Dbxref=GeneID:4807190;Name=SSA_1115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1115
NC_009009.1	RefSeq	CDS	1141754	1142464	.	+	0	ID=cds1055;Parent=gene1097;Dbxref=Genbank:YP_001035076.1,GeneID:4807190;Name=YP_001035076.1;Note=GC: 43.88%25%3B Transporter classification TC:5.A.1.2.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.744. SignalP prediction: Yes (prob. 0.5).;gbkey=CDS;product=cytochrome C-type biogenesis protein;protein_id=YP_001035076.1;transl_table=11
NC_009009.1	RefSeq	gene	1142492	1142812	.	+	.	ID=gene1098;Dbxref=GeneID:4807594;Name=SSA_1116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1116
NC_009009.1	RefSeq	CDS	1142492	1142812	.	+	0	ID=cds1056;Parent=gene1098;Dbxref=Genbank:YP_001035077.1,GeneID:4807594;Name=YP_001035077.1;Note=GC: 37.69%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.829. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.996).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035077.1;transl_table=11
NC_009009.1	RefSeq	gene	1142883	1143446	.	+	.	ID=gene1099;Dbxref=GeneID:4807918;Name=SSA_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1117
NC_009009.1	RefSeq	CDS	1142883	1143446	.	+	0	ID=cds1057;Parent=gene1099;Dbxref=Genbank:YP_001035078.1,GeneID:4807918;Name=YP_001035078.1;Note=GC: 40.6%25%3B Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.995).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035078.1;transl_table=11
NC_009009.1	RefSeq	gene	1143462	1144571	.	+	.	ID=gene1100;Dbxref=GeneID:4807772;Name=SSA_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1118
NC_009009.1	RefSeq	CDS	1143462	1144571	.	+	0	ID=cds1058;Parent=gene1100;Dbxref=Genbank:YP_001035079.1,GeneID:4807772;Name=YP_001035079.1;Note=GC: 43.24%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.811. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.894).;gbkey=CDS;product=peptide methionine sulfoxide reductase;protein_id=YP_001035079.1;transl_table=11
NC_009009.1	RefSeq	gene	1144631	1145365	.	+	.	ID=gene1101;Dbxref=GeneID:4807696;Name=SSA_1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1119
NC_009009.1	RefSeq	CDS	1144631	1145365	.	+	0	ID=cds1059;Parent=gene1101;Dbxref=Genbank:YP_001035080.1,GeneID:4807696;Name=YP_001035080.1;Note=GC: 42.04%25%3B Codon Adaptation Index (CAI): 0.771. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035080.1;transl_table=11
NC_009009.1	RefSeq	gene	1145362	1147065	.	+	.	ID=gene1102;Dbxref=GeneID:4807774;Name=SSA_1120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1120
NC_009009.1	RefSeq	CDS	1145362	1147065	.	+	0	ID=cds1060;Parent=gene1102;Dbxref=Genbank:YP_001035081.1,GeneID:4807774;Name=YP_001035081.1;Note=GC: 44.25%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.793. SignalP prediction: Yes (prob. 0.513)%3B Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=two-component sensor kinase;protein_id=YP_001035081.1;transl_table=11
NC_009009.1	RefSeq	gene	1147289	1147996	.	+	.	ID=gene1103;Dbxref=GeneID:4807192;Name=SSA_1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1121
NC_009009.1	RefSeq	CDS	1147289	1147996	.	+	0	ID=cds1061;Parent=gene1103;Dbxref=Genbank:YP_001035082.1,GeneID:4807192;Name=YP_001035082.1;Note=GC: 41.53%25%3B Transporter classification TC:5.A.1.2.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.78.;gbkey=CDS;product=cytochrome C-type biogenesis protein;protein_id=YP_001035082.1;transl_table=11
NC_009009.1	RefSeq	gene	1148011	1148586	.	+	.	ID=gene1104;Dbxref=GeneID:4806819;Name=SSA_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1122
NC_009009.1	RefSeq	CDS	1148011	1148586	.	+	0	ID=cds1062;Parent=gene1104;Dbxref=Genbank:YP_001035083.1,GeneID:4806819;Name=YP_001035083.1;Note=GC: 43.06%25%3B Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.998).;gbkey=CDS;product=thioredoxin family protein;protein_id=YP_001035083.1;transl_table=11
NC_009009.1	RefSeq	gene	1148637	1149881	.	-	.	ID=gene1105;Dbxref=GeneID:4806066;Name=SSA_1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1124
NC_009009.1	RefSeq	CDS	1148637	1149881	.	-	0	ID=cds1063;Parent=gene1105;Dbxref=Genbank:YP_001035084.1,GeneID:4806066;Name=YP_001035084.1;Note=GC: 43.61%25%3B Codon Adaptation Index (CAI): 0.801.;gbkey=CDS;product=oxidoreductase;protein_id=YP_001035084.1;transl_table=11
NC_009009.1	RefSeq	gene	1149899	1150504	.	-	.	ID=gene1106;Dbxref=GeneID:4806016;Name=SSA_1125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1125
NC_009009.1	RefSeq	CDS	1149899	1150504	.	-	0	ID=cds1064;Parent=gene1106;Dbxref=Genbank:YP_001035085.1,GeneID:4806016;Name=YP_001035085.1;Note=GC: 40.92%25%3B Codon Adaptation Index (CAI): 0.795. Curator(s): J. Alves;gbkey=CDS;product=NADPH-dependent FMN reductase;protein_id=YP_001035085.1;transl_table=11
NC_009009.1	RefSeq	gene	1150677	1151612	.	-	.	ID=gene1107;Dbxref=GeneID:4807536;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=SSA_1126
NC_009009.1	RefSeq	CDS	1150677	1151612	.	-	0	ID=cds1065;Parent=gene1107;Dbxref=Genbank:YP_001035086.1,GeneID:4807536;Name=YP_001035086.1;Note=GC: 45.51%25%3B Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;gene=apbE;product=thiamine biosynthesis lipoprotein;protein_id=YP_001035086.1;transl_table=11
NC_009009.1	RefSeq	gene	1151871	1153247	.	+	.	ID=gene1108;Dbxref=GeneID:4806795;Name=nox;gbkey=Gene;gene=nox;gene_biotype=protein_coding;locus_tag=SSA_1127
NC_009009.1	RefSeq	CDS	1151871	1153247	.	+	0	ID=cds1066;Parent=gene1108;Dbxref=Genbank:YP_001035087.1,GeneID:4806795;Name=YP_001035087.1;Note=GC: 40.38%25%3B Codon Adaptation Index (CAI): 0.812. Curator(s): J. Alves;gbkey=CDS;gene=nox;product=H2O-forming NADH dehydrogenase;protein_id=YP_001035087.1;transl_table=11
NC_009009.1	RefSeq	gene	1153390	1154946	.	+	.	ID=gene1109;Dbxref=GeneID:4808035;Name=SSA_1128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1128
NC_009009.1	RefSeq	CDS	1153390	1154946	.	+	0	ID=cds1067;Parent=gene1109;Dbxref=Genbank:YP_001035088.1,GeneID:4808035;Name=YP_001035088.1;Note=GC: 46.11%25%3B Transporter classification TC:1.A.11.5.1. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves;gbkey=CDS;product=voltage gated chloride channel EriC;protein_id=YP_001035088.1;transl_table=11
NC_009009.1	RefSeq	gene	1155065	1155937	.	+	.	ID=gene1110;Dbxref=GeneID:4806583;Name=SSA_1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1129
NC_009009.1	RefSeq	CDS	1155065	1155937	.	+	0	ID=cds1068;Parent=gene1110;Dbxref=Genbank:YP_001035089.1,GeneID:4806583;Name=YP_001035089.1;Note=GC: 43.76%25%3B Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=periplasmic iron transport lipoprotein;protein_id=YP_001035089.1;transl_table=11
NC_009009.1	RefSeq	gene	1155942	1157150	.	+	.	ID=gene1111;Dbxref=GeneID:4806658;Name=SSA_1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1130
NC_009009.1	RefSeq	CDS	1155942	1157150	.	+	0	ID=cds1069;Parent=gene1111;Dbxref=Genbank:YP_001035090.1,GeneID:4806658;Name=YP_001035090.1;Note=GC: 47.39%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.785. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.752)%3B Curator(s): J. Alves;gbkey=CDS;product=Iron-dependent peroxidase;protein_id=YP_001035090.1;transl_table=11
NC_009009.1	RefSeq	gene	1157323	1158828	.	+	.	ID=gene1112;Dbxref=GeneID:4806823;Name=SSA_1131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1131
NC_009009.1	RefSeq	CDS	1157323	1158828	.	+	0	ID=cds1070;Parent=gene1112;Dbxref=Genbank:YP_001035091.1,GeneID:4806823;Name=YP_001035091.1;Note=GC: 45.02%25%3B Transporter classification TC:9.A.17.1.1. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=high-affinity Fe 2+/Pb2+ permease;protein_id=YP_001035091.1;transl_table=11
NC_009009.1	RefSeq	gene	1158785	1159537	.	+	.	ID=gene1113;Dbxref=GeneID:4806556;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=SSA_1132
NC_009009.1	RefSeq	CDS	1158785	1159537	.	+	0	ID=cds1071;Parent=gene1113;Dbxref=Genbank:YP_001035092.1,GeneID:4806556;Name=YP_001035092.1;Note=GC: 43.82%25%3B Transporter classification TC:2.A.64.1.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.89)%3B Curator(s): J. Alves;gbkey=CDS;gene=tatC;product=TatC%2C sec-independent protein translocase;protein_id=YP_001035092.1;transl_table=11
NC_009009.1	RefSeq	gene	1159537	1159725	.	+	.	ID=gene1114;Dbxref=GeneID:4806045;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=SSA_1133
NC_009009.1	RefSeq	CDS	1159537	1159725	.	+	0	ID=cds1072;Parent=gene1114;Dbxref=Genbank:YP_001035093.1,GeneID:4806045;Name=YP_001035093.1;Note=GC: 42.86%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.769. Curator(s): J. Alves;gbkey=CDS;gene=tatA;product=TatA%2C sec-independent protein secretion pathway component;protein_id=YP_001035093.1;transl_table=11
NC_009009.1	RefSeq	gene	1159768	1160376	.	+	.	ID=gene1115;Dbxref=GeneID:4808079;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=SSA_1134
NC_009009.1	RefSeq	CDS	1159768	1160376	.	+	0	ID=cds1073;Parent=gene1115;Dbxref=Genbank:YP_001035094.1,GeneID:4808079;Name=YP_001035094.1;Note=Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine;gbkey=CDS;gene=xpt;product=xanthine phosphoribosyltransferase;protein_id=YP_001035094.1;transl_table=11
NC_009009.1	RefSeq	gene	1160492	1161835	.	+	.	ID=gene1116;Dbxref=GeneID:4806564;Name=norM;gbkey=Gene;gene=norM;gene_biotype=protein_coding;locus_tag=SSA_1135
NC_009009.1	RefSeq	CDS	1160492	1161835	.	+	0	ID=cds1074;Parent=gene1116;Dbxref=Genbank:YP_001035095.1,GeneID:4806564;Name=YP_001035095.1;Note=GC: 42.26%25%3B Transporter classification TC:2.A.66.1.3. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.765. SignalP prediction: Yes (prob. 0.525)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=norM;product=Na+-driven multidrug efflux pump;protein_id=YP_001035095.1;transl_table=11
NC_009009.1	RefSeq	gene	1162064	1164307	.	+	.	ID=gene1117;Dbxref=GeneID:4806752;Name=SSA_1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1136
NC_009009.1	RefSeq	CDS	1162064	1164307	.	+	0	ID=cds1075;Parent=gene1117;Dbxref=Genbank:YP_001035096.1,GeneID:4806752;Name=YP_001035096.1;Note=GC: 44.83%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=ATPases with chaperone activity%2C ATP-binding subunit;protein_id=YP_001035096.1;transl_table=11
NC_009009.1	RefSeq	gene	1164515	1165855	.	+	.	ID=gene1118;Dbxref=GeneID:4806348;Name=pdhD;gbkey=Gene;gene=pdhD;gene_biotype=protein_coding;locus_tag=SSA_1137
NC_009009.1	RefSeq	CDS	1164515	1165855	.	+	0	ID=cds1076;Parent=gene1118;Dbxref=Genbank:YP_001035097.1,GeneID:4806348;Name=YP_001035097.1;Note=GC: 44.07%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;gene=pdhD;product=dihydrolipoamide dehydrogenase;protein_id=YP_001035097.1;transl_table=11
NC_009009.1	RefSeq	gene	1165871	1166944	.	+	.	ID=gene1119;Dbxref=GeneID:4806114;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=SSA_1138
NC_009009.1	RefSeq	CDS	1165871	1166944	.	+	0	ID=cds1077;Parent=gene1119;Dbxref=Genbank:YP_001035098.1,GeneID:4806114;Name=YP_001035098.1;Note=GC: 45.34%25%3B Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;gene=pdhA;product=pyruvate dehydrogenase%2C TPP-dependent E1 component alpha-subunit;protein_id=YP_001035098.1;transl_table=11
NC_009009.1	RefSeq	gene	1166963	1167994	.	+	.	ID=gene1120;Dbxref=GeneID:4806745;Name=pdhB;gbkey=Gene;gene=pdhB;gene_biotype=protein_coding;locus_tag=SSA_1139
NC_009009.1	RefSeq	CDS	1166963	1167994	.	+	0	ID=cds1078;Parent=gene1120;Dbxref=Genbank:YP_001035099.1,GeneID:4806745;Name=YP_001035099.1;Note=GC: 45.83%25%3B Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;gene=pdhB;product=pyruvate dehydrogenase E1 component beta subunit;protein_id=YP_001035099.1;transl_table=11
NC_009009.1	RefSeq	gene	1168008	1169267	.	+	.	ID=gene1121;Dbxref=GeneID:4806916;Name=pdhC;gbkey=Gene;gene=pdhC;gene_biotype=protein_coding;locus_tag=SSA_1140
NC_009009.1	RefSeq	CDS	1168008	1169267	.	+	0	ID=cds1079;Parent=gene1121;Dbxref=Genbank:YP_001035100.1,GeneID:4806916;Name=YP_001035100.1;Note=GC: 46.9%25%3B Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;gene=pdhC;product=branched-chain alpha-keto acid dehydrogenase subunit E2;protein_id=YP_001035100.1;transl_table=11
NC_009009.1	RefSeq	gene	1169511	1172125	.	+	.	ID=gene1122;Dbxref=GeneID:4807201;Name=SSA_1141;Note=Transcriptional antiterminator (pseudogene)%3B GC: 37.06%25. Codon Adaptation Index (CAI): 0.7. Helix-turn-helix prediction: AraC. GO:0006355 (Process: regulation of transcription%2C DNA-dependent)%2C GO:0017111 (Function: nucleoside-triphosphatase activity). Curator(s): J. Alves;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SSA_1141;pseudo=true
NC_009009.1	RefSeq	gene	1172238	1173587	.	-	.	ID=gene1123;Dbxref=GeneID:4807963;Name=norM2;gbkey=Gene;gene=norM2;gene_biotype=protein_coding;locus_tag=SSA_1143
NC_009009.1	RefSeq	CDS	1172238	1173587	.	-	0	ID=cds1080;Parent=gene1123;Dbxref=Genbank:YP_001035101.1,GeneID:4807963;Name=YP_001035101.1;Note=GC: 44.67%25%3B Transporter classification TC:2.A.66.1.9. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.752. SignalP prediction: Yes (prob. 0.603)%3B Curator(s): J. Alves;gbkey=CDS;gene=norM2;product=Na+-driven multidrug efflux pump;protein_id=YP_001035101.1;transl_table=11
NC_009009.1	RefSeq	gene	1173739	1175700	.	-	.	ID=gene1124;Dbxref=GeneID:4807373;Name=SSA_1144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1144
NC_009009.1	RefSeq	CDS	1173739	1175700	.	-	0	ID=cds1081;Parent=gene1124;Dbxref=Genbank:YP_001035102.1,GeneID:4807373;Name=YP_001035102.1;Note=GC: 42.05%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=beta-N-acetylhexosaminidase;protein_id=YP_001035102.1;transl_table=11
NC_009009.1	RefSeq	gene	1175784	1176221	.	-	.	ID=gene1125;Dbxref=GeneID:4806029;Name=SSA_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1145
NC_009009.1	RefSeq	CDS	1175784	1176221	.	-	0	ID=cds1082;Parent=gene1125;Dbxref=Genbank:YP_001035103.1,GeneID:4806029;Name=YP_001035103.1;Note=GC: 36.07%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035103.1;transl_table=11
NC_009009.1	RefSeq	gene	1176593	1176925	.	+	.	ID=gene1126;Dbxref=GeneID:4806974;Name=ptcA;gbkey=Gene;gene=ptcA;gene_biotype=protein_coding;locus_tag=SSA_1146
NC_009009.1	RefSeq	CDS	1176593	1176925	.	+	0	ID=cds1083;Parent=gene1126;Dbxref=Genbank:YP_001035104.1,GeneID:4806974;Name=YP_001035104.1;Note=GC: 39.94%25%3B Transporter classification TC:4.A.3.2.1. Codon Adaptation Index (CAI): 0.744.;gbkey=CDS;gene=ptcA;product=phosphotransferase system cellobiose-specific component IIA;protein_id=YP_001035104.1;transl_table=11
NC_009009.1	RefSeq	gene	1176922	1177212	.	+	.	ID=gene1127;Dbxref=GeneID:4806450;Name=SSA_1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1147
NC_009009.1	RefSeq	CDS	1176922	1177212	.	+	0	ID=cds1084;Parent=gene1127;Dbxref=Genbank:YP_001035105.1,GeneID:4806450;Name=YP_001035105.1;Note=GC: 36.77%25%3B Transporter classification TC:4.A.3.2.2. Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=Beta-glucosides PTS%2C EIIB;protein_id=YP_001035105.1;transl_table=11
NC_009009.1	RefSeq	gene	1177226	1178533	.	+	.	ID=gene1128;Dbxref=GeneID:4805912;Name=SSA_1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1148
NC_009009.1	RefSeq	CDS	1177226	1178533	.	+	0	ID=cds1085;Parent=gene1128;Dbxref=Genbank:YP_001035106.1,GeneID:4805912;Name=YP_001035106.1;Note=GC: 40.29%25%3B Transporter classification TC:4.A.3.2.2. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.769. LipoP prediction: SpI.;gbkey=CDS;product=Beta-glucosides PTS%2C EIIC;protein_id=YP_001035106.1;transl_table=11
NC_009009.1	RefSeq	gene	1178539	1179936	.	+	.	ID=gene1129;Dbxref=GeneID:4806172;Name=SSA_1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1149
NC_009009.1	RefSeq	CDS	1178539	1179936	.	+	0	ID=cds1086;Parent=gene1129;Dbxref=Genbank:YP_001035107.1,GeneID:4806172;Name=YP_001035107.1;Note=GC: 39.77%25%3B Codon Adaptation Index (CAI): 0.78.;gbkey=CDS;product=glycosyl hydrolase family protein;protein_id=YP_001035107.1;transl_table=11
NC_009009.1	RefSeq	gene	1179984	1180166	.	-	.	ID=gene1130;Dbxref=GeneID:4807129;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=SSA_1150
NC_009009.1	RefSeq	CDS	1179984	1180166	.	-	0	ID=cds1087;Parent=gene1130;Dbxref=Genbank:YP_001035108.1,GeneID:4807129;Name=YP_001035108.1;Note=4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown;gbkey=CDS;gene=xylH;product=4-oxalocrotonate tautomerase;protein_id=YP_001035108.1;transl_table=11
NC_009009.1	RefSeq	gene	1180290	1180862	.	+	.	ID=gene1131;Dbxref=GeneID:4806402;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=SSA_1151
NC_009009.1	RefSeq	CDS	1180290	1180862	.	+	0	ID=cds1088;Parent=gene1131;Dbxref=Genbank:YP_001035109.1,GeneID:4806402;Name=YP_001035109.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;gene=tdk;product=thymidine kinase;protein_id=YP_001035109.1;transl_table=11
NC_009009.1	RefSeq	gene	1180899	1181978	.	+	.	ID=gene1132;Dbxref=GeneID:4807270;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SSA_1152
NC_009009.1	RefSeq	CDS	1180899	1181978	.	+	0	ID=cds1089;Parent=gene1132;Dbxref=Genbank:YP_001035110.1,GeneID:4807270;Name=YP_001035110.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=YP_001035110.1;transl_table=11
NC_009009.1	RefSeq	gene	1181978	1182808	.	+	.	ID=gene1133;Dbxref=GeneID:4807292;Name=hemK;gbkey=Gene;gene=hemK;gene_biotype=protein_coding;locus_tag=SSA_1153
NC_009009.1	RefSeq	CDS	1181978	1182808	.	+	0	ID=cds1090;Parent=gene1133;Dbxref=Genbank:YP_001035111.1,GeneID:4807292;Name=YP_001035111.1;Note=GC: 46.09%25%3B Codon Adaptation Index (CAI): 0.75.;gbkey=CDS;gene=hemK;product=HemK protein;protein_id=YP_001035111.1;transl_table=11
NC_009009.1	RefSeq	gene	1182801	1183391	.	+	.	ID=gene1134;Dbxref=GeneID:4806179;Name=SSA_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1154
NC_009009.1	RefSeq	CDS	1182801	1183391	.	+	0	ID=cds1091;Parent=gene1134;Dbxref=Genbank:YP_001035112.1,GeneID:4806179;Name=YP_001035112.1;Note=GC: 44.67%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035112.1;transl_table=11
NC_009009.1	RefSeq	gene	1183438	1184700	.	+	.	ID=gene1135;Dbxref=GeneID:4805948;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=SSA_1155
NC_009009.1	RefSeq	CDS	1183438	1184700	.	+	0	ID=cds1092;Parent=gene1135;Dbxref=Genbank:YP_001035113.1,GeneID:4805948;Name=YP_001035113.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=YP_001035113.1;transl_table=11
NC_009009.1	RefSeq	gene	1184702	1185676	.	+	.	ID=gene1136;Dbxref=GeneID:4807026;Name=SSA_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1156
NC_009009.1	RefSeq	CDS	1184702	1185676	.	+	0	ID=cds1093;Parent=gene1136;Dbxref=Genbank:YP_001035114.1,GeneID:4807026;Name=YP_001035114.1;Note=GC: 41.54%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035114.1;transl_table=11
NC_009009.1	RefSeq	gene	1185676	1186278	.	+	.	ID=gene1137;Dbxref=GeneID:4806075;Name=SSA_1157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1157
NC_009009.1	RefSeq	CDS	1185676	1186278	.	+	0	ID=cds1094;Parent=gene1137;Dbxref=Genbank:YP_001035115.1,GeneID:4806075;Name=YP_001035115.1;Note=GC: 43.12%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=PvaA-like protein;protein_id=YP_001035115.1;transl_table=11
NC_009009.1	RefSeq	gene	1186393	1187247	.	+	.	ID=gene1138;Dbxref=GeneID:4806267;Name=SSA_1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1158
NC_009009.1	RefSeq	CDS	1186393	1187247	.	+	0	ID=cds1095;Parent=gene1138;Dbxref=Genbank:YP_001035116.1,GeneID:4806267;Name=YP_001035116.1;Note=GC: 41.05%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.794. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.915)%3B Helix-turn-helix prediction: LysR.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035116.1;transl_table=11
NC_009009.1	RefSeq	gene	1187523	1188503	.	+	.	ID=gene1139;Dbxref=GeneID:4806161;Name=SSA_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1161
NC_009009.1	RefSeq	CDS	1187523	1188503	.	+	0	ID=cds1096;Parent=gene1139;Dbxref=Genbank:YP_001035117.1,GeneID:4806161;Name=YP_001035117.1;Note=GC: 43.43%25%3B Codon Adaptation Index (CAI): 0.774. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves%3B possibly secreted;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035117.1;transl_table=11
NC_009009.1	RefSeq	gene	1188579	1189340	.	-	.	ID=gene1140;Dbxref=GeneID:4808016;Name=SSA_1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1162
NC_009009.1	RefSeq	CDS	1188579	1189340	.	-	0	ID=cds1097;Parent=gene1140;Dbxref=Genbank:YP_001035118.1,GeneID:4808016;Name=YP_001035118.1;Note=GC: 40.42%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.754.;gbkey=CDS;product=fimbrial assembly protein fimC;protein_id=YP_001035118.1;transl_table=11
NC_009009.1	RefSeq	gene	1189426	1190988	.	-	.	ID=gene1141;Dbxref=GeneID:4805958;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SSA_1163
NC_009009.1	RefSeq	CDS	1189426	1190988	.	-	0	ID=cds1098;Parent=gene1141;Dbxref=Genbank:YP_001035119.1,GeneID:4805958;Name=YP_001035119.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=YP_001035119.1;transl_table=11
NC_009009.1	RefSeq	gene	1191097	1191228	.	-	.	ID=gene1142;Dbxref=GeneID:4806129;Name=SSA_1164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1164
NC_009009.1	RefSeq	CDS	1191097	1191228	.	-	0	ID=cds1099;Parent=gene1142;Dbxref=Genbank:YP_001035120.1,GeneID:4806129;Name=YP_001035120.1;Note=GC: 31.82%25%3B Codon Adaptation Index (CAI): 0.837. SignalP prediction: Yes (prob. 0.602).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035120.1;transl_table=11
NC_009009.1	RefSeq	gene	1191227	1191925	.	+	.	ID=gene1143;Dbxref=GeneID:4805981;Name=SSA_1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1165
NC_009009.1	RefSeq	CDS	1191227	1191925	.	+	0	ID=cds1100;Parent=gene1143;Dbxref=Genbank:YP_001035121.1,GeneID:4805981;Name=YP_001035121.1;Note=GC: 46.78%25%3B Codon Adaptation Index (CAI): 0.775. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_001035121.1;transl_table=11
NC_009009.1	RefSeq	gene	1192069	1192410	.	+	.	ID=gene1144;Dbxref=GeneID:4806251;Name=ylxM;gbkey=Gene;gene=ylxM;gene_biotype=protein_coding;locus_tag=SSA_1166
NC_009009.1	RefSeq	CDS	1192069	1192410	.	+	0	ID=cds1101;Parent=gene1144;Dbxref=Genbank:YP_001035122.1,GeneID:4806251;Name=YP_001035122.1;Note=GC: 41.52%25%3B Codon Adaptation Index (CAI): 0.758. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=ylxM;product=DNA-binding protein;protein_id=YP_001035122.1;transl_table=11
NC_009009.1	RefSeq	gene	1192657	1194231	.	+	.	ID=gene1145;Dbxref=GeneID:4806072;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=SSA_1167
NC_009009.1	RefSeq	CDS	1192657	1194231	.	+	0	ID=cds1102;Parent=gene1145;Dbxref=Genbank:YP_001035123.1,GeneID:4806072;Name=YP_001035123.1;Note=GC: 46.54%25%3B Transporter classification TC:3.A.5.1.1. Codon Adaptation Index (CAI): 0.814. Curator(s): J. Alves;gbkey=CDS;gene=ffh;product=SRP54%2C signal recognition particle GTPase protein;protein_id=YP_001035123.1;transl_table=11
NC_009009.1	RefSeq	gene	1194291	1195982	.	+	.	ID=gene1146;Dbxref=GeneID:4806436;Name=SSA_1168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1168
NC_009009.1	RefSeq	CDS	1194291	1195982	.	+	0	ID=cds1103;Parent=gene1146;Dbxref=Genbank:YP_001035124.1,GeneID:4806436;Name=YP_001035124.1;Note=GC: 30.14%25%3B Codon Adaptation Index (CAI): 0.756.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035124.1;transl_table=11
NC_009009.1	RefSeq	gene	1196091	1196906	.	+	.	ID=gene1147;Dbxref=GeneID:4807923;Name=SSA_1169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1169
NC_009009.1	RefSeq	CDS	1196091	1196906	.	+	0	ID=cds1104;Parent=gene1147;Dbxref=Genbank:YP_001035125.1,GeneID:4807923;Name=YP_001035125.1;Note=GC: 40.56%25%3B Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035125.1;transl_table=11
NC_009009.1	RefSeq	gene	1197023	1198051	.	-	.	ID=gene1148;Dbxref=GeneID:4806095;Name=SSA_1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1170
NC_009009.1	RefSeq	CDS	1197023	1198051	.	-	0	ID=cds1105;Parent=gene1148;Dbxref=Genbank:YP_001035126.1,GeneID:4806095;Name=YP_001035126.1;Note=GC: 26.92%25%3B Codon Adaptation Index (CAI): 0.77.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035126.1;transl_table=11
NC_009009.1	RefSeq	gene	1198228	1199298	.	+	.	ID=gene1149;Dbxref=GeneID:4807903;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=SSA_1171
NC_009009.1	RefSeq	CDS	1198228	1199298	.	+	0	ID=cds1106;Parent=gene1149;Dbxref=Genbank:YP_001035127.1,GeneID:4807903;Name=YP_001035127.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerS;gbkey=CDS;gene=xerS;product=site-specific tyrosine recombinase XerS;protein_id=YP_001035127.1;transl_table=11
NC_009009.1	RefSeq	gene	1199378	1200016	.	-	.	ID=gene1150;Dbxref=GeneID:4806178;Name=SSA_1172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1172
NC_009009.1	RefSeq	CDS	1199378	1200016	.	-	0	ID=cds1107;Parent=gene1150;Dbxref=Genbank:YP_001035128.1,GeneID:4806178;Name=YP_001035128.1;Note=GC: 41.16%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035128.1;transl_table=11
NC_009009.1	RefSeq	gene	1200182	1201171	.	-	.	ID=gene1151;Dbxref=GeneID:4806346;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=SSA_1173
NC_009009.1	RefSeq	CDS	1200182	1201171	.	-	0	ID=cds1108;Parent=gene1151;Dbxref=Genbank:YP_001035129.1,GeneID:4806346;Name=YP_001035129.1;Note=GC: 42.32%25%3B Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;gene=lplA;product=lipoate protein ligase A;protein_id=YP_001035129.1;transl_table=11
NC_009009.1	RefSeq	gene	1201238	1202944	.	-	.	ID=gene1152;Dbxref=GeneID:4807734;Name=acoL;gbkey=Gene;gene=acoL;gene_biotype=protein_coding;locus_tag=SSA_1174
NC_009009.1	RefSeq	CDS	1201238	1202944	.	-	0	ID=cds1109;Parent=gene1152;Dbxref=Genbank:YP_001035130.1,GeneID:4807734;Name=YP_001035130.1;Note=GC: 45.81%25%3B Codon Adaptation Index (CAI): 0.808.;gbkey=CDS;gene=acoL;product=dihydrolipoamide dehydrogenase;protein_id=YP_001035130.1;transl_table=11
NC_009009.1	RefSeq	gene	1203023	1204066	.	-	.	ID=gene1153;Dbxref=GeneID:4806480;Name=acoC;gbkey=Gene;gene=acoC;gene_biotype=protein_coding;locus_tag=SSA_1175
NC_009009.1	RefSeq	CDS	1203023	1204066	.	-	0	ID=cds1110;Parent=gene1153;Dbxref=Genbank:YP_001035131.1,GeneID:4806480;Name=YP_001035131.1;Note=unlike PdhC proteins from other organisms%2C some Mycoplasma lack an N-terminal lipoyl domain%3B in Mycoplasma hyopneumonia the PdhD proteins contains the lipoyl domain;gbkey=CDS;gene=acoC;product=dihydrolipoamide acetyltransferase;protein_id=YP_001035131.1;transl_table=11
NC_009009.1	RefSeq	gene	1204527	1205495	.	-	.	ID=gene1154;Dbxref=GeneID:4805957;Name=acoB;gbkey=Gene;gene=acoB;gene_biotype=protein_coding;locus_tag=SSA_1176
NC_009009.1	RefSeq	CDS	1204527	1205495	.	-	0	ID=cds1111;Parent=gene1154;Dbxref=Genbank:YP_001035132.1,GeneID:4805957;Name=YP_001035132.1;Note=GC: 46.96%25%3B Codon Adaptation Index (CAI): 0.795.;gbkey=CDS;gene=acoB;product=acetoin dehydrogenase%2C E1 component subunit beta;protein_id=YP_001035132.1;transl_table=11
NC_009009.1	RefSeq	gene	1205539	1206507	.	-	.	ID=gene1155;Dbxref=GeneID:4805902;Name=acoA;gbkey=Gene;gene=acoA;gene_biotype=protein_coding;locus_tag=SSA_1178
NC_009009.1	RefSeq	CDS	1205539	1206507	.	-	0	ID=cds1112;Parent=gene1155;Dbxref=Genbank:YP_001035133.1,GeneID:4805902;Name=YP_001035133.1;Note=GC: 44.58%25%3B Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;gene=acoA;product=acetoin dehydrogenase%2C E1 component subunit alpha;protein_id=YP_001035133.1;transl_table=11
NC_009009.1	RefSeq	gene	1206730	1207896	.	-	.	ID=gene1156;Dbxref=GeneID:4807606;Name=SSA_1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1179
NC_009009.1	RefSeq	CDS	1206730	1207896	.	-	0	ID=cds1113;Parent=gene1156;Dbxref=Genbank:YP_001035134.1,GeneID:4807606;Name=YP_001035134.1;Note=GC: 43.27%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): J. Alves;gbkey=CDS;product=carbamoylphosphate synthase large subunit / biotin carboxylase;protein_id=YP_001035134.1;transl_table=11
NC_009009.1	RefSeq	gene	1207909	1208649	.	-	.	ID=gene1157;Dbxref=GeneID:4806679;Name=SSA_1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1180
NC_009009.1	RefSeq	CDS	1207909	1208649	.	-	0	ID=cds1114;Parent=gene1157;Dbxref=Genbank:YP_001035135.1,GeneID:4806679;Name=YP_001035135.1;Note=GC: 45.75%25%3B Codon Adaptation Index (CAI): 0.802.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035135.1;transl_table=11
NC_009009.1	RefSeq	gene	1208682	1209506	.	-	.	ID=gene1158;Dbxref=GeneID:4807522;Name=SSA_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1181
NC_009009.1	RefSeq	CDS	1208682	1209506	.	-	0	ID=cds1115;Parent=gene1158;Dbxref=Genbank:YP_001035136.1,GeneID:4807522;Name=YP_001035136.1;Note=GC: 43.39%25%3B Codon Adaptation Index (CAI): 0.797.;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_001035136.1;transl_table=11
NC_009009.1	RefSeq	gene	1209622	1210956	.	-	.	ID=gene1159;Dbxref=GeneID:4806413;Name=gid;gbkey=Gene;gene=gid;gene_biotype=protein_coding;locus_tag=SSA_1182
NC_009009.1	RefSeq	CDS	1209622	1210956	.	-	0	ID=cds1116;Parent=gene1159;Dbxref=Genbank:YP_001035137.1,GeneID:4806413;Name=YP_001035137.1;Note=TrmFO%3B Gid%3B glucose-inhibited division protein%3B similar to GidA%3B the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant%3B modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine;gbkey=CDS;gene=gid;product=tRNA (uracil-5-)-methyltransferase Gid;protein_id=YP_001035137.1;transl_table=11
NC_009009.1	RefSeq	gene	1211058	1211543	.	-	.	ID=gene1160;Dbxref=GeneID:4805881;Name=SSA_1183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1183
NC_009009.1	RefSeq	CDS	1211058	1211543	.	-	0	ID=cds1117;Parent=gene1160;Dbxref=Genbank:YP_001035138.1,GeneID:4805881;Name=YP_001035138.1;Note=GC: 42.8%25%3B Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035138.1;transl_table=11
NC_009009.1	RefSeq	gene	1211602	1213695	.	-	.	ID=gene1161;Dbxref=GeneID:4807818;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=SSA_1184
NC_009009.1	RefSeq	CDS	1211602	1213695	.	-	0	ID=cds1118;Parent=gene1161;Dbxref=Genbank:YP_001035139.1,GeneID:4807818;Name=YP_001035139.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;gene=topA;product=DNA topoisomerase I;protein_id=YP_001035139.1;transl_table=11
NC_009009.1	RefSeq	gene	1213780	1214622	.	-	.	ID=gene1162;Dbxref=GeneID:4807694;Name=smf;gbkey=Gene;gene=smf;gene_biotype=protein_coding;locus_tag=SSA_1185
NC_009009.1	RefSeq	CDS	1213780	1214622	.	-	0	ID=cds1119;Parent=gene1162;Dbxref=Genbank:YP_001035140.1,GeneID:4807694;Name=YP_001035140.1;Note=GC: 42.11%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;gene=smf;product=DNA processing Smf protein;protein_id=YP_001035140.1;transl_table=11
NC_009009.1	RefSeq	gene	1214746	1215309	.	-	.	ID=gene1163;Dbxref=GeneID:4807744;Name=SSA_1186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1186
NC_009009.1	RefSeq	CDS	1214746	1215309	.	-	0	ID=cds1120;Parent=gene1163;Dbxref=Genbank:YP_001035141.1,GeneID:4807744;Name=YP_001035141.1;Note=GC: 43.44%25%3B Codon Adaptation Index (CAI): 0.807.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035141.1;transl_table=11
NC_009009.1	RefSeq	gene	1215285	1216127	.	-	.	ID=gene1164;Dbxref=GeneID:4807979;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=SSA_1187
NC_009009.1	RefSeq	CDS	1215285	1216127	.	-	0	ID=cds1121;Parent=gene1164;Dbxref=Genbank:YP_001035142.1,GeneID:4807979;Name=YP_001035142.1;Note=GC: 41.04%25%3B Codon Adaptation Index (CAI): 0.788. Curator(s): J. Alves;gbkey=CDS;gene=licT;product=BglG family transcriptional antiterminator;protein_id=YP_001035142.1;transl_table=11
NC_009009.1	RefSeq	gene	1216145	1216909	.	-	.	ID=gene1165;Dbxref=GeneID:4807516;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SSA_1188
NC_009009.1	RefSeq	CDS	1216145	1216909	.	-	0	ID=cds1122;Parent=gene1165;Dbxref=Genbank:YP_001035143.1,GeneID:4807516;Name=YP_001035143.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=YP_001035143.1;transl_table=11
NC_009009.1	RefSeq	gene	1216896	1217747	.	-	.	ID=gene1166;Dbxref=GeneID:4807488;Name=rbgA;gbkey=Gene;gene=rbgA;gene_biotype=protein_coding;gene_synonym=ylqF;locus_tag=SSA_1189
NC_009009.1	RefSeq	CDS	1216896	1217747	.	-	0	ID=cds1123;Parent=gene1166;Dbxref=Genbank:YP_001035144.1,GeneID:4807488;Name=YP_001035144.1;Note=essential GTPase%3B functions in ribosome assembly%3B binds a unique part of the 23S rRNA%3B interacts with ribosomal protein L25(Ctc);gbkey=CDS;gene=rbgA;product=ribosomal biogenesis GTPase;protein_id=YP_001035144.1;transl_table=11
NC_009009.1	RefSeq	gene	1217889	1218227	.	-	.	ID=gene1167;Dbxref=GeneID:4807380;Name=SSA_1190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1190
NC_009009.1	RefSeq	CDS	1217889	1218227	.	-	0	ID=cds1124;Parent=gene1167;Dbxref=Genbank:YP_001035145.1,GeneID:4807380;Name=YP_001035145.1;Note=GC: 42.48%25%3B Codon Adaptation Index (CAI): 0.815.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035145.1;transl_table=11
NC_009009.1	RefSeq	gene	1218312	1218413	.	-	.	ID=gene1168;Dbxref=GeneID:4807285;Name=SSA_1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1191
NC_009009.1	RefSeq	CDS	1218312	1218413	.	-	0	ID=cds1125;Parent=gene1168;Dbxref=Genbank:YP_001035146.1,GeneID:4807285;Name=YP_001035146.1;Note=GC: 25.49%25%3B Codon Adaptation Index (CAI): 0.828.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035146.1;transl_table=11
NC_009009.1	RefSeq	gene	1218525	1219124	.	-	.	ID=gene1169;Dbxref=GeneID:4807543;Name=SSA_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1192
NC_009009.1	RefSeq	CDS	1218525	1219124	.	-	0	ID=cds1126;Parent=gene1169;Dbxref=Genbank:YP_001035147.1,GeneID:4807543;Name=YP_001035147.1;Note=GC: 34%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035147.1;transl_table=11
NC_009009.1	RefSeq	gene	1219185	1220120	.	-	.	ID=gene1170;Dbxref=GeneID:4807648;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=SSA_1193
NC_009009.1	RefSeq	CDS	1219185	1220120	.	-	0	ID=cds1127;Parent=gene1170;Dbxref=Genbank:YP_001035148.1,GeneID:4807648;Name=YP_001035148.1;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapA;product=dihydrodipicolinate synthase;protein_id=YP_001035148.1;transl_table=11
NC_009009.1	RefSeq	gene	1220203	1221279	.	-	.	ID=gene1171;Dbxref=GeneID:4807362;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=SSA_1194
NC_009009.1	RefSeq	CDS	1220203	1221279	.	-	0	ID=cds1128;Parent=gene1171;Dbxref=Genbank:YP_001035149.1,GeneID:4807362;Name=YP_001035149.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;gene=asd;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_001035149.1;transl_table=11
NC_009009.1	RefSeq	gene	1221618	1222142	.	-	.	ID=gene1172;Dbxref=GeneID:4807305;Name=SSA_1196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1196
NC_009009.1	RefSeq	CDS	1221618	1222142	.	-	0	ID=cds1129;Parent=gene1172;Dbxref=Genbank:YP_001035150.1,GeneID:4807305;Name=YP_001035150.1;Note=GC: 38.1%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035150.1;transl_table=11
NC_009009.1	RefSeq	gene	1222139	1222789	.	-	.	ID=gene1173;Dbxref=GeneID:4806694;Name=alkD;gbkey=Gene;gene=alkD;gene_biotype=protein_coding;locus_tag=SSA_1197
NC_009009.1	RefSeq	CDS	1222139	1222789	.	-	0	ID=cds1130;Parent=gene1173;Dbxref=Genbank:YP_001035151.1,GeneID:4806694;Name=YP_001035151.1;Note=GC: 42.09%25%3B Codon Adaptation Index (CAI): 0.754.;gbkey=CDS;gene=alkD;product=DNA alkylation repair protein;protein_id=YP_001035151.1;transl_table=11
NC_009009.1	RefSeq	gene	1222793	1223404	.	-	.	ID=gene1174;Dbxref=GeneID:4807759;Name=SSA_1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1198
NC_009009.1	RefSeq	CDS	1222793	1223404	.	-	0	ID=cds1131;Parent=gene1174;Dbxref=Genbank:YP_001035152.1,GeneID:4807759;Name=YP_001035152.1;Note=GC: 41.83%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.809. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.774).;gbkey=CDS;product=twitching mobility protein PilT;protein_id=YP_001035152.1;transl_table=11
NC_009009.1	RefSeq	gene	1223401	1224048	.	-	.	ID=gene1175;Dbxref=GeneID:4808021;Name=SSA_1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1199
NC_009009.1	RefSeq	CDS	1223401	1224048	.	-	0	ID=cds1132;Parent=gene1175;Dbxref=Genbank:YP_001035153.1,GeneID:4808021;Name=YP_001035153.1;Note=GC: 42.75%25%3B Codon Adaptation Index (CAI): 0.742.;gbkey=CDS;product=phosphinothricin acetyltransferase;protein_id=YP_001035153.1;transl_table=11
NC_009009.1	RefSeq	gene	1224011	1225681	.	-	.	ID=gene1176;Dbxref=GeneID:4807947;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=SSA_1200
NC_009009.1	RefSeq	CDS	1224011	1225681	.	-	0	ID=cds1133;Parent=gene1176;Dbxref=Genbank:YP_001035154.1,GeneID:4807947;Name=YP_001035154.1;Note=catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate;gbkey=CDS;gene=fhs;product=formate--tetrahydrofolate ligase;protein_id=YP_001035154.1;transl_table=11
NC_009009.1	RefSeq	gene	1225895	1226578	.	+	.	ID=gene1177;Dbxref=GeneID:4806366;Name=SSA_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1201
NC_009009.1	RefSeq	CDS	1225895	1226578	.	+	0	ID=cds1134;Parent=gene1177;Dbxref=Genbank:YP_001035155.1,GeneID:4806366;Name=YP_001035155.1;Note=GC: 43.42%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=phosphopantothenate--cysteine ligase;protein_id=YP_001035155.1;transl_table=11
NC_009009.1	RefSeq	gene	1226590	1227141	.	+	.	ID=gene1178;Dbxref=GeneID:4806520;Name=dfp;gbkey=Gene;gene=dfp;gene_biotype=protein_coding;locus_tag=SSA_1202
NC_009009.1	RefSeq	CDS	1226590	1227141	.	+	0	ID=cds1135;Parent=gene1178;Dbxref=Genbank:YP_001035156.1,GeneID:4806520;Name=YP_001035156.1;Note=decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine.;gbkey=CDS;gene=dfp;product=phosphopantothenoylcysteine decarboxylase;protein_id=YP_001035156.1;transl_table=11
NC_009009.1	RefSeq	gene	1227125	1227688	.	+	.	ID=gene1179;Dbxref=GeneID:4806505;Name=SSA_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1203
NC_009009.1	RefSeq	CDS	1227125	1227688	.	+	0	ID=cds1136;Parent=gene1179;Dbxref=Genbank:YP_001035157.1,GeneID:4806505;Name=YP_001035157.1;Note=GC: 42.38%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.768. SignalP prediction: Yes (prob. 0.45).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035157.1;transl_table=11
NC_009009.1	RefSeq	gene	1227927	1229645	.	+	.	ID=gene1180;Dbxref=GeneID:4805969;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=SSA_1204
NC_009009.1	RefSeq	CDS	1227927	1229645	.	+	0	ID=cds1137;Parent=gene1180;Dbxref=Genbank:YP_001035158.1,GeneID:4805969;Name=YP_001035158.1;Note=GC: 44.5%25%3B Codon Adaptation Index (CAI): 0.821. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=YP_001035158.1;transl_table=11
NC_009009.1	RefSeq	gene	1229770	1230117	.	+	.	ID=gene1181;Dbxref=GeneID:4806818;Name=bta;gbkey=Gene;gene=bta;gene_biotype=protein_coding;locus_tag=SSA_1205
NC_009009.1	RefSeq	CDS	1229770	1230117	.	+	0	ID=cds1138;Parent=gene1181;Dbxref=Genbank:YP_001035159.1,GeneID:4806818;Name=YP_001035159.1;Note=GC: 42.24%25%3B Codon Adaptation Index (CAI): 0.826.;gbkey=CDS;gene=bta;product=hypothetical protein;protein_id=YP_001035159.1;transl_table=11
NC_009009.1	RefSeq	gene	1230161	1231321	.	-	.	ID=gene1182;Dbxref=GeneID:4807966;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=SSA_1206
NC_009009.1	RefSeq	CDS	1230161	1231321	.	-	0	ID=cds1139;Parent=gene1182;Dbxref=Genbank:YP_001035160.1,GeneID:4807966;Name=YP_001035160.1;Note=GC: 43.84%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;gene=mutY;product=A/G-specific adenine glycosylase;protein_id=YP_001035160.1;transl_table=11
NC_009009.1	RefSeq	gene	1231387	1232364	.	-	.	ID=gene1183;Dbxref=GeneID:4806718;Name=eutD;gbkey=Gene;gene=eutD;gene_biotype=protein_coding;locus_tag=SSA_1207
NC_009009.1	RefSeq	CDS	1231387	1232364	.	-	0	ID=cds1140;Parent=gene1183;Dbxref=Genbank:YP_001035161.1,GeneID:4806718;Name=YP_001035161.1;Note=in Salmonella this enzyme is required for ethanolamine catabolism%3B has higher affinity for CoA than Pta;gbkey=CDS;gene=eutD;product=phosphotransacetylase;protein_id=YP_001035161.1;transl_table=11
NC_009009.1	RefSeq	gene	1232388	1233275	.	-	.	ID=gene1184;Dbxref=GeneID:4807813;Name=SSA_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1208
NC_009009.1	RefSeq	CDS	1232388	1233275	.	-	0	ID=cds1141;Parent=gene1184;Dbxref=Genbank:YP_001035162.1,GeneID:4807813;Name=YP_001035162.1;Note=GC: 43.13%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;product=23S rRNA pseudouridine synthase;protein_id=YP_001035162.1;transl_table=11
NC_009009.1	RefSeq	gene	1233272	1234120	.	-	.	ID=gene1185;Dbxref=GeneID:4806163;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=SSA_1209
NC_009009.1	RefSeq	CDS	1233272	1234120	.	-	0	ID=cds1142;Parent=gene1185;Dbxref=Genbank:YP_001035163.1,GeneID:4806163;Name=YP_001035163.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate/ATP-NAD kinase;protein_id=YP_001035163.1;transl_table=11
NC_009009.1	RefSeq	gene	1234074	1234745	.	-	.	ID=gene1186;Dbxref=GeneID:4807586;Name=SSA_1210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1210
NC_009009.1	RefSeq	CDS	1234074	1234745	.	-	0	ID=cds1143;Parent=gene1186;Dbxref=Genbank:YP_001035164.1,GeneID:4807586;Name=YP_001035164.1;Note=GC: 43.45%25%3B Codon Adaptation Index (CAI): 0.805.;gbkey=CDS;product=GTP pyrophosphokinase;protein_id=YP_001035164.1;transl_table=11
NC_009009.1	RefSeq	gene	1234835	1235404	.	+	.	ID=gene1187;Dbxref=GeneID:4808090;Name=SSA_1211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1211
NC_009009.1	RefSeq	CDS	1234835	1235404	.	+	0	ID=cds1144;Parent=gene1187;Dbxref=Genbank:YP_001035165.1,GeneID:4808090;Name=YP_001035165.1;Note=GC: 40.7%25%3B Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035165.1;transl_table=11
NC_009009.1	RefSeq	gene	1235541	1236497	.	+	.	ID=gene1188;Dbxref=GeneID:4806569;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=SSA_1212
NC_009009.1	RefSeq	CDS	1235541	1236497	.	+	0	ID=cds1145;Parent=gene1188;Dbxref=Genbank:YP_001035166.1,GeneID:4806569;Name=YP_001035166.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;gene=prs;product=ribose-phosphate pyrophosphokinase;protein_id=YP_001035166.1;transl_table=11
NC_009009.1	RefSeq	gene	1236430	1237620	.	+	.	ID=gene1189;Dbxref=GeneID:4806306;Name=SSA_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1213
NC_009009.1	RefSeq	CDS	1236430	1237620	.	+	0	ID=cds1146;Parent=gene1189;Dbxref=Genbank:YP_001035167.1,GeneID:4806306;Name=YP_001035167.1;Note=GC: 42.74%25%3B Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=pyridoxal-phosphate dependent aminotransferase;protein_id=YP_001035167.1;transl_table=11
NC_009009.1	RefSeq	gene	1237622	1237969	.	+	.	ID=gene1190;Dbxref=GeneID:4806185;Name=SSA_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1214
NC_009009.1	RefSeq	CDS	1237622	1237969	.	+	0	ID=cds1147;Parent=gene1190;Dbxref=Genbank:YP_001035168.1,GeneID:4806185;Name=YP_001035168.1;Note=GC: 36.78%25%3B Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035168.1;transl_table=11
NC_009009.1	RefSeq	gene	1238086	1238307	.	+	.	ID=gene1191;Dbxref=GeneID:4806068;Name=SSA_1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1215
NC_009009.1	RefSeq	CDS	1238086	1238307	.	+	0	ID=cds1148;Parent=gene1191;Dbxref=Genbank:YP_001035169.1,GeneID:4806068;Name=YP_001035169.1;Note=GC: 43.69%25%3B Codon Adaptation Index (CAI): 0.757.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035169.1;transl_table=11
NC_009009.1	RefSeq	gene	1238432	1239079	.	+	.	ID=gene1192;Dbxref=GeneID:4807031;Name=SSA_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1216
NC_009009.1	RefSeq	CDS	1238432	1239079	.	+	0	ID=cds1149;Parent=gene1192;Dbxref=Genbank:YP_001035170.1,GeneID:4807031;Name=YP_001035170.1;Note=modulates transcription in response to the NADH/NAD(+) redox state;gbkey=CDS;product=redox-sensing transcriptional repressor Rex;protein_id=YP_001035170.1;transl_table=11
NC_009009.1	RefSeq	gene	1239104	1239796	.	+	.	ID=gene1193;Dbxref=GeneID:4806639;Name=SSA_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1217
NC_009009.1	RefSeq	CDS	1239104	1239796	.	+	0	ID=cds1150;Parent=gene1193;Dbxref=Genbank:YP_001035171.1,GeneID:4806639;Name=YP_001035171.1;Note=GC: 41.56%25%3B Codon Adaptation Index (CAI): 0.795.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035171.1;transl_table=11
NC_009009.1	RefSeq	gene	1239866	1240549	.	-	.	ID=gene1194;Dbxref=GeneID:4806123;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=SSA_1218
NC_009009.1	RefSeq	CDS	1239866	1240549	.	-	0	ID=cds1151;Parent=gene1194;Dbxref=Genbank:YP_001035172.1,GeneID:4806123;Name=YP_001035172.1;Note=Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase;gbkey=CDS;gene=radC;product=DNA repair protein RadC;protein_id=YP_001035172.1;transl_table=11
NC_009009.1	RefSeq	gene	1240672	1241427	.	-	.	ID=gene1195;Dbxref=GeneID:4807013;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=SSA_1219
NC_009009.1	RefSeq	CDS	1240672	1241427	.	-	0	ID=cds1152;Parent=gene1195;Dbxref=Genbank:YP_001035173.1,GeneID:4807013;Name=YP_001035173.1;Note=GC: 40.08%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.658).;gbkey=CDS;gene=srtA;product=sortase;protein_id=YP_001035173.1;transl_table=11
NC_009009.1	RefSeq	gene	1241442	1243922	.	-	.	ID=gene1196;Dbxref=GeneID:4806571;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=SSA_1220
NC_009009.1	RefSeq	CDS	1241442	1243922	.	-	0	ID=cds1153;Parent=gene1196;Dbxref=Genbank:YP_001035174.1,GeneID:4806571;Name=YP_001035174.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=YP_001035174.1;transl_table=11
NC_009009.1	RefSeq	gene	1244096	1245082	.	+	.	ID=gene1197;Dbxref=GeneID:4806667;Name=ldh;gbkey=Gene;gene=ldh;gene_biotype=protein_coding;locus_tag=SSA_1221
NC_009009.1	RefSeq	CDS	1244096	1245082	.	+	0	ID=cds1154;Parent=gene1197;Dbxref=Genbank:YP_001035175.1,GeneID:4806667;Name=YP_001035175.1;Note=Converts (S)-lactate and NAD(+) to pyruvate and NADH;gbkey=CDS;gene=ldh;product=L-lactate dehydrogenase;protein_id=YP_001035175.1;transl_table=11
NC_009009.1	RefSeq	gene	1245128	1245544	.	-	.	ID=gene1198;Dbxref=GeneID:4807263;Name=SSA_1222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1222
NC_009009.1	RefSeq	CDS	1245128	1245544	.	-	0	ID=cds1155;Parent=gene1198;Dbxref=Genbank:YP_001035176.1,GeneID:4807263;Name=YP_001035176.1;Note=GC: 38.85%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=NTP pyrophosphohydrolases including oxidative damage repair enzymes;protein_id=YP_001035176.1;transl_table=11
NC_009009.1	RefSeq	gene	1245602	1245673	.	-	.	ID=gene1199;Dbxref=GeneID:4806300;Name=SSA_2470;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2470
NC_009009.1	RefSeq	tRNA	1245602	1245673	.	-	.	ID=rna42;Parent=gene1199;Dbxref=GeneID:4806300;Note=tRNA-Arg_6;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	exon	1245602	1245673	.	-	.	ID=id43;Parent=rna42;Dbxref=GeneID:4806300;Note=tRNA-Arg_6;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	gene	1245757	1246962	.	-	.	ID=gene1200;Dbxref=GeneID:4806713;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SSA_1223
NC_009009.1	RefSeq	CDS	1245757	1246962	.	-	0	ID=cds1156;Parent=gene1200;Dbxref=Genbank:YP_001035177.1,GeneID:4806713;Name=YP_001035177.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=YP_001035177.1;transl_table=11
NC_009009.1	RefSeq	gene	1247126	1247197	.	-	.	ID=gene1201;Dbxref=GeneID:4806570;Name=SSA_2469;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2469
NC_009009.1	RefSeq	tRNA	1247126	1247197	.	-	.	ID=rna43;Parent=gene1201;Dbxref=GeneID:4806570;Note=tRNA-Gln_2;gbkey=tRNA;product=tRNA-Gln
NC_009009.1	RefSeq	exon	1247126	1247197	.	-	.	ID=id44;Parent=rna43;Dbxref=GeneID:4806570;Note=tRNA-Gln_2;gbkey=tRNA;product=tRNA-Gln
NC_009009.1	RefSeq	gene	1247211	1247291	.	-	.	ID=gene1202;Dbxref=GeneID:4806644;Name=SSA_2468;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2468
NC_009009.1	RefSeq	tRNA	1247211	1247291	.	-	.	ID=rna44;Parent=gene1202;Dbxref=GeneID:4806644;Note=tRNA-Tyr_2;gbkey=tRNA;product=tRNA-Tyr
NC_009009.1	RefSeq	exon	1247211	1247291	.	-	.	ID=id45;Parent=rna44;Dbxref=GeneID:4806644;Note=tRNA-Tyr_2;gbkey=tRNA;product=tRNA-Tyr
NC_009009.1	RefSeq	gene	1247341	1247571	.	-	.	ID=gene1203;Dbxref=GeneID:4806753;Name=SSA_1224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1224
NC_009009.1	RefSeq	CDS	1247341	1247571	.	-	0	ID=cds1157;Parent=gene1203;Dbxref=Genbank:YP_001035178.1,GeneID:4806753;Name=YP_001035178.1;Note=GC: 33.77%25%3B Codon Adaptation Index (CAI): 0.821.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035178.1;transl_table=11
NC_009009.1	RefSeq	gene	1247679	1248698	.	-	.	ID=gene1204;Dbxref=GeneID:4806176;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=SSA_1225
NC_009009.1	RefSeq	CDS	1247679	1248698	.	-	0	ID=cds1158;Parent=gene1204;Dbxref=Genbank:YP_001035179.1,GeneID:4806176;Name=YP_001035179.1;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=YP_001035179.1;transl_table=11
NC_009009.1	RefSeq	gene	1248873	1251323	.	-	.	ID=gene1205;Dbxref=GeneID:4805974;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=SSA_1226
NC_009009.1	RefSeq	CDS	1248873	1251323	.	-	0	ID=cds1159;Parent=gene1205;Dbxref=Genbank:YP_001035180.1,GeneID:4805974;Name=YP_001035180.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parC;product=DNA topoisomerase IV subunit A;protein_id=YP_001035180.1;transl_table=11
NC_009009.1	RefSeq	gene	1251569	1252387	.	-	.	ID=gene1206;Dbxref=GeneID:4805838;Name=SSA_1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1227
NC_009009.1	RefSeq	CDS	1251569	1252387	.	-	0	ID=cds1160;Parent=gene1206;Dbxref=Genbank:YP_001035181.1,GeneID:4805838;Name=YP_001035181.1;Note=GC: 47.62%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;product=aminoglycoside adenylyltransferase;protein_id=YP_001035181.1;transl_table=11
NC_009009.1	RefSeq	gene	1252404	1252511	.	-	.	ID=gene1207;Dbxref=GeneID:4806060;Name=SSA_1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1229
NC_009009.1	RefSeq	CDS	1252404	1252511	.	-	0	ID=cds1161;Parent=gene1207;Dbxref=Genbank:YP_001035182.1,GeneID:4806060;Name=YP_001035182.1;Note=GC: 39.81%25%3B Codon Adaptation Index (CAI): 0.755.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035182.1;transl_table=11
NC_009009.1	RefSeq	gene	1252702	1253448	.	-	.	ID=gene1208;Dbxref=GeneID:4806530;Name=SSA_1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1230
NC_009009.1	RefSeq	CDS	1252702	1253448	.	-	0	ID=cds1162;Parent=gene1208;Dbxref=Genbank:YP_001035183.1,GeneID:4806530;Name=YP_001035183.1;Note=GC: 48.73%25%3B Codon Adaptation Index (CAI): 0.77.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035183.1;transl_table=11
NC_009009.1	RefSeq	gene	1253739	1254848	.	-	.	ID=gene1209;Dbxref=GeneID:4806220;Name=SSA_1231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1231
NC_009009.1	RefSeq	CDS	1253739	1254848	.	-	0	ID=cds1163;Parent=gene1209;Dbxref=Genbank:YP_001035184.1,GeneID:4806220;Name=YP_001035184.1;Note=GC: 30%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.715. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035184.1;transl_table=11
NC_009009.1	RefSeq	gene	1254896	1256845	.	-	.	ID=gene1210;Dbxref=GeneID:4805850;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=SSA_1232
NC_009009.1	RefSeq	CDS	1254896	1256845	.	-	0	ID=cds1164;Parent=gene1210;Dbxref=Genbank:YP_001035185.1,GeneID:4805850;Name=YP_001035185.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parE;product=DNA topoisomerase IV subunit B;protein_id=YP_001035185.1;transl_table=11
NC_009009.1	RefSeq	gene	1257036	1257686	.	+	.	ID=gene1211;Dbxref=GeneID:4806041;Name=SSA_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1233
NC_009009.1	RefSeq	CDS	1257036	1257686	.	+	0	ID=cds1165;Parent=gene1211;Dbxref=Genbank:YP_001035186.1,GeneID:4806041;Name=YP_001035186.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase PlsY;protein_id=YP_001035186.1;transl_table=11
NC_009009.1	RefSeq	gene	1257726	1259885	.	-	.	ID=gene1212;Dbxref=GeneID:4806198;Name=SSA_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1234
NC_009009.1	RefSeq	CDS	1257726	1259885	.	-	0	ID=cds1166;Parent=gene1212;Dbxref=Genbank:YP_001035187.1,GeneID:4806198;Name=YP_001035187.1;Note=GC: 47.41%25%3B Codon Adaptation Index (CAI): 0.789. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=5'-nucleotidase;protein_id=YP_001035187.1;transl_table=11
NC_009009.1	RefSeq	gene	1260049	1261317	.	-	.	ID=gene1213;Dbxref=GeneID:4807796;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=SSA_1235
NC_009009.1	RefSeq	CDS	1260049	1261317	.	-	0	ID=cds1167;Parent=gene1213;Dbxref=Genbank:YP_001035188.1,GeneID:4807796;Name=YP_001035188.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrC;product=dihydroorotase;protein_id=YP_001035188.1;transl_table=11
NC_009009.1	RefSeq	gene	1261330	1261794	.	-	.	ID=gene1214;Dbxref=GeneID:4806080;Name=mutX;gbkey=Gene;gene=mutX;gene_biotype=protein_coding;locus_tag=SSA_1236
NC_009009.1	RefSeq	CDS	1261330	1261794	.	-	0	ID=cds1168;Parent=gene1214;Dbxref=Genbank:YP_001035189.1,GeneID:4806080;Name=YP_001035189.1;Note=GC: 46.24%25%3B Codon Adaptation Index (CAI): 0.785.;gbkey=CDS;gene=mutX;product=Mutator protein;protein_id=YP_001035189.1;transl_table=11
NC_009009.1	RefSeq	gene	1261803	1262456	.	-	.	ID=gene1215;Dbxref=GeneID:4806385;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=SSA_1237
NC_009009.1	RefSeq	CDS	1261803	1262456	.	-	0	ID=cds1169;Parent=gene1215;Dbxref=Genbank:YP_001035190.1,GeneID:4806385;Name=YP_001035190.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;gene=ung;product=uracil-DNA glycosylase;protein_id=YP_001035190.1;transl_table=11
NC_009009.1	RefSeq	gene	1262492	1263244	.	-	.	ID=gene1216;Dbxref=GeneID:4806093;Name=SSA_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1238
NC_009009.1	RefSeq	CDS	1262492	1263244	.	-	0	ID=cds1170;Parent=gene1216;Dbxref=Genbank:YP_001035191.1,GeneID:4806093;Name=YP_001035191.1;Note=GC: 43.69%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035191.1;transl_table=11
NC_009009.1	RefSeq	gene	1263241	1264779	.	-	.	ID=gene1217;Dbxref=GeneID:4806042;Name=SSA_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1239
NC_009009.1	RefSeq	CDS	1263241	1264779	.	-	0	ID=cds1171;Parent=gene1217;Dbxref=Genbank:YP_001035192.1,GeneID:4806042;Name=YP_001035192.1;Note=GC: 41.91%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035192.1;transl_table=11
NC_009009.1	RefSeq	gene	1264891	1265520	.	-	.	ID=gene1218;Dbxref=GeneID:4806144;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SSA_1240
NC_009009.1	RefSeq	CDS	1264891	1265520	.	-	0	ID=cds1172;Parent=gene1218;Dbxref=Genbank:YP_001035193.1,GeneID:4806144;Name=YP_001035193.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=YP_001035193.1;transl_table=11
NC_009009.1	RefSeq	gene	1265599	1266291	.	-	.	ID=gene1219;Dbxref=GeneID:4805789;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=SSA_1241
NC_009009.1	RefSeq	CDS	1265599	1266291	.	-	0	ID=cds1173;Parent=gene1219;Dbxref=Genbank:YP_001035194.1,GeneID:4805789;Name=YP_001035194.1;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=YP_001035194.1;transl_table=11
NC_009009.1	RefSeq	gene	1266538	1267476	.	-	.	ID=gene1220;Dbxref=GeneID:4806007;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=SSA_1242
NC_009009.1	RefSeq	CDS	1266538	1267476	.	-	0	ID=cds1174;Parent=gene1220;Dbxref=Genbank:YP_001035195.1,GeneID:4806007;Name=YP_001035195.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%2C using a flavin nucleotide as an essential cofactor%3B subclass 1B is a heterotetramer consisting of two PyrDB subunits%2C similar to the PyrDA subunits and two PyrK subunits;gbkey=CDS;gene=pyrD;product=dihydroorotate dehydrogenase 1B;protein_id=YP_001035195.1;transl_table=11
NC_009009.1	RefSeq	gene	1267488	1268294	.	-	.	ID=gene1221;Dbxref=GeneID:4805775;Name=pyrK;gbkey=Gene;gene=pyrK;gene_biotype=protein_coding;locus_tag=SSA_1243
NC_009009.1	RefSeq	CDS	1267488	1268294	.	-	0	ID=cds1175;Parent=gene1221;Dbxref=Genbank:YP_001035196.1,GeneID:4805775;Name=YP_001035196.1;Note=responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+);gbkey=CDS;gene=pyrK;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=YP_001035196.1;transl_table=11
NC_009009.1	RefSeq	gene	1268555	1268794	.	-	.	ID=gene1222;Dbxref=GeneID:4806097;Name=SSA_1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1244
NC_009009.1	RefSeq	CDS	1268555	1268794	.	-	0	ID=cds1176;Parent=gene1222;Dbxref=Genbank:YP_001035197.1,GeneID:4806097;Name=YP_001035197.1;Note=GC: 38.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.742. SignalP prediction: Yes (prob. 0.456).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035197.1;transl_table=11
NC_009009.1	RefSeq	gene	1268862	1269770	.	+	.	ID=gene1223;Dbxref=GeneID:4806434;Name=cpsY;gbkey=Gene;gene=cpsY;gene_biotype=protein_coding;locus_tag=SSA_1245
NC_009009.1	RefSeq	CDS	1268862	1269770	.	+	0	ID=cds1177;Parent=gene1223;Dbxref=Genbank:YP_001035198.1,GeneID:4806434;Name=YP_001035198.1;Note=GC: 44.55%25%3B Codon Adaptation Index (CAI): 0.758. Helix-turn-helix prediction: LysR. Possible capsular polysaccharide biosynthesis regulator. Curator(s): J. Alves;gbkey=CDS;gene=cpsY;product=LysR family transcriptional regulator;protein_id=YP_001035198.1;transl_table=11
NC_009009.1	RefSeq	gene	1269888	1271315	.	-	.	ID=gene1224;Dbxref=GeneID:4806156;Name=SSA_1246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1246
NC_009009.1	RefSeq	CDS	1269888	1271315	.	-	0	ID=cds1178;Parent=gene1224;Dbxref=Genbank:YP_001035199.1,GeneID:4806156;Name=YP_001035199.1;Note=GC: 33.05%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035199.1;transl_table=11
NC_009009.1	RefSeq	gene	1271312	1272448	.	-	.	ID=gene1225;Dbxref=GeneID:4806212;Name=SSA_1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1247
NC_009009.1	RefSeq	CDS	1271312	1272448	.	-	0	ID=cds1179;Parent=gene1225;Dbxref=Genbank:YP_001035200.1,GeneID:4806212;Name=YP_001035200.1;Note=GC: 37.64%25%3B Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035200.1;transl_table=11
NC_009009.1	RefSeq	gene	1272445	1273353	.	-	.	ID=gene1226;Dbxref=GeneID:4808024;Name=SSA_1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1248
NC_009009.1	RefSeq	CDS	1272445	1273353	.	-	0	ID=cds1180;Parent=gene1226;Dbxref=Genbank:YP_001035201.1,GeneID:4808024;Name=YP_001035201.1;Note=GC: 38.5%25%3B Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035201.1;transl_table=11
NC_009009.1	RefSeq	gene	1273365	1274075	.	-	.	ID=gene1227;Dbxref=GeneID:4807358;Name=SSA_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1249
NC_009009.1	RefSeq	CDS	1273365	1274075	.	-	0	ID=cds1181;Parent=gene1227;Dbxref=Genbank:YP_001035202.1,GeneID:4807358;Name=YP_001035202.1;Note=GC: 37.13%25%3B Codon Adaptation Index (CAI): 0.817. SignalP prediction: Yes (prob. 0.597).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035202.1;transl_table=11
NC_009009.1	RefSeq	gene	1274072	1274602	.	-	.	ID=gene1228;Dbxref=GeneID:4807784;Name=SSA_1250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1250
NC_009009.1	RefSeq	CDS	1274072	1274602	.	-	0	ID=cds1182;Parent=gene1228;Dbxref=Genbank:YP_001035203.1,GeneID:4807784;Name=YP_001035203.1;Note=GC: 32.2%25%3B Codon Adaptation Index (CAI): 0.764. Possibly involved in DNA repair. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035203.1;transl_table=11
NC_009009.1	RefSeq	gene	1274583	1276880	.	-	.	ID=gene1229;Dbxref=GeneID:4806321;Name=SSA_1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1251
NC_009009.1	RefSeq	CDS	1274583	1276880	.	-	0	ID=cds1183;Parent=gene1229;Dbxref=Genbank:YP_001035204.1,GeneID:4806321;Name=YP_001035204.1;Note=GC: 40.86%25%3B Codon Adaptation Index (CAI): 0.785. Curator(s): J. Alves;gbkey=CDS;product=HD superfamily hydrolase;protein_id=YP_001035204.1;transl_table=11
NC_009009.1	RefSeq	gene	1276861	1277595	.	-	.	ID=gene1230;Dbxref=GeneID:4806646;Name=SSA_1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1252
NC_009009.1	RefSeq	CDS	1276861	1277595	.	-	0	ID=cds1184;Parent=gene1230;Dbxref=Genbank:YP_001035205.1,GeneID:4806646;Name=YP_001035205.1;Note=GC: 45.31%25%3B Codon Adaptation Index (CAI): 0.706. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035205.1;transl_table=11
NC_009009.1	RefSeq	gene	1281066	1281335	.	-	.	ID=gene1231;Dbxref=GeneID:4806589;Name=SSA_1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1253
NC_009009.1	RefSeq	CDS	1281066	1281335	.	-	0	ID=cds1185;Parent=gene1231;Dbxref=Genbank:YP_001035206.1,GeneID:4806589;Name=YP_001035206.1;Note=GC: 34.07%25%3B Codon Adaptation Index (CAI): 0.753.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035206.1;transl_table=11
NC_009009.1	RefSeq	gene	1281332	1281574	.	-	.	ID=gene1232;Dbxref=GeneID:4807768;Name=SSA_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1254
NC_009009.1	RefSeq	CDS	1281332	1281574	.	-	0	ID=cds1186;Parent=gene1232;Dbxref=Genbank:YP_001035207.1,GeneID:4807768;Name=YP_001035207.1;Note=GC: 40.33%25%3B Codon Adaptation Index (CAI): 0.743.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035207.1;transl_table=11
NC_009009.1	RefSeq	gene	1281546	1282334	.	-	.	ID=gene1233;Dbxref=GeneID:4807771;Name=SSA_1255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1255
NC_009009.1	RefSeq	CDS	1281546	1282334	.	-	0	ID=cds1187;Parent=gene1233;Dbxref=Genbank:YP_001035208.1,GeneID:4807771;Name=YP_001035208.1;Note=GC: 38.02%25%3B Codon Adaptation Index (CAI): 0.749. Helix-turn-helix prediction: AraC. Possibly involved in DNA repair.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035208.1;transl_table=11
NC_009009.1	RefSeq	gene	1282447	1283184	.	-	.	ID=gene1234;Dbxref=GeneID:4806780;Name=SSA_1256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1256
NC_009009.1	RefSeq	CDS	1282447	1283184	.	-	0	ID=cds1188;Parent=gene1234;Dbxref=Genbank:YP_001035209.1,GeneID:4806780;Name=YP_001035209.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=YP_001035209.1;transl_table=11
NC_009009.1	RefSeq	gene	1283196	1283957	.	-	.	ID=gene1235;Dbxref=GeneID:4806063;Name=SSA_1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1257
NC_009009.1	RefSeq	CDS	1283196	1283957	.	-	0	ID=cds1189;Parent=gene1235;Dbxref=Genbank:YP_001035210.1,GeneID:4806063;Name=YP_001035210.1;Note=GC: 43.04%25%3B Codon Adaptation Index (CAI): 0.748. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035210.1;transl_table=11
NC_009009.1	RefSeq	gene	1283948	1284742	.	-	.	ID=gene1236;Dbxref=GeneID:4805952;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SSA_1258
NC_009009.1	RefSeq	CDS	1283948	1284742	.	-	0	ID=cds1190;Parent=gene1236;Dbxref=Genbank:YP_001035211.1,GeneID:4805952;Name=YP_001035211.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=YP_001035211.1;transl_table=11
NC_009009.1	RefSeq	gene	1285000	1285812	.	-	.	ID=gene1237;Dbxref=GeneID:4806020;Name=punA;gbkey=Gene;gene=punA;gene_biotype=protein_coding;locus_tag=SSA_1259
NC_009009.1	RefSeq	CDS	1285000	1285812	.	-	0	ID=cds1191;Parent=gene1237;Dbxref=Genbank:YP_001035212.1,GeneID:4806020;Name=YP_001035212.1;Note=catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation;gbkey=CDS;gene=punA;product=purine nucleoside phosphorylase;protein_id=YP_001035212.1;transl_table=11
NC_009009.1	RefSeq	gene	1285842	1287053	.	-	.	ID=gene1238;Dbxref=GeneID:4807691;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=SSA_1260
NC_009009.1	RefSeq	CDS	1285842	1287053	.	-	0	ID=cds1192;Parent=gene1238;Dbxref=Genbank:YP_001035213.1,GeneID:4807691;Name=YP_001035213.1;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;gbkey=CDS;gene=deoB;product=phosphopentomutase;protein_id=YP_001035213.1;transl_table=11
NC_009009.1	RefSeq	gene	1287067	1287744	.	-	.	ID=gene1239;Dbxref=GeneID:4807762;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=SSA_1261
NC_009009.1	RefSeq	CDS	1287067	1287744	.	-	0	ID=cds1193;Parent=gene1239;Dbxref=Genbank:YP_001035214.1,GeneID:4807762;Name=YP_001035214.1;Note=Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;gene=rpiA;product=ribose-5-phosphate isomerase A;protein_id=YP_001035214.1;transl_table=11
NC_009009.1	RefSeq	gene	1287922	1289295	.	+	.	ID=gene1240;Dbxref=GeneID:4808045;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=SSA_1262
NC_009009.1	RefSeq	CDS	1287922	1289295	.	+	0	ID=cds1194;Parent=gene1240;Dbxref=Genbank:YP_001035215.1,GeneID:4808045;Name=YP_001035215.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=YP_001035215.1;transl_table=11
NC_009009.1	RefSeq	gene	1289395	1290132	.	-	.	ID=gene1241;Dbxref=GeneID:4806636;Name=SSA_1264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1264
NC_009009.1	RefSeq	CDS	1289395	1290132	.	-	0	ID=cds1195;Parent=gene1241;Dbxref=Genbank:YP_001035216.1,GeneID:4806636;Name=YP_001035216.1;Note=GC: 40.65%25%3B Codon Adaptation Index (CAI): 0.791.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035216.1;transl_table=11
NC_009009.1	RefSeq	gene	1290162	1290233	.	-	.	ID=gene1242;Dbxref=GeneID:4805908;Name=SSA_2467;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2467
NC_009009.1	RefSeq	tRNA	1290162	1290233	.	-	.	ID=rna45;Parent=gene1242;Dbxref=GeneID:4805908;Note=tRNA-Arg_5;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	exon	1290162	1290233	.	-	.	ID=id46;Parent=rna45;Dbxref=GeneID:4805908;Note=tRNA-Arg_5;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	gene	1290274	1290657	.	-	.	ID=gene1243;Dbxref=GeneID:4807773;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SSA_1265
NC_009009.1	RefSeq	CDS	1290274	1290657	.	-	0	ID=cds1196;Parent=gene1243;Dbxref=Genbank:YP_001035217.1,GeneID:4807773;Name=YP_001035217.1;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=YP_001035217.1;transl_table=11
NC_009009.1	RefSeq	gene	1290740	1291090	.	-	.	ID=gene1244;Dbxref=GeneID:4806474;Name=crcB1;gbkey=Gene;gene=crcB1;gene_biotype=protein_coding;locus_tag=SSA_1266
NC_009009.1	RefSeq	CDS	1290740	1291090	.	-	0	ID=cds1197;Parent=gene1244;Dbxref=Genbank:YP_001035218.1,GeneID:4806474;Name=YP_001035218.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=crcB1;product=camphor resistance protein CrcB;protein_id=YP_001035218.1;transl_table=11
NC_009009.1	RefSeq	gene	1291063	1291437	.	-	.	ID=gene1245;Dbxref=GeneID:4806485;Name=crcB2;gbkey=Gene;gene=crcB2;gene_biotype=protein_coding;locus_tag=SSA_1267
NC_009009.1	RefSeq	CDS	1291063	1291437	.	-	0	ID=cds1198;Parent=gene1245;Dbxref=Genbank:YP_001035219.1,GeneID:4806485;Name=YP_001035219.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=crcB2;product=camphor resistance protein CrcB;protein_id=YP_001035219.1;transl_table=11
NC_009009.1	RefSeq	gene	1291437	1291700	.	-	.	ID=gene1246;Dbxref=GeneID:4806595;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=SSA_1268
NC_009009.1	RefSeq	CDS	1291437	1291700	.	-	0	ID=cds1199;Parent=gene1246;Dbxref=Genbank:YP_001035220.1,GeneID:4806595;Name=YP_001035220.1;Note=GC: 39.02%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;gene=aroH;product=hypothetical protein;protein_id=YP_001035220.1;transl_table=11
NC_009009.1	RefSeq	gene	1292060	1293442	.	-	.	ID=gene1247;Dbxref=GeneID:4806204;Name=SSA_1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1269
NC_009009.1	RefSeq	CDS	1292060	1293442	.	-	0	ID=cds1200;Parent=gene1247;Dbxref=Genbank:YP_001035221.1,GeneID:4806204;Name=YP_001035221.1;Note=GC: 45.41%25%3B Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035221.1;transl_table=11
NC_009009.1	RefSeq	gene	1293566	1294006	.	-	.	ID=gene1248;Dbxref=GeneID:4806304;Name=flaV;gbkey=Gene;gene=flaV;gene_biotype=protein_coding;locus_tag=SSA_1270
NC_009009.1	RefSeq	CDS	1293566	1294006	.	-	0	ID=cds1201;Parent=gene1248;Dbxref=Genbank:YP_001035222.1,GeneID:4806304;Name=YP_001035222.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;gene=flaV;product=flavodoxin;protein_id=YP_001035222.1;transl_table=11
NC_009009.1	RefSeq	gene	1294112	1295047	.	+	.	ID=gene1249;Dbxref=GeneID:4806746;Name=SSA_1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1271
NC_009009.1	RefSeq	CDS	1294112	1295047	.	+	0	ID=cds1202;Parent=gene1249;Dbxref=Genbank:YP_001035223.1,GeneID:4806746;Name=YP_001035223.1;Note=GC: 46.15%25%3B Codon Adaptation Index (CAI): 0.775.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035223.1;transl_table=11
NC_009009.1	RefSeq	gene	1295155	1295397	.	+	.	ID=gene1250;Dbxref=GeneID:4806033;Name=rpmE2;gbkey=Gene;gene=rpmE2;gene_biotype=protein_coding;locus_tag=SSA_1272
NC_009009.1	RefSeq	CDS	1295155	1295397	.	+	0	ID=cds1203;Parent=gene1250;Dbxref=Genbank:YP_001035224.1,GeneID:4806033;Name=YP_001035224.1;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE2;product=50S ribosomal protein L31;protein_id=YP_001035224.1;transl_table=11
NC_009009.1	RefSeq	gene	1295607	1297544	.	-	.	ID=gene1251;Dbxref=GeneID:4805765;Name=SSA_1274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1274
NC_009009.1	RefSeq	CDS	1295607	1297544	.	-	0	ID=cds1204;Parent=gene1251;Dbxref=Genbank:YP_001035225.1,GeneID:4805765;Name=YP_001035225.1;Note=GC: 39.32%25%3B Codon Adaptation Index (CAI): 0.804. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035225.1;transl_table=11
NC_009009.1	RefSeq	gene	1297598	1297696	.	-	.	ID=gene1252;Dbxref=GeneID:4805875;Name=SSA_1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1275
NC_009009.1	RefSeq	CDS	1297598	1297696	.	-	0	ID=cds1205;Parent=gene1252;Dbxref=Genbank:YP_001035226.1,GeneID:4805875;Name=YP_001035226.1;Note=GC: 34.34%25%3B Codon Adaptation Index (CAI): 0.823.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035226.1;transl_table=11
NC_009009.1	RefSeq	gene	1298246	1298536	.	-	.	ID=gene1253;Dbxref=GeneID:4806085;Name=SSA_1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1276
NC_009009.1	RefSeq	CDS	1298246	1298536	.	-	0	ID=cds1206;Parent=gene1253;Dbxref=Genbank:YP_001035227.1,GeneID:4806085;Name=YP_001035227.1;Note=GC: 43.64%25%3B Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035227.1;transl_table=11
NC_009009.1	RefSeq	gene	1298566	1299306	.	-	.	ID=gene1254;Dbxref=GeneID:4806379;Name=SSA_1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1277
NC_009009.1	RefSeq	CDS	1298566	1299306	.	-	0	ID=cds1207;Parent=gene1254;Dbxref=Genbank:YP_001035228.1,GeneID:4806379;Name=YP_001035228.1;Note=GC: 42.91%25%3B Codon Adaptation Index (CAI): 0.784. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_001035228.1;transl_table=11
NC_009009.1	RefSeq	gene	1299653	1299967	.	-	.	ID=gene1255;Dbxref=GeneID:4806423;Name=SSA_1278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1278
NC_009009.1	RefSeq	CDS	1299653	1299967	.	-	0	ID=cds1208;Parent=gene1255;Dbxref=Genbank:YP_001035229.1,GeneID:4806423;Name=YP_001035229.1;Note=GC: 41.27%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=rhodanese-like domain-containing protein;protein_id=YP_001035229.1;transl_table=11
NC_009009.1	RefSeq	gene	1299960	1300922	.	-	.	ID=gene1256;Dbxref=GeneID:4806164;Name=SSA_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1279
NC_009009.1	RefSeq	CDS	1299960	1300922	.	-	0	ID=cds1209;Parent=gene1256;Dbxref=Genbank:YP_001035230.1,GeneID:4806164;Name=YP_001035230.1;Note=GC: 47.14%25%3B Codon Adaptation Index (CAI): 0.756.;gbkey=CDS;product=oxidoreductase;protein_id=YP_001035230.1;transl_table=11
NC_009009.1	RefSeq	gene	1301198	1301686	.	-	.	ID=gene1257;Dbxref=GeneID:4806099;Name=SSA_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1280
NC_009009.1	RefSeq	CDS	1301198	1301686	.	-	0	ID=cds1210;Parent=gene1257;Dbxref=Genbank:YP_001035231.1,GeneID:4806099;Name=YP_001035231.1;Note=GC: 41.51%25%3B Codon Adaptation Index (CAI): 0.8.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035231.1;transl_table=11
NC_009009.1	RefSeq	gene	1301698	1302282	.	-	.	ID=gene1258;Dbxref=GeneID:4806074;Name=SSA_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1281
NC_009009.1	RefSeq	CDS	1301698	1302282	.	-	0	ID=cds1211;Parent=gene1258;Dbxref=Genbank:YP_001035232.1,GeneID:4806074;Name=YP_001035232.1;Note=GC: 43.08%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): J. Alves;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=YP_001035232.1;transl_table=11
NC_009009.1	RefSeq	gene	1302336	1303742	.	-	.	ID=gene1259;Dbxref=GeneID:4806030;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=SSA_1282
NC_009009.1	RefSeq	CDS	1302336	1303742	.	-	0	ID=cds1212;Parent=gene1259;Dbxref=Genbank:YP_001035233.2,GeneID:4806030;Name=YP_001035233.2;Note=divalent metal ion-dependent extracellular dipeptidase%3B able to hydrolyze a broad range of dipeptides but no tri-%2C tetra-%2C or larger oligopeptides%3B differences in the amino acid specificity of the cleavage site varies between species%3B similar to succinyl-diaminopimelate desuccinylases;gbkey=CDS;gene=pepV;product=dipeptidase PepV;protein_id=YP_001035233.2;transl_table=11
NC_009009.1	RefSeq	gene	1303812	1304426	.	-	.	ID=gene1260;Dbxref=GeneID:4806205;Name=nrd;gbkey=Gene;gene=nrd;gene_biotype=protein_coding;locus_tag=SSA_1283
NC_009009.1	RefSeq	CDS	1303812	1304426	.	-	0	ID=cds1213;Parent=gene1260;Dbxref=Genbank:YP_001035234.1,GeneID:4806205;Name=YP_001035234.1;Note=GC: 42.76%25%3B Codon Adaptation Index (CAI): 0.81.;gbkey=CDS;gene=nrd;product=nitroreductase;protein_id=YP_001035234.1;transl_table=11
NC_009009.1	RefSeq	gene	1304536	1305069	.	-	.	ID=gene1261;Dbxref=GeneID:4806242;Name=SSA_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1284
NC_009009.1	RefSeq	CDS	1304536	1305069	.	-	0	ID=cds1214;Parent=gene1261;Dbxref=Genbank:YP_001035235.1,GeneID:4806242;Name=YP_001035235.1;Note=GC: 32.02%25%3B Codon Adaptation Index (CAI): 0.757. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035235.1;transl_table=11
NC_009009.1	RefSeq	gene	1305083	1305559	.	-	.	ID=gene1262;Dbxref=GeneID:4806383;Name=SSA_1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1285
NC_009009.1	RefSeq	CDS	1305083	1305559	.	-	0	ID=cds1215;Parent=gene1262;Dbxref=Genbank:YP_001035236.1,GeneID:4806383;Name=YP_001035236.1;Note=GC: 28.51%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035236.1;transl_table=11
NC_009009.1	RefSeq	gene	1305849	1306334	.	-	.	ID=gene1263;Dbxref=GeneID:4807915;Name=SSA_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1286
NC_009009.1	RefSeq	CDS	1305849	1306334	.	-	0	ID=cds1216;Parent=gene1263;Dbxref=Genbank:YP_001035237.1,GeneID:4807915;Name=YP_001035237.1;Note=GC: 29.22%25%3B Codon Adaptation Index (CAI): 0.751. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035237.1;transl_table=11
NC_009009.1	RefSeq	gene	1306345	1306827	.	-	.	ID=gene1264;Dbxref=GeneID:4807685;Name=SSA_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1287
NC_009009.1	RefSeq	CDS	1306345	1306827	.	-	0	ID=cds1217;Parent=gene1264;Dbxref=Genbank:YP_001035238.1,GeneID:4807685;Name=YP_001035238.1;Note=GC: 29.61%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035238.1;transl_table=11
NC_009009.1	RefSeq	gene	1307186	1307668	.	-	.	ID=gene1265;Dbxref=GeneID:4806516;Name=SSA_1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1288
NC_009009.1	RefSeq	CDS	1307186	1307668	.	-	0	ID=cds1218;Parent=gene1265;Dbxref=Genbank:YP_001035239.1,GeneID:4806516;Name=YP_001035239.1;Note=GC: 30.23%25%3B Codon Adaptation Index (CAI): 0.74. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035239.1;transl_table=11
NC_009009.1	RefSeq	gene	1307999	1308475	.	-	.	ID=gene1266;Dbxref=GeneID:4806347;Name=SSA_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1289
NC_009009.1	RefSeq	CDS	1307999	1308475	.	-	0	ID=cds1219;Parent=gene1266;Dbxref=Genbank:YP_001035240.1,GeneID:4806347;Name=YP_001035240.1;Note=GC: 29.14%25%3B Codon Adaptation Index (CAI): 0.776. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035240.1;transl_table=11
NC_009009.1	RefSeq	gene	1309081	1311192	.	-	.	ID=gene1267;Dbxref=GeneID:4806774;Name=SSA_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1291
NC_009009.1	RefSeq	CDS	1309081	1311192	.	-	0	ID=cds1220;Parent=gene1267;Dbxref=Genbank:YP_001035241.1,GeneID:4806774;Name=YP_001035241.1;Note=GC: 43.75%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035241.1;transl_table=11
NC_009009.1	RefSeq	gene	1311189	1311668	.	-	.	ID=gene1268;Dbxref=GeneID:4806433;Name=SSA_1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1292
NC_009009.1	RefSeq	CDS	1311189	1311668	.	-	0	ID=cds1221;Parent=gene1268;Dbxref=Genbank:YP_001035242.1,GeneID:4806433;Name=YP_001035242.1;Note=GC: 42.71%25%3B Codon Adaptation Index (CAI): 0.76. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035242.1;transl_table=11
NC_009009.1	RefSeq	gene	1311644	1312339	.	-	.	ID=gene1269;Dbxref=GeneID:4806296;Name=SSA_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1293
NC_009009.1	RefSeq	CDS	1311644	1312339	.	-	0	ID=cds1222;Parent=gene1269;Dbxref=Genbank:YP_001035243.1,GeneID:4806296;Name=YP_001035243.1;Note=GC: 39.22%25%3B Codon Adaptation Index (CAI): 0.739. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035243.1;transl_table=11
NC_009009.1	RefSeq	gene	1312336	1312671	.	-	.	ID=gene1270;Dbxref=GeneID:4806407;Name=SSA_1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1294
NC_009009.1	RefSeq	CDS	1312336	1312671	.	-	0	ID=cds1223;Parent=gene1270;Dbxref=Genbank:YP_001035244.1,GeneID:4806407;Name=YP_001035244.1;Note=GC: 36.9%25%3B Codon Adaptation Index (CAI): 0.792. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035244.1;transl_table=11
NC_009009.1	RefSeq	gene	1312672	1313103	.	-	.	ID=gene1271;Dbxref=GeneID:4805854;Name=SSA_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1296
NC_009009.1	RefSeq	CDS	1312672	1313103	.	-	0	ID=cds1224;Parent=gene1271;Dbxref=Genbank:YP_001035245.1,GeneID:4805854;Name=YP_001035245.1;Note=GC: 36.81%25%3B Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035245.1;transl_table=11
NC_009009.1	RefSeq	gene	1313231	1315066	.	-	.	ID=gene1272;Dbxref=GeneID:4807281;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SSA_1297
NC_009009.1	RefSeq	CDS	1313231	1315066	.	-	0	ID=cds1225;Parent=gene1272;Dbxref=Genbank:YP_001035246.1,GeneID:4807281;Name=YP_001035246.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=YP_001035246.1;transl_table=11
NC_009009.1	RefSeq	gene	1315431	1316687	.	+	.	ID=gene1273;Dbxref=GeneID:4805800;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=SSA_1298
NC_009009.1	RefSeq	CDS	1315431	1316687	.	+	0	ID=cds1226;Parent=gene1273;Dbxref=Genbank:YP_001035247.1,GeneID:4805800;Name=YP_001035247.1;Note=GC: 42.32%25%3B Transporter classification TC:3.A.1.1.6. Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=malX;product=maltose/maltodextrin ABC transporter sugar-binding protein MalX;protein_id=YP_001035247.1;transl_table=11
NC_009009.1	RefSeq	gene	1316769	1318127	.	+	.	ID=gene1274;Dbxref=GeneID:4806044;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=SSA_1299
NC_009009.1	RefSeq	CDS	1316769	1318127	.	+	0	ID=cds1227;Parent=gene1274;Dbxref=Genbank:YP_001035248.1,GeneID:4806044;Name=YP_001035248.1;Note=GC: 44.52%25%3B Transporter classification TC:3.A.1.1.6. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.76.;gbkey=CDS;gene=malF;product=maltose/maltodextrin ABC transport system;protein_id=YP_001035248.1;transl_table=11
NC_009009.1	RefSeq	gene	1318127	1318963	.	+	.	ID=gene1275;Dbxref=GeneID:4806160;Name=SSA_1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1300
NC_009009.1	RefSeq	CDS	1318127	1318963	.	+	0	ID=cds1228;Parent=gene1275;Dbxref=Genbank:YP_001035249.1,GeneID:4806160;Name=YP_001035249.1;Note=GC: 40.74%25%3B Transporter classification TC:3.A.1.1.6. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.753. SignalP prediction: Yes (prob. 0.98).;gbkey=CDS;product=maltose ABC transporter permease;protein_id=YP_001035249.1;transl_table=11
NC_009009.1	RefSeq	gene	1319100	1321661	.	-	.	ID=gene1276;Dbxref=GeneID:4805987;Name=SSA_1301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1301
NC_009009.1	RefSeq	CDS	1319100	1321661	.	-	0	ID=cds1229;Parent=gene1276;Dbxref=Genbank:YP_001035250.1,GeneID:4805987;Name=YP_001035250.1;Note=GC: 44.26%25%3B Codon Adaptation Index (CAI): 0.785. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.997)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035250.1;transl_table=11
NC_009009.1	RefSeq	gene	1321852	1322574	.	-	.	ID=gene1277;Dbxref=GeneID:4807193;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SSA_1302
NC_009009.1	RefSeq	CDS	1321852	1322574	.	-	0	ID=cds1230;Parent=gene1277;Dbxref=Genbank:YP_001035251.1,GeneID:4807193;Name=YP_001035251.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=YP_001035251.1;transl_table=11
NC_009009.1	RefSeq	gene	1322564	1323082	.	-	.	ID=gene1278;Dbxref=GeneID:4806827;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SSA_1303
NC_009009.1	RefSeq	CDS	1322564	1323082	.	-	0	ID=cds1231;Parent=gene1278;Dbxref=Genbank:YP_001035252.1,GeneID:4806827;Name=YP_001035252.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=YP_001035252.1;transl_table=11
NC_009009.1	RefSeq	gene	1323177	1323539	.	-	.	ID=gene1279;Dbxref=GeneID:4806804;Name=SSA_1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1304
NC_009009.1	RefSeq	CDS	1323177	1323539	.	-	0	ID=cds1232;Parent=gene1279;Dbxref=Genbank:YP_001035253.1,GeneID:4806804;Name=YP_001035253.1;Note=GC: 49.04%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035253.1;transl_table=11
NC_009009.1	RefSeq	gene	1323615	1324169	.	-	.	ID=gene1280;Dbxref=GeneID:4807987;Name=SSA_1305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1305
NC_009009.1	RefSeq	CDS	1323615	1324169	.	-	0	ID=cds1233;Parent=gene1280;Dbxref=Genbank:YP_001035254.1,GeneID:4807987;Name=YP_001035254.1;Note=GC: 41.8%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035254.1;transl_table=11
NC_009009.1	RefSeq	gene	1324335	1325000	.	-	.	ID=gene1281;Dbxref=GeneID:4807988;Name=trkA2;gbkey=Gene;gene=trkA2;gene_biotype=protein_coding;locus_tag=SSA_1306
NC_009009.1	RefSeq	CDS	1324335	1325000	.	-	0	ID=cds1234;Parent=gene1281;Dbxref=Genbank:YP_001035255.1,GeneID:4807988;Name=YP_001035255.1;Note=GC: 46.7%25%3B Transporter classification TC:2.A.38.4.4. Codon Adaptation Index (CAI): 0.784.;gbkey=CDS;gene=trkA2;product=Trk transporter NAD+ binding protein-K+ transport;protein_id=YP_001035255.1;transl_table=11
NC_009009.1	RefSeq	gene	1325011	1326360	.	-	.	ID=gene1282;Dbxref=GeneID:4807769;Name=trkH2;gbkey=Gene;gene=trkH2;gene_biotype=protein_coding;locus_tag=SSA_1307
NC_009009.1	RefSeq	CDS	1325011	1326360	.	-	0	ID=cds1235;Parent=gene1282;Dbxref=Genbank:YP_001035256.1,GeneID:4807769;Name=YP_001035256.1;Note=GC: 45.33%25%3B Transporter classification TC:2.A.38.4.3. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.771. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=trkH2;product=Trk transporter membrane-spanning protein-K+ transport;protein_id=YP_001035256.1;transl_table=11
NC_009009.1	RefSeq	gene	1326357	1326908	.	-	.	ID=gene1283;Dbxref=GeneID:4806810;Name=SSA_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1308
NC_009009.1	RefSeq	CDS	1326357	1326908	.	-	0	ID=cds1236;Parent=gene1283;Dbxref=Genbank:YP_001035257.1,GeneID:4806810;Name=YP_001035257.1;Note=GC: 45.83%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035257.1;transl_table=11
NC_009009.1	RefSeq	gene	1327169	1327408	.	-	.	ID=gene1284;Dbxref=GeneID:4808094;Name=SSA_1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1309
NC_009009.1	RefSeq	CDS	1327169	1327408	.	-	0	ID=cds1237;Parent=gene1284;Dbxref=Genbank:YP_001035258.1,GeneID:4808094;Name=YP_001035258.1;Note=GC: 39.17%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves;gbkey=CDS;product=RNA-binding protein;protein_id=YP_001035258.1;transl_table=11
NC_009009.1	RefSeq	gene	1327428	1327700	.	-	.	ID=gene1285;Dbxref=GeneID:4806831;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SSA_1310
NC_009009.1	RefSeq	CDS	1327428	1327700	.	-	0	ID=cds1238;Parent=gene1285;Dbxref=Genbank:YP_001035259.1,GeneID:4806831;Name=YP_001035259.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=YP_001035259.1;transl_table=11
NC_009009.1	RefSeq	gene	1327932	1328483	.	-	.	ID=gene1286;Dbxref=GeneID:4806730;Name=SSA_1311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1311
NC_009009.1	RefSeq	CDS	1327932	1328483	.	-	0	ID=cds1239;Parent=gene1286;Dbxref=Genbank:YP_001035260.1,GeneID:4806730;Name=YP_001035260.1;Note=GC: 45.83%25%3B Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=YP_001035260.1;transl_table=11
NC_009009.1	RefSeq	gene	1328827	1329753	.	-	.	ID=gene1287;Dbxref=GeneID:4807600;Name=SSA_1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1312
NC_009009.1	RefSeq	CDS	1328827	1329753	.	-	0	ID=cds1240;Parent=gene1287;Dbxref=Genbank:YP_001035261.1,GeneID:4807600;Name=YP_001035261.1;Note=GC: 35.81%25%3B Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;product=RADC-like protein;protein_id=YP_001035261.1;transl_table=11
NC_009009.1	RefSeq	gene	1329805	1330638	.	-	.	ID=gene1288;Dbxref=GeneID:4808092;Name=SSA_1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1313
NC_009009.1	RefSeq	CDS	1329805	1330638	.	-	0	ID=cds1241;Parent=gene1288;Dbxref=Genbank:YP_001035262.1,GeneID:4808092;Name=YP_001035262.1;Note=GC: 44.6%25%3B Codon Adaptation Index (CAI): 0.752. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035262.1;transl_table=11
NC_009009.1	RefSeq	gene	1330836	1331330	.	-	.	ID=gene1289;Dbxref=GeneID:4807977;Name=SSA_1314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1314
NC_009009.1	RefSeq	CDS	1330836	1331330	.	-	0	ID=cds1242;Parent=gene1289;Dbxref=Genbank:YP_001035263.1,GeneID:4807977;Name=YP_001035263.1;Note=GC: 44.04%25%3B Codon Adaptation Index (CAI): 0.804.;gbkey=CDS;product=Fe-S-cluster oxidoreductase;protein_id=YP_001035263.1;transl_table=11
NC_009009.1	RefSeq	gene	1331498	1332142	.	-	.	ID=gene1290;Dbxref=GeneID:4807220;Name=SSA_1315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1315
NC_009009.1	RefSeq	CDS	1331498	1332142	.	-	0	ID=cds1243;Parent=gene1290;Dbxref=Genbank:YP_001035264.1,GeneID:4807220;Name=YP_001035264.1;Note=GC: 42.48%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.814. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.997).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035264.1;transl_table=11
NC_009009.1	RefSeq	gene	1332247	1333038	.	-	.	ID=gene1291;Dbxref=GeneID:4806986;Name=SSA_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1316
NC_009009.1	RefSeq	CDS	1332247	1333038	.	-	0	ID=cds1244;Parent=gene1291;Dbxref=Genbank:YP_001035265.1,GeneID:4806986;Name=YP_001035265.1;Note=GC: 42.05%25%3B Transporter classification TC:4.B.1.1.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.798. Curator(s): J. Alves;gbkey=CDS;product=nicotinamide mononucleotide transporter;protein_id=YP_001035265.1;transl_table=11
NC_009009.1	RefSeq	gene	1333488	1333634	.	-	.	ID=gene1292;Dbxref=GeneID:4807109;Name=SSA_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1317
NC_009009.1	RefSeq	CDS	1333488	1333634	.	-	0	ID=cds1245;Parent=gene1292;Dbxref=Genbank:YP_001035266.1,GeneID:4807109;Name=YP_001035266.1;Note=GC: 31.97%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.702.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035266.1;transl_table=11
NC_009009.1	RefSeq	gene	1334079	1335911	.	-	.	ID=gene1293;Dbxref=GeneID:4807496;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=SSA_1318
NC_009009.1	RefSeq	CDS	1334079	1335911	.	-	0	ID=cds1246;Parent=gene1293;Dbxref=Genbank:YP_001035267.1,GeneID:4807496;Name=YP_001035267.1;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=YP_001035267.1;transl_table=11
NC_009009.1	RefSeq	gene	1336025	1336840	.	+	.	ID=gene1294;Dbxref=GeneID:4807058;Name=SSA_1319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1319
NC_009009.1	RefSeq	CDS	1336025	1336840	.	+	0	ID=cds1247;Parent=gene1294;Dbxref=Genbank:YP_001035268.1,GeneID:4807058;Name=YP_001035268.1;Note=GC: 47.43%25%3B Codon Adaptation Index (CAI): 0.801.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035268.1;transl_table=11
NC_009009.1	RefSeq	gene	1336919	1337284	.	-	.	ID=gene1295;Dbxref=GeneID:4806885;Name=SSA_1320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1320
NC_009009.1	RefSeq	CDS	1336919	1337284	.	-	0	ID=cds1248;Parent=gene1295;Dbxref=Genbank:YP_001035269.1,GeneID:4806885;Name=YP_001035269.1;Note=GC: 49.73%25%3B Codon Adaptation Index (CAI): 0.75.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035269.1;transl_table=11
NC_009009.1	RefSeq	gene	1337336	1338433	.	-	.	ID=gene1296;Dbxref=GeneID:4807005;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=SSA_1321
NC_009009.1	RefSeq	CDS	1337336	1338433	.	-	0	ID=cds1249;Parent=gene1296;Dbxref=Genbank:YP_001035270.1,GeneID:4807005;Name=YP_001035270.1;Note=GC: 43.62%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=YP_001035270.1;transl_table=11
NC_009009.1	RefSeq	gene	1338626	1339909	.	-	.	ID=gene1297;Dbxref=GeneID:4807277;Name=SSA_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1322
NC_009009.1	RefSeq	CDS	1338626	1339909	.	-	0	ID=cds1250;Parent=gene1297;Dbxref=Genbank:YP_001035271.1,GeneID:4807277;Name=YP_001035271.1;Note=GC: 46.26%25%3B Codon Adaptation Index (CAI): 0.769.;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_001035271.1;transl_table=11
NC_009009.1	RefSeq	gene	1339878	1340540	.	-	.	ID=gene1298;Dbxref=GeneID:4807147;Name=SSA_1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1323
NC_009009.1	RefSeq	CDS	1339878	1340540	.	-	0	ID=cds1251;Parent=gene1298;Dbxref=Genbank:YP_001035272.1,GeneID:4807147;Name=YP_001035272.1;Note=GC: 44.04%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035272.1;transl_table=11
NC_009009.1	RefSeq	gene	1340518	1341708	.	-	.	ID=gene1299;Dbxref=GeneID:4807839;Name=SSA_1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1324
NC_009009.1	RefSeq	CDS	1340518	1341708	.	-	0	ID=cds1252;Parent=gene1299;Dbxref=Genbank:YP_001035273.1,GeneID:4807839;Name=YP_001035273.1;Note=GC: 44.08%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=ceramide glucosyltransferase;protein_id=YP_001035273.1;transl_table=11
NC_009009.1	RefSeq	gene	1341663	1342433	.	-	.	ID=gene1300;Dbxref=GeneID:4807926;Name=SSA_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1325
NC_009009.1	RefSeq	CDS	1341663	1342433	.	-	0	ID=cds1253;Parent=gene1300;Dbxref=Genbank:YP_001035274.1,GeneID:4807926;Name=YP_001035274.1;Note=GC: 48.77%25%3B Codon Adaptation Index (CAI): 0.722.;gbkey=CDS;product=ketoacyl reductase hetN;protein_id=YP_001035274.1;transl_table=11
NC_009009.1	RefSeq	gene	1342572	1343795	.	+	.	ID=gene1301;Dbxref=GeneID:4806909;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=SSA_1326
NC_009009.1	RefSeq	CDS	1342572	1343795	.	+	0	ID=cds1254;Parent=gene1301;Dbxref=Genbank:YP_001035275.1,GeneID:4806909;Name=YP_001035275.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=YP_001035275.1;transl_table=11
NC_009009.1	RefSeq	gene	1343840	1344391	.	-	.	ID=gene1302;Dbxref=GeneID:4806911;Name=SSA_1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1327
NC_009009.1	RefSeq	CDS	1343840	1344391	.	-	0	ID=cds1255;Parent=gene1302;Dbxref=Genbank:YP_001035276.1,GeneID:4806911;Name=YP_001035276.1;Note=GC: 33.33%25%3B Codon Adaptation Index (CAI): 0.738. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035276.1;transl_table=11
NC_009009.1	RefSeq	gene	1344432	1344986	.	-	.	ID=gene1303;Dbxref=GeneID:4807230;Name=SSA_1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1328
NC_009009.1	RefSeq	CDS	1344432	1344986	.	-	0	ID=cds1256;Parent=gene1303;Dbxref=Genbank:YP_001035277.1,GeneID:4807230;Name=YP_001035277.1;Note=GC: 31.71%25%3B Codon Adaptation Index (CAI): 0.75. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035277.1;transl_table=11
NC_009009.1	RefSeq	gene	1345116	1345994	.	-	.	ID=gene1304;Dbxref=GeneID:4807089;Name=SSA_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1329
NC_009009.1	RefSeq	CDS	1345116	1345994	.	-	0	ID=cds1257;Parent=gene1304;Dbxref=Genbank:YP_001035278.1,GeneID:4807089;Name=YP_001035278.1;Note=GC: 39.02%25%3B Codon Adaptation Index (CAI): 0.753. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035278.1;transl_table=11
NC_009009.1	RefSeq	gene	1345991	1346458	.	-	.	ID=gene1305;Dbxref=GeneID:4807330;Name=SSA_1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1330
NC_009009.1	RefSeq	CDS	1345991	1346458	.	-	0	ID=cds1258;Parent=gene1305;Dbxref=Genbank:YP_001035279.1,GeneID:4807330;Name=YP_001035279.1;Note=GC: 37.61%25%3B Codon Adaptation Index (CAI): 0.719. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035279.1;transl_table=11
NC_009009.1	RefSeq	gene	1346563	1347222	.	-	.	ID=gene1306;Dbxref=GeneID:4807393;Name=SSA_1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1331
NC_009009.1	RefSeq	CDS	1346563	1347222	.	-	0	ID=cds1259;Parent=gene1306;Dbxref=Genbank:YP_001035280.1,GeneID:4807393;Name=YP_001035280.1;Note=GC: 36.97%25%3B Codon Adaptation Index (CAI): 0.796. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035280.1;transl_table=11
NC_009009.1	RefSeq	gene	1347307	1347735	.	-	.	ID=gene1307;Dbxref=GeneID:4807392;Name=SSA_1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1332
NC_009009.1	RefSeq	CDS	1347307	1347735	.	-	0	ID=cds1260;Parent=gene1307;Dbxref=Genbank:YP_001035281.1,GeneID:4807392;Name=YP_001035281.1;Note=GC: 33.8%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035281.1;transl_table=11
NC_009009.1	RefSeq	gene	1347783	1348529	.	-	.	ID=gene1308;Dbxref=GeneID:4807025;Name=SSA_1333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1333
NC_009009.1	RefSeq	CDS	1347783	1348529	.	-	0	ID=cds1261;Parent=gene1308;Dbxref=Genbank:YP_001035282.1,GeneID:4807025;Name=YP_001035282.1;Note=GC: 34.54%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035282.1;transl_table=11
NC_009009.1	RefSeq	gene	1348572	1349048	.	-	.	ID=gene1309;Dbxref=GeneID:4807028;Name=SSA_1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1334
NC_009009.1	RefSeq	CDS	1348572	1349048	.	-	0	ID=cds1262;Parent=gene1309;Dbxref=Genbank:YP_001035283.1,GeneID:4807028;Name=YP_001035283.1;Note=GC: 31.24%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035283.1;transl_table=11
NC_009009.1	RefSeq	gene	1349145	1349753	.	-	.	ID=gene1310;Dbxref=GeneID:4807143;Name=SSA_1335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1335
NC_009009.1	RefSeq	CDS	1349145	1349753	.	-	0	ID=cds1263;Parent=gene1310;Dbxref=Genbank:YP_001035284.1,GeneID:4807143;Name=YP_001035284.1;Note=GC: 35.3%25%3B Codon Adaptation Index (CAI): 0.733. Curator(s): J. Alves;gbkey=CDS;product=ankyrin repeat-containing protein;protein_id=YP_001035284.1;transl_table=11
NC_009009.1	RefSeq	gene	1349671	1350216	.	-	.	ID=gene1311;Dbxref=GeneID:4807280;Name=SSA_1336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1336
NC_009009.1	RefSeq	CDS	1349671	1350216	.	-	0	ID=cds1264;Parent=gene1311;Dbxref=Genbank:YP_001035285.1,GeneID:4807280;Name=YP_001035285.1;Note=GC: 31.5%25%3B Codon Adaptation Index (CAI): 0.734. Curator(s): J. Alves;gbkey=CDS;product=ankyrin repeat-containing protein;protein_id=YP_001035285.1;transl_table=11
NC_009009.1	RefSeq	gene	1350582	1351181	.	-	.	ID=gene1312;Dbxref=GeneID:4807354;Name=SSA_1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1337
NC_009009.1	RefSeq	CDS	1350582	1351181	.	-	0	ID=cds1265;Parent=gene1312;Dbxref=Genbank:YP_001035286.1,GeneID:4807354;Name=YP_001035286.1;Note=GC: 33.67%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.759. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035286.1;transl_table=11
NC_009009.1	RefSeq	gene	1351290	1351817	.	-	.	ID=gene1313;Dbxref=GeneID:4808040;Name=SSA_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1338
NC_009009.1	RefSeq	CDS	1351290	1351817	.	-	0	ID=cds1266;Parent=gene1313;Dbxref=Genbank:YP_001035287.1,GeneID:4808040;Name=YP_001035287.1;Note=GC: 35.8%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.739. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035287.1;transl_table=11
NC_009009.1	RefSeq	gene	1351969	1355514	.	-	.	ID=gene1314;Dbxref=GeneID:4807952;Name=phpA;gbkey=Gene;gene=phpA;gene_biotype=protein_coding;locus_tag=SSA_1339
NC_009009.1	RefSeq	CDS	1351969	1355514	.	-	0	ID=cds1267;Parent=gene1314;Dbxref=Genbank:YP_001035288.1,GeneID:4807952;Name=YP_001035288.1;Note=GC: 47.66%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.769. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.72)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=phpA;product=histidine triad protein D;protein_id=YP_001035288.1;transl_table=11
NC_009009.1	RefSeq	gene	1355524	1356462	.	-	.	ID=gene1315;Dbxref=GeneID:4807724;Name=SSA_1340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1340
NC_009009.1	RefSeq	CDS	1355524	1356462	.	-	0	ID=cds1268;Parent=gene1315;Dbxref=Genbank:YP_001035289.1,GeneID:4807724;Name=YP_001035289.1;Note=GC: 47.71%25%3B Transporter classification TC:3.A.1.15.3. Codon Adaptation Index (CAI): 0.774. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=Zn/Mn ABC transporter;protein_id=YP_001035289.1;transl_table=11
NC_009009.1	RefSeq	gene	1356738	1359917	.	-	.	ID=gene1316;Dbxref=GeneID:4808043;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SSA_1341
NC_009009.1	RefSeq	CDS	1356738	1359917	.	-	0	ID=cds1269;Parent=gene1316;Dbxref=Genbank:YP_001035290.1,GeneID:4808043;Name=YP_001035290.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=YP_001035290.1;transl_table=11
NC_009009.1	RefSeq	gene	1359941	1361107	.	-	.	ID=gene1317;Dbxref=GeneID:4806237;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=SSA_1342
NC_009009.1	RefSeq	CDS	1359941	1361107	.	-	0	ID=cds1270;Parent=gene1317;Dbxref=Genbank:YP_001035291.1,GeneID:4806237;Name=YP_001035291.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;gene=carA;product=carbamoyl phosphate synthase small subunit;protein_id=YP_001035291.1;transl_table=11
NC_009009.1	RefSeq	gene	1361132	1362049	.	-	.	ID=gene1318;Dbxref=GeneID:4807482;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=SSA_1343
NC_009009.1	RefSeq	CDS	1361132	1362049	.	-	0	ID=cds1271;Parent=gene1318;Dbxref=Genbank:YP_001035292.1,GeneID:4807482;Name=YP_001035292.1;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase;protein_id=YP_001035292.1;transl_table=11
NC_009009.1	RefSeq	gene	1362159	1363442	.	-	.	ID=gene1319;Dbxref=GeneID:4807807;Name=pyrP;gbkey=Gene;gene=pyrP;gene_biotype=protein_coding;locus_tag=SSA_1344
NC_009009.1	RefSeq	CDS	1362159	1363442	.	-	0	ID=cds1272;Parent=gene1319;Dbxref=Genbank:YP_001035293.1,GeneID:4807807;Name=YP_001035293.1;Note=GC: 47.74%25%3B Transporter classification TC:2.A.40.1.2. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;gene=pyrP;product=xanthine/uracil permease;protein_id=YP_001035293.1;transl_table=11
NC_009009.1	RefSeq	gene	1363451	1363969	.	-	.	ID=gene1320;Dbxref=GeneID:4807778;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=SSA_1345
NC_009009.1	RefSeq	CDS	1363451	1363969	.	-	0	ID=cds1273;Parent=gene1320;Dbxref=Genbank:YP_001035294.1,GeneID:4807778;Name=YP_001035294.1;Note=regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes%2C also has been shown to have uracil phosphoribosyltransferase activity;gbkey=CDS;gene=pyrR;product=bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase;protein_id=YP_001035294.1;transl_table=11
NC_009009.1	RefSeq	gene	1364241	1364873	.	-	.	ID=gene1321;Dbxref=GeneID:4807647;Name=SSA_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1346
NC_009009.1	RefSeq	CDS	1364241	1364873	.	-	0	ID=cds1274;Parent=gene1321;Dbxref=Genbank:YP_001035295.1,GeneID:4807647;Name=YP_001035295.1;Note=GC: 40.28%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035295.1;transl_table=11
NC_009009.1	RefSeq	gene	1364881	1365231	.	-	.	ID=gene1322;Dbxref=GeneID:4807698;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=SSA_1347
NC_009009.1	RefSeq	CDS	1364881	1365231	.	-	0	ID=cds1275;Parent=gene1322;Dbxref=Genbank:YP_001035296.1,GeneID:4807698;Name=YP_001035296.1;Note=GC: 45.87%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;gene=phnA;product=PhnA protein;protein_id=YP_001035296.1;transl_table=11
NC_009009.1	RefSeq	gene	1365495	1366019	.	+	.	ID=gene1323;Dbxref=GeneID:4808031;Name=SSA_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1348
NC_009009.1	RefSeq	CDS	1365495	1366019	.	+	0	ID=cds1276;Parent=gene1323;Dbxref=Genbank:YP_001035297.1,GeneID:4808031;Name=YP_001035297.1;Note=GC: 44.57%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.77. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035297.1;transl_table=11
NC_009009.1	RefSeq	gene	1366058	1366573	.	+	.	ID=gene1324;Dbxref=GeneID:4807981;Name=SSA_1349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1349
NC_009009.1	RefSeq	CDS	1366058	1366573	.	+	0	ID=cds1277;Parent=gene1324;Dbxref=Genbank:YP_001035298.1,GeneID:4807981;Name=YP_001035298.1;Note=GC: 47.67%25%3B Codon Adaptation Index (CAI): 0.77. Curator(s): J. Alves;gbkey=CDS;product=biotin repressor family transcriptional regulator;protein_id=YP_001035298.1;transl_table=11
NC_009009.1	RefSeq	gene	1367035	1367502	.	-	.	ID=gene1325;Dbxref=GeneID:4807980;Name=SSA_1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1350
NC_009009.1	RefSeq	CDS	1367035	1367502	.	-	0	ID=cds1278;Parent=gene1325;Dbxref=Genbank:YP_001035299.1,GeneID:4807980;Name=YP_001035299.1;Note=GC: 45.09%25%3B Codon Adaptation Index (CAI): 0.793. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035299.1;transl_table=11
NC_009009.1	RefSeq	gene	1367585	1368031	.	-	.	ID=gene1326;Dbxref=GeneID:4807621;Name=SSA_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1352
NC_009009.1	RefSeq	CDS	1367585	1368031	.	-	0	ID=cds1279;Parent=gene1326;Dbxref=Genbank:YP_001035300.1,GeneID:4807621;Name=YP_001035300.1;Note=GC: 34.23%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035300.1;transl_table=11
NC_009009.1	RefSeq	gene	1368064	1368609	.	-	.	ID=gene1327;Dbxref=GeneID:4806088;Name=SSA_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1353
NC_009009.1	RefSeq	CDS	1368064	1368609	.	-	0	ID=cds1280;Parent=gene1327;Dbxref=Genbank:YP_001035301.1,GeneID:4806088;Name=YP_001035301.1;Note=GC: 45.05%25%3B Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035301.1;transl_table=11
NC_009009.1	RefSeq	gene	1368645	1369142	.	-	.	ID=gene1328;Dbxref=GeneID:4808007;Name=SSA_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1354
NC_009009.1	RefSeq	CDS	1368645	1369142	.	-	0	ID=cds1281;Parent=gene1328;Dbxref=Genbank:YP_001035302.1,GeneID:4808007;Name=YP_001035302.1;Note=GC: 40.76%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035302.1;transl_table=11
NC_009009.1	RefSeq	gene	1369173	1369949	.	-	.	ID=gene1329;Dbxref=GeneID:4805984;Name=SSA_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1355
NC_009009.1	RefSeq	CDS	1369173	1369949	.	-	0	ID=cds1282;Parent=gene1329;Dbxref=Genbank:YP_001035303.1,GeneID:4805984;Name=YP_001035303.1;Note=GC: 32.43%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.771. SignalP prediction: Yes (prob. 0.941).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035303.1;transl_table=11
NC_009009.1	RefSeq	gene	1370017	1372005	.	-	.	ID=gene1330;Dbxref=GeneID:4806070;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=SSA_1356
NC_009009.1	RefSeq	CDS	1370017	1372005	.	-	0	ID=cds1283;Parent=gene1330;Dbxref=Genbank:YP_001035304.1,GeneID:4806070;Name=YP_001035304.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;gene=uvrB;product=excinuclease ABC subunit B;protein_id=YP_001035304.1;transl_table=11
NC_009009.1	RefSeq	gene	1372167	1373114	.	-	.	ID=gene1331;Dbxref=GeneID:4807478;Name=SSA_1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1357
NC_009009.1	RefSeq	CDS	1372167	1373114	.	-	0	ID=cds1284;Parent=gene1331;Dbxref=Genbank:YP_001035305.1,GeneID:4807478;Name=YP_001035305.1;Note=GC: 42.83%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035305.1;transl_table=11
NC_009009.1	RefSeq	gene	1373194	1374126	.	-	.	ID=gene1332;Dbxref=GeneID:4807614;Name=SSA_1358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1358
NC_009009.1	RefSeq	CDS	1373194	1374126	.	-	0	ID=cds1285;Parent=gene1332;Dbxref=Genbank:YP_001035306.1,GeneID:4807614;Name=YP_001035306.1;Note=GC: 46.41%25%3B Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.752.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035306.1;transl_table=11
NC_009009.1	RefSeq	gene	1374322	1376490	.	+	.	ID=gene1333;Dbxref=GeneID:4807529;Name=SSA_1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1359
NC_009009.1	RefSeq	CDS	1374322	1376490	.	+	0	ID=cds1286;Parent=gene1333;Dbxref=Genbank:YP_001035307.1,GeneID:4807529;Name=YP_001035307.1;Note=GC: 45.55%25%3B Transporter classification TC:3.A.1.3.12. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter permease;protein_id=YP_001035307.1;transl_table=11
NC_009009.1	RefSeq	gene	1376490	1377230	.	+	.	ID=gene1334;Dbxref=GeneID:4806200;Name=SSA_1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1360
NC_009009.1	RefSeq	CDS	1376490	1377230	.	+	0	ID=cds1287;Parent=gene1334;Dbxref=Genbank:YP_001035308.1,GeneID:4806200;Name=YP_001035308.1;Note=GC: 48.04%25%3B Transporter classification TC:3.A.1.3.8. Codon Adaptation Index (CAI): 0.778. Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter ATPase;protein_id=YP_001035308.1;transl_table=11
NC_009009.1	RefSeq	gene	1377308	1377844	.	+	.	ID=gene1335;Dbxref=GeneID:4807842;Name=SSA_1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1361
NC_009009.1	RefSeq	CDS	1377308	1377844	.	+	0	ID=cds1288;Parent=gene1335;Dbxref=Genbank:YP_001035309.1,GeneID:4807842;Name=YP_001035309.1;Note=GC: 38.18%25%3B Codon Adaptation Index (CAI): 0.728. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=ORFA%2C transposon ISSsa2;protein_id=YP_001035309.1;transl_table=11
NC_009009.1	RefSeq	gene	1378051	1378659	.	+	.	ID=gene1336;Dbxref=GeneID:4805998;Name=SSA_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1362
NC_009009.1	RefSeq	CDS	1378051	1378659	.	+	0	ID=cds1289;Parent=gene1336;Dbxref=Genbank:YP_001035310.1,GeneID:4805998;Name=YP_001035310.1;Note=GC: 40.07%25%3B Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;product=ORFB%2C transposon ISSsa2;protein_id=YP_001035310.1;transl_table=11
NC_009009.1	RefSeq	gene	1378729	1380507	.	-	.	ID=gene1337;Dbxref=GeneID:4806004;Name=SSA_1363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1363
NC_009009.1	RefSeq	CDS	1378729	1380507	.	-	0	ID=cds1290;Parent=gene1337;Dbxref=Genbank:YP_001035311.1,GeneID:4806004;Name=YP_001035311.1;Note=GC: 45.76%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.76. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=FmtA-like protein;protein_id=YP_001035311.1;transl_table=11
NC_009009.1	RefSeq	gene	1380572	1381387	.	-	.	ID=gene1338;Dbxref=GeneID:4806216;Name=SSA_1364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1364
NC_009009.1	RefSeq	CDS	1380572	1381387	.	-	0	ID=cds1291;Parent=gene1338;Dbxref=Genbank:YP_001035312.1,GeneID:4806216;Name=YP_001035312.1;Note=GC: 44.61%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.739.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035312.1;transl_table=11
NC_009009.1	RefSeq	gene	1381442	1382389	.	-	.	ID=gene1339;Dbxref=GeneID:4806262;Name=SSA_1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1365
NC_009009.1	RefSeq	CDS	1381442	1382389	.	-	0	ID=cds1292;Parent=gene1339;Dbxref=Genbank:YP_001035313.1,GeneID:4806262;Name=YP_001035313.1;Note=GC: 45.25%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=FmtA-like protein;protein_id=YP_001035313.1;transl_table=11
NC_009009.1	RefSeq	gene	1382386	1383753	.	-	.	ID=gene1340;Dbxref=GeneID:4806323;Name=SSA_1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1366
NC_009009.1	RefSeq	CDS	1382386	1383753	.	-	0	ID=cds1293;Parent=gene1340;Dbxref=Genbank:YP_001035314.1,GeneID:4806323;Name=YP_001035314.1;Note=GC: 47%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=alkaline D-stereospecific endopeptidase;protein_id=YP_001035314.1;transl_table=11
NC_009009.1	RefSeq	gene	1383733	1383888	.	+	.	ID=gene1341;Dbxref=GeneID:4806050;Name=SSA_1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1367
NC_009009.1	RefSeq	CDS	1383733	1383888	.	+	0	ID=cds1294;Parent=gene1341;Dbxref=Genbank:YP_001035315.1,GeneID:4806050;Name=YP_001035315.1;Note=GC: 47.44%25%3B Codon Adaptation Index (CAI): 0.701.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035315.1;transl_table=11
NC_009009.1	RefSeq	gene	1383838	1384167	.	-	.	ID=gene1342;Dbxref=GeneID:4805946;Name=SSA_1368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1368
NC_009009.1	RefSeq	CDS	1383838	1384167	.	-	0	ID=cds1295;Parent=gene1342;Dbxref=Genbank:YP_001035316.1,GeneID:4805946;Name=YP_001035316.1;Note=GC: 43.94%25%3B Codon Adaptation Index (CAI): 0.751. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035316.1;transl_table=11
NC_009009.1	RefSeq	gene	1384232	1386019	.	-	.	ID=gene1343;Dbxref=GeneID:4805778;Name=SSA_1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1369
NC_009009.1	RefSeq	CDS	1384232	1386019	.	-	0	ID=cds1296;Parent=gene1343;Dbxref=Genbank:YP_001035317.1,GeneID:4805778;Name=YP_001035317.1;Note=GC: 46.7%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.784. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=FmtA-like protein;protein_id=YP_001035317.1;transl_table=11
NC_009009.1	RefSeq	gene	1386123	1387058	.	-	.	ID=gene1344;Dbxref=GeneID:4806772;Name=SSA_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1370
NC_009009.1	RefSeq	CDS	1386123	1387058	.	-	0	ID=cds1297;Parent=gene1344;Dbxref=Genbank:YP_001035318.1,GeneID:4806772;Name=YP_001035318.1;Note=GC: 43.8%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.731.;gbkey=CDS;product=CAAX amino protease;protein_id=YP_001035318.1;transl_table=11
NC_009009.1	RefSeq	gene	1387141	1388922	.	-	.	ID=gene1345;Dbxref=GeneID:4806681;Name=SSA_1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1371
NC_009009.1	RefSeq	CDS	1387141	1388922	.	-	0	ID=cds1298;Parent=gene1345;Dbxref=Genbank:YP_001035319.1,GeneID:4806681;Name=YP_001035319.1;Note=GC: 46.02%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.756. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=FmtA-like protein;protein_id=YP_001035319.1;transl_table=11
NC_009009.1	RefSeq	gene	1389036	1389227	.	-	.	ID=gene1346;Dbxref=GeneID:4806252;Name=SSA_1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1372
NC_009009.1	RefSeq	CDS	1389036	1389227	.	-	0	ID=cds1299;Parent=gene1346;Dbxref=Genbank:YP_001035320.1,GeneID:4806252;Name=YP_001035320.1;Note=GC: 44.27%25%3B Codon Adaptation Index (CAI): 0.701. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.991).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035320.1;transl_table=11
NC_009009.1	RefSeq	gene	1389847	1391373	.	+	.	ID=gene1347;Dbxref=GeneID:4806790;Name=SSA_1373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1373
NC_009009.1	RefSeq	CDS	1389847	1391373	.	+	0	ID=cds1300;Parent=gene1347;Dbxref=Genbank:YP_001035321.1,GeneID:4806790;Name=YP_001035321.1;Note=GC: 49.38%25%3B Transporter classification TC:3.A.1.121.2. Codon Adaptation Index (CAI): 0.752. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_001035321.1;transl_table=11
NC_009009.1	RefSeq	gene	1391449	1393185	.	-	.	ID=gene1348;Dbxref=GeneID:4806419;Name=SSA_1374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1374
NC_009009.1	RefSeq	CDS	1391449	1393185	.	-	0	ID=cds1301;Parent=gene1348;Dbxref=Genbank:YP_001035322.1,GeneID:4806419;Name=YP_001035322.1;Note=GC: 47.27%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.752. SignalP prediction: Yes (prob. 0.984)%3B Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter permease/ATPase;protein_id=YP_001035322.1;transl_table=11
NC_009009.1	RefSeq	gene	1393175	1394917	.	-	.	ID=gene1349;Dbxref=GeneID:4807687;Name=SSA_1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1375
NC_009009.1	RefSeq	CDS	1393175	1394917	.	-	0	ID=cds1302;Parent=gene1349;Dbxref=Genbank:YP_001035323.1,GeneID:4807687;Name=YP_001035323.1;Note=GC: 48.48%25%3B Transporter classification TC:3.A.1.117.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.783. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter permease/ATPase;protein_id=YP_001035323.1;transl_table=11
NC_009009.1	RefSeq	gene	1395014	1396201	.	-	.	ID=gene1350;Dbxref=GeneID:4807936;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=SSA_1376
NC_009009.1	RefSeq	CDS	1395014	1396201	.	-	0	ID=cds1303;Parent=gene1350;Dbxref=Genbank:YP_001035324.1,GeneID:4807936;Name=YP_001035324.1;Note=GC: 41.92%25%3B Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.769.;gbkey=CDS;gene=pmrB;product=transporter;protein_id=YP_001035324.1;transl_table=11
NC_009009.1	RefSeq	gene	1396358	1397704	.	-	.	ID=gene1351;Dbxref=GeneID:4807515;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=SSA_1377
NC_009009.1	RefSeq	CDS	1396358	1397704	.	-	0	ID=cds1304;Parent=gene1351;Dbxref=Genbank:YP_001035325.1,GeneID:4807515;Name=YP_001035325.1;Note=catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=asnC;product=asparaginyl-tRNA synthetase;protein_id=YP_001035325.1;transl_table=11
NC_009009.1	RefSeq	gene	1397726	1398088	.	-	.	ID=gene1352;Dbxref=GeneID:4807627;Name=SSA_1378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1378
NC_009009.1	RefSeq	CDS	1397726	1398088	.	-	0	ID=cds1305;Parent=gene1352;Dbxref=Genbank:YP_001035326.1,GeneID:4807627;Name=YP_001035326.1;Note=GC: 44.63%25%3B Codon Adaptation Index (CAI): 0.804.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035326.1;transl_table=11
NC_009009.1	RefSeq	gene	1398268	1398618	.	-	.	ID=gene1353;Dbxref=GeneID:4806507;Name=SSA_1379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1379
NC_009009.1	RefSeq	CDS	1398268	1398618	.	-	0	ID=cds1306;Parent=gene1353;Dbxref=Genbank:YP_001035327.1,GeneID:4806507;Name=YP_001035327.1;Note=GC: 42.45%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035327.1;transl_table=11
NC_009009.1	RefSeq	gene	1398628	1399221	.	-	.	ID=gene1354;Dbxref=GeneID:4806467;Name=SSA_1380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1380
NC_009009.1	RefSeq	CDS	1398628	1399221	.	-	0	ID=cds1307;Parent=gene1354;Dbxref=Genbank:YP_001035328.1,GeneID:4806467;Name=YP_001035328.1;Note=GC: 43.77%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035328.1;transl_table=11
NC_009009.1	RefSeq	gene	1399236	1399655	.	-	.	ID=gene1355;Dbxref=GeneID:4806342;Name=SSA_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1381
NC_009009.1	RefSeq	CDS	1399236	1399655	.	-	0	ID=cds1308;Parent=gene1355;Dbxref=Genbank:YP_001035329.1,GeneID:4806342;Name=YP_001035329.1;Note=GC: 40.71%25%3B Codon Adaptation Index (CAI): 0.718.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035329.1;transl_table=11
NC_009009.1	RefSeq	gene	1399887	1400360	.	-	.	ID=gene1356;Dbxref=GeneID:4808009;Name=SSA_1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1382
NC_009009.1	RefSeq	CDS	1399887	1400360	.	-	0	ID=cds1309;Parent=gene1356;Dbxref=Genbank:YP_001035330.1,GeneID:4808009;Name=YP_001035330.1;Note=GC: 40.72%25%3B Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035330.1;transl_table=11
NC_009009.1	RefSeq	gene	1400627	1401808	.	-	.	ID=gene1357;Dbxref=GeneID:4807356;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=SSA_1383
NC_009009.1	RefSeq	CDS	1400627	1401808	.	-	0	ID=cds1310;Parent=gene1357;Dbxref=Genbank:YP_001035331.1,GeneID:4807356;Name=YP_001035331.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;gene=aspB;product=aspartate aminotransferase;protein_id=YP_001035331.1;transl_table=11
NC_009009.1	RefSeq	gene	1401805	1402293	.	-	.	ID=gene1358;Dbxref=GeneID:4806987;Name=SSA_1384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1384
NC_009009.1	RefSeq	CDS	1401805	1402293	.	-	0	ID=cds1311;Parent=gene1358;Dbxref=Genbank:YP_001035332.1,GeneID:4806987;Name=YP_001035332.1;Note=GC: 43.97%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.78. SignalP prediction: Yes (prob. 0.986).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035332.1;transl_table=11
NC_009009.1	RefSeq	gene	1402408	1402854	.	+	.	ID=gene1359;Dbxref=GeneID:4806996;Name=SSA_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1385
NC_009009.1	RefSeq	CDS	1402408	1402854	.	+	0	ID=cds1312;Parent=gene1359;Dbxref=Genbank:YP_001035333.1,GeneID:4806996;Name=YP_001035333.1;Note=GC: 40.04%25%3B Codon Adaptation Index (CAI): 0.838. Curator(s): J. Alves;gbkey=CDS;product=multiple antibiotic resistance operon transcription repressor MarR;protein_id=YP_001035333.1;transl_table=11
NC_009009.1	RefSeq	gene	1402940	1403488	.	+	.	ID=gene1360;Dbxref=GeneID:4807071;Name=SSA_1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1386
NC_009009.1	RefSeq	CDS	1402940	1403488	.	+	0	ID=cds1313;Parent=gene1360;Dbxref=Genbank:YP_001035334.1,GeneID:4807071;Name=YP_001035334.1;Note=GC: 47.18%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): J. Alves;gbkey=CDS;product=NADPH-dependent FMN reductase;protein_id=YP_001035334.1;transl_table=11
NC_009009.1	RefSeq	gene	1403587	1403886	.	-	.	ID=gene1361;Dbxref=GeneID:4807062;Name=SSA_1387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1387
NC_009009.1	RefSeq	CDS	1403587	1403886	.	-	0	ID=cds1314;Parent=gene1361;Dbxref=Genbank:YP_001035335.1,GeneID:4807062;Name=YP_001035335.1;Note=GC: 30.33%25%3B Codon Adaptation Index (CAI): 0.778. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035335.1;transl_table=11
NC_009009.1	RefSeq	gene	1403918	1404463	.	-	.	ID=gene1362;Dbxref=GeneID:4807170;Name=SSA_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1388
NC_009009.1	RefSeq	CDS	1403918	1404463	.	-	0	ID=cds1315;Parent=gene1362;Dbxref=Genbank:YP_001035336.1,GeneID:4807170;Name=YP_001035336.1;Note=GC: 32.05%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.749. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035336.1;transl_table=11
NC_009009.1	RefSeq	gene	1404460	1405002	.	-	.	ID=gene1363;Dbxref=GeneID:4807007;Name=SSA_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1389
NC_009009.1	RefSeq	CDS	1404460	1405002	.	-	0	ID=cds1316;Parent=gene1363;Dbxref=Genbank:YP_001035337.1,GeneID:4807007;Name=YP_001035337.1;Note=GC: 29.1%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.746.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035337.1;transl_table=11
NC_009009.1	RefSeq	gene	1405723	1406208	.	-	.	ID=gene1364;Dbxref=GeneID:4807130;Name=SSA_1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1390
NC_009009.1	RefSeq	CDS	1405723	1406208	.	-	0	ID=cds1317;Parent=gene1364;Dbxref=Genbank:YP_001035338.1,GeneID:4807130;Name=YP_001035338.1;Note=GC: 36.01%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.759. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.732).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035338.1;transl_table=11
NC_009009.1	RefSeq	gene	1406248	1406880	.	-	.	ID=gene1365;Dbxref=GeneID:4807297;Name=SSA_1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1391
NC_009009.1	RefSeq	CDS	1406248	1406880	.	-	0	ID=cds1318;Parent=gene1365;Dbxref=Genbank:YP_001035339.1,GeneID:4807297;Name=YP_001035339.1;Note=GC: 34.91%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.714. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.866).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035339.1;transl_table=11
NC_009009.1	RefSeq	gene	1406882	1408513	.	-	.	ID=gene1366;Dbxref=GeneID:4806445;Name=SSA_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1392
NC_009009.1	RefSeq	CDS	1406882	1408513	.	-	0	ID=cds1319;Parent=gene1366;Dbxref=Genbank:YP_001035340.1,GeneID:4806445;Name=YP_001035340.1;Note=GC: 37.62%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035340.1;transl_table=11
NC_009009.1	RefSeq	gene	1408504	1408863	.	-	.	ID=gene1367;Dbxref=GeneID:4806499;Name=SSA_1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1393
NC_009009.1	RefSeq	CDS	1408504	1408863	.	-	0	ID=cds1320;Parent=gene1367;Dbxref=Genbank:YP_001035341.1,GeneID:4806499;Name=YP_001035341.1;Note=GC: 34.44%25%3B Codon Adaptation Index (CAI): 0.74.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035341.1;transl_table=11
NC_009009.1	RefSeq	gene	1408863	1409138	.	-	.	ID=gene1368;Dbxref=GeneID:4805945;Name=SSA_1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1394
NC_009009.1	RefSeq	CDS	1408863	1409138	.	-	0	ID=cds1321;Parent=gene1368;Dbxref=Genbank:YP_001035342.1,GeneID:4805945;Name=YP_001035342.1;Note=GC: 41.67%25%3B Codon Adaptation Index (CAI): 0.793.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035342.1;transl_table=11
NC_009009.1	RefSeq	gene	1409135	1409863	.	-	.	ID=gene1369;Dbxref=GeneID:4806048;Name=SSA_1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1395
NC_009009.1	RefSeq	CDS	1409135	1409863	.	-	0	ID=cds1322;Parent=gene1369;Dbxref=Genbank:YP_001035343.1,GeneID:4806048;Name=YP_001035343.1;Note=GC: 45.27%25%3B Codon Adaptation Index (CAI): 0.735. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035343.1;transl_table=11
NC_009009.1	RefSeq	gene	1409880	1410464	.	-	.	ID=gene1370;Dbxref=GeneID:4807812;Name=SSA_1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1396
NC_009009.1	RefSeq	CDS	1409880	1410464	.	-	0	ID=cds1323;Parent=gene1370;Dbxref=Genbank:YP_001035344.1,GeneID:4807812;Name=YP_001035344.1;Note=GC: 42.74%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.759. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035344.1;transl_table=11
NC_009009.1	RefSeq	gene	1410729	1411055	.	+	.	ID=gene1371;Dbxref=GeneID:4806591;Name=SSA_1397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1397
NC_009009.1	RefSeq	CDS	1410729	1411055	.	+	0	ID=cds1324;Parent=gene1371;Dbxref=Genbank:YP_001035345.1,GeneID:4806591;Name=YP_001035345.1;Note=GC: 40.67%25%3B Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035345.1;transl_table=11
NC_009009.1	RefSeq	gene	1411021	1411686	.	+	.	ID=gene1372;Dbxref=GeneID:4807073;Name=hlyIII;gbkey=Gene;gene=hlyIII;gene_biotype=protein_coding;locus_tag=SSA_1398
NC_009009.1	RefSeq	CDS	1411021	1411686	.	+	0	ID=cds1325;Parent=gene1372;Dbxref=Genbank:YP_001035346.1,GeneID:4807073;Name=YP_001035346.1;Note=GC: 47.15%25%3B Transporter classification TC:9.B.30.1.1. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.743. SignalP prediction: Yes (prob. 0.7)%3B Curator(s): J. Alves;gbkey=CDS;gene=hlyIII;product=hemolysin III-like protein;protein_id=YP_001035346.1;transl_table=11
NC_009009.1	RefSeq	gene	1411749	1412315	.	-	.	ID=gene1373;Dbxref=GeneID:4807630;Name=SSA_1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1399
NC_009009.1	RefSeq	CDS	1411749	1412315	.	-	0	ID=cds1326;Parent=gene1373;Dbxref=Genbank:YP_001035347.1,GeneID:4807630;Name=YP_001035347.1;Note=GC: 41.09%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.754. SignalP prediction: Yes (prob. 0.992)%3B Curator(s): J. Alves%3B possibly membrane-associated;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035347.1;transl_table=11
NC_009009.1	RefSeq	gene	1412296	1413162	.	-	.	ID=gene1374;Dbxref=GeneID:4807878;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;locus_tag=SSA_1400
NC_009009.1	RefSeq	CDS	1412296	1413162	.	-	0	ID=cds1327;Parent=gene1374;Dbxref=Genbank:YP_001035348.1,GeneID:4807878;Name=YP_001035348.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;gene=pdxK;product=pyridoxamine kinase;protein_id=YP_001035348.1;transl_table=11
NC_009009.1	RefSeq	gene	1413202	1414521	.	+	.	ID=gene1375;Dbxref=GeneID:4807814;Name=SSA_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1401
NC_009009.1	RefSeq	CDS	1413202	1414521	.	+	0	ID=cds1328;Parent=gene1375;Dbxref=Genbank:YP_001035349.1,GeneID:4807814;Name=YP_001035349.1;Note=GC: 44.39%25%3B Codon Adaptation Index (CAI): 0.749. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_001035349.1;transl_table=11
NC_009009.1	RefSeq	gene	1414571	1416310	.	-	.	ID=gene1376;Dbxref=GeneID:4807969;Name=SSA_1402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1402
NC_009009.1	RefSeq	CDS	1414571	1416310	.	-	0	ID=cds1329;Parent=gene1376;Dbxref=Genbank:YP_001035350.1,GeneID:4807969;Name=YP_001035350.1;Note=GC: 45.8%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.778. SignalP prediction: Yes (prob. 0.98)%3B Curator(s): J. Alves;gbkey=CDS;product=multidrig ABC transporter ATPase/permease;protein_id=YP_001035350.1;transl_table=11
NC_009009.1	RefSeq	gene	1416312	1418054	.	-	.	ID=gene1377;Dbxref=GeneID:4808010;Name=SSA_1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1403
NC_009009.1	RefSeq	CDS	1416312	1418054	.	-	0	ID=cds1330;Parent=gene1377;Dbxref=Genbank:YP_001035351.1,GeneID:4808010;Name=YP_001035351.1;Note=GC: 47.1%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.775. SignalP prediction: Yes (prob. 0.997)%3B Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter permease/ATPase;protein_id=YP_001035351.1;transl_table=11
NC_009009.1	RefSeq	gene	1418142	1418813	.	-	.	ID=gene1378;Dbxref=GeneID:4807388;Name=SSA_1404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1404
NC_009009.1	RefSeq	CDS	1418142	1418813	.	-	0	ID=cds1331;Parent=gene1378;Dbxref=Genbank:YP_001035352.1,GeneID:4807388;Name=YP_001035352.1;Note=GC: 45.09%25%3B Codon Adaptation Index (CAI): 0.793. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035352.1;transl_table=11
NC_009009.1	RefSeq	gene	1418848	1419483	.	-	.	ID=gene1379;Dbxref=GeneID:4807971;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=SSA_1405
NC_009009.1	RefSeq	CDS	1418848	1419483	.	-	0	ID=cds1332;Parent=gene1379;Dbxref=Genbank:YP_001035353.1,GeneID:4807971;Name=YP_001035353.1;Note=GC: 47.48%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;gene=cutC;product=copper homeostasis protein CutC;protein_id=YP_001035353.1;transl_table=11
NC_009009.1	RefSeq	gene	1419545	1420405	.	-	.	ID=gene1380;Dbxref=GeneID:4807384;Name=SSA_1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1406
NC_009009.1	RefSeq	CDS	1419545	1420405	.	-	0	ID=cds1333;Parent=gene1380;Dbxref=Genbank:YP_001035354.1,GeneID:4807384;Name=YP_001035354.1;Note=GC: 42.97%25%3B Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;product=histone acetyltransferase HPA2-like acetyltransferase;protein_id=YP_001035354.1;transl_table=11
NC_009009.1	RefSeq	gene	1420496	1421095	.	-	.	ID=gene1381;Dbxref=GeneID:4806750;Name=SSA_1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1408
NC_009009.1	RefSeq	CDS	1420496	1421095	.	-	0	ID=cds1334;Parent=gene1381;Dbxref=Genbank:YP_001035355.1,GeneID:4806750;Name=YP_001035355.1;Note=GC: 44.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035355.1;transl_table=11
NC_009009.1	RefSeq	gene	1421299	1422345	.	-	.	ID=gene1382;Dbxref=GeneID:4807365;Name=rmlB;gbkey=Gene;gene=rmlB;gene_biotype=protein_coding;locus_tag=SSA_1409
NC_009009.1	RefSeq	CDS	1421299	1422345	.	-	0	ID=cds1335;Parent=gene1382;Dbxref=Genbank:YP_001035356.1,GeneID:4807365;Name=YP_001035356.1;Note=GC: 45.46%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;gene=rmlB;product=dTDP-glucose-4%2C6-dehydratase;protein_id=YP_001035356.1;transl_table=11
NC_009009.1	RefSeq	gene	1422583	1423176	.	-	.	ID=gene1383;Dbxref=GeneID:4806422;Name=rmlC;gbkey=Gene;gene=rmlC;gene_biotype=protein_coding;locus_tag=SSA_1410
NC_009009.1	RefSeq	CDS	1422583	1423176	.	-	0	ID=cds1336;Parent=gene1383;Dbxref=Genbank:YP_001035357.1,GeneID:4806422;Name=YP_001035357.1;Note=GC: 45.12%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;gene=rmlC;product=dTDP-4-keto-6-deoxyglucose-3%2C5-epimerase;protein_id=YP_001035357.1;transl_table=11
NC_009009.1	RefSeq	gene	1423181	1424050	.	-	.	ID=gene1384;Dbxref=GeneID:4805852;Name=rmlA;gbkey=Gene;gene=rmlA;gene_biotype=protein_coding;locus_tag=SSA_1411
NC_009009.1	RefSeq	CDS	1423181	1424050	.	-	0	ID=cds1337;Parent=gene1384;Dbxref=Genbank:YP_001035358.1,GeneID:4805852;Name=YP_001035358.1;Note=GC: 44.25%25%3B Codon Adaptation Index (CAI): 0.832.;gbkey=CDS;gene=rmlA;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_001035358.1;transl_table=11
NC_009009.1	RefSeq	gene	1424084	1424185	.	-	.	ID=gene1385;Dbxref=GeneID:4806509;Name=SSA_1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1412
NC_009009.1	RefSeq	CDS	1424084	1424185	.	-	0	ID=cds1338;Parent=gene1385;Dbxref=Genbank:YP_001035359.1,GeneID:4806509;Name=YP_001035359.1;Note=GC: 39.22%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035359.1;transl_table=11
NC_009009.1	RefSeq	gene	1424185	1425009	.	-	.	ID=gene1386;Dbxref=GeneID:4805944;Name=SSA_1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1413
NC_009009.1	RefSeq	CDS	1424185	1425009	.	-	0	ID=cds1339;Parent=gene1386;Dbxref=Genbank:YP_001035360.1,GeneID:4805944;Name=YP_001035360.1;Note=GC: 50.42%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.743.;gbkey=CDS;product=GufA-like protein;protein_id=YP_001035360.1;transl_table=11
NC_009009.1	RefSeq	gene	1425032	1425502	.	-	.	ID=gene1387;Dbxref=GeneID:4806653;Name=SSA_1414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1414
NC_009009.1	RefSeq	CDS	1425032	1425502	.	-	0	ID=cds1340;Parent=gene1387;Dbxref=Genbank:YP_001035361.1,GeneID:4806653;Name=YP_001035361.1;Note=GC: 42.68%25%3B Codon Adaptation Index (CAI): 0.737.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035361.1;transl_table=11
NC_009009.1	RefSeq	gene	1425504	1426598	.	-	.	ID=gene1388;Dbxref=GeneID:4806437;Name=SSA_1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1415
NC_009009.1	RefSeq	CDS	1425504	1426598	.	-	0	ID=cds1341;Parent=gene1388;Dbxref=Genbank:YP_001035362.1,GeneID:4806437;Name=YP_001035362.1;Note=GC: 49.41%25%3B Codon Adaptation Index (CAI): 0.769. LipoP prediction: SpI.;gbkey=CDS;product=oxidoreductase;protein_id=YP_001035362.1;transl_table=11
NC_009009.1	RefSeq	gene	1426610	1427407	.	-	.	ID=gene1389;Dbxref=GeneID:4806452;Name=SSA_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1416
NC_009009.1	RefSeq	CDS	1426610	1427407	.	-	0	ID=cds1342;Parent=gene1389;Dbxref=Genbank:YP_001035363.1,GeneID:4806452;Name=YP_001035363.1;Note=GC: 45.36%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035363.1;transl_table=11
NC_009009.1	RefSeq	gene	1427394	1428083	.	-	.	ID=gene1390;Dbxref=GeneID:4805819;Name=SSA_1417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1417
NC_009009.1	RefSeq	CDS	1427394	1428083	.	-	0	ID=cds1343;Parent=gene1390;Dbxref=Genbank:YP_001035364.1,GeneID:4805819;Name=YP_001035364.1;Note=GC: 48.55%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=YP_001035364.1;transl_table=11
NC_009009.1	RefSeq	gene	1428229	1429017	.	-	.	ID=gene1391;Dbxref=GeneID:4806638;Name=SSA_1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1418
NC_009009.1	RefSeq	CDS	1428229	1429017	.	-	0	ID=cds1344;Parent=gene1391;Dbxref=Genbank:YP_001035365.1,GeneID:4806638;Name=YP_001035365.1;Note=YghU%3B B2989%3B one of eight  glutathione transferase proteins from E. coli;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_001035365.1;transl_table=11
NC_009009.1	RefSeq	gene	1429085	1429765	.	-	.	ID=gene1392;Dbxref=GeneID:4806308;Name=dnaD;gbkey=Gene;gene=dnaD;gene_biotype=protein_coding;locus_tag=SSA_1419
NC_009009.1	RefSeq	CDS	1429085	1429765	.	-	0	ID=cds1345;Parent=gene1392;Dbxref=Genbank:YP_001035366.1,GeneID:4806308;Name=YP_001035366.1;Note=GC: 45.67%25%3B Codon Adaptation Index (CAI): 0.809.;gbkey=CDS;gene=dnaD;product=hypothetical protein;protein_id=YP_001035366.1;transl_table=11
NC_009009.1	RefSeq	gene	1429774	1430715	.	-	.	ID=gene1393;Dbxref=GeneID:4806697;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=SSA_1420
NC_009009.1	RefSeq	CDS	1429774	1430715	.	-	0	ID=cds1346;Parent=gene1393;Dbxref=Genbank:YP_001035367.1,GeneID:4806697;Name=YP_001035367.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;gene=metA;product=homoserine O-succinyltransferase;protein_id=YP_001035367.1;transl_table=11
NC_009009.1	RefSeq	gene	1430863	1431375	.	-	.	ID=gene1394;Dbxref=GeneID:4806139;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=SSA_1421
NC_009009.1	RefSeq	CDS	1430863	1431375	.	-	0	ID=cds1347;Parent=gene1394;Dbxref=Genbank:YP_001035368.1,GeneID:4806139;Name=YP_001035368.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=YP_001035368.1;transl_table=11
NC_009009.1	RefSeq	gene	1431472	1431645	.	-	.	ID=gene1395;Dbxref=GeneID:4807453;Name=SSA_1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1422
NC_009009.1	RefSeq	CDS	1431472	1431645	.	-	0	ID=cds1348;Parent=gene1395;Dbxref=Genbank:YP_001035369.1,GeneID:4807453;Name=YP_001035369.1;Note=GC: 37.36%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035369.1;transl_table=11
NC_009009.1	RefSeq	gene	1431651	1433873	.	-	.	ID=gene1396;Dbxref=GeneID:4807539;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=SSA_1423
NC_009009.1	RefSeq	CDS	1431651	1433873	.	-	0	ID=cds1349;Parent=gene1396;Dbxref=Genbank:YP_001035370.1,GeneID:4807539;Name=YP_001035370.1;Note=GC: 46.24%25%3B Codon Adaptation Index (CAI): 0.791. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=recJ;product=single-stranded DNA-specific exonuclease%2C 5'-3';protein_id=YP_001035370.1;transl_table=11
NC_009009.1	RefSeq	gene	1433979	1434569	.	-	.	ID=gene1397;Dbxref=GeneID:4807699;Name=SSA_1424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1424
NC_009009.1	RefSeq	CDS	1433979	1434569	.	-	0	ID=cds1350;Parent=gene1397;Dbxref=Genbank:YP_001035371.1,GeneID:4807699;Name=YP_001035371.1;Note=GC: 46.02%25%3B Codon Adaptation Index (CAI): 0.769.;gbkey=CDS;product=hydrolase;protein_id=YP_001035371.1;transl_table=11
NC_009009.1	RefSeq	gene	1434634	1435669	.	-	.	ID=gene1398;Dbxref=GeneID:4806449;Name=SSA_1425;Note=Conserved hypothetical protein (pseudogene). GC: 43.44%25. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.722.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SSA_1425;pseudo=true
NC_009009.1	RefSeq	gene	1435728	1436438	.	-	.	ID=gene1399;Dbxref=GeneID:4807790;Name=SSA_1428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1428
NC_009009.1	RefSeq	CDS	1435728	1436438	.	-	0	ID=cds1351;Parent=gene1399;Dbxref=Genbank:YP_001035372.1,GeneID:4807790;Name=YP_001035372.1;Note=GC: 44.16%25%3B Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035372.1;transl_table=11
NC_009009.1	RefSeq	gene	1436445	1437200	.	-	.	ID=gene1400;Dbxref=GeneID:4806512;Name=SSA_1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1429
NC_009009.1	RefSeq	CDS	1436445	1437200	.	-	0	ID=cds1352;Parent=gene1400;Dbxref=Genbank:YP_001035373.1,GeneID:4806512;Name=YP_001035373.1;Note=GC: 44.71%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035373.1;transl_table=11
NC_009009.1	RefSeq	gene	1437197	1438126	.	-	.	ID=gene1401;Dbxref=GeneID:4807483;Name=elaC;gbkey=Gene;gene=elaC;gene_biotype=protein_coding;locus_tag=SSA_1430
NC_009009.1	RefSeq	CDS	1437197	1438126	.	-	0	ID=cds1353;Parent=gene1401;Dbxref=Genbank:YP_001035374.1,GeneID:4807483;Name=YP_001035374.1;Note=member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;gbkey=CDS;gene=elaC;product=ribonuclease Z;protein_id=YP_001035374.1;transl_table=11
NC_009009.1	RefSeq	gene	1438137	1438820	.	-	.	ID=gene1402;Dbxref=GeneID:4806546;Name=SSA_1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1431
NC_009009.1	RefSeq	CDS	1438137	1438820	.	-	0	ID=cds1354;Parent=gene1402;Dbxref=Genbank:YP_001035375.1,GeneID:4806546;Name=YP_001035375.1;Note=GC: 45.91%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035375.1;transl_table=11
NC_009009.1	RefSeq	gene	1438753	1439991	.	-	.	ID=gene1403;Dbxref=GeneID:4807722;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=SSA_1432
NC_009009.1	RefSeq	CDS	1438753	1439991	.	-	0	ID=cds1355;Parent=gene1403;Dbxref=Genbank:YP_001035376.1,GeneID:4807722;Name=YP_001035376.1;Note=GC: 48.35%25%3B Codon Adaptation Index (CAI): 0.778. Curator(s): J. Alves;gbkey=CDS;gene=hflX;product=HflX GTPase;protein_id=YP_001035376.1;transl_table=11
NC_009009.1	RefSeq	gene	1440023	1440907	.	-	.	ID=gene1404;Dbxref=GeneID:4808005;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SSA_1433
NC_009009.1	RefSeq	CDS	1440023	1440907	.	-	0	ID=cds1356;Parent=gene1404;Dbxref=Genbank:YP_001035377.1,GeneID:4808005;Name=YP_001035377.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=YP_001035377.1;transl_table=11
NC_009009.1	RefSeq	gene	1440990	1441160	.	+	.	ID=gene1405;Dbxref=GeneID:4807802;Name=SSA_1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1434
NC_009009.1	RefSeq	CDS	1440990	1441160	.	+	0	ID=cds1357;Parent=gene1405;Dbxref=Genbank:YP_001035378.1,GeneID:4807802;Name=YP_001035378.1;Note=GC: 43.86%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.807. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.996)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035378.1;transl_table=11
NC_009009.1	RefSeq	gene	1441841	1442302	.	-	.	ID=gene1406;Dbxref=GeneID:4806322;Name=SSA_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1435
NC_009009.1	RefSeq	CDS	1441841	1442302	.	-	0	ID=cds1358;Parent=gene1406;Dbxref=Genbank:YP_001035379.1,GeneID:4806322;Name=YP_001035379.1;Note=GC: 37.66%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035379.1;transl_table=11
NC_009009.1	RefSeq	gene	1442289	1443215	.	-	.	ID=gene1407;Dbxref=GeneID:4807467;Name=SSA_1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1436
NC_009009.1	RefSeq	CDS	1442289	1443215	.	-	0	ID=cds1359;Parent=gene1407;Dbxref=Genbank:YP_001035380.1,GeneID:4807467;Name=YP_001035380.1;Note=GC: 35.92%25%3B Codon Adaptation Index (CAI): 0.764. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035380.1;transl_table=11
NC_009009.1	RefSeq	gene	1443232	1443702	.	-	.	ID=gene1408;Dbxref=GeneID:4805808;Name=SSA_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1438
NC_009009.1	RefSeq	CDS	1443232	1443702	.	-	0	ID=cds1360;Parent=gene1408;Dbxref=Genbank:YP_001035381.1,GeneID:4805808;Name=YP_001035381.1;Note=GC: 45.86%25%3B Codon Adaptation Index (CAI): 0.739.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035381.1;transl_table=11
NC_009009.1	RefSeq	gene	1443714	1444463	.	-	.	ID=gene1409;Dbxref=GeneID:4807776;Name=hisK;gbkey=Gene;gene=hisK;gene_biotype=protein_coding;locus_tag=SSA_1439
NC_009009.1	RefSeq	CDS	1443714	1444463	.	-	0	ID=cds1361;Parent=gene1409;Dbxref=Genbank:YP_001035382.1,GeneID:4807776;Name=YP_001035382.1;Note=GC: 47.87%25%3B Codon Adaptation Index (CAI): 0.728.;gbkey=CDS;gene=hisK;product=hypothetical protein;protein_id=YP_001035382.1;transl_table=11
NC_009009.1	RefSeq	gene	1444497	1444811	.	-	.	ID=gene1410;Dbxref=GeneID:4807559;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=SSA_1440
NC_009009.1	RefSeq	CDS	1444497	1444811	.	-	0	ID=cds1362;Parent=gene1410;Dbxref=Genbank:YP_001035383.1,GeneID:4807559;Name=YP_001035383.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis;gbkey=CDS;gene=hisE;product=phosphoribosyl-ATP pyrophosphatase;protein_id=YP_001035383.1;transl_table=11
NC_009009.1	RefSeq	gene	1444929	1445273	.	-	.	ID=gene1411;Dbxref=GeneID:4807562;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=SSA_1441
NC_009009.1	RefSeq	CDS	1444929	1445273	.	-	0	ID=cds1363;Parent=gene1411;Dbxref=Genbank:YP_001035384.1,GeneID:4807562;Name=YP_001035384.1;Note=GC: 48.12%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;gene=hisI;product=phosphoribosyl-AMP cyclohydrolase;protein_id=YP_001035384.1;transl_table=11
NC_009009.1	RefSeq	gene	1445273	1446031	.	-	.	ID=gene1412;Dbxref=GeneID:4806015;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=SSA_1442
NC_009009.1	RefSeq	CDS	1445273	1446031	.	-	0	ID=cds1364;Parent=gene1412;Dbxref=Genbank:YP_001035385.1,GeneID:4806015;Name=YP_001035385.1;Note=catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase;gbkey=CDS;gene=hisF;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=YP_001035385.1;transl_table=11
NC_009009.1	RefSeq	gene	1446034	1446762	.	-	.	ID=gene1413;Dbxref=GeneID:4805865;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=SSA_1443
NC_009009.1	RefSeq	CDS	1446034	1446762	.	-	0	ID=cds1365;Parent=gene1413;Dbxref=Genbank:YP_001035386.1,GeneID:4805865;Name=YP_001035386.1;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide;gbkey=CDS;gene=hisA;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=YP_001035386.1;transl_table=11
NC_009009.1	RefSeq	gene	1446734	1447357	.	-	.	ID=gene1414;Dbxref=GeneID:4807800;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=SSA_1444
NC_009009.1	RefSeq	CDS	1446734	1447357	.	-	0	ID=cds1366;Parent=gene1414;Dbxref=Genbank:YP_001035387.1,GeneID:4807800;Name=YP_001035387.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=YP_001035387.1;transl_table=11
NC_009009.1	RefSeq	gene	1447392	1447976	.	-	.	ID=gene1415;Dbxref=GeneID:4807725;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=SSA_1445
NC_009009.1	RefSeq	CDS	1447392	1447976	.	-	0	ID=cds1367;Parent=gene1415;Dbxref=Genbank:YP_001035388.1,GeneID:4807725;Name=YP_001035388.1;Note=catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis;gbkey=CDS;gene=hisB;product=imidazoleglycerol-phosphate dehydratase;protein_id=YP_001035388.1;transl_table=11
NC_009009.1	RefSeq	gene	1447988	1449280	.	-	.	ID=gene1416;Dbxref=GeneID:4806096;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=SSA_1446
NC_009009.1	RefSeq	CDS	1447988	1449280	.	-	0	ID=cds1368;Parent=gene1416;Dbxref=Genbank:YP_001035389.1,GeneID:4806096;Name=YP_001035389.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=YP_001035389.1;transl_table=11
NC_009009.1	RefSeq	gene	1449277	1449921	.	-	.	ID=gene1417;Dbxref=GeneID:4807459;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=SSA_1447
NC_009009.1	RefSeq	CDS	1449277	1449921	.	-	0	ID=cds1369;Parent=gene1417;Dbxref=Genbank:YP_001035390.1,GeneID:4807459;Name=YP_001035390.1;Note=short form of enzyme%3B requires HisZ for function%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms heteromultimer of HisG and HisZ;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=YP_001035390.1;transl_table=11
NC_009009.1	RefSeq	gene	1449918	1450907	.	-	.	ID=gene1418;Dbxref=GeneID:4806597;Name=hisZ;gbkey=Gene;gene=hisZ;gene_biotype=protein_coding;locus_tag=SSA_1448
NC_009009.1	RefSeq	CDS	1449918	1450907	.	-	0	ID=cds1370;Parent=gene1418;Dbxref=Genbank:YP_001035391.1,GeneID:4806597;Name=YP_001035391.1;Note=GC: 49.8%25%3B Codon Adaptation Index (CAI): 0.73.;gbkey=CDS;gene=hisZ;product=ATP phosphoribosyltransferase;protein_id=YP_001035391.1;transl_table=11
NC_009009.1	RefSeq	gene	1450963	1452021	.	-	.	ID=gene1419;Dbxref=GeneID:4805853;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=SSA_1449
NC_009009.1	RefSeq	CDS	1450963	1452021	.	-	0	ID=cds1371;Parent=gene1419;Dbxref=Genbank:YP_001035392.1,GeneID:4805853;Name=YP_001035392.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;gene=hisC;product=histidinol-phosphate aminotransferase;protein_id=YP_001035392.1;transl_table=11
NC_009009.1	RefSeq	gene	1452495	1452800	.	-	.	ID=gene1420;Dbxref=GeneID:4806317;Name=SSA_1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1450
NC_009009.1	RefSeq	CDS	1452495	1452800	.	-	0	ID=cds1372;Parent=gene1420;Dbxref=Genbank:YP_001035393.1,GeneID:4806317;Name=YP_001035393.1;Note=GC: 41.18%25%3B Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035393.1;transl_table=11
NC_009009.1	RefSeq	gene	1452834	1456508	.	-	.	ID=gene1421;Dbxref=GeneID:4806705;Name=rexA;gbkey=Gene;gene=rexA;gene_biotype=protein_coding;locus_tag=SSA_1451
NC_009009.1	RefSeq	CDS	1452834	1456508	.	-	0	ID=cds1373;Parent=gene1421;Dbxref=Genbank:YP_001035394.1,GeneID:4806705;Name=YP_001035394.1;Note=GC: 47.89%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;gene=rexA;product=exonuclease RexA;protein_id=YP_001035394.1;transl_table=11
NC_009009.1	RefSeq	gene	1456505	1459786	.	-	.	ID=gene1422;Dbxref=GeneID:4806777;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=SSA_1452
NC_009009.1	RefSeq	CDS	1456505	1459786	.	-	0	ID=cds1374;Parent=gene1422;Dbxref=Genbank:YP_001035395.1,GeneID:4806777;Name=YP_001035395.1;Note=GC: 49.12%25%3B Codon Adaptation Index (CAI): 0.769.;gbkey=CDS;gene=rexB;product=second subunit of major exonuclease;protein_id=YP_001035395.1;transl_table=11
NC_009009.1	RefSeq	gene	1459987	1460298	.	-	.	ID=gene1423;Dbxref=GeneID:4806816;Name=SSA_1453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1453
NC_009009.1	RefSeq	CDS	1459987	1460298	.	-	0	ID=cds1375;Parent=gene1423;Dbxref=Genbank:YP_001035396.1,GeneID:4806816;Name=YP_001035396.1;Note=GC: 43.27%25%3B Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035396.1;transl_table=11
NC_009009.1	RefSeq	gene	1460345	1461190	.	-	.	ID=gene1424;Dbxref=GeneID:4806778;Name=SSA_1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1454
NC_009009.1	RefSeq	CDS	1460345	1461190	.	-	0	ID=cds1376;Parent=gene1424;Dbxref=Genbank:YP_001035397.1,GeneID:4806778;Name=YP_001035397.1;Note=GC: 41.25%25%3B Codon Adaptation Index (CAI): 0.771. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035397.1;transl_table=11
NC_009009.1	RefSeq	gene	1461224	1461766	.	-	.	ID=gene1425;Dbxref=GeneID:4806673;Name=SSA_1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1455
NC_009009.1	RefSeq	CDS	1461224	1461766	.	-	0	ID=cds1377;Parent=gene1425;Dbxref=Genbank:YP_001035398.1,GeneID:4806673;Name=YP_001035398.1;Note=GC: 39.23%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035398.1;transl_table=11
NC_009009.1	RefSeq	gene	1461796	1462206	.	-	.	ID=gene1426;Dbxref=GeneID:4807788;Name=doc;gbkey=Gene;gene=doc;gene_biotype=protein_coding;locus_tag=SSA_2383
NC_009009.1	RefSeq	CDS	1461796	1462206	.	-	0	ID=cds1378;Parent=gene1426;Dbxref=Genbank:YP_001035399.1,GeneID:4807788;Name=YP_001035399.1;Note=GC: 30.39%25%3B Codon Adaptation Index (CAI): 0.762. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;gene=doc;product=prophage maintenance system killer protein (DOC: death-on-curing);protein_id=YP_001035399.1;transl_table=11
NC_009009.1	RefSeq	gene	1462203	1462439	.	-	.	ID=gene1427;Dbxref=GeneID:4807847;Name=SSA_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1456
NC_009009.1	RefSeq	CDS	1462203	1462439	.	-	0	ID=cds1379;Parent=gene1427;Dbxref=Genbank:YP_001035400.1,GeneID:4807847;Name=YP_001035400.1;Note=GC: 31.22%25%3B Codon Adaptation Index (CAI): 0.809.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035400.1;transl_table=11
NC_009009.1	RefSeq	gene	1462575	1464329	.	-	.	ID=gene1428;Dbxref=GeneID:4807672;Name=dexB;gbkey=Gene;gene=dexB;gene_biotype=protein_coding;locus_tag=SSA_1457
NC_009009.1	RefSeq	CDS	1462575	1464329	.	-	0	ID=cds1380;Parent=gene1428;Dbxref=Genbank:YP_001035401.1,GeneID:4807672;Name=YP_001035401.1;Note=GC: 41.71%25%3B Codon Adaptation Index (CAI): 0.767. Curator(s): J. Alves;gbkey=CDS;gene=dexB;product=neopullulanase;protein_id=YP_001035401.1;transl_table=11
NC_009009.1	RefSeq	gene	1464559	1465437	.	-	.	ID=gene1429;Dbxref=GeneID:4806756;Name=SSA_1458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1458
NC_009009.1	RefSeq	CDS	1464559	1465437	.	-	0	ID=cds1381;Parent=gene1429;Dbxref=Genbank:YP_001035402.1,GeneID:4806756;Name=YP_001035402.1;Note=GC: 34.36%25%3B Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035402.1;transl_table=11
NC_009009.1	RefSeq	gene	1465558	1465986	.	-	.	ID=gene1430;Dbxref=GeneID:4806396;Name=SSA_2384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2384
NC_009009.1	RefSeq	CDS	1465558	1465986	.	-	0	ID=cds1382;Parent=gene1430;Dbxref=Genbank:YP_001035403.1,GeneID:4806396;Name=YP_001035403.1;Note=GC: 31.85%25%3B Codon Adaptation Index (CAI): 0.789. Curator(s): T. Kitten;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035403.1;transl_table=11
NC_009009.1	RefSeq	gene	1466201	1467571	.	-	.	ID=gene1431;Dbxref=GeneID:4806513;Name=SSA_1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1459
NC_009009.1	RefSeq	CDS	1466201	1467571	.	-	0	ID=cds1383;Parent=gene1431;Dbxref=Genbank:YP_001035404.1,GeneID:4806513;Name=YP_001035404.1;Note=GC: 47.78%25%3B Codon Adaptation Index (CAI): 0.76.;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_001035404.1;transl_table=11
NC_009009.1	RefSeq	gene	1467656	1469005	.	-	.	ID=gene1432;Dbxref=GeneID:4807945;Name=SSA_1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1460
NC_009009.1	RefSeq	CDS	1467656	1469005	.	-	0	ID=cds1384;Parent=gene1432;Dbxref=Genbank:YP_001035405.1,GeneID:4807945;Name=YP_001035405.1;Note=GC: 47.7%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.789. Capsular polysaccharide biosynthesis-related transcriptional attenuator. Curator(s): J. Alves;gbkey=CDS;product=LytR family transcriptional regulator;protein_id=YP_001035405.1;transl_table=11
NC_009009.1	RefSeq	gene	1469024	1469857	.	-	.	ID=gene1433;Dbxref=GeneID:4806009;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=SSA_1462
NC_009009.1	RefSeq	CDS	1469024	1469857	.	-	0	ID=cds1385;Parent=gene1433;Dbxref=Genbank:YP_001035406.1,GeneID:4806009;Name=YP_001035406.1;Note=catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=prephenate dehydratase;protein_id=YP_001035406.1;transl_table=11
NC_009009.1	RefSeq	gene	1469854	1470330	.	-	.	ID=gene1434;Dbxref=GeneID:4806988;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SSA_1463
NC_009009.1	RefSeq	CDS	1469854	1470330	.	-	0	ID=cds1386;Parent=gene1434;Dbxref=Genbank:YP_001035407.1,GeneID:4806988;Name=YP_001035407.1;Note=GC: 49.69%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=YP_001035407.1;transl_table=11
NC_009009.1	RefSeq	gene	1470323	1471606	.	-	.	ID=gene1435;Dbxref=GeneID:4806999;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=SSA_1464
NC_009009.1	RefSeq	CDS	1470323	1471606	.	-	0	ID=cds1387;Parent=gene1435;Dbxref=Genbank:YP_001035408.1,GeneID:4806999;Name=YP_001035408.1;Note=catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=YP_001035408.1;transl_table=11
NC_009009.1	RefSeq	gene	1471738	1472076	.	-	.	ID=gene1436;Dbxref=GeneID:4807199;Name=SSA_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1465
NC_009009.1	RefSeq	CDS	1471738	1472076	.	-	0	ID=cds1388;Parent=gene1436;Dbxref=Genbank:YP_001035409.1,GeneID:4807199;Name=YP_001035409.1;Note=GC: 45.72%25%3B Codon Adaptation Index (CAI): 0.816. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035409.1;transl_table=11
NC_009009.1	RefSeq	gene	1472095	1473201	.	-	.	ID=gene1437;Dbxref=GeneID:4806920;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=SSA_1466
NC_009009.1	RefSeq	CDS	1472095	1473201	.	-	0	ID=cds1389;Parent=gene1437;Dbxref=Genbank:YP_001035410.1,GeneID:4806920;Name=YP_001035410.1;Note=catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate;gbkey=CDS;gene=tyrA;product=prephenate dehydrogenase;protein_id=YP_001035410.1;transl_table=11
NC_009009.1	RefSeq	gene	1473217	1474383	.	-	.	ID=gene1438;Dbxref=GeneID:4807171;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=SSA_1467
NC_009009.1	RefSeq	CDS	1473217	1474383	.	-	0	ID=cds1390;Parent=gene1438;Dbxref=Genbank:YP_001035411.1,GeneID:4807171;Name=YP_001035411.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=YP_001035411.1;transl_table=11
NC_009009.1	RefSeq	gene	1474475	1475542	.	-	.	ID=gene1439;Dbxref=GeneID:4807009;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SSA_1468
NC_009009.1	RefSeq	CDS	1474475	1475542	.	-	0	ID=cds1391;Parent=gene1439;Dbxref=Genbank:YP_001035412.1,GeneID:4807009;Name=YP_001035412.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=YP_001035412.1;transl_table=11
NC_009009.1	RefSeq	gene	1475553	1476407	.	-	.	ID=gene1440;Dbxref=GeneID:4807131;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=SSA_1469
NC_009009.1	RefSeq	CDS	1475553	1476407	.	-	0	ID=cds1392;Parent=gene1440;Dbxref=Genbank:YP_001035413.1,GeneID:4807131;Name=YP_001035413.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=YP_001035413.1;transl_table=11
NC_009009.1	RefSeq	gene	1476397	1477074	.	-	.	ID=gene1441;Dbxref=GeneID:4807634;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=SSA_1470
NC_009009.1	RefSeq	CDS	1476397	1477074	.	-	0	ID=cds1393;Parent=gene1441;Dbxref=Genbank:YP_001035414.1,GeneID:4807634;Name=YP_001035414.1;Note=catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroD;product=3-dehydroquinate dehydratase;protein_id=YP_001035414.1;transl_table=11
NC_009009.1	RefSeq	gene	1477071	1478234	.	-	.	ID=gene1442;Dbxref=GeneID:4807144;Name=SSA_1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1471
NC_009009.1	RefSeq	CDS	1477071	1478234	.	-	0	ID=cds1394;Parent=gene1442;Dbxref=Genbank:YP_001035415.1,GeneID:4807144;Name=YP_001035415.1;Note=GC: 43.56%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035415.1;transl_table=11
NC_009009.1	RefSeq	gene	1478575	1478745	.	-	.	ID=gene1443;Dbxref=GeneID:4806779;Name=SSA_1472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1472
NC_009009.1	RefSeq	CDS	1478575	1478745	.	-	0	ID=cds1395;Parent=gene1443;Dbxref=Genbank:YP_001035416.1,GeneID:4806779;Name=YP_001035416.1;Note=GC: 33.92%25%3B Codon Adaptation Index (CAI): 0.719.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035416.1;transl_table=11
NC_009009.1	RefSeq	gene	1478819	1479010	.	-	.	ID=gene1444;Dbxref=GeneID:4807677;Name=SSA_1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1473
NC_009009.1	RefSeq	CDS	1478819	1479010	.	-	0	ID=cds1396;Parent=gene1444;Dbxref=Genbank:YP_001035417.1,GeneID:4807677;Name=YP_001035417.1;Note=GC: 40.1%25%3B Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035417.1;transl_table=11
NC_009009.1	RefSeq	gene	1479157	1479831	.	-	.	ID=gene1445;Dbxref=GeneID:4806568;Name=SSA_1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1474
NC_009009.1	RefSeq	CDS	1479157	1479831	.	-	0	ID=cds1397;Parent=gene1445;Dbxref=Genbank:YP_001035418.1,GeneID:4806568;Name=YP_001035418.1;Note=GC: 34.52%25%3B Codon Adaptation Index (CAI): 0.727. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.754).;gbkey=CDS;product=lipoprotein;protein_id=YP_001035418.1;transl_table=11
NC_009009.1	RefSeq	gene	1480065	1480211	.	-	.	ID=gene1446;Dbxref=GeneID:4807069;Name=SSA_1475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1475
NC_009009.1	RefSeq	CDS	1480065	1480211	.	-	0	ID=cds1398;Parent=gene1446;Dbxref=Genbank:YP_001035419.1,GeneID:4807069;Name=YP_001035419.1;Note=GC: 31.97%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035419.1;transl_table=11
NC_009009.1	RefSeq	gene	1480313	1482508	.	+	.	ID=gene1447;Dbxref=GeneID:4807548;Name=SSA_1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1476
NC_009009.1	RefSeq	CDS	1480313	1482508	.	+	0	ID=cds1399;Parent=gene1447;Dbxref=Genbank:YP_001035420.1,GeneID:4807548;Name=YP_001035420.1;Note=GC: 44.72%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.757. SignalP prediction: Yes (prob. 0.556).;gbkey=CDS;product=phosphoglycerol transferase alkaline phosphatase superfamily protein;protein_id=YP_001035420.1;transl_table=11
NC_009009.1	RefSeq	gene	1482636	1482974	.	+	.	ID=gene1448;Dbxref=GeneID:4806335;Name=SSA_1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1477
NC_009009.1	RefSeq	CDS	1482636	1482974	.	+	0	ID=cds1400;Parent=gene1448;Dbxref=Genbank:YP_001035421.1,GeneID:4806335;Name=YP_001035421.1;Note=GC: 38.94%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=transposase;protein_id=YP_001035421.1;transl_table=11
NC_009009.1	RefSeq	gene	1483029	1483184	.	+	.	ID=gene1449;Dbxref=GeneID:4807196;Name=SSA_1478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1478
NC_009009.1	RefSeq	CDS	1483029	1483184	.	+	0	ID=cds1401;Parent=gene1449;Dbxref=Genbank:YP_001035422.1,GeneID:4807196;Name=YP_001035422.1;Note=GC: 44.23%25%3B Codon Adaptation Index (CAI): 0.753. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=transposase;protein_id=YP_001035422.1;transl_table=11
NC_009009.1	RefSeq	gene	1483320	1483949	.	+	.	ID=gene1450;Dbxref=GeneID:4807347;Name=SSA_1479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1479
NC_009009.1	RefSeq	CDS	1483320	1483949	.	+	0	ID=cds1402;Parent=gene1450;Dbxref=Genbank:YP_001035423.1,GeneID:4807347;Name=YP_001035423.1;Note=GC: 38.73%25%3B Codon Adaptation Index (CAI): 0.749.;gbkey=CDS;product=transposase;protein_id=YP_001035423.1;transl_table=11
NC_009009.1	RefSeq	gene	1484050	1484901	.	-	.	ID=gene1451;Dbxref=GeneID:4808036;Name=SSA_1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1480
NC_009009.1	RefSeq	CDS	1484050	1484901	.	-	0	ID=cds1403;Parent=gene1451;Dbxref=Genbank:YP_001035424.1,GeneID:4808036;Name=YP_001035424.1;Note=GC: 46.24%25%3B Codon Adaptation Index (CAI): 0.751. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035424.1;transl_table=11
NC_009009.1	RefSeq	gene	1484916	1486712	.	-	.	ID=gene1452;Dbxref=GeneID:4807994;Name=SSA_1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1481
NC_009009.1	RefSeq	CDS	1484916	1486712	.	-	0	ID=cds1404;Parent=gene1452;Dbxref=Genbank:YP_001035425.1,GeneID:4807994;Name=YP_001035425.1;Note=GC: 46.74%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.755. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=FmtA-like protein;protein_id=YP_001035425.1;transl_table=11
NC_009009.1	RefSeq	gene	1487039	1489336	.	-	.	ID=gene1453;Dbxref=GeneID:4806665;Name=pulI;gbkey=Gene;gene=pulI;gene_biotype=protein_coding;locus_tag=SSA_1482
NC_009009.1	RefSeq	CDS	1487039	1489336	.	-	0	ID=cds1405;Parent=gene1453;Dbxref=Genbank:YP_001035426.1,GeneID:4806665;Name=YP_001035426.1;Note=GC: 45.69%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;gene=pulI;product=pullulanase;protein_id=YP_001035426.1;transl_table=11
NC_009009.1	RefSeq	gene	1489360	1490310	.	-	.	ID=gene1454;Dbxref=GeneID:4806320;Name=SSA_1483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1483
NC_009009.1	RefSeq	CDS	1489360	1490310	.	-	0	ID=cds1406;Parent=gene1454;Dbxref=Genbank:YP_001035427.1,GeneID:4806320;Name=YP_001035427.1;Note=similar to YegS from E. coli;gbkey=CDS;product=lipid kinase;protein_id=YP_001035427.1;transl_table=11
NC_009009.1	RefSeq	gene	1490320	1492278	.	-	.	ID=gene1455;Dbxref=GeneID:4806523;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SSA_1484
NC_009009.1	RefSeq	CDS	1490320	1492278	.	-	0	ID=cds1407;Parent=gene1455;Dbxref=Genbank:YP_001035428.1,GeneID:4806523;Name=YP_001035428.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=YP_001035428.1;transl_table=11
NC_009009.1	RefSeq	gene	1492384	1492899	.	-	.	ID=gene1456;Dbxref=GeneID:4805947;Name=ccl;gbkey=Gene;gene=ccl;gene_biotype=protein_coding;locus_tag=SSA_1485
NC_009009.1	RefSeq	CDS	1492384	1492899	.	-	0	ID=cds1408;Parent=gene1456;Dbxref=Genbank:YP_001035429.1,GeneID:4805947;Name=YP_001035429.1;Note=GC: 37.98%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.808.;gbkey=CDS;gene=ccl;product=citrulline cluster-linked gene;protein_id=YP_001035429.1;transl_table=11
NC_009009.1	RefSeq	gene	1493062	1493502	.	+	.	ID=gene1457;Dbxref=GeneID:4806253;Name=mesH;gbkey=Gene;gene=mesH;gene_biotype=protein_coding;locus_tag=SSA_1486
NC_009009.1	RefSeq	CDS	1493062	1493502	.	+	0	ID=cds1409;Parent=gene1457;Dbxref=Genbank:YP_001035430.1,GeneID:4806253;Name=YP_001035430.1;Note=GC: 35.83%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;gene=mesH;product=hypothetical protein;protein_id=YP_001035430.1;transl_table=11
NC_009009.1	RefSeq	gene	1493573	1494280	.	-	.	ID=gene1458;Dbxref=GeneID:4806201;Name=SSA_1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1487
NC_009009.1	RefSeq	CDS	1493573	1494280	.	-	0	ID=cds1410;Parent=gene1458;Dbxref=Genbank:YP_001035431.1,GeneID:4806201;Name=YP_001035431.1;Note=GC: 46.47%25%3B Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035431.1;transl_table=11
NC_009009.1	RefSeq	gene	1494298	1494747	.	-	.	ID=gene1459;Dbxref=GeneID:4806761;Name=SSA_1488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1488
NC_009009.1	RefSeq	CDS	1494298	1494747	.	-	0	ID=cds1411;Parent=gene1459;Dbxref=Genbank:YP_001035432.1,GeneID:4806761;Name=YP_001035432.1;Note=GC: 46.44%25%3B Codon Adaptation Index (CAI): 0.748. Curator(s): J. Alves;gbkey=CDS;product=multiple antibiotic resistance operon transcription repressor MarR;protein_id=YP_001035432.1;transl_table=11
NC_009009.1	RefSeq	gene	1494868	1495878	.	-	.	ID=gene1460;Dbxref=GeneID:4806601;Name=SSA_1489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1489
NC_009009.1	RefSeq	CDS	1494868	1495878	.	-	0	ID=cds1412;Parent=gene1460;Dbxref=Genbank:YP_001035433.1,GeneID:4806601;Name=YP_001035433.1;Note=GC: 32.05%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.966).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035433.1;transl_table=11
NC_009009.1	RefSeq	gene	1495911	1496822	.	-	.	ID=gene1461;Dbxref=GeneID:4806479;Name=SSA_1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1490
NC_009009.1	RefSeq	CDS	1495911	1496822	.	-	0	ID=cds1413;Parent=gene1461;Dbxref=Genbank:YP_001035434.1,GeneID:4806479;Name=YP_001035434.1;Note=GC: 42.21%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=ribonuclease BN;protein_id=YP_001035434.1;transl_table=11
NC_009009.1	RefSeq	gene	1496870	1497727	.	-	.	ID=gene1462;Dbxref=GeneID:4806167;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=SSA_1491
NC_009009.1	RefSeq	CDS	1496870	1497727	.	-	0	ID=cds1414;Parent=gene1462;Dbxref=Genbank:YP_001035435.1,GeneID:4806167;Name=YP_001035435.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=YP_001035435.1;transl_table=11
NC_009009.1	RefSeq	gene	1497749	1499044	.	-	.	ID=gene1463;Dbxref=GeneID:4806084;Name=SSA_1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1492
NC_009009.1	RefSeq	CDS	1497749	1499044	.	-	0	ID=cds1415;Parent=gene1463;Dbxref=Genbank:YP_001035436.1,GeneID:4806084;Name=YP_001035436.1;Note=GC: 46.53%25%3B Codon Adaptation Index (CAI): 0.785. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035436.1;transl_table=11
NC_009009.1	RefSeq	gene	1499019	1499570	.	-	.	ID=gene1464;Dbxref=GeneID:4806353;Name=SSA_1493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1493
NC_009009.1	RefSeq	CDS	1499019	1499570	.	-	0	ID=cds1416;Parent=gene1464;Dbxref=Genbank:YP_001035437.1,GeneID:4806353;Name=YP_001035437.1;Note=GC: 44.02%25%3B Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035437.1;transl_table=11
NC_009009.1	RefSeq	gene	1499604	1500863	.	-	.	ID=gene1465;Dbxref=GeneID:4806187;Name=murZ;gbkey=Gene;gene=murZ;gene_biotype=protein_coding;locus_tag=SSA_1494
NC_009009.1	RefSeq	CDS	1499604	1500863	.	-	0	ID=cds1417;Parent=gene1465;Dbxref=Genbank:YP_001035438.1,GeneID:4806187;Name=YP_001035438.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murZ;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_001035438.1;transl_table=11
NC_009009.1	RefSeq	gene	1501109	1502299	.	-	.	ID=gene1466;Dbxref=GeneID:4805869;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=SSA_1495
NC_009009.1	RefSeq	CDS	1501109	1502299	.	-	0	ID=cds1418;Parent=gene1466;Dbxref=Genbank:YP_001035439.1,GeneID:4805869;Name=YP_001035439.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=YP_001035439.1;transl_table=11
NC_009009.1	RefSeq	gene	1502563	1502994	.	-	.	ID=gene1467;Dbxref=GeneID:4805938;Name=SSA_1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1496
NC_009009.1	RefSeq	CDS	1502563	1502994	.	-	0	ID=cds1419;Parent=gene1467;Dbxref=Genbank:YP_001035440.1,GeneID:4805938;Name=YP_001035440.1;Note=GC: 35.42%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035440.1;transl_table=11
NC_009009.1	RefSeq	gene	1503158	1503625	.	-	.	ID=gene1468;Dbxref=GeneID:4806602;Name=comEB;gbkey=Gene;gene=comEB;gene_biotype=protein_coding;locus_tag=SSA_1497
NC_009009.1	RefSeq	CDS	1503158	1503625	.	-	0	ID=cds1420;Parent=gene1468;Dbxref=Genbank:YP_001035441.1,GeneID:4806602;Name=YP_001035441.1;Note=GC: 48.08%25%3B Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;gene=comEB;product=dCMP deaminase;protein_id=YP_001035441.1;transl_table=11
NC_009009.1	RefSeq	gene	1503843	1504202	.	-	.	ID=gene1469;Dbxref=GeneID:4806666;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SSA_1498
NC_009009.1	RefSeq	CDS	1503843	1504202	.	-	0	ID=cds1421;Parent=gene1469;Dbxref=Genbank:YP_001035442.1,GeneID:4806666;Name=YP_001035442.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=YP_001035442.1;transl_table=11
NC_009009.1	RefSeq	gene	1504247	1504447	.	-	.	ID=gene1470;Dbxref=GeneID:4805810;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SSA_1499
NC_009009.1	RefSeq	CDS	1504247	1504447	.	-	0	ID=cds1422;Parent=gene1470;Dbxref=Genbank:YP_001035443.1,GeneID:4805810;Name=YP_001035443.1;Note=GC: 44.78%25%3B Codon Adaptation Index (CAI): 0.823. SignalP prediction: Yes (prob. 0.488).;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=YP_001035443.1;transl_table=11
NC_009009.1	RefSeq	gene	1504481	1505011	.	-	.	ID=gene1471;Dbxref=GeneID:4806406;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=SSA_1500
NC_009009.1	RefSeq	CDS	1504481	1505011	.	-	0	ID=cds1423;Parent=gene1471;Dbxref=Genbank:YP_001035444.1,GeneID:4806406;Name=YP_001035444.1;Note=IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=YP_001035444.1;transl_table=11
NC_009009.1	RefSeq	gene	1505185	1505862	.	-	.	ID=gene1472;Dbxref=GeneID:4806017;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=SSA_1501
NC_009009.1	RefSeq	CDS	1505185	1505862	.	-	0	ID=cds1424;Parent=gene1472;Dbxref=Genbank:YP_001035445.1,GeneID:4806017;Name=YP_001035445.1;Note=Catalyzes the formation of (d)CDP from ATP and (d)CMP;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=YP_001035445.1;transl_table=11
NC_009009.1	RefSeq	gene	1505872	1506309	.	-	.	ID=gene1473;Dbxref=GeneID:4806822;Name=SSA_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1502
NC_009009.1	RefSeq	CDS	1505872	1506309	.	-	0	ID=cds1425;Parent=gene1473;Dbxref=Genbank:YP_001035446.1,GeneID:4806822;Name=YP_001035446.1;Note=GC: 46.35%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.766. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035446.1;transl_table=11
NC_009009.1	RefSeq	gene	1506349	1506552	.	+	.	ID=gene1474;Dbxref=GeneID:4805780;Name=fer;gbkey=Gene;gene=fer;gene_biotype=protein_coding;locus_tag=SSA_1503
NC_009009.1	RefSeq	CDS	1506349	1506552	.	+	0	ID=cds1426;Parent=gene1474;Dbxref=Genbank:YP_001035447.1,GeneID:4805780;Name=YP_001035447.1;Note=GC: 46.57%25%3B Codon Adaptation Index (CAI): 0.733.;gbkey=CDS;gene=fer;product=ferredoxin;protein_id=YP_001035447.1;transl_table=11
NC_009009.1	RefSeq	gene	1506549	1507037	.	-	.	ID=gene1475;Dbxref=GeneID:4805919;Name=SSA_1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1504
NC_009009.1	RefSeq	CDS	1506549	1507037	.	-	0	ID=cds1427;Parent=gene1475;Dbxref=Genbank:YP_001035448.1,GeneID:4805919;Name=YP_001035448.1;Note=GC: 38.65%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035448.1;transl_table=11
NC_009009.1	RefSeq	gene	1507117	1509645	.	-	.	ID=gene1476;Dbxref=GeneID:4806073;Name=SSA_1505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1505
NC_009009.1	RefSeq	CDS	1507117	1509645	.	-	0	ID=cds1428;Parent=gene1476;Dbxref=Genbank:YP_001035449.1,GeneID:4806073;Name=YP_001035449.1;Note=GC: 39.42%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.778. Partially similar to phosphoglycerol transferase-like proteins%2C alkaline phosphatase superfamily. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035449.1;transl_table=11
NC_009009.1	RefSeq	gene	1509642	1511312	.	-	.	ID=gene1477;Dbxref=GeneID:4806645;Name=rgpFc;gbkey=Gene;gene=rgpFc;gene_biotype=protein_coding;locus_tag=SSA_1506
NC_009009.1	RefSeq	CDS	1509642	1511312	.	-	0	ID=cds1429;Parent=gene1477;Dbxref=Genbank:YP_001035450.1,GeneID:4806645;Name=YP_001035450.1;Note=GC: 41.77%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;gene=rgpFc;product=lipopolysaccharide biosynthesis protein;protein_id=YP_001035450.1;transl_table=11
NC_009009.1	RefSeq	gene	1511329	1512534	.	-	.	ID=gene1478;Dbxref=GeneID:4806244;Name=rgpD;gbkey=Gene;gene=rgpD;gene_biotype=protein_coding;locus_tag=SSA_1507
NC_009009.1	RefSeq	CDS	1511329	1512534	.	-	0	ID=cds1430;Parent=gene1478;Dbxref=Genbank:YP_001035451.1,GeneID:4806244;Name=YP_001035451.1;Note=GC: 42.87%25%3B Transporter classification TC:3.A.1.103.1. Codon Adaptation Index (CAI): 0.809. Curator(s): J. Alves;gbkey=CDS;gene=rgpD;product=sugar ABC transporter ATPase;protein_id=YP_001035451.1;transl_table=11
NC_009009.1	RefSeq	gene	1512534	1513340	.	-	.	ID=gene1479;Dbxref=GeneID:4806224;Name=rgpC;gbkey=Gene;gene=rgpC;gene_biotype=protein_coding;locus_tag=SSA_1508
NC_009009.1	RefSeq	CDS	1512534	1513340	.	-	0	ID=cds1431;Parent=gene1479;Dbxref=Genbank:YP_001035452.1,GeneID:4806224;Name=YP_001035452.1;Note=GC: 40.4%25%3B Transporter classification TC:3.A.1.103.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.774. Curator(s): J. Alves;gbkey=CDS;gene=rgpC;product=sugar ABC transporter permease;protein_id=YP_001035452.1;transl_table=11
NC_009009.1	RefSeq	gene	1513346	1514281	.	-	.	ID=gene1480;Dbxref=GeneID:4808029;Name=rgpB;gbkey=Gene;gene=rgpB;gene_biotype=protein_coding;locus_tag=SSA_1509
NC_009009.1	RefSeq	CDS	1513346	1514281	.	-	0	ID=cds1432;Parent=gene1480;Dbxref=Genbank:YP_001035453.1,GeneID:4808029;Name=YP_001035453.1;Note=GC: 45.19%25%3B Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;gene=rgpB;product=polysaccharide biosynthesis protein/ rhamnosyltransferase;protein_id=YP_001035453.1;transl_table=11
NC_009009.1	RefSeq	gene	1514278	1515426	.	-	.	ID=gene1481;Dbxref=GeneID:4806382;Name=rgpA;gbkey=Gene;gene=rgpA;gene_biotype=protein_coding;locus_tag=SSA_1510
NC_009009.1	RefSeq	CDS	1514278	1515426	.	-	0	ID=cds1433;Parent=gene1481;Dbxref=Genbank:YP_001035454.1,GeneID:4806382;Name=YP_001035454.1;Note=GC: 43.69%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;gene=rgpA;product=rhamnosyltransferase;protein_id=YP_001035454.1;transl_table=11
NC_009009.1	RefSeq	gene	1515540	1516787	.	-	.	ID=gene1482;Dbxref=GeneID:4806695;Name=SSA_1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1511
NC_009009.1	RefSeq	CDS	1515540	1516787	.	-	0	ID=cds1434;Parent=gene1482;Dbxref=Genbank:YP_001035455.1,GeneID:4806695;Name=YP_001035455.1;Note=GC: 42.63%25%3B Codon Adaptation Index (CAI): 0.748. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=glycosyltransferase;protein_id=YP_001035455.1;transl_table=11
NC_009009.1	RefSeq	gene	1516791	1518026	.	-	.	ID=gene1483;Dbxref=GeneID:4807743;Name=SSA_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1512
NC_009009.1	RefSeq	CDS	1516791	1518026	.	-	0	ID=cds1435;Parent=gene1483;Dbxref=Genbank:YP_001035456.1,GeneID:4807743;Name=YP_001035456.1;Note=GC: 42.48%25%3B Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.76.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035456.1;transl_table=11
NC_009009.1	RefSeq	gene	1518085	1521066	.	-	.	ID=gene1484;Dbxref=GeneID:4807843;Name=rgpF;gbkey=Gene;gene=rgpF;gene_biotype=protein_coding;locus_tag=SSA_1513
NC_009009.1	RefSeq	CDS	1518085	1521066	.	-	0	ID=cds1436;Parent=gene1484;Dbxref=Genbank:YP_001035457.1,GeneID:4807843;Name=YP_001035457.1;Note=GC: 41.62%25%3B Transporter classification TC:9.B.32.1.3. Codon Adaptation Index (CAI): 0.781. Curator(s): T. Kitten;gbkey=CDS;gene=rgpF;product=glycosyltransferase;protein_id=YP_001035457.1;transl_table=11
NC_009009.1	RefSeq	gene	1521091	1521870	.	-	.	ID=gene1485;Dbxref=GeneID:4808051;Name=SSA_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1514
NC_009009.1	RefSeq	CDS	1521091	1521870	.	-	0	ID=cds1437;Parent=gene1485;Dbxref=Genbank:YP_001035458.1,GeneID:4808051;Name=YP_001035458.1;Note=GC: 40.9%25%3B Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;product=cell-wall biogenesis glycosyltransferase;protein_id=YP_001035458.1;transl_table=11
NC_009009.1	RefSeq	gene	1521860	1522219	.	-	.	ID=gene1486;Dbxref=GeneID:4807599;Name=SSA_1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1515
NC_009009.1	RefSeq	CDS	1521860	1522219	.	-	0	ID=cds1438;Parent=gene1486;Dbxref=Genbank:YP_001035459.1,GeneID:4807599;Name=YP_001035459.1;Note=GC: 33.89%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035459.1;transl_table=11
NC_009009.1	RefSeq	gene	1522219	1522923	.	-	.	ID=gene1487;Dbxref=GeneID:4807657;Name=SSA_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1516
NC_009009.1	RefSeq	CDS	1522219	1522923	.	-	0	ID=cds1439;Parent=gene1487;Dbxref=Genbank:YP_001035460.1,GeneID:4807657;Name=YP_001035460.1;Note=GC: 40%25%3B Transporter classification TC:9.B.32.1.3. Codon Adaptation Index (CAI): 0.818.;gbkey=CDS;product=cell-wall biogenesis glycosyltransferase;protein_id=YP_001035460.1;transl_table=11
NC_009009.1	RefSeq	gene	1522932	1523903	.	-	.	ID=gene1488;Dbxref=GeneID:4807781;Name=cpsIaJ;gbkey=Gene;gene=cpsIaJ;gene_biotype=protein_coding;locus_tag=SSA_1517
NC_009009.1	RefSeq	CDS	1522932	1523903	.	-	0	ID=cds1440;Parent=gene1488;Dbxref=Genbank:YP_001035461.1,GeneID:4807781;Name=YP_001035461.1;Note=GC: 31.28%25%3B Transporter classification TC:9.B.32.1.3. Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;gene=cpsIaJ;product=cell-wall biogenesis glycosyltransferase;protein_id=YP_001035461.1;transl_table=11
NC_009009.1	RefSeq	gene	1523930	1524877	.	-	.	ID=gene1489;Dbxref=GeneID:4807970;Name=rgpE;gbkey=Gene;gene=rgpE;gene_biotype=protein_coding;locus_tag=SSA_1518
NC_009009.1	RefSeq	CDS	1523930	1524877	.	-	0	ID=cds1441;Parent=gene1489;Dbxref=Genbank:YP_001035462.1,GeneID:4807970;Name=YP_001035462.1;Note=GC: 29.96%25%3B Transporter classification TC:9.B.32.1.3. Codon Adaptation Index (CAI): 0.757.;gbkey=CDS;gene=rgpE;product=glycosyl transferase family protein;protein_id=YP_001035462.1;transl_table=11
NC_009009.1	RefSeq	gene	1524885	1526159	.	-	.	ID=gene1490;Dbxref=GeneID:4805860;Name=SSA_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1519
NC_009009.1	RefSeq	CDS	1524885	1526159	.	-	0	ID=cds1442;Parent=gene1490;Dbxref=Genbank:YP_001035463.1,GeneID:4805860;Name=YP_001035463.1;Note=GC: 28.55%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.753. SignalP prediction: Yes (prob. 0.989).;gbkey=CDS;product=polysaccharide/teichoic acid transporter;protein_id=YP_001035463.1;transl_table=11
NC_009009.1	RefSeq	gene	1526475	1527671	.	-	.	ID=gene1491;Dbxref=GeneID:4807306;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SSA_1520
NC_009009.1	RefSeq	CDS	1526475	1527671	.	-	0	ID=cds1443;Parent=gene1491;Dbxref=Genbank:YP_001035464.1,GeneID:4807306;Name=YP_001035464.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=YP_001035464.1;transl_table=11
NC_009009.1	RefSeq	gene	1527927	1530773	.	-	.	ID=gene1492;Dbxref=GeneID:4805880;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=SSA_1521
NC_009009.1	RefSeq	CDS	1527927	1530773	.	-	0	ID=cds1444;Parent=gene1492;Dbxref=Genbank:YP_001035465.1,GeneID:4805880;Name=YP_001035465.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=YP_001035465.1;transl_table=11
NC_009009.1	RefSeq	gene	1530820	1532052	.	-	.	ID=gene1493;Dbxref=GeneID:4806751;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=SSA_1522
NC_009009.1	RefSeq	CDS	1530820	1532052	.	-	0	ID=cds1445;Parent=gene1493;Dbxref=Genbank:YP_001035466.1,GeneID:4806751;Name=YP_001035466.1;Note=GC: 44.2%25%3B Transporter classification TC:9.B.3.1.3. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.729. SignalP prediction: Yes (prob. 0.95).;gbkey=CDS;gene=ftsW;product=cell division protein FtsW;protein_id=YP_001035466.1;transl_table=11
NC_009009.1	RefSeq	gene	1532207	1532680	.	+	.	ID=gene1494;Dbxref=GeneID:4806100;Name=basA;gbkey=Gene;gene=basA;gene_biotype=protein_coding;locus_tag=SSA_1523
NC_009009.1	RefSeq	CDS	1532207	1532680	.	+	0	ID=cds1446;Parent=gene1494;Dbxref=Genbank:YP_001035467.1,GeneID:4806100;Name=YP_001035467.1;Note=GC: 43.46%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): J. Alves;gbkey=CDS;gene=basA;product=glutathione peroxidase;protein_id=YP_001035467.1;transl_table=11
NC_009009.1	RefSeq	gene	1532886	1533743	.	+	.	ID=gene1495;Dbxref=GeneID:4805939;Name=SSA_1525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1525
NC_009009.1	RefSeq	CDS	1532886	1533743	.	+	0	ID=cds1447;Parent=gene1495;Dbxref=Genbank:YP_001035468.1,GeneID:4805939;Name=YP_001035468.1;Note=GC: 39.98%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.785. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).;gbkey=CDS;product=1%2C4-beta-N-acetylmuramidase;protein_id=YP_001035468.1;transl_table=11
NC_009009.1	RefSeq	gene	1533862	1534734	.	+	.	ID=gene1496;Dbxref=GeneID:4806283;Name=SSA_1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1526
NC_009009.1	RefSeq	CDS	1533862	1534734	.	+	0	ID=cds1448;Parent=gene1496;Dbxref=Genbank:YP_001035469.1,GeneID:4806283;Name=YP_001035469.1;Note=GC: 42.38%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.757. SignalP prediction: Yes (prob. 0.817).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035469.1;transl_table=11
NC_009009.1	RefSeq	gene	1534727	1535212	.	+	.	ID=gene1497;Dbxref=GeneID:4805988;Name=ebsC;gbkey=Gene;gene=ebsC;gene_biotype=protein_coding;locus_tag=SSA_1527
NC_009009.1	RefSeq	CDS	1534727	1535212	.	+	0	ID=cds1449;Parent=gene1497;Dbxref=Genbank:YP_001035470.1,GeneID:4805988;Name=YP_001035470.1;Note=GC: 43.42%25%3B Codon Adaptation Index (CAI): 0.797.;gbkey=CDS;gene=ebsC;product=hypothetical protein;protein_id=YP_001035470.1;transl_table=11
NC_009009.1	RefSeq	gene	1535275	1535910	.	+	.	ID=gene1498;Dbxref=GeneID:4805914;Name=gpm;gbkey=Gene;gene=gpm;gene_biotype=protein_coding;locus_tag=SSA_1528
NC_009009.1	RefSeq	CDS	1535275	1535910	.	+	0	ID=cds1450;Parent=gene1498;Dbxref=Genbank:YP_001035471.1,GeneID:4805914;Name=YP_001035471.1;Note=GC: 45.91%25%3B Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;gene=gpm;product=phosphoglycerate mutase;protein_id=YP_001035471.1;transl_table=11
NC_009009.1	RefSeq	gene	1536011	1537501	.	+	.	ID=gene1499;Dbxref=GeneID:4806331;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SSA_1529
NC_009009.1	RefSeq	CDS	1536011	1537501	.	+	0	ID=cds1451;Parent=gene1499;Dbxref=Genbank:YP_001035472.1,GeneID:4806331;Name=YP_001035472.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysyl-tRNA synthetase;protein_id=YP_001035472.1;transl_table=11
NC_009009.1	RefSeq	gene	1537600	1538868	.	-	.	ID=gene1500;Dbxref=GeneID:4806240;Name=SSA_1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1530
NC_009009.1	RefSeq	CDS	1537600	1538868	.	-	0	ID=cds1452;Parent=gene1500;Dbxref=Genbank:YP_001035473.1,GeneID:4806240;Name=YP_001035473.1;Note=GC: 44.6%25%3B Transporter classification TC:3.A.1.122.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.773. SignalP prediction: Yes (prob. 0.994)%3B Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_001035473.1;transl_table=11
NC_009009.1	RefSeq	gene	1538868	1539566	.	-	.	ID=gene1501;Dbxref=GeneID:4806021;Name=salX;gbkey=Gene;gene=salX;gene_biotype=protein_coding;locus_tag=SSA_1531
NC_009009.1	RefSeq	CDS	1538868	1539566	.	-	0	ID=cds1453;Parent=gene1501;Dbxref=Genbank:YP_001035474.1,GeneID:4806021;Name=YP_001035474.1;Note=GC: 47.21%25%3B Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.794. Curator(s): J. Alves;gbkey=CDS;gene=salX;product=peptide ABC transporter ATPase;protein_id=YP_001035474.1;transl_table=11
NC_009009.1	RefSeq	gene	1539550	1540713	.	-	.	ID=gene1502;Dbxref=GeneID:4807964;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=SSA_1532
NC_009009.1	RefSeq	CDS	1539550	1540713	.	-	0	ID=cds1454;Parent=gene1502;Dbxref=Genbank:YP_001035475.1,GeneID:4807964;Name=YP_001035475.1;Note=GC: 44.76%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.8. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): J. Alves;gbkey=CDS;gene=acrA;product=membrane-fusion protein / periplasmic component of efflux system;protein_id=YP_001035475.1;transl_table=11
NC_009009.1	RefSeq	gene	1540731	1542272	.	+	.	ID=gene1503;Dbxref=GeneID:4807491;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=SSA_1533
NC_009009.1	RefSeq	CDS	1540731	1542272	.	+	0	ID=cds1455;Parent=gene1503;Dbxref=Genbank:YP_001035476.1,GeneID:4807491;Name=YP_001035476.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;gene=gor;product=glutathione reductase;protein_id=YP_001035476.1;transl_table=11
NC_009009.1	RefSeq	gene	1542547	1543278	.	-	.	ID=gene1504;Dbxref=GeneID:4807278;Name=SSA_1535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1535
NC_009009.1	RefSeq	CDS	1542547	1543278	.	-	0	ID=cds1456;Parent=gene1504;Dbxref=Genbank:YP_001035477.1,GeneID:4807278;Name=YP_001035477.1;Note=GC: 45.49%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035477.1;transl_table=11
NC_009009.1	RefSeq	gene	1543749	1544294	.	+	.	ID=gene1505;Dbxref=GeneID:4807487;Name=bioY;gbkey=Gene;gene=bioY;gene_biotype=protein_coding;locus_tag=SSA_1536
NC_009009.1	RefSeq	CDS	1543749	1544294	.	+	0	ID=cds1457;Parent=gene1505;Dbxref=Genbank:YP_001035478.1,GeneID:4807487;Name=YP_001035478.1;Note=GC: 45.24%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.76. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=bioY;product=biotin synthase;protein_id=YP_001035478.1;transl_table=11
NC_009009.1	RefSeq	gene	1544319	1544531	.	-	.	ID=gene1506;Dbxref=GeneID:4807794;Name=SSA_1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1537
NC_009009.1	RefSeq	CDS	1544319	1544531	.	-	0	ID=cds1458;Parent=gene1506;Dbxref=Genbank:YP_001035479.1,GeneID:4807794;Name=YP_001035479.1;Note=GC: 43.19%25%3B Codon Adaptation Index (CAI): 0.815.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035479.1;transl_table=11
NC_009009.1	RefSeq	gene	1544622	1544978	.	+	.	ID=gene1507;Dbxref=GeneID:4807726;Name=SSA_1538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1538
NC_009009.1	RefSeq	CDS	1544622	1544978	.	+	0	ID=cds1459;Parent=gene1507;Dbxref=Genbank:YP_001035480.1,GeneID:4807726;Name=YP_001035480.1;Note=GC: 41.74%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035480.1;transl_table=11
NC_009009.1	RefSeq	gene	1545005	1545358	.	-	.	ID=gene1508;Dbxref=GeneID:4807751;Name=SSA_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1540
NC_009009.1	RefSeq	CDS	1545005	1545358	.	-	0	ID=cds1460;Parent=gene1508;Dbxref=Genbank:YP_001035481.1,GeneID:4807751;Name=YP_001035481.1;Note=GC: 41.81%25%3B Codon Adaptation Index (CAI): 0.814.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035481.1;transl_table=11
NC_009009.1	RefSeq	gene	1545401	1546690	.	-	.	ID=gene1509;Dbxref=GeneID:4807789;Name=SSA_1541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1541
NC_009009.1	RefSeq	CDS	1545401	1546690	.	-	0	ID=cds1461;Parent=gene1509;Dbxref=Genbank:YP_001035482.1,GeneID:4807789;Name=YP_001035482.1;Note=GC: 47.44%25%3B Codon Adaptation Index (CAI): 0.777. Curator(s): J. Alves;gbkey=CDS;product=U32 family peptidase;protein_id=YP_001035482.1;transl_table=11
NC_009009.1	RefSeq	gene	1546915	1547886	.	-	.	ID=gene1510;Dbxref=GeneID:4807465;Name=SSA_1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1542
NC_009009.1	RefSeq	CDS	1546915	1547886	.	-	0	ID=cds1462;Parent=gene1510;Dbxref=Genbank:YP_001035483.1,GeneID:4807465;Name=YP_001035483.1;Note=GC: 40.84%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves;gbkey=CDS;product=U32 family peptidase;protein_id=YP_001035483.1;transl_table=11
NC_009009.1	RefSeq	gene	1547975	1548277	.	+	.	ID=gene1511;Dbxref=GeneID:4807671;Name=SSA_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1543
NC_009009.1	RefSeq	CDS	1547975	1548277	.	+	0	ID=cds1463;Parent=gene1511;Dbxref=Genbank:YP_001035484.1,GeneID:4807671;Name=YP_001035484.1;Note=GC: 34.65%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035484.1;transl_table=11
NC_009009.1	RefSeq	gene	1548404	1548886	.	-	.	ID=gene1512;Dbxref=GeneID:4807428;Name=SSA_1544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1544
NC_009009.1	RefSeq	CDS	1548404	1548886	.	-	0	ID=cds1464;Parent=gene1512;Dbxref=Genbank:YP_001035485.1,GeneID:4807428;Name=YP_001035485.1;Note=GC: 39.54%25%3B Codon Adaptation Index (CAI): 0.825. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.794). Similar to Gas vesicle protein. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035485.1;transl_table=11
NC_009009.1	RefSeq	gene	1548902	1549300	.	-	.	ID=gene1513;Dbxref=GeneID:4807827;Name=SSA_1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1545
NC_009009.1	RefSeq	CDS	1548902	1549300	.	-	0	ID=cds1465;Parent=gene1513;Dbxref=Genbank:YP_001035486.1,GeneID:4807827;Name=YP_001035486.1;Note=GC: 39.6%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035486.1;transl_table=11
NC_009009.1	RefSeq	gene	1549357	1550142	.	-	.	ID=gene1514;Dbxref=GeneID:4807439;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=SSA_1546
NC_009009.1	RefSeq	CDS	1549357	1550142	.	-	0	ID=cds1466;Parent=gene1514;Dbxref=Genbank:YP_001035487.1,GeneID:4807439;Name=YP_001035487.1;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=YP_001035487.1;transl_table=11
NC_009009.1	RefSeq	gene	1550135	1551070	.	-	.	ID=gene1515;Dbxref=GeneID:4807864;Name=ptsK;gbkey=Gene;gene=ptsK;gene_biotype=protein_coding;locus_tag=SSA_1547
NC_009009.1	RefSeq	CDS	1550135	1551070	.	-	0	ID=cds1467;Parent=gene1515;Dbxref=Genbank:YP_001035488.1,GeneID:4807864;Name=YP_001035488.1;Note=catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system;gbkey=CDS;gene=ptsK;product=HPr kinase/phosphorylase;protein_id=YP_001035488.1;transl_table=11
NC_009009.1	RefSeq	gene	1551209	1551700	.	-	.	ID=gene1516;Dbxref=GeneID:4807661;Name=SSA_1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1548
NC_009009.1	RefSeq	CDS	1551209	1551700	.	-	0	ID=cds1468;Parent=gene1516;Dbxref=Genbank:YP_001035489.1,GeneID:4807661;Name=YP_001035489.1;Note=GC: 44.92%25%3B Codon Adaptation Index (CAI): 0.816.;gbkey=CDS;product=NTP pyrophosphohydrolases including oxidative damage repair enzymes;protein_id=YP_001035489.1;transl_table=11
NC_009009.1	RefSeq	gene	1551906	1552202	.	-	.	ID=gene1517;Dbxref=GeneID:4806290;Name=SSA_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1549
NC_009009.1	RefSeq	CDS	1551906	1552202	.	-	0	ID=cds1469;Parent=gene1517;Dbxref=Genbank:YP_001035490.1,GeneID:4806290;Name=YP_001035490.1;Note=GC: 40.4%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.809.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035490.1;transl_table=11
NC_009009.1	RefSeq	gene	1552318	1552755	.	-	.	ID=gene1518;Dbxref=GeneID:4807034;Name=SSA_1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1550
NC_009009.1	RefSeq	CDS	1552318	1552755	.	-	0	ID=cds1470;Parent=gene1518;Dbxref=Genbank:YP_001035491.1,GeneID:4807034;Name=YP_001035491.1;Note=GC: 45.21%25%3B Codon Adaptation Index (CAI): 0.793.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035491.1;transl_table=11
NC_009009.1	RefSeq	gene	1552742	1554874	.	-	.	ID=gene1519;Dbxref=GeneID:4807658;Name=tex;gbkey=Gene;gene=tex;gene_biotype=protein_coding;locus_tag=SSA_1551
NC_009009.1	RefSeq	CDS	1552742	1554874	.	-	0	ID=cds1471;Parent=gene1519;Dbxref=Genbank:YP_001035492.1,GeneID:4807658;Name=YP_001035492.1;Note=GC: 46.93%25%3B Codon Adaptation Index (CAI): 0.801. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=tex;product=transcriptional accessory ribonuclease (YqgFc%2C S1);protein_id=YP_001035492.1;transl_table=11
NC_009009.1	RefSeq	gene	1555053	1555190	.	+	.	ID=gene1520;Dbxref=GeneID:4806338;Name=SSA_1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1552
NC_009009.1	RefSeq	CDS	1555053	1555190	.	+	0	ID=cds1472;Parent=gene1520;Dbxref=Genbank:YP_001035493.1,GeneID:4806338;Name=YP_001035493.1;Note=GC: 37.68%25%3B Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035493.1;transl_table=11
NC_009009.1	RefSeq	gene	1555187	1556092	.	+	.	ID=gene1521;Dbxref=GeneID:4807469;Name=SSA_1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1553
NC_009009.1	RefSeq	CDS	1555187	1556092	.	+	0	ID=cds1473;Parent=gene1521;Dbxref=Genbank:YP_001035494.1,GeneID:4807469;Name=YP_001035494.1;Note=GC: 45.92%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.743. Curator(s): J. Alves;gbkey=CDS;product=permease;protein_id=YP_001035494.1;transl_table=11
NC_009009.1	RefSeq	gene	1556089	1556907	.	+	.	ID=gene1522;Dbxref=GeneID:4808025;Name=SSA_1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1554
NC_009009.1	RefSeq	CDS	1556089	1556907	.	+	0	ID=cds1474;Parent=gene1522;Dbxref=Genbank:YP_001035495.1,GeneID:4808025;Name=YP_001035495.1;Note=GC: 43.47%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035495.1;transl_table=11
NC_009009.1	RefSeq	gene	1557082	1558542	.	+	.	ID=gene1523;Dbxref=GeneID:4807780;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=SSA_1555
NC_009009.1	RefSeq	CDS	1557082	1558542	.	+	0	ID=cds1475;Parent=gene1523;Dbxref=Genbank:YP_001035496.1,GeneID:4807780;Name=YP_001035496.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;gene=gdh;product=glucose-6-phosphate 1-dehydrogenase;protein_id=YP_001035496.1;transl_table=11
NC_009009.1	RefSeq	gene	1558592	1560130	.	-	.	ID=gene1524;Dbxref=GeneID:4807946;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=SSA_1557
NC_009009.1	RefSeq	CDS	1558592	1560130	.	-	0	ID=cds1476;Parent=gene1524;Dbxref=Genbank:YP_001035497.1,GeneID:4807946;Name=YP_001035497.1;Note=GC: 45.22%25%3B Transporter classification TC:3.A.5.1.1. Codon Adaptation Index (CAI): 0.795. Curator(s): J. Alves;gbkey=CDS;gene=ftsY;product=SRPR%2C signal recognition particle-docking protein;protein_id=YP_001035497.1;transl_table=11
NC_009009.1	RefSeq	gene	1560134	1560952	.	-	.	ID=gene1525;Dbxref=GeneID:4808030;Name=SSA_1558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1558
NC_009009.1	RefSeq	CDS	1560134	1560952	.	-	0	ID=cds1477;Parent=gene1525;Dbxref=Genbank:YP_001035498.1,GeneID:4808030;Name=YP_001035498.1;Note=GC: 44.44%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): J. Alves;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=YP_001035498.1;transl_table=11
NC_009009.1	RefSeq	gene	1560952	1561746	.	-	.	ID=gene1526;Dbxref=GeneID:4806143;Name=SSA_1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1559
NC_009009.1	RefSeq	CDS	1560952	1561746	.	-	0	ID=cds1478;Parent=gene1526;Dbxref=Genbank:YP_001035499.1,GeneID:4806143;Name=YP_001035499.1;Note=GC: 44.78%25%3B Codon Adaptation Index (CAI): 0.793.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035499.1;transl_table=11
NC_009009.1	RefSeq	gene	1561748	1565284	.	-	.	ID=gene1527;Dbxref=GeneID:4807640;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=SSA_1560
NC_009009.1	RefSeq	CDS	1561748	1565284	.	-	0	ID=cds1479;Parent=gene1527;Dbxref=Genbank:YP_001035500.1,GeneID:4807640;Name=YP_001035500.1;Note=GC: 47.75%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): J. Alves;gbkey=CDS;gene=smc;product=structural maintenance of chromosome protein (chromosome segregation ATPase);protein_id=YP_001035500.1;transl_table=11
NC_009009.1	RefSeq	gene	1565275	1565973	.	-	.	ID=gene1528;Dbxref=GeneID:4805927;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SSA_1561
NC_009009.1	RefSeq	CDS	1565275	1565973	.	-	0	ID=cds1480;Parent=gene1528;Dbxref=Genbank:YP_001035501.1,GeneID:4805927;Name=YP_001035501.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=YP_001035501.1;transl_table=11
NC_009009.1	RefSeq	gene	1566095	1566454	.	-	.	ID=gene1529;Dbxref=GeneID:4805874;Name=SSA_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1562
NC_009009.1	RefSeq	CDS	1566095	1566454	.	-	0	ID=cds1481;Parent=gene1529;Dbxref=Genbank:YP_001035502.1,GeneID:4805874;Name=YP_001035502.1;Note=GC: 41.39%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.758. SignalP prediction: Yes (prob. 0.906).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035502.1;transl_table=11
NC_009009.1	RefSeq	gene	1566546	1567346	.	-	.	ID=gene1530;Dbxref=GeneID:4806266;Name=vicX;gbkey=Gene;gene=vicX;gene_biotype=protein_coding;locus_tag=SSA_1563
NC_009009.1	RefSeq	CDS	1566546	1567346	.	-	0	ID=cds1482;Parent=gene1530;Dbxref=Genbank:YP_001035503.1,GeneID:4806266;Name=YP_001035503.1;Note=GC: 46.44%25%3B Codon Adaptation Index (CAI): 0.818.;gbkey=CDS;gene=vicX;product=beta-lactamase superfamily hydrolase;protein_id=YP_001035503.1;transl_table=11
NC_009009.1	RefSeq	gene	1567356	1568705	.	-	.	ID=gene1531;Dbxref=GeneID:4806426;Name=SSA_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1564
NC_009009.1	RefSeq	CDS	1567356	1568705	.	-	0	ID=cds1483;Parent=gene1531;Dbxref=Genbank:YP_001035504.1,GeneID:4806426;Name=YP_001035504.1;Note=GC: 44.96%25%3B Transporter classification TC:2.A.21.9.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=histidine kinase;protein_id=YP_001035504.1;transl_table=11
NC_009009.1	RefSeq	gene	1568698	1569399	.	-	.	ID=gene1532;Dbxref=GeneID:4807118;Name=SSA_1565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1565
NC_009009.1	RefSeq	CDS	1568698	1569399	.	-	0	ID=cds1484;Parent=gene1532;Dbxref=Genbank:YP_001035505.1,GeneID:4807118;Name=YP_001035505.1;Note=GC: 45.58%25%3B Codon Adaptation Index (CAI): 0.814. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035505.1;transl_table=11
NC_009009.1	RefSeq	gene	1569739	1570500	.	+	.	ID=gene1533;Dbxref=GeneID:4806839;Name=SSA_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1566
NC_009009.1	RefSeq	CDS	1569739	1570500	.	+	0	ID=cds1485;Parent=gene1533;Dbxref=Genbank:YP_001035506.1,GeneID:4806839;Name=YP_001035506.1;Note=GC: 43.31%25%3B Transporter classification TC:3.A.1.3.9. Codon Adaptation Index (CAI): 0.785. Curator(s): J. Alves;gbkey=CDS;product=polar amino acid ABC transporter ATP-binding protein;protein_id=YP_001035506.1;transl_table=11
NC_009009.1	RefSeq	gene	1570515	1571327	.	+	.	ID=gene1534;Dbxref=GeneID:4807042;Name=SSA_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1567
NC_009009.1	RefSeq	CDS	1570515	1571327	.	+	0	ID=cds1486;Parent=gene1534;Dbxref=Genbank:YP_001035507.1,GeneID:4807042;Name=YP_001035507.1;Note=GC: 40.71%25%3B Transporter classification TC:3.A.1.3.10. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=polar amino acid ABC transporter amino acid-binding protein;protein_id=YP_001035507.1;transl_table=11
NC_009009.1	RefSeq	gene	1571340	1572020	.	+	.	ID=gene1535;Dbxref=GeneID:4807103;Name=SSA_1568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1568
NC_009009.1	RefSeq	CDS	1571340	1572020	.	+	0	ID=cds1487;Parent=gene1535;Dbxref=Genbank:YP_001035508.1,GeneID:4807103;Name=YP_001035508.1;Note=GC: 45.81%25%3B Transporter classification TC:3.A.1.3.12. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.742. Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter permease;protein_id=YP_001035508.1;transl_table=11
NC_009009.1	RefSeq	gene	1572031	1572690	.	+	.	ID=gene1536;Dbxref=GeneID:4807176;Name=SSA_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1569
NC_009009.1	RefSeq	CDS	1572031	1572690	.	+	0	ID=cds1488;Parent=gene1536;Dbxref=Genbank:YP_001035509.1,GeneID:4807176;Name=YP_001035509.1;Note=GC: 42.58%25%3B Transporter classification TC:3.A.1.3.12. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter permease;protein_id=YP_001035509.1;transl_table=11
NC_009009.1	RefSeq	gene	1572799	1573197	.	+	.	ID=gene1537;Dbxref=GeneID:4806992;Name=SSA_1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1570
NC_009009.1	RefSeq	CDS	1572799	1573197	.	+	0	ID=cds1489;Parent=gene1537;Dbxref=Genbank:YP_001035510.1,GeneID:4806992;Name=YP_001035510.1;Note=GC: 38.85%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.968).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035510.1;transl_table=11
NC_009009.1	RefSeq	gene	1573301	1575244	.	-	.	ID=gene1538;Dbxref=GeneID:4807152;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SSA_1571
NC_009009.1	RefSeq	CDS	1573301	1575244	.	-	0	ID=cds1490;Parent=gene1538;Dbxref=Genbank:YP_001035511.1,GeneID:4807152;Name=YP_001035511.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=YP_001035511.1;transl_table=11
NC_009009.1	RefSeq	gene	1575237	1575998	.	-	.	ID=gene1539;Dbxref=GeneID:4806983;Name=SSA_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1572
NC_009009.1	RefSeq	CDS	1575237	1575998	.	-	0	ID=cds1491;Parent=gene1539;Dbxref=Genbank:YP_001035512.1,GeneID:4806983;Name=YP_001035512.1;Note=GC: 41.08%25%3B Codon Adaptation Index (CAI): 0.754.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035512.1;transl_table=11
NC_009009.1	RefSeq	gene	1576144	1576626	.	-	.	ID=gene1540;Dbxref=GeneID:4806917;Name=SSA_1573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1573
NC_009009.1	RefSeq	CDS	1576144	1576626	.	-	0	ID=cds1492;Parent=gene1540;Dbxref=Genbank:YP_001035513.1,GeneID:4806917;Name=YP_001035513.1;Note=GC: 36.85%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.77.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035513.1;transl_table=11
NC_009009.1	RefSeq	gene	1576698	1578020	.	-	.	ID=gene1541;Dbxref=GeneID:4807038;Name=SSA_1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1574
NC_009009.1	RefSeq	CDS	1576698	1578020	.	-	0	ID=cds1493;Parent=gene1541;Dbxref=Genbank:YP_001035514.1,GeneID:4807038;Name=YP_001035514.1;Note=GC: 44.37%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_001035514.1;transl_table=11
NC_009009.1	RefSeq	gene	1578022	1579200	.	-	.	ID=gene1542;Dbxref=GeneID:4806432;Name=cpoA;gbkey=Gene;gene=cpoA;gene_biotype=protein_coding;locus_tag=SSA_1575
NC_009009.1	RefSeq	CDS	1578022	1579200	.	-	0	ID=cds1494;Parent=gene1542;Dbxref=Genbank:YP_001035515.1,GeneID:4806432;Name=YP_001035515.1;Note=GC: 44.95%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;gene=cpoA;product=glycosyl transferase family protein;protein_id=YP_001035515.1;transl_table=11
NC_009009.1	RefSeq	gene	1579267	1580271	.	-	.	ID=gene1543;Dbxref=GeneID:4806202;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=SSA_1576
NC_009009.1	RefSeq	CDS	1579267	1580271	.	-	0	ID=cds1495;Parent=gene1543;Dbxref=Genbank:YP_001035516.1,GeneID:4806202;Name=YP_001035516.1;Note=GC: 43.08%25%3B Codon Adaptation Index (CAI): 0.795. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=ccpA;product=catabolite control protein A;protein_id=YP_001035516.1;transl_table=11
NC_009009.1	RefSeq	gene	1580434	1581516	.	+	.	ID=gene1544;Dbxref=GeneID:4806684;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=SSA_1577
NC_009009.1	RefSeq	CDS	1580434	1581516	.	+	0	ID=cds1496;Parent=gene1544;Dbxref=Genbank:YP_001035517.1,GeneID:4806684;Name=YP_001035517.1;Note=GC: 46.17%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=YP_001035517.1;transl_table=11
NC_009009.1	RefSeq	gene	1581943	1582989	.	+	.	ID=gene1545;Dbxref=GeneID:4806235;Name=SSA_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1578
NC_009009.1	RefSeq	CDS	1581943	1582989	.	+	0	ID=cds1497;Parent=gene1545;Dbxref=Genbank:YP_001035518.1,GeneID:4806235;Name=YP_001035518.1;Note=GC: 46.51%25%3B Transporter classification TC:3.A.1.14.5. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.737. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=Fe3+-siderophore ABC transporter permease;protein_id=YP_001035518.1;transl_table=11
NC_009009.1	RefSeq	gene	1582991	1583746	.	+	.	ID=gene1546;Dbxref=GeneID:4806395;Name=SSA_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1579
NC_009009.1	RefSeq	CDS	1582991	1583746	.	+	0	ID=cds1498;Parent=gene1546;Dbxref=Genbank:YP_001035519.1,GeneID:4806395;Name=YP_001035519.1;Note=GC: 46.96%25%3B Transporter classification TC:3.A.1.14.2. Codon Adaptation Index (CAI): 0.749. Curator(s): J. Alves;gbkey=CDS;product=Fe3+-siderophore ABC transporter ATPase;protein_id=YP_001035519.1;transl_table=11
NC_009009.1	RefSeq	gene	1583802	1584830	.	+	.	ID=gene1547;Dbxref=GeneID:4806651;Name=fatB;gbkey=Gene;gene=fatB;gene_biotype=protein_coding;locus_tag=SSA_1581
NC_009009.1	RefSeq	CDS	1583802	1584830	.	+	0	ID=cds1499;Parent=gene1547;Dbxref=Genbank:YP_001035520.1,GeneID:4806651;Name=YP_001035520.1;Note=GC: 43.63%25%3B Transporter classification TC:3.A.1.14.5. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;gene=fatB;product=metal-binding ABC transporter;protein_id=YP_001035520.1;transl_table=11
NC_009009.1	RefSeq	gene	1584811	1585503	.	+	.	ID=gene1548;Dbxref=GeneID:4806135;Name=SSA_1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1582
NC_009009.1	RefSeq	CDS	1584811	1585503	.	+	0	ID=cds1500;Parent=gene1548;Dbxref=Genbank:YP_001035521.1,GeneID:4806135;Name=YP_001035521.1;Note=GC: 44.73%25%3B Codon Adaptation Index (CAI): 0.727. Curator(s): J. Alves;gbkey=CDS;product=alpha-beta hydrolase superfamily esterase;protein_id=YP_001035521.1;transl_table=11
NC_009009.1	RefSeq	gene	1585613	1586116	.	-	.	ID=gene1549;Dbxref=GeneID:4806218;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=SSA_1583
NC_009009.1	RefSeq	CDS	1585613	1586116	.	-	0	ID=cds1501;Parent=gene1549;Dbxref=Genbank:YP_001035522.1,GeneID:4806218;Name=YP_001035522.1;Note=GC: 47.02%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;gene=ogt;product=6-O-methylguanine DNA methyltransferase;protein_id=YP_001035522.1;transl_table=11
NC_009009.1	RefSeq	gene	1586152	1587120	.	-	.	ID=gene1550;Dbxref=GeneID:4806126;Name=SSA_1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1584
NC_009009.1	RefSeq	CDS	1586152	1587120	.	-	0	ID=cds1502;Parent=gene1550;Dbxref=Genbank:YP_001035523.1,GeneID:4806126;Name=YP_001035523.1;Note=GC: 44.99%25%3B Codon Adaptation Index (CAI): 0.756. Curator(s): J. Alves;gbkey=CDS;product=ring-cleavage extradiol dioxygenase;protein_id=YP_001035523.1;transl_table=11
NC_009009.1	RefSeq	gene	1587065	1587694	.	-	.	ID=gene1551;Dbxref=GeneID:4805766;Name=SSA_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1585
NC_009009.1	RefSeq	CDS	1587065	1587694	.	-	0	ID=cds1503;Parent=gene1551;Dbxref=Genbank:YP_001035524.1,GeneID:4805766;Name=YP_001035524.1;Note=GC: 43.97%25%3B Codon Adaptation Index (CAI): 0.788.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035524.1;transl_table=11
NC_009009.1	RefSeq	gene	1587820	1588272	.	-	.	ID=gene1552;Dbxref=GeneID:4806186;Name=SSA_1586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1586
NC_009009.1	RefSeq	CDS	1587820	1588272	.	-	0	ID=cds1504;Parent=gene1552;Dbxref=Genbank:YP_001035525.1,GeneID:4806186;Name=YP_001035525.1;Note=GC: 48.79%25%3B Codon Adaptation Index (CAI): 0.802. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035525.1;transl_table=11
NC_009009.1	RefSeq	gene	1588328	1589176	.	-	.	ID=gene1553;Dbxref=GeneID:4806190;Name=SSA_1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1587
NC_009009.1	RefSeq	CDS	1588328	1589176	.	-	0	ID=cds1505;Parent=gene1553;Dbxref=Genbank:YP_001035526.1,GeneID:4806190;Name=YP_001035526.1;Note=GC: 49.59%25%3B Codon Adaptation Index (CAI): 0.745.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035526.1;transl_table=11
NC_009009.1	RefSeq	gene	1589272	1591995	.	-	.	ID=gene1554;Dbxref=GeneID:4806255;Name=SSA_1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1588
NC_009009.1	RefSeq	CDS	1589272	1591995	.	-	0	ID=cds1506;Parent=gene1554;Dbxref=Genbank:YP_001035527.1,GeneID:4806255;Name=YP_001035527.1;Note=GC: 45.85%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.766. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.976)%3B Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_001035527.1;transl_table=11
NC_009009.1	RefSeq	gene	1591997	1592698	.	-	.	ID=gene1555;Dbxref=GeneID:4806378;Name=SSA_1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1589
NC_009009.1	RefSeq	CDS	1591997	1592698	.	-	0	ID=cds1507;Parent=gene1555;Dbxref=Genbank:YP_001035528.1,GeneID:4806378;Name=YP_001035528.1;Note=GC: 47.15%25%3B Transporter classification TC:3.A.1.125.1. Codon Adaptation Index (CAI): 0.766. Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001035528.1;transl_table=11
NC_009009.1	RefSeq	gene	1592842	1593402	.	+	.	ID=gene1556;Dbxref=GeneID:4806102;Name=SSA_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1590
NC_009009.1	RefSeq	CDS	1592842	1593402	.	+	0	ID=cds1508;Parent=gene1556;Dbxref=Genbank:YP_001035529.1,GeneID:4806102;Name=YP_001035529.1;Note=GC: 39.93%25%3B Codon Adaptation Index (CAI): 0.727. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001035529.1;transl_table=11
NC_009009.1	RefSeq	gene	1593493	1595541	.	-	.	ID=gene1557;Dbxref=GeneID:4806287;Name=SSA_1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1591
NC_009009.1	RefSeq	CDS	1593493	1595541	.	-	0	ID=cds1509;Parent=gene1557;Dbxref=Genbank:YP_001035530.1,GeneID:4806287;Name=YP_001035530.1;Note=GC: 46.12%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.927).;gbkey=CDS;product=dipeptidase;protein_id=YP_001035530.1;transl_table=11
NC_009009.1	RefSeq	gene	1595666	1596487	.	-	.	ID=gene1558;Dbxref=GeneID:4805802;Name=SSA_1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1592
NC_009009.1	RefSeq	CDS	1595666	1596487	.	-	0	ID=cds1510;Parent=gene1558;Dbxref=Genbank:YP_001035531.1,GeneID:4805802;Name=YP_001035531.1;Note=GC: 42.82%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035531.1;transl_table=11
NC_009009.1	RefSeq	gene	1596480	1598144	.	-	.	ID=gene1559;Dbxref=GeneID:4806271;Name=SSA_1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1593
NC_009009.1	RefSeq	CDS	1596480	1598144	.	-	0	ID=cds1511;Parent=gene1559;Dbxref=Genbank:YP_001035532.1,GeneID:4806271;Name=YP_001035532.1;Note=GC: 44.38%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).;gbkey=CDS;product=dipeptidase;protein_id=YP_001035532.1;transl_table=11
NC_009009.1	RefSeq	gene	1598547	1600616	.	-	.	ID=gene1560;Dbxref=GeneID:4806478;Name=SSA_1594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1594
NC_009009.1	RefSeq	CDS	1598547	1600616	.	-	0	ID=cds1512;Parent=gene1560;Dbxref=Genbank:YP_001035533.1,GeneID:4806478;Name=YP_001035533.1;Note=GC: 41.79%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.816).;gbkey=CDS;product=metalloendopeptidase;protein_id=YP_001035533.1;transl_table=11
NC_009009.1	RefSeq	gene	1601041	1601904	.	-	.	ID=gene1561;Dbxref=GeneID:4808041;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=SSA_1595
NC_009009.1	RefSeq	CDS	1601041	1601904	.	-	0	ID=cds1513;Parent=gene1561;Dbxref=Genbank:YP_001035534.1,GeneID:4808041;Name=YP_001035534.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;gene=tehB;product=tellurite resistance protein TehB;protein_id=YP_001035534.1;transl_table=11
NC_009009.1	RefSeq	gene	1602165	1603124	.	-	.	ID=gene1562;Dbxref=GeneID:4807629;Name=SSA_1596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1596
NC_009009.1	RefSeq	CDS	1602165	1603124	.	-	0	ID=cds1514;Parent=gene1562;Dbxref=Genbank:YP_001035535.1,GeneID:4807629;Name=YP_001035535.1;Note=GC: 32.6%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.789. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.618)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035535.1;transl_table=11
NC_009009.1	RefSeq	gene	1603357	1604325	.	-	.	ID=gene1563;Dbxref=GeneID:4806113;Name=SSA_1597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1597
NC_009009.1	RefSeq	CDS	1603357	1604325	.	-	0	ID=cds1515;Parent=gene1563;Dbxref=Genbank:YP_001035536.1,GeneID:4806113;Name=YP_001035536.1;Note=GC: 35.4%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.752. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.786)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035536.1;transl_table=11
NC_009009.1	RefSeq	gene	1604384	1605328	.	-	.	ID=gene1564;Dbxref=GeneID:4807168;Name=SSA_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1598
NC_009009.1	RefSeq	CDS	1604384	1605328	.	-	0	ID=cds1516;Parent=gene1564;Dbxref=Genbank:YP_001035537.1,GeneID:4807168;Name=YP_001035537.1;Note=GC: 31.11%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.656)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035537.1;transl_table=11
NC_009009.1	RefSeq	gene	1605532	1606506	.	-	.	ID=gene1565;Dbxref=GeneID:4806165;Name=SSA_1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1599
NC_009009.1	RefSeq	CDS	1605532	1606506	.	-	0	ID=cds1517;Parent=gene1565;Dbxref=Genbank:YP_001035538.1,GeneID:4806165;Name=YP_001035538.1;Note=GC: 32.62%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.757. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035538.1;transl_table=11
NC_009009.1	RefSeq	gene	1606587	1606685	.	-	.	ID=gene1566;Dbxref=GeneID:4806011;Name=SSA_1600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1600
NC_009009.1	RefSeq	CDS	1606587	1606685	.	-	0	ID=cds1518;Parent=gene1566;Dbxref=Genbank:YP_001035539.1,GeneID:4806011;Name=YP_001035539.1;Note=GC: 40.4%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.732. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035539.1;transl_table=11
NC_009009.1	RefSeq	gene	1606682	1607149	.	-	.	ID=gene1567;Dbxref=GeneID:4807519;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SSA_1601
NC_009009.1	RefSeq	CDS	1606682	1607149	.	-	0	ID=cds1519;Parent=gene1567;Dbxref=Genbank:YP_001035540.1,GeneID:4807519;Name=YP_001035540.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=YP_001035540.1;transl_table=11
NC_009009.1	RefSeq	gene	1607112	1609460	.	-	.	ID=gene1568;Dbxref=GeneID:4807763;Name=vacB;gbkey=Gene;gene=vacB;gene_biotype=protein_coding;locus_tag=SSA_1602
NC_009009.1	RefSeq	CDS	1607112	1609460	.	-	0	ID=cds1520;Parent=gene1568;Dbxref=Genbank:YP_001035541.1,GeneID:4807763;Name=YP_001035541.1;Note=GC: 48.36%25%3B Codon Adaptation Index (CAI): 0.784.;gbkey=CDS;gene=vacB;product=VacB/Rnb family exoribonuclease;protein_id=YP_001035541.1;transl_table=11
NC_009009.1	RefSeq	gene	1609501	1610124	.	-	.	ID=gene1569;Dbxref=GeneID:4807236;Name=SSA_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1603
NC_009009.1	RefSeq	CDS	1609501	1610124	.	-	0	ID=cds1521;Parent=gene1569;Dbxref=Genbank:YP_001035542.1,GeneID:4807236;Name=YP_001035542.1;Note=GC: 33.01%25%3B Codon Adaptation Index (CAI): 0.744.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035542.1;transl_table=11
NC_009009.1	RefSeq	gene	1610288	1610521	.	-	.	ID=gene1570;Dbxref=GeneID:4807116;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SSA_1604
NC_009009.1	RefSeq	CDS	1610288	1610521	.	-	0	ID=cds1522;Parent=gene1570;Dbxref=Genbank:YP_001035543.1,GeneID:4807116;Name=YP_001035543.1;Note=GC: 37.18%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.742. SignalP prediction: Yes (prob. 0.972)%3B Curator(s): J. Alves;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=YP_001035543.1;transl_table=11
NC_009009.1	RefSeq	gene	1610713	1611822	.	-	.	ID=gene1571;Dbxref=GeneID:4807403;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=SSA_1605
NC_009009.1	RefSeq	CDS	1610713	1611822	.	-	0	ID=cds1523;Parent=gene1571;Dbxref=Genbank:YP_001035544.1,GeneID:4807403;Name=YP_001035544.1;Note=GC: 48.02%25%3B Transporter classification TC:2.A.1.2.20. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.739. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=pmrA;product=major facilitator superfamily multi-drug resistance efflux pump PmrA;protein_id=YP_001035544.1;transl_table=11
NC_009009.1	RefSeq	gene	1611919	1612515	.	-	.	ID=gene1572;Dbxref=GeneID:4807030;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SSA_1606
NC_009009.1	RefSeq	CDS	1611919	1612515	.	-	0	ID=cds1524;Parent=gene1572;Dbxref=Genbank:YP_001035545.1,GeneID:4807030;Name=YP_001035545.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=YP_001035545.1;transl_table=11
NC_009009.1	RefSeq	gene	1612521	1613345	.	-	.	ID=gene1573;Dbxref=GeneID:4807282;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=SSA_1607
NC_009009.1	RefSeq	CDS	1612521	1613345	.	-	0	ID=cds1525;Parent=gene1573;Dbxref=Genbank:YP_001035546.1,GeneID:4807282;Name=YP_001035546.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;gene=mutM;product=formamidopyrimidine-DNA glycosylase;protein_id=YP_001035546.1;transl_table=11
NC_009009.1	RefSeq	gene	1613373	1613843	.	-	.	ID=gene1574;Dbxref=GeneID:4807326;Name=SSA_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1608
NC_009009.1	RefSeq	CDS	1613373	1613843	.	-	0	ID=cds1526;Parent=gene1574;Dbxref=Genbank:YP_001035547.1,GeneID:4807326;Name=YP_001035547.1;Note=GC: 42.68%25%3B Codon Adaptation Index (CAI): 0.812.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035547.1;transl_table=11
NC_009009.1	RefSeq	gene	1614094	1614999	.	-	.	ID=gene1575;Dbxref=GeneID:4807675;Name=SSA_1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1610
NC_009009.1	RefSeq	CDS	1614094	1614999	.	-	0	ID=cds1527;Parent=gene1575;Dbxref=Genbank:YP_001035548.1,GeneID:4807675;Name=YP_001035548.1;Note=GC: 43.38%25%3B Codon Adaptation Index (CAI): 0.775. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035548.1;transl_table=11
NC_009009.1	RefSeq	gene	1615223	1616122	.	-	.	ID=gene1576;Dbxref=GeneID:4807564;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;gene_synonym=bex,rbaA,sdgE,yqfH;locus_tag=SSA_1611
NC_009009.1	RefSeq	CDS	1615223	1616122	.	-	0	ID=cds1528;Parent=gene1576;Dbxref=Genbank:YP_001035549.1,GeneID:4807564;Name=YP_001035549.1;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=YP_001035549.1;transl_table=11
NC_009009.1	RefSeq	gene	1616189	1616587	.	-	.	ID=gene1577;Dbxref=GeneID:4806598;Name=dgk;gbkey=Gene;gene=dgk;gene_biotype=protein_coding;locus_tag=SSA_1612
NC_009009.1	RefSeq	CDS	1616189	1616587	.	-	0	ID=cds1529;Parent=gene1577;Dbxref=Genbank:YP_001035550.1,GeneID:4806598;Name=YP_001035550.1;Note=GC: 44.36%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;gene=dgk;product=diacylglycerol kinase;protein_id=YP_001035550.1;transl_table=11
NC_009009.1	RefSeq	gene	1616568	1617065	.	-	.	ID=gene1578;Dbxref=GeneID:4807485;Name=SSA_1613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1613
NC_009009.1	RefSeq	CDS	1616568	1617065	.	-	0	ID=cds1530;Parent=gene1578;Dbxref=Genbank:YP_001035551.1,GeneID:4807485;Name=YP_001035551.1;Note=GC: 46.39%25%3B Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=metalloprotease;protein_id=YP_001035551.1;transl_table=11
NC_009009.1	RefSeq	gene	1617445	1617517	.	-	.	ID=gene1579;Dbxref=GeneID:4805950;Name=SSA_2466;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2466
NC_009009.1	RefSeq	tRNA	1617445	1617517	.	-	.	ID=rna46;Parent=gene1579;Dbxref=GeneID:4805950;Note=tRNA-Thr_4;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	exon	1617445	1617517	.	-	.	ID=id47;Parent=rna46;Dbxref=GeneID:4805950;Note=tRNA-Thr_4;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	gene	1617566	1618135	.	-	.	ID=gene1580;Dbxref=GeneID:4805887;Name=SSA_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1614
NC_009009.1	RefSeq	CDS	1617566	1618135	.	-	0	ID=cds1531;Parent=gene1580;Dbxref=Genbank:YP_001035552.1,GeneID:4805887;Name=YP_001035552.1;Note=GC: 44.39%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035552.1;transl_table=11
NC_009009.1	RefSeq	gene	1618266	1619378	.	+	.	ID=gene1581;Dbxref=GeneID:4807644;Name=SSA_1615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1615
NC_009009.1	RefSeq	CDS	1618266	1619378	.	+	0	ID=cds1532;Parent=gene1581;Dbxref=Genbank:YP_001035553.1,GeneID:4807644;Name=YP_001035553.1;Note=GC: 49.33%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): J. Alves;gbkey=CDS;product=alanine dehydrogenase;protein_id=YP_001035553.1;transl_table=11
NC_009009.1	RefSeq	gene	1619446	1620348	.	-	.	ID=gene1582;Dbxref=GeneID:4807514;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=SSA_1616
NC_009009.1	RefSeq	CDS	1619446	1620348	.	-	0	ID=cds1533;Parent=gene1582;Dbxref=Genbank:YP_001035554.1,GeneID:4807514;Name=YP_001035554.1;Note=GC: 47.4%25%3B Codon Adaptation Index (CAI): 0.795.;gbkey=CDS;gene=phoH;product=PhoH-like protein;protein_id=YP_001035554.1;transl_table=11
NC_009009.1	RefSeq	gene	1620526	1620741	.	-	.	ID=gene1583;Dbxref=GeneID:4806376;Name=SSA_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1617
NC_009009.1	RefSeq	CDS	1620526	1620741	.	-	0	ID=cds1534;Parent=gene1583;Dbxref=Genbank:YP_001035555.1,GeneID:4806376;Name=YP_001035555.1;Note=GC: 43.52%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035555.1;transl_table=11
NC_009009.1	RefSeq	gene	1620810	1621664	.	-	.	ID=gene1584;Dbxref=GeneID:4806785;Name=SSA_1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1618
NC_009009.1	RefSeq	CDS	1620810	1621664	.	-	0	ID=cds1535;Parent=gene1584;Dbxref=Genbank:YP_001035556.1,GeneID:4806785;Name=YP_001035556.1;Note=GC: 48.77%25%3B Codon Adaptation Index (CAI): 0.795. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035556.1;transl_table=11
NC_009009.1	RefSeq	gene	1621769	1622326	.	-	.	ID=gene1585;Dbxref=GeneID:4805953;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SSA_1619
NC_009009.1	RefSeq	CDS	1621769	1622326	.	-	0	ID=cds1536;Parent=gene1585;Dbxref=Genbank:YP_001035557.1,GeneID:4805953;Name=YP_001035557.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=YP_001035557.1;transl_table=11
NC_009009.1	RefSeq	gene	1622346	1623071	.	-	.	ID=gene1586;Dbxref=GeneID:4807588;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SSA_1620
NC_009009.1	RefSeq	CDS	1622346	1623071	.	-	0	ID=cds1537;Parent=gene1586;Dbxref=Genbank:YP_001035558.1,GeneID:4807588;Name=YP_001035558.1;Note=Catalyzes the phosphorylation of UMP to UDP;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=YP_001035558.1;transl_table=11
NC_009009.1	RefSeq	gene	1623262	1624713	.	-	.	ID=gene1587;Dbxref=GeneID:4806982;Name=SSA_1621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1621
NC_009009.1	RefSeq	CDS	1623262	1624713	.	-	0	ID=cds1538;Parent=gene1587;Dbxref=Genbank:YP_001035559.1,GeneID:4806982;Name=YP_001035559.1;Note=GC: 46.42%25%3B Transporter classification TC:2.A.3.7.1. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.77. Curator(s): J. Alves;gbkey=CDS;product=amino acid transporter;protein_id=YP_001035559.1;transl_table=11
NC_009009.1	RefSeq	gene	1624842	1625531	.	-	.	ID=gene1588;Dbxref=GeneID:4806973;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=SSA_1622
NC_009009.1	RefSeq	CDS	1624842	1625531	.	-	0	ID=cds1539;Parent=gene1588;Dbxref=Genbank:YP_001035560.1,GeneID:4806973;Name=YP_001035560.1;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=YP_001035560.1;transl_table=11
NC_009009.1	RefSeq	gene	1625633	1626058	.	-	.	ID=gene1589;Dbxref=GeneID:4807140;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=SSA_1623
NC_009009.1	RefSeq	CDS	1625633	1626058	.	-	0	ID=cds1540;Parent=gene1589;Dbxref=Genbank:YP_001035561.1,GeneID:4807140;Name=YP_001035561.1;Note=binds directly to 23S ribosomal RNA;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=YP_001035561.1;transl_table=11
NC_009009.1	RefSeq	gene	1626210	1626557	.	+	.	ID=gene1590;Dbxref=GeneID:4807506;Name=SSA_1624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1624
NC_009009.1	RefSeq	CDS	1626210	1626557	.	+	0	ID=cds1541;Parent=gene1590;Dbxref=Genbank:YP_001035562.1,GeneID:4807506;Name=YP_001035562.1;Note=GC: 38.79%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.727. SignalP prediction: Yes (prob. 0.49).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035562.1;transl_table=11
NC_009009.1	RefSeq	gene	1626667	1627053	.	-	.	ID=gene1591;Dbxref=GeneID:4808042;Name=SSA_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1625
NC_009009.1	RefSeq	CDS	1626667	1627053	.	-	0	ID=cds1542;Parent=gene1591;Dbxref=Genbank:YP_001035563.1,GeneID:4808042;Name=YP_001035563.1;Note=GC: 49.1%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=lactoylglutathione lyase;protein_id=YP_001035563.1;transl_table=11
NC_009009.1	RefSeq	gene	1627167	1629467	.	-	.	ID=gene1592;Dbxref=GeneID:4807416;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=SSA_1626
NC_009009.1	RefSeq	CDS	1627167	1629467	.	-	0	ID=cds1543;Parent=gene1592;Dbxref=Genbank:YP_001035564.1,GeneID:4807416;Name=YP_001035564.1;Note=GC: 48.15%25%3B Transporter classification TC:3.A.12.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.772. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=ftsK;product=DNA translocase ftsK;protein_id=YP_001035564.1;transl_table=11
NC_009009.1	RefSeq	gene	1629598	1629780	.	-	.	ID=gene1593;Dbxref=GeneID:4807430;Name=SSA_1627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1627
NC_009009.1	RefSeq	CDS	1629598	1629780	.	-	0	ID=cds1544;Parent=gene1593;Dbxref=Genbank:YP_001035565.1,GeneID:4807430;Name=YP_001035565.1;Note=GC: 43.72%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035565.1;transl_table=11
NC_009009.1	RefSeq	gene	1630004	1630423	.	+	.	ID=gene1594;Dbxref=GeneID:4807438;Name=SSA_1628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1628
NC_009009.1	RefSeq	CDS	1630004	1630423	.	+	0	ID=cds1545;Parent=gene1594;Dbxref=Genbank:YP_001035566.1,GeneID:4807438;Name=YP_001035566.1;Note=GC: 47.38%25%3B Codon Adaptation Index (CAI): 0.751.;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_001035566.1;transl_table=11
NC_009009.1	RefSeq	gene	1630478	1631296	.	+	.	ID=gene1595;Dbxref=GeneID:4807343;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;locus_tag=SSA_1629
NC_009009.1	RefSeq	CDS	1630478	1631296	.	+	0	ID=cds1546;Parent=gene1595;Dbxref=Genbank:YP_001035567.1,GeneID:4807343;Name=YP_001035567.1;Note=GC: 44.2%25%3B Codon Adaptation Index (CAI): 0.792. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.903).;gbkey=CDS;gene=ppiA;product=cyclophilin type peptidyl-prolyl cis-trans isomerase;protein_id=YP_001035567.1;transl_table=11
NC_009009.1	RefSeq	gene	1631332	1631568	.	+	.	ID=gene1596;Dbxref=GeneID:4807335;Name=SSA_1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1630
NC_009009.1	RefSeq	CDS	1631332	1631568	.	+	0	ID=cds1547;Parent=gene1596;Dbxref=Genbank:YP_001035568.1,GeneID:4807335;Name=YP_001035568.1;Note=GC: 43.88%25%3B Codon Adaptation Index (CAI): 0.805. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035568.1;transl_table=11
NC_009009.1	RefSeq	gene	1631741	1632628	.	-	.	ID=gene1597;Dbxref=GeneID:4807024;Name=srtC;gbkey=Gene;gene=srtC;gene_biotype=protein_coding;locus_tag=SSA_1631
NC_009009.1	RefSeq	CDS	1631741	1632628	.	-	0	ID=cds1548;Parent=gene1597;Dbxref=Genbank:YP_001035569.1,GeneID:4807024;Name=YP_001035569.1;Note=GC: 39.86%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.762. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.568).;gbkey=CDS;gene=srtC;product=sortase;protein_id=YP_001035569.1;transl_table=11
NC_009009.1	RefSeq	gene	1632696	1634135	.	-	.	ID=gene1598;Dbxref=GeneID:4807242;Name=SSA_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1632
NC_009009.1	RefSeq	CDS	1632696	1634135	.	-	0	ID=cds1549;Parent=gene1598;Dbxref=Genbank:YP_001035570.1,GeneID:4807242;Name=YP_001035570.1;Note=GC: 39.31%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.775. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=surface protein;protein_id=YP_001035570.1;transl_table=11
NC_009009.1	RefSeq	gene	1634196	1635635	.	-	.	ID=gene1599;Dbxref=GeneID:4807848;Name=SSA_1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1633
NC_009009.1	RefSeq	CDS	1634196	1635635	.	-	0	ID=cds1550;Parent=gene1599;Dbxref=Genbank:YP_001035571.1,GeneID:4807848;Name=YP_001035571.1;Note=GC: 39.1%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.761. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Possible cell surface protein similar to FimA fimbrial subunit.;gbkey=CDS;product=FimA fimbrial subunit-like protein;protein_id=YP_001035571.1;transl_table=11
NC_009009.1	RefSeq	gene	1635692	1637152	.	-	.	ID=gene1600;Dbxref=GeneID:4807284;Name=SSA_1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1634
NC_009009.1	RefSeq	CDS	1635692	1637152	.	-	0	ID=cds1551;Parent=gene1600;Dbxref=Genbank:YP_001035572.1,GeneID:4807284;Name=YP_001035572.1;Note=GC: 40.45%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.755. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=Heme utilization/adhesion exoprotein;protein_id=YP_001035572.1;transl_table=11
NC_009009.1	RefSeq	gene	1637242	1639311	.	-	.	ID=gene1601;Dbxref=GeneID:4806953;Name=SSA_1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1635
NC_009009.1	RefSeq	CDS	1637242	1639311	.	-	0	ID=cds1552;Parent=gene1601;Dbxref=Genbank:YP_001035573.1,GeneID:4806953;Name=YP_001035573.1;Note=GC: 39.37%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.997)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035573.1;transl_table=11
NC_009009.1	RefSeq	gene	1639454	1640995	.	-	.	ID=gene1602;Dbxref=GeneID:4807930;Name=SSA_1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1636
NC_009009.1	RefSeq	CDS	1639454	1640995	.	-	0	ID=cds1553;Parent=gene1602;Dbxref=Genbank:YP_001035574.1,GeneID:4807930;Name=YP_001035574.1;Note=GC: 50.06%25%3B Transporter classification TC:3.A.1.120.3. Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;product=antibiotic ABC transporter ATPase;protein_id=YP_001035574.1;transl_table=11
NC_009009.1	RefSeq	gene	1641107	1641415	.	-	.	ID=gene1603;Dbxref=GeneID:4807553;Name=SSA_1638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1638
NC_009009.1	RefSeq	CDS	1641107	1641415	.	-	0	ID=cds1554;Parent=gene1603;Dbxref=Genbank:YP_001035575.1,GeneID:4807553;Name=YP_001035575.1;Note=GC: 40.13%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.816. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035575.1;transl_table=11
NC_009009.1	RefSeq	gene	1641429	1642121	.	-	.	ID=gene1604;Dbxref=GeneID:4807695;Name=pfs;gbkey=Gene;gene=pfs;gene_biotype=protein_coding;locus_tag=SSA_1639
NC_009009.1	RefSeq	CDS	1641429	1642121	.	-	0	ID=cds1555;Parent=gene1604;Dbxref=Genbank:YP_001035576.1,GeneID:4807695;Name=YP_001035576.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;gene=pfs;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=YP_001035576.1;transl_table=11
NC_009009.1	RefSeq	gene	1642198	1642620	.	-	.	ID=gene1605;Dbxref=GeneID:4807546;Name=SSA_1640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1640
NC_009009.1	RefSeq	CDS	1642198	1642620	.	-	0	ID=cds1556;Parent=gene1605;Dbxref=Genbank:YP_001035577.1,GeneID:4807546;Name=YP_001035577.1;Note=GC: 46.1%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035577.1;transl_table=11
NC_009009.1	RefSeq	gene	1642633	1643184	.	-	.	ID=gene1606;Dbxref=GeneID:4807253;Name=SSA_1641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1641
NC_009009.1	RefSeq	CDS	1642633	1643184	.	-	0	ID=cds1557;Parent=gene1606;Dbxref=Genbank:YP_001035578.1,GeneID:4807253;Name=YP_001035578.1;Note=GC: 45.47%25%3B Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_001035578.1;transl_table=11
NC_009009.1	RefSeq	gene	1643193	1644572	.	-	.	ID=gene1607;Dbxref=GeneID:4807989;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SSA_1642
NC_009009.1	RefSeq	CDS	1643193	1644572	.	-	0	ID=cds1558;Parent=gene1607;Dbxref=Genbank:YP_001035579.1,GeneID:4807989;Name=YP_001035579.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=YP_001035579.1;transl_table=11
NC_009009.1	RefSeq	gene	1644700	1645359	.	-	.	ID=gene1608;Dbxref=GeneID:4807612;Name=SSA_1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1643
NC_009009.1	RefSeq	CDS	1644700	1645359	.	-	0	ID=cds1559;Parent=gene1608;Dbxref=Genbank:YP_001035580.1,GeneID:4807612;Name=YP_001035580.1;Note=GC: 40.76%25%3B Codon Adaptation Index (CAI): 0.81.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035580.1;transl_table=11
NC_009009.1	RefSeq	gene	1645561	1645707	.	-	.	ID=gene1609;Dbxref=GeneID:4807527;Name=SSA_1644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1644
NC_009009.1	RefSeq	CDS	1645561	1645707	.	-	0	ID=cds1560;Parent=gene1609;Dbxref=Genbank:YP_001035581.1,GeneID:4807527;Name=YP_001035581.1;Note=GC: 35.37%25%3B Codon Adaptation Index (CAI): 0.725.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035581.1;transl_table=11
NC_009009.1	RefSeq	gene	1645691	1646317	.	-	.	ID=gene1610;Dbxref=GeneID:4807754;Name=SSA_1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1645
NC_009009.1	RefSeq	CDS	1645691	1646317	.	-	0	ID=cds1561;Parent=gene1610;Dbxref=Genbank:YP_001035582.1,GeneID:4807754;Name=YP_001035582.1;Note=GC: 42.9%25%3B Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035582.1;transl_table=11
NC_009009.1	RefSeq	gene	1646412	1646861	.	-	.	ID=gene1611;Dbxref=GeneID:4807933;Name=SSA_1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1646
NC_009009.1	RefSeq	CDS	1646412	1646861	.	-	0	ID=cds1562;Parent=gene1611;Dbxref=Genbank:YP_001035583.1,GeneID:4807933;Name=YP_001035583.1;Note=GC: 47.33%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035583.1;transl_table=11
NC_009009.1	RefSeq	gene	1646912	1647259	.	-	.	ID=gene1612;Dbxref=GeneID:4807595;Name=SSA_1647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1647
NC_009009.1	RefSeq	CDS	1646912	1647259	.	-	0	ID=cds1563;Parent=gene1612;Dbxref=Genbank:YP_001035584.1,GeneID:4807595;Name=YP_001035584.1;Note=GC: 37.93%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035584.1;transl_table=11
NC_009009.1	RefSeq	gene	1647256	1647999	.	-	.	ID=gene1613;Dbxref=GeneID:4807500;Name=SSA_1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1648
NC_009009.1	RefSeq	CDS	1647256	1647999	.	-	0	ID=cds1564;Parent=gene1613;Dbxref=Genbank:YP_001035585.1,GeneID:4807500;Name=YP_001035585.1;Note=GC: 46.24%25%3B Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035585.1;transl_table=11
NC_009009.1	RefSeq	gene	1647996	1648976	.	-	.	ID=gene1614;Dbxref=GeneID:4808044;Name=SSA_1649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1649
NC_009009.1	RefSeq	CDS	1647996	1648976	.	-	0	ID=cds1565;Parent=gene1614;Dbxref=Genbank:YP_001035586.1,GeneID:4808044;Name=YP_001035586.1;Note=GC: 43.02%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.589).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035586.1;transl_table=11
NC_009009.1	RefSeq	gene	1648986	1649684	.	-	.	ID=gene1615;Dbxref=GeneID:4806994;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SSA_1650
NC_009009.1	RefSeq	CDS	1648986	1649684	.	-	0	ID=cds1566;Parent=gene1615;Dbxref=Genbank:YP_001035587.1,GeneID:4806994;Name=YP_001035587.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=YP_001035587.1;transl_table=11
NC_009009.1	RefSeq	gene	1649677	1649943	.	-	.	ID=gene1616;Dbxref=GeneID:4807283;Name=SSA_1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1651
NC_009009.1	RefSeq	CDS	1649677	1649943	.	-	0	ID=cds1567;Parent=gene1616;Dbxref=Genbank:YP_001035588.1,GeneID:4807283;Name=YP_001035588.1;Note=GC: 45.69%25%3B Codon Adaptation Index (CAI): 0.775.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035588.1;transl_table=11
NC_009009.1	RefSeq	gene	1650045	1650419	.	-	.	ID=gene1617;Dbxref=GeneID:4807255;Name=SSA_1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1652
NC_009009.1	RefSeq	CDS	1650045	1650419	.	-	0	ID=cds1568;Parent=gene1617;Dbxref=Genbank:YP_001035589.1,GeneID:4807255;Name=YP_001035589.1;Note=GC: 46.4%25%3B Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035589.1;transl_table=11
NC_009009.1	RefSeq	gene	1650499	1651461	.	-	.	ID=gene1618;Dbxref=GeneID:4808014;Name=SSA_1653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1653
NC_009009.1	RefSeq	CDS	1650499	1651461	.	-	0	ID=cds1569;Parent=gene1618;Dbxref=Genbank:YP_001035590.1,GeneID:4808014;Name=YP_001035590.1;Note=GC: 33.64%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.811).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035590.1;transl_table=11
NC_009009.1	RefSeq	gene	1651481	1651906	.	-	.	ID=gene1619;Dbxref=GeneID:4807122;Name=SSA_1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1655
NC_009009.1	RefSeq	CDS	1651481	1651906	.	-	0	ID=cds1570;Parent=gene1619;Dbxref=Genbank:YP_001035591.1,GeneID:4807122;Name=YP_001035591.1;Note=GC: 48.36%25%3B Codon Adaptation Index (CAI): 0.726.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035591.1;transl_table=11
NC_009009.1	RefSeq	gene	1651970	1652980	.	-	.	ID=gene1620;Dbxref=GeneID:4806891;Name=SSA_1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1656
NC_009009.1	RefSeq	CDS	1651970	1652980	.	-	0	ID=cds1571;Parent=gene1620;Dbxref=Genbank:YP_001035592.1,GeneID:4806891;Name=YP_001035592.1;Note=GC: 42.63%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=nisin resistance protein;protein_id=YP_001035592.1;transl_table=11
NC_009009.1	RefSeq	gene	1653052	1653321	.	-	.	ID=gene1621;Dbxref=GeneID:4807472;Name=SSA_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1657
NC_009009.1	RefSeq	CDS	1653052	1653321	.	-	0	ID=cds1572;Parent=gene1621;Dbxref=Genbank:YP_001035593.1,GeneID:4807472;Name=YP_001035593.1;Note=GC: 40.37%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.78. SignalP prediction: Yes (prob. 0.744)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035593.1;transl_table=11
NC_009009.1	RefSeq	gene	1653364	1654764	.	-	.	ID=gene1622;Dbxref=GeneID:4806943;Name=SSA_1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1658
NC_009009.1	RefSeq	CDS	1653364	1654764	.	-	0	ID=cds1573;Parent=gene1622;Dbxref=Genbank:YP_001035594.1,GeneID:4806943;Name=YP_001035594.1;Note=GC: 47.39%25%3B Transporter classification TC:2.A.3.3.1. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.761. SignalP prediction: Yes (prob. 0.969)%3B Curator(s): J. Alves;gbkey=CDS;product=cationic amino acid transporter;protein_id=YP_001035594.1;transl_table=11
NC_009009.1	RefSeq	gene	1654921	1656909	.	-	.	ID=gene1623;Dbxref=GeneID:4807409;Name=SSA_1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1659
NC_009009.1	RefSeq	CDS	1654921	1656909	.	-	0	ID=cds1574;Parent=gene1623;Dbxref=Genbank:YP_001035595.1,GeneID:4807409;Name=YP_001035595.1;Note=GC: 36.85%25%3B Transporter classification TC:3.A.1.123.4. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.757. SignalP prediction: Yes (prob. 0.98)%3B Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_001035595.1;transl_table=11
NC_009009.1	RefSeq	gene	1656909	1657670	.	-	.	ID=gene1624;Dbxref=GeneID:4807730;Name=SSA_1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1660
NC_009009.1	RefSeq	CDS	1656909	1657670	.	-	0	ID=cds1575;Parent=gene1624;Dbxref=Genbank:YP_001035596.1,GeneID:4807730;Name=YP_001035596.1;Note=GC: 48.95%25%3B Transporter classification TC:3.A.1.123.4. Codon Adaptation Index (CAI): 0.752. Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001035596.1;transl_table=11
NC_009009.1	RefSeq	gene	1657849	1658094	.	-	.	ID=gene1625;Dbxref=GeneID:4807693;Name=SSA_1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1661
NC_009009.1	RefSeq	CDS	1657849	1658094	.	-	0	ID=cds1576;Parent=gene1625;Dbxref=Genbank:YP_001035597.1,GeneID:4807693;Name=YP_001035597.1;Note=GC: 38.21%25%3B Codon Adaptation Index (CAI): 0.74. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035597.1;transl_table=11
NC_009009.1	RefSeq	gene	1658325	1659512	.	-	.	ID=gene1626;Dbxref=GeneID:4807580;Name=SSA_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1662
NC_009009.1	RefSeq	CDS	1658325	1659512	.	-	0	ID=cds1577;Parent=gene1626;Dbxref=Genbank:YP_001035598.1,GeneID:4807580;Name=YP_001035598.1;Note=GC: 45.37%25%3B Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=NADH-dependent oxidoreductase;protein_id=YP_001035598.1;transl_table=11
NC_009009.1	RefSeq	gene	1659676	1664211	.	-	.	ID=gene1627;Dbxref=GeneID:4807379;Name=cpbA;gbkey=Gene;gene=cpbA;gene_biotype=protein_coding;locus_tag=SSA_1663
NC_009009.1	RefSeq	CDS	1659676	1664211	.	-	0	ID=cds1578;Parent=gene1627;Dbxref=Genbank:YP_001035599.1,GeneID:4807379;Name=YP_001035599.1;Note=GC: 43.92%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): T. Kitten;gbkey=CDS;gene=cpbA;product=collagen-binding protein A;protein_id=YP_001035599.1;transl_table=11
NC_009009.1	RefSeq	gene	1664539	1665279	.	-	.	ID=gene1628;Dbxref=GeneID:4806400;Name=SSA_1664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1664
NC_009009.1	RefSeq	CDS	1664539	1665279	.	-	0	ID=cds1579;Parent=gene1628;Dbxref=Genbank:YP_001035600.1,GeneID:4806400;Name=YP_001035600.1;Note=GC: 45.48%25%3B Codon Adaptation Index (CAI): 0.758.;gbkey=CDS;product=phosphatidylethanolamine N-methyltransferase;protein_id=YP_001035600.1;transl_table=11
NC_009009.1	RefSeq	gene	1665312	1665443	.	-	.	ID=gene1629;Dbxref=GeneID:4806106;Name=SSA_1665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1665
NC_009009.1	RefSeq	CDS	1665312	1665443	.	-	0	ID=cds1580;Parent=gene1629;Dbxref=Genbank:YP_001035601.1,GeneID:4806106;Name=YP_001035601.1;Note=GC: 38.64%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035601.1;transl_table=11
NC_009009.1	RefSeq	gene	1665465	1667402	.	-	.	ID=gene1630;Dbxref=GeneID:4806481;Name=SSA_1666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1666
NC_009009.1	RefSeq	CDS	1665465	1667402	.	-	0	ID=cds1581;Parent=gene1630;Dbxref=Genbank:YP_001035602.1,GeneID:4806481;Name=YP_001035602.1;Note=GC: 45.05%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.787. SignalP prediction: Yes (prob. 0.999).;gbkey=CDS;product=collagen-binding surface protein;protein_id=YP_001035602.1;transl_table=11
NC_009009.1	RefSeq	gene	1667609	1667794	.	-	.	ID=gene1631;Dbxref=GeneID:4806211;Name=SSA_1667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1667
NC_009009.1	RefSeq	CDS	1667609	1667794	.	-	0	ID=cds1582;Parent=gene1631;Dbxref=Genbank:YP_001035603.1,GeneID:4806211;Name=YP_001035603.1;Note=GC: 44.09%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.733. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.799).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035603.1;transl_table=11
NC_009009.1	RefSeq	gene	1667828	1668181	.	-	.	ID=gene1632;Dbxref=GeneID:4807650;Name=SSA_1668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1668
NC_009009.1	RefSeq	CDS	1667828	1668181	.	-	0	ID=cds1583;Parent=gene1632;Dbxref=Genbank:YP_001035604.1,GeneID:4807650;Name=YP_001035604.1;Note=GC: 44.63%25%3B Codon Adaptation Index (CAI): 0.813.;gbkey=CDS;product=NrdI protein;protein_id=YP_001035604.1;transl_table=11
NC_009009.1	RefSeq	gene	1668185	1668532	.	-	.	ID=gene1633;Dbxref=GeneID:4807651;Name=SSA_1669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1669
NC_009009.1	RefSeq	CDS	1668185	1668532	.	-	0	ID=cds1584;Parent=gene1633;Dbxref=Genbank:YP_001035605.1,GeneID:4807651;Name=YP_001035605.1;Note=GC: 45.11%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.784. SignalP prediction: Yes (prob. 0.904).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035605.1;transl_table=11
NC_009009.1	RefSeq	gene	1668727	1669338	.	-	.	ID=gene1634;Dbxref=GeneID:4806356;Name=SSA_1670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1670
NC_009009.1	RefSeq	CDS	1668727	1669338	.	-	0	ID=cds1585;Parent=gene1634;Dbxref=Genbank:YP_001035606.1,GeneID:4806356;Name=YP_001035606.1;Note=GC: 41.83%25%3B Codon Adaptation Index (CAI): 0.772. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001035606.1;transl_table=11
NC_009009.1	RefSeq	gene	1669444	1670397	.	+	.	ID=gene1635;Dbxref=GeneID:4808047;Name=SSA_1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1671
NC_009009.1	RefSeq	CDS	1669444	1670397	.	+	0	ID=cds1586;Parent=gene1635;Dbxref=Genbank:YP_001035607.1,GeneID:4808047;Name=YP_001035607.1;Note=GC: 42.35%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.766. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.993).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035607.1;transl_table=11
NC_009009.1	RefSeq	gene	1670381	1670479	.	-	.	ID=gene1636;Dbxref=GeneID:4806314;Name=SSA_1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1672
NC_009009.1	RefSeq	CDS	1670381	1670479	.	-	0	ID=cds1587;Parent=gene1636;Dbxref=Genbank:YP_001035608.1,GeneID:4806314;Name=YP_001035608.1;Note=GC: 37.37%25%3B Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035608.1;transl_table=11
NC_009009.1	RefSeq	gene	1670493	1670663	.	+	.	ID=gene1637;Dbxref=GeneID:4807256;Name=SSA_1673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1673
NC_009009.1	RefSeq	CDS	1670493	1670663	.	+	0	ID=cds1588;Parent=gene1637;Dbxref=Genbank:YP_001035609.1,GeneID:4807256;Name=YP_001035609.1;Note=GC: 38.6%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.747. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.613).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035609.1;transl_table=11
NC_009009.1	RefSeq	gene	1670686	1670907	.	+	.	ID=gene1638;Dbxref=GeneID:4806813;Name=SSA_1675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1675
NC_009009.1	RefSeq	CDS	1670686	1670907	.	+	0	ID=cds1589;Parent=gene1638;Dbxref=Genbank:YP_001035610.1,GeneID:4806813;Name=YP_001035610.1;Note=GC: 41.44%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.714.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035610.1;transl_table=11
NC_009009.1	RefSeq	gene	1670948	1671403	.	-	.	ID=gene1639;Dbxref=GeneID:4807366;Name=SSA_1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1676
NC_009009.1	RefSeq	CDS	1670948	1671403	.	-	0	ID=cds1590;Parent=gene1639;Dbxref=Genbank:YP_001035611.1,GeneID:4807366;Name=YP_001035611.1;Note=GC: 45.18%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): J. Alves;gbkey=CDS;product=LytTr family transcriptional regulator;protein_id=YP_001035611.1;transl_table=11
NC_009009.1	RefSeq	gene	1671426	1672271	.	-	.	ID=gene1640;Dbxref=GeneID:4806760;Name=cylB;gbkey=Gene;gene=cylB;gene_biotype=protein_coding;locus_tag=SSA_1678
NC_009009.1	RefSeq	CDS	1671426	1672271	.	-	0	ID=cds1591;Parent=gene1640;Dbxref=Genbank:YP_001035612.1,GeneID:4806760;Name=YP_001035612.1;Note=GC: 43.03%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.73. Curator(s): J. Alves;gbkey=CDS;gene=cylB;product=multidrig ABC transporter permease;protein_id=YP_001035612.1;transl_table=11
NC_009009.1	RefSeq	gene	1672273	1673139	.	-	.	ID=gene1641;Dbxref=GeneID:4806662;Name=cylA;gbkey=Gene;gene=cylA;gene_biotype=protein_coding;locus_tag=SSA_1679
NC_009009.1	RefSeq	CDS	1672273	1673139	.	-	0	ID=cds1592;Parent=gene1641;Dbxref=Genbank:YP_001035613.1,GeneID:4806662;Name=YP_001035613.1;Note=GC: 47.64%25%3B Transporter classification TC:3.A.1.105.1. Codon Adaptation Index (CAI): 0.758. Curator(s): J. Alves;gbkey=CDS;gene=cylA;product=multidrig ABC transporter ATPase;protein_id=YP_001035613.1;transl_table=11
NC_009009.1	RefSeq	gene	1673290	1675290	.	-	.	ID=gene1642;Dbxref=GeneID:4807250;Name=SSA_1680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1680
NC_009009.1	RefSeq	CDS	1673290	1675290	.	-	0	ID=cds1593;Parent=gene1642;Dbxref=Genbank:YP_001035614.1,GeneID:4807250;Name=YP_001035614.1;Note=GC: 43.68%25%3B Transporter classification TC:3.A.1.123.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.774. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.981)%3B Curator(s): J. Alves;gbkey=CDS;product=antibiotic ABC transporter permease;protein_id=YP_001035614.1;transl_table=11
NC_009009.1	RefSeq	gene	1675271	1676050	.	-	.	ID=gene1643;Dbxref=GeneID:4806789;Name=SSA_1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1681
NC_009009.1	RefSeq	CDS	1675271	1676050	.	-	0	ID=cds1594;Parent=gene1643;Dbxref=Genbank:YP_001035615.1,GeneID:4806789;Name=YP_001035615.1;Note=GC: 48.46%25%3B Transporter classification TC:3.A.1.123.4. Codon Adaptation Index (CAI): 0.754. Curator(s): J. Alves;gbkey=CDS;product=antibiotic ABC transporter ATPase;protein_id=YP_001035615.1;transl_table=11
NC_009009.1	RefSeq	gene	1676220	1676975	.	-	.	ID=gene1644;Dbxref=GeneID:4806461;Name=SSA_1682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1682
NC_009009.1	RefSeq	CDS	1676220	1676975	.	-	0	ID=cds1595;Parent=gene1644;Dbxref=Genbank:YP_001035616.1,GeneID:4806461;Name=YP_001035616.1;Note=GC: 45.77%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.733.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035616.1;transl_table=11
NC_009009.1	RefSeq	gene	1677124	1677495	.	-	.	ID=gene1645;Dbxref=GeneID:4807626;Name=SSA_1683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1683
NC_009009.1	RefSeq	CDS	1677124	1677495	.	-	0	ID=cds1596;Parent=gene1645;Dbxref=Genbank:YP_001035617.1,GeneID:4807626;Name=YP_001035617.1;Note=GC: 45.7%25%3B Codon Adaptation Index (CAI): 0.785.;gbkey=CDS;product=NrdI protein;protein_id=YP_001035617.1;transl_table=11
NC_009009.1	RefSeq	gene	1677516	1678496	.	-	.	ID=gene1646;Dbxref=GeneID:4806363;Name=SSA_1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1684
NC_009009.1	RefSeq	CDS	1677516	1678496	.	-	0	ID=cds1597;Parent=gene1646;Dbxref=Genbank:YP_001035618.1,GeneID:4806363;Name=YP_001035618.1;Note=GC: 44.04%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.792. SignalP prediction: Yes (prob. 0.717).;gbkey=CDS;product=histidine kinase;protein_id=YP_001035618.1;transl_table=11
NC_009009.1	RefSeq	gene	1678480	1679166	.	-	.	ID=gene1647;Dbxref=GeneID:4805863;Name=SSA_1685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1685
NC_009009.1	RefSeq	CDS	1678480	1679166	.	-	0	ID=cds1598;Parent=gene1647;Dbxref=Genbank:YP_001035619.1,GeneID:4805863;Name=YP_001035619.1;Note=GC: 45.71%25%3B Codon Adaptation Index (CAI): 0.762. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035619.1;transl_table=11
NC_009009.1	RefSeq	gene	1679316	1680530	.	+	.	ID=gene1648;Dbxref=GeneID:4808066;Name=SSA_1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1686
NC_009009.1	RefSeq	CDS	1679316	1680530	.	+	0	ID=cds1599;Parent=gene1648;Dbxref=Genbank:YP_001035620.1,GeneID:4808066;Name=YP_001035620.1;Note=GC: 46.67%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035620.1;transl_table=11
NC_009009.1	RefSeq	gene	1680687	1681883	.	+	.	ID=gene1649;Dbxref=GeneID:4807322;Name=SSA_1687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1687
NC_009009.1	RefSeq	CDS	1680687	1681883	.	+	0	ID=cds1600;Parent=gene1649;Dbxref=Genbank:YP_001035621.1,GeneID:4807322;Name=YP_001035621.1;Note=GC: 45.03%25%3B Transporter classification TC:1.A.20.6.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.769. SignalP prediction: Yes (prob. 0.978)%3B Curator(s): J. Alves;gbkey=CDS;product=NADH-binding ferric-oxidoreductase;protein_id=YP_001035621.1;transl_table=11
NC_009009.1	RefSeq	gene	1682035	1682595	.	-	.	ID=gene1650;Dbxref=GeneID:4807099;Name=SSA_1689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1689
NC_009009.1	RefSeq	CDS	1682035	1682595	.	-	0	ID=cds1601;Parent=gene1650;Dbxref=Genbank:YP_001035622.1,GeneID:4807099;Name=YP_001035622.1;Note=GC: 36.19%25%3B Codon Adaptation Index (CAI): 0.798. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Weakly similar to apolipoprotein domains. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035622.1;transl_table=11
NC_009009.1	RefSeq	gene	1682881	1683408	.	+	.	ID=gene1651;Dbxref=GeneID:4807341;Name=SSA_1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1690
NC_009009.1	RefSeq	CDS	1682881	1683408	.	+	0	ID=cds1602;Parent=gene1651;Dbxref=Genbank:YP_001035623.1,GeneID:4807341;Name=YP_001035623.1;Note=GC: 36.93%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035623.1;transl_table=11
NC_009009.1	RefSeq	gene	1683421	1683630	.	+	.	ID=gene1652;Dbxref=GeneID:4806975;Name=SSA_1691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1691
NC_009009.1	RefSeq	CDS	1683421	1683630	.	+	0	ID=cds1603;Parent=gene1652;Dbxref=Genbank:YP_001035624.1,GeneID:4806975;Name=YP_001035624.1;Note=GC: 43.81%25%3B Codon Adaptation Index (CAI): 0.808. Curator(s): J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001035624.1;transl_table=11
NC_009009.1	RefSeq	gene	1683690	1685096	.	-	.	ID=gene1653;Dbxref=GeneID:4807102;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=SSA_1692
NC_009009.1	RefSeq	CDS	1683690	1685096	.	-	0	ID=cds1604;Parent=gene1653;Dbxref=Genbank:YP_001035625.1,GeneID:4807102;Name=YP_001035625.1;Note=catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside;gbkey=CDS;gene=lacG;product=6-phospho-beta-galactosidase;protein_id=YP_001035625.1;transl_table=11
NC_009009.1	RefSeq	gene	1685195	1686901	.	-	.	ID=gene1654;Dbxref=GeneID:4807293;Name=lacE;gbkey=Gene;gene=lacE;gene_biotype=protein_coding;locus_tag=SSA_1693
NC_009009.1	RefSeq	CDS	1685195	1686901	.	-	0	ID=cds1605;Parent=gene1654;Dbxref=Genbank:YP_001035626.1,GeneID:4807293;Name=YP_001035626.1;Note=GC: 45.28%25%3B Transporter classification TC:4.A.3.1.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.776. Curator(s): J. Alves;gbkey=CDS;gene=lacE;product=phosphotransferase system lactose-specific component IIBC;protein_id=YP_001035626.1;transl_table=11
NC_009009.1	RefSeq	gene	1686901	1687218	.	-	.	ID=gene1655;Dbxref=GeneID:4807175;Name=lacF;gbkey=Gene;gene=lacF;gene_biotype=protein_coding;locus_tag=SSA_1694
NC_009009.1	RefSeq	CDS	1686901	1687218	.	-	0	ID=cds1606;Parent=gene1655;Dbxref=Genbank:YP_001035627.1,GeneID:4807175;Name=YP_001035627.1;Note=GC: 44.34%25%3B Transporter classification TC:4.A.3.1.1. Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;gene=lacF;product=PTS system lactose-specific transporter subunit IIA;protein_id=YP_001035627.1;transl_table=11
NC_009009.1	RefSeq	gene	1687267	1688100	.	-	.	ID=gene1656;Dbxref=GeneID:4807850;Name=SSA_1695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1695
NC_009009.1	RefSeq	CDS	1687267	1688100	.	-	0	ID=cds1607;Parent=gene1656;Dbxref=Genbank:YP_001035628.1,GeneID:4807850;Name=YP_001035628.1;Note=GC: 43.29%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): J. Alves;gbkey=CDS;product=BglG family transcriptional antiterminator;protein_id=YP_001035628.1;transl_table=11
NC_009009.1	RefSeq	gene	1688297	1689277	.	-	.	ID=gene1657;Dbxref=GeneID:4808074;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=SSA_1696
NC_009009.1	RefSeq	CDS	1688297	1689277	.	-	0	ID=cds1608;Parent=gene1657;Dbxref=Genbank:YP_001035629.1,GeneID:4808074;Name=YP_001035629.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase%2C encoded by lacD1 and lacD2%3B expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources;gbkey=CDS;gene=lacD;product=tagatose 1%2C6-diphosphate aldolase;protein_id=YP_001035629.1;transl_table=11
NC_009009.1	RefSeq	gene	1689281	1690210	.	-	.	ID=gene1658;Dbxref=GeneID:4807340;Name=lacC;gbkey=Gene;gene=lacC;gene_biotype=protein_coding;locus_tag=SSA_1697
NC_009009.1	RefSeq	CDS	1689281	1690210	.	-	0	ID=cds1609;Parent=gene1658;Dbxref=Genbank:YP_001035630.1,GeneID:4807340;Name=YP_001035630.1;Note=catalyzes the formation of tagatose 1%2C6-bisphosphate from tagatose 6-phosphate and ATP;gbkey=CDS;gene=lacC;product=tagatose-6-phosphate kinase;protein_id=YP_001035630.1;transl_table=11
NC_009009.1	RefSeq	gene	1690223	1690738	.	-	.	ID=gene1659;Dbxref=GeneID:4808084;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=SSA_1698
NC_009009.1	RefSeq	CDS	1690223	1690738	.	-	0	ID=cds1610;Parent=gene1659;Dbxref=Genbank:YP_001035631.1,GeneID:4808084;Name=YP_001035631.1;Note=catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate;gbkey=CDS;gene=lacB;product=galactose-6-phosphate isomerase subunit LacB;protein_id=YP_001035631.1;transl_table=11
NC_009009.1	RefSeq	gene	1690755	1691186	.	-	.	ID=gene1660;Dbxref=GeneID:4807035;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=SSA_1699
NC_009009.1	RefSeq	CDS	1690755	1691186	.	-	0	ID=cds1611;Parent=gene1660;Dbxref=Genbank:YP_001035632.1,GeneID:4807035;Name=YP_001035632.1;Note=catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate%3B tagatose pathway for galactose utilization;gbkey=CDS;gene=lacA;product=galactose-6-phosphate isomerase subunit LacA;protein_id=YP_001035632.1;transl_table=11
NC_009009.1	RefSeq	gene	1691265	1691378	.	-	.	ID=gene1661;Dbxref=GeneID:4806859;Name=SSA_1700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1700
NC_009009.1	RefSeq	CDS	1691265	1691378	.	-	0	ID=cds1612;Parent=gene1661;Dbxref=Genbank:YP_001035633.1,GeneID:4806859;Name=YP_001035633.1;Note=GC: 17.54%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.757. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035633.1;transl_table=11
NC_009009.1	RefSeq	gene	1691389	1692144	.	-	.	ID=gene1662;Dbxref=GeneID:4807836;Name=lacR;gbkey=Gene;gene=lacR;gene_biotype=protein_coding;locus_tag=SSA_1701
NC_009009.1	RefSeq	CDS	1691389	1692144	.	-	0	ID=cds1613;Parent=gene1662;Dbxref=Genbank:YP_001035634.1,GeneID:4807836;Name=YP_001035634.1;Note=GC: 44.58%25%3B Codon Adaptation Index (CAI): 0.797. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=lacR;product=sugar metabolism transcriptional repressor;protein_id=YP_001035634.1;transl_table=11
NC_009009.1	RefSeq	gene	1692287	1693552	.	-	.	ID=gene1663;Dbxref=GeneID:4807443;Name=SSA_1702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1702
NC_009009.1	RefSeq	CDS	1692287	1693552	.	-	0	ID=cds1614;Parent=gene1663;Dbxref=Genbank:YP_001035635.1,GeneID:4807443;Name=YP_001035635.1;Note=GC: 32.7%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.779. SignalP prediction: Yes (prob. 0.577)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035635.1;transl_table=11
NC_009009.1	RefSeq	gene	1693730	1695730	.	-	.	ID=gene1664;Dbxref=GeneID:4807538;Name=metS;gbkey=Gene;gene=metS;gene_biotype=protein_coding;locus_tag=SSA_1703
NC_009009.1	RefSeq	CDS	1693730	1695730	.	-	0	ID=cds1615;Parent=gene1664;Dbxref=Genbank:YP_001035636.1,GeneID:4807538;Name=YP_001035636.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metS;product=methionyl-tRNA synthetase;protein_id=YP_001035636.1;transl_table=11
NC_009009.1	RefSeq	gene	1695859	1696491	.	-	.	ID=gene1665;Dbxref=GeneID:4807868;Name=SSA_1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1704
NC_009009.1	RefSeq	CDS	1695859	1696491	.	-	0	ID=cds1616;Parent=gene1665;Dbxref=Genbank:YP_001035637.1,GeneID:4807868;Name=YP_001035637.1;Note=GC: 43.13%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.751. Possibly membrane-spanning protein. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035637.1;transl_table=11
NC_009009.1	RefSeq	gene	1696488	1696943	.	-	.	ID=gene1666;Dbxref=GeneID:4807450;Name=SSA_1705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1705
NC_009009.1	RefSeq	CDS	1696488	1696943	.	-	0	ID=cds1617;Parent=gene1666;Dbxref=Genbank:YP_001035638.1,GeneID:4807450;Name=YP_001035638.1;Note=GC: 40.79%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.791. SignalP prediction: Yes (prob. 0.473).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035638.1;transl_table=11
NC_009009.1	RefSeq	gene	1696942	1697910	.	+	.	ID=gene1667;Dbxref=GeneID:4807484;Name=exoA;gbkey=Gene;gene=exoA;gene_biotype=protein_coding;locus_tag=SSA_1706
NC_009009.1	RefSeq	CDS	1696942	1697910	.	+	0	ID=cds1618;Parent=gene1667;Dbxref=Genbank:YP_001035639.1,GeneID:4807484;Name=YP_001035639.1;Note=GC: 45.2%25%3B Codon Adaptation Index (CAI): 0.754.;gbkey=CDS;gene=exoA;product=exodeoxyribonuclease;protein_id=YP_001035639.1;transl_table=11
NC_009009.1	RefSeq	gene	1697922	1698308	.	+	.	ID=gene1668;Dbxref=GeneID:4808003;Name=SSA_1707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1707
NC_009009.1	RefSeq	CDS	1697922	1698308	.	+	0	ID=cds1619;Parent=gene1668;Dbxref=Genbank:YP_001035640.1,GeneID:4808003;Name=YP_001035640.1;Note=GC: 43.15%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035640.1;transl_table=11
NC_009009.1	RefSeq	gene	1698284	1698409	.	-	.	ID=gene1669;Dbxref=GeneID:4808001;Name=SSA_1708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1708
NC_009009.1	RefSeq	CDS	1698284	1698409	.	-	0	ID=cds1620;Parent=gene1669;Dbxref=Genbank:YP_001035641.1,GeneID:4808001;Name=YP_001035641.1;Note=GC: 34.13%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.756.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035641.1;transl_table=11
NC_009009.1	RefSeq	gene	1698403	1698504	.	-	.	ID=gene1670;Dbxref=GeneID:4807460;Name=SSA_1709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1709
NC_009009.1	RefSeq	CDS	1698403	1698504	.	-	0	ID=cds1621;Parent=gene1670;Dbxref=Genbank:YP_001035642.1,GeneID:4807460;Name=YP_001035642.1;Note=GC: 31.37%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035642.1;transl_table=11
NC_009009.1	RefSeq	gene	1698478	1699071	.	+	.	ID=gene1671;Dbxref=GeneID:4807976;Name=SSA_1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1710
NC_009009.1	RefSeq	CDS	1698478	1699071	.	+	0	ID=cds1622;Parent=gene1671;Dbxref=Genbank:YP_001035643.1,GeneID:4807976;Name=YP_001035643.1;Note=GC: 39.56%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.788. Curator(s): J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001035643.1;transl_table=11
NC_009009.1	RefSeq	gene	1699097	1699726	.	-	.	ID=gene1672;Dbxref=GeneID:4807716;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=SSA_1711
NC_009009.1	RefSeq	CDS	1699097	1699726	.	-	0	ID=cds1623;Parent=gene1672;Dbxref=Genbank:YP_001035644.1,GeneID:4807716;Name=YP_001035644.1;Note=GC: 47.94%25%3B Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;gene=nth;product=endonuclease III;protein_id=YP_001035644.1;transl_table=11
NC_009009.1	RefSeq	gene	1699821	1700174	.	-	.	ID=gene1673;Dbxref=GeneID:4807473;Name=SSA_1712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1712
NC_009009.1	RefSeq	CDS	1699821	1700174	.	-	0	ID=cds1624;Parent=gene1673;Dbxref=Genbank:YP_001035645.1,GeneID:4807473;Name=YP_001035645.1;Note=GC: 44.63%25%3B Codon Adaptation Index (CAI): 0.754. Curator(s): J. Alves;gbkey=CDS;product=arsenate reductase;protein_id=YP_001035645.1;transl_table=11
NC_009009.1	RefSeq	gene	1700299	1701474	.	-	.	ID=gene1674;Dbxref=GeneID:4805872;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=SSA_1713
NC_009009.1	RefSeq	CDS	1700299	1701474	.	-	0	ID=cds1625;Parent=gene1674;Dbxref=Genbank:YP_001035646.1,GeneID:4805872;Name=YP_001035646.1;Note=GC: 46.26%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;gene=serA;product=D-3-phosphoglycerate dehydrogenase;protein_id=YP_001035646.1;transl_table=11
NC_009009.1	RefSeq	gene	1701487	1702578	.	-	.	ID=gene1675;Dbxref=GeneID:4806915;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=SSA_1715
NC_009009.1	RefSeq	CDS	1701487	1702578	.	-	0	ID=cds1626;Parent=gene1675;Dbxref=Genbank:YP_001035647.1,GeneID:4806915;Name=YP_001035647.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;gene=serC;product=phosphoserine aminotransferase;protein_id=YP_001035647.1;transl_table=11
NC_009009.1	RefSeq	gene	1702780	1703706	.	-	.	ID=gene1676;Dbxref=GeneID:4806717;Name=SSA_1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1716
NC_009009.1	RefSeq	CDS	1702780	1703706	.	-	0	ID=cds1627;Parent=gene1676;Dbxref=REBASE:SsaSKORF1717P,Genbank:YP_001035648.1,GeneID:4806717;Name=YP_001035648.1;Note=GC: 35.49%25%3B Codon Adaptation Index (CAI): 0.805.;gbkey=CDS;product=restriction endonuclease SsuRB;protein_id=YP_001035648.1;transl_table=11
NC_009009.1	RefSeq	gene	1704245	1705048	.	-	.	ID=gene1677;Dbxref=GeneID:4806268;Name=spnIM;gbkey=Gene;gene=spnIM;gene_biotype=protein_coding;locus_tag=SSA_1717
NC_009009.1	RefSeq	CDS	1704245	1705048	.	-	0	ID=cds1628;Parent=gene1677;Dbxref=Genbank:YP_001035649.1,GeneID:4806268;Name=YP_001035649.1;Note=GC: 37.19%25%3B Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;gene=spnIM;product=modification methylase DpnIIB;protein_id=YP_001035649.1;transl_table=11
NC_009009.1	RefSeq	gene	1705041	1705901	.	-	.	ID=gene1678;Dbxref=GeneID:4807799;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=SSA_1718
NC_009009.1	RefSeq	CDS	1705041	1705901	.	-	0	ID=cds1629;Parent=gene1678;Dbxref=Genbank:YP_001035650.1,GeneID:4807799;Name=YP_001035650.1;Note=GC: 37.28%25%3B Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;gene=dam;product=site-specific DNA-methyltransferase;protein_id=YP_001035650.1;transl_table=11
NC_009009.1	RefSeq	gene	1706014	1706883	.	-	.	ID=gene1679;Dbxref=GeneID:4806238;Name=SSA_1719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1719
NC_009009.1	RefSeq	CDS	1706014	1706883	.	-	0	ID=cds1630;Parent=gene1679;Dbxref=Genbank:YP_001035651.1,GeneID:4806238;Name=YP_001035651.1;Note=GC: 46.44%25%3B Codon Adaptation Index (CAI): 0.769. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035651.1;transl_table=11
NC_009009.1	RefSeq	gene	1706886	1707203	.	-	.	ID=gene1680;Dbxref=GeneID:4806229;Name=SSA_1720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1720
NC_009009.1	RefSeq	CDS	1706886	1707203	.	-	0	ID=cds1631;Parent=gene1680;Dbxref=Genbank:YP_001035652.1,GeneID:4806229;Name=YP_001035652.1;Note=in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation%3B interacts with DnaN and DnaA;gbkey=CDS;product=DNA replication intiation control protein YabA;protein_id=YP_001035652.1;transl_table=11
NC_009009.1	RefSeq	gene	1707228	1708118	.	-	.	ID=gene1681;Dbxref=GeneID:4806691;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=SSA_1721
NC_009009.1	RefSeq	CDS	1707228	1708118	.	-	0	ID=cds1632;Parent=gene1681;Dbxref=Genbank:YP_001035653.1,GeneID:4806691;Name=YP_001035653.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA.;gbkey=CDS;gene=holB;product=DNA polymerase III subunit delta';protein_id=YP_001035653.1;transl_table=11
NC_009009.1	RefSeq	gene	1708115	1708753	.	-	.	ID=gene1682;Dbxref=GeneID:4805992;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=SSA_1722
NC_009009.1	RefSeq	CDS	1708115	1708753	.	-	0	ID=cds1633;Parent=gene1682;Dbxref=Genbank:YP_001035654.1,GeneID:4805992;Name=YP_001035654.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=YP_001035654.1;transl_table=11
NC_009009.1	RefSeq	gene	1709066	1709953	.	+	.	ID=gene1683;Dbxref=GeneID:4806403;Name=SSA_1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1723
NC_009009.1	RefSeq	CDS	1709066	1709953	.	+	0	ID=cds1634;Parent=gene1683;Dbxref=Genbank:YP_001035655.1,GeneID:4806403;Name=YP_001035655.1;Note=GC: 43.47%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035655.1;transl_table=11
NC_009009.1	RefSeq	gene	1709987	1710643	.	-	.	ID=gene1684;Dbxref=GeneID:4806203;Name=SSA_1724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1724
NC_009009.1	RefSeq	CDS	1709987	1710643	.	-	0	ID=cds1635;Parent=gene1684;Dbxref=Genbank:YP_001035656.1,GeneID:4806203;Name=YP_001035656.1;Note=GC: 43.53%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035656.1;transl_table=11
NC_009009.1	RefSeq	gene	1711083	1711793	.	-	.	ID=gene1685;Dbxref=GeneID:4806303;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=SSA_1725
NC_009009.1	RefSeq	CDS	1711083	1711793	.	-	0	ID=cds1636;Parent=gene1685;Dbxref=Genbank:YP_001035657.1,GeneID:4806303;Name=YP_001035657.1;Note=GC: 45.85%25%3B Transporter classification TC:3.A.1.4.1. Codon Adaptation Index (CAI): 0.817.;gbkey=CDS;gene=livF;product=branched chain amino acid ABC transporter ATP-binding protein;protein_id=YP_001035657.1;transl_table=11
NC_009009.1	RefSeq	gene	1711793	1712557	.	-	.	ID=gene1686;Dbxref=GeneID:4805771;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=SSA_1726
NC_009009.1	RefSeq	CDS	1711793	1712557	.	-	0	ID=cds1637;Parent=gene1686;Dbxref=Genbank:YP_001035658.1,GeneID:4805771;Name=YP_001035658.1;Note=GC: 45.75%25%3B Transporter classification TC:3.A.1.4.1. Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;gene=livG;product=branched chain amino acid ABC transporter ATP-binding protein;protein_id=YP_001035658.1;transl_table=11
NC_009009.1	RefSeq	gene	1712557	1713510	.	-	.	ID=gene1687;Dbxref=GeneID:4805835;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=SSA_1727
NC_009009.1	RefSeq	CDS	1712557	1713510	.	-	0	ID=cds1638;Parent=gene1687;Dbxref=Genbank:YP_001035659.1,GeneID:4805835;Name=YP_001035659.1;Note=GC: 43.92%25%3B Transporter classification TC:3.A.1.4.1. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.784. SignalP prediction: Yes (prob. 0.998).;gbkey=CDS;gene=livM;product=branched-chain amino acid ABC transporter permease;protein_id=YP_001035659.1;transl_table=11
NC_009009.1	RefSeq	gene	1713514	1714383	.	-	.	ID=gene1688;Dbxref=GeneID:4806547;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=SSA_1728
NC_009009.1	RefSeq	CDS	1713514	1714383	.	-	0	ID=cds1639;Parent=gene1688;Dbxref=Genbank:YP_001035660.1,GeneID:4806547;Name=YP_001035660.1;Note=GC: 43.91%25%3B Transporter classification TC:3.A.1.4.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;gene=livH;product=branched-chain amino acid ABC transporter permease;protein_id=YP_001035660.1;transl_table=11
NC_009009.1	RefSeq	gene	1714629	1715789	.	-	.	ID=gene1689;Dbxref=GeneID:4806336;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=SSA_1729
NC_009009.1	RefSeq	CDS	1714629	1715789	.	-	0	ID=cds1640;Parent=gene1689;Dbxref=Genbank:YP_001035661.1,GeneID:4806336;Name=YP_001035661.1;Note=GC: 41.52%25%3B Transporter classification TC:3.A.1.4.1. Codon Adaptation Index (CAI): 0.807. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=livJ;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=YP_001035661.1;transl_table=11
NC_009009.1	RefSeq	gene	1715878	1716147	.	-	.	ID=gene1690;Dbxref=GeneID:4806540;Name=SSA_1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1730
NC_009009.1	RefSeq	CDS	1715878	1716147	.	-	0	ID=cds1641;Parent=gene1690;Dbxref=Genbank:YP_001035662.1,GeneID:4806540;Name=YP_001035662.1;Note=GC: 39.26%25%3B Codon Adaptation Index (CAI): 0.755.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035662.1;transl_table=11
NC_009009.1	RefSeq	gene	1716308	1716898	.	-	.	ID=gene1691;Dbxref=GeneID:4806039;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=SSA_1731
NC_009009.1	RefSeq	CDS	1716308	1716898	.	-	0	ID=cds1642;Parent=gene1691;Dbxref=Genbank:YP_001035663.1,GeneID:4806039;Name=YP_001035663.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_001035663.1;transl_table=11
NC_009009.1	RefSeq	gene	1717006	1717635	.	-	.	ID=gene1692;Dbxref=GeneID:4806037;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SSA_1732
NC_009009.1	RefSeq	CDS	1717006	1717635	.	-	0	ID=cds1643;Parent=gene1692;Dbxref=Genbank:YP_001035664.1,GeneID:4806037;Name=YP_001035664.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=YP_001035664.1;transl_table=11
NC_009009.1	RefSeq	gene	1717634	1717738	.	+	.	ID=gene1693;Dbxref=GeneID:4805846;Name=SSA_1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1733
NC_009009.1	RefSeq	CDS	1717634	1717738	.	+	0	ID=cds1644;Parent=gene1693;Dbxref=Genbank:YP_001035665.1,GeneID:4805846;Name=YP_001035665.1;Note=GC: 29.52%25%3B Codon Adaptation Index (CAI): 0.739.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035665.1;transl_table=11
NC_009009.1	RefSeq	gene	1717733	1720393	.	-	.	ID=gene1694;Dbxref=GeneID:4805982;Name=SSA_1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1734
NC_009009.1	RefSeq	CDS	1717733	1720393	.	-	0	ID=cds1645;Parent=gene1694;Dbxref=Genbank:YP_001035666.1,GeneID:4805982;Name=YP_001035666.1;Note=GC: 45.02%25%3B Transporter classification TC:3.A.3.4.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;product=cation (Mg/Ni uptake) transport ATPase;protein_id=YP_001035666.1;transl_table=11
NC_009009.1	RefSeq	gene	1720551	1721162	.	-	.	ID=gene1695;Dbxref=GeneID:4805897;Name=SSA_1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1735
NC_009009.1	RefSeq	CDS	1720551	1721162	.	-	0	ID=cds1646;Parent=gene1695;Dbxref=Genbank:YP_001035667.1,GeneID:4805897;Name=YP_001035667.1;Note=GC: 35.78%25%3B Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;product=UreX;protein_id=YP_001035667.1;transl_table=11
NC_009009.1	RefSeq	gene	1721543	1722709	.	-	.	ID=gene1696;Dbxref=GeneID:4806482;Name=SSA_1736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1736
NC_009009.1	RefSeq	CDS	1721543	1722709	.	-	0	ID=cds1647;Parent=gene1696;Dbxref=Genbank:YP_001035668.1,GeneID:4806482;Name=YP_001035668.1;Note=GC: 45.5%25%3B Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;product=L-cysteine desulfhydrase;protein_id=YP_001035668.1;transl_table=11
NC_009009.1	RefSeq	gene	1722711	1723868	.	-	.	ID=gene1697;Dbxref=GeneID:4806122;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=SSA_1737
NC_009009.1	RefSeq	CDS	1722711	1723868	.	-	0	ID=cds1648;Parent=gene1697;Dbxref=Genbank:YP_001035669.1,GeneID:4806122;Name=YP_001035669.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;gene=metB;product=cystathionine gamma-synthase;protein_id=YP_001035669.1;transl_table=11
NC_009009.1	RefSeq	gene	1723965	1725593	.	-	.	ID=gene1698;Dbxref=GeneID:4805781;Name=SSA_1738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1738
NC_009009.1	RefSeq	CDS	1723965	1725593	.	-	0	ID=cds1649;Parent=gene1698;Dbxref=Genbank:YP_001035670.1,GeneID:4805781;Name=YP_001035670.1;Note=GC: 45.86%25%3B Transmembrane domains: 14. Codon Adaptation Index (CAI): 0.784.;gbkey=CDS;product=polysaccharide biosynthesis protein;protein_id=YP_001035670.1;transl_table=11
NC_009009.1	RefSeq	gene	1725680	1727125	.	+	.	ID=gene1699;Dbxref=GeneID:4805785;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SSA_1739
NC_009009.1	RefSeq	CDS	1725680	1727125	.	+	0	ID=cds1650;Parent=gene1699;Dbxref=Genbank:YP_001035671.1,GeneID:4805785;Name=YP_001035671.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase;protein_id=YP_001035671.1;transl_table=11
NC_009009.1	RefSeq	gene	1727171	1727956	.	-	.	ID=gene1700;Dbxref=GeneID:4806441;Name=SSA_1740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1740
NC_009009.1	RefSeq	CDS	1727171	1727956	.	-	0	ID=cds1651;Parent=gene1700;Dbxref=Genbank:YP_001035672.1,GeneID:4806441;Name=YP_001035672.1;Note=GC: 44.4%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.769.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035672.1;transl_table=11
NC_009009.1	RefSeq	gene	1728147	1728932	.	+	.	ID=gene1701;Dbxref=GeneID:4808068;Name=SSA_1741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1741
NC_009009.1	RefSeq	CDS	1728147	1728932	.	+	0	ID=cds1652;Parent=gene1701;Dbxref=Genbank:YP_001035673.1,GeneID:4808068;Name=YP_001035673.1;Note=GC: 48.73%25%3B Transporter classification TC:3.A.1.14.7. Codon Adaptation Index (CAI): 0.783. Curator(s): J. Alves;gbkey=CDS;product=Fe3+-siderophores ABC transporter ATPase;protein_id=YP_001035673.1;transl_table=11
NC_009009.1	RefSeq	gene	1729012	1729947	.	+	.	ID=gene1702;Dbxref=GeneID:4805956;Name=SSA_1742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1742
NC_009009.1	RefSeq	CDS	1729012	1729947	.	+	0	ID=cds1653;Parent=gene1702;Dbxref=Genbank:YP_001035674.1,GeneID:4805956;Name=YP_001035674.1;Note=GC: 40.81%25%3B Transporter classification TC:3.A.1.14.7. Codon Adaptation Index (CAI): 0.778. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=ferrichrome-binding protein;protein_id=YP_001035674.1;transl_table=11
NC_009009.1	RefSeq	gene	1730310	1731065	.	+	.	ID=gene1703;Dbxref=GeneID:4805994;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=SSA_1743
NC_009009.1	RefSeq	CDS	1730310	1731065	.	+	0	ID=cds1654;Parent=gene1703;Dbxref=Genbank:YP_001035675.1,GeneID:4805994;Name=YP_001035675.1;Note=GC: 47.75%25%3B Transporter classification TC:3.A.1.14.7. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.719.;gbkey=CDS;gene=fhuB;product=Fe3+-siderophore ABC transporter permease;protein_id=YP_001035675.1;transl_table=11
NC_009009.1	RefSeq	gene	1731055	1732059	.	+	.	ID=gene1704;Dbxref=GeneID:4805905;Name=SSA_1744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1744
NC_009009.1	RefSeq	CDS	1731055	1732059	.	+	0	ID=cds1655;Parent=gene1704;Dbxref=Genbank:YP_001035676.1,GeneID:4805905;Name=YP_001035676.1;Note=GC: 46.67%25%3B Transporter classification TC:3.A.1.14.5. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.736. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=iron ABC transporter permease;protein_id=YP_001035676.1;transl_table=11
NC_009009.1	RefSeq	gene	1732087	1732281	.	-	.	ID=gene1705;Dbxref=GeneID:4806620;Name=csbD;gbkey=Gene;gene=csbD;gene_biotype=protein_coding;locus_tag=SSA_1745
NC_009009.1	RefSeq	CDS	1732087	1732281	.	-	0	ID=cds1656;Parent=gene1705;Dbxref=Genbank:YP_001035677.1,GeneID:4806620;Name=YP_001035677.1;Note=GC: 39.49%25%3B Codon Adaptation Index (CAI): 0.856. Curator(s): J. Alves;gbkey=CDS;gene=csbD;product=general stress response protein CsbD;protein_id=YP_001035677.1;transl_table=11
NC_009009.1	RefSeq	gene	1732382	1733035	.	-	.	ID=gene1706;Dbxref=GeneID:4805894;Name=SSA_1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1746
NC_009009.1	RefSeq	CDS	1732382	1733035	.	-	0	ID=cds1657;Parent=gene1706;Dbxref=Genbank:YP_001035678.1,GeneID:4805894;Name=YP_001035678.1;Note=GC: 45.72%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035678.1;transl_table=11
NC_009009.1	RefSeq	gene	1733028	1733540	.	-	.	ID=gene1707;Dbxref=GeneID:4807996;Name=SSA_1747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1747
NC_009009.1	RefSeq	CDS	1733028	1733540	.	-	0	ID=cds1658;Parent=gene1707;Dbxref=Genbank:YP_001035679.1,GeneID:4807996;Name=YP_001035679.1;Note=GC: 41.33%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035679.1;transl_table=11
NC_009009.1	RefSeq	gene	1733633	1734568	.	-	.	ID=gene1708;Dbxref=GeneID:4807325;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=SSA_1748
NC_009009.1	RefSeq	CDS	1733633	1734568	.	-	0	ID=cds1659;Parent=gene1708;Dbxref=Genbank:YP_001035680.1,GeneID:4807325;Name=YP_001035680.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;gene=ppx;product=manganese-dependent inorganic pyrophosphatase;protein_id=YP_001035680.1;transl_table=11
NC_009009.1	RefSeq	gene	1734707	1735516	.	-	.	ID=gene1709;Dbxref=GeneID:4807186;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SSA_1749
NC_009009.1	RefSeq	CDS	1734707	1735516	.	-	0	ID=cds1660;Parent=gene1709;Dbxref=Genbank:YP_001035681.1,GeneID:4807186;Name=YP_001035681.1;Note=GC: 45.93%25%3B Codon Adaptation Index (CAI): 0.818.;gbkey=CDS;gene=pflA;product=pyruvate formate-lyase-activating enzyme;protein_id=YP_001035681.1;transl_table=11
NC_009009.1	RefSeq	gene	1735763	1738012	.	-	.	ID=gene1710;Dbxref=GeneID:4807604;Name=SSA_1750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1750
NC_009009.1	RefSeq	CDS	1735763	1738012	.	-	0	ID=cds1661;Parent=gene1710;Dbxref=Genbank:YP_001035682.1,GeneID:4807604;Name=YP_001035682.1;Note=GC: 46.58%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.775. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;product=extracellular nuclease;protein_id=YP_001035682.1;transl_table=11
NC_009009.1	RefSeq	gene	1738200	1739891	.	-	.	ID=gene1711;Dbxref=GeneID:4806522;Name=dexS;gbkey=Gene;gene=dexS;gene_biotype=protein_coding;locus_tag=SSA_1751
NC_009009.1	RefSeq	CDS	1738200	1739891	.	-	0	ID=cds1662;Parent=gene1711;Dbxref=Genbank:YP_001035683.1,GeneID:4806522;Name=YP_001035683.1;Note=GC: 45.8%25%3B Codon Adaptation Index (CAI): 0.78. Curator(s): J. Alves;gbkey=CDS;gene=dexS;product=dextran glucosidase;protein_id=YP_001035683.1;transl_table=11
NC_009009.1	RefSeq	gene	1739902	1741965	.	-	.	ID=gene1712;Dbxref=GeneID:4807096;Name=SSA_1752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1752
NC_009009.1	RefSeq	CDS	1739902	1741965	.	-	0	ID=cds1663;Parent=gene1712;Dbxref=Genbank:YP_001035684.1,GeneID:4807096;Name=YP_001035684.1;Note=GC: 44.53%25%3B Transporter classification TC:4.A.1.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=phosphotransferase system%2C trehalose-specific IIBC component;protein_id=YP_001035684.1;transl_table=11
NC_009009.1	RefSeq	gene	1742084	1742800	.	+	.	ID=gene1713;Dbxref=GeneID:4806565;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=SSA_1753
NC_009009.1	RefSeq	CDS	1742084	1742800	.	+	0	ID=cds1664;Parent=gene1713;Dbxref=Genbank:YP_001035685.1,GeneID:4806565;Name=YP_001035685.1;Note=GC: 44.91%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): J. Alves;gbkey=CDS;gene=treR;product=GntR family transcriptional regulator;protein_id=YP_001035685.1;transl_table=11
NC_009009.1	RefSeq	gene	1743215	1743568	.	-	.	ID=gene1714;Dbxref=GeneID:4806284;Name=SSA_1754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1754
NC_009009.1	RefSeq	CDS	1743215	1743568	.	-	0	ID=cds1665;Parent=gene1714;Dbxref=Genbank:YP_001035686.1,GeneID:4806284;Name=YP_001035686.1;Note=GC: 33.62%25%3B Codon Adaptation Index (CAI): 0.711.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035686.1;transl_table=11
NC_009009.1	RefSeq	gene	1743565	1743858	.	-	.	ID=gene1715;Dbxref=GeneID:4805965;Name=SSA_1755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1755
NC_009009.1	RefSeq	CDS	1743565	1743858	.	-	0	ID=cds1666;Parent=gene1715;Dbxref=Genbank:YP_001035687.1,GeneID:4805965;Name=YP_001035687.1;Note=GC: 39.12%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035687.1;transl_table=11
NC_009009.1	RefSeq	gene	1743867	1745381	.	-	.	ID=gene1716;Dbxref=GeneID:4805993;Name=SSA_1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1756
NC_009009.1	RefSeq	CDS	1743867	1745381	.	-	0	ID=cds1667;Parent=gene1716;Dbxref=Genbank:YP_001035688.1,GeneID:4805993;Name=YP_001035688.1;Note=GC: 41.58%25%3B Codon Adaptation Index (CAI): 0.773. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035688.1;transl_table=11
NC_009009.1	RefSeq	gene	1745372	1745980	.	-	.	ID=gene1717;Dbxref=GeneID:4806610;Name=SSA_1757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1757
NC_009009.1	RefSeq	CDS	1745372	1745980	.	-	0	ID=cds1668;Parent=gene1717;Dbxref=Genbank:YP_001035689.1,GeneID:4806610;Name=YP_001035689.1;Note=GC: 38.59%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.76. SignalP prediction: Yes (prob. 0.671)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035689.1;transl_table=11
NC_009009.1	RefSeq	gene	1746101	1746709	.	-	.	ID=gene1718;Dbxref=GeneID:4806763;Name=SSA_1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1758
NC_009009.1	RefSeq	CDS	1746101	1746709	.	-	0	ID=cds1669;Parent=gene1718;Dbxref=Genbank:YP_001035690.1,GeneID:4806763;Name=YP_001035690.1;Note=GC: 33.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.768. SignalP prediction: Yes (prob. 0.48).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035690.1;transl_table=11
NC_009009.1	RefSeq	gene	1746754	1747059	.	-	.	ID=gene1719;Dbxref=GeneID:4807636;Name=SSA_1759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1759
NC_009009.1	RefSeq	CDS	1746754	1747059	.	-	0	ID=cds1670;Parent=gene1719;Dbxref=Genbank:YP_001035691.1,GeneID:4807636;Name=YP_001035691.1;Note=GC: 33.33%25%3B Codon Adaptation Index (CAI): 0.832.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035691.1;transl_table=11
NC_009009.1	RefSeq	gene	1747216	1747374	.	-	.	ID=gene1720;Dbxref=GeneID:4808083;Name=SSA_1760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1760
NC_009009.1	RefSeq	CDS	1747216	1747374	.	-	0	ID=cds1671;Parent=gene1720;Dbxref=Genbank:YP_001035692.1,GeneID:4808083;Name=YP_001035692.1;Note=GC: 35.22%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.77. SignalP prediction: Yes (prob. 0.466)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035692.1;transl_table=11
NC_009009.1	RefSeq	gene	1747527	1748867	.	-	.	ID=gene1721;Dbxref=GeneID:4806791;Name=hlyX;gbkey=Gene;gene=hlyX;gene_biotype=protein_coding;locus_tag=SSA_1761
NC_009009.1	RefSeq	CDS	1747527	1748867	.	-	0	ID=cds1672;Parent=gene1721;Dbxref=Genbank:YP_001035693.1,GeneID:4806791;Name=YP_001035693.1;Note=GC: 44.3%25%3B Transporter classification TC:9.B.37.2.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.778. SignalP prediction: Yes (prob. 0.52)%3B Curator(s): J. Alves;gbkey=CDS;gene=hlyX;product=hemolysin;protein_id=YP_001035693.1;transl_table=11
NC_009009.1	RefSeq	gene	1749018	1750142	.	-	.	ID=gene1722;Dbxref=GeneID:4806517;Name=SSA_1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1762
NC_009009.1	RefSeq	CDS	1749018	1750142	.	-	0	ID=cds1673;Parent=gene1722;Dbxref=Genbank:YP_001035694.1,GeneID:4806517;Name=YP_001035694.1;Note=GC: 42.76%25%3B Transporter classification TC:9.B.22.1.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves;gbkey=CDS;product=permease;protein_id=YP_001035694.1;transl_table=11
NC_009009.1	RefSeq	gene	1750217	1751011	.	+	.	ID=gene1723;Dbxref=GeneID:4807808;Name=SSA_1763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1763
NC_009009.1	RefSeq	CDS	1750217	1751011	.	+	0	ID=cds1674;Parent=gene1723;Dbxref=Genbank:YP_001035695.1,GeneID:4807808;Name=YP_001035695.1;Note=GC: 48.81%25%3B Transporter classification TC:3.A.1.14.3. Codon Adaptation Index (CAI): 0.773. Curator(s): J. Alves;gbkey=CDS;product=molybdenum ABC transporter ATPase;protein_id=YP_001035695.1;transl_table=11
NC_009009.1	RefSeq	gene	1751008	1752570	.	+	.	ID=gene1724;Dbxref=GeneID:4807525;Name=SSA_1764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1764
NC_009009.1	RefSeq	CDS	1751008	1752570	.	+	0	ID=cds1675;Parent=gene1724;Dbxref=Genbank:YP_001035696.1,GeneID:4807525;Name=YP_001035696.1;Note=GC: 45.87%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.712).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035696.1;transl_table=11
NC_009009.1	RefSeq	gene	1752682	1753056	.	+	.	ID=gene1725;Dbxref=GeneID:4807308;Name=SSA_2385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2385
NC_009009.1	RefSeq	CDS	1752682	1753056	.	+	0	ID=cds1676;Parent=gene1725;Dbxref=Genbank:YP_001035697.1,GeneID:4807308;Name=YP_001035697.1;Note=GC: 35.2%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.725. SignalP prediction: Yes (prob. 0.874)%3B Weak similarity to partial Mg/Co/Ni transporter domain. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035697.1;transl_table=11
NC_009009.1	RefSeq	gene	1753176	1753940	.	+	.	ID=gene1726;Dbxref=GeneID:4806062;Name=SSA_1765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1765
NC_009009.1	RefSeq	CDS	1753176	1753940	.	+	0	ID=cds1677;Parent=gene1726;Dbxref=Genbank:YP_001035698.1,GeneID:4806062;Name=YP_001035698.1;Note=GC: 30.98%25%3B Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035698.1;transl_table=11
NC_009009.1	RefSeq	gene	1754478	1755221	.	-	.	ID=gene1727;Dbxref=GeneID:4806990;Name=SSA_1766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1766
NC_009009.1	RefSeq	CDS	1754478	1755221	.	-	0	ID=cds1678;Parent=gene1727;Dbxref=Genbank:YP_001035699.1,GeneID:4806990;Name=YP_001035699.1;Note=GC: 36.42%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;product=bacitracin ABC transporter permease;protein_id=YP_001035699.1;transl_table=11
NC_009009.1	RefSeq	gene	1755240	1756193	.	-	.	ID=gene1728;Dbxref=GeneID:4807383;Name=SSA_1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1767
NC_009009.1	RefSeq	CDS	1755240	1756193	.	-	0	ID=cds1679;Parent=gene1728;Dbxref=Genbank:YP_001035700.1,GeneID:4807383;Name=YP_001035700.1;Note=GC: 32.18%25%3B Transporter classification TC:3.A.1.124.2. Codon Adaptation Index (CAI): 0.743.;gbkey=CDS;product=bacitracin ABC transporter ATP-binding protein;protein_id=YP_001035700.1;transl_table=11
NC_009009.1	RefSeq	gene	1756193	1756789	.	-	.	ID=gene1729;Dbxref=GeneID:4807203;Name=SSA_1768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1768
NC_009009.1	RefSeq	CDS	1756193	1756789	.	-	0	ID=cds1680;Parent=gene1729;Dbxref=Genbank:YP_001035701.1,GeneID:4807203;Name=YP_001035701.1;Note=GC: 32.5%25%3B Codon Adaptation Index (CAI): 0.76. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001035701.1;transl_table=11
NC_009009.1	RefSeq	gene	1757029	1757580	.	-	.	ID=gene1730;Dbxref=GeneID:4807063;Name=SSA_1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1769
NC_009009.1	RefSeq	CDS	1757029	1757580	.	-	0	ID=cds1681;Parent=gene1730;Dbxref=Genbank:YP_001035702.1,GeneID:4807063;Name=YP_001035702.1;Note=GC: 50%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035702.1;transl_table=11
NC_009009.1	RefSeq	gene	1757574	1758521	.	-	.	ID=gene1731;Dbxref=GeneID:4806881;Name=SSA_1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1770
NC_009009.1	RefSeq	CDS	1757574	1758521	.	-	0	ID=cds1682;Parent=gene1731;Dbxref=Genbank:YP_001035703.1,GeneID:4806881;Name=YP_001035703.1;Note=GC: 49.16%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035703.1;transl_table=11
NC_009009.1	RefSeq	gene	1758581	1758889	.	-	.	ID=gene1732;Dbxref=GeneID:4807260;Name=SSA_1771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1771
NC_009009.1	RefSeq	CDS	1758581	1758889	.	-	0	ID=cds1683;Parent=gene1732;Dbxref=Genbank:YP_001035704.1,GeneID:4807260;Name=YP_001035704.1;Note=GC: 51.13%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=DNA methyltransferase protein;protein_id=YP_001035704.1;transl_table=11
NC_009009.1	RefSeq	gene	1758985	1759635	.	-	.	ID=gene1733;Dbxref=GeneID:4808081;Name=SSA_1772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1772
NC_009009.1	RefSeq	CDS	1758985	1759635	.	-	0	ID=cds1684;Parent=gene1733;Dbxref=Genbank:YP_001035705.1,GeneID:4808081;Name=YP_001035705.1;Note=GC: 45.16%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035705.1;transl_table=11
NC_009009.1	RefSeq	gene	1759625	1760182	.	-	.	ID=gene1734;Dbxref=GeneID:4808075;Name=SSA_1773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1773
NC_009009.1	RefSeq	CDS	1759625	1760182	.	-	0	ID=cds1685;Parent=gene1734;Dbxref=Genbank:YP_001035706.1,GeneID:4808075;Name=YP_001035706.1;Note=GC: 37.99%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.721. SignalP prediction: Yes (prob. 0.564).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035706.1;transl_table=11
NC_009009.1	RefSeq	gene	1760579	1761133	.	-	.	ID=gene1735;Dbxref=GeneID:4807402;Name=cspR;gbkey=Gene;gene=cspR;gene_biotype=protein_coding;locus_tag=SSA_1774
NC_009009.1	RefSeq	CDS	1760579	1761133	.	-	0	ID=cds1686;Parent=gene1735;Dbxref=Genbank:YP_001035707.1,GeneID:4807402;Name=YP_001035707.1;Note=GC: 42.7%25%3B Codon Adaptation Index (CAI): 0.802.;gbkey=CDS;gene=cspR;product=rRNA methylase;protein_id=YP_001035707.1;transl_table=11
NC_009009.1	RefSeq	gene	1761424	1762773	.	+	.	ID=gene1736;Dbxref=GeneID:4808070;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=SSA_1775
NC_009009.1	RefSeq	CDS	1761424	1762773	.	+	0	ID=cds1687;Parent=gene1736;Dbxref=Genbank:YP_001035708.1,GeneID:4808070;Name=YP_001035708.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=YP_001035708.1;transl_table=11
NC_009009.1	RefSeq	gene	1762779	1764218	.	+	.	ID=gene1737;Dbxref=GeneID:4806863;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=SSA_1776
NC_009009.1	RefSeq	CDS	1762779	1764218	.	+	0	ID=cds1688;Parent=gene1737;Dbxref=Genbank:YP_001035709.1,GeneID:4806863;Name=YP_001035709.1;Note=GC: 47.29%25%3B Transporter classification TC:2.A.38.1.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.732.;gbkey=CDS;gene=trkH;product=Trk family potassium uptake protein;protein_id=YP_001035709.1;transl_table=11
NC_009009.1	RefSeq	gene	1764517	1765245	.	-	.	ID=gene1738;Dbxref=GeneID:4806864;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=SSA_1777
NC_009009.1	RefSeq	CDS	1764517	1765245	.	-	0	ID=cds1689;Parent=gene1738;Dbxref=Genbank:YP_001035710.1,GeneID:4806864;Name=YP_001035710.1;Note=GC: 49.93%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;gene=rluB;product=ribosomal large subunit pseudouridine synthase B;protein_id=YP_001035710.1;transl_table=11
NC_009009.1	RefSeq	gene	1765232	1765801	.	-	.	ID=gene1739;Dbxref=GeneID:4808073;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=SSA_1778
NC_009009.1	RefSeq	CDS	1765232	1765801	.	-	0	ID=cds1690;Parent=gene1739;Dbxref=Genbank:YP_001035711.1,GeneID:4808073;Name=YP_001035711.1;Note=functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpA%3B forms a homodimer;gbkey=CDS;gene=scpB;product=segregation and condensation protein B;protein_id=YP_001035711.1;transl_table=11
NC_009009.1	RefSeq	gene	1765794	1766504	.	-	.	ID=gene1740;Dbxref=GeneID:4806857;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=SSA_1779
NC_009009.1	RefSeq	CDS	1765794	1766504	.	-	0	ID=cds1691;Parent=gene1740;Dbxref=Genbank:YP_001035712.1,GeneID:4806857;Name=YP_001035712.1;Note=functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpB;gbkey=CDS;gene=scpA;product=segregation and condensation protein A;protein_id=YP_001035712.1;transl_table=11
NC_009009.1	RefSeq	gene	1766506	1767237	.	-	.	ID=gene1741;Dbxref=GeneID:4808072;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SSA_1780
NC_009009.1	RefSeq	CDS	1766506	1767237	.	-	0	ID=cds1692;Parent=gene1741;Dbxref=Genbank:YP_001035713.1,GeneID:4808072;Name=YP_001035713.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=site-specific tyrosine recombinase XerD;protein_id=YP_001035713.1;transl_table=11
NC_009009.1	RefSeq	gene	1767234	1767695	.	-	.	ID=gene1742;Dbxref=GeneID:4806956;Name=SSA_1781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1781
NC_009009.1	RefSeq	CDS	1767234	1767695	.	-	0	ID=cds1693;Parent=gene1742;Dbxref=Genbank:YP_001035714.1,GeneID:4806956;Name=YP_001035714.1;Note=GC: 43.07%25%3B Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035714.1;transl_table=11
NC_009009.1	RefSeq	gene	1767692	1768213	.	-	.	ID=gene1743;Dbxref=GeneID:4807939;Name=SSA_1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1782
NC_009009.1	RefSeq	CDS	1767692	1768213	.	-	0	ID=cds1694;Parent=gene1743;Dbxref=Genbank:YP_001035715.1,GeneID:4807939;Name=YP_001035715.1;Note=GC: 45.59%25%3B Codon Adaptation Index (CAI): 0.752.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035715.1;transl_table=11
NC_009009.1	RefSeq	gene	1768192	1769196	.	-	.	ID=gene1744;Dbxref=GeneID:4808049;Name=SSA_1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1783
NC_009009.1	RefSeq	CDS	1768192	1769196	.	-	0	ID=cds1695;Parent=gene1744;Dbxref=Genbank:YP_001035716.1,GeneID:4808049;Name=YP_001035716.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein;protein_id=YP_001035716.1;transl_table=11
NC_009009.1	RefSeq	gene	1769193	1769987	.	-	.	ID=gene1745;Dbxref=GeneID:4807901;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=SSA_1784
NC_009009.1	RefSeq	CDS	1769193	1769987	.	-	0	ID=cds1696;Parent=gene1745;Dbxref=Genbank:YP_001035717.1,GeneID:4807901;Name=YP_001035717.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=YP_001035717.1;transl_table=11
NC_009009.1	RefSeq	gene	1770086	1770334	.	-	.	ID=gene1746;Dbxref=GeneID:4808011;Name=SSA_1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1786
NC_009009.1	RefSeq	CDS	1770086	1770334	.	-	0	ID=cds1697;Parent=gene1746;Dbxref=Genbank:YP_001035718.1,GeneID:4808011;Name=YP_001035718.1;Note=GC: 41.37%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035718.1;transl_table=11
NC_009009.1	RefSeq	gene	1770391	1771641	.	-	.	ID=gene1747;Dbxref=GeneID:4807317;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=SSA_1787
NC_009009.1	RefSeq	CDS	1770391	1771641	.	-	0	ID=cds1698;Parent=gene1747;Dbxref=Genbank:YP_001035719.1,GeneID:4807317;Name=YP_001035719.1;Note=GC: 46.68%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase;protein_id=YP_001035719.1;transl_table=11
NC_009009.1	RefSeq	gene	1771746	1772429	.	-	.	ID=gene1748;Dbxref=GeneID:4807710;Name=SSA_1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1788
NC_009009.1	RefSeq	CDS	1771746	1772429	.	-	0	ID=cds1699;Parent=gene1748;Dbxref=Genbank:YP_001035720.1,GeneID:4807710;Name=YP_001035720.1;Note=GC: 42.11%25%3B Transporter classification TC:9.B.24.2.2. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.785. Curator(s): J. Alves;gbkey=CDS;product=integral membrane protein%2C receptor;protein_id=YP_001035720.1;transl_table=11
NC_009009.1	RefSeq	gene	1772455	1772946	.	-	.	ID=gene1749;Dbxref=GeneID:4807835;Name=SSA_1789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1789
NC_009009.1	RefSeq	CDS	1772455	1772946	.	-	0	ID=cds1700;Parent=gene1749;Dbxref=Genbank:YP_001035721.1,GeneID:4807835;Name=YP_001035721.1;Note=GC: 45.93%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): J. Alves;gbkey=CDS;product=HD superfamily metal-dependent phosphohydrolase;protein_id=YP_001035721.1;transl_table=11
NC_009009.1	RefSeq	gene	1772991	1773731	.	-	.	ID=gene1750;Dbxref=GeneID:4807890;Name=SSA_1790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1790
NC_009009.1	RefSeq	CDS	1772991	1773731	.	-	0	ID=cds1701;Parent=gene1750;Dbxref=Genbank:YP_001035722.1,GeneID:4807890;Name=YP_001035722.1;Note=GC: 43.72%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=SpoU rRNA methylase family protein;protein_id=YP_001035722.1;transl_table=11
NC_009009.1	RefSeq	gene	1773816	1774094	.	+	.	ID=gene1751;Dbxref=GeneID:4808006;Name=acyP;gbkey=Gene;gene=acyP;gene_biotype=protein_coding;locus_tag=SSA_1791
NC_009009.1	RefSeq	CDS	1773816	1774094	.	+	0	ID=cds1702;Parent=gene1751;Dbxref=Genbank:YP_001035723.1,GeneID:4808006;Name=YP_001035723.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;gene=acyP;product=acylphosphatase;protein_id=YP_001035723.1;transl_table=11
NC_009009.1	RefSeq	gene	1774176	1775099	.	+	.	ID=gene1752;Dbxref=GeneID:4807944;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=SSA_1792
NC_009009.1	RefSeq	CDS	1774176	1775099	.	+	0	ID=cds1703;Parent=gene1752;Dbxref=Genbank:YP_001035724.1,GeneID:4807944;Name=YP_001035724.1;Note=involved in biogenesis of membrane proteins%3B Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site;gbkey=CDS;gene=yidC;product=OxaA-like protein precursor;protein_id=YP_001035724.1;transl_table=11
NC_009009.1	RefSeq	gene	1775216	1776451	.	-	.	ID=gene1753;Dbxref=GeneID:4807906;Name=SSA_1793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1793
NC_009009.1	RefSeq	CDS	1775216	1776451	.	-	0	ID=cds1704;Parent=gene1753;Dbxref=Genbank:YP_001035725.1,GeneID:4807906;Name=YP_001035725.1;Note=GC: 42.8%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.77. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=histidine kinase (sensor protein);protein_id=YP_001035725.1;transl_table=11
NC_009009.1	RefSeq	gene	1776435	1777139	.	-	.	ID=gene1754;Dbxref=GeneID:4807623;Name=SSA_1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1794
NC_009009.1	RefSeq	CDS	1776435	1777139	.	-	0	ID=cds1705;Parent=gene1754;Dbxref=Genbank:YP_001035726.1,GeneID:4807623;Name=YP_001035726.1;Note=GC: 48.37%25%3B Codon Adaptation Index (CAI): 0.795. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035726.1;transl_table=11
NC_009009.1	RefSeq	gene	1777141	1777761	.	-	.	ID=gene1755;Dbxref=GeneID:4806808;Name=SSA_1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1795
NC_009009.1	RefSeq	CDS	1777141	1777761	.	-	0	ID=cds1706;Parent=gene1755;Dbxref=Genbank:YP_001035727.1,GeneID:4806808;Name=YP_001035727.1;Note=GC: 46.38%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): J. Alves;gbkey=CDS;product=guanosine 3'%2C5'-bis-pyrophosphate (ppGpp) synthetase;protein_id=YP_001035727.1;transl_table=11
NC_009009.1	RefSeq	gene	1777915	1778397	.	-	.	ID=gene1756;Dbxref=GeneID:4807504;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SSA_1796
NC_009009.1	RefSeq	CDS	1777915	1778397	.	-	0	ID=cds1707;Parent=gene1756;Dbxref=Genbank:YP_001035728.1,GeneID:4807504;Name=YP_001035728.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=YP_001035728.1;transl_table=11
NC_009009.1	RefSeq	gene	1778538	1780037	.	-	.	ID=gene1757;Dbxref=GeneID:4806833;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=SSA_1797
NC_009009.1	RefSeq	CDS	1778538	1780037	.	-	0	ID=cds1708;Parent=gene1757;Dbxref=Genbank:YP_001035729.1,GeneID:4806833;Name=YP_001035729.1;Note=GC: 44.27%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=pabC;product=aminodeoxychorismate lyase;protein_id=YP_001035729.1;transl_table=11
NC_009009.1	RefSeq	gene	1780088	1780603	.	-	.	ID=gene1758;Dbxref=GeneID:4806558;Name=SSA_1798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1798
NC_009009.1	RefSeq	CDS	1780088	1780603	.	-	0	ID=cds1709;Parent=gene1758;Dbxref=Genbank:YP_001035730.1,GeneID:4806558;Name=YP_001035730.1;Note=GC: 44.38%25%3B Codon Adaptation Index (CAI): 0.802.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035730.1;transl_table=11
NC_009009.1	RefSeq	gene	1780603	1781115	.	-	.	ID=gene1759;Dbxref=GeneID:4805968;Name=SSA_1799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1799
NC_009009.1	RefSeq	CDS	1780603	1781115	.	-	0	ID=cds1710;Parent=gene1759;Dbxref=Genbank:YP_001035731.1,GeneID:4805968;Name=YP_001035731.1;Note=GC: 46.78%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035731.1;transl_table=11
NC_009009.1	RefSeq	gene	1781127	1782461	.	-	.	ID=gene1760;Dbxref=GeneID:4807798;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=SSA_1800
NC_009009.1	RefSeq	CDS	1781127	1782461	.	-	0	ID=cds1711;Parent=gene1760;Dbxref=Genbank:YP_001035732.1,GeneID:4807798;Name=YP_001035732.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=YP_001035732.1;transl_table=11
NC_009009.1	RefSeq	gene	1782742	1783404	.	-	.	ID=gene1761;Dbxref=GeneID:4807367;Name=SSA_1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1801
NC_009009.1	RefSeq	CDS	1782742	1783404	.	-	0	ID=cds1712;Parent=gene1761;Dbxref=Genbank:YP_001035733.1,GeneID:4807367;Name=YP_001035733.1;Note=GC: 44.95%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035733.1;transl_table=11
NC_009009.1	RefSeq	gene	1783459	1786560	.	-	.	ID=gene1762;Dbxref=GeneID:4805909;Name=snf;gbkey=Gene;gene=snf;gene_biotype=protein_coding;locus_tag=SSA_1802
NC_009009.1	RefSeq	CDS	1783459	1786560	.	-	0	ID=cds1713;Parent=gene1762;Dbxref=Genbank:YP_001035734.1,GeneID:4805909;Name=YP_001035734.1;Note=GC: 45.39%25%3B Codon Adaptation Index (CAI): 0.785.;gbkey=CDS;gene=snf;product=Snf2 family protein;protein_id=YP_001035734.1;transl_table=11
NC_009009.1	RefSeq	gene	1786689	1787999	.	-	.	ID=gene1763;Dbxref=GeneID:4806294;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;gene_synonym=yfgK,yphC;locus_tag=SSA_1803
NC_009009.1	RefSeq	CDS	1786689	1787999	.	-	0	ID=cds1714;Parent=gene1763;Dbxref=Genbank:YP_001035735.1,GeneID:4806294;Name=YP_001035735.1;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;gbkey=CDS;gene=engA;product=GTP-binding protein EngA;protein_id=YP_001035735.1;transl_table=11
NC_009009.1	RefSeq	gene	1788042	1788758	.	-	.	ID=gene1764;Dbxref=GeneID:4807385;Name=SSA_1804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1804
NC_009009.1	RefSeq	CDS	1788042	1788758	.	-	0	ID=cds1715;Parent=gene1764;Dbxref=Genbank:YP_001035736.1,GeneID:4807385;Name=YP_001035736.1;Note=GC: 46.3%25%3B Codon Adaptation Index (CAI): 0.769.;gbkey=CDS;product=NADPH-flavin oxidoreductase;protein_id=YP_001035736.1;transl_table=11
NC_009009.1	RefSeq	gene	1788755	1789654	.	-	.	ID=gene1765;Dbxref=GeneID:4806049;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=SSA_1805
NC_009009.1	RefSeq	CDS	1788755	1789654	.	-	0	ID=cds1716;Parent=gene1765;Dbxref=Genbank:YP_001035737.1,GeneID:4806049;Name=YP_001035737.1;Note=Primosomal protein that may act to load helicase DnaC during DNA replication;gbkey=CDS;gene=dnaI;product=primosomal protein DnaI;protein_id=YP_001035737.1;transl_table=11
NC_009009.1	RefSeq	gene	1789655	1790839	.	-	.	ID=gene1766;Dbxref=GeneID:4806462;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=SSA_1806
NC_009009.1	RefSeq	CDS	1789655	1790839	.	-	0	ID=cds1717;Parent=gene1766;Dbxref=Genbank:YP_001035738.1,GeneID:4806462;Name=YP_001035738.1;Note=GC: 30.63%25%3B Codon Adaptation Index (CAI): 0.786. Curator(s): J. Alves;gbkey=CDS;gene=dnaB;product=replication initiation/membrane attachment protein DnaB;protein_id=YP_001035738.1;transl_table=11
NC_009009.1	RefSeq	gene	1790840	1791313	.	-	.	ID=gene1767;Dbxref=GeneID:4806775;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=SSA_1807
NC_009009.1	RefSeq	CDS	1790840	1791313	.	-	0	ID=cds1718;Parent=gene1767;Dbxref=Genbank:YP_001035739.1,GeneID:4806775;Name=YP_001035739.1;Note=GC: 45.78%25%3B Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;gene=nrdR;product=NrdR family transcriptional regulator;protein_id=YP_001035739.1;transl_table=11
NC_009009.1	RefSeq	gene	1791484	1792299	.	-	.	ID=gene1768;Dbxref=GeneID:4806796;Name=rgfB;gbkey=Gene;gene=rgfB;gene_biotype=protein_coding;locus_tag=SSA_1808
NC_009009.1	RefSeq	CDS	1791484	1792299	.	-	0	ID=cds1719;Parent=gene1768;Dbxref=Genbank:YP_001035740.1,GeneID:4806796;Name=YP_001035740.1;Note=GC: 45.34%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;gene=rgfB;product=hypothetical protein;protein_id=YP_001035740.1;transl_table=11
NC_009009.1	RefSeq	gene	1792317	1794509	.	-	.	ID=gene1769;Dbxref=GeneID:4806815;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=SSA_1809
NC_009009.1	RefSeq	CDS	1792317	1794509	.	-	0	ID=cds1720;Parent=gene1769;Dbxref=Genbank:YP_001035741.1,GeneID:4806815;Name=YP_001035741.1;Note=GC: 43.23%25%3B Transporter classification TC:4.A.1.1.2. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;gene=ptsG;product=PTS system glucose-specific EIIC BA component (EIICBA-Glc) (EII- Glc/EIII-Glc);protein_id=YP_001035741.1;transl_table=11
NC_009009.1	RefSeq	gene	1794797	1795486	.	-	.	ID=gene1770;Dbxref=GeneID:4806832;Name=csrR;gbkey=Gene;gene=csrR;gene_biotype=protein_coding;locus_tag=SSA_1810
NC_009009.1	RefSeq	CDS	1794797	1795486	.	-	0	ID=cds1721;Parent=gene1770;Dbxref=Genbank:YP_001035742.1,GeneID:4806832;Name=YP_001035742.1;Note=GC: 45.51%25%3B Codon Adaptation Index (CAI): 0.8. Curator(s): J. Alves;gbkey=CDS;gene=csrR;product=two-component response transcriptional regulator;protein_id=YP_001035742.1;transl_table=11
NC_009009.1	RefSeq	gene	1795496	1796920	.	-	.	ID=gene1771;Dbxref=GeneID:4805806;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=SSA_1811
NC_009009.1	RefSeq	CDS	1795496	1796920	.	-	0	ID=cds1722;Parent=gene1771;Dbxref=Genbank:YP_001035743.1,GeneID:4805806;Name=YP_001035743.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;gene=gnd;product=6-phosphogluconate dehydrogenase;protein_id=YP_001035743.1;transl_table=11
NC_009009.1	RefSeq	gene	1797198	1798424	.	-	.	ID=gene1772;Dbxref=GeneID:4806121;Name=SSA_1812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1812
NC_009009.1	RefSeq	CDS	1797198	1798424	.	-	0	ID=cds1723;Parent=gene1772;Dbxref=Genbank:YP_001035744.1,GeneID:4806121;Name=YP_001035744.1;Note=GC: 29.83%25%3B Codon Adaptation Index (CAI): 0.737.;gbkey=CDS;product=modification methylase;protein_id=YP_001035744.1;transl_table=11
NC_009009.1	RefSeq	gene	1798463	1799392	.	-	.	ID=gene1773;Dbxref=GeneID:4805996;Name=SSA_1813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1813
NC_009009.1	RefSeq	CDS	1798463	1799392	.	-	0	ID=cds1724;Parent=gene1773;Dbxref=Genbank:YP_001035745.1,GeneID:4805996;Name=YP_001035745.1;Note=GC: 30.65%25%3B Codon Adaptation Index (CAI): 0.735.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035745.1;transl_table=11
NC_009009.1	RefSeq	gene	1799389	1800069	.	-	.	ID=gene1774;Dbxref=GeneID:4806174;Name=SSA_1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1814
NC_009009.1	RefSeq	CDS	1799389	1800069	.	-	0	ID=cds1725;Parent=gene1774;Dbxref=Genbank:YP_001035746.1,GeneID:4806174;Name=YP_001035746.1;Note=GC: 32.6%25%3B Codon Adaptation Index (CAI): 0.756.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035746.1;transl_table=11
NC_009009.1	RefSeq	gene	1800073	1801002	.	-	.	ID=gene1775;Dbxref=GeneID:4805829;Name=SSA_1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1815
NC_009009.1	RefSeq	CDS	1800073	1801002	.	-	0	ID=cds1726;Parent=gene1775;Dbxref=Genbank:YP_001035747.1,GeneID:4805829;Name=YP_001035747.1;Note=GC: 32.15%25%3B Codon Adaptation Index (CAI): 0.765.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035747.1;transl_table=11
NC_009009.1	RefSeq	gene	1801017	1802975	.	-	.	ID=gene1776;Dbxref=GeneID:4806184;Name=SSA_1816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1816
NC_009009.1	RefSeq	CDS	1801017	1802975	.	-	0	ID=cds1727;Parent=gene1776;Dbxref=Genbank:YP_001035748.1,GeneID:4806184;Name=YP_001035748.1;Note=GC: 34.25%25%3B Codon Adaptation Index (CAI): 0.751.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035748.1;transl_table=11
NC_009009.1	RefSeq	gene	1802968	1805685	.	-	.	ID=gene1777;Dbxref=GeneID:4806609;Name=SSA_1817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1817
NC_009009.1	RefSeq	CDS	1802968	1805685	.	-	0	ID=cds1728;Parent=gene1777;Dbxref=Genbank:YP_001035749.1,GeneID:4806609;Name=YP_001035749.1;Note=GC: 33.48%25%3B Codon Adaptation Index (CAI): 0.75. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035749.1;transl_table=11
NC_009009.1	RefSeq	gene	1805745	1806200	.	-	.	ID=gene1778;Dbxref=GeneID:4806270;Name=SSA_1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1818
NC_009009.1	RefSeq	CDS	1805745	1806200	.	-	0	ID=cds1729;Parent=gene1778;Dbxref=Genbank:YP_001035750.1,GeneID:4806270;Name=YP_001035750.1;Note=GC: 36.84%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=very short patch repair endonuclease;protein_id=YP_001035750.1;transl_table=11
NC_009009.1	RefSeq	gene	1806285	1808957	.	-	.	ID=gene1779;Dbxref=GeneID:4806664;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=SSA_1819
NC_009009.1	RefSeq	CDS	1806285	1808957	.	-	0	ID=cds1730;Parent=gene1779;Dbxref=Genbank:YP_001035751.1,GeneID:4806664;Name=YP_001035751.1;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=YP_001035751.1;transl_table=11
NC_009009.1	RefSeq	gene	1808959	1809912	.	-	.	ID=gene1780;Dbxref=GeneID:4806078;Name=SSA_1820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1820
NC_009009.1	RefSeq	CDS	1808959	1809912	.	-	0	ID=cds1731;Parent=gene1780;Dbxref=Genbank:YP_001035752.1,GeneID:4806078;Name=YP_001035752.1;Note=GC: 24.74%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.715.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035752.1;transl_table=11
NC_009009.1	RefSeq	gene	1810137	1810700	.	-	.	ID=gene1781;Dbxref=GeneID:4806001;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=SSA_1821
NC_009009.1	RefSeq	CDS	1810137	1810700	.	-	0	ID=cds1732;Parent=gene1781;Dbxref=Genbank:YP_001035753.1,GeneID:4806001;Name=YP_001035753.1;Note=GC: 48.4%25%3B Codon Adaptation Index (CAI): 0.73. Curator(s): J. Alves;gbkey=CDS;gene=rimL;product=ribosomal protein N-acetylase;protein_id=YP_001035753.1;transl_table=11
NC_009009.1	RefSeq	gene	1810961	1811215	.	-	.	ID=gene1782;Dbxref=GeneID:4806173;Name=SSA_1822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1822
NC_009009.1	RefSeq	CDS	1810961	1811215	.	-	0	ID=cds1733;Parent=gene1782;Dbxref=Genbank:YP_001035754.1,GeneID:4806173;Name=YP_001035754.1;Note=GC: 47.84%25%3B Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035754.1;transl_table=11
NC_009009.1	RefSeq	gene	1811242	1812603	.	-	.	ID=gene1783;Dbxref=GeneID:4806592;Name=SSA_1823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1823
NC_009009.1	RefSeq	CDS	1811242	1812603	.	-	0	ID=cds1734;Parent=gene1783;Dbxref=Genbank:YP_001035755.1,GeneID:4806592;Name=YP_001035755.1;Note=GC: 49.12%25%3B Codon Adaptation Index (CAI): 0.763. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035755.1;transl_table=11
NC_009009.1	RefSeq	gene	1812606	1812836	.	-	.	ID=gene1784;Dbxref=GeneID:4806330;Name=SSA_1824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1824
NC_009009.1	RefSeq	CDS	1812606	1812836	.	-	0	ID=cds1735;Parent=gene1784;Dbxref=Genbank:YP_001035756.1,GeneID:4806330;Name=YP_001035756.1;Note=GC: 42.42%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035756.1;transl_table=11
NC_009009.1	RefSeq	gene	1813091	1814518	.	+	.	ID=gene1785;Dbxref=GeneID:4806162;Name=SSA_1825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1825
NC_009009.1	RefSeq	CDS	1813091	1814518	.	+	0	ID=cds1736;Parent=gene1785;Dbxref=Genbank:YP_001035757.1,GeneID:4806162;Name=YP_001035757.1;Note=GC: 43.14%25%3B Codon Adaptation Index (CAI): 0.768. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035757.1;transl_table=11
NC_009009.1	RefSeq	gene	1814676	1816184	.	+	.	ID=gene1786;Dbxref=GeneID:4806424;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=SSA_1826
NC_009009.1	RefSeq	CDS	1814676	1816184	.	+	0	ID=cds1737;Parent=gene1786;Dbxref=Genbank:YP_001035758.1,GeneID:4806424;Name=YP_001035758.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=YP_001035758.1;transl_table=11
NC_009009.1	RefSeq	gene	1816252	1818078	.	+	.	ID=gene1787;Dbxref=GeneID:4806309;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=SSA_1827
NC_009009.1	RefSeq	CDS	1816252	1818078	.	+	0	ID=cds1738;Parent=gene1787;Dbxref=Genbank:YP_001035759.1,GeneID:4806309;Name=YP_001035759.1;Note=GC: 48.17%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.769. SignalP prediction: Yes (prob. 0.943).;gbkey=CDS;gene=glp;product=alpha-glycerophosphate oxidase;protein_id=YP_001035759.1;transl_table=11
NC_009009.1	RefSeq	gene	1818147	1818851	.	+	.	ID=gene1788;Dbxref=GeneID:4806495;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=SSA_1828
NC_009009.1	RefSeq	CDS	1818147	1818851	.	+	0	ID=cds1739;Parent=gene1788;Dbxref=Genbank:YP_001035760.1,GeneID:4806495;Name=YP_001035760.1;Note=GC: 48.23%25%3B Transporter classification TC:1.A.8.2.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;gene=glpF;product=glycerol uptake facilitator protein;protein_id=YP_001035760.1;transl_table=11
NC_009009.1	RefSeq	gene	1819049	1820419	.	-	.	ID=gene1789;Dbxref=GeneID:4805924;Name=SSA_1829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1829
NC_009009.1	RefSeq	CDS	1819049	1820419	.	-	0	ID=cds1740;Parent=gene1789;Dbxref=Genbank:YP_001035761.1,GeneID:4805924;Name=YP_001035761.1;Note=GC: 48.65%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_001035761.1;transl_table=11
NC_009009.1	RefSeq	gene	1820475	1821251	.	+	.	ID=gene1790;Dbxref=GeneID:4805849;Name=SSA_1830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1830
NC_009009.1	RefSeq	CDS	1820475	1821251	.	+	0	ID=cds1741;Parent=gene1790;Dbxref=Genbank:YP_001035762.1,GeneID:4805849;Name=YP_001035762.1;Note=GC: 46.2%25%3B Codon Adaptation Index (CAI): 0.717.;gbkey=CDS;product=aminoglycoside phosphotransferase;protein_id=YP_001035762.1;transl_table=11
NC_009009.1	RefSeq	gene	1821278	1822054	.	+	.	ID=gene1791;Dbxref=GeneID:4805822;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=SSA_1831
NC_009009.1	RefSeq	CDS	1821278	1822054	.	+	0	ID=cds1742;Parent=gene1791;Dbxref=Genbank:YP_001035763.1,GeneID:4805822;Name=YP_001035763.1;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;gbkey=CDS;gene=recX;product=recombination regulator RecX;protein_id=YP_001035763.1;transl_table=11
NC_009009.1	RefSeq	gene	1822141	1822674	.	+	.	ID=gene1792;Dbxref=GeneID:4807059;Name=SSA_1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1832
NC_009009.1	RefSeq	CDS	1822141	1822674	.	+	0	ID=cds1743;Parent=gene1792;Dbxref=Genbank:YP_001035764.1,GeneID:4807059;Name=YP_001035764.1;Note=GC: 37.83%25%3B Codon Adaptation Index (CAI): 0.802.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035764.1;transl_table=11
NC_009009.1	RefSeq	gene	1822802	1823119	.	+	.	ID=gene1793;Dbxref=GeneID:4807110;Name=SSA_1833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1833
NC_009009.1	RefSeq	CDS	1822802	1823119	.	+	0	ID=cds1744;Parent=gene1793;Dbxref=Genbank:YP_001035765.1,GeneID:4807110;Name=YP_001035765.1;Note=GC: 38.36%25%3B Codon Adaptation Index (CAI): 0.729.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035765.1;transl_table=11
NC_009009.1	RefSeq	gene	1823484	1823560	.	-	.	ID=gene1794;Dbxref=GeneID:4807334;Name=SSA_2465;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2465
NC_009009.1	RefSeq	tRNA	1823484	1823560	.	-	.	ID=rna47;Parent=gene1794;Dbxref=GeneID:4807334;Note=tRNA-Pro_2;gbkey=tRNA;product=tRNA-Pro
NC_009009.1	RefSeq	exon	1823484	1823560	.	-	.	ID=id48;Parent=rna47;Dbxref=GeneID:4807334;Note=tRNA-Pro_2;gbkey=tRNA;product=tRNA-Pro
NC_009009.1	RefSeq	gene	1823607	1823680	.	-	.	ID=gene1795;Dbxref=GeneID:4806896;Name=SSA_2464;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2464
NC_009009.1	RefSeq	tRNA	1823607	1823680	.	-	.	ID=rna48;Parent=gene1795;Dbxref=GeneID:4806896;Note=tRNA-Arg_4;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	exon	1823607	1823680	.	-	.	ID=id49;Parent=rna48;Dbxref=GeneID:4806896;Note=tRNA-Arg_4;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	gene	1823738	1823811	.	-	.	ID=gene1796;Dbxref=GeneID:4806907;Name=SSA_2463;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2463
NC_009009.1	RefSeq	tRNA	1823738	1823811	.	-	.	ID=rna49;Parent=gene1796;Dbxref=GeneID:4806907;Note=tRNA-Arg_3;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	exon	1823738	1823811	.	-	.	ID=id50;Parent=rna49;Dbxref=GeneID:4806907;Note=tRNA-Arg_3;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	gene	1823843	1823928	.	-	.	ID=gene1797;Dbxref=GeneID:4807189;Name=SSA_2462;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2462
NC_009009.1	RefSeq	tRNA	1823843	1823928	.	-	.	ID=rna50;Parent=gene1797;Dbxref=GeneID:4807189;Note=tRNA-Leu_7;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	1823843	1823928	.	-	.	ID=id51;Parent=rna50;Dbxref=GeneID:4807189;Note=tRNA-Leu_7;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	1823936	1824007	.	-	.	ID=gene1798;Dbxref=GeneID:4807148;Name=SSA_2461;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2461
NC_009009.1	RefSeq	tRNA	1823936	1824007	.	-	.	ID=rna51;Parent=gene1798;Dbxref=GeneID:4807148;Note=tRNA-Gly_4;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	exon	1823936	1824007	.	-	.	ID=id52;Parent=rna51;Dbxref=GeneID:4807148;Note=tRNA-Gly_4;gbkey=tRNA;product=tRNA-Gly
NC_009009.1	RefSeq	gene	1824022	1824094	.	-	.	ID=gene1799;Dbxref=GeneID:4806955;Name=SSA_2460;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2460
NC_009009.1	RefSeq	tRNA	1824022	1824094	.	-	.	ID=rna52;Parent=gene1799;Dbxref=GeneID:4806955;Note=tRNA-Thr_3;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	exon	1824022	1824094	.	-	.	ID=id53;Parent=rna52;Dbxref=GeneID:4806955;Note=tRNA-Thr_3;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	gene	1824111	1824192	.	-	.	ID=gene1800;Dbxref=GeneID:4808105;Name=SSA_2459;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2459
NC_009009.1	RefSeq	tRNA	1824111	1824192	.	-	.	ID=rna53;Parent=gene1800;Dbxref=GeneID:4808105;Note=tRNA-Leu_6;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	1824111	1824192	.	-	.	ID=id54;Parent=rna53;Dbxref=GeneID:4808105;Note=tRNA-Leu_6;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	1824198	1824270	.	-	.	ID=gene1801;Dbxref=GeneID:4806312;Name=SSA_2458;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2458
NC_009009.1	RefSeq	tRNA	1824198	1824270	.	-	.	ID=rna54;Parent=gene1801;Dbxref=GeneID:4806312;Note=tRNA-Lys_2;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	exon	1824198	1824270	.	-	.	ID=id55;Parent=rna54;Dbxref=GeneID:4806312;Note=tRNA-Lys_2;gbkey=tRNA;product=tRNA-Lys
NC_009009.1	RefSeq	gene	1824303	1824375	.	-	.	ID=gene1802;Dbxref=GeneID:4806493;Name=SSA_2457;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2457
NC_009009.1	RefSeq	tRNA	1824303	1824375	.	-	.	ID=rna55;Parent=gene1802;Dbxref=GeneID:4806493;Note=tRNA-Asp_2;gbkey=tRNA;product=tRNA-Asp
NC_009009.1	RefSeq	exon	1824303	1824375	.	-	.	ID=id56;Parent=rna55;Dbxref=GeneID:4806493;Note=tRNA-Asp_2;gbkey=tRNA;product=tRNA-Asp
NC_009009.1	RefSeq	gene	1824392	1824464	.	-	.	ID=gene1803;Dbxref=GeneID:4807361;Name=SSA_2456;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2456
NC_009009.1	RefSeq	tRNA	1824392	1824464	.	-	.	ID=rna56;Parent=gene1803;Dbxref=GeneID:4807361;Note=tRNA-Val_3;gbkey=tRNA;product=tRNA-Val
NC_009009.1	RefSeq	exon	1824392	1824464	.	-	.	ID=id57;Parent=rna56;Dbxref=GeneID:4807361;Note=tRNA-Val_3;gbkey=tRNA;product=tRNA-Val
NC_009009.1	RefSeq	gene	1824468	1824583	.	-	.	ID=gene1804;Dbxref=GeneID:4807517;Name=SSA_2410;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2410
NC_009009.1	RefSeq	rRNA	1824468	1824583	.	-	.	ID=rna57;Parent=gene1804;Dbxref=GeneID:4807517;Note=rRNA_5S_3;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	exon	1824468	1824583	.	-	.	ID=id58;Parent=rna57;Dbxref=GeneID:4807517;Note=rRNA_5S_3;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	gene	1824702	1827599	.	-	.	ID=gene1805;Dbxref=GeneID:4807375;Name=SSA_2406;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2406
NC_009009.1	RefSeq	rRNA	1824702	1827599	.	-	.	ID=rna58;Parent=gene1805;Dbxref=GeneID:4807375;Note=rRNA_23S_3;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	exon	1824702	1827599	.	-	.	ID=id59;Parent=rna58;Dbxref=GeneID:4807375;Note=rRNA_23S_3;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	gene	1827726	1827798	.	-	.	ID=gene1806;Dbxref=GeneID:4807894;Name=SSA_2455;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2455
NC_009009.1	RefSeq	tRNA	1827726	1827798	.	-	.	ID=rna59;Parent=gene1806;Dbxref=GeneID:4807894;Note=tRNA-Ala_4;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	exon	1827726	1827798	.	-	.	ID=id60;Parent=rna59;Dbxref=GeneID:4807894;Note=tRNA-Ala_4;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	gene	1827860	1829410	.	-	.	ID=gene1807;Dbxref=GeneID:4807656;Name=SSA_2402;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2402
NC_009009.1	RefSeq	rRNA	1827860	1829410	.	-	.	ID=rna60;Parent=gene1807;Dbxref=GeneID:4807656;Note=rRNA_16S_3;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	exon	1827860	1829410	.	-	.	ID=id61;Parent=rna60;Dbxref=GeneID:4807656;Note=rRNA_16S_3;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	gene	1829742	1830284	.	-	.	ID=gene1808;Dbxref=GeneID:4807705;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=SSA_1834
NC_009009.1	RefSeq	CDS	1829742	1830284	.	-	0	ID=cds1745;Parent=gene1808;Dbxref=Genbank:YP_001035766.1,GeneID:4807705;Name=YP_001035766.1;Note=GC: 41.07%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): J. Alves;gbkey=CDS;gene=raiA;product=30S ribosomal interface protein S30EA;protein_id=YP_001035766.1;transl_table=11
NC_009009.1	RefSeq	gene	1830366	1831031	.	-	.	ID=gene1809;Dbxref=GeneID:4806473;Name=comFC;gbkey=Gene;gene=comFC;gene_biotype=protein_coding;locus_tag=SSA_1835
NC_009009.1	RefSeq	CDS	1830366	1831031	.	-	0	ID=cds1746;Parent=gene1809;Dbxref=Genbank:YP_001035767.1,GeneID:4806473;Name=YP_001035767.1;Note=GC: 38.14%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;gene=comFC;product=late competence protein;protein_id=YP_001035767.1;transl_table=11
NC_009009.1	RefSeq	gene	1831028	1832326	.	-	.	ID=gene1810;Dbxref=GeneID:4806469;Name=comFA;gbkey=Gene;gene=comFA;gene_biotype=protein_coding;locus_tag=SSA_1836
NC_009009.1	RefSeq	CDS	1831028	1832326	.	-	0	ID=cds1747;Parent=gene1810;Dbxref=Genbank:YP_001035768.1,GeneID:4806469;Name=YP_001035768.1;Note=GC: 42.57%25%3B Transporter classification TC:3.A.11.1.1. Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves;gbkey=CDS;gene=comFA;product=superfamily II ATP-dependent DNA/RNA helicase;protein_id=YP_001035768.1;transl_table=11
NC_009009.1	RefSeq	gene	1832383	1833015	.	+	.	ID=gene1811;Dbxref=GeneID:4806871;Name=SSA_1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1837
NC_009009.1	RefSeq	CDS	1832383	1833015	.	+	0	ID=cds1748;Parent=gene1811;Dbxref=Genbank:YP_001035769.1,GeneID:4806871;Name=YP_001035769.1;Note=GC: 42.5%25%3B Codon Adaptation Index (CAI): 0.795. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035769.1;transl_table=11
NC_009009.1	RefSeq	gene	1833116	1834045	.	+	.	ID=gene1812;Dbxref=GeneID:4806616;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=SSA_1839
NC_009009.1	RefSeq	CDS	1833116	1834045	.	+	0	ID=cds1749;Parent=gene1812;Dbxref=Genbank:YP_001035770.1,GeneID:4806616;Name=YP_001035770.1;Note=GC: 47.42%25%3B Codon Adaptation Index (CAI): 0.797.;gbkey=CDS;gene=cysK;product=cysteine synthase;protein_id=YP_001035770.1;transl_table=11
NC_009009.1	RefSeq	gene	1834150	1834512	.	-	.	ID=gene1813;Dbxref=GeneID:4807185;Name=SSA_1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1840
NC_009009.1	RefSeq	CDS	1834150	1834512	.	-	0	ID=cds1750;Parent=gene1813;Dbxref=Genbank:YP_001035771.1,GeneID:4807185;Name=YP_001035771.1;Note=GC: 40.22%25%3B Codon Adaptation Index (CAI): 0.814. Contains ribosomal protein S1 domain.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035771.1;transl_table=11
NC_009009.1	RefSeq	gene	1834512	1835912	.	-	.	ID=gene1814;Dbxref=GeneID:4806464;Name=pplB;gbkey=Gene;gene=pplB;gene_biotype=protein_coding;locus_tag=SSA_1841
NC_009009.1	RefSeq	CDS	1834512	1835912	.	-	0	ID=cds1751;Parent=gene1814;Dbxref=Genbank:YP_001035772.1,GeneID:4806464;Name=YP_001035772.1;Note=GC: 44.97%25%3B Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;gene=pplB;product=Cof family protein/peptidyl-prolyl cis-trans isomerase%2C cyclophilin type;protein_id=YP_001035772.1;transl_table=11
NC_009009.1	RefSeq	gene	1835952	1836584	.	-	.	ID=gene1815;Dbxref=GeneID:4805976;Name=SSA_1842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1842
NC_009009.1	RefSeq	CDS	1835952	1836584	.	-	0	ID=cds1752;Parent=gene1815;Dbxref=Genbank:YP_001035773.1,GeneID:4805976;Name=YP_001035773.1;Note=GC: 43.92%25%3B Codon Adaptation Index (CAI): 0.789. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035773.1;transl_table=11
NC_009009.1	RefSeq	gene	1836562	1837581	.	-	.	ID=gene1816;Dbxref=GeneID:4806109;Name=SSA_1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1843
NC_009009.1	RefSeq	CDS	1836562	1837581	.	-	0	ID=cds1753;Parent=gene1816;Dbxref=Genbank:YP_001035774.1,GeneID:4806109;Name=YP_001035774.1;Note=GC: 43.04%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=histidine kinase;protein_id=YP_001035774.1;transl_table=11
NC_009009.1	RefSeq	gene	1837578	1838273	.	-	.	ID=gene1817;Dbxref=GeneID:4806812;Name=SSA_1844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1844
NC_009009.1	RefSeq	CDS	1837578	1838273	.	-	0	ID=cds1754;Parent=gene1817;Dbxref=Genbank:YP_001035775.1,GeneID:4806812;Name=YP_001035775.1;Note=GC: 40.52%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035775.1;transl_table=11
NC_009009.1	RefSeq	gene	1838418	1840271	.	-	.	ID=gene1818;Dbxref=GeneID:4805986;Name=pkn;gbkey=Gene;gene=pkn;gene_biotype=protein_coding;locus_tag=SSA_1845
NC_009009.1	RefSeq	CDS	1838418	1840271	.	-	0	ID=cds1755;Parent=gene1818;Dbxref=Genbank:YP_001035776.1,GeneID:4805986;Name=YP_001035776.1;Note=GC: 45.95%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;gene=pkn;product=serine/threonine protein kinase;protein_id=YP_001035776.1;transl_table=11
NC_009009.1	RefSeq	gene	1840268	1841008	.	-	.	ID=gene1819;Dbxref=GeneID:4805832;Name=pppL;gbkey=Gene;gene=pppL;gene_biotype=protein_coding;locus_tag=SSA_1846
NC_009009.1	RefSeq	CDS	1840268	1841008	.	-	0	ID=cds1756;Parent=gene1819;Dbxref=Genbank:YP_001035777.1,GeneID:4805832;Name=YP_001035777.1;Note=GC: 43.99%25%3B Codon Adaptation Index (CAI): 0.817.;gbkey=CDS;gene=pppL;product=phosphoprotein phosphatase;protein_id=YP_001035777.1;transl_table=11
NC_009009.1	RefSeq	gene	1841027	1842094	.	-	.	ID=gene1820;Dbxref=GeneID:4805970;Name=sunL;gbkey=Gene;gene=sunL;gene_biotype=protein_coding;locus_tag=SSA_1847
NC_009009.1	RefSeq	CDS	1841027	1842094	.	-	0	ID=cds1757;Parent=gene1820;Dbxref=Genbank:YP_001035778.1,GeneID:4805970;Name=YP_001035778.1;Note=GC: 44.29%25%3B Codon Adaptation Index (CAI): 0.748.;gbkey=CDS;gene=sunL;product=rRNA methyltransferase RsmB;protein_id=YP_001035778.1;transl_table=11
NC_009009.1	RefSeq	gene	1842333	1843268	.	-	.	ID=gene1821;Dbxref=GeneID:4806180;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SSA_1848
NC_009009.1	RefSeq	CDS	1842333	1843268	.	-	0	ID=cds1758;Parent=gene1821;Dbxref=Genbank:YP_001035779.1,GeneID:4806180;Name=YP_001035779.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=YP_001035779.1;transl_table=11
NC_009009.1	RefSeq	gene	1843352	1845739	.	-	.	ID=gene1822;Dbxref=GeneID:4806134;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=SSA_1849
NC_009009.1	RefSeq	CDS	1843352	1845739	.	-	0	ID=cds1759;Parent=gene1822;Dbxref=Genbank:YP_001035780.1,GeneID:4806134;Name=YP_001035780.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;gene=priA;product=primosome assembly protein PriA;protein_id=YP_001035780.1;transl_table=11
NC_009009.1	RefSeq	gene	1845800	1846114	.	-	.	ID=gene1823;Dbxref=GeneID:4807860;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=SSA_1850
NC_009009.1	RefSeq	CDS	1845800	1846114	.	-	0	ID=cds1760;Parent=gene1823;Dbxref=Genbank:YP_001035781.1,GeneID:4807860;Name=YP_001035781.1;Note=Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=YP_001035781.1;transl_table=11
NC_009009.1	RefSeq	gene	1846140	1846772	.	-	.	ID=gene1824;Dbxref=GeneID:4807680;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SSA_1851
NC_009009.1	RefSeq	CDS	1846140	1846772	.	-	0	ID=cds1761;Parent=gene1824;Dbxref=Genbank:YP_001035782.1,GeneID:4807680;Name=YP_001035782.1;Note=Essential for recycling GMP and indirectly%2C cGMP;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=YP_001035782.1;transl_table=11
NC_009009.1	RefSeq	gene	1846959	1848572	.	-	.	ID=gene1825;Dbxref=GeneID:4807852;Name=SSA_1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1852
NC_009009.1	RefSeq	CDS	1846959	1848572	.	-	0	ID=cds1762;Parent=gene1825;Dbxref=Genbank:YP_001035783.1,GeneID:4807852;Name=YP_001035783.1;Note=GC: 45.85%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.542)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035783.1;transl_table=11
NC_009009.1	RefSeq	gene	1848782	1849420	.	+	.	ID=gene1826;Dbxref=GeneID:4807415;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=SSA_1853
NC_009009.1	RefSeq	CDS	1848782	1849420	.	+	0	ID=cds1763;Parent=gene1826;Dbxref=Genbank:YP_001035784.1,GeneID:4807415;Name=YP_001035784.1;Note=GC: 43.82%25%3B Codon Adaptation Index (CAI): 0.802.;gbkey=CDS;gene=luxS;product=S-ribosylhomocysteine lyase;protein_id=YP_001035784.1;transl_table=11
NC_009009.1	RefSeq	gene	1849523	1850974	.	-	.	ID=gene1827;Dbxref=GeneID:4807925;Name=SSA_1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1854
NC_009009.1	RefSeq	CDS	1849523	1850974	.	-	0	ID=cds1764;Parent=gene1827;Dbxref=Genbank:YP_001035785.1,GeneID:4807925;Name=YP_001035785.1;Note=GC: 45.39%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035785.1;transl_table=11
NC_009009.1	RefSeq	gene	1850987	1852141	.	-	.	ID=gene1828;Dbxref=GeneID:4807829;Name=SSA_1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1855
NC_009009.1	RefSeq	CDS	1850987	1852141	.	-	0	ID=cds1765;Parent=gene1828;Dbxref=Genbank:YP_001035786.1,GeneID:4807829;Name=YP_001035786.1;Note=GC: 45.37%25%3B Codon Adaptation Index (CAI): 0.803.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035786.1;transl_table=11
NC_009009.1	RefSeq	gene	1852167	1852298	.	-	.	ID=gene1829;Dbxref=GeneID:4805949;Name=SSA_1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1856
NC_009009.1	RefSeq	CDS	1852167	1852298	.	-	0	ID=cds1766;Parent=gene1829;Dbxref=Genbank:YP_001035787.1,GeneID:4805949;Name=YP_001035787.1;Note=GC: 41.67%25%3B Codon Adaptation Index (CAI): 0.706.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035787.1;transl_table=11
NC_009009.1	RefSeq	gene	1852815	1853177	.	-	.	ID=gene1830;Dbxref=GeneID:4806587;Name=SSA_1857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1857
NC_009009.1	RefSeq	CDS	1852815	1853177	.	-	0	ID=cds1767;Parent=gene1830;Dbxref=Genbank:YP_001035788.1,GeneID:4806587;Name=YP_001035788.1;Note=GC: 42.7%25%3B Codon Adaptation Index (CAI): 0.82. Curator(s): J. Alves;gbkey=CDS;product=DivIVA domain-containing protein;protein_id=YP_001035788.1;transl_table=11
NC_009009.1	RefSeq	gene	1853249	1853776	.	-	.	ID=gene1831;Dbxref=GeneID:4806086;Name=SSA_1858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1858
NC_009009.1	RefSeq	CDS	1853249	1853776	.	-	0	ID=cds1768;Parent=gene1831;Dbxref=Genbank:YP_001035789.1,GeneID:4806086;Name=YP_001035789.1;Note=GC: 35.61%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035789.1;transl_table=11
NC_009009.1	RefSeq	gene	1853844	1854446	.	+	.	ID=gene1832;Dbxref=GeneID:4806654;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=SSA_1859
NC_009009.1	RefSeq	CDS	1853844	1854446	.	+	0	ID=cds1769;Parent=gene1832;Dbxref=Genbank:YP_001035790.1,GeneID:4806654;Name=YP_001035790.1;Note=functions in homologous recombination%2C DNA repair%2C and chromosome segregation%3B binds preferentially to three- and four-stranded DNA intermediates%3B introduces specific nick sites in four-stranded DNA substrates%3B functions similarly to Escherichia coli RuvC;gbkey=CDS;gene=recU;product=Holliday junction-specific endonuclease;protein_id=YP_001035790.1;transl_table=11
NC_009009.1	RefSeq	gene	1854439	1856580	.	+	.	ID=gene1833;Dbxref=GeneID:4806843;Name=pbp1A;gbkey=Gene;gene=pbp1A;gene_biotype=protein_coding;locus_tag=SSA_1860
NC_009009.1	RefSeq	CDS	1854439	1856580	.	+	0	ID=cds1770;Parent=gene1833;Dbxref=Genbank:YP_001035791.1,GeneID:4806843;Name=YP_001035791.1;Note=GC: 45.28%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.775. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.699).;gbkey=CDS;gene=pbp1A;product=penicillin-binding protein 1A;protein_id=YP_001035791.1;transl_table=11
NC_009009.1	RefSeq	gene	1856658	1857992	.	-	.	ID=gene1834;Dbxref=GeneID:4807216;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=SSA_1861
NC_009009.1	RefSeq	CDS	1856658	1857992	.	-	0	ID=cds1771;Parent=gene1834;Dbxref=Genbank:YP_001035792.1,GeneID:4807216;Name=YP_001035792.1;Note=GC: 45.62%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;gene=pepC;product=aminopeptidase;protein_id=YP_001035792.1;transl_table=11
NC_009009.1	RefSeq	gene	1858071	1858631	.	-	.	ID=gene1835;Dbxref=GeneID:4807899;Name=SSA_1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1862
NC_009009.1	RefSeq	CDS	1858071	1858631	.	-	0	ID=cds1772;Parent=gene1835;Dbxref=Genbank:YP_001035793.1,GeneID:4807899;Name=YP_001035793.1;Note=GC: 43.49%25%3B Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035793.1;transl_table=11
NC_009009.1	RefSeq	gene	1858679	1859503	.	-	.	ID=gene1836;Dbxref=GeneID:4806947;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SSA_1863
NC_009009.1	RefSeq	CDS	1858679	1859503	.	-	0	ID=cds1773;Parent=gene1836;Dbxref=Genbank:YP_001035794.1,GeneID:4806947;Name=YP_001035794.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=YP_001035794.1;transl_table=11
NC_009009.1	RefSeq	gene	1859500	1860960	.	-	.	ID=gene1837;Dbxref=GeneID:4807312;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=SSA_1864
NC_009009.1	RefSeq	CDS	1859500	1860960	.	-	0	ID=cds1774;Parent=gene1837;Dbxref=Genbank:YP_001035795.1,GeneID:4807312;Name=YP_001035795.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;gene=pncB;product=nicotinate phosphoribosyltransferase;protein_id=YP_001035795.1;transl_table=11
NC_009009.1	RefSeq	gene	1861068	1861982	.	-	.	ID=gene1838;Dbxref=GeneID:4807248;Name=SSA_1865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1865
NC_009009.1	RefSeq	CDS	1861068	1861982	.	-	0	ID=cds1775;Parent=gene1838;Dbxref=Genbank:YP_001035796.1,GeneID:4807248;Name=YP_001035796.1;Note=GC: 48.63%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=thioredoxin reductase;protein_id=YP_001035796.1;transl_table=11
NC_009009.1	RefSeq	gene	1862048	1862272	.	-	.	ID=gene1839;Dbxref=GeneID:4807455;Name=SSA_1866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1866
NC_009009.1	RefSeq	CDS	1862048	1862272	.	-	0	ID=cds1776;Parent=gene1839;Dbxref=Genbank:YP_001035797.1,GeneID:4807455;Name=YP_001035797.1;Note=GC: 44.44%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035797.1;transl_table=11
NC_009009.1	RefSeq	gene	1862443	1863186	.	-	.	ID=gene1840;Dbxref=GeneID:4807489;Name=SSA_1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1867
NC_009009.1	RefSeq	CDS	1862443	1863186	.	-	0	ID=cds1777;Parent=gene1840;Dbxref=Genbank:YP_001035798.1,GeneID:4807489;Name=YP_001035798.1;Note=GC: 44.09%25%3B Transporter classification TC:3.A.1.3.13. Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;product=polar amino acid ABC transporter ATPase;protein_id=YP_001035798.1;transl_table=11
NC_009009.1	RefSeq	gene	1863186	1863992	.	-	.	ID=gene1841;Dbxref=GeneID:4807105;Name=SSA_1868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1868
NC_009009.1	RefSeq	CDS	1863186	1863992	.	-	0	ID=cds1778;Parent=gene1841;Dbxref=Genbank:YP_001035799.1,GeneID:4807105;Name=YP_001035799.1;Note=GC: 45.85%25%3B Transporter classification TC:3.A.1.3.13. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.771. Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter permease;protein_id=YP_001035799.1;transl_table=11
NC_009009.1	RefSeq	gene	1864242	1865585	.	-	.	ID=gene1842;Dbxref=GeneID:4807898;Name=rheB;gbkey=Gene;gene=rheB;gene_biotype=protein_coding;locus_tag=SSA_1869
NC_009009.1	RefSeq	CDS	1864242	1865585	.	-	0	ID=cds1779;Parent=gene1842;Dbxref=Genbank:YP_001035800.1,GeneID:4807898;Name=YP_001035800.1;Note=GC: 48.44%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;gene=rheB;product=ATP-dependent RNA helicase;protein_id=YP_001035800.1;transl_table=11
NC_009009.1	RefSeq	gene	1865690	1866673	.	-	.	ID=gene1843;Dbxref=GeneID:4807360;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SSA_1870
NC_009009.1	RefSeq	CDS	1865690	1866673	.	-	0	ID=cds1780;Parent=gene1843;Dbxref=Genbank:YP_001035801.1,GeneID:4807360;Name=YP_001035801.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=YP_001035801.1;transl_table=11
NC_009009.1	RefSeq	gene	1866675	1868963	.	-	.	ID=gene1844;Dbxref=GeneID:4807424;Name=pbpX;gbkey=Gene;gene=pbpX;gene_biotype=protein_coding;locus_tag=SSA_1871
NC_009009.1	RefSeq	CDS	1866675	1868963	.	-	0	ID=cds1781;Parent=gene1844;Dbxref=Genbank:YP_001035802.1,GeneID:4807424;Name=YP_001035802.1;Note=GC: 45.35%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.924).;gbkey=CDS;gene=pbpX;product=penicillin-binding protein 2X;protein_id=YP_001035802.1;transl_table=11
NC_009009.1	RefSeq	gene	1868953	1869276	.	-	.	ID=gene1845;Dbxref=GeneID:4808091;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=SSA_1872
NC_009009.1	RefSeq	CDS	1868953	1869276	.	-	0	ID=cds1782;Parent=gene1845;Dbxref=Genbank:YP_001035803.1,GeneID:4808091;Name=YP_001035803.1;Note=GC: 44.44%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.775.;gbkey=CDS;gene=ftsL;product=cell division protein;protein_id=YP_001035803.1;transl_table=11
NC_009009.1	RefSeq	gene	1869284	1870234	.	-	.	ID=gene1846;Dbxref=GeneID:4806919;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=SSA_1873
NC_009009.1	RefSeq	CDS	1869284	1870234	.	-	0	ID=cds1783;Parent=gene1846;Dbxref=Genbank:YP_001035804.1,GeneID:4806919;Name=YP_001035804.1;Note=GC: 47.32%25%3B Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=YP_001035804.1;transl_table=11
NC_009009.1	RefSeq	gene	1870435	1870650	.	+	.	ID=gene1847;Dbxref=GeneID:4807295;Name=yorfE;gbkey=Gene;gene=yorfE;gene_biotype=protein_coding;locus_tag=SSA_1874
NC_009009.1	RefSeq	CDS	1870435	1870650	.	+	0	ID=cds1784;Parent=gene1847;Dbxref=Genbank:YP_001035805.1,GeneID:4807295;Name=YP_001035805.1;Note=GC: 43.52%25%3B Codon Adaptation Index (CAI): 0.739.;gbkey=CDS;gene=yorfE;product=hypothetical protein;protein_id=YP_001035805.1;transl_table=11
NC_009009.1	RefSeq	gene	1870698	1871228	.	+	.	ID=gene1848;Dbxref=GeneID:4807741;Name=SSA_1875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1875
NC_009009.1	RefSeq	CDS	1870698	1871228	.	+	0	ID=cds1785;Parent=gene1848;Dbxref=Genbank:YP_001035806.1,GeneID:4807741;Name=YP_001035806.1;Note=GC: 38.61%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.742.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035806.1;transl_table=11
NC_009009.1	RefSeq	gene	1871260	1871802	.	+	.	ID=gene1849;Dbxref=GeneID:4807077;Name=SSA_1876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1876
NC_009009.1	RefSeq	CDS	1871260	1871802	.	+	0	ID=cds1786;Parent=gene1849;Dbxref=Genbank:YP_001035807.1,GeneID:4807077;Name=YP_001035807.1;Note=GC: 41.62%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.746.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035807.1;transl_table=11
NC_009009.1	RefSeq	gene	1871799	1871975	.	+	.	ID=gene1850;Dbxref=GeneID:4807717;Name=SSA_1877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1877
NC_009009.1	RefSeq	CDS	1871799	1871975	.	+	0	ID=cds1787;Parent=gene1850;Dbxref=Genbank:YP_001035808.1,GeneID:4807717;Name=YP_001035808.1;Note=GC: 37.85%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.774. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035808.1;transl_table=11
NC_009009.1	RefSeq	gene	1872033	1872290	.	-	.	ID=gene1851;Dbxref=GeneID:4808012;Name=SSA_1878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1878
NC_009009.1	RefSeq	CDS	1872033	1872290	.	-	0	ID=cds1788;Parent=gene1851;Dbxref=Genbank:YP_001035809.1,GeneID:4808012;Name=YP_001035809.1;Note=GC: 44.19%25%3B Codon Adaptation Index (CAI): 0.841.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035809.1;transl_table=11
NC_009009.1	RefSeq	gene	1872313	1874352	.	-	.	ID=gene1852;Dbxref=GeneID:4807956;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SSA_1879
NC_009009.1	RefSeq	CDS	1872313	1874352	.	-	0	ID=cds1789;Parent=gene1852;Dbxref=Genbank:YP_001035810.1,GeneID:4807956;Name=YP_001035810.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase subunit beta;protein_id=YP_001035810.1;transl_table=11
NC_009009.1	RefSeq	gene	1874355	1875272	.	-	.	ID=gene1853;Dbxref=GeneID:4807501;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=SSA_1880
NC_009009.1	RefSeq	CDS	1874355	1875272	.	-	0	ID=cds1790;Parent=gene1853;Dbxref=Genbank:YP_001035811.1,GeneID:4807501;Name=YP_001035811.1;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyQ;product=glycyl-tRNA synthetase subunit alpha;protein_id=YP_001035811.1;transl_table=11
NC_009009.1	RefSeq	gene	1875293	1876054	.	-	.	ID=gene1854;Dbxref=GeneID:4806906;Name=SSA_1881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1881
NC_009009.1	RefSeq	CDS	1875293	1876054	.	-	0	ID=cds1791;Parent=gene1854;Dbxref=Genbank:YP_001035812.1,GeneID:4806906;Name=YP_001035812.1;Note=GC: 39.5%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035812.1;transl_table=11
NC_009009.1	RefSeq	gene	1876367	1880887	.	-	.	ID=gene1855;Dbxref=GeneID:4807047;Name=prtS;gbkey=Gene;gene=prtS;gene_biotype=protein_coding;locus_tag=SSA_1882
NC_009009.1	RefSeq	CDS	1876367	1880887	.	-	0	ID=cds1792;Parent=gene1855;Dbxref=Genbank:YP_001035813.1,GeneID:4807047;Name=YP_001035813.1;Note=GC: 47.93%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.785. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=prtS;product=subtilisin-like serine proteases;protein_id=YP_001035813.1;transl_table=11
NC_009009.1	RefSeq	gene	1881664	1882392	.	-	.	ID=gene1856;Dbxref=GeneID:4806930;Name=SSA_1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1883
NC_009009.1	RefSeq	CDS	1881664	1882392	.	-	0	ID=cds1793;Parent=gene1856;Dbxref=Genbank:YP_001035814.1,GeneID:4806930;Name=YP_001035814.1;Note=GC: 28.26%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035814.1;transl_table=11
NC_009009.1	RefSeq	gene	1882395	1883054	.	-	.	ID=gene1857;Dbxref=GeneID:4806934;Name=SSA_1884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1884
NC_009009.1	RefSeq	CDS	1882395	1883054	.	-	0	ID=cds1794;Parent=gene1857;Dbxref=Genbank:YP_001035815.1,GeneID:4806934;Name=YP_001035815.1;Note=GC: 30.45%25%3B Codon Adaptation Index (CAI): 0.749. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035815.1;transl_table=11
NC_009009.1	RefSeq	gene	1883106	1885190	.	-	.	ID=gene1858;Dbxref=GeneID:4806670;Name=SSA_1885;Note=Conserved hypothetical protein. GC: 28.06%25. Codon Adaptation Index (CAI): 0.757. GO:0016787 (Function: hydrolase activity)%2C GO:0005524 (Function: ATP binding).;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SSA_1885;pseudo=true
NC_009009.1	RefSeq	gene	1885180	1886115	.	-	.	ID=gene1859;Dbxref=GeneID:4806166;Name=SSA_1888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1888
NC_009009.1	RefSeq	CDS	1885180	1886115	.	-	0	ID=cds1795;Parent=gene1859;Dbxref=Genbank:YP_001035816.1,GeneID:4806166;Name=YP_001035816.1;Note=GC: 26.39%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035816.1;transl_table=11
NC_009009.1	RefSeq	gene	1886373	1887212	.	-	.	ID=gene1860;Dbxref=GeneID:4807739;Name=SSA_1889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1889
NC_009009.1	RefSeq	CDS	1886373	1887212	.	-	0	ID=cds1796;Parent=gene1860;Dbxref=Genbank:YP_001035817.1,GeneID:4807739;Name=YP_001035817.1;Note=GC: 47.26%25%3B Codon Adaptation Index (CAI): 0.753. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035817.1;transl_table=11
NC_009009.1	RefSeq	gene	1887783	1888235	.	-	.	ID=gene1861;Dbxref=GeneID:4807238;Name=SSA_1890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1890
NC_009009.1	RefSeq	CDS	1887783	1888235	.	-	0	ID=cds1797;Parent=gene1861;Dbxref=Genbank:YP_001035818.1,GeneID:4807238;Name=YP_001035818.1;Note=GC: 44.15%25%3B Codon Adaptation Index (CAI): 0.753.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035818.1;transl_table=11
NC_009009.1	RefSeq	gene	1888236	1889081	.	-	.	ID=gene1862;Dbxref=GeneID:4807331;Name=SSA_1891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1891
NC_009009.1	RefSeq	CDS	1888236	1889081	.	-	0	ID=cds1798;Parent=gene1862;Dbxref=Genbank:YP_001035819.1,GeneID:4807331;Name=YP_001035819.1;Note=GC: 51.89%25%3B Codon Adaptation Index (CAI): 0.754. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=aldo/keto reductase;protein_id=YP_001035819.1;transl_table=11
NC_009009.1	RefSeq	gene	1889158	1889352	.	-	.	ID=gene1863;Dbxref=GeneID:4807300;Name=SSA_1892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1892
NC_009009.1	RefSeq	CDS	1889158	1889352	.	-	0	ID=cds1799;Parent=gene1863;Dbxref=Genbank:YP_001035820.1,GeneID:4807300;Name=YP_001035820.1;Note=GC: 37.44%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.721. SignalP prediction: Yes (prob. 0.999).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035820.1;transl_table=11
NC_009009.1	RefSeq	gene	1889511	1890662	.	-	.	ID=gene1864;Dbxref=GeneID:4808076;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SSA_1893
NC_009009.1	RefSeq	CDS	1889511	1890662	.	-	0	ID=cds1800;Parent=gene1864;Dbxref=Genbank:YP_001035821.1,GeneID:4808076;Name=YP_001035821.1;Note=GC: 48.7%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_001035821.1;transl_table=11
NC_009009.1	RefSeq	gene	1890905	1891255	.	-	.	ID=gene1865;Dbxref=GeneID:4807091;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SSA_1895
NC_009009.1	RefSeq	CDS	1890905	1891255	.	-	0	ID=cds1801;Parent=gene1865;Dbxref=Genbank:YP_001035822.1,GeneID:4807091;Name=YP_001035822.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=YP_001035822.1;transl_table=11
NC_009009.1	RefSeq	gene	1891432	1894224	.	-	.	ID=gene1866;Dbxref=GeneID:4807434;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SSA_1896
NC_009009.1	RefSeq	CDS	1891432	1894224	.	-	0	ID=cds1802;Parent=gene1866;Dbxref=Genbank:YP_001035823.1,GeneID:4807434;Name=YP_001035823.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=YP_001035823.1;transl_table=11
NC_009009.1	RefSeq	gene	1894244	1894540	.	-	.	ID=gene1867;Dbxref=GeneID:4806937;Name=SSA_1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1897
NC_009009.1	RefSeq	CDS	1894244	1894540	.	-	0	ID=cds1803;Parent=gene1867;Dbxref=Genbank:YP_001035824.1,GeneID:4806937;Name=YP_001035824.1;Note=GC: 44.78%25%3B Codon Adaptation Index (CAI): 0.804. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035824.1;transl_table=11
NC_009009.1	RefSeq	gene	1894533	1894829	.	-	.	ID=gene1868;Dbxref=GeneID:4807408;Name=SSA_1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1899
NC_009009.1	RefSeq	CDS	1894533	1894829	.	-	0	ID=cds1804;Parent=gene1868;Dbxref=Genbank:YP_001035825.1,GeneID:4807408;Name=YP_001035825.1;Note=GC: 44.44%25%3B Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035825.1;transl_table=11
NC_009009.1	RefSeq	gene	1894840	1896102	.	-	.	ID=gene1869;Dbxref=GeneID:4806367;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SSA_1900
NC_009009.1	RefSeq	CDS	1894840	1896102	.	-	0	ID=cds1805;Parent=gene1869;Dbxref=Genbank:YP_001035826.1,GeneID:4806367;Name=YP_001035826.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=YP_001035826.1;transl_table=11
NC_009009.1	RefSeq	gene	1896156	1896689	.	-	.	ID=gene1870;Dbxref=GeneID:4806071;Name=SSA_1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1901
NC_009009.1	RefSeq	CDS	1896156	1896689	.	-	0	ID=cds1806;Parent=gene1870;Dbxref=Genbank:YP_001035827.1,GeneID:4806071;Name=YP_001035827.1;Note=in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035827.1;transl_table=11
NC_009009.1	RefSeq	gene	1896843	1897481	.	-	.	ID=gene1871;Dbxref=GeneID:4806278;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=SSA_1902
NC_009009.1	RefSeq	CDS	1896843	1897481	.	-	0	ID=cds1807;Parent=gene1871;Dbxref=Genbank:YP_001035828.1,GeneID:4806278;Name=YP_001035828.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=YP_001035828.1;transl_table=11
NC_009009.1	RefSeq	gene	1897478	1898272	.	-	.	ID=gene1872;Dbxref=GeneID:4805788;Name=SSA_1903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1903
NC_009009.1	RefSeq	CDS	1897478	1898272	.	-	0	ID=cds1808;Parent=gene1872;Dbxref=Genbank:YP_001035829.1,GeneID:4805788;Name=YP_001035829.1;Note=GC: 47.55%25%3B Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035829.1;transl_table=11
NC_009009.1	RefSeq	gene	1898323	1899369	.	-	.	ID=gene1873;Dbxref=GeneID:4805876;Name=SSA_1904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1904
NC_009009.1	RefSeq	CDS	1898323	1899369	.	-	0	ID=cds1809;Parent=gene1873;Dbxref=Genbank:YP_001035830.1,GeneID:4805876;Name=YP_001035830.1;Note=GC: 44.32%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.767. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=YP_001035830.1;transl_table=11
NC_009009.1	RefSeq	gene	1899366	1900163	.	-	.	ID=gene1874;Dbxref=GeneID:4806674;Name=SSA_1905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1905
NC_009009.1	RefSeq	CDS	1899366	1900163	.	-	0	ID=cds1810;Parent=gene1874;Dbxref=Genbank:YP_001035831.1,GeneID:4806674;Name=YP_001035831.1;Note=GC: 44.99%25%3B Transporter classification TC:3.A.1.126.1. Codon Adaptation Index (CAI): 0.774. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001035831.1;transl_table=11
NC_009009.1	RefSeq	gene	1900166	1900576	.	+	.	ID=gene1875;Dbxref=GeneID:4807869;Name=hit;gbkey=Gene;gene=hit;gene_biotype=protein_coding;locus_tag=SSA_1906
NC_009009.1	RefSeq	CDS	1900166	1900576	.	+	0	ID=cds1811;Parent=gene1875;Dbxref=Genbank:YP_001035832.1,GeneID:4807869;Name=YP_001035832.1;Note=GC: 44.77%25%3B Codon Adaptation Index (CAI): 0.802. Curator(s): J. Alves;gbkey=CDS;gene=hit;product=diadenosine tetraphosphate (Ap4A) hydrolase;protein_id=YP_001035832.1;transl_table=11
NC_009009.1	RefSeq	gene	1900586	1900873	.	+	.	ID=gene1876;Dbxref=GeneID:4806221;Name=SSA_1907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1907
NC_009009.1	RefSeq	CDS	1900586	1900873	.	+	0	ID=cds1812;Parent=gene1876;Dbxref=Genbank:YP_001035833.1,GeneID:4806221;Name=YP_001035833.1;Note=GC: 37.15%25%3B Codon Adaptation Index (CAI): 0.755.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035833.1;transl_table=11
NC_009009.1	RefSeq	gene	1900994	1902232	.	-	.	ID=gene1877;Dbxref=GeneID:4806869;Name=SSA_1909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1909
NC_009009.1	RefSeq	CDS	1900994	1902232	.	-	0	ID=cds1813;Parent=gene1877;Dbxref=Genbank:YP_001035834.1,GeneID:4806869;Name=YP_001035834.1;Note=GC: 44.71%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.813. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.997). Capsular polysaccharide biosynthesis transcriptional attenuator. Curator(s): J. Alves;gbkey=CDS;product=LytR family transcriptional regulator;protein_id=YP_001035834.1;transl_table=11
NC_009009.1	RefSeq	gene	1902241	1902762	.	-	.	ID=gene1878;Dbxref=GeneID:4806148;Name=SSA_1910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1910
NC_009009.1	RefSeq	CDS	1902241	1902762	.	-	0	ID=cds1814;Parent=gene1878;Dbxref=Genbank:YP_001035835.1,GeneID:4806148;Name=YP_001035835.1;Note=GC: 41.38%25%3B Codon Adaptation Index (CAI): 0.788.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035835.1;transl_table=11
NC_009009.1	RefSeq	gene	1902755	1903195	.	-	.	ID=gene1879;Dbxref=GeneID:4806531;Name=SSA_1911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1911
NC_009009.1	RefSeq	CDS	1902755	1903195	.	-	0	ID=cds1815;Parent=gene1879;Dbxref=Genbank:YP_001035836.1,GeneID:4806531;Name=YP_001035836.1;Note=GC: 46.71%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035836.1;transl_table=11
NC_009009.1	RefSeq	gene	1903203	1903310	.	-	.	ID=gene1880;Dbxref=GeneID:4807578;Name=SSA_1912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1912
NC_009009.1	RefSeq	CDS	1903203	1903310	.	-	0	ID=cds1816;Parent=gene1880;Dbxref=Genbank:YP_001035837.1,GeneID:4807578;Name=YP_001035837.1;Note=GC: 27.78%25%3B Codon Adaptation Index (CAI): 0.746.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035837.1;transl_table=11
NC_009009.1	RefSeq	gene	1903335	1904756	.	-	.	ID=gene1881;Dbxref=GeneID:4806575;Name=SSA_1913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1913
NC_009009.1	RefSeq	CDS	1903335	1904756	.	-	0	ID=cds1817;Parent=gene1881;Dbxref=Genbank:YP_001035838.1,GeneID:4806575;Name=YP_001035838.1;Note=GC: 46.13%25%3B Transporter classification TC:2.A.1.40.1. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.773. Curator(s): J. Alves;gbkey=CDS;product=xanthine/uracil permease family protein;protein_id=YP_001035838.1;transl_table=11
NC_009009.1	RefSeq	gene	1904902	1905285	.	-	.	ID=gene1882;Dbxref=GeneID:4807676;Name=SSA_1914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1914
NC_009009.1	RefSeq	CDS	1904902	1905285	.	-	0	ID=cds1818;Parent=gene1882;Dbxref=Genbank:YP_001035839.1,GeneID:4807676;Name=YP_001035839.1;Note=GC: 38.8%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.82.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035839.1;transl_table=11
NC_009009.1	RefSeq	gene	1905366	1905530	.	-	.	ID=gene1883;Dbxref=GeneID:4806018;Name=SSA_1915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1915
NC_009009.1	RefSeq	CDS	1905366	1905530	.	-	0	ID=cds1819;Parent=gene1883;Dbxref=Genbank:YP_001035840.1,GeneID:4806018;Name=YP_001035840.1;Note=GC: 41.21%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035840.1;transl_table=11
NC_009009.1	RefSeq	gene	1905627	1906439	.	+	.	ID=gene1884;Dbxref=GeneID:4805774;Name=SSA_1916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1916
NC_009009.1	RefSeq	CDS	1905627	1906439	.	+	0	ID=cds1820;Parent=gene1884;Dbxref=Genbank:YP_001035841.1,GeneID:4805774;Name=YP_001035841.1;Note=GC: 44.03%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035841.1;transl_table=11
NC_009009.1	RefSeq	gene	1906657	1907676	.	+	.	ID=gene1885;Dbxref=GeneID:4806642;Name=adh;gbkey=Gene;gene=adh;gene_biotype=protein_coding;gene_synonym=adhA,adhP;locus_tag=SSA_1917
NC_009009.1	RefSeq	CDS	1906657	1907676	.	+	0	ID=cds1821;Parent=gene1885;Dbxref=Genbank:YP_001035842.1,GeneID:4806642;Name=YP_001035842.1;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adh;product=alcohol dehydrogenase;protein_id=YP_001035842.1;transl_table=11
NC_009009.1	RefSeq	gene	1908129	1909133	.	+	.	ID=gene1886;Dbxref=GeneID:4806154;Name=SSA_1918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1918
NC_009009.1	RefSeq	CDS	1908129	1909133	.	+	0	ID=cds1822;Parent=gene1886;Dbxref=Genbank:YP_001035843.1,GeneID:4806154;Name=YP_001035843.1;Note=GC: 45.97%25%3B Transporter classification TC:4.A.6.1.1. Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;product=phosphotransferase system%2C mannose-specific EIIAB;protein_id=YP_001035843.1;transl_table=11
NC_009009.1	RefSeq	gene	1909178	1909984	.	+	.	ID=gene1887;Dbxref=GeneID:4806313;Name=SSA_1919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1919
NC_009009.1	RefSeq	CDS	1909178	1909984	.	+	0	ID=cds1823;Parent=gene1887;Dbxref=Genbank:YP_001035844.1,GeneID:4806313;Name=YP_001035844.1;Note=GC: 47.58%25%3B Transporter classification TC:4.A.6.1.1. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.799. SignalP prediction: Yes (prob. 0.707).;gbkey=CDS;product=phosphotransferase system%2C mannose-specific EIIC;protein_id=YP_001035844.1;transl_table=11
NC_009009.1	RefSeq	gene	1910003	1910944	.	+	.	ID=gene1888;Dbxref=GeneID:4806607;Name=SSA_1920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1920
NC_009009.1	RefSeq	CDS	1910003	1910944	.	+	0	ID=cds1824;Parent=gene1888;Dbxref=Genbank:YP_001035845.1,GeneID:4806607;Name=YP_001035845.1;Note=GC: 42.36%25%3B Transporter classification TC:4.A.6.1.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.798.;gbkey=CDS;product=phosphotransferase system%2C mannose-specific EIID;protein_id=YP_001035845.1;transl_table=11
NC_009009.1	RefSeq	gene	1911015	1911377	.	+	.	ID=gene1889;Dbxref=GeneID:4806709;Name=SSA_1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1921
NC_009009.1	RefSeq	CDS	1911015	1911377	.	+	0	ID=cds1825;Parent=gene1889;Dbxref=Genbank:YP_001035846.1,GeneID:4806709;Name=YP_001035846.1;Note=GC: 40.5%25%3B Codon Adaptation Index (CAI): 0.814. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035846.1;transl_table=11
NC_009009.1	RefSeq	gene	1911564	1912196	.	-	.	ID=gene1890;Dbxref=GeneID:4805834;Name=SSA_1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1922
NC_009009.1	RefSeq	CDS	1911564	1912196	.	-	0	ID=cds1826;Parent=gene1890;Dbxref=Genbank:YP_001035847.1,GeneID:4805834;Name=YP_001035847.1;Note=GC: 41.39%25%3B Codon Adaptation Index (CAI): 0.795.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035847.1;transl_table=11
NC_009009.1	RefSeq	gene	1912210	1912788	.	-	.	ID=gene1891;Dbxref=GeneID:4806081;Name=SSA_1923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1923
NC_009009.1	RefSeq	CDS	1912210	1912788	.	-	0	ID=cds1827;Parent=gene1891;Dbxref=Genbank:YP_001035848.1,GeneID:4806081;Name=YP_001035848.1;Note=GC: 40.59%25%3B Codon Adaptation Index (CAI): 0.817.;gbkey=CDS;product=NADPH-quinone reductase;protein_id=YP_001035848.1;transl_table=11
NC_009009.1	RefSeq	gene	1912781	1913338	.	-	.	ID=gene1892;Dbxref=GeneID:4805821;Name=SSA_1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1924
NC_009009.1	RefSeq	CDS	1912781	1913338	.	-	0	ID=cds1828;Parent=gene1892;Dbxref=Genbank:YP_001035849.1,GeneID:4805821;Name=YP_001035849.1;Note=GC: 42.29%25%3B Codon Adaptation Index (CAI): 0.777. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001035849.1;transl_table=11
NC_009009.1	RefSeq	gene	1913648	1914925	.	+	.	ID=gene1893;Dbxref=GeneID:4806420;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=SSA_1925
NC_009009.1	RefSeq	CDS	1913648	1914925	.	+	0	ID=cds1829;Parent=gene1893;Dbxref=Genbank:YP_001035850.1,GeneID:4806420;Name=YP_001035850.1;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=YP_001035850.1;transl_table=11
NC_009009.1	RefSeq	gene	1914969	1915094	.	+	.	ID=gene1894;Dbxref=GeneID:4806260;Name=SSA_1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1926
NC_009009.1	RefSeq	CDS	1914969	1915094	.	+	0	ID=cds1830;Parent=gene1894;Dbxref=Genbank:YP_001035851.1,GeneID:4806260;Name=YP_001035851.1;Note=GC: 31.75%25%3B Codon Adaptation Index (CAI): 0.825.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035851.1;transl_table=11
NC_009009.1	RefSeq	gene	1915046	1915963	.	-	.	ID=gene1895;Dbxref=GeneID:4805983;Name=shetA;gbkey=Gene;gene=shetA;gene_biotype=protein_coding;locus_tag=SSA_1927
NC_009009.1	RefSeq	CDS	1915046	1915963	.	-	0	ID=cds1831;Parent=gene1895;Dbxref=Genbank:YP_001035852.1,GeneID:4805983;Name=YP_001035852.1;Note=GC: 45.21%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.731.;gbkey=CDS;gene=shetA;product=exfoliative toxin;protein_id=YP_001035852.1;transl_table=11
NC_009009.1	RefSeq	gene	1916036	1917100	.	-	.	ID=gene1896;Dbxref=GeneID:4806410;Name=SSA_1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1928
NC_009009.1	RefSeq	CDS	1916036	1917100	.	-	0	ID=cds1832;Parent=gene1896;Dbxref=Genbank:YP_001035853.1,GeneID:4806410;Name=YP_001035853.1;Note=GC: 47.89%25%3B Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_001035853.1;transl_table=11
NC_009009.1	RefSeq	gene	1917119	1917679	.	-	.	ID=gene1897;Dbxref=GeneID:4805922;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=SSA_1929
NC_009009.1	RefSeq	CDS	1917119	1917679	.	-	0	ID=cds1833;Parent=gene1897;Dbxref=Genbank:YP_001035854.1,GeneID:4805922;Name=YP_001035854.1;Note=GC: 45.81%25%3B Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;gene=mip;product=macrophage infectivity potentiator protein;protein_id=YP_001035854.1;transl_table=11
NC_009009.1	RefSeq	gene	1917867	1918637	.	-	.	ID=gene1898;Dbxref=GeneID:4806258;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=SSA_1930
NC_009009.1	RefSeq	CDS	1917867	1918637	.	-	0	ID=cds1834;Parent=gene1898;Dbxref=Genbank:YP_001035855.1,GeneID:4806258;Name=YP_001035855.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein%3B these proteins present a shorter N-terminus;gbkey=CDS;gene=accA;product=acetyl-CoA carboxylase subunit alpha;protein_id=YP_001035855.1;transl_table=11
NC_009009.1	RefSeq	gene	1918634	1919497	.	-	.	ID=gene1899;Dbxref=GeneID:4806000;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=SSA_1931
NC_009009.1	RefSeq	CDS	1918634	1919497	.	-	0	ID=cds1835;Parent=gene1899;Dbxref=Genbank:YP_001035856.1,GeneID:4806000;Name=YP_001035856.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;gene=accD;product=acetyl-CoA carboxylase subunit beta;protein_id=YP_001035856.1;transl_table=11
NC_009009.1	RefSeq	gene	1919597	1920964	.	-	.	ID=gene1900;Dbxref=GeneID:4806443;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=SSA_1932
NC_009009.1	RefSeq	CDS	1919597	1920964	.	-	0	ID=cds1836;Parent=gene1900;Dbxref=Genbank:YP_001035857.1,GeneID:4806443;Name=YP_001035857.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;gene=accC;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=YP_001035857.1;transl_table=11
NC_009009.1	RefSeq	gene	1920983	1921405	.	-	.	ID=gene1901;Dbxref=GeneID:4805999;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=SSA_1933
NC_009009.1	RefSeq	CDS	1920983	1921405	.	-	0	ID=cds1837;Parent=gene1901;Dbxref=Genbank:YP_001035858.1,GeneID:4805999;Name=YP_001035858.1;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP;gbkey=CDS;gene=fabZ;product=(3R)-hydroxymyristoyl-ACP dehydratase;protein_id=YP_001035858.1;transl_table=11
NC_009009.1	RefSeq	gene	1921402	1921890	.	-	.	ID=gene1902;Dbxref=GeneID:4805942;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=SSA_1934
NC_009009.1	RefSeq	CDS	1921402	1921890	.	-	0	ID=cds1838;Parent=gene1902;Dbxref=Genbank:YP_001035859.1,GeneID:4805942;Name=YP_001035859.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;gene=accB;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=YP_001035859.1;transl_table=11
NC_009009.1	RefSeq	gene	1921897	1923129	.	-	.	ID=gene1903;Dbxref=GeneID:4806359;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=SSA_1935
NC_009009.1	RefSeq	CDS	1921897	1923129	.	-	0	ID=cds1839;Parent=gene1903;Dbxref=Genbank:YP_001035860.1,GeneID:4806359;Name=YP_001035860.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;gene=fabF;product=3-oxoacyl-ACP synthase;protein_id=YP_001035860.1;transl_table=11
NC_009009.1	RefSeq	gene	1923194	1923928	.	-	.	ID=gene1904;Dbxref=GeneID:4806588;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SSA_1936
NC_009009.1	RefSeq	CDS	1923194	1923928	.	-	0	ID=cds1840;Parent=gene1904;Dbxref=Genbank:YP_001035861.1,GeneID:4806588;Name=YP_001035861.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=YP_001035861.1;transl_table=11
NC_009009.1	RefSeq	gene	1923941	1924861	.	-	.	ID=gene1905;Dbxref=GeneID:4806412;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=SSA_1937
NC_009009.1	RefSeq	CDS	1923941	1924861	.	-	0	ID=cds1841;Parent=gene1905;Dbxref=Genbank:YP_001035862.1,GeneID:4806412;Name=YP_001035862.1;Note=GC: 44.95%25%3B Codon Adaptation Index (CAI): 0.784.;gbkey=CDS;gene=fabD;product=malonyl-CoA:ACP transacylase;protein_id=YP_001035862.1;transl_table=11
NC_009009.1	RefSeq	gene	1924854	1925828	.	-	.	ID=gene1906;Dbxref=GeneID:4806719;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=SSA_1938
NC_009009.1	RefSeq	CDS	1924854	1925828	.	-	0	ID=cds1842;Parent=gene1906;Dbxref=Genbank:YP_001035863.1,GeneID:4806719;Name=YP_001035863.1;Note=GC: 46.77%25%3B Codon Adaptation Index (CAI): 0.801.;gbkey=CDS;gene=fabK;product=enoyl-acyl carrier protein(ACP) reductase;protein_id=YP_001035863.1;transl_table=11
NC_009009.1	RefSeq	gene	1925965	1926189	.	-	.	ID=gene1907;Dbxref=GeneID:4806802;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=SSA_1939
NC_009009.1	RefSeq	CDS	1925965	1926189	.	-	0	ID=cds1843;Parent=gene1907;Dbxref=Genbank:YP_001035864.1,GeneID:4806802;Name=YP_001035864.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=YP_001035864.1;transl_table=11
NC_009009.1	RefSeq	gene	1926245	1927219	.	-	.	ID=gene1908;Dbxref=GeneID:4806841;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=SSA_1940
NC_009009.1	RefSeq	CDS	1926245	1927219	.	-	0	ID=cds1844;Parent=gene1908;Dbxref=Genbank:YP_001035865.1,GeneID:4806841;Name=YP_001035865.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=fabH;product=3-oxoacyl-ACP synthase;protein_id=YP_001035865.1;transl_table=11
NC_009009.1	RefSeq	gene	1927219	1927542	.	-	.	ID=gene1909;Dbxref=GeneID:4806127;Name=SSA_1941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1941
NC_009009.1	RefSeq	CDS	1927219	1927542	.	-	0	ID=cds1845;Parent=gene1909;Dbxref=Genbank:YP_001035866.1,GeneID:4806127;Name=YP_001035866.1;Note=GC: 44.75%25%3B Codon Adaptation Index (CAI): 0.736.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035866.1;transl_table=11
NC_009009.1	RefSeq	gene	1927795	1928586	.	-	.	ID=gene1910;Dbxref=GeneID:4806625;Name=phaB;gbkey=Gene;gene=phaB;gene_biotype=protein_coding;locus_tag=SSA_1942
NC_009009.1	RefSeq	CDS	1927795	1928586	.	-	0	ID=cds1846;Parent=gene1910;Dbxref=Genbank:YP_001035867.1,GeneID:4806625;Name=YP_001035867.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;gene=phaB;product=enoyl-CoA hydratase;protein_id=YP_001035867.1;transl_table=11
NC_009009.1	RefSeq	gene	1928837	1930219	.	+	.	ID=gene1911;Dbxref=GeneID:4806494;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=SSA_1943
NC_009009.1	RefSeq	CDS	1928837	1930219	.	+	0	ID=cds1847;Parent=gene1911;Dbxref=Genbank:YP_001035868.1,GeneID:4806494;Name=YP_001035868.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B lysine and threonine sensitive;gbkey=CDS;gene=lysC;product=aspartate kinase;protein_id=YP_001035868.1;transl_table=11
NC_009009.1	RefSeq	gene	1930449	1930522	.	-	.	ID=gene1912;Dbxref=GeneID:4807421;Name=SSA_2454;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2454
NC_009009.1	RefSeq	tRNA	1930449	1930522	.	-	.	ID=rna61;Parent=gene1912;Dbxref=GeneID:4807421;Note=tRNA-Asn_3;gbkey=tRNA;product=tRNA-Asn
NC_009009.1	RefSeq	exon	1930449	1930522	.	-	.	ID=id62;Parent=rna61;Dbxref=GeneID:4807421;Note=tRNA-Asn_3;gbkey=tRNA;product=tRNA-Asn
NC_009009.1	RefSeq	gene	1930528	1930643	.	-	.	ID=gene1913;Dbxref=GeneID:4806535;Name=SSA_2411;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2411
NC_009009.1	RefSeq	rRNA	1930528	1930643	.	-	.	ID=rna62;Parent=gene1913;Dbxref=GeneID:4806535;Note=rRNA_5S_4;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	exon	1930528	1930643	.	-	.	ID=id63;Parent=rna62;Dbxref=GeneID:4806535;Note=rRNA_5S_4;gbkey=rRNA;product=5S ribosomal RNA
NC_009009.1	RefSeq	gene	1930762	1933660	.	-	.	ID=gene1914;Dbxref=GeneID:4806784;Name=SSA_2407;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2407
NC_009009.1	RefSeq	rRNA	1930762	1933660	.	-	.	ID=rna63;Parent=gene1914;Dbxref=GeneID:4806784;Note=rRNA_23S_4;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	exon	1930762	1933660	.	-	.	ID=id64;Parent=rna63;Dbxref=GeneID:4806784;Note=rRNA_23S_4;gbkey=rRNA;product=23S large subunit ribosomal RNA
NC_009009.1	RefSeq	gene	1933787	1933859	.	-	.	ID=gene1915;Dbxref=GeneID:4807155;Name=SSA_2453;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2453
NC_009009.1	RefSeq	tRNA	1933787	1933859	.	-	.	ID=rna64;Parent=gene1915;Dbxref=GeneID:4807155;Note=tRNA-Ala_3;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	exon	1933787	1933859	.	-	.	ID=id65;Parent=rna64;Dbxref=GeneID:4807155;Note=tRNA-Ala_3;gbkey=tRNA;product=tRNA-Ala
NC_009009.1	RefSeq	gene	1933921	1935471	.	-	.	ID=gene1916;Dbxref=GeneID:4807368;Name=SSA_2403;gbkey=Gene;gene_biotype=rRNA;locus_tag=SSA_2403
NC_009009.1	RefSeq	rRNA	1933921	1935471	.	-	.	ID=rna65;Parent=gene1916;Dbxref=GeneID:4807368;Note=rRNA_16S_4;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	exon	1933921	1935471	.	-	.	ID=id66;Parent=rna65;Dbxref=GeneID:4807368;Note=rRNA_16S_4;gbkey=rRNA;product=16S small subunit ribosomal RNA
NC_009009.1	RefSeq	gene	1935775	1936701	.	-	.	ID=gene1917;Dbxref=GeneID:4806727;Name=SSA_1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1944
NC_009009.1	RefSeq	CDS	1935775	1936701	.	-	0	ID=cds1848;Parent=gene1917;Dbxref=Genbank:YP_001035869.1,GeneID:4806727;Name=YP_001035869.1;Note=GC: 40.78%25%3B Transporter classification TC:3.A.1.5.1. Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;product=oligopeptide transport ATP-binding protein;protein_id=YP_001035869.1;transl_table=11
NC_009009.1	RefSeq	gene	1936712	1937779	.	-	.	ID=gene1918;Dbxref=GeneID:4805934;Name=SSA_1945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1945
NC_009009.1	RefSeq	CDS	1936712	1937779	.	-	0	ID=cds1849;Parent=gene1918;Dbxref=Genbank:YP_001035870.1,GeneID:4805934;Name=YP_001035870.1;Note=GC: 43.45%25%3B Transporter classification TC:3.A.1.5.2. Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=oligopeptide transport ATP-binding protein;protein_id=YP_001035870.1;transl_table=11
NC_009009.1	RefSeq	gene	1937788	1938714	.	-	.	ID=gene1919;Dbxref=GeneID:4807405;Name=SSA_1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1946
NC_009009.1	RefSeq	CDS	1937788	1938714	.	-	0	ID=cds1850;Parent=gene1919;Dbxref=Genbank:YP_001035871.1,GeneID:4807405;Name=YP_001035871.1;Note=GC: 40.99%25%3B Transporter classification TC:3.A.1.5.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.796.;gbkey=CDS;product=oligopeptide transport system permease;protein_id=YP_001035871.1;transl_table=11
NC_009009.1	RefSeq	gene	1938714	1940210	.	-	.	ID=gene1920;Dbxref=GeneID:4807955;Name=SSA_1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1947
NC_009009.1	RefSeq	CDS	1938714	1940210	.	-	0	ID=cds1851;Parent=gene1920;Dbxref=Genbank:YP_001035872.1,GeneID:4807955;Name=YP_001035872.1;Note=GC: 41.42%25%3B Transporter classification TC:3.A.1.5.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.816. SignalP prediction: Yes (prob. 0.769).;gbkey=CDS;product=oligopeptide transport system permease;protein_id=YP_001035872.1;transl_table=11
NC_009009.1	RefSeq	gene	1940275	1942260	.	-	.	ID=gene1921;Dbxref=GeneID:4806977;Name=SSA_1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1948
NC_009009.1	RefSeq	CDS	1940275	1942260	.	-	0	ID=cds1852;Parent=gene1921;Dbxref=Genbank:YP_001035873.1,GeneID:4806977;Name=YP_001035873.1;Note=GC: 41.44%25%3B Transporter classification TC:3.A.1.5.2. Codon Adaptation Index (CAI): 0.799. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=oligopeptide-binding lipoprotein;protein_id=YP_001035873.1;transl_table=11
NC_009009.1	RefSeq	gene	1942493	1944463	.	-	.	ID=gene1922;Dbxref=GeneID:4807310;Name=SSA_1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1949
NC_009009.1	RefSeq	CDS	1942493	1944463	.	-	0	ID=cds1853;Parent=gene1922;Dbxref=Genbank:YP_001035874.1,GeneID:4807310;Name=YP_001035874.1;Note=GC: 42.87%25%3B Transporter classification TC:3.A.1.5.2. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.805. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=AliA protein;protein_id=YP_001035874.1;transl_table=11
NC_009009.1	RefSeq	gene	1944656	1946617	.	-	.	ID=gene1923;Dbxref=GeneID:4806743;Name=SSA_1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1950
NC_009009.1	RefSeq	CDS	1944656	1946617	.	-	0	ID=cds1854;Parent=gene1923;Dbxref=Genbank:YP_001035875.1,GeneID:4806743;Name=YP_001035875.1;Note=GC: 41.23%25%3B Transporter classification TC:3.A.1.5.2. Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter periplasmic protein;protein_id=YP_001035875.1;transl_table=11
NC_009009.1	RefSeq	gene	1946904	1948163	.	+	.	ID=gene1924;Dbxref=GeneID:4806918;Name=pbp3;gbkey=Gene;gene=pbp3;gene_biotype=protein_coding;locus_tag=SSA_1951
NC_009009.1	RefSeq	CDS	1946904	1948163	.	+	0	ID=cds1855;Parent=gene1924;Dbxref=Genbank:YP_001035876.1,GeneID:4806918;Name=YP_001035876.1;Note=GC: 45.63%25%3B Codon Adaptation Index (CAI): 0.763. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=pbp3;product=penicillin-binding protein 3;protein_id=YP_001035876.1;transl_table=11
NC_009009.1	RefSeq	gene	1948302	1949714	.	-	.	ID=gene1925;Dbxref=GeneID:4807210;Name=SSA_1952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1952
NC_009009.1	RefSeq	CDS	1948302	1949714	.	-	0	ID=cds1856;Parent=gene1925;Dbxref=Genbank:YP_001035877.1,GeneID:4807210;Name=YP_001035877.1;Note=GC: 45.72%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001035877.1;transl_table=11
NC_009009.1	RefSeq	gene	1949732	1950169	.	-	.	ID=gene1926;Dbxref=GeneID:4807072;Name=nifU;gbkey=Gene;gene=nifU;gene_biotype=protein_coding;locus_tag=SSA_1953
NC_009009.1	RefSeq	CDS	1949732	1950169	.	-	0	ID=cds1857;Parent=gene1926;Dbxref=Genbank:YP_001035878.1,GeneID:4807072;Name=YP_001035878.1;Note=GC: 48.63%25%3B Codon Adaptation Index (CAI): 0.757.;gbkey=CDS;gene=nifU;product=NifU family protein;protein_id=YP_001035878.1;transl_table=11
NC_009009.1	RefSeq	gene	1950156	1951388	.	-	.	ID=gene1927;Dbxref=GeneID:4807400;Name=SSA_1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1954
NC_009009.1	RefSeq	CDS	1950156	1951388	.	-	0	ID=cds1858;Parent=gene1927;Dbxref=Genbank:YP_001035879.1,GeneID:4807400;Name=YP_001035879.1;Note=GC: 49.8%25%3B Codon Adaptation Index (CAI): 0.765.;gbkey=CDS;product=class V aminotransferase;protein_id=YP_001035879.1;transl_table=11
NC_009009.1	RefSeq	gene	1951430	1952692	.	-	.	ID=gene1928;Dbxref=GeneID:4807264;Name=SSA_1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1955
NC_009009.1	RefSeq	CDS	1951430	1952692	.	-	0	ID=cds1859;Parent=gene1928;Dbxref=Genbank:YP_001035880.1,GeneID:4807264;Name=YP_001035880.1;Note=GC: 46.56%25%3B Codon Adaptation Index (CAI): 0.808. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001035880.1;transl_table=11
NC_009009.1	RefSeq	gene	1952734	1953504	.	-	.	ID=gene1929;Dbxref=GeneID:4807145;Name=SSA_1956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1956
NC_009009.1	RefSeq	CDS	1952734	1953504	.	-	0	ID=cds1860;Parent=gene1929;Dbxref=Genbank:YP_001035881.1,GeneID:4807145;Name=YP_001035881.1;Note=GC: 45.4%25%3B Codon Adaptation Index (CAI): 0.818. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_001035881.1;transl_table=11
NC_009009.1	RefSeq	gene	1953594	1954760	.	-	.	ID=gene1930;Dbxref=GeneID:4807785;Name=rgpG;gbkey=Gene;gene=rgpG;gene_biotype=protein_coding;locus_tag=SSA_1957
NC_009009.1	RefSeq	CDS	1953594	1954760	.	-	0	ID=cds1861;Parent=gene1930;Dbxref=Genbank:YP_001035882.1,GeneID:4807785;Name=YP_001035882.1;Note=GC: 45.42%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.752. SignalP prediction: Yes (prob. 0.958).;gbkey=CDS;gene=rgpG;product=glycosyl transferase N-acetylglucosaminyltransferase;protein_id=YP_001035882.1;transl_table=11
NC_009009.1	RefSeq	gene	1954751	1955503	.	-	.	ID=gene1931;Dbxref=GeneID:4807737;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=SSA_1958
NC_009009.1	RefSeq	CDS	1954751	1955503	.	-	0	ID=cds1862;Parent=gene1931;Dbxref=Genbank:YP_001035883.1,GeneID:4807737;Name=YP_001035883.1;Note=enables recognition and targeting of proteins for proteolysis%2C involved in negative regulation of competence;gbkey=CDS;gene=mecA;product=adaptor protein;protein_id=YP_001035883.1;transl_table=11
NC_009009.1	RefSeq	gene	1955679	1956521	.	-	.	ID=gene1932;Dbxref=GeneID:4807023;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=SSA_1959
NC_009009.1	RefSeq	CDS	1955679	1956521	.	-	0	ID=cds1863;Parent=gene1932;Dbxref=Genbank:YP_001035884.1,GeneID:4807023;Name=YP_001035884.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;gene=bacA;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_001035884.1;transl_table=11
NC_009009.1	RefSeq	gene	1956661	1958556	.	-	.	ID=gene1933;Dbxref=GeneID:4806935;Name=SSA_1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1960
NC_009009.1	RefSeq	CDS	1956661	1958556	.	-	0	ID=cds1864;Parent=gene1933;Dbxref=Genbank:YP_001035885.1,GeneID:4806935;Name=YP_001035885.1;Note=GC: 46.26%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035885.1;transl_table=11
NC_009009.1	RefSeq	gene	1958688	1960253	.	+	.	ID=gene1934;Dbxref=GeneID:4807045;Name=SSA_1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1961
NC_009009.1	RefSeq	CDS	1958688	1960253	.	+	0	ID=cds1865;Parent=gene1934;Dbxref=Genbank:YP_001035886.1,GeneID:4807045;Name=YP_001035886.1;Note=GC: 45.4%25%3B Transporter classification TC:3.A.1.3.12. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_001035886.1;transl_table=11
NC_009009.1	RefSeq	gene	1960250	1960990	.	+	.	ID=gene1935;Dbxref=GeneID:4807336;Name=SSA_1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1962
NC_009009.1	RefSeq	CDS	1960250	1960990	.	+	0	ID=cds1866;Parent=gene1935;Dbxref=Genbank:YP_001035887.1,GeneID:4807336;Name=YP_001035887.1;Note=GC: 47.64%25%3B Transporter classification TC:3.A.1.3.13. Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=YP_001035887.1;transl_table=11
NC_009009.1	RefSeq	gene	1961086	1961301	.	-	.	ID=gene1936;Dbxref=GeneID:4806853;Name=SSA_1964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1964
NC_009009.1	RefSeq	CDS	1961086	1961301	.	-	0	ID=cds1867;Parent=gene1936;Dbxref=Genbank:YP_001035888.1,GeneID:4806853;Name=YP_001035888.1;Note=GC: 35.19%25%3B Codon Adaptation Index (CAI): 0.839. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035888.1;transl_table=11
NC_009009.1	RefSeq	gene	1961410	1962342	.	-	.	ID=gene1937;Dbxref=GeneID:4807513;Name=SSA_1965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1965
NC_009009.1	RefSeq	CDS	1961410	1962342	.	-	0	ID=cds1868;Parent=gene1937;Dbxref=Genbank:YP_001035889.1,GeneID:4807513;Name=YP_001035889.1;Note=GC: 42.55%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;product=stomatin/prohibitin-like membrane protease subunits;protein_id=YP_001035889.1;transl_table=11
NC_009009.1	RefSeq	gene	1962399	1963649	.	-	.	ID=gene1938;Dbxref=GeneID:4807226;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=SSA_1967
NC_009009.1	RefSeq	CDS	1962399	1963649	.	-	0	ID=cds1869;Parent=gene1938;Dbxref=Genbank:YP_001035890.1,GeneID:4807226;Name=YP_001035890.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B biosynthetic;gbkey=CDS;gene=ilvA;product=threonine dehydratase;protein_id=YP_001035890.1;transl_table=11
NC_009009.1	RefSeq	gene	1963749	1964771	.	-	.	ID=gene1939;Dbxref=GeneID:4806899;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=SSA_1968
NC_009009.1	RefSeq	CDS	1963749	1964771	.	-	0	ID=cds1870;Parent=gene1939;Dbxref=Genbank:YP_001035891.1,GeneID:4806899;Name=YP_001035891.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=YP_001035891.1;transl_table=11
NC_009009.1	RefSeq	gene	1964836	1965312	.	-	.	ID=gene1940;Dbxref=GeneID:4807907;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=SSA_1969
NC_009009.1	RefSeq	CDS	1964836	1965312	.	-	0	ID=cds1871;Parent=gene1940;Dbxref=Genbank:YP_001035892.1,GeneID:4807907;Name=YP_001035892.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase 3 regulatory subunit;protein_id=YP_001035892.1;transl_table=11
NC_009009.1	RefSeq	gene	1965305	1967005	.	-	.	ID=gene1941;Dbxref=GeneID:4808033;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=SSA_1970
NC_009009.1	RefSeq	CDS	1965305	1967005	.	-	0	ID=cds1872;Parent=gene1941;Dbxref=Genbank:YP_001035893.1,GeneID:4808033;Name=YP_001035893.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;gene=ilvB;product=acetolactate synthase catalytic subunit;protein_id=YP_001035893.1;transl_table=11
NC_009009.1	RefSeq	gene	1967307	1967657	.	+	.	ID=gene1942;Dbxref=GeneID:4807611;Name=SSA_1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1971
NC_009009.1	RefSeq	CDS	1967307	1967657	.	+	0	ID=cds1873;Parent=gene1942;Dbxref=Genbank:YP_001035894.1,GeneID:4807611;Name=YP_001035894.1;Note=GC: 36.18%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.75.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035894.1;transl_table=11
NC_009009.1	RefSeq	gene	1967901	1968500	.	-	.	ID=gene1943;Dbxref=GeneID:4807666;Name=SSA_1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1972
NC_009009.1	RefSeq	CDS	1967901	1968500	.	-	0	ID=cds1874;Parent=gene1943;Dbxref=Genbank:YP_001035895.1,GeneID:4807666;Name=YP_001035895.1;Note=GC: 47.67%25%3B Codon Adaptation Index (CAI): 0.738. Curator(s): J. Alves;gbkey=CDS;product=two-component response transcriptional regulator;protein_id=YP_001035895.1;transl_table=11
NC_009009.1	RefSeq	gene	1968497	1969597	.	-	.	ID=gene1944;Dbxref=GeneID:4807551;Name=SSA_1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1973
NC_009009.1	RefSeq	CDS	1968497	1969597	.	-	0	ID=cds1875;Parent=gene1944;Dbxref=Genbank:YP_001035896.1,GeneID:4807551;Name=YP_001035896.1;Note=GC: 42.78%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;product=histidine kinase;protein_id=YP_001035896.1;transl_table=11
NC_009009.1	RefSeq	gene	1969602	1970336	.	-	.	ID=gene1945;Dbxref=GeneID:4807951;Name=SSA_1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1974
NC_009009.1	RefSeq	CDS	1969602	1970336	.	-	0	ID=cds1876;Parent=gene1945;Dbxref=Genbank:YP_001035897.1,GeneID:4807951;Name=YP_001035897.1;Note=GC: 41.63%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=YP_001035897.1;transl_table=11
NC_009009.1	RefSeq	gene	1970347	1971222	.	-	.	ID=gene1946;Dbxref=GeneID:4807571;Name=SSA_1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1975
NC_009009.1	RefSeq	CDS	1970347	1971222	.	-	0	ID=cds1877;Parent=gene1946;Dbxref=Genbank:YP_001035898.1,GeneID:4807571;Name=YP_001035898.1;Note=GC: 43.26%25%3B Transporter classification TC:3.A.1.102.1. Codon Adaptation Index (CAI): 0.788. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001035898.1;transl_table=11
NC_009009.1	RefSeq	gene	1971640	1972248	.	-	.	ID=gene1947;Dbxref=GeneID:4807495;Name=SSA_1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1976
NC_009009.1	RefSeq	CDS	1971640	1972248	.	-	0	ID=cds1878;Parent=gene1947;Dbxref=Genbank:YP_001035899.1,GeneID:4807495;Name=YP_001035899.1;Note=GC: 40.72%25%3B Codon Adaptation Index (CAI): 0.815. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035899.1;transl_table=11
NC_009009.1	RefSeq	gene	1972359	1974023	.	-	.	ID=gene1948;Dbxref=GeneID:4807870;Name=SSA_1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1978
NC_009009.1	RefSeq	CDS	1972359	1974023	.	-	0	ID=cds1879;Parent=gene1948;Dbxref=Genbank:YP_001035900.1,GeneID:4807870;Name=YP_001035900.1;Note=GC: 46.31%25%3B Codon Adaptation Index (CAI): 0.802. Curator(s): J. Alves;gbkey=CDS;product=dihydroxyacetone kinase family protein;protein_id=YP_001035900.1;transl_table=11
NC_009009.1	RefSeq	gene	1974026	1974391	.	-	.	ID=gene1949;Dbxref=GeneID:4807736;Name=asp;gbkey=Gene;gene=asp;gene_biotype=protein_coding;locus_tag=SSA_1979
NC_009009.1	RefSeq	CDS	1974026	1974391	.	-	0	ID=cds1880;Parent=gene1949;Dbxref=Genbank:YP_001035901.1,GeneID:4807736;Name=YP_001035901.1;Note=GC: 39.34%25%3B Codon Adaptation Index (CAI): 0.797. Curator(s): J. Alves;gbkey=CDS;gene=asp;product=alkaline-shock protein;protein_id=YP_001035901.1;transl_table=11
NC_009009.1	RefSeq	gene	1974534	1974722	.	-	.	ID=gene1950;Dbxref=GeneID:4807819;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SSA_1980
NC_009009.1	RefSeq	CDS	1974534	1974722	.	-	0	ID=cds1881;Parent=gene1950;Dbxref=Genbank:YP_001035902.1,GeneID:4807819;Name=YP_001035902.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=YP_001035902.1;transl_table=11
NC_009009.1	RefSeq	gene	1974849	1975511	.	-	.	ID=gene1951;Dbxref=GeneID:4807752;Name=SSA_1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1981
NC_009009.1	RefSeq	CDS	1974849	1975511	.	-	0	ID=cds1882;Parent=gene1951;Dbxref=Genbank:YP_001035903.1,GeneID:4807752;Name=YP_001035903.1;Note=GC: 41.63%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 0.702).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035903.1;transl_table=11
NC_009009.1	RefSeq	gene	1975517	1975963	.	-	.	ID=gene1952;Dbxref=GeneID:4807908;Name=SSA_1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1982
NC_009009.1	RefSeq	CDS	1975517	1975963	.	-	0	ID=cds1883;Parent=gene1952;Dbxref=Genbank:YP_001035904.1,GeneID:4807908;Name=YP_001035904.1;Note=GC: 41.39%25%3B Codon Adaptation Index (CAI): 0.745. Curator(s): J. Alves;gbkey=CDS;product=LytR/AlgR family transcriptional regulator;protein_id=YP_001035904.1;transl_table=11
NC_009009.1	RefSeq	gene	1976138	1979125	.	-	.	ID=gene1953;Dbxref=GeneID:4807552;Name=SSA_1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1984
NC_009009.1	RefSeq	CDS	1976138	1979125	.	-	0	ID=cds1884;Parent=gene1953;Dbxref=Genbank:YP_001035905.1,GeneID:4807552;Name=YP_001035905.1;Note=GC: 44.95%25%3B Codon Adaptation Index (CAI): 0.758. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=cell surface SD repeat-containing protein;protein_id=YP_001035905.1;transl_table=11
NC_009009.1	RefSeq	gene	1979713	1981863	.	-	.	ID=gene1954;Dbxref=GeneID:4807703;Name=SSA_1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1985
NC_009009.1	RefSeq	CDS	1979713	1981863	.	-	0	ID=cds1885;Parent=gene1954;Dbxref=Genbank:YP_001035906.1,GeneID:4807703;Name=YP_001035906.1;Note=GC: 43.24%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.751. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035906.1;transl_table=11
NC_009009.1	RefSeq	gene	1982039	1982111	.	-	.	ID=gene1955;Dbxref=GeneID:4807704;Name=SSA_2452;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2452
NC_009009.1	RefSeq	tRNA	1982039	1982111	.	-	.	ID=rna66;Parent=gene1955;Dbxref=GeneID:4807704;Note=tRNA-Thr_2;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	exon	1982039	1982111	.	-	.	ID=id67;Parent=rna66;Dbxref=GeneID:4807704;Note=tRNA-Thr_2;gbkey=tRNA;product=tRNA-Thr
NC_009009.1	RefSeq	gene	1982163	1982621	.	-	.	ID=gene1956;Dbxref=GeneID:4807683;Name=SSA_1986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1986
NC_009009.1	RefSeq	CDS	1982163	1982621	.	-	0	ID=cds1886;Parent=gene1956;Dbxref=Genbank:YP_001035907.1,GeneID:4807683;Name=YP_001035907.1;Note=GC: 38.13%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001035907.1;transl_table=11
NC_009009.1	RefSeq	gene	1982673	1983458	.	-	.	ID=gene1957;Dbxref=GeneID:4807195;Name=SSA_1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1987
NC_009009.1	RefSeq	CDS	1982673	1983458	.	-	0	ID=cds1887;Parent=gene1957;Dbxref=Genbank:YP_001035908.1,GeneID:4807195;Name=YP_001035908.1;Note=GC: 40.08%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.753.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035908.1;transl_table=11
NC_009009.1	RefSeq	gene	1983460	1984278	.	-	.	ID=gene1958;Dbxref=GeneID:4807811;Name=SSA_1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1988
NC_009009.1	RefSeq	CDS	1983460	1984278	.	-	0	ID=cds1888;Parent=gene1958;Dbxref=Genbank:YP_001035909.1,GeneID:4807811;Name=YP_001035909.1;Note=GC: 40.66%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.76. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001035909.1;transl_table=11
NC_009009.1	RefSeq	gene	1984280	1985272	.	-	.	ID=gene1959;Dbxref=GeneID:4807136;Name=SSA_1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1989
NC_009009.1	RefSeq	CDS	1984280	1985272	.	-	0	ID=cds1889;Parent=gene1959;Dbxref=Genbank:YP_001035910.1,GeneID:4807136;Name=YP_001035910.1;Note=GC: 44.51%25%3B Transporter classification TC:3.A.1.23.2. Codon Adaptation Index (CAI): 0.785. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_001035910.1;transl_table=11
NC_009009.1	RefSeq	gene	1985492	1986409	.	-	.	ID=gene1960;Dbxref=GeneID:4805824;Name=SSA_1990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1990
NC_009009.1	RefSeq	CDS	1985492	1986409	.	-	0	ID=cds1890;Parent=gene1960;Dbxref=Genbank:YP_001035911.1,GeneID:4805824;Name=YP_001035911.1;Note=GC: 39.32%25%3B Transporter classification TC:3.A.1.15.3. Codon Adaptation Index (CAI): 0.778. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.999)%3B Curator(s): J. Alves;gbkey=CDS;product=Zn-porter lipoprotein;protein_id=YP_001035911.1;transl_table=11
NC_009009.1	RefSeq	gene	1986430	1988862	.	-	.	ID=gene1961;Dbxref=GeneID:4807033;Name=phtA;gbkey=Gene;gene=phtA;gene_biotype=protein_coding;locus_tag=SSA_1991
NC_009009.1	RefSeq	CDS	1986430	1988862	.	-	0	ID=cds1891;Parent=gene1961;Dbxref=Genbank:YP_001035912.1,GeneID:4807033;Name=YP_001035912.1;Note=GC: 39.29%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.789. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.453).;gbkey=CDS;gene=phtA;product=histidine triad protein A;protein_id=YP_001035912.1;transl_table=11
NC_009009.1	RefSeq	gene	1989181	1990062	.	-	.	ID=gene1962;Dbxref=GeneID:4806643;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=SSA_1992
NC_009009.1	RefSeq	CDS	1989181	1990062	.	-	0	ID=cds1892;Parent=gene1962;Dbxref=Genbank:YP_001035913.1,GeneID:4806643;Name=YP_001035913.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;gene=fba;product=fructose-bisphosphate aldolase;protein_id=YP_001035913.1;transl_table=11
NC_009009.1	RefSeq	gene	1990237	1990325	.	-	.	ID=gene1963;Dbxref=GeneID:4806117;Name=SSA_2451;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2451
NC_009009.1	RefSeq	tRNA	1990237	1990325	.	-	.	ID=rna67;Parent=gene1963;Dbxref=GeneID:4806117;Note=tRNA-Leu_5;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	1990237	1990325	.	-	.	ID=id68;Parent=rna67;Dbxref=GeneID:4806117;Note=tRNA-Leu_5;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	1990470	1990880	.	-	.	ID=gene1964;Dbxref=GeneID:4806288;Name=SSA_1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1993
NC_009009.1	RefSeq	CDS	1990470	1990880	.	-	0	ID=cds1893;Parent=gene1964;Dbxref=Genbank:YP_001035914.1,GeneID:4806288;Name=YP_001035914.1;Note=GC: 43.55%25%3B Codon Adaptation Index (CAI): 0.758. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035914.1;transl_table=11
NC_009009.1	RefSeq	gene	1990951	1992564	.	-	.	ID=gene1965;Dbxref=GeneID:4807579;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SSA_1994
NC_009009.1	RefSeq	CDS	1990951	1992564	.	-	0	ID=cds1894;Parent=gene1965;Dbxref=Genbank:YP_001035915.1,GeneID:4807579;Name=YP_001035915.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=YP_001035915.1;transl_table=11
NC_009009.1	RefSeq	gene	1992762	1993448	.	-	.	ID=gene1966;Dbxref=GeneID:4807304;Name=SSA_1995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1995
NC_009009.1	RefSeq	CDS	1992762	1993448	.	-	0	ID=cds1895;Parent=gene1966;Dbxref=Genbank:YP_001035916.1,GeneID:4807304;Name=YP_001035916.1;Note=GC: 43.81%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035916.1;transl_table=11
NC_009009.1	RefSeq	gene	1993569	1994114	.	-	.	ID=gene1967;Dbxref=GeneID:4806057;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=SSA_1996
NC_009009.1	RefSeq	CDS	1993569	1994114	.	-	0	ID=cds1896;Parent=gene1967;Dbxref=Genbank:YP_001035917.1,GeneID:4806057;Name=YP_001035917.1;Note=participates in both the initiation and recycling phases of transcription%3B in the presence of the delta subunit%2C RNAP displays an increased specificity of transcription%2C a decreased affinity for nucleic acids%2C and an increased efficiency of RNA synthesis because of enhanced recycling;gbkey=CDS;gene=rpoE;product=DNA-directed RNA polymerase subunit delta;protein_id=YP_001035917.1;transl_table=11
NC_009009.1	RefSeq	gene	1994252	1995001	.	-	.	ID=gene1968;Dbxref=GeneID:4806192;Name=SSA_1997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1997
NC_009009.1	RefSeq	CDS	1994252	1995001	.	-	0	ID=cds1897;Parent=gene1968;Dbxref=Genbank:YP_001035918.1,GeneID:4806192;Name=YP_001035918.1;Note=GC: 37.87%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.756. SignalP prediction: Yes (prob. 0.705).;gbkey=CDS;product=membrane spanning protein;protein_id=YP_001035918.1;transl_table=11
NC_009009.1	RefSeq	gene	1995138	1996421	.	-	.	ID=gene1969;Dbxref=GeneID:4805836;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=SSA_1998
NC_009009.1	RefSeq	CDS	1995138	1996421	.	-	0	ID=cds1898;Parent=gene1969;Dbxref=Genbank:YP_001035919.1,GeneID:4805836;Name=YP_001035919.1;Note=Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;gbkey=CDS;gene=tig;product=trigger factor;protein_id=YP_001035919.1;transl_table=11
NC_009009.1	RefSeq	gene	1996501	1997064	.	-	.	ID=gene1970;Dbxref=GeneID:4806622;Name=SSA_1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_1999
NC_009009.1	RefSeq	CDS	1996501	1997064	.	-	0	ID=cds1899;Parent=gene1970;Dbxref=Genbank:YP_001035920.1,GeneID:4806622;Name=YP_001035920.1;Note=GC: 48.4%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035920.1;transl_table=11
NC_009009.1	RefSeq	gene	1997077	1997559	.	-	.	ID=gene1971;Dbxref=GeneID:4806256;Name=SSA_2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2000
NC_009009.1	RefSeq	CDS	1997077	1997559	.	-	0	ID=cds1900;Parent=gene1971;Dbxref=Genbank:YP_001035921.1,GeneID:4806256;Name=YP_001035921.1;Note=GC: 44.72%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.758. SignalP prediction: Yes (prob. 0.865).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035921.1;transl_table=11
NC_009009.1	RefSeq	gene	1997540	1998310	.	-	.	ID=gene1972;Dbxref=GeneID:4805964;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=SSA_2001
NC_009009.1	RefSeq	CDS	1997540	1998310	.	-	0	ID=cds1901;Parent=gene1972;Dbxref=Genbank:YP_001035922.1,GeneID:4805964;Name=YP_001035922.1;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;gbkey=CDS;gene=thiD;product=phosphomethylpyrimidine kinase;protein_id=YP_001035922.1;transl_table=11
NC_009009.1	RefSeq	gene	1998300	1999049	.	-	.	ID=gene1973;Dbxref=GeneID:4805820;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=SSA_2002
NC_009009.1	RefSeq	CDS	1998300	1999049	.	-	0	ID=cds1902;Parent=gene1973;Dbxref=Genbank:YP_001035923.1,GeneID:4805820;Name=YP_001035923.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=YP_001035923.1;transl_table=11
NC_009009.1	RefSeq	gene	1999306	2005020	.	-	.	ID=gene1974;Dbxref=GeneID:4805770;Name=zmpB;gbkey=Gene;gene=zmpB;gene_biotype=protein_coding;locus_tag=SSA_2004
NC_009009.1	RefSeq	CDS	1999306	2005020	.	-	0	ID=cds1903;Parent=gene1974;Dbxref=Genbank:YP_001035924.1,GeneID:4805770;Name=YP_001035924.1;Note=GC: 46.16%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.781. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=zmpB;product=Zinc metalloprotease zmpB;protein_id=YP_001035924.1;transl_table=11
NC_009009.1	RefSeq	gene	2005341	2006474	.	-	.	ID=gene1975;Dbxref=GeneID:4806026;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=SSA_2005
NC_009009.1	RefSeq	CDS	2005341	2006474	.	-	0	ID=cds1904;Parent=gene1975;Dbxref=Genbank:YP_001035925.1,GeneID:4806026;Name=YP_001035925.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;gene=dnaJ;product=molecular chaperone DnaJ;protein_id=YP_001035925.1;transl_table=11
NC_009009.1	RefSeq	gene	2006673	2007305	.	-	.	ID=gene1976;Dbxref=GeneID:4807249;Name=SSA_2006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2006
NC_009009.1	RefSeq	CDS	2006673	2007305	.	-	0	ID=cds1905;Parent=gene1976;Dbxref=Genbank:YP_001035926.1,GeneID:4807249;Name=YP_001035926.1;Note=GC: 36.49%25%3B Codon Adaptation Index (CAI): 0.757.;gbkey=CDS;product=4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein;protein_id=YP_001035926.1;transl_table=11
NC_009009.1	RefSeq	gene	2007533	2009362	.	-	.	ID=gene1977;Dbxref=GeneID:4807998;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SSA_2007
NC_009009.1	RefSeq	CDS	2007533	2009362	.	-	0	ID=cds1906;Parent=gene1977;Dbxref=Genbank:YP_001035927.1,GeneID:4807998;Name=YP_001035927.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=YP_001035927.1;transl_table=11
NC_009009.1	RefSeq	gene	2009616	2010152	.	-	.	ID=gene1978;Dbxref=GeneID:4806146;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=SSA_2008
NC_009009.1	RefSeq	CDS	2009616	2010152	.	-	0	ID=cds1907;Parent=gene1978;Dbxref=Genbank:YP_001035928.1,GeneID:4806146;Name=YP_001035928.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;gene=grpE;product=heat shock protein GrpE;protein_id=YP_001035928.1;transl_table=11
NC_009009.1	RefSeq	gene	2010188	2011222	.	-	.	ID=gene1979;Dbxref=GeneID:4806189;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=SSA_2009
NC_009009.1	RefSeq	CDS	2010188	2011222	.	-	0	ID=cds1908;Parent=gene1979;Dbxref=Genbank:YP_001035929.1,GeneID:4806189;Name=YP_001035929.1;Note=Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons;gbkey=CDS;gene=hrcA;product=heat-inducible transcription repressor;protein_id=YP_001035929.1;transl_table=11
NC_009009.1	RefSeq	gene	2011386	2012114	.	-	.	ID=gene1980;Dbxref=GeneID:4807689;Name=SSA_2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2010
NC_009009.1	RefSeq	CDS	2011386	2012114	.	-	0	ID=cds1909;Parent=gene1980;Dbxref=Genbank:YP_001035930.1,GeneID:4807689;Name=YP_001035930.1;Note=GC: 37.86%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.8. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=YP_001035930.1;transl_table=11
NC_009009.1	RefSeq	gene	2012107	2012946	.	-	.	ID=gene1981;Dbxref=GeneID:4807101;Name=SSA_2011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2011
NC_009009.1	RefSeq	CDS	2012107	2012946	.	-	0	ID=cds1910;Parent=gene1981;Dbxref=Genbank:YP_001035931.1,GeneID:4807101;Name=YP_001035931.1;Note=GC: 42.86%25%3B Transporter classification TC:3.A.1.124.1. Codon Adaptation Index (CAI): 0.811. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_001035931.1;transl_table=11
NC_009009.1	RefSeq	gene	2012988	2013560	.	-	.	ID=gene1982;Dbxref=GeneID:4806301;Name=SSA_2012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2012
NC_009009.1	RefSeq	CDS	2012988	2013560	.	-	0	ID=cds1911;Parent=gene1982;Dbxref=Genbank:YP_001035932.1,GeneID:4806301;Name=YP_001035932.1;Note=GC: 39.79%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.781. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035932.1;transl_table=11
NC_009009.1	RefSeq	gene	2013560	2013883	.	-	.	ID=gene1983;Dbxref=GeneID:4806233;Name=SSA_2013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2013
NC_009009.1	RefSeq	CDS	2013560	2013883	.	-	0	ID=cds1912;Parent=gene1983;Dbxref=Genbank:YP_001035933.1,GeneID:4806233;Name=YP_001035933.1;Note=GC: 41.98%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035933.1;transl_table=11
NC_009009.1	RefSeq	gene	2014109	2014897	.	-	.	ID=gene1984;Dbxref=GeneID:4806444;Name=SSA_2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2014
NC_009009.1	RefSeq	CDS	2014109	2014897	.	-	0	ID=cds1913;Parent=gene1984;Dbxref=Genbank:YP_001035934.1,GeneID:4806444;Name=YP_001035934.1;Note=GC: 47.28%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_001035934.1;transl_table=11
NC_009009.1	RefSeq	gene	2014884	2015582	.	-	.	ID=gene1985;Dbxref=GeneID:4806056;Name=SSA_2015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2015
NC_009009.1	RefSeq	CDS	2014884	2015582	.	-	0	ID=cds1914;Parent=gene1985;Dbxref=Genbank:YP_001035935.1,GeneID:4806056;Name=YP_001035935.1;Note=GC: 49.36%25%3B Codon Adaptation Index (CAI): 0.799. Curator(s): J. Alves;gbkey=CDS;product=phosphoglycerate mutase;protein_id=YP_001035935.1;transl_table=11
NC_009009.1	RefSeq	gene	2015682	2016383	.	-	.	ID=gene1986;Dbxref=GeneID:4806207;Name=SSA_2016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2016
NC_009009.1	RefSeq	CDS	2015682	2016383	.	-	0	ID=cds1915;Parent=gene1986;Dbxref=Genbank:YP_001035936.1,GeneID:4806207;Name=YP_001035936.1;Note=GC: 50.28%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=phosphoglycerate mutase;protein_id=YP_001035936.1;transl_table=11
NC_009009.1	RefSeq	gene	2016525	2017421	.	-	.	ID=gene1987;Dbxref=GeneID:4805777;Name=SSA_2017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2017
NC_009009.1	RefSeq	CDS	2016525	2017421	.	-	0	ID=cds1916;Parent=gene1987;Dbxref=Genbank:YP_001035937.1,GeneID:4805777;Name=YP_001035937.1;Note=GC: 43.14%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.756. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035937.1;transl_table=11
NC_009009.1	RefSeq	gene	2017554	2018891	.	-	.	ID=gene1988;Dbxref=GeneID:4805896;Name=SSA_2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2018
NC_009009.1	RefSeq	CDS	2017554	2018891	.	-	0	ID=cds1917;Parent=gene1988;Dbxref=Genbank:YP_001035938.1,GeneID:4805896;Name=YP_001035938.1;Note=GC: 49.93%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035938.1;transl_table=11
NC_009009.1	RefSeq	gene	2018902	2019168	.	-	.	ID=gene1989;Dbxref=GeneID:4806027;Name=SSA_2019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2019
NC_009009.1	RefSeq	CDS	2018902	2019168	.	-	0	ID=cds1918;Parent=gene1989;Dbxref=Genbank:YP_001035939.1,GeneID:4806027;Name=YP_001035939.1;Note=ACT domain-containing protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035939.1;transl_table=11
NC_009009.1	RefSeq	gene	2019424	2022531	.	+	.	ID=gene1990;Dbxref=GeneID:4806631;Name=SSA_2020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2020
NC_009009.1	RefSeq	CDS	2019424	2022531	.	+	0	ID=cds1919;Parent=gene1990;Dbxref=Genbank:YP_001035940.1,GeneID:4806631;Name=YP_001035940.1;Note=GC: 49.45%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.78. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035940.1;transl_table=11
NC_009009.1	RefSeq	gene	2022590	2023624	.	-	.	ID=gene1991;Dbxref=GeneID:4806456;Name=SSA_2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2021
NC_009009.1	RefSeq	CDS	2022590	2023624	.	-	0	ID=cds1920;Parent=gene1991;Dbxref=Genbank:YP_001035941.1,GeneID:4806456;Name=YP_001035941.1;Note=GC: 44.93%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035941.1;transl_table=11
NC_009009.1	RefSeq	gene	2023712	2024548	.	+	.	ID=gene1992;Dbxref=GeneID:4806329;Name=SSA_2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2022
NC_009009.1	RefSeq	CDS	2023712	2024548	.	+	0	ID=cds1921;Parent=gene1992;Dbxref=Genbank:YP_001035942.1,GeneID:4806329;Name=YP_001035942.1;Note=GC: 40.14%25%3B Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=YP_001035942.1;transl_table=11
NC_009009.1	RefSeq	gene	2024699	2028916	.	-	.	ID=gene1993;Dbxref=GeneID:4805995;Name=SSA_2023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2023
NC_009009.1	RefSeq	CDS	2024699	2028916	.	-	0	ID=cds1922;Parent=gene1993;Dbxref=Genbank:YP_001035943.1,GeneID:4805995;Name=YP_001035943.1;Note=GC: 46.44%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.779. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999).;gbkey=CDS;product=fructan beta-fructosidase;protein_id=YP_001035943.1;transl_table=11
NC_009009.1	RefSeq	gene	2029195	2029362	.	-	.	ID=gene1994;Dbxref=GeneID:4806194;Name=SSA_2024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2024
NC_009009.1	RefSeq	CDS	2029195	2029362	.	-	0	ID=cds1923;Parent=gene1994;Dbxref=Genbank:YP_001035944.1,GeneID:4806194;Name=YP_001035944.1;Note=GC: 45.24%25%3B Codon Adaptation Index (CAI): 0.735.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035944.1;transl_table=11
NC_009009.1	RefSeq	gene	2029936	2031072	.	+	.	ID=gene1995;Dbxref=GeneID:4806059;Name=SSA_2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2025
NC_009009.1	RefSeq	CDS	2029936	2031072	.	+	0	ID=cds1924;Parent=gene1995;Dbxref=Genbank:YP_001035945.1,GeneID:4806059;Name=YP_001035945.1;Note=GC: 37.2%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.766. Curator(s): J. Alves;gbkey=CDS;product=GTPase protein;protein_id=YP_001035945.1;transl_table=11
NC_009009.1	RefSeq	gene	2031757	2031912	.	-	.	ID=gene1996;Dbxref=GeneID:4806079;Name=SSA_2388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2388
NC_009009.1	RefSeq	CDS	2031757	2031912	.	-	0	ID=cds1925;Parent=gene1996;Dbxref=Genbank:YP_001035946.1,GeneID:4806079;Name=YP_001035946.1;Note=GC: 27.56%25%3B Codon Adaptation Index (CAI): 0.729. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035946.1;transl_table=11
NC_009009.1	RefSeq	gene	2031935	2032303	.	-	.	ID=gene1997;Dbxref=GeneID:4805925;Name=SSA_2387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2387
NC_009009.1	RefSeq	CDS	2031935	2032303	.	-	0	ID=cds1926;Parent=gene1997;Dbxref=Genbank:YP_001035947.1,GeneID:4805925;Name=YP_001035947.1;Note=GC: 32.52%25%3B Codon Adaptation Index (CAI): 0.701. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=arsenical resistance operon transcription repressor;protein_id=YP_001035947.1;transl_table=11
NC_009009.1	RefSeq	gene	2031935	2032273	.	-	.	ID=gene1998;Dbxref=GeneID:4805830;Name=SSA_2389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2389
NC_009009.1	RefSeq	CDS	2031935	2032273	.	-	0	ID=cds1927;Parent=gene1998;Dbxref=Genbank:YP_001035948.1,GeneID:4805830;Name=YP_001035948.1;Note=GC: 31.86%25%3B Codon Adaptation Index (CAI): 0.704. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=arsenical resistance operon transcription repressor;protein_id=YP_001035948.1;transl_table=11
NC_009009.1	RefSeq	gene	2032285	2032911	.	-	.	ID=gene1999;Dbxref=GeneID:4805954;Name=cadD1;gbkey=Gene;gene=cadD1;gene_biotype=protein_coding;locus_tag=SSA_2026
NC_009009.1	RefSeq	CDS	2032285	2032911	.	-	0	ID=cds1928;Parent=gene1999;Dbxref=Genbank:YP_001035949.1,GeneID:4805954;Name=YP_001035949.1;Note=GC: 33.97%25%3B Transporter classification TC:2.A.77.1.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.744. Curator(s): J. Alves;gbkey=CDS;gene=cadD1;product=cadmium resistance transporter;protein_id=YP_001035949.1;transl_table=11
NC_009009.1	RefSeq	gene	2033199	2035262	.	-	.	ID=gene2000;Dbxref=GeneID:4806083;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=SSA_2027
NC_009009.1	RefSeq	CDS	2033199	2035262	.	-	0	ID=cds1929;Parent=gene2000;Dbxref=Genbank:YP_001035950.1,GeneID:4806083;Name=YP_001035950.1;Note=GC: 37.4%25%3B Transporter classification TC:3.A.3.5.1. Codon Adaptation Index (CAI): 0.768.;gbkey=CDS;gene=copA;product=P-type ATPase-metal/cation transport;protein_id=YP_001035950.1;transl_table=11
NC_009009.1	RefSeq	gene	2035264	2035542	.	-	.	ID=gene2001;Dbxref=GeneID:4806069;Name=SSA_2028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2028
NC_009009.1	RefSeq	CDS	2035264	2035542	.	-	0	ID=cds1930;Parent=gene2001;Dbxref=Genbank:YP_001035951.1,GeneID:4806069;Name=YP_001035951.1;Note=GC: 36.92%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.781. SignalP prediction: Yes (prob. 0.871)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035951.1;transl_table=11
NC_009009.1	RefSeq	gene	2035723	2036118	.	-	.	ID=gene2002;Dbxref=GeneID:4808037;Name=SSA_2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2029
NC_009009.1	RefSeq	CDS	2035723	2036118	.	-	0	ID=cds1931;Parent=gene2002;Dbxref=Genbank:YP_001035952.1,GeneID:4808037;Name=YP_001035952.1;Note=GC: 36.36%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=transposase;protein_id=YP_001035952.1;transl_table=11
NC_009009.1	RefSeq	gene	2036604	2036840	.	-	.	ID=gene2003;Dbxref=GeneID:4806159;Name=SSA_2030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2030
NC_009009.1	RefSeq	CDS	2036604	2036840	.	-	0	ID=cds1932;Parent=gene2003;Dbxref=Genbank:YP_001035953.1,GeneID:4806159;Name=YP_001035953.1;Note=GC: 32.49%25%3B Codon Adaptation Index (CAI): 0.765.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035953.1;transl_table=11
NC_009009.1	RefSeq	gene	2037293	2037901	.	+	.	ID=gene2004;Dbxref=GeneID:4806511;Name=SSA_2031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2031
NC_009009.1	RefSeq	CDS	2037293	2037901	.	+	0	ID=cds1933;Parent=gene2004;Dbxref=Genbank:YP_001035954.1,GeneID:4806511;Name=YP_001035954.1;Note=GC: 46.63%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.785. Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035954.1;transl_table=11
NC_009009.1	RefSeq	gene	2038146	2038367	.	+	.	ID=gene2005;Dbxref=GeneID:4807440;Name=SSA_2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2032
NC_009009.1	RefSeq	CDS	2038146	2038367	.	+	0	ID=cds1934;Parent=gene2005;Dbxref=Genbank:YP_001035955.1,GeneID:4807440;Name=YP_001035955.1;Note=GC: 36.49%25%3B Codon Adaptation Index (CAI): 0.781. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=phage integrase family integrase/recombinase;protein_id=YP_001035955.1;transl_table=11
NC_009009.1	RefSeq	gene	2038477	2038869	.	-	.	ID=gene2006;Dbxref=GeneID:4806782;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=SSA_2033
NC_009009.1	RefSeq	CDS	2038477	2038869	.	-	0	ID=cds1935;Parent=gene2006;Dbxref=Genbank:YP_001035956.1,GeneID:4806782;Name=YP_001035956.1;Note=forms a direct contact with the tRNA during translation;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=YP_001035956.1;transl_table=11
NC_009009.1	RefSeq	gene	2038888	2039334	.	-	.	ID=gene2007;Dbxref=GeneID:4806222;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=SSA_2034
NC_009009.1	RefSeq	CDS	2038888	2039334	.	-	0	ID=cds1936;Parent=gene2007;Dbxref=Genbank:YP_001035957.1,GeneID:4806222;Name=YP_001035957.1;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=YP_001035957.1;transl_table=11
NC_009009.1	RefSeq	gene	2039515	2040378	.	-	.	ID=gene2008;Dbxref=GeneID:4806360;Name=SSA_2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2035
NC_009009.1	RefSeq	CDS	2039515	2040378	.	-	0	ID=cds1937;Parent=gene2008;Dbxref=Genbank:YP_001035958.1,GeneID:4806360;Name=YP_001035958.1;Note=GC: 49.88%25%3B Codon Adaptation Index (CAI): 0.786.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035958.1;transl_table=11
NC_009009.1	RefSeq	gene	2040368	2040889	.	-	.	ID=gene2009;Dbxref=GeneID:4806613;Name=SSA_2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2036
NC_009009.1	RefSeq	CDS	2040368	2040889	.	-	0	ID=cds1938;Parent=gene2009;Dbxref=Genbank:YP_001035959.1,GeneID:4806613;Name=YP_001035959.1;Note=GC: 46.55%25%3B Codon Adaptation Index (CAI): 0.74.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035959.1;transl_table=11
NC_009009.1	RefSeq	gene	2040886	2041614	.	-	.	ID=gene2010;Dbxref=GeneID:4806803;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=SSA_2037
NC_009009.1	RefSeq	CDS	2040886	2041614	.	-	0	ID=cds1939;Parent=gene2010;Dbxref=Genbank:YP_001035960.1,GeneID:4806803;Name=YP_001035960.1;Note=GC: 48.97%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;gene=trmH;product=tRNA (guanosine-2'-O-)-methyltransferase;protein_id=YP_001035960.1;transl_table=11
NC_009009.1	RefSeq	gene	2041767	2042729	.	+	.	ID=gene2011;Dbxref=GeneID:4806615;Name=SSA_2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2038
NC_009009.1	RefSeq	CDS	2041767	2042729	.	+	0	ID=cds1940;Parent=gene2011;Dbxref=Genbank:YP_001035961.1,GeneID:4806615;Name=YP_001035961.1;Note=GC: 49.43%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.738. SignalP prediction: Yes (prob. 0.843).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035961.1;transl_table=11
NC_009009.1	RefSeq	gene	2042797	2044545	.	-	.	ID=gene2012;Dbxref=GeneID:4807953;Name=SSA_2039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2039
NC_009009.1	RefSeq	CDS	2042797	2044545	.	-	0	ID=cds1941;Parent=gene2012;Dbxref=Genbank:YP_001035962.1,GeneID:4807953;Name=YP_001035962.1;Note=GC: 40.59%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.77.;gbkey=CDS;product=aminoacid specific permease;protein_id=YP_001035962.1;transl_table=11
NC_009009.1	RefSeq	gene	2044658	2045788	.	-	.	ID=gene2013;Dbxref=GeneID:4806724;Name=SSA_2040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2040
NC_009009.1	RefSeq	CDS	2044658	2045788	.	-	0	ID=cds1942;Parent=gene2013;Dbxref=Genbank:YP_001035963.1,GeneID:4806724;Name=YP_001035963.1;Note=GC: 40.94%25%3B Transporter classification TC:3.A.1.1.2. Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_001035963.1;transl_table=11
NC_009009.1	RefSeq	gene	2045897	2046772	.	-	.	ID=gene2014;Dbxref=GeneID:4807355;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=SSA_2041
NC_009009.1	RefSeq	CDS	2045897	2046772	.	-	0	ID=cds1943;Parent=gene2014;Dbxref=Genbank:YP_001035964.1,GeneID:4807355;Name=YP_001035964.1;Note=GC: 44.52%25%3B Codon Adaptation Index (CAI): 0.762. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=lrp;product=hypothetical protein;protein_id=YP_001035964.1;transl_table=11
NC_009009.1	RefSeq	gene	2046759	2047163	.	-	.	ID=gene2015;Dbxref=GeneID:4807178;Name=SSA_2042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2042
NC_009009.1	RefSeq	CDS	2046759	2047163	.	-	0	ID=cds1944;Parent=gene2015;Dbxref=Genbank:YP_001035965.1,GeneID:4807178;Name=YP_001035965.1;Note=GC: 49.88%25%3B Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035965.1;transl_table=11
NC_009009.1	RefSeq	gene	2047156	2048499	.	-	.	ID=gene2016;Dbxref=GeneID:4807735;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SSA_2044
NC_009009.1	RefSeq	CDS	2047156	2048499	.	-	0	ID=cds1945;Parent=gene2016;Dbxref=Genbank:YP_001035966.1,GeneID:4807735;Name=YP_001035966.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=YP_001035966.1;transl_table=11
NC_009009.1	RefSeq	gene	2048517	2049038	.	-	.	ID=gene2017;Dbxref=GeneID:4807982;Name=SSA_2045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2045
NC_009009.1	RefSeq	CDS	2048517	2049038	.	-	0	ID=cds1946;Parent=gene2017;Dbxref=Genbank:YP_001035967.1,GeneID:4807982;Name=YP_001035967.1;Note=GC: 46.17%25%3B Codon Adaptation Index (CAI): 0.722.;gbkey=CDS;product=reductase;protein_id=YP_001035967.1;transl_table=11
NC_009009.1	RefSeq	gene	2049047	2049811	.	-	.	ID=gene2018;Dbxref=GeneID:4807239;Name=SSA_2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2046
NC_009009.1	RefSeq	CDS	2049047	2049811	.	-	0	ID=cds1947;Parent=gene2018;Dbxref=Genbank:YP_001035968.1,GeneID:4807239;Name=YP_001035968.1;Note=GC: 47.06%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=uridine phosphorylase;protein_id=YP_001035968.1;transl_table=11
NC_009009.1	RefSeq	gene	2049825	2050043	.	-	.	ID=gene2019;Dbxref=GeneID:4806131;Name=SSA_2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2047
NC_009009.1	RefSeq	CDS	2049825	2050043	.	-	0	ID=cds1948;Parent=gene2019;Dbxref=Genbank:YP_001035969.1,GeneID:4806131;Name=YP_001035969.1;Note=GC: 49.32%25%3B Codon Adaptation Index (CAI): 0.805.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035969.1;transl_table=11
NC_009009.1	RefSeq	gene	2050074	2050691	.	-	.	ID=gene2020;Dbxref=GeneID:4806019;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SSA_2048
NC_009009.1	RefSeq	CDS	2050074	2050691	.	-	0	ID=cds1949;Parent=gene2020;Dbxref=Genbank:YP_001035970.1,GeneID:4806019;Name=YP_001035970.1;Note=GC: 53.72%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=YP_001035970.1;transl_table=11
NC_009009.1	RefSeq	gene	2050783	2052984	.	-	.	ID=gene2021;Dbxref=GeneID:4806628;Name=pnpA;gbkey=Gene;gene=pnpA;gene_biotype=protein_coding;locus_tag=SSA_2049
NC_009009.1	RefSeq	CDS	2050783	2052984	.	-	0	ID=cds1950;Parent=gene2021;Dbxref=Genbank:YP_001035971.1,GeneID:4806628;Name=YP_001035971.1;Note=GC: 47.32%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;gene=pnpA;product=polynucleotide phosphorylase;protein_id=YP_001035971.1;transl_table=11
NC_009009.1	RefSeq	gene	2053395	2054756	.	+	.	ID=gene2022;Dbxref=GeneID:4805862;Name=SSA_2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2050
NC_009009.1	RefSeq	CDS	2053395	2054756	.	+	0	ID=cds1951;Parent=gene2022;Dbxref=Genbank:YP_001035972.1,GeneID:4805862;Name=YP_001035972.1;Note=GC: 42.73%25%3B Transporter classification TC:2.A.1.3.4. Transmembrane domains: 14. Codon Adaptation Index (CAI): 0.73. Curator(s): J. Alves;gbkey=CDS;product=arabinose efflux permease;protein_id=YP_001035972.1;transl_table=11
NC_009009.1	RefSeq	gene	2054871	2056667	.	+	.	ID=gene2023;Dbxref=GeneID:4806051;Name=SSA_2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2051
NC_009009.1	RefSeq	CDS	2054871	2056667	.	+	0	ID=cds1952;Parent=gene2023;Dbxref=Genbank:YP_001035973.1,GeneID:4806051;Name=YP_001035973.1;Note=GC: 48.08%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=oligoendopeptidase;protein_id=YP_001035973.1;transl_table=11
NC_009009.1	RefSeq	gene	2057283	2057597	.	-	.	ID=gene2024;Dbxref=GeneID:4806193;Name=SSA_2052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2052
NC_009009.1	RefSeq	CDS	2057283	2057597	.	-	0	ID=cds1953;Parent=gene2024;Dbxref=Genbank:YP_001035974.1,GeneID:4806193;Name=YP_001035974.1;Note=GC: 47.62%25%3B Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;product=thioredoxin;protein_id=YP_001035974.1;transl_table=11
NC_009009.1	RefSeq	gene	2057616	2057837	.	-	.	ID=gene2025;Dbxref=GeneID:4806234;Name=SSA_2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2053
NC_009009.1	RefSeq	CDS	2057616	2057837	.	-	0	ID=cds1954;Parent=gene2025;Dbxref=Genbank:YP_001035975.1,GeneID:4806234;Name=YP_001035975.1;Note=GC: 40.09%25%3B Codon Adaptation Index (CAI): 0.86.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035975.1;transl_table=11
NC_009009.1	RefSeq	gene	2057882	2057989	.	-	.	ID=gene2026;Dbxref=GeneID:4806524;Name=SSA_2054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2054
NC_009009.1	RefSeq	CDS	2057882	2057989	.	-	0	ID=cds1955;Parent=gene2026;Dbxref=Genbank:YP_001035976.1,GeneID:4806524;Name=YP_001035976.1;Note=GC: 36.11%25%3B Codon Adaptation Index (CAI): 0.803.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035976.1;transl_table=11
NC_009009.1	RefSeq	gene	2058026	2058250	.	-	.	ID=gene2027;Dbxref=GeneID:4806415;Name=SSA_2055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2055
NC_009009.1	RefSeq	CDS	2058026	2058250	.	-	0	ID=cds1956;Parent=gene2027;Dbxref=Genbank:YP_001035977.1,GeneID:4806415;Name=YP_001035977.1;Note=GC: 44.89%25%3B Codon Adaptation Index (CAI): 0.816.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035977.1;transl_table=11
NC_009009.1	RefSeq	gene	2058727	2059653	.	+	.	ID=gene2028;Dbxref=GeneID:4807004;Name=SSA_2056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2056
NC_009009.1	RefSeq	CDS	2058727	2059653	.	+	0	ID=cds1957;Parent=gene2028;Dbxref=Genbank:YP_001035978.1,GeneID:4807004;Name=YP_001035978.1;Note=GC: 47.46%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.763. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.937).;gbkey=CDS;product=cinnamoyl ester hydrolase;protein_id=YP_001035978.1;transl_table=11
NC_009009.1	RefSeq	gene	2060148	2060444	.	-	.	ID=gene2029;Dbxref=GeneID:4805812;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=SSA_2058
NC_009009.1	RefSeq	CDS	2060148	2060444	.	-	0	ID=cds1958;Parent=gene2029;Dbxref=Genbank:YP_001035979.1,GeneID:4805812;Name=YP_001035979.1;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=YP_001035979.1;transl_table=11
NC_009009.1	RefSeq	gene	2060584	2061312	.	-	.	ID=gene2030;Dbxref=GeneID:4808085;Name=SSA_2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2059
NC_009009.1	RefSeq	CDS	2060584	2061312	.	-	0	ID=cds1959;Parent=gene2030;Dbxref=Genbank:YP_001035980.1,GeneID:4808085;Name=YP_001035980.1;Note=GC: 48.01%25%3B Codon Adaptation Index (CAI): 0.761. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=16S rRNA uridine-516 pseudouridylate synthase;protein_id=YP_001035980.1;transl_table=11
NC_009009.1	RefSeq	gene	2061324	2062493	.	-	.	ID=gene2031;Dbxref=GeneID:4807374;Name=SSA_2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2060
NC_009009.1	RefSeq	CDS	2061324	2062493	.	-	0	ID=cds1960;Parent=gene2031;Dbxref=Genbank:YP_001035981.1,GeneID:4807374;Name=YP_001035981.1;Note=GC: 46.24%25%3B Transporter classification TC:2.A.1.15.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.759. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=arabinose efflux permease;protein_id=YP_001035981.1;transl_table=11
NC_009009.1	RefSeq	gene	2062687	2063319	.	+	.	ID=gene2032;Dbxref=GeneID:4806845;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=SSA_2061
NC_009009.1	RefSeq	CDS	2062687	2063319	.	+	0	ID=cds1961;Parent=gene2032;Dbxref=Genbank:YP_001035982.1,GeneID:4806845;Name=YP_001035982.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;gene=def;product=peptide deformylase;protein_id=YP_001035982.1;transl_table=11
NC_009009.1	RefSeq	gene	2063381	2063611	.	-	.	ID=gene2033;Dbxref=GeneID:4806762;Name=SSA_2062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2062
NC_009009.1	RefSeq	CDS	2063381	2063611	.	-	0	ID=cds1962;Parent=gene2033;Dbxref=Genbank:YP_001035983.1,GeneID:4806762;Name=YP_001035983.1;Note=GC: 46.32%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.793.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035983.1;transl_table=11
NC_009009.1	RefSeq	gene	2063706	2064947	.	-	.	ID=gene2034;Dbxref=GeneID:4806067;Name=pepS;gbkey=Gene;gene=pepS;gene_biotype=protein_coding;locus_tag=SSA_2063
NC_009009.1	RefSeq	CDS	2063706	2064947	.	-	0	ID=cds1963;Parent=gene2034;Dbxref=Genbank:YP_001035984.1,GeneID:4806067;Name=YP_001035984.1;Note=GC: 49.28%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;gene=pepS;product=aminopeptidase;protein_id=YP_001035984.1;transl_table=11
NC_009009.1	RefSeq	gene	2064969	2065121	.	-	.	ID=gene2035;Dbxref=GeneID:4806572;Name=SSA_2064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2064
NC_009009.1	RefSeq	CDS	2064969	2065121	.	-	0	ID=cds1964;Parent=gene2035;Dbxref=Genbank:YP_001035985.1,GeneID:4806572;Name=YP_001035985.1;Note=GC: 39.87%25%3B Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035985.1;transl_table=11
NC_009009.1	RefSeq	gene	2065141	2065833	.	-	.	ID=gene2036;Dbxref=GeneID:4806721;Name=SSA_2065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2065
NC_009009.1	RefSeq	CDS	2065141	2065833	.	-	0	ID=cds1965;Parent=gene2036;Dbxref=Genbank:YP_001035986.1,GeneID:4806721;Name=YP_001035986.1;Note=GC: 36.94%25%3B Codon Adaptation Index (CAI): 0.802.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035986.1;transl_table=11
NC_009009.1	RefSeq	gene	2065839	2070227	.	-	.	ID=gene2037;Dbxref=GeneID:4806324;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=SSA_2066
NC_009009.1	RefSeq	CDS	2065839	2070227	.	-	0	ID=cds1966;Parent=gene2037;Dbxref=Genbank:YP_001035987.1,GeneID:4806324;Name=YP_001035987.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B required for leading strand synthesis%3B PolC exhibits 3' to 5' exonuclease activity;gbkey=CDS;gene=polC;product=DNA polymerase III PolC;protein_id=YP_001035987.1;transl_table=11
NC_009009.1	RefSeq	gene	2070394	2070936	.	+	.	ID=gene2038;Dbxref=GeneID:4807137;Name=SSA_2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2067
NC_009009.1	RefSeq	CDS	2070394	2070936	.	+	0	ID=cds1967;Parent=gene2038;Dbxref=Genbank:YP_001035988.1,GeneID:4807137;Name=YP_001035988.1;Note=GC: 34.25%25%3B Codon Adaptation Index (CAI): 0.798. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.9).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035988.1;transl_table=11
NC_009009.1	RefSeq	gene	2071021	2071401	.	-	.	ID=gene2039;Dbxref=GeneID:4807012;Name=SSA_2068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2068
NC_009009.1	RefSeq	CDS	2071021	2071401	.	-	0	ID=cds1968;Parent=gene2039;Dbxref=Genbank:YP_001035989.1,GeneID:4807012;Name=YP_001035989.1;Note=GC: 44.88%25%3B Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=superfamily I DNA/RNA helicase;protein_id=YP_001035989.1;transl_table=11
NC_009009.1	RefSeq	gene	2071492	2073342	.	-	.	ID=gene2040;Dbxref=GeneID:4806247;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=SSA_2069
NC_009009.1	RefSeq	CDS	2071492	2073342	.	-	0	ID=cds1969;Parent=gene2040;Dbxref=Genbank:YP_001035990.1,GeneID:4806247;Name=YP_001035990.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=YP_001035990.1;transl_table=11
NC_009009.1	RefSeq	gene	2073408	2074664	.	-	.	ID=gene2041;Dbxref=GeneID:4807003;Name=eep;gbkey=Gene;gene=eep;gene_biotype=protein_coding;locus_tag=SSA_2070
NC_009009.1	RefSeq	CDS	2073408	2074664	.	-	0	ID=cds1970;Parent=gene2041;Dbxref=Genbank:YP_001035991.1,GeneID:4807003;Name=YP_001035991.1;Note=GC: 47.33%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;gene=eep;product=Zinc metalloprotease;protein_id=YP_001035991.1;transl_table=11
NC_009009.1	RefSeq	gene	2074686	2074856	.	-	.	ID=gene2042;Dbxref=GeneID:4807390;Name=SSA_2071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2071
NC_009009.1	RefSeq	CDS	2074686	2074856	.	-	0	ID=cds1971;Parent=gene2042;Dbxref=Genbank:YP_001035992.1,GeneID:4807390;Name=YP_001035992.1;Note=GC: 42.69%25%3B Codon Adaptation Index (CAI): 0.713.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035992.1;transl_table=11
NC_009009.1	RefSeq	gene	2074890	2075693	.	-	.	ID=gene2043;Dbxref=GeneID:4807681;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SSA_2072
NC_009009.1	RefSeq	CDS	2074890	2075693	.	-	0	ID=cds1972;Parent=gene2043;Dbxref=Genbank:YP_001035993.1,GeneID:4807681;Name=YP_001035993.1;Note=GC: 46.77%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.672).;gbkey=CDS;gene=cdsA;product=phosphatidate cytidylyltransferase;protein_id=YP_001035993.1;transl_table=11
NC_009009.1	RefSeq	gene	2075712	2076461	.	-	.	ID=gene2044;Dbxref=GeneID:4807022;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=SSA_2073
NC_009009.1	RefSeq	CDS	2075712	2076461	.	-	0	ID=cds1973;Parent=gene2044;Dbxref=Genbank:YP_001035994.1,GeneID:4807022;Name=YP_001035994.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;gene=uppS;product=undecaprenyl pyrophosphate synthase;protein_id=YP_001035994.1;transl_table=11
NC_009009.1	RefSeq	gene	2076690	2077025	.	-	.	ID=gene2045;Dbxref=GeneID:4807397;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SSA_2074
NC_009009.1	RefSeq	CDS	2076690	2077025	.	-	0	ID=cds1974;Parent=gene2045;Dbxref=Genbank:YP_001035995.1,GeneID:4807397;Name=YP_001035995.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=YP_001035995.1;transl_table=11
NC_009009.1	RefSeq	gene	2077203	2079179	.	-	.	ID=gene2046;Dbxref=GeneID:4807044;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=SSA_2075
NC_009009.1	RefSeq	CDS	2077203	2079179	.	-	0	ID=cds1975;Parent=gene2046;Dbxref=Genbank:YP_001035996.1,GeneID:4807044;Name=YP_001035996.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;gene=tkt;product=transketolase;protein_id=YP_001035996.1;transl_table=11
NC_009009.1	RefSeq	gene	2079480	2080571	.	-	.	ID=gene2047;Dbxref=GeneID:4807702;Name=SSA_2076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2076
NC_009009.1	RefSeq	CDS	2079480	2080571	.	-	0	ID=cds1976;Parent=gene2047;Dbxref=Genbank:YP_001035997.1,GeneID:4807702;Name=YP_001035997.1;Note=GC: 45.7%25%3B Codon Adaptation Index (CAI): 0.808.;gbkey=CDS;product=L-ascorbate 6-phosphate lactonase;protein_id=YP_001035997.1;transl_table=11
NC_009009.1	RefSeq	gene	2081442	2082182	.	-	.	ID=gene2048;Dbxref=GeneID:4807092;Name=SSA_2077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2077
NC_009009.1	RefSeq	CDS	2081442	2082182	.	-	0	ID=cds1977;Parent=gene2048;Dbxref=Genbank:YP_001035998.1,GeneID:4807092;Name=YP_001035998.1;Note=GC: 35.09%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035998.1;transl_table=11
NC_009009.1	RefSeq	gene	2082266	2083927	.	-	.	ID=gene2049;Dbxref=GeneID:4806932;Name=SSA_2078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2078
NC_009009.1	RefSeq	CDS	2082266	2083927	.	-	0	ID=cds1978;Parent=gene2049;Dbxref=Genbank:YP_001035999.1,GeneID:4806932;Name=YP_001035999.1;Note=GC: 47.53%25%3B Codon Adaptation Index (CAI): 0.771. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001035999.1;transl_table=11
NC_009009.1	RefSeq	gene	2084111	2084659	.	+	.	ID=gene2050;Dbxref=GeneID:4808095;Name=SSA_2079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2079
NC_009009.1	RefSeq	CDS	2084111	2084659	.	+	0	ID=cds1979;Parent=gene2050;Dbxref=Genbank:YP_001036000.1,GeneID:4808095;Name=YP_001036000.1;Note=GC: 49.18%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001036000.1;transl_table=11
NC_009009.1	RefSeq	gene	2084688	2085431	.	-	.	ID=gene2051;Dbxref=GeneID:4806893;Name=SSA_2080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2080
NC_009009.1	RefSeq	CDS	2084688	2085431	.	-	0	ID=cds1980;Parent=gene2051;Dbxref=Genbank:YP_001036001.1,GeneID:4806893;Name=YP_001036001.1;Note=GC: 44.62%25%3B Codon Adaptation Index (CAI): 0.73.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036001.1;transl_table=11
NC_009009.1	RefSeq	gene	2085441	2086964	.	-	.	ID=gene2052;Dbxref=GeneID:4807088;Name=SSA_2082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2082
NC_009009.1	RefSeq	CDS	2085441	2086964	.	-	0	ID=cds1981;Parent=gene2052;Dbxref=Genbank:YP_001036002.1,GeneID:4807088;Name=YP_001036002.1;Note=GC: 48.29%25%3B Codon Adaptation Index (CAI): 0.75.;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_001036002.1;transl_table=11
NC_009009.1	RefSeq	gene	2085449	2085550	.	+	.	ID=gene2053;Dbxref=GeneID:4806958;Name=SSA_2081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2081
NC_009009.1	RefSeq	CDS	2085449	2085550	.	+	0	ID=cds1982;Parent=gene2053;Dbxref=Genbank:YP_001036003.1,GeneID:4806958;Name=YP_001036003.1;Note=GC: 48.04%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036003.1;transl_table=11
NC_009009.1	RefSeq	gene	2087040	2088059	.	-	.	ID=gene2054;Dbxref=GeneID:4807454;Name=SSA_2083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2083
NC_009009.1	RefSeq	CDS	2087040	2088059	.	-	0	ID=cds1983;Parent=gene2054;Dbxref=Genbank:YP_001036004.1,GeneID:4807454;Name=YP_001036004.1;Note=GC: 46.18%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036004.1;transl_table=11
NC_009009.1	RefSeq	gene	2088063	2089514	.	-	.	ID=gene2055;Dbxref=GeneID:4807097;Name=SSA_2084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2084
NC_009009.1	RefSeq	CDS	2088063	2089514	.	-	0	ID=cds1984;Parent=gene2055;Dbxref=Genbank:YP_001036005.1,GeneID:4807097;Name=YP_001036005.1;Note=GC: 45.73%25%3B Transporter classification TC:4.A.5.1.1. Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.757. SignalP prediction: Yes (prob. 0.55)%3B Curator(s): J. Alves;gbkey=CDS;product=PTS system galactitol-specific transporter subunit IIC;protein_id=YP_001036005.1;transl_table=11
NC_009009.1	RefSeq	gene	2089538	2090494	.	-	.	ID=gene2056;Dbxref=GeneID:4807889;Name=SSA_2085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2085
NC_009009.1	RefSeq	CDS	2089538	2090494	.	-	0	ID=cds1985;Parent=gene2056;Dbxref=Genbank:YP_001036006.1,GeneID:4807889;Name=YP_001036006.1;Note=GC: 47.75%25%3B Codon Adaptation Index (CAI): 0.732.;gbkey=CDS;product=glyoxylate reductase%2C NADH-dependent;protein_id=YP_001036006.1;transl_table=11
NC_009009.1	RefSeq	gene	2090487	2091518	.	-	.	ID=gene2057;Dbxref=GeneID:4807824;Name=SSA_2086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2086
NC_009009.1	RefSeq	CDS	2090487	2091518	.	-	0	ID=cds1986;Parent=gene2057;Dbxref=Genbank:YP_001036007.1,GeneID:4807824;Name=YP_001036007.1;Note=GC: 46.61%25%3B Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036007.1;transl_table=11
NC_009009.1	RefSeq	gene	2091764	2092747	.	-	.	ID=gene2058;Dbxref=GeneID:4807904;Name=SSA_2087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2087
NC_009009.1	RefSeq	CDS	2091764	2092747	.	-	0	ID=cds1987;Parent=gene2058;Dbxref=Genbank:YP_001036008.1,GeneID:4807904;Name=YP_001036008.1;Note=GC: 44.11%25%3B Codon Adaptation Index (CAI): 0.734. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036008.1;transl_table=11
NC_009009.1	RefSeq	gene	2092856	2093566	.	-	.	ID=gene2059;Dbxref=GeneID:4807873;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SSA_2088
NC_009009.1	RefSeq	CDS	2092856	2093566	.	-	0	ID=cds1988;Parent=gene2059;Dbxref=Genbank:YP_001036009.1,GeneID:4807873;Name=YP_001036009.1;Note=catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate in the L-arabinose and L-ascorbate degradation pathways;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_001036009.1;transl_table=11
NC_009009.1	RefSeq	gene	2093566	2094429	.	-	.	ID=gene2060;Dbxref=GeneID:4807742;Name=sga;gbkey=Gene;gene=sga;gene_biotype=protein_coding;locus_tag=SSA_2089
NC_009009.1	RefSeq	CDS	2093566	2094429	.	-	0	ID=cds1989;Parent=gene2060;Dbxref=Genbank:YP_001036010.1,GeneID:4807742;Name=YP_001036010.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;gene=sga;product=L-xylulose 5-phosphate 3-epimerase;protein_id=YP_001036010.1;transl_table=11
NC_009009.1	RefSeq	gene	2094433	2095098	.	-	.	ID=gene2061;Dbxref=GeneID:4807100;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=SSA_2090
NC_009009.1	RefSeq	CDS	2094433	2095098	.	-	0	ID=cds1990;Parent=gene2061;Dbxref=Genbank:YP_001036011.2,GeneID:4807100;Name=YP_001036011.2;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;gbkey=CDS;gene=ulaD;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=YP_001036011.2;transl_table=11
NC_009009.1	RefSeq	gene	2095152	2095652	.	-	.	ID=gene2062;Dbxref=GeneID:4806890;Name=ptxA;gbkey=Gene;gene=ptxA;gene_biotype=protein_coding;locus_tag=SSA_2091
NC_009009.1	RefSeq	CDS	2095152	2095652	.	-	0	ID=cds1991;Parent=gene2062;Dbxref=Genbank:YP_001036012.1,GeneID:4806890;Name=YP_001036012.1;Note=GC: 47.5%25%3B Transporter classification TC:4.A.7.1.1. Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;gene=ptxA;product=phosphotransferase system sugar-specific EII component;protein_id=YP_001036012.1;transl_table=11
NC_009009.1	RefSeq	gene	2095787	2096065	.	-	.	ID=gene2063;Dbxref=GeneID:4807269;Name=ptxB;gbkey=Gene;gene=ptxB;gene_biotype=protein_coding;locus_tag=SSA_2092
NC_009009.1	RefSeq	CDS	2095787	2096065	.	-	0	ID=cds1992;Parent=gene2063;Dbxref=Genbank:YP_001036013.1,GeneID:4807269;Name=YP_001036013.1;Note=GC: 37.63%25%3B Transporter classification TC:4.A.7.1.1. Codon Adaptation Index (CAI): 0.815.;gbkey=CDS;gene=ptxB;product=phosphotransferase system sugar-specific EII component;protein_id=YP_001036013.1;transl_table=11
NC_009009.1	RefSeq	gene	2096095	2097552	.	-	.	ID=gene2064;Dbxref=GeneID:4807395;Name=sgaT;gbkey=Gene;gene=sgaT;gene_biotype=protein_coding;locus_tag=SSA_2093
NC_009009.1	RefSeq	CDS	2096095	2097552	.	-	0	ID=cds1993;Parent=gene2064;Dbxref=Genbank:YP_001036014.1,GeneID:4807395;Name=YP_001036014.1;Note=membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;gbkey=CDS;gene=sgaT;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=YP_001036014.1;transl_table=11
NC_009009.1	RefSeq	gene	2098080	2098337	.	-	.	ID=gene2065;Dbxref=GeneID:4807267;Name=SSA_2094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2094
NC_009009.1	RefSeq	CDS	2098080	2098337	.	-	0	ID=cds1994;Parent=gene2065;Dbxref=Genbank:YP_001036015.1,GeneID:4807267;Name=YP_001036015.1;Note=GC: 37.6%25%3B Codon Adaptation Index (CAI): 0.771.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036015.1;transl_table=11
NC_009009.1	RefSeq	gene	2098535	2099284	.	-	.	ID=gene2066;Dbxref=GeneID:4807315;Name=SSA_2095;Note=CAAX amino terminal protease family (pseudogene). GC: 37.47%25. Codon Adaptation Index (CAI): 0.748. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.522). Curator(s): T. Kitten %2C J. Alves.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SSA_2095;pseudo=true
NC_009009.1	RefSeq	gene	2099647	2101785	.	-	.	ID=gene2067;Dbxref=GeneID:4807528;Name=clpL;gbkey=Gene;gene=clpL;gene_biotype=protein_coding;locus_tag=SSA_2096
NC_009009.1	RefSeq	CDS	2099647	2101785	.	-	0	ID=cds1995;Parent=gene2067;Dbxref=Genbank:YP_001036016.1,GeneID:4807528;Name=YP_001036016.1;Note=GC: 47.36%25%3B Codon Adaptation Index (CAI): 0.799.;gbkey=CDS;gene=clpL;product=ATP-dependent protease%2C ATP-binding subunit;protein_id=YP_001036016.1;transl_table=11
NC_009009.1	RefSeq	gene	2102244	2103008	.	-	.	ID=gene2068;Dbxref=GeneID:4806886;Name=SSA_2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2097
NC_009009.1	RefSeq	CDS	2102244	2103008	.	-	0	ID=cds1996;Parent=gene2068;Dbxref=Genbank:YP_001036017.1,GeneID:4806886;Name=YP_001036017.1;Note=GC: 46.54%25%3B Transporter classification TC:3.A.1.3.13. Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=YP_001036017.1;transl_table=11
NC_009009.1	RefSeq	gene	2103021	2103707	.	-	.	ID=gene2069;Dbxref=GeneID:4807209;Name=SSA_2098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2098
NC_009009.1	RefSeq	CDS	2103021	2103707	.	-	0	ID=cds1997;Parent=gene2069;Dbxref=Genbank:YP_001036018.1,GeneID:4807209;Name=YP_001036018.1;Note=GC: 42.5%25%3B Transporter classification TC:3.A.1.3.13. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter permease;protein_id=YP_001036018.1;transl_table=11
NC_009009.1	RefSeq	gene	2103711	2104403	.	-	.	ID=gene2070;Dbxref=GeneID:4807128;Name=SSA_2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2099
NC_009009.1	RefSeq	CDS	2103711	2104403	.	-	0	ID=cds1998;Parent=gene2070;Dbxref=Genbank:YP_001036019.1,GeneID:4807128;Name=YP_001036019.1;Note=GC: 48.34%25%3B Transporter classification TC:3.A.1.3.13. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.776. Curator(s): J. Alves;gbkey=CDS;product=arginine/histidine ABC transporter permease;protein_id=YP_001036019.1;transl_table=11
NC_009009.1	RefSeq	gene	2104599	2105483	.	-	.	ID=gene2071;Dbxref=GeneID:4806858;Name=SSA_2101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2101
NC_009009.1	RefSeq	CDS	2104599	2105483	.	-	0	ID=cds1999;Parent=gene2071;Dbxref=Genbank:YP_001036020.1,GeneID:4806858;Name=YP_001036020.1;Note=GC: 44.29%25%3B Transporter classification TC:3.A.1.3.13. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.811. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_001036020.1;transl_table=11
NC_009009.1	RefSeq	gene	2105499	2106500	.	-	.	ID=gene2072;Dbxref=GeneID:4807399;Name=SSA_2102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2102
NC_009009.1	RefSeq	CDS	2105499	2106500	.	-	0	ID=cds2000;Parent=gene2072;Dbxref=Genbank:YP_001036021.1,GeneID:4807399;Name=YP_001036021.1;Note=GC: 49.1%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036021.1;transl_table=11
NC_009009.1	RefSeq	gene	2106590	2106790	.	-	.	ID=gene2073;Dbxref=GeneID:4806960;Name=SSA_2103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2103
NC_009009.1	RefSeq	CDS	2106590	2106790	.	-	0	ID=cds2001;Parent=gene2073;Dbxref=Genbank:YP_001036022.1,GeneID:4806960;Name=YP_001036022.1;Note=GC: 41.79%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.727. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.815).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036022.1;transl_table=11
NC_009009.1	RefSeq	gene	2106846	2107892	.	-	.	ID=gene2074;Dbxref=GeneID:4807162;Name=SSA_2105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2105
NC_009009.1	RefSeq	CDS	2106846	2107892	.	-	0	ID=cds2002;Parent=gene2074;Dbxref=Genbank:YP_001036023.1,GeneID:4807162;Name=YP_001036023.1;Note=GC: 47.37%25%3B Codon Adaptation Index (CAI): 0.765.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036023.1;transl_table=11
NC_009009.1	RefSeq	gene	2108105	2109154	.	-	.	ID=gene2075;Dbxref=GeneID:4807142;Name=SSA_2106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2106
NC_009009.1	RefSeq	CDS	2108105	2109154	.	-	0	ID=cds2003;Parent=gene2075;Dbxref=Genbank:YP_001036024.1,GeneID:4807142;Name=YP_001036024.1;Note=GC: 53.43%25%3B Codon Adaptation Index (CAI): 0.755. Curator(s): J. Alves;gbkey=CDS;product=flavin monoxygenase;protein_id=YP_001036024.1;transl_table=11
NC_009009.1	RefSeq	gene	2109385	2111196	.	-	.	ID=gene2076;Dbxref=GeneID:4806884;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=SSA_2107
NC_009009.1	RefSeq	CDS	2109385	2111196	.	-	0	ID=cds2004;Parent=gene2076;Dbxref=Genbank:YP_001036025.1,GeneID:4806884;Name=YP_001036025.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;gene=glmS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=YP_001036025.1;transl_table=11
NC_009009.1	RefSeq	gene	2111547	2112554	.	-	.	ID=gene2077;Dbxref=GeneID:4807053;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=SSA_2108
NC_009009.1	RefSeq	CDS	2111547	2112554	.	-	0	ID=cds2005;Parent=gene2077;Dbxref=Genbank:YP_001036026.1,GeneID:4807053;Name=YP_001036026.1;Note=GC: 42.36%25%3B Codon Adaptation Index (CAI): 0.806.;gbkey=CDS;gene=gapA;product=glyceraldehyde 3-phosphate dehydrogenase;protein_id=YP_001036026.1;transl_table=11
NC_009009.1	RefSeq	gene	2112877	2114958	.	-	.	ID=gene2078;Dbxref=GeneID:4807075;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SSA_2109
NC_009009.1	RefSeq	CDS	2112877	2114958	.	-	0	ID=cds2006;Parent=gene2078;Dbxref=Genbank:YP_001036027.1,GeneID:4807075;Name=YP_001036027.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=YP_001036027.1;transl_table=11
NC_009009.1	RefSeq	gene	2115199	2115669	.	-	.	ID=gene2079;Dbxref=GeneID:4806914;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=SSA_2110
NC_009009.1	RefSeq	CDS	2115199	2115669	.	-	0	ID=cds2007;Parent=gene2079;Dbxref=Genbank:YP_001036028.1,GeneID:4806914;Name=YP_001036028.1;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;gbkey=CDS;gene=rpsG;product=30S ribosomal protein S7;protein_id=YP_001036028.1;transl_table=11
NC_009009.1	RefSeq	gene	2115689	2116102	.	-	.	ID=gene2080;Dbxref=GeneID:4807357;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=SSA_2111
NC_009009.1	RefSeq	CDS	2115689	2116102	.	-	0	ID=cds2008;Parent=gene2080;Dbxref=Genbank:YP_001036029.1,GeneID:4807357;Name=YP_001036029.1;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;gbkey=CDS;gene=rpsL;product=30S ribosomal protein S12;protein_id=YP_001036029.1;transl_table=11
NC_009009.1	RefSeq	gene	2116089	2116181	.	-	.	ID=gene2081;Dbxref=GeneID:4807173;Name=SSA_2112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2112
NC_009009.1	RefSeq	CDS	2116089	2116181	.	-	0	ID=cds2009;Parent=gene2081;Dbxref=Genbank:YP_001036030.1,GeneID:4807173;Name=YP_001036030.1;Note=GC: 35.48%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036030.1;transl_table=11
NC_009009.1	RefSeq	gene	2116318	2116782	.	-	.	ID=gene2082;Dbxref=GeneID:4807010;Name=SSA_2113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2113
NC_009009.1	RefSeq	CDS	2116318	2116782	.	-	0	ID=cds2010;Parent=gene2082;Dbxref=Genbank:YP_001036031.1,GeneID:4807010;Name=YP_001036031.1;Note=GC: 45.59%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.773. SignalP prediction: Yes (prob. 0.975).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036031.1;transl_table=11
NC_009009.1	RefSeq	gene	2116804	2117649	.	-	.	ID=gene2083;Dbxref=GeneID:4807006;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=SSA_2114
NC_009009.1	RefSeq	CDS	2116804	2117649	.	-	0	ID=cds2011;Parent=gene2083;Dbxref=Genbank:YP_001036032.1,GeneID:4807006;Name=YP_001036032.1;Note=GC: 41.49%25%3B Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves;gbkey=CDS;gene=purR;product=pur operon repressor;protein_id=YP_001036032.1;transl_table=11
NC_009009.1	RefSeq	gene	2117712	2118656	.	-	.	ID=gene2084;Dbxref=GeneID:4807126;Name=cbf;gbkey=Gene;gene=cbf;gene_biotype=protein_coding;locus_tag=SSA_2116
NC_009009.1	RefSeq	CDS	2117712	2118656	.	-	0	ID=cds2012;Parent=gene2084;Dbxref=Genbank:YP_001036033.1,GeneID:4807126;Name=YP_001036033.1;Note=GC: 45.82%25%3B Codon Adaptation Index (CAI): 0.787.;gbkey=CDS;gene=cbf;product=CMP-binding-factor 1;protein_id=YP_001036033.1;transl_table=11
NC_009009.1	RefSeq	gene	2118646	2119902	.	-	.	ID=gene2085;Dbxref=GeneID:4807394;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=SSA_2117
NC_009009.1	RefSeq	CDS	2118646	2119902	.	-	0	ID=cds2013;Parent=gene2085;Dbxref=Genbank:YP_001036034.1,GeneID:4807394;Name=YP_001036034.1;Note=GC: 46.7%25%3B Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves;gbkey=CDS;gene=rmuC;product=DNA recombination protein RmuC;protein_id=YP_001036034.1;transl_table=11
NC_009009.1	RefSeq	gene	2119904	2120590	.	-	.	ID=gene2086;Dbxref=GeneID:4807237;Name=SSA_2118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2118
NC_009009.1	RefSeq	CDS	2119904	2120590	.	-	0	ID=cds2014;Parent=gene2086;Dbxref=Genbank:YP_001036035.1,GeneID:4807237;Name=YP_001036035.1;Note=GC: 43.09%25%3B Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452)%3B Curator(s): J. Alves;gbkey=CDS;product=thiamine pyrophosphokinase;protein_id=YP_001036035.1;transl_table=11
NC_009009.1	RefSeq	gene	2120529	2121188	.	-	.	ID=gene2087;Dbxref=GeneID:4807221;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=SSA_2119
NC_009009.1	RefSeq	CDS	2120529	2121188	.	-	0	ID=cds2015;Parent=gene2087;Dbxref=Genbank:YP_001036036.1,GeneID:4807221;Name=YP_001036036.1;Note=GC: 46.06%25%3B Codon Adaptation Index (CAI): 0.811.;gbkey=CDS;gene=rpe;product=pentose-5-phosphate-3-epimerase;protein_id=YP_001036036.1;transl_table=11
NC_009009.1	RefSeq	gene	2121200	2121841	.	-	.	ID=gene2088;Dbxref=GeneID:4806944;Name=SSA_2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2120
NC_009009.1	RefSeq	CDS	2121200	2121841	.	-	0	ID=cds2016;Parent=gene2088;Dbxref=Genbank:YP_001036037.1,GeneID:4806944;Name=YP_001036037.1;Note=GC: 45.95%25%3B Codon Adaptation Index (CAI): 0.791.;gbkey=CDS;product=GTPase;protein_id=YP_001036037.1;transl_table=11
NC_009009.1	RefSeq	gene	2122312	2126997	.	-	.	ID=gene2089;Dbxref=GeneID:4806894;Name=SSA_2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2121
NC_009009.1	RefSeq	CDS	2122312	2126997	.	-	0	ID=cds2017;Parent=gene2089;Dbxref=Genbank:YP_001036038.1,GeneID:4806894;Name=YP_001036038.1;Note=GC: 44.17%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.82. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=YP_001036038.1;transl_table=11
NC_009009.1	RefSeq	gene	2127192	2127274	.	+	.	ID=gene2090;Dbxref=GeneID:4807183;Name=SSA_2446;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2446
NC_009009.1	RefSeq	tRNA	2127192	2127274	.	+	.	ID=rna68;Parent=gene2090;Dbxref=GeneID:4807183;Note=tRNA-Leu_4;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	exon	2127192	2127274	.	+	.	ID=id69;Parent=rna68;Dbxref=GeneID:4807183;Note=tRNA-Leu_4;gbkey=tRNA;product=tRNA-Leu
NC_009009.1	RefSeq	gene	2127290	2127697	.	-	.	ID=gene2091;Dbxref=GeneID:4806931;Name=SSA_2122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2122
NC_009009.1	RefSeq	CDS	2127290	2127697	.	-	0	ID=cds2018;Parent=gene2091;Dbxref=Genbank:YP_001036039.1,GeneID:4806931;Name=YP_001036039.1;Note=GC: 40.2%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.746.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036039.1;transl_table=11
NC_009009.1	RefSeq	gene	2127754	2128626	.	-	.	ID=gene2092;Dbxref=GeneID:4807364;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=SSA_2123
NC_009009.1	RefSeq	CDS	2127754	2128626	.	-	0	ID=cds2019;Parent=gene2092;Dbxref=Genbank:YP_001036040.1,GeneID:4807364;Name=YP_001036040.1;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=YP_001036040.1;transl_table=11
NC_009009.1	RefSeq	gene	2128647	2129501	.	-	.	ID=gene2093;Dbxref=GeneID:4808099;Name=SSA_2124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2124
NC_009009.1	RefSeq	CDS	2128647	2129501	.	-	0	ID=cds2020;Parent=gene2093;Dbxref=Genbank:YP_001036041.1,GeneID:4808099;Name=YP_001036041.1;Note=GC: 38.48%25%3B Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves;gbkey=CDS;product=dehydrogenase-like protein;protein_id=YP_001036041.1;transl_table=11
NC_009009.1	RefSeq	gene	2129513	2130109	.	-	.	ID=gene2094;Dbxref=GeneID:4806855;Name=SSA_2125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2125
NC_009009.1	RefSeq	CDS	2129513	2130109	.	-	0	ID=cds2021;Parent=gene2094;Dbxref=Genbank:YP_001036042.1,GeneID:4806855;Name=YP_001036042.1;Note=GC: 47.74%25%3B Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=small primase-like protein;protein_id=YP_001036042.1;transl_table=11
NC_009009.1	RefSeq	gene	2130075	2130845	.	-	.	ID=gene2095;Dbxref=GeneID:4807863;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=SSA_2126
NC_009009.1	RefSeq	CDS	2130075	2130845	.	-	0	ID=cds2022;Parent=gene2095;Dbxref=Genbank:YP_001036043.1,GeneID:4807863;Name=YP_001036043.1;Note=GC: 48.77%25%3B Codon Adaptation Index (CAI): 0.756.;gbkey=CDS;gene=tatD;product=hypothetical protein;protein_id=YP_001036043.1;transl_table=11
NC_009009.1	RefSeq	gene	2130842	2130940	.	-	.	ID=gene2096;Dbxref=GeneID:4806393;Name=SSA_2127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2127
NC_009009.1	RefSeq	CDS	2130842	2130940	.	-	0	ID=cds2023;Parent=gene2096;Dbxref=Genbank:YP_001036044.1,GeneID:4806393;Name=YP_001036044.1;Note=GC: 31.31%25%3B Codon Adaptation Index (CAI): 0.777.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036044.1;transl_table=11
NC_009009.1	RefSeq	gene	2130941	2132182	.	-	.	ID=gene2097;Dbxref=GeneID:4806580;Name=labT;gbkey=Gene;gene=labT;gene_biotype=protein_coding;locus_tag=SSA_2128
NC_009009.1	RefSeq	CDS	2130941	2132182	.	-	0	ID=cds2024;Parent=gene2097;Dbxref=Genbank:YP_001036045.1,GeneID:4806580;Name=YP_001036045.1;Note=GC: 39.69%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.766.;gbkey=CDS;gene=labT;product=hypothetical protein;protein_id=YP_001036045.1;transl_table=11
NC_009009.1	RefSeq	gene	2132313	2133398	.	-	.	ID=gene2098;Dbxref=GeneID:4806358;Name=SSA_2129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2129
NC_009009.1	RefSeq	CDS	2132313	2133398	.	-	0	ID=cds2025;Parent=gene2098;Dbxref=Genbank:YP_001036046.1,GeneID:4806358;Name=YP_001036046.1;Note=GC: 40.15%25%3B Codon Adaptation Index (CAI): 0.744. Curator(s): J. Alves;gbkey=CDS;product=arsenical resistance operon repressor ArsR;protein_id=YP_001036046.1;transl_table=11
NC_009009.1	RefSeq	gene	2133604	2134080	.	+	.	ID=gene2099;Dbxref=GeneID:4806476;Name=SSA_2130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2130
NC_009009.1	RefSeq	CDS	2133604	2134080	.	+	0	ID=cds2026;Parent=gene2099;Dbxref=Genbank:YP_001036047.1,GeneID:4806476;Name=YP_001036047.1;Note=GC: 44.86%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036047.1;transl_table=11
NC_009009.1	RefSeq	gene	2134089	2134307	.	+	.	ID=gene2100;Dbxref=GeneID:4806477;Name=SSA_2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2131
NC_009009.1	RefSeq	CDS	2134089	2134307	.	+	0	ID=cds2027;Parent=gene2100;Dbxref=Genbank:YP_001036048.1,GeneID:4806477;Name=YP_001036048.1;Note=GC: 44.75%25%3B Codon Adaptation Index (CAI): 0.737.;gbkey=CDS;product=DNA-binding protein;protein_id=YP_001036048.1;transl_table=11
NC_009009.1	RefSeq	gene	2134310	2135725	.	+	.	ID=gene2101;Dbxref=GeneID:4806149;Name=SSA_2132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2132
NC_009009.1	RefSeq	CDS	2134310	2135725	.	+	0	ID=cds2028;Parent=gene2101;Dbxref=Genbank:YP_001036049.1,GeneID:4806149;Name=YP_001036049.1;Note=GC: 45.69%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.726. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=Ure cluster protein;protein_id=YP_001036049.1;transl_table=11
NC_009009.1	RefSeq	gene	2135857	2136417	.	-	.	ID=gene2102;Dbxref=GeneID:4806150;Name=SSA_2133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2133
NC_009009.1	RefSeq	CDS	2135857	2136417	.	-	0	ID=cds2029;Parent=gene2102;Dbxref=Genbank:YP_001036050.1,GeneID:4806150;Name=YP_001036050.1;Note=GC: 36.9%25%3B Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=YP_001036050.1;transl_table=11
NC_009009.1	RefSeq	gene	2136429	2136893	.	-	.	ID=gene2103;Dbxref=GeneID:4806386;Name=SSA_2134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2134
NC_009009.1	RefSeq	CDS	2136429	2136893	.	-	0	ID=cds2030;Parent=gene2103;Dbxref=Genbank:YP_001036051.1,GeneID:4806386;Name=YP_001036051.1;Note=GC: 32.04%25%3B Codon Adaptation Index (CAI): 0.749.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036051.1;transl_table=11
NC_009009.1	RefSeq	gene	2136917	2137534	.	+	.	ID=gene2104;Dbxref=GeneID:4806387;Name=SSA_2135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2135
NC_009009.1	RefSeq	CDS	2136917	2137534	.	+	0	ID=cds2031;Parent=gene2104;Dbxref=Genbank:YP_001036052.1,GeneID:4806387;Name=YP_001036052.1;Note=GC: 33.33%25%3B Codon Adaptation Index (CAI): 0.774. Curator(s): J. Alves;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=YP_001036052.1;transl_table=11
NC_009009.1	RefSeq	gene	2137597	2137731	.	-	.	ID=gene2105;Dbxref=GeneID:4805962;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SSA_2136
NC_009009.1	RefSeq	CDS	2137597	2137731	.	-	0	ID=cds2032;Parent=gene2105;Dbxref=Genbank:YP_001036053.1,GeneID:4805962;Name=YP_001036053.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=YP_001036053.1;transl_table=11
NC_009009.1	RefSeq	gene	2137870	2138502	.	-	.	ID=gene2106;Dbxref=GeneID:4805963;Name=SSA_2137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2137
NC_009009.1	RefSeq	CDS	2137870	2138502	.	-	0	ID=cds2033;Parent=gene2106;Dbxref=Genbank:YP_001036054.1,GeneID:4805963;Name=YP_001036054.1;Note=GC: 48.82%25%3B Codon Adaptation Index (CAI): 0.75. Curator(s): J. Alves%3B possible sakacin A production response transcriptional regulator sapR;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036054.1;transl_table=11
NC_009009.1	RefSeq	gene	2138552	2139577	.	-	.	ID=gene2107;Dbxref=GeneID:4806182;Name=jag;gbkey=Gene;gene=jag;gene_biotype=protein_coding;locus_tag=SSA_2138
NC_009009.1	RefSeq	CDS	2138552	2139577	.	-	0	ID=cds2034;Parent=gene2107;Dbxref=Genbank:YP_001036055.1,GeneID:4806182;Name=YP_001036055.1;Note=GC: 45.81%25%3B Codon Adaptation Index (CAI): 0.791. Curator(s): J. Alves;gbkey=CDS;gene=jag;product=RNA-binding protein;protein_id=YP_001036055.1;transl_table=11
NC_009009.1	RefSeq	gene	2139599	2140414	.	-	.	ID=gene2108;Dbxref=GeneID:4806183;Name=SSA_2139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2139
NC_009009.1	RefSeq	CDS	2139599	2140414	.	-	0	ID=cds2035;Parent=gene2108;Dbxref=Genbank:YP_001036056.1,GeneID:4806183;Name=YP_001036056.1;Note=GC: 47.3%25%3B Transporter classification TC:2.A.9.3.2. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.764. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=membrane protein (preprotein translocase) oxaA 1;protein_id=YP_001036056.1;transl_table=11
NC_009009.1	RefSeq	gene	2140398	2140664	.	-	.	ID=gene2109;Dbxref=GeneID:4807700;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SSA_2140
NC_009009.1	RefSeq	CDS	2140398	2140664	.	-	0	ID=cds2036;Parent=gene2109;Dbxref=Genbank:YP_001036057.1,GeneID:4807700;Name=YP_001036057.1;Note=GC: 38.2%25%3B Codon Adaptation Index (CAI): 0.803. Curator(s): J. Alves;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=YP_001036057.1;transl_table=11
NC_009009.1	RefSeq	gene	2140909	2142291	.	-	.	ID=gene2110;Dbxref=GeneID:4807701;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=SSA_2141
NC_009009.1	RefSeq	CDS	2140909	2142291	.	-	0	ID=cds2037;Parent=gene2110;Dbxref=Genbank:YP_001036058.1,GeneID:4807701;Name=YP_001036058.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=YP_001036058.1;transl_table=11
NC_009009.1	RefSeq	gene	2142306	2143505	.	-	.	ID=gene2111;Dbxref=GeneID:4806605;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=SSA_2142
NC_009009.1	RefSeq	CDS	2142306	2143505	.	-	0	ID=cds2038;Parent=gene2111;Dbxref=Genbank:YP_001036059.1,GeneID:4806605;Name=YP_001036059.1;Note=catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis%2C AMP-forming;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=YP_001036059.1;transl_table=11
NC_009009.1	RefSeq	gene	2143680	2144315	.	-	.	ID=gene2112;Dbxref=GeneID:4806606;Name=SSA_2143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2143
NC_009009.1	RefSeq	CDS	2143680	2144315	.	-	0	ID=cds2039;Parent=gene2112;Dbxref=Genbank:YP_001036060.1,GeneID:4806606;Name=YP_001036060.1;Note=GC: 44.65%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.769. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.993)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036060.1;transl_table=11
NC_009009.1	RefSeq	gene	2144405	2145862	.	-	.	ID=gene2113;Dbxref=GeneID:4806767;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SSA_2144
NC_009009.1	RefSeq	CDS	2144405	2145862	.	-	0	ID=cds2040;Parent=gene2113;Dbxref=Genbank:YP_001036061.1,GeneID:4806767;Name=YP_001036061.1;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=YP_001036061.1;transl_table=11
NC_009009.1	RefSeq	gene	2145969	2146748	.	-	.	ID=gene2114;Dbxref=GeneID:4806768;Name=estA;gbkey=Gene;gene=estA;gene_biotype=protein_coding;locus_tag=SSA_2145
NC_009009.1	RefSeq	CDS	2145969	2146748	.	-	0	ID=cds2041;Parent=gene2114;Dbxref=Genbank:YP_001036062.1,GeneID:4806768;Name=YP_001036062.1;Note=GC: 47.82%25%3B Codon Adaptation Index (CAI): 0.781.;gbkey=CDS;gene=estA;product=tributyrin esterase;protein_id=YP_001036062.1;transl_table=11
NC_009009.1	RefSeq	gene	2146822	2148489	.	-	.	ID=gene2115;Dbxref=GeneID:4805930;Name=SSA_2146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2146
NC_009009.1	RefSeq	CDS	2146822	2148489	.	-	0	ID=cds2042;Parent=gene2115;Dbxref=Genbank:YP_001036063.1,GeneID:4805930;Name=YP_001036063.1;Note=GC: 47.96%25%3B Codon Adaptation Index (CAI): 0.805. Curator(s): J. Alves;gbkey=CDS;product=metallo-beta-lactamase;protein_id=YP_001036063.1;transl_table=11
NC_009009.1	RefSeq	gene	2149259	2149462	.	-	.	ID=gene2116;Dbxref=GeneID:4806241;Name=SSA_2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2147
NC_009009.1	RefSeq	CDS	2149259	2149462	.	-	0	ID=cds2043;Parent=gene2116;Dbxref=Genbank:YP_001036064.1,GeneID:4806241;Name=YP_001036064.1;Note=GC: 33.82%25%3B Codon Adaptation Index (CAI): 0.884. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036064.1;transl_table=11
NC_009009.1	RefSeq	gene	2149539	2150129	.	-	.	ID=gene2117;Dbxref=GeneID:4805786;Name=SSA_2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2148
NC_009009.1	RefSeq	CDS	2149539	2150129	.	-	0	ID=cds2044;Parent=gene2117;Dbxref=Genbank:YP_001036065.1,GeneID:4805786;Name=YP_001036065.1;Note=GC: 38.07%25%3B Codon Adaptation Index (CAI): 0.837. General stress protein%2C similar to alkaline shock protein. Curator(s): J. Alves;gbkey=CDS;product=alkaline shock stress response protein;protein_id=YP_001036065.1;transl_table=11
NC_009009.1	RefSeq	gene	2150148	2150318	.	-	.	ID=gene2118;Dbxref=GeneID:4806147;Name=SSA_2386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2386
NC_009009.1	RefSeq	CDS	2150148	2150318	.	-	0	ID=cds2045;Parent=gene2118;Dbxref=Genbank:YP_001036066.1,GeneID:4806147;Name=YP_001036066.1;Note=GC: 30.99%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.766. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036066.1;transl_table=11
NC_009009.1	RefSeq	gene	2150330	2150911	.	-	.	ID=gene2119;Dbxref=GeneID:4805955;Name=SSA_2149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2149
NC_009009.1	RefSeq	CDS	2150330	2150911	.	-	0	ID=cds2046;Parent=gene2119;Dbxref=Genbank:YP_001036067.1,GeneID:4805955;Name=YP_001036067.1;Note=GC: 36.94%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.757. SignalP prediction: Yes (prob. 0.721).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036067.1;transl_table=11
NC_009009.1	RefSeq	gene	2150967	2151206	.	-	.	ID=gene2120;Dbxref=GeneID:4805911;Name=SSA_2150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2150
NC_009009.1	RefSeq	CDS	2150967	2151206	.	-	0	ID=cds2047;Parent=gene2120;Dbxref=Genbank:YP_001036068.1,GeneID:4805911;Name=YP_001036068.1;Note=GC: 40.83%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.827.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036068.1;transl_table=11
NC_009009.1	RefSeq	gene	2151500	2152981	.	+	.	ID=gene2121;Dbxref=GeneID:4806425;Name=mga;gbkey=Gene;gene=mga;gene_biotype=protein_coding;locus_tag=SSA_2151
NC_009009.1	RefSeq	CDS	2151500	2152981	.	+	0	ID=cds2048;Parent=gene2121;Dbxref=Genbank:YP_001036069.1,GeneID:4806425;Name=YP_001036069.1;Note=GC: 30.63%25%3B Codon Adaptation Index (CAI): 0.767. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=mga;product=M protein trans-acting positive transcriptional regulator;protein_id=YP_001036069.1;transl_table=11
NC_009009.1	RefSeq	gene	2153133	2153891	.	-	.	ID=gene2122;Dbxref=GeneID:4806500;Name=SSA_2152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2152
NC_009009.1	RefSeq	CDS	2153133	2153891	.	-	0	ID=cds2049;Parent=gene2122;Dbxref=Genbank:YP_001036070.1,GeneID:4806500;Name=YP_001036070.1;Note=GC: 45.85%25%3B Transporter classification TC:3.A.1.12.4. Codon Adaptation Index (CAI): 0.736. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_001036070.1;transl_table=11
NC_009009.1	RefSeq	gene	2153888	2154754	.	-	.	ID=gene2123;Dbxref=GeneID:4805767;Name=SSA_2153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2153
NC_009009.1	RefSeq	CDS	2153888	2154754	.	-	0	ID=cds2050;Parent=gene2123;Dbxref=Genbank:YP_001036071.1,GeneID:4805767;Name=YP_001036071.1;Note=GC: 49.25%25%3B Transporter classification TC:3.A.1.2.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.758. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter permease;protein_id=YP_001036071.1;transl_table=11
NC_009009.1	RefSeq	gene	2154852	2155349	.	-	.	ID=gene2124;Dbxref=GeneID:4806438;Name=SSA_2154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2154
NC_009009.1	RefSeq	CDS	2154852	2155349	.	-	0	ID=cds2051;Parent=gene2124;Dbxref=Genbank:YP_001036072.1,GeneID:4806438;Name=YP_001036072.1;Note=GC: 48.59%25%3B Codon Adaptation Index (CAI): 0.749.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036072.1;transl_table=11
NC_009009.1	RefSeq	gene	2155497	2156192	.	-	.	ID=gene2125;Dbxref=GeneID:4806468;Name=SSA_2155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2155
NC_009009.1	RefSeq	CDS	2155497	2156192	.	-	0	ID=cds2052;Parent=gene2125;Dbxref=Genbank:YP_001036073.1,GeneID:4806468;Name=YP_001036073.1;Note=GC: 46.84%25%3B Codon Adaptation Index (CAI): 0.801.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036073.1;transl_table=11
NC_009009.1	RefSeq	gene	2156306	2157022	.	-	.	ID=gene2126;Dbxref=GeneID:4805796;Name=SSA_2156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2156
NC_009009.1	RefSeq	CDS	2156306	2157022	.	-	0	ID=cds2053;Parent=gene2126;Dbxref=Genbank:YP_001036074.1,GeneID:4805796;Name=YP_001036074.1;Note=GC: 44.35%25%3B Codon Adaptation Index (CAI): 0.76. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036074.1;transl_table=11
NC_009009.1	RefSeq	gene	2157138	2158331	.	-	.	ID=gene2127;Dbxref=GeneID:4806094;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=SSA_2157
NC_009009.1	RefSeq	CDS	2157138	2158331	.	-	0	ID=cds2054;Parent=gene2127;Dbxref=Genbank:YP_001036075.1,GeneID:4806094;Name=YP_001036075.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;gene=radA;product=DNA repair protein RadA;protein_id=YP_001036075.1;transl_table=11
NC_009009.1	RefSeq	gene	2158511	2159143	.	-	.	ID=gene2128;Dbxref=GeneID:4805899;Name=SSA_2158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2158
NC_009009.1	RefSeq	CDS	2158511	2159143	.	-	0	ID=cds2055;Parent=gene2128;Dbxref=Genbank:YP_001036076.1,GeneID:4805899;Name=YP_001036076.1;Note=GC: 40.76%25%3B Codon Adaptation Index (CAI): 0.766. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=methyltransferase;protein_id=YP_001036076.1;transl_table=11
NC_009009.1	RefSeq	gene	2159196	2159711	.	-	.	ID=gene2129;Dbxref=GeneID:4806250;Name=SSA_2159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2159
NC_009009.1	RefSeq	CDS	2159196	2159711	.	-	0	ID=cds2056;Parent=gene2129;Dbxref=Genbank:YP_001036077.1,GeneID:4806250;Name=YP_001036077.1;Note=GC: 47.09%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036077.1;transl_table=11
NC_009009.1	RefSeq	gene	2159713	2160156	.	-	.	ID=gene2130;Dbxref=GeneID:4806214;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=SSA_2160
NC_009009.1	RefSeq	CDS	2159713	2160156	.	-	0	ID=cds2057;Parent=gene2130;Dbxref=Genbank:YP_001036078.1,GeneID:4806214;Name=YP_001036078.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;gene=dut;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=YP_001036078.1;transl_table=11
NC_009009.1	RefSeq	gene	2160241	2160690	.	-	.	ID=gene2131;Dbxref=GeneID:4806089;Name=SSA_2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2161
NC_009009.1	RefSeq	CDS	2160241	2160690	.	-	0	ID=cds2058;Parent=gene2131;Dbxref=Genbank:YP_001036079.1,GeneID:4806089;Name=YP_001036079.1;Note=GC: 41.11%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=NTP pyrophosphohydrolases including oxidative damage repair enzymes;protein_id=YP_001036079.1;transl_table=11
NC_009009.1	RefSeq	gene	2160732	2160875	.	+	.	ID=gene2132;Dbxref=GeneID:4805882;Name=SSA_2162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2162
NC_009009.1	RefSeq	CDS	2160732	2160875	.	+	0	ID=cds2059;Parent=gene2132;Dbxref=Genbank:YP_001036080.1,GeneID:4805882;Name=YP_001036080.1;Note=GC: 32.64%25%3B Codon Adaptation Index (CAI): 0.765.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036080.1;transl_table=11
NC_009009.1	RefSeq	gene	2160956	2161645	.	-	.	ID=gene2133;Dbxref=GeneID:4806496;Name=SSA_2164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2164
NC_009009.1	RefSeq	CDS	2160956	2161645	.	-	0	ID=cds2060;Parent=gene2133;Dbxref=Genbank:YP_001036081.1,GeneID:4806496;Name=YP_001036081.1;Note=GC: 44.64%25%3B Codon Adaptation Index (CAI): 0.794.;gbkey=CDS;product=glutamine amidotransferase;protein_id=YP_001036081.1;transl_table=11
NC_009009.1	RefSeq	gene	2161874	2163847	.	+	.	ID=gene2134;Dbxref=GeneID:4806130;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=SSA_2165
NC_009009.1	RefSeq	CDS	2161874	2163847	.	+	0	ID=cds2061;Parent=gene2134;Dbxref=Genbank:YP_001036082.1,GeneID:4806130;Name=YP_001036082.1;Note=GC: 45.24%25%3B Transporter classification TC:3.A.1.5.2. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;gene=oppA;product=peptide ABC transporter periplasmic protein;protein_id=YP_001036082.1;transl_table=11
NC_009009.1	RefSeq	gene	2163963	2165732	.	-	.	ID=gene2135;Dbxref=GeneID:4805966;Name=SSA_2166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2166
NC_009009.1	RefSeq	CDS	2163963	2165732	.	-	0	ID=cds2062;Parent=gene2135;Dbxref=Genbank:YP_001036083.1,GeneID:4805966;Name=YP_001036083.1;Note=GC: 47.51%25%3B Transporter classification TC:3.A.1.106.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.772. SignalP prediction: Yes (prob. 0.969)%3B Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001036083.1;transl_table=11
NC_009009.1	RefSeq	gene	2165734	2167461	.	-	.	ID=gene2136;Dbxref=GeneID:4806031;Name=SSA_2167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2167
NC_009009.1	RefSeq	CDS	2165734	2167461	.	-	0	ID=cds2063;Parent=gene2136;Dbxref=Genbank:YP_001036084.1,GeneID:4806031;Name=YP_001036084.1;Note=GC: 47.28%25%3B Transporter classification TC:3.A.1.201.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.763. SignalP prediction: Yes (prob. 0.592)%3B Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_001036084.1;transl_table=11
NC_009009.1	RefSeq	gene	2167601	2168623	.	+	.	ID=gene2137;Dbxref=GeneID:4806463;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=SSA_2168
NC_009009.1	RefSeq	CDS	2167601	2168623	.	+	0	ID=cds2064;Parent=gene2137;Dbxref=Genbank:YP_001036085.1,GeneID:4806463;Name=YP_001036085.1;Note=catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;gbkey=CDS;gene=gpsA;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=YP_001036085.1;transl_table=11
NC_009009.1	RefSeq	gene	2168586	2169545	.	+	.	ID=gene2138;Dbxref=GeneID:4807791;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=SSA_2169
NC_009009.1	RefSeq	CDS	2168586	2169545	.	+	0	ID=cds2065;Parent=gene2138;Dbxref=Genbank:YP_001036086.1,GeneID:4807791;Name=YP_001036086.1;Note=GC: 45.83%25%3B Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.993)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=galU;product=glucose-1-phosphate uridylyltransferase;protein_id=YP_001036086.1;transl_table=11
NC_009009.1	RefSeq	gene	2169647	2170330	.	-	.	ID=gene2139;Dbxref=GeneID:4807838;Name=SSA_2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2170
NC_009009.1	RefSeq	CDS	2169647	2170330	.	-	0	ID=cds2066;Parent=gene2139;Dbxref=Genbank:YP_001036087.1,GeneID:4807838;Name=YP_001036087.1;Note=GC: 41.37%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.774. SignalP prediction: Yes (prob. 0.942).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036087.1;transl_table=11
NC_009009.1	RefSeq	gene	2170314	2170850	.	-	.	ID=gene2140;Dbxref=GeneID:4807542;Name=SSA_2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2171
NC_009009.1	RefSeq	CDS	2170314	2170850	.	-	0	ID=cds2067;Parent=gene2140;Dbxref=Genbank:YP_001036088.1,GeneID:4807542;Name=YP_001036088.1;Note=GC: 44.88%25%3B Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036088.1;transl_table=11
NC_009009.1	RefSeq	gene	2170871	2172004	.	-	.	ID=gene2141;Dbxref=GeneID:4806562;Name=hipO;gbkey=Gene;gene=hipO;gene_biotype=protein_coding;locus_tag=SSA_2173
NC_009009.1	RefSeq	CDS	2170871	2172004	.	-	0	ID=cds2068;Parent=gene2141;Dbxref=Genbank:YP_001036089.1,GeneID:4806562;Name=YP_001036089.1;Note=GC: 49.74%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;gene=hipO;product=aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase;protein_id=YP_001036089.1;transl_table=11
NC_009009.1	RefSeq	gene	2172081	2172779	.	-	.	ID=gene2142;Dbxref=GeneID:4808062;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=SSA_2174
NC_009009.1	RefSeq	CDS	2172081	2172779	.	-	0	ID=cds2069;Parent=gene2142;Dbxref=Genbank:YP_001036090.1,GeneID:4808062;Name=YP_001036090.1;Note=GC: 50.07%25%3B Codon Adaptation Index (CAI): 0.775.;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=YP_001036090.1;transl_table=11
NC_009009.1	RefSeq	gene	2173236	2174132	.	-	.	ID=gene2143;Dbxref=GeneID:4807844;Name=SSA_2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2175
NC_009009.1	RefSeq	CDS	2173236	2174132	.	-	0	ID=cds2070;Parent=gene2143;Dbxref=Genbank:YP_001036091.1,GeneID:4807844;Name=YP_001036091.1;Note=GC: 39.46%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.721.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036091.1;transl_table=11
NC_009009.1	RefSeq	gene	2174359	2175249	.	-	.	ID=gene2144;Dbxref=GeneID:4806279;Name=SSA_2176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2176
NC_009009.1	RefSeq	CDS	2174359	2175249	.	-	0	ID=cds2071;Parent=gene2144;Dbxref=Genbank:YP_001036092.1,GeneID:4806279;Name=YP_001036092.1;Note=GC: 39.62%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.771. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036092.1;transl_table=11
NC_009009.1	RefSeq	gene	2175322	2176305	.	-	.	ID=gene2145;Dbxref=GeneID:4805831;Name=SSA_2177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2177
NC_009009.1	RefSeq	CDS	2175322	2176305	.	-	0	ID=cds2072;Parent=gene2145;Dbxref=Genbank:YP_001036093.1,GeneID:4805831;Name=YP_001036093.1;Note=GC: 40.65%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.756. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036093.1;transl_table=11
NC_009009.1	RefSeq	gene	2176378	2177685	.	-	.	ID=gene2146;Dbxref=GeneID:4806484;Name=SSA_2178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2178
NC_009009.1	RefSeq	CDS	2176378	2177685	.	-	0	ID=cds2073;Parent=gene2146;Dbxref=Genbank:YP_001036094.1,GeneID:4806484;Name=YP_001036094.1;Note=GC: 36.31%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036094.1;transl_table=11
NC_009009.1	RefSeq	gene	2178194	2179207	.	-	.	ID=gene2147;Dbxref=GeneID:4806809;Name=SSA_2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2179
NC_009009.1	RefSeq	CDS	2178194	2179207	.	-	0	ID=cds2074;Parent=gene2147;Dbxref=Genbank:YP_001036095.1,GeneID:4806809;Name=YP_001036095.1;Note=GC: 44.87%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.788. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036095.1;transl_table=11
NC_009009.1	RefSeq	gene	2179238	2180173	.	-	.	ID=gene2148;Dbxref=GeneID:4806707;Name=SSA_2181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2181
NC_009009.1	RefSeq	CDS	2179238	2180173	.	-	0	ID=cds2075;Parent=gene2148;Dbxref=Genbank:YP_001036096.1,GeneID:4806707;Name=YP_001036096.1;Note=GC: 41.77%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036096.1;transl_table=11
NC_009009.1	RefSeq	gene	2180253	2181110	.	-	.	ID=gene2149;Dbxref=GeneID:4807949;Name=SSA_2182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2182
NC_009009.1	RefSeq	CDS	2180253	2181110	.	-	0	ID=cds2076;Parent=gene2149;Dbxref=Genbank:YP_001036097.1,GeneID:4807949;Name=YP_001036097.1;Note=GC: 41.26%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.784.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036097.1;transl_table=11
NC_009009.1	RefSeq	gene	2181245	2182627	.	-	.	ID=gene2150;Dbxref=GeneID:4806783;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SSA_2183
NC_009009.1	RefSeq	CDS	2181245	2182627	.	-	0	ID=cds2077;Parent=gene2150;Dbxref=Genbank:YP_001036098.1,GeneID:4806783;Name=YP_001036098.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=YP_001036098.1;transl_table=11
NC_009009.1	RefSeq	gene	2183262	2183334	.	-	.	ID=gene2151;Dbxref=GeneID:4805833;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=misc_RNA;locus_tag=SSA_2500
NC_009009.1	RefSeq	transcript	2183262	2183334	.	-	.	ID=rna69;Parent=gene2151;Dbxref=GeneID:4805833;Note=small cytoplasmic RNA involved in targeting of proteins to membranes%3B identified by similarity to Streptococcus mutans sequence (as described by Hasona%2C A. et al.%2C PNAS 2005%2C 103:17466-71)%3B curator(s): J. Alves;gbkey=misc_RNA;gene=ffs;product=component of signal recognition particle (SRP)
NC_009009.1	RefSeq	exon	2183262	2183334	.	-	.	ID=id70;Parent=rna69;Dbxref=GeneID:4805833;Note=small cytoplasmic RNA involved in targeting of proteins to membranes%3B identified by similarity to Streptococcus mutans sequence (as described by Hasona%2C A. et al.%2C PNAS 2005%2C 103:17466-71)%3B curator(s): J. Alves;gbkey=misc_RNA;gene=ffs;product=component of signal recognition particle (SRP)
NC_009009.1	RefSeq	gene	2183374	2183844	.	-	.	ID=gene2152;Dbxref=GeneID:4808028;Name=SSA_2184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2184
NC_009009.1	RefSeq	CDS	2183374	2183844	.	-	0	ID=cds2078;Parent=gene2152;Dbxref=Genbank:YP_001036099.1,GeneID:4808028;Name=YP_001036099.1;Note=GC: 46.71%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036099.1;transl_table=11
NC_009009.1	RefSeq	gene	2184088	2185380	.	-	.	ID=gene2153;Dbxref=GeneID:4807940;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=SSA_2185
NC_009009.1	RefSeq	CDS	2184088	2185380	.	-	0	ID=cds2079;Parent=gene2153;Dbxref=Genbank:YP_001036100.1,GeneID:4807940;Name=YP_001036100.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=YP_001036100.1;transl_table=11
NC_009009.1	RefSeq	gene	2185675	2187930	.	+	.	ID=gene2154;Dbxref=GeneID:4806439;Name=SSA_2186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2186
NC_009009.1	RefSeq	CDS	2185675	2187930	.	+	0	ID=cds2080;Parent=gene2154;Dbxref=Genbank:YP_001036101.1,GeneID:4806439;Name=YP_001036101.1;Note=Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine;gbkey=CDS;product=bifunctional glutamate--cysteine ligase/glutathione synthetase;protein_id=YP_001036101.1;transl_table=11
NC_009009.1	RefSeq	gene	2188166	2189011	.	+	.	ID=gene2155;Dbxref=GeneID:4807876;Name=SSA_2187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2187
NC_009009.1	RefSeq	CDS	2188166	2189011	.	+	0	ID=cds2081;Parent=gene2155;Dbxref=Genbank:YP_001036102.1,GeneID:4807876;Name=YP_001036102.1;Note=GC: 42.67%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=membrane associated protein;protein_id=YP_001036102.1;transl_table=11
NC_009009.1	RefSeq	gene	2189036	2190292	.	+	.	ID=gene2156;Dbxref=GeneID:4806248;Name=SSA_2188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2188
NC_009009.1	RefSeq	CDS	2189036	2190292	.	+	0	ID=cds2082;Parent=gene2156;Dbxref=Genbank:YP_001036103.1,GeneID:4806248;Name=YP_001036103.1;Note=GC: 43.12%25%3B Codon Adaptation Index (CAI): 0.803.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036103.1;transl_table=11
NC_009009.1	RefSeq	gene	2190369	2191187	.	-	.	ID=gene2157;Dbxref=GeneID:4807188;Name=SSA_2189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2189
NC_009009.1	RefSeq	CDS	2190369	2191187	.	-	0	ID=cds2083;Parent=gene2157;Dbxref=Genbank:YP_001036104.1,GeneID:4807188;Name=YP_001036104.1;Note=GC: 47.86%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036104.1;transl_table=11
NC_009009.1	RefSeq	gene	2191306	2192178	.	+	.	ID=gene2158;Dbxref=GeneID:4806993;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SSA_2190
NC_009009.1	RefSeq	CDS	2191306	2192178	.	+	0	ID=cds2084;Parent=gene2158;Dbxref=Genbank:YP_001036105.1,GeneID:4806993;Name=YP_001036105.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=Hsp33-like chaperonin;protein_id=YP_001036105.1;transl_table=11
NC_009009.1	RefSeq	gene	2192189	2193142	.	+	.	ID=gene2159;Dbxref=GeneID:4807113;Name=nifR;gbkey=Gene;gene=nifR;gene_biotype=protein_coding;locus_tag=SSA_2191
NC_009009.1	RefSeq	CDS	2192189	2193142	.	+	0	ID=cds2085;Parent=gene2159;Dbxref=Genbank:YP_001036106.1,GeneID:4807113;Name=YP_001036106.1;Note=GC: 48.64%25%3B Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;gene=nifR;product=hypothetical protein;protein_id=YP_001036106.1;transl_table=11
NC_009009.1	RefSeq	gene	2193183	2193932	.	-	.	ID=gene2160;Dbxref=GeneID:4807211;Name=SSA_2192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2192
NC_009009.1	RefSeq	CDS	2193183	2193932	.	-	0	ID=cds2086;Parent=gene2160;Dbxref=Genbank:YP_001036107.1,GeneID:4807211;Name=YP_001036107.1;Note=GC: 45.07%25%3B Codon Adaptation Index (CAI): 0.793. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.995)%3B Curator(s): T. Kitten %2C J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036107.1;transl_table=11
NC_009009.1	RefSeq	gene	2194101	2194883	.	-	.	ID=gene2161;Dbxref=GeneID:4806971;Name=SSA_2193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2193
NC_009009.1	RefSeq	CDS	2194101	2194883	.	-	0	ID=cds2087;Parent=gene2161;Dbxref=Genbank:YP_001036108.1,GeneID:4806971;Name=YP_001036108.1;Note=GC: 47.38%25%3B Codon Adaptation Index (CAI): 0.748. Curator(s): J. Alves;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=YP_001036108.1;transl_table=11
NC_009009.1	RefSeq	gene	2194938	2195753	.	-	.	ID=gene2162;Dbxref=GeneID:4807160;Name=SSA_2194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2194
NC_009009.1	RefSeq	CDS	2194938	2195753	.	-	0	ID=cds2088;Parent=gene2162;Dbxref=Genbank:YP_001036109.1,GeneID:4807160;Name=YP_001036109.1;Note=GC: 47.43%25%3B Transporter classification TC:9.A.4.1.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.76. Curator(s): J. Alves;gbkey=CDS;product=nicotinamide mononucleotide transporter;protein_id=YP_001036109.1;transl_table=11
NC_009009.1	RefSeq	gene	2195775	2196833	.	-	.	ID=gene2163;Dbxref=GeneID:4807149;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=SSA_2195
NC_009009.1	RefSeq	CDS	2195775	2196833	.	-	0	ID=cds2089;Parent=gene2163;Dbxref=Genbank:YP_001036110.1,GeneID:4807149;Name=YP_001036110.1;Note=GC: 45.33%25%3B Codon Adaptation Index (CAI): 0.804. Possibly involved in NAD metabolism. Curator(s): J. Alves;gbkey=CDS;gene=nadR;product=ATPase/kinase;protein_id=YP_001036110.1;transl_table=11
NC_009009.1	RefSeq	gene	2197019	2197420	.	-	.	ID=gene2164;Dbxref=GeneID:4806878;Name=SSA_2196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2196
NC_009009.1	RefSeq	CDS	2197019	2197420	.	-	0	ID=cds2090;Parent=gene2164;Dbxref=Genbank:YP_001036111.1,GeneID:4806878;Name=YP_001036111.1;Note=GC: 44.03%25%3B Codon Adaptation Index (CAI): 0.844. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036111.1;transl_table=11
NC_009009.1	RefSeq	gene	2197404	2197874	.	-	.	ID=gene2165;Dbxref=GeneID:4806856;Name=SSA_2197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2197
NC_009009.1	RefSeq	CDS	2197404	2197874	.	-	0	ID=cds2091;Parent=gene2165;Dbxref=Genbank:YP_001036112.1,GeneID:4806856;Name=YP_001036112.1;Note=GC: 42.89%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.706. SignalP prediction: Yes (prob. 0.53).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036112.1;transl_table=11
NC_009009.1	RefSeq	gene	2197932	2198675	.	-	.	ID=gene2166;Dbxref=GeneID:4807084;Name=SSA_2198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2198
NC_009009.1	RefSeq	CDS	2197932	2198675	.	-	0	ID=cds2092;Parent=gene2166;Dbxref=Genbank:YP_001036113.1,GeneID:4807084;Name=YP_001036113.1;Note=GC: 47.31%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036113.1;transl_table=11
NC_009009.1	RefSeq	gene	2198769	2201198	.	-	.	ID=gene2167;Dbxref=GeneID:4807228;Name=clpC;gbkey=Gene;gene=clpC;gene_biotype=protein_coding;locus_tag=SSA_2199
NC_009009.1	RefSeq	CDS	2198769	2201198	.	-	0	ID=cds2093;Parent=gene2167;Dbxref=Genbank:YP_001036114.1,GeneID:4807228;Name=YP_001036114.1;Note=GC: 50.16%25%3B Codon Adaptation Index (CAI): 0.776.;gbkey=CDS;gene=clpC;product=ATP-dependent Clp protease%2C ATP-binding subunit;protein_id=YP_001036114.1;transl_table=11
NC_009009.1	RefSeq	gene	2201199	2201663	.	-	.	ID=gene2168;Dbxref=GeneID:4807625;Name=ctsR;gbkey=Gene;gene=ctsR;gene_biotype=protein_coding;locus_tag=SSA_2200
NC_009009.1	RefSeq	CDS	2201199	2201663	.	-	0	ID=cds2094;Parent=gene2168;Dbxref=Genbank:YP_001036115.1,GeneID:4807625;Name=YP_001036115.1;Note=GC: 44.73%25%3B Codon Adaptation Index (CAI): 0.768. Curator(s): J. Alves;gbkey=CDS;gene=ctsR;product=CtsR family transcriptional regulator;protein_id=YP_001036115.1;transl_table=11
NC_009009.1	RefSeq	gene	2201947	2202297	.	+	.	ID=gene2169;Dbxref=GeneID:4807632;Name=SSA_2201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2201
NC_009009.1	RefSeq	CDS	2201947	2202297	.	+	0	ID=cds2095;Parent=gene2169;Dbxref=Genbank:YP_001036116.1,GeneID:4807632;Name=YP_001036116.1;Note=GC: 41.31%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.791.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036116.1;transl_table=11
NC_009009.1	RefSeq	gene	2202397	2203440	.	-	.	ID=gene2170;Dbxref=GeneID:4807931;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SSA_2202
NC_009009.1	RefSeq	CDS	2202397	2203440	.	-	0	ID=cds2096;Parent=gene2170;Dbxref=Genbank:YP_001036117.1,GeneID:4807931;Name=YP_001036117.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=YP_001036117.1;transl_table=11
NC_009009.1	RefSeq	gene	2203513	2204295	.	-	.	ID=gene2171;Dbxref=GeneID:4807749;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=SSA_2203
NC_009009.1	RefSeq	CDS	2203513	2204295	.	-	0	ID=cds2097;Parent=gene2171;Dbxref=Genbank:YP_001036118.1,GeneID:4807749;Name=YP_001036118.1;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=YP_001036118.1;transl_table=11
NC_009009.1	RefSeq	gene	2204603	2204673	.	+	.	ID=gene2172;Dbxref=GeneID:4807975;Name=SSA_2447;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2447
NC_009009.1	RefSeq	tRNA	2204603	2204673	.	+	.	ID=rna70;Parent=gene2172;Dbxref=GeneID:4807975;gbkey=tRNA;product=tRNA-Cys
NC_009009.1	RefSeq	exon	2204603	2204673	.	+	.	ID=id71;Parent=rna70;Dbxref=GeneID:4807975;gbkey=tRNA;product=tRNA-Cys
NC_009009.1	RefSeq	gene	2204803	2205567	.	+	.	ID=gene2173;Dbxref=GeneID:4807613;Name=SSA_2204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2204
NC_009009.1	RefSeq	CDS	2204803	2205567	.	+	0	ID=cds2098;Parent=gene2173;Dbxref=Genbank:YP_001036119.1,GeneID:4807613;Name=YP_001036119.1;Note=GC: 41.44%25%3B Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.954).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036119.1;transl_table=11
NC_009009.1	RefSeq	gene	2205654	2206190	.	-	.	ID=gene2174;Dbxref=GeneID:4808008;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SSA_2205
NC_009009.1	RefSeq	CDS	2205654	2206190	.	-	0	ID=cds2099;Parent=gene2174;Dbxref=Genbank:YP_001036120.1,GeneID:4808008;Name=YP_001036120.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription antitermination protein NusG;protein_id=YP_001036120.1;transl_table=11
NC_009009.1	RefSeq	gene	2206958	2207311	.	-	.	ID=gene2175;Dbxref=GeneID:4807861;Name=SSA_2207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2207
NC_009009.1	RefSeq	CDS	2206958	2207311	.	-	0	ID=cds2100;Parent=gene2175;Dbxref=Genbank:YP_001036121.1,GeneID:4807861;Name=YP_001036121.1;Note=GC: 52.54%25%3B Codon Adaptation Index (CAI): 0.684.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036121.1;transl_table=11
NC_009009.1	RefSeq	gene	2206979	2207335	.	+	.	ID=gene2176;Dbxref=GeneID:4807470;Name=SSA_2206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2206
NC_009009.1	RefSeq	CDS	2206979	2207335	.	+	0	ID=cds2101;Parent=gene2176;Dbxref=Genbank:YP_001036122.1,GeneID:4807470;Name=YP_001036122.1;Note=GC: 52.66%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.744.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036122.1;transl_table=11
NC_009009.1	RefSeq	gene	2207824	2208003	.	-	.	ID=gene2177;Dbxref=GeneID:4807502;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SSA_2208
NC_009009.1	RefSeq	CDS	2207824	2208003	.	-	0	ID=cds2102;Parent=gene2177;Dbxref=Genbank:YP_001036123.1,GeneID:4807502;Name=YP_001036123.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a  protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=YP_001036123.1;transl_table=11
NC_009009.1	RefSeq	gene	2208234	2210462	.	-	.	ID=gene2178;Dbxref=GeneID:4807490;Name=pbp2a;gbkey=Gene;gene=pbp2a;gene_biotype=protein_coding;locus_tag=SSA_2209
NC_009009.1	RefSeq	CDS	2208234	2210462	.	-	0	ID=cds2103;Parent=gene2178;Dbxref=Genbank:YP_001036124.1,GeneID:4807490;Name=YP_001036124.1;Note=GC: 47.78%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.78.;gbkey=CDS;gene=pbp2a;product=penicillin-binding protein 2A;protein_id=YP_001036124.1;transl_table=11
NC_009009.1	RefSeq	gene	2210615	2211514	.	+	.	ID=gene2179;Dbxref=GeneID:4807902;Name=SSA_2210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2210
NC_009009.1	RefSeq	CDS	2210615	2211514	.	+	0	ID=cds2104;Parent=gene2179;Dbxref=Genbank:YP_001036125.1,GeneID:4807902;Name=YP_001036125.1;Note=GC: 48.56%25%3B Codon Adaptation Index (CAI): 0.762.;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=YP_001036125.1;transl_table=11
NC_009009.1	RefSeq	gene	2211589	2212563	.	-	.	ID=gene2180;Dbxref=GeneID:4807464;Name=SSA_2211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2211
NC_009009.1	RefSeq	CDS	2211589	2212563	.	-	0	ID=cds2105;Parent=gene2180;Dbxref=Genbank:YP_001036126.1,GeneID:4807464;Name=YP_001036126.1;Note=GC: 41.64%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.719.;gbkey=CDS;product=transmembrane protein;protein_id=YP_001036126.1;transl_table=11
NC_009009.1	RefSeq	gene	2212717	2214018	.	-	.	ID=gene2181;Dbxref=GeneID:4807958;Name=SSA_2212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2212
NC_009009.1	RefSeq	CDS	2212717	2214018	.	-	0	ID=cds2106;Parent=gene2181;Dbxref=Genbank:YP_001036127.1,GeneID:4807958;Name=YP_001036127.1;Note=GC: 40.63%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=polysaccharide transport protein;protein_id=YP_001036127.1;transl_table=11
NC_009009.1	RefSeq	gene	2214137	2215201	.	-	.	ID=gene2182;Dbxref=GeneID:4807320;Name=SSA_2213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2213
NC_009009.1	RefSeq	CDS	2214137	2215201	.	-	0	ID=cds2107;Parent=gene2182;Dbxref=Genbank:YP_001036128.1,GeneID:4807320;Name=YP_001036128.1;Note=GC: 43.19%25%3B Codon Adaptation Index (CAI): 0.77.;gbkey=CDS;product=nucleotide sugar dehydratase;protein_id=YP_001036128.1;transl_table=11
NC_009009.1	RefSeq	gene	2215203	2215925	.	-	.	ID=gene2183;Dbxref=GeneID:4807690;Name=SSA_2214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2214
NC_009009.1	RefSeq	CDS	2215203	2215925	.	-	0	ID=cds2108;Parent=gene2183;Dbxref=Genbank:YP_001036129.1,GeneID:4807690;Name=YP_001036129.1;Note=GC: 43.15%25%3B Codon Adaptation Index (CAI): 0.773.;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_001036129.1;transl_table=11
NC_009009.1	RefSeq	gene	2215922	2217247	.	-	.	ID=gene2184;Dbxref=GeneID:4807638;Name=SSA_2215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2215
NC_009009.1	RefSeq	CDS	2215922	2217247	.	-	0	ID=cds2109;Parent=gene2184;Dbxref=Genbank:YP_001036130.1,GeneID:4807638;Name=YP_001036130.1;Note=GC: 37.18%25%3B Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.752. SignalP prediction: Yes (prob. 0.517)%3B Curator(s): T. Kitten;gbkey=CDS;product=oligosaccharide repeat-containing polymerase;protein_id=YP_001036130.1;transl_table=11
NC_009009.1	RefSeq	gene	2217247	2218170	.	-	.	ID=gene2185;Dbxref=GeneID:4807857;Name=licD1;gbkey=Gene;gene=licD1;gene_biotype=protein_coding;locus_tag=SSA_2216
NC_009009.1	RefSeq	CDS	2217247	2218170	.	-	0	ID=cds2110;Parent=gene2185;Dbxref=Genbank:YP_001036131.1,GeneID:4807857;Name=YP_001036131.1;Note=GC: 40.15%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;gene=licD1;product=LPS biosynthesis protein;protein_id=YP_001036131.1;transl_table=11
NC_009009.1	RefSeq	gene	2218176	2219135	.	-	.	ID=gene2186;Dbxref=GeneID:4807770;Name=SSA_2217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2217
NC_009009.1	RefSeq	CDS	2218176	2219135	.	-	0	ID=cds2111;Parent=gene2186;Dbxref=Genbank:YP_001036132.1,GeneID:4807770;Name=YP_001036132.1;Note=GC: 41.04%25%3B Codon Adaptation Index (CAI): 0.772.;gbkey=CDS;product=Cps9H;protein_id=YP_001036132.1;transl_table=11
NC_009009.1	RefSeq	gene	2219213	2220031	.	-	.	ID=gene2187;Dbxref=GeneID:4806811;Name=SSA_2218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2218
NC_009009.1	RefSeq	CDS	2219213	2220031	.	-	0	ID=cds2112;Parent=gene2187;Dbxref=Genbank:YP_001036133.1,GeneID:4806811;Name=YP_001036133.1;Note=GC: 41.88%25%3B Transporter classification TC:9.B.32.1.2. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.754. Curator(s): J. Alves;gbkey=CDS;product=glycosyltransferase (cell wall biogenesis) Cps9G;protein_id=YP_001036133.1;transl_table=11
NC_009009.1	RefSeq	gene	2220057	2220917	.	-	.	ID=gene2188;Dbxref=GeneID:4806700;Name=SSA_2219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2219
NC_009009.1	RefSeq	CDS	2220057	2220917	.	-	0	ID=cds2113;Parent=gene2188;Dbxref=Genbank:YP_001036134.1,GeneID:4806700;Name=YP_001036134.1;Note=GC: 41.35%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=YP_001036134.1;transl_table=11
NC_009009.1	RefSeq	gene	2220924	2221529	.	-	.	ID=gene2189;Dbxref=GeneID:4806838;Name=SSA_2220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2220
NC_009009.1	RefSeq	CDS	2220924	2221529	.	-	0	ID=cds2114;Parent=gene2189;Dbxref=Genbank:YP_001036135.1,GeneID:4806838;Name=YP_001036135.1;Note=GC: 41.42%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.8. SignalP prediction: Yes (prob. 0.989).;gbkey=CDS;product=galactosyltransferase;protein_id=YP_001036135.1;transl_table=11
NC_009009.1	RefSeq	gene	2221545	2223347	.	-	.	ID=gene2190;Dbxref=GeneID:4806749;Name=capD;gbkey=Gene;gene=capD;gene_biotype=protein_coding;locus_tag=SSA_2221
NC_009009.1	RefSeq	CDS	2221545	2223347	.	-	0	ID=cds2115;Parent=gene2190;Dbxref=Genbank:YP_001036136.1,GeneID:4806749;Name=YP_001036136.1;Note=GC: 42.48%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.757.;gbkey=CDS;gene=capD;product=Cps9E;protein_id=YP_001036136.1;transl_table=11
NC_009009.1	RefSeq	gene	2223389	2224087	.	-	.	ID=gene2191;Dbxref=GeneID:4807313;Name=SSA_2222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2222
NC_009009.1	RefSeq	CDS	2223389	2224087	.	-	0	ID=cds2116;Parent=gene2191;Dbxref=Genbank:YP_001036137.1,GeneID:4807313;Name=YP_001036137.1;Note=GC: 45.06%25%3B Transporter classification TC:8.A.3.2.2. Codon Adaptation Index (CAI): 0.757. Curator(s): J. Alves;gbkey=CDS;product=tyrosine-protein kinase Wze;protein_id=YP_001036137.1;transl_table=11
NC_009009.1	RefSeq	gene	2224098	2224793	.	-	.	ID=gene2192;Dbxref=GeneID:4806116;Name=SSA_2223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2223
NC_009009.1	RefSeq	CDS	2224098	2224793	.	-	0	ID=cds2117;Parent=gene2192;Dbxref=Genbank:YP_001036138.1,GeneID:4806116;Name=YP_001036138.1;Note=GC: 46.12%25%3B Transporter classification TC:8.A.3.2.1. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.787. Curator(s): J. Alves;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Wzd (chain length regulator);protein_id=YP_001036138.1;transl_table=11
NC_009009.1	RefSeq	gene	2224801	2225532	.	-	.	ID=gene2193;Dbxref=GeneID:4806362;Name=SSA_2224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2224
NC_009009.1	RefSeq	CDS	2224801	2225532	.	-	0	ID=cds2118;Parent=gene2193;Dbxref=Genbank:YP_001036139.1,GeneID:4806362;Name=YP_001036139.1;Note=GC: 44.81%25%3B Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=phosphotyrosine-protein phosphatase;protein_id=YP_001036139.1;transl_table=11
NC_009009.1	RefSeq	gene	2225529	2227037	.	-	.	ID=gene2194;Dbxref=GeneID:4806334;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=SSA_2225
NC_009009.1	RefSeq	CDS	2225529	2227037	.	-	0	ID=cds2119;Parent=gene2194;Dbxref=Genbank:YP_001036140.1,GeneID:4806334;Name=YP_001036140.1;Note=GC: 43.61%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.774. SignalP prediction: Yes (prob. 0.997). Capsular polysaccharide biosynthesis transcriptional attenuator. Curator(s): J. Alves;gbkey=CDS;gene=cpsA;product=LytR family transcriptional regulator;protein_id=YP_001036140.1;transl_table=11
NC_009009.1	RefSeq	gene	2227241	2227846	.	-	.	ID=gene2195;Dbxref=GeneID:4806596;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=SSA_2226
NC_009009.1	RefSeq	CDS	2227241	2227846	.	-	0	ID=cds2120;Parent=gene2195;Dbxref=Genbank:YP_001036141.1,GeneID:4806596;Name=YP_001036141.1;Note=GC: 49.83%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): J. Alves;gbkey=CDS;gene=nrdG;product=organic radical activating chaperone;protein_id=YP_001036141.1;transl_table=11
NC_009009.1	RefSeq	gene	2227806	2228351	.	-	.	ID=gene2196;Dbxref=GeneID:4806671;Name=SSA_2227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2227
NC_009009.1	RefSeq	CDS	2227806	2228351	.	-	0	ID=cds2121;Parent=gene2196;Dbxref=Genbank:YP_001036142.1,GeneID:4806671;Name=YP_001036142.1;Note=GC: 46.7%25%3B Codon Adaptation Index (CAI): 0.758.;gbkey=CDS;product=acetyl transferase;protein_id=YP_001036142.1;transl_table=11
NC_009009.1	RefSeq	gene	2228361	2228858	.	-	.	ID=gene2197;Dbxref=GeneID:4806098;Name=SSA_2228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2228
NC_009009.1	RefSeq	CDS	2228361	2228858	.	-	0	ID=cds2122;Parent=gene2197;Dbxref=Genbank:YP_001036143.1,GeneID:4806098;Name=YP_001036143.1;Note=GC: 49.4%25%3B Codon Adaptation Index (CAI): 0.741. Curator(s): J. Alves;gbkey=CDS;product=acetyltransferase;protein_id=YP_001036143.1;transl_table=11
NC_009009.1	RefSeq	gene	2228911	2229084	.	-	.	ID=gene2198;Dbxref=GeneID:4805920;Name=SSA_2229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2229
NC_009009.1	RefSeq	CDS	2228911	2229084	.	-	0	ID=cds2123;Parent=gene2198;Dbxref=Genbank:YP_001036144.1,GeneID:4805920;Name=YP_001036144.1;Note=GC: 40.8%25%3B Codon Adaptation Index (CAI): 0.789.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036144.1;transl_table=11
NC_009009.1	RefSeq	gene	2229053	2231248	.	-	.	ID=gene2199;Dbxref=GeneID:4806195;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=SSA_2230
NC_009009.1	RefSeq	CDS	2229053	2231248	.	-	0	ID=cds2124;Parent=gene2199;Dbxref=Genbank:YP_001036145.1,GeneID:4806195;Name=YP_001036145.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside triphosphate reductase;protein_id=YP_001036145.1;transl_table=11
NC_009009.1	RefSeq	gene	2231471	2233018	.	-	.	ID=gene2200;Dbxref=GeneID:4806545;Name=SSA_2231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2231
NC_009009.1	RefSeq	CDS	2231471	2233018	.	-	0	ID=cds2125;Parent=gene2200;Dbxref=Genbank:YP_001036146.1,GeneID:4806545;Name=YP_001036146.1;Note=GC: 45.16%25%3B Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.783.;gbkey=CDS;product=Heme/copper-type cytochrome/quinol oxidases subunit 1;protein_id=YP_001036146.1;transl_table=11
NC_009009.1	RefSeq	gene	2233057	2233200	.	-	.	ID=gene2201;Dbxref=GeneID:4805842;Name=SSA_2233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2233
NC_009009.1	RefSeq	CDS	2233057	2233200	.	-	0	ID=cds2126;Parent=gene2201;Dbxref=Genbank:YP_001036147.1,GeneID:4805842;Name=YP_001036147.1;Note=GC: 43.06%25%3B Codon Adaptation Index (CAI): 0.726. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036147.1;transl_table=11
NC_009009.1	RefSeq	gene	2233331	2234866	.	-	.	ID=gene2202;Dbxref=GeneID:4806672;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=SSA_2234
NC_009009.1	RefSeq	CDS	2233331	2234866	.	-	0	ID=cds2127;Parent=gene2202;Dbxref=Genbank:YP_001036148.1,GeneID:4806672;Name=YP_001036148.1;Note=GC: 45.7%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.789. SignalP prediction: Yes (prob. 0.477).;gbkey=CDS;gene=cls;product=phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein;protein_id=YP_001036148.1;transl_table=11
NC_009009.1	RefSeq	gene	2235061	2235540	.	-	.	ID=gene2203;Dbxref=GeneID:4805825;Name=SSA_2235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2235
NC_009009.1	RefSeq	CDS	2235061	2235540	.	-	0	ID=cds2128;Parent=gene2203;Dbxref=Genbank:YP_001036149.1,GeneID:4805825;Name=YP_001036149.1;Note=GC: 48.75%25%3B Codon Adaptation Index (CAI): 0.798. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036149.1;transl_table=11
NC_009009.1	RefSeq	gene	2235598	2236830	.	-	.	ID=gene2204;Dbxref=GeneID:4806692;Name=SSA_2237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2237
NC_009009.1	RefSeq	CDS	2235598	2236830	.	-	0	ID=cds2129;Parent=gene2204;Dbxref=Genbank:YP_001036150.1,GeneID:4806692;Name=YP_001036150.1;Note=GC: 48.66%25%3B Codon Adaptation Index (CAI): 0.763.;gbkey=CDS;product=dihydrofolate:folylpolyglutamate synthetase;protein_id=YP_001036150.1;transl_table=11
NC_009009.1	RefSeq	gene	2237012	2237323	.	-	.	ID=gene2205;Dbxref=GeneID:4806729;Name=SSA_2239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2239
NC_009009.1	RefSeq	CDS	2237012	2237323	.	-	0	ID=cds2130;Parent=gene2205;Dbxref=Genbank:YP_001036151.1,GeneID:4806729;Name=YP_001036151.1;Note=GC: 41.67%25%3B Codon Adaptation Index (CAI): 0.813.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036151.1;transl_table=11
NC_009009.1	RefSeq	gene	2237348	2237767	.	-	.	ID=gene2206;Dbxref=GeneID:4806243;Name=SSA_2240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2240
NC_009009.1	RefSeq	CDS	2237348	2237767	.	-	0	ID=cds2131;Parent=gene2206;Dbxref=Genbank:YP_001036152.1,GeneID:4806243;Name=YP_001036152.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction resolvase-like protein;protein_id=YP_001036152.1;transl_table=11
NC_009009.1	RefSeq	gene	2237767	2238033	.	-	.	ID=gene2207;Dbxref=GeneID:4805828;Name=SSA_2241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2241
NC_009009.1	RefSeq	CDS	2237767	2238033	.	-	0	ID=cds2132;Parent=gene2207;Dbxref=Genbank:YP_001036153.1,GeneID:4805828;Name=YP_001036153.1;Note=GC: 41.95%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036153.1;transl_table=11
NC_009009.1	RefSeq	gene	2238211	2238753	.	-	.	ID=gene2208;Dbxref=GeneID:4806397;Name=SSA_2242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2242
NC_009009.1	RefSeq	CDS	2238211	2238753	.	-	0	ID=cds2133;Parent=gene2208;Dbxref=Genbank:YP_001036154.1,GeneID:4806397;Name=YP_001036154.1;Note=GC: 43.83%25%3B Codon Adaptation Index (CAI): 0.788. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036154.1;transl_table=11
NC_009009.1	RefSeq	gene	2238859	2239431	.	-	.	ID=gene2209;Dbxref=GeneID:4806153;Name=SSA_2243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2243
NC_009009.1	RefSeq	CDS	2238859	2239431	.	-	0	ID=cds2134;Parent=gene2209;Dbxref=Genbank:YP_001036155.1,GeneID:4806153;Name=YP_001036155.1;Note=GC: 43.46%25%3B Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.995).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036155.1;transl_table=11
NC_009009.1	RefSeq	gene	2239567	2239965	.	-	.	ID=gene2210;Dbxref=GeneID:4806005;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;gene_synonym=yjbD;locus_tag=SSA_2244
NC_009009.1	RefSeq	CDS	2239567	2239965	.	-	0	ID=cds2135;Parent=gene2210;Dbxref=Genbank:YP_001036156.1,GeneID:4806005;Name=YP_001036156.1;Note=the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters%3B in Bacillus subtilis this protein is a substrate for ClpXP protease%3B blocks transcription of the competence regulatory gene encoded by the srf operon%3B regulates a number of genes involved in thiol homeostasis including trxA and trxB%3B monomeric member of ArsC family of proteins%3B does not bind DNA%3B contains a disulfide bond between C10 and C13 which may sense disulfide stress;gbkey=CDS;gene=spxA;product=Spx family transcriptional regulator;protein_id=YP_001036156.1;transl_table=11
NC_009009.1	RefSeq	gene	2240051	2241199	.	-	.	ID=gene2211;Dbxref=GeneID:4805913;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SSA_2245
NC_009009.1	RefSeq	CDS	2240051	2241199	.	-	0	ID=cds2136;Parent=gene2211;Dbxref=Genbank:YP_001036157.1,GeneID:4805913;Name=YP_001036157.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=recombinase A;protein_id=YP_001036157.1;transl_table=11
NC_009009.1	RefSeq	gene	2241258	2242586	.	-	.	ID=gene2212;Dbxref=GeneID:4806702;Name=cinA;gbkey=Gene;gene=cinA;gene_biotype=protein_coding;locus_tag=SSA_2246
NC_009009.1	RefSeq	CDS	2241258	2242586	.	-	0	ID=cds2137;Parent=gene2212;Dbxref=Genbank:YP_001036158.1,GeneID:4806702;Name=YP_001036158.1;Note=GC: 47.33%25%3B Codon Adaptation Index (CAI): 0.77. Helix-turn-helix prediction: AraC.;gbkey=CDS;gene=cinA;product=competence damage-inducible protein A;protein_id=YP_001036158.1;transl_table=11
NC_009009.1	RefSeq	gene	2242785	2243195	.	+	.	ID=gene2213;Dbxref=GeneID:4805904;Name=SSA_2247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2247
NC_009009.1	RefSeq	CDS	2242785	2243195	.	+	0	ID=cds2138;Parent=gene2213;Dbxref=Genbank:YP_001036159.1,GeneID:4805904;Name=YP_001036159.1;Note=GC: 42.82%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.77. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036159.1;transl_table=11
NC_009009.1	RefSeq	gene	2243408	2243899	.	-	.	ID=gene2214;Dbxref=GeneID:4805940;Name=SSA_2248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2248
NC_009009.1	RefSeq	CDS	2243408	2243899	.	-	0	ID=cds2139;Parent=gene2214;Dbxref=Genbank:YP_001036160.1,GeneID:4805940;Name=YP_001036160.1;Note=GC: 30.28%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.547).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036160.1;transl_table=11
NC_009009.1	RefSeq	gene	2243896	2244519	.	-	.	ID=gene2215;Dbxref=GeneID:4806111;Name=SSA_2249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2249
NC_009009.1	RefSeq	CDS	2243896	2244519	.	-	0	ID=cds2140;Parent=gene2215;Dbxref=Genbank:YP_001036161.1,GeneID:4806111;Name=YP_001036161.1;Note=GC: 32.21%25%3B Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.731. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter ATPase;protein_id=YP_001036161.1;transl_table=11
NC_009009.1	RefSeq	gene	2244519	2246501	.	-	.	ID=gene2216;Dbxref=GeneID:4805884;Name=SSA_2250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2250
NC_009009.1	RefSeq	CDS	2244519	2246501	.	-	0	ID=cds2141;Parent=gene2216;Dbxref=Genbank:YP_001036162.1,GeneID:4805884;Name=YP_001036162.1;Note=GC: 31.27%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.732. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998)%3B Curator(s): J. Alves;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_001036162.1;transl_table=11
NC_009009.1	RefSeq	gene	2247209	2248057	.	+	.	ID=gene2217;Dbxref=GeneID:4805826;Name=SSA_2251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2251
NC_009009.1	RefSeq	CDS	2247209	2248057	.	+	0	ID=cds2142;Parent=gene2217;Dbxref=Genbank:YP_001036163.1,GeneID:4805826;Name=YP_001036163.1;Note=GC: 32.27%25%3B Codon Adaptation Index (CAI): 0.763. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036163.1;transl_table=11
NC_009009.1	RefSeq	gene	2248302	2248739	.	-	.	ID=gene2218;Dbxref=GeneID:4805841;Name=SSA_2252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2252
NC_009009.1	RefSeq	CDS	2248302	2248739	.	-	0	ID=cds2143;Parent=gene2218;Dbxref=Genbank:YP_001036164.1,GeneID:4805841;Name=YP_001036164.1;Note=GC: 41.78%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.745.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036164.1;transl_table=11
NC_009009.1	RefSeq	gene	2248960	2249514	.	-	.	ID=gene2219;Dbxref=GeneID:4806295;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=SSA_2253
NC_009009.1	RefSeq	CDS	2248960	2249514	.	-	0	ID=cds2144;Parent=gene2219;Dbxref=Genbank:YP_001036165.1,GeneID:4806295;Name=YP_001036165.1;Note=GC: 40.54%25%3B Codon Adaptation Index (CAI): 0.813.;gbkey=CDS;gene=tag;product=3-methyladenine DNA glycosylase;protein_id=YP_001036165.1;transl_table=11
NC_009009.1	RefSeq	gene	2249524	2250114	.	-	.	ID=gene2220;Dbxref=GeneID:4806058;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=SSA_2254
NC_009009.1	RefSeq	CDS	2249524	2250114	.	-	0	ID=cds2145;Parent=gene2220;Dbxref=Genbank:YP_001036166.1,GeneID:4806058;Name=YP_001036166.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=YP_001036166.1;transl_table=11
NC_009009.1	RefSeq	gene	2250284	2250790	.	+	.	ID=gene2221;Dbxref=GeneID:4806272;Name=SSA_2255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2255
NC_009009.1	RefSeq	CDS	2250284	2250790	.	+	0	ID=cds2146;Parent=gene2221;Dbxref=Genbank:YP_001036167.1,GeneID:4806272;Name=YP_001036167.1;Note=GC: 40.24%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001036167.1;transl_table=11
NC_009009.1	RefSeq	gene	2250744	2251295	.	+	.	ID=gene2222;Dbxref=GeneID:4806326;Name=SSA_2256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2256
NC_009009.1	RefSeq	CDS	2250744	2251295	.	+	0	ID=cds2147;Parent=gene2222;Dbxref=Genbank:YP_001036168.1,GeneID:4806326;Name=YP_001036168.1;Note=GC: 43.12%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.756.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036168.1;transl_table=11
NC_009009.1	RefSeq	gene	2251331	2253274	.	-	.	ID=gene2223;Dbxref=GeneID:4805843;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=SSA_2257
NC_009009.1	RefSeq	CDS	2251331	2253274	.	-	0	ID=cds2148;Parent=gene2223;Dbxref=Genbank:YP_001036169.1,GeneID:4805843;Name=YP_001036169.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;product=DNA mismatch repair protein;protein_id=YP_001036169.1;transl_table=11
NC_009009.1	RefSeq	gene	2253479	2254789	.	-	.	ID=gene2224;Dbxref=GeneID:4805885;Name=SSA_2258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2258
NC_009009.1	RefSeq	CDS	2253479	2254789	.	-	0	ID=cds2149;Parent=gene2224;Dbxref=Genbank:YP_001036170.1,GeneID:4805885;Name=YP_001036170.1;Note=GC: 40.73%25%3B Codon Adaptation Index (CAI): 0.801. Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036170.1;transl_table=11
NC_009009.1	RefSeq	gene	2254817	2255512	.	-	.	ID=gene2225;Dbxref=GeneID:4807560;Name=SSA_2259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2259
NC_009009.1	RefSeq	CDS	2254817	2255512	.	-	0	ID=cds2150;Parent=gene2225;Dbxref=Genbank:YP_001036171.1,GeneID:4807560;Name=YP_001036171.1;Note=GC: 35.34%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036171.1;transl_table=11
NC_009009.1	RefSeq	gene	2255691	2258240	.	-	.	ID=gene2226;Dbxref=GeneID:4807715;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=SSA_2260
NC_009009.1	RefSeq	CDS	2255691	2258240	.	-	0	ID=cds2151;Parent=gene2226;Dbxref=Genbank:YP_001036172.1,GeneID:4807715;Name=YP_001036172.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;gene=mutS;product=DNA mismatch repair protein MutS;protein_id=YP_001036172.1;transl_table=11
NC_009009.1	RefSeq	gene	2258319	2258756	.	-	.	ID=gene2227;Dbxref=GeneID:4806712;Name=SSA_2261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2261
NC_009009.1	RefSeq	CDS	2258319	2258756	.	-	0	ID=cds2152;Parent=gene2227;Dbxref=Genbank:YP_001036173.1,GeneID:4806712;Name=YP_001036173.1;Note=GC: 46.58%25%3B Codon Adaptation Index (CAI): 0.752. Curator(s): J. Alves;gbkey=CDS;product=transcriptional repressor (arginine synthesis);protein_id=YP_001036173.1;transl_table=11
NC_009009.1	RefSeq	gene	2259057	2260745	.	+	.	ID=gene2228;Dbxref=GeneID:4806521;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=SSA_2262
NC_009009.1	RefSeq	CDS	2259057	2260745	.	+	0	ID=cds2153;Parent=gene2228;Dbxref=Genbank:YP_001036174.1,GeneID:4806521;Name=YP_001036174.1;Note=catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=YP_001036174.1;transl_table=11
NC_009009.1	RefSeq	gene	2260778	2261266	.	-	.	ID=gene2229;Dbxref=GeneID:4806567;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SSA_2263
NC_009009.1	RefSeq	CDS	2260778	2261266	.	-	0	ID=cds2154;Parent=gene2229;Dbxref=Genbank:YP_001036175.1,GeneID:4806567;Name=YP_001036175.1;Note=has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=flavoprotein NrdI;protein_id=YP_001036175.1;transl_table=11
NC_009009.1	RefSeq	gene	2261329	2261847	.	-	.	ID=gene2230;Dbxref=GeneID:4806618;Name=SSA_2264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2264
NC_009009.1	RefSeq	CDS	2261329	2261847	.	-	0	ID=cds2155;Parent=gene2230;Dbxref=Genbank:YP_001036176.1,GeneID:4806618;Name=YP_001036176.1;Note=GC: 39.69%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.711. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.967)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036176.1;transl_table=11
NC_009009.1	RefSeq	gene	2262026	2264287	.	-	.	ID=gene2231;Dbxref=GeneID:4806369;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=SSA_2265
NC_009009.1	RefSeq	CDS	2262026	2264287	.	-	0	ID=cds2156;Parent=gene2231;Dbxref=Genbank:YP_001036177.1,GeneID:4806369;Name=YP_001036177.1;Note=GC: 45%25%3B Codon Adaptation Index (CAI): 0.779.;gbkey=CDS;gene=malP;product=maltodextrin phosphorylase;protein_id=YP_001036177.1;transl_table=11
NC_009009.1	RefSeq	gene	2264320	2265831	.	-	.	ID=gene2232;Dbxref=GeneID:4807407;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=SSA_2266
NC_009009.1	RefSeq	CDS	2264320	2265831	.	-	0	ID=cds2157;Parent=gene2232;Dbxref=Genbank:YP_001036178.1,GeneID:4807407;Name=YP_001036178.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=YP_001036178.1;transl_table=11
NC_009009.1	RefSeq	gene	2266267	2267250	.	+	.	ID=gene2233;Dbxref=GeneID:4806599;Name=malR;gbkey=Gene;gene=malR;gene_biotype=protein_coding;locus_tag=SSA_2267
NC_009009.1	RefSeq	CDS	2266267	2267250	.	+	0	ID=cds2158;Parent=gene2233;Dbxref=Genbank:YP_001036179.1,GeneID:4806599;Name=YP_001036179.1;Note=GC: 46.95%25%3B Codon Adaptation Index (CAI): 0.754. Helix-turn-helix prediction: LysR\AraC. Curator(s): J. Alves;gbkey=CDS;gene=malR;product=lactose operon transcriptional repressor%2C LacI family;protein_id=YP_001036179.1;transl_table=11
NC_009009.1	RefSeq	gene	2267368	2269446	.	+	.	ID=gene2234;Dbxref=GeneID:4806735;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=SSA_2268
NC_009009.1	RefSeq	CDS	2267368	2269446	.	+	0	ID=cds2159;Parent=gene2234;Dbxref=Genbank:YP_001036180.1,GeneID:4806735;Name=YP_001036180.1;Note=GC: 47.76%25%3B Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;gene=pulA;product=Type II secretory pathway%2C pullulanase PulA glycosidase;protein_id=YP_001036180.1;transl_table=11
NC_009009.1	RefSeq	gene	2269482	2270417	.	-	.	ID=gene2235;Dbxref=GeneID:4805935;Name=SSA_2269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2269
NC_009009.1	RefSeq	CDS	2269482	2270417	.	-	0	ID=cds2160;Parent=gene2235;Dbxref=Genbank:YP_001036181.1,GeneID:4805935;Name=YP_001036181.1;Note=GC: 44.44%25%3B Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036181.1;transl_table=11
NC_009009.1	RefSeq	gene	2270404	2272158	.	-	.	ID=gene2236;Dbxref=GeneID:4806519;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=SSA_2270
NC_009009.1	RefSeq	CDS	2270404	2272158	.	-	0	ID=cds2161;Parent=gene2236;Dbxref=Genbank:YP_001036182.1,GeneID:4806519;Name=YP_001036182.1;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=YP_001036182.1;transl_table=11
NC_009009.1	RefSeq	gene	2272328	2272540	.	-	.	ID=gene2237;Dbxref=GeneID:4807328;Name=SSA_2271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2271
NC_009009.1	RefSeq	CDS	2272328	2272540	.	-	0	ID=cds2162;Parent=gene2237;Dbxref=Genbank:YP_001036183.1,GeneID:4807328;Name=YP_001036183.1;Note=GC: 45.54%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.791)%3B Curator(s): T. Kitten;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036183.1;transl_table=11
NC_009009.1	RefSeq	gene	2272667	2272966	.	-	.	ID=gene2238;Dbxref=GeneID:4806928;Name=SSA_2272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2272
NC_009009.1	RefSeq	CDS	2272667	2272966	.	-	0	ID=cds2163;Parent=gene2238;Dbxref=Genbank:YP_001036184.1,GeneID:4806928;Name=YP_001036184.1;Note=GC: 34%25%3B Codon Adaptation Index (CAI): 0.792.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036184.1;transl_table=11
NC_009009.1	RefSeq	gene	2272987	2273658	.	-	.	ID=gene2239;Dbxref=GeneID:4807218;Name=SSA_2273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2273
NC_009009.1	RefSeq	CDS	2272987	2273658	.	-	0	ID=cds2164;Parent=gene2239;Dbxref=Genbank:YP_001036185.1,GeneID:4807218;Name=YP_001036185.1;Note=GC: 32.14%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.757.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036185.1;transl_table=11
NC_009009.1	RefSeq	gene	2273652	2275322	.	-	.	ID=gene2240;Dbxref=GeneID:4807184;Name=SSA_2274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2274
NC_009009.1	RefSeq	CDS	2273652	2275322	.	-	0	ID=cds2165;Parent=gene2240;Dbxref=Genbank:YP_001036186.1,GeneID:4807184;Name=YP_001036186.1;Note=GC: 40.81%25%3B Codon Adaptation Index (CAI): 0.759. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036186.1;transl_table=11
NC_009009.1	RefSeq	gene	2275315	2275680	.	-	.	ID=gene2241;Dbxref=GeneID:4807275;Name=SSA_2275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2275
NC_009009.1	RefSeq	CDS	2275315	2275680	.	-	0	ID=cds2166;Parent=gene2241;Dbxref=Genbank:YP_001036187.1,GeneID:4807275;Name=YP_001036187.1;Note=GC: 37.43%25%3B Codon Adaptation Index (CAI): 0.746.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036187.1;transl_table=11
NC_009009.1	RefSeq	gene	2275677	2276063	.	-	.	ID=gene2242;Dbxref=GeneID:4807286;Name=SSA_2276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2276
NC_009009.1	RefSeq	CDS	2275677	2276063	.	-	0	ID=cds2167;Parent=gene2242;Dbxref=Genbank:YP_001036188.1,GeneID:4807286;Name=YP_001036188.1;Note=GC: 42.12%25%3B Codon Adaptation Index (CAI): 0.758.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036188.1;transl_table=11
NC_009009.1	RefSeq	gene	2276073	2280497	.	-	.	ID=gene2243;Dbxref=GeneID:4807027;Name=SSA_2277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2277
NC_009009.1	RefSeq	CDS	2276073	2280497	.	-	0	ID=cds2168;Parent=gene2243;Dbxref=Genbank:YP_001036189.1,GeneID:4807027;Name=YP_001036189.1;Note=GC: 49.69%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=DNA segregation ATPase FtsK/SpoIIIE family protein;protein_id=YP_001036189.1;transl_table=11
NC_009009.1	RefSeq	gene	2280500	2281759	.	-	.	ID=gene2244;Dbxref=GeneID:4807090;Name=ukp;gbkey=Gene;gene=ukp;gene_biotype=protein_coding;locus_tag=SSA_2278
NC_009009.1	RefSeq	CDS	2280500	2281759	.	-	0	ID=cds2169;Parent=gene2244;Dbxref=Genbank:YP_001036190.1,GeneID:4807090;Name=YP_001036190.1;Note=GC: 45.48%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.;gbkey=CDS;gene=ukp;product=Ukp protein;protein_id=YP_001036190.1;transl_table=11
NC_009009.1	RefSeq	gene	2281761	2282000	.	-	.	ID=gene2245;Dbxref=GeneID:4807232;Name=SSA_2279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2279
NC_009009.1	RefSeq	CDS	2281761	2282000	.	-	0	ID=cds2170;Parent=gene2245;Dbxref=Genbank:YP_001036191.1,GeneID:4807232;Name=YP_001036191.1;Note=GC: 42.92%25%3B Codon Adaptation Index (CAI): 0.815.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036191.1;transl_table=11
NC_009009.1	RefSeq	gene	2282002	2282460	.	-	.	ID=gene2246;Dbxref=GeneID:4806959;Name=SSA_2281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2281
NC_009009.1	RefSeq	CDS	2282002	2282460	.	-	0	ID=cds2171;Parent=gene2246;Dbxref=Genbank:YP_001036192.1,GeneID:4806959;Name=YP_001036192.1;Note=GC: 43.14%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.743. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036192.1;transl_table=11
NC_009009.1	RefSeq	gene	2282467	2285427	.	-	.	ID=gene2247;Dbxref=GeneID:4807555;Name=SSA_2282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2282
NC_009009.1	RefSeq	CDS	2282467	2285427	.	-	0	ID=cds2172;Parent=gene2247;Dbxref=Genbank:YP_001036193.1,GeneID:4807555;Name=YP_001036193.1;Note=GC: 40.76%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=Phage infection protein;protein_id=YP_001036193.1;transl_table=11
NC_009009.1	RefSeq	gene	2285627	2285914	.	-	.	ID=gene2248;Dbxref=GeneID:4807888;Name=SSA_2283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2283
NC_009009.1	RefSeq	CDS	2285627	2285914	.	-	0	ID=cds2173;Parent=gene2248;Dbxref=Genbank:YP_001036194.1,GeneID:4807888;Name=YP_001036194.1;Note=GC: 35.76%25%3B Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036194.1;transl_table=11
NC_009009.1	RefSeq	gene	2286082	2287362	.	-	.	ID=gene2249;Dbxref=GeneID:4807706;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SSA_2284
NC_009009.1	RefSeq	CDS	2286082	2287362	.	-	0	ID=cds2174;Parent=gene2249;Dbxref=Genbank:YP_001036195.1,GeneID:4807706;Name=YP_001036195.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=YP_001036195.1;transl_table=11
NC_009009.1	RefSeq	gene	2287544	2287885	.	+	.	ID=gene2250;Dbxref=GeneID:4808026;Name=SSA_2285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2285
NC_009009.1	RefSeq	CDS	2287544	2287885	.	+	0	ID=cds2175;Parent=gene2250;Dbxref=Genbank:YP_001036196.1,GeneID:4808026;Name=YP_001036196.1;Note=GC: 47.08%25%3B Codon Adaptation Index (CAI): 0.775.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036196.1;transl_table=11
NC_009009.1	RefSeq	gene	2287968	2289686	.	-	.	ID=gene2251;Dbxref=GeneID:4807755;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=SSA_2286
NC_009009.1	RefSeq	CDS	2287968	2289686	.	-	0	ID=cds2176;Parent=gene2251;Dbxref=Genbank:YP_001036197.1,GeneID:4807755;Name=YP_001036197.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=ilvD;product=dihydroxy-acid dehydratase;protein_id=YP_001036197.1;transl_table=11
NC_009009.1	RefSeq	gene	2289961	2290143	.	+	.	ID=gene2252;Dbxref=GeneID:4807535;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SSA_2287
NC_009009.1	RefSeq	CDS	2289961	2290143	.	+	0	ID=cds2177;Parent=gene2252;Dbxref=Genbank:YP_001036198.1,GeneID:4807535;Name=YP_001036198.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=YP_001036198.1;transl_table=11
NC_009009.1	RefSeq	gene	2290601	2291215	.	+	.	ID=gene2253;Dbxref=GeneID:4807252;Name=cadD2;gbkey=Gene;gene=cadD2;gene_biotype=protein_coding;locus_tag=SSA_2288
NC_009009.1	RefSeq	CDS	2290601	2291215	.	+	0	ID=cds2178;Parent=gene2253;Dbxref=Genbank:YP_001036199.1,GeneID:4807252;Name=YP_001036199.1;Note=GC: 33.98%25%3B Transporter classification TC:2.A.77.1.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.748. Curator(s): J. Alves;gbkey=CDS;gene=cadD2;product=cadmium resistance transporter;protein_id=YP_001036199.1;transl_table=11
NC_009009.1	RefSeq	gene	2291227	2291565	.	+	.	ID=gene2254;Dbxref=GeneID:4807905;Name=cadX;gbkey=Gene;gene=cadX;gene_biotype=protein_coding;locus_tag=SSA_2289
NC_009009.1	RefSeq	CDS	2291227	2291565	.	+	0	ID=cds2179;Parent=gene2254;Dbxref=Genbank:YP_001036200.1,GeneID:4807905;Name=YP_001036200.1;Note=GC: 32.45%25%3B Codon Adaptation Index (CAI): 0.716. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=cadX;product=cadmium efflux system transcriptional regulator (ArsR-like);protein_id=YP_001036200.1;transl_table=11
NC_009009.1	RefSeq	gene	2291588	2293024	.	+	.	ID=gene2255;Dbxref=GeneID:4807959;Name=SSA_2290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2290
NC_009009.1	RefSeq	CDS	2291588	2293024	.	+	0	ID=cds2180;Parent=gene2255;Dbxref=Genbank:YP_001036201.1,GeneID:4807959;Name=YP_001036201.1;Note=GC: 31.52%25%3B Codon Adaptation Index (CAI): 0.749.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036201.1;transl_table=11
NC_009009.1	RefSeq	gene	2293344	2293793	.	+	.	ID=gene2256;Dbxref=GeneID:4807566;Name=SSA_2291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2291
NC_009009.1	RefSeq	CDS	2293344	2293793	.	+	0	ID=cds2181;Parent=gene2256;Dbxref=Genbank:YP_001036202.1,GeneID:4807566;Name=YP_001036202.1;Note=GC: 36.67%25%3B Codon Adaptation Index (CAI): 0.782.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036202.1;transl_table=11
NC_009009.1	RefSeq	gene	2294313	2295413	.	+	.	ID=gene2257;Dbxref=GeneID:4807765;Name=SSA_2292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2292
NC_009009.1	RefSeq	CDS	2294313	2295413	.	+	0	ID=cds2182;Parent=gene2257;Dbxref=Genbank:YP_001036203.1,GeneID:4807765;Name=YP_001036203.1;Note=GC: 40.24%25%3B Codon Adaptation Index (CAI): 0.745. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=DNA segregation ATPase FtsK/SpoIIIE-like protein;protein_id=YP_001036203.1;transl_table=11
NC_009009.1	RefSeq	gene	2295410	2296015	.	+	.	ID=gene2258;Dbxref=GeneID:4807851;Name=SSA_2293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2293
NC_009009.1	RefSeq	CDS	2295410	2296015	.	+	0	ID=cds2183;Parent=gene2258;Dbxref=Genbank:YP_001036204.1,GeneID:4807851;Name=YP_001036204.1;Note=GC: 37.95%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.711. SignalP prediction: Yes (prob. 0.497)%3B Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036204.1;transl_table=11
NC_009009.1	RefSeq	gene	2296222	2296827	.	+	.	ID=gene2259;Dbxref=GeneID:4807410;Name=SSA_2294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2294
NC_009009.1	RefSeq	CDS	2296222	2296827	.	+	0	ID=cds2184;Parent=gene2259;Dbxref=Genbank:YP_001036205.1,GeneID:4807410;Name=YP_001036205.1;Note=GC: 38.45%25%3B Codon Adaptation Index (CAI): 0.745.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036205.1;transl_table=11
NC_009009.1	RefSeq	gene	2297158	2298423	.	+	.	ID=gene2260;Dbxref=GeneID:4807032;Name=SSA_2295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2295
NC_009009.1	RefSeq	CDS	2297158	2298423	.	+	0	ID=cds2185;Parent=gene2260;Dbxref=Genbank:YP_001036206.1,GeneID:4807032;Name=YP_001036206.1;Note=GC: 34.91%25%3B Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves;gbkey=CDS;product=phage integrase family integrase/recombinase;protein_id=YP_001036206.1;transl_table=11
NC_009009.1	RefSeq	gene	2298639	2298863	.	-	.	ID=gene2261;Dbxref=GeneID:4807598;Name=SSA_2296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2296
NC_009009.1	RefSeq	CDS	2298639	2298863	.	-	0	ID=cds2186;Parent=gene2261;Dbxref=Genbank:YP_001036207.1,GeneID:4807598;Name=YP_001036207.1;Note=GC: 45.33%25%3B Codon Adaptation Index (CAI): 0.783. Curator(s): J. Alves;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=YP_001036207.1;transl_table=11
NC_009009.1	RefSeq	gene	2298866	2299462	.	-	.	ID=gene2262;Dbxref=GeneID:4808046;Name=SSA_2297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2297
NC_009009.1	RefSeq	CDS	2298866	2299462	.	-	0	ID=cds2187;Parent=gene2262;Dbxref=Genbank:YP_001036208.1,GeneID:4808046;Name=YP_001036208.1;Note=GC: 39.53%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.778. SignalP prediction: Yes (prob. 0.918).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036208.1;transl_table=11
NC_009009.1	RefSeq	gene	2299659	2300693	.	-	.	ID=gene2263;Dbxref=GeneID:4807094;Name=SSA_2298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2298
NC_009009.1	RefSeq	CDS	2299659	2300693	.	-	0	ID=cds2188;Parent=gene2263;Dbxref=Genbank:YP_001036209.1,GeneID:4807094;Name=YP_001036209.1;Note=GC: 45.31%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves;gbkey=CDS;product=serine protease;protein_id=YP_001036209.1;transl_table=11
NC_009009.1	RefSeq	gene	2300745	2301635	.	-	.	ID=gene2264;Dbxref=GeneID:4806633;Name=SSA_2299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2299
NC_009009.1	RefSeq	CDS	2300745	2301635	.	-	0	ID=cds2189;Parent=gene2264;Dbxref=Genbank:YP_001036210.1,GeneID:4806633;Name=YP_001036210.1;Note=GC: 42.87%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.761.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036210.1;transl_table=11
NC_009009.1	RefSeq	gene	2301684	2302598	.	-	.	ID=gene2265;Dbxref=GeneID:4806357;Name=SSA_2300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2300
NC_009009.1	RefSeq	CDS	2301684	2302598	.	-	0	ID=cds2190;Parent=gene2265;Dbxref=Genbank:YP_001036211.1,GeneID:4806357;Name=YP_001036211.1;Note=GC: 38.25%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.758.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036211.1;transl_table=11
NC_009009.1	RefSeq	gene	2302759	2303358	.	-	.	ID=gene2266;Dbxref=GeneID:4806656;Name=lytB;gbkey=Gene;gene=lytB;gene_biotype=protein_coding;locus_tag=SSA_2301
NC_009009.1	RefSeq	CDS	2302759	2303358	.	-	0	ID=cds2191;Parent=gene2266;Dbxref=Genbank:YP_001036212.1,GeneID:4806656;Name=YP_001036212.1;Note=GC: 45%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.771. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;gene=lytB;product=S-layer protein;protein_id=YP_001036212.1;transl_table=11
NC_009009.1	RefSeq	gene	2303394	2304134	.	-	.	ID=gene2267;Dbxref=GeneID:4806733;Name=SSA_2302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2302
NC_009009.1	RefSeq	CDS	2303394	2304134	.	-	0	ID=cds2192;Parent=gene2267;Dbxref=Genbank:YP_001036213.1,GeneID:4806733;Name=YP_001036213.1;Note=GC: 45.88%25%3B Transporter classification TC:3.A.15.2.1. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.753.;gbkey=CDS;product=Type IV fimbrial biogenesis protein%2C prepilin cysteine protease (C20) PilD;protein_id=YP_001036213.1;transl_table=11
NC_009009.1	RefSeq	gene	2304203	2305267	.	-	.	ID=gene2268;Dbxref=GeneID:4806755;Name=SSA_2303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2303
NC_009009.1	RefSeq	CDS	2304203	2305267	.	-	0	ID=cds2193;Parent=gene2268;Dbxref=Genbank:YP_001036214.1,GeneID:4806755;Name=YP_001036214.1;Note=GC: 43.76%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036214.1;transl_table=11
NC_009009.1	RefSeq	gene	2305275	2306360	.	-	.	ID=gene2269;Dbxref=GeneID:4806297;Name=SSA_2304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2304
NC_009009.1	RefSeq	CDS	2305275	2306360	.	-	0	ID=cds2194;Parent=gene2269;Dbxref=Genbank:YP_001036215.1,GeneID:4806297;Name=YP_001036215.1;Note=GC: 44.2%25%3B Codon Adaptation Index (CAI): 0.817. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036215.1;transl_table=11
NC_009009.1	RefSeq	gene	2306416	2308149	.	-	.	ID=gene2270;Dbxref=GeneID:4805889;Name=SSA_2305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2305
NC_009009.1	RefSeq	CDS	2306416	2308149	.	-	0	ID=cds2195;Parent=gene2270;Dbxref=Genbank:YP_001036216.1,GeneID:4805889;Name=YP_001036216.1;Note=GC: 46.37%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.765.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036216.1;transl_table=11
NC_009009.1	RefSeq	gene	2308413	2309999	.	-	.	ID=gene2271;Dbxref=GeneID:4805926;Name=SSA_2307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2307
NC_009009.1	RefSeq	CDS	2308413	2309999	.	-	0	ID=cds2196;Parent=gene2271;Dbxref=Genbank:YP_001036217.1,GeneID:4805926;Name=YP_001036217.1;Note=GC: 45.49%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.552).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036217.1;transl_table=11
NC_009009.1	RefSeq	gene	2309983	2310564	.	-	.	ID=gene2272;Dbxref=GeneID:4807191;Name=SSA_2308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2308
NC_009009.1	RefSeq	CDS	2309983	2310564	.	-	0	ID=cds2197;Parent=gene2272;Dbxref=Genbank:YP_001036218.1,GeneID:4807191;Name=YP_001036218.1;Note=GC: 41.75%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.753. SignalP prediction: Yes (prob. 0.573).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036218.1;transl_table=11
NC_009009.1	RefSeq	gene	2310564	2311976	.	-	.	ID=gene2273;Dbxref=GeneID:4806561;Name=SSA_2309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2309
NC_009009.1	RefSeq	CDS	2310564	2311976	.	-	0	ID=cds2198;Parent=gene2273;Dbxref=Genbank:YP_001036219.1,GeneID:4806561;Name=YP_001036219.1;Note=GC: 44.23%25%3B Codon Adaptation Index (CAI): 0.795.;gbkey=CDS;product=fimbrial assembly protein;protein_id=YP_001036219.1;transl_table=11
NC_009009.1	RefSeq	gene	2312021	2313508	.	-	.	ID=gene2274;Dbxref=GeneID:4805815;Name=SSA_2310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2310
NC_009009.1	RefSeq	CDS	2312021	2313508	.	-	0	ID=cds2199;Parent=gene2274;Dbxref=Genbank:YP_001036220.1,GeneID:4805815;Name=YP_001036220.1;Note=GC: 39.52%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.771. SignalP prediction: Yes (prob. 0.969)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036220.1;transl_table=11
NC_009009.1	RefSeq	gene	2313521	2314855	.	-	.	ID=gene2275;Dbxref=GeneID:4806603;Name=norD;gbkey=Gene;gene=norD;gene_biotype=protein_coding;locus_tag=SSA_2311
NC_009009.1	RefSeq	CDS	2313521	2314855	.	-	0	ID=cds2200;Parent=gene2275;Dbxref=Genbank:YP_001036221.1,GeneID:4806603;Name=YP_001036221.1;Note=GC: 38.88%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.774. Curator(s): J. Alves;gbkey=CDS;gene=norD;product=fused nitric oxide reductase NorD/von Willebrand factor type A domain-containing protein;protein_id=YP_001036221.1;transl_table=11
NC_009009.1	RefSeq	gene	2314883	2315371	.	-	.	ID=gene2276;Dbxref=GeneID:4806529;Name=SSA_2312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2312
NC_009009.1	RefSeq	CDS	2314883	2315371	.	-	0	ID=cds2201;Parent=gene2276;Dbxref=Genbank:YP_001036222.1,GeneID:4806529;Name=YP_001036222.1;Note=GC: 43.76%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.751. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036222.1;transl_table=11
NC_009009.1	RefSeq	gene	2315495	2315938	.	-	.	ID=gene2277;Dbxref=GeneID:4806332;Name=SSA_2313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2313
NC_009009.1	RefSeq	CDS	2315495	2315938	.	-	0	ID=cds2202;Parent=gene2277;Dbxref=Genbank:YP_001036223.1,GeneID:4806332;Name=YP_001036223.1;Note=GC: 45.95%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036223.1;transl_table=11
NC_009009.1	RefSeq	gene	2315976	2316425	.	-	.	ID=gene2278;Dbxref=GeneID:4806600;Name=SSA_2314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2314
NC_009009.1	RefSeq	CDS	2315976	2316425	.	-	0	ID=cds2203;Parent=gene2278;Dbxref=Genbank:YP_001036224.1,GeneID:4806600;Name=YP_001036224.1;Note=GC: 42.89%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.801. SignalP prediction: Yes (prob. 0.982).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036224.1;transl_table=11
NC_009009.1	RefSeq	gene	2316577	2317035	.	-	.	ID=gene2279;Dbxref=GeneID:4806465;Name=SSA_2315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2315
NC_009009.1	RefSeq	CDS	2316577	2317035	.	-	0	ID=cds2204;Parent=gene2279;Dbxref=Genbank:YP_001036225.1,GeneID:4806465;Name=YP_001036225.1;Note=GC: 41.61%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.803. SignalP prediction: Yes (prob. 0.982)%3B Weakly similar to type IV pilin. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036225.1;transl_table=11
NC_009009.1	RefSeq	gene	2317206	2318432	.	-	.	ID=gene2280;Dbxref=GeneID:4806866;Name=SSA_2316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2316
NC_009009.1	RefSeq	CDS	2317206	2318432	.	-	0	ID=cds2205;Parent=gene2280;Dbxref=Genbank:YP_001036226.1,GeneID:4806866;Name=YP_001036226.1;Note=GC: 48.17%25%3B Transporter classification TC:3.A.15.2.1. Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.744.;gbkey=CDS;product=general secretory pathway protein F;protein_id=YP_001036226.1;transl_table=11
NC_009009.1	RefSeq	gene	2318436	2319500	.	-	.	ID=gene2281;Dbxref=GeneID:4806867;Name=SSA_2317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2317
NC_009009.1	RefSeq	CDS	2318436	2319500	.	-	0	ID=cds2206;Parent=gene2281;Dbxref=Genbank:YP_001036227.1,GeneID:4806867;Name=YP_001036227.1;Note=GC: 50.42%25%3B Transporter classification TC:3.A.15.2.1. Codon Adaptation Index (CAI): 0.737.;gbkey=CDS;product=Tfp pilus assembly protein%2C pilus retraction ATPase PilT;protein_id=YP_001036227.1;transl_table=11
NC_009009.1	RefSeq	gene	2319502	2321184	.	-	.	ID=gene2282;Dbxref=GeneID:4806868;Name=SSA_2318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2318
NC_009009.1	RefSeq	CDS	2319502	2321184	.	-	0	ID=cds2207;Parent=gene2282;Dbxref=Genbank:YP_001036228.1,GeneID:4806868;Name=YP_001036228.1;Note=GC: 45.45%25%3B Transporter classification TC:3.A.15.2.1. Codon Adaptation Index (CAI): 0.755.;gbkey=CDS;product=PilB-like pili biogenesis ATPase;protein_id=YP_001036228.1;transl_table=11
NC_009009.1	RefSeq	gene	2322392	2325886	.	-	.	ID=gene2283;Dbxref=GeneID:4808053;Name=SSA_2320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2320
NC_009009.1	RefSeq	CDS	2322392	2325886	.	-	0	ID=cds2208;Parent=gene2283;Dbxref=Genbank:YP_001036229.1,GeneID:4808053;Name=YP_001036229.1;Note=GC: 39.71%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.766. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036229.1;transl_table=11
NC_009009.1	RefSeq	gene	2326140	2327015	.	-	.	ID=gene2284;Dbxref=GeneID:4808055;Name=czcD;gbkey=Gene;gene=czcD;gene_biotype=protein_coding;locus_tag=SSA_2321
NC_009009.1	RefSeq	CDS	2326140	2327015	.	-	0	ID=cds2209;Parent=gene2284;Dbxref=Genbank:YP_001036230.1,GeneID:4808055;Name=YP_001036230.1;Note=GC: 45.78%25%3B Transporter classification TC:2.A.4.1.3. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.997)%3B Curator(s): J. Alves;gbkey=CDS;gene=czcD;product=cation (Co/Zn/Cd) efflux protein;protein_id=YP_001036230.1;transl_table=11
NC_009009.1	RefSeq	gene	2327184	2327705	.	+	.	ID=gene2285;Dbxref=GeneID:4807665;Name=SSA_2322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2322
NC_009009.1	RefSeq	CDS	2327184	2327705	.	+	0	ID=cds2210;Parent=gene2285;Dbxref=Genbank:YP_001036231.1,GeneID:4807665;Name=YP_001036231.1;Note=GC: 44.06%25%3B Codon Adaptation Index (CAI): 0.789. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;product=TetR/AcrR family transcriptional regulator;protein_id=YP_001036231.1;transl_table=11
NC_009009.1	RefSeq	gene	2327744	2328910	.	+	.	ID=gene2286;Dbxref=GeneID:4806748;Name=SSA_2323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2323
NC_009009.1	RefSeq	CDS	2327744	2328910	.	+	0	ID=cds2211;Parent=gene2286;Dbxref=Genbank:YP_001036232.1,GeneID:4806748;Name=YP_001036232.1;Note=GC: 48.24%25%3B Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.751. SignalP prediction: Yes (prob. 0.983).;gbkey=CDS;product=transporter;protein_id=YP_001036232.1;transl_table=11
NC_009009.1	RefSeq	gene	2328937	2330199	.	-	.	ID=gene2287;Dbxref=GeneID:4807750;Name=SSA_2324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2324
NC_009009.1	RefSeq	CDS	2328937	2330199	.	-	0	ID=cds2212;Parent=gene2287;Dbxref=Genbank:YP_001036233.1,GeneID:4807750;Name=YP_001036233.1;Note=GC: 45.05%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.758.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036233.1;transl_table=11
NC_009009.1	RefSeq	gene	2330203	2330811	.	-	.	ID=gene2288;Dbxref=GeneID:4805823;Name=SSA_2325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2325
NC_009009.1	RefSeq	CDS	2330203	2330811	.	-	0	ID=cds2213;Parent=gene2288;Dbxref=Genbank:YP_001036234.1,GeneID:4805823;Name=YP_001036234.1;Note=GC: 49.92%25%3B Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=YP_001036234.1;transl_table=11
NC_009009.1	RefSeq	gene	2331065	2331460	.	+	.	ID=gene2289;Dbxref=GeneID:4807708;Name=SSA_2327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2327
NC_009009.1	RefSeq	CDS	2331065	2331460	.	+	0	ID=cds2214;Parent=gene2289;Dbxref=Genbank:YP_001036235.1,GeneID:4807708;Name=YP_001036235.1;Note=GC: 41.92%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.823. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036235.1;transl_table=11
NC_009009.1	RefSeq	gene	2331623	2332369	.	+	.	ID=gene2290;Dbxref=GeneID:4808065;Name=fcsR;gbkey=Gene;gene=fcsR;gene_biotype=protein_coding;locus_tag=SSA_2328
NC_009009.1	RefSeq	CDS	2331623	2332369	.	+	0	ID=cds2215;Parent=gene2290;Dbxref=Genbank:YP_001036236.1,GeneID:4808065;Name=YP_001036236.1;Note=GC: 45.78%25%3B Codon Adaptation Index (CAI): 0.756. Helix-turn-helix prediction: AraC. Curator(s): J. Alves;gbkey=CDS;gene=fcsR;product=sugar metabolism transcriptional repressor;protein_id=YP_001036236.1;transl_table=11
NC_009009.1	RefSeq	gene	2332402	2333229	.	+	.	ID=gene2291;Dbxref=GeneID:4806797;Name=SSA_2329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2329
NC_009009.1	RefSeq	CDS	2332402	2333229	.	+	0	ID=cds2216;Parent=gene2291;Dbxref=Genbank:YP_001036237.1,GeneID:4806797;Name=YP_001036237.1;Note=GC: 48.91%25%3B Codon Adaptation Index (CAI): 0.747.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036237.1;transl_table=11
NC_009009.1	RefSeq	gene	2333260	2333745	.	-	.	ID=gene2292;Dbxref=GeneID:4807321;Name=SSA_2330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2330
NC_009009.1	RefSeq	CDS	2333260	2333745	.	-	0	ID=cds2217;Parent=gene2292;Dbxref=Genbank:YP_001036238.1,GeneID:4807321;Name=YP_001036238.1;Note=GC: 50.62%25%3B Codon Adaptation Index (CAI): 0.77.;gbkey=CDS;product=acetyltransferase;protein_id=YP_001036238.1;transl_table=11
NC_009009.1	RefSeq	gene	2333786	2335054	.	-	.	ID=gene2293;Dbxref=GeneID:4807823;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=SSA_2331
NC_009009.1	RefSeq	CDS	2333786	2335054	.	-	0	ID=cds2218;Parent=gene2293;Dbxref=Genbank:YP_001036239.1,GeneID:4807823;Name=YP_001036239.1;Note=GC: 47.83%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.775. SignalP prediction: Yes (prob. 0.453)%3B Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid.;gbkey=CDS;gene=dltD;product=D-alanine transfer protein;protein_id=YP_001036239.1;transl_table=11
NC_009009.1	RefSeq	gene	2335047	2335286	.	-	.	ID=gene2294;Dbxref=GeneID:4806927;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=SSA_2332
NC_009009.1	RefSeq	CDS	2335047	2335286	.	-	0	ID=cds2219;Parent=gene2294;Dbxref=Genbank:YP_001036240.1,GeneID:4806927;Name=YP_001036240.1;Note=D-alanyl carrier protein subunit%3B involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid%3B D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid;gbkey=CDS;gene=dltC;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=YP_001036240.1;transl_table=11
NC_009009.1	RefSeq	gene	2335306	2336550	.	-	.	ID=gene2295;Dbxref=GeneID:4807219;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=SSA_2333
NC_009009.1	RefSeq	CDS	2335306	2336550	.	-	0	ID=cds2220;Parent=gene2295;Dbxref=Genbank:YP_001036241.1,GeneID:4807219;Name=YP_001036241.1;Note=GC: 45.46%25%3B Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.778.;gbkey=CDS;gene=dltB;product=hypothetical protein;protein_id=YP_001036241.1;transl_table=11
NC_009009.1	RefSeq	gene	2336547	2338097	.	-	.	ID=gene2296;Dbxref=GeneID:4807180;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=SSA_2334
NC_009009.1	RefSeq	CDS	2336547	2338097	.	-	0	ID=cds2221;Parent=gene2296;Dbxref=Genbank:YP_001036242.1,GeneID:4807180;Name=YP_001036242.1;Note=transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid;gbkey=CDS;gene=dltA;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=YP_001036242.1;transl_table=11
NC_009009.1	RefSeq	gene	2338117	2338248	.	-	.	ID=gene2297;Dbxref=GeneID:4807272;Name=dltX;gbkey=Gene;gene=dltX;gene_biotype=protein_coding;locus_tag=SSA_2335
NC_009009.1	RefSeq	CDS	2338117	2338248	.	-	0	ID=cds2222;Parent=gene2297;Dbxref=Genbank:YP_001036243.1,GeneID:4807272;Name=YP_001036243.1;Note=GC: 33.33%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.843. Curator(s): J. Alves;gbkey=CDS;gene=dltX;product=D-Ala-teichoic acid biosynthesis protein;protein_id=YP_001036243.1;transl_table=11
NC_009009.1	RefSeq	gene	2338507	2338845	.	+	.	ID=gene2298;Dbxref=GeneID:4807139;Name=SSA_2336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2336
NC_009009.1	RefSeq	CDS	2338507	2338845	.	+	0	ID=cds2223;Parent=gene2298;Dbxref=Genbank:YP_001036244.1,GeneID:4807139;Name=YP_001036244.1;Note=GC: 42.77%25%3B Codon Adaptation Index (CAI): 0.703. Curator(s): J. Alves;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=YP_001036244.1;transl_table=11
NC_009009.1	RefSeq	gene	2338820	2339419	.	+	.	ID=gene2299;Dbxref=GeneID:4806873;Name=SSA_2337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2337
NC_009009.1	RefSeq	CDS	2338820	2339419	.	+	0	ID=cds2224;Parent=gene2299;Dbxref=Genbank:YP_001036245.1,GeneID:4806873;Name=YP_001036245.1;Note=GC: 46.17%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.725.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036245.1;transl_table=11
NC_009009.1	RefSeq	gene	2339412	2340452	.	+	.	ID=gene2300;Dbxref=GeneID:4806939;Name=SSA_2338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2338
NC_009009.1	RefSeq	CDS	2339412	2340452	.	+	0	ID=cds2225;Parent=gene2300;Dbxref=Genbank:YP_001036246.1,GeneID:4806939;Name=YP_001036246.1;Note=GC: 44.67%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.741. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1)%3B Partially similar to immunoglobulin A1 protease. Curator(s): J. Alves;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036246.1;transl_table=11
NC_009009.1	RefSeq	gene	2340596	2341549	.	+	.	ID=gene2301;Dbxref=GeneID:4807080;Name=SSA_2339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2339
NC_009009.1	RefSeq	CDS	2340596	2341549	.	+	0	ID=cds2226;Parent=gene2301;Dbxref=Genbank:YP_001036247.1,GeneID:4807080;Name=YP_001036247.1;Note=GC: 48.64%25%3B Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=microcin C7 resistance protein;protein_id=YP_001036247.1;transl_table=11
NC_009009.1	RefSeq	gene	2341629	2342933	.	-	.	ID=gene2302;Dbxref=GeneID:4807037;Name=SSA_2340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2340
NC_009009.1	RefSeq	CDS	2341629	2342933	.	-	0	ID=cds2227;Parent=gene2302;Dbxref=Genbank:YP_001036248.1,GeneID:4807037;Name=YP_001036248.1;Note=GC: 46.21%25%3B Codon Adaptation Index (CAI): 0.775. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036248.1;transl_table=11
NC_009009.1	RefSeq	gene	2342890	2343603	.	-	.	ID=gene2303;Dbxref=GeneID:4807628;Name=SSA_2342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2342
NC_009009.1	RefSeq	CDS	2342890	2343603	.	-	0	ID=cds2228;Parent=gene2303;Dbxref=Genbank:YP_001036249.1,GeneID:4807628;Name=YP_001036249.1;Note=GC: 44.54%25%3B Codon Adaptation Index (CAI): 0.786. Possibly involved in polyphosphate accumulation.;gbkey=CDS;product=SPX domain-containing protein;protein_id=YP_001036249.1;transl_table=11
NC_009009.1	RefSeq	gene	2343793	2346216	.	-	.	ID=gene2304;Dbxref=GeneID:4807914;Name=SSA_2343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2343
NC_009009.1	RefSeq	CDS	2343793	2346216	.	-	0	ID=cds2229;Parent=gene2304;Dbxref=Genbank:YP_001036250.1,GeneID:4807914;Name=YP_001036250.1;Note=GC: 44.27%25%3B Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.755.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036250.1;transl_table=11
NC_009009.1	RefSeq	gene	2346677	2346826	.	+	.	ID=gene2305;Dbxref=GeneID:4807775;Name=SSA_2344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2344
NC_009009.1	RefSeq	CDS	2346677	2346826	.	+	0	ID=cds2230;Parent=gene2305;Dbxref=Genbank:YP_001036251.1,GeneID:4807775;Name=YP_001036251.1;Note=GC: 37.33%25%3B Codon Adaptation Index (CAI): 0.751.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036251.1;transl_table=11
NC_009009.1	RefSeq	gene	2347059	2347562	.	+	.	ID=gene2306;Dbxref=GeneID:4807662;Name=SSA_2345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2345
NC_009009.1	RefSeq	CDS	2347059	2347562	.	+	0	ID=cds2231;Parent=gene2306;Dbxref=Genbank:YP_001036252.1,GeneID:4807662;Name=YP_001036252.1;Note=GC: 41.67%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.787. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036252.1;transl_table=11
NC_009009.1	RefSeq	gene	2347692	2348636	.	-	.	ID=gene2307;Dbxref=GeneID:4807855;Name=SSA_2346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2346
NC_009009.1	RefSeq	CDS	2347692	2348636	.	-	0	ID=cds2232;Parent=gene2307;Dbxref=Genbank:YP_001036253.1,GeneID:4807855;Name=YP_001036253.1;Note=GC: 45.61%25%3B Codon Adaptation Index (CAI): 0.767.;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_001036253.1;transl_table=11
NC_009009.1	RefSeq	gene	2348737	2350029	.	-	.	ID=gene2308;Dbxref=GeneID:4807745;Name=SSA_2347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2347
NC_009009.1	RefSeq	CDS	2348737	2350029	.	-	0	ID=cds2233;Parent=gene2308;Dbxref=Genbank:YP_001036254.1,GeneID:4807745;Name=YP_001036254.1;Note=GC: 45.48%25%3B Codon Adaptation Index (CAI): 0.764.;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=YP_001036254.1;transl_table=11
NC_009009.1	RefSeq	gene	2349965	2350810	.	-	.	ID=gene2309;Dbxref=GeneID:4807660;Name=SSA_2348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2348
NC_009009.1	RefSeq	CDS	2349965	2350810	.	-	0	ID=cds2234;Parent=gene2309;Dbxref=Genbank:YP_001036255.1,GeneID:4807660;Name=YP_001036255.1;Note=GC: 45.63%25%3B Codon Adaptation Index (CAI): 0.79.;gbkey=CDS;product=metal dependent hydrolase;protein_id=YP_001036255.1;transl_table=11
NC_009009.1	RefSeq	gene	2350767	2351798	.	-	.	ID=gene2310;Dbxref=GeneID:4807950;Name=galE1;gbkey=Gene;gene=galE1;gene_biotype=protein_coding;locus_tag=SSA_2349
NC_009009.1	RefSeq	CDS	2350767	2351798	.	-	0	ID=cds2235;Parent=gene2310;Dbxref=Genbank:YP_001036256.1,GeneID:4807950;Name=YP_001036256.1;Note=GC: 43.99%25%3B Codon Adaptation Index (CAI): 0.795.;gbkey=CDS;gene=galE1;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=YP_001036256.1;transl_table=11
NC_009009.1	RefSeq	gene	2352001	2352738	.	-	.	ID=gene2311;Dbxref=GeneID:4807067;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=SSA_2350
NC_009009.1	RefSeq	CDS	2352001	2352738	.	-	0	ID=cds2236;Parent=gene2311;Dbxref=Genbank:YP_001036257.1,GeneID:4807067;Name=YP_001036257.1;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=YP_001036257.1;transl_table=11
NC_009009.1	RefSeq	gene	2352875	2353597	.	-	.	ID=gene2312;Dbxref=GeneID:4807456;Name=SSA_2351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2351
NC_009009.1	RefSeq	CDS	2352875	2353597	.	-	0	ID=cds2237;Parent=gene2312;Dbxref=Genbank:YP_001036258.1,GeneID:4807456;Name=YP_001036258.1;Note=GC: 48.13%25%3B Transporter classification TC:3.A.1.16.1. Codon Adaptation Index (CAI): 0.744. Curator(s): J. Alves;gbkey=CDS;product=nitrate/sulfonate/bicarbonate ABC transporter ATPase;protein_id=YP_001036258.1;transl_table=11
NC_009009.1	RefSeq	gene	2353597	2354598	.	-	.	ID=gene2313;Dbxref=GeneID:4807974;Name=SSA_2352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2352
NC_009009.1	RefSeq	CDS	2353597	2354598	.	-	0	ID=cds2238;Parent=gene2313;Dbxref=Genbank:YP_001036259.1,GeneID:4807974;Name=YP_001036259.1;Note=GC: 42.81%25%3B Codon Adaptation Index (CAI): 0.804. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1)%3B Curator(s): J. Alves;gbkey=CDS;product=nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein;protein_id=YP_001036259.1;transl_table=11
NC_009009.1	RefSeq	gene	2354640	2355392	.	-	.	ID=gene2314;Dbxref=GeneID:4807563;Name=SSA_2353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2353
NC_009009.1	RefSeq	CDS	2354640	2355392	.	-	0	ID=cds2239;Parent=gene2314;Dbxref=Genbank:YP_001036260.1,GeneID:4807563;Name=YP_001036260.1;Note=GC: 46.75%25%3B Transporter classification TC:3.A.1.17.1. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.764. Curator(s): J. Alves;gbkey=CDS;product=nitrate/sulfonate/bicarbonate ABC transporter permease;protein_id=YP_001036260.1;transl_table=11
NC_009009.1	RefSeq	gene	2355695	2356327	.	-	.	ID=gene2315;Dbxref=GeneID:4807448;Name=SSA_2354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2354
NC_009009.1	RefSeq	CDS	2355695	2356327	.	-	0	ID=cds2240;Parent=gene2315;Dbxref=Genbank:YP_001036261.1,GeneID:4807448;Name=YP_001036261.1;Note=GC: 40.28%25%3B Codon Adaptation Index (CAI): 0.812.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036261.1;transl_table=11
NC_009009.1	RefSeq	gene	2356415	2356690	.	-	.	ID=gene2316;Dbxref=GeneID:4807859;Name=SSA_2355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2355
NC_009009.1	RefSeq	CDS	2356415	2356690	.	-	0	ID=cds2241;Parent=gene2316;Dbxref=Genbank:YP_001036262.1,GeneID:4807859;Name=YP_001036262.1;Note=GC: 40.58%25%3B Codon Adaptation Index (CAI): 0.816.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036262.1;transl_table=11
NC_009009.1	RefSeq	gene	2356693	2358048	.	-	.	ID=gene2317;Dbxref=GeneID:4807200;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=SSA_2356
NC_009009.1	RefSeq	CDS	2356693	2358048	.	-	0	ID=cds2242;Parent=gene2317;Dbxref=Genbank:YP_001036263.1,GeneID:4807200;Name=YP_001036263.1;Note=unwinds double stranded DNA;gbkey=CDS;gene=dnaC;product=replicative DNA helicase;protein_id=YP_001036263.1;transl_table=11
NC_009009.1	RefSeq	gene	2358075	2358527	.	-	.	ID=gene2318;Dbxref=GeneID:4806744;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SSA_2357
NC_009009.1	RefSeq	CDS	2358075	2358527	.	-	0	ID=cds2243;Parent=gene2318;Dbxref=Genbank:YP_001036264.1,GeneID:4806744;Name=YP_001036264.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=YP_001036264.1;transl_table=11
NC_009009.1	RefSeq	gene	2358524	2360587	.	-	.	ID=gene2319;Dbxref=GeneID:4806732;Name=SSA_2358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2358
NC_009009.1	RefSeq	CDS	2358524	2360587	.	-	0	ID=cds2244;Parent=gene2319;Dbxref=Genbank:YP_001036265.1,GeneID:4806732;Name=YP_001036265.1;Note=GC: 43.02%25%3B Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 0.907).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036265.1;transl_table=11
NC_009009.1	RefSeq	gene	2360703	2362610	.	-	.	ID=gene2320;Dbxref=GeneID:4806401;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=SSA_2359
NC_009009.1	RefSeq	CDS	2360703	2362610	.	-	0	ID=cds2245;Parent=gene2320;Dbxref=Genbank:YP_001036266.1,GeneID:4806401;Name=YP_001036266.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification protein GidA;protein_id=YP_001036266.1;transl_table=11
NC_009009.1	RefSeq	gene	2362748	2363869	.	-	.	ID=gene2321;Dbxref=GeneID:4806490;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=SSA_2360
NC_009009.1	RefSeq	CDS	2362748	2363869	.	-	0	ID=cds2246;Parent=gene2321;Dbxref=Genbank:YP_001036267.1,GeneID:4806490;Name=YP_001036267.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=YP_001036267.1;transl_table=11
NC_009009.1	RefSeq	gene	2364168	2364839	.	+	.	ID=gene2322;Dbxref=GeneID:4806698;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=SSA_2361
NC_009009.1	RefSeq	CDS	2364168	2364839	.	+	0	ID=cds2247;Parent=gene2322;Dbxref=Genbank:YP_001036268.1,GeneID:4806698;Name=YP_001036268.1;Note=GC: 41.96%25%3B Codon Adaptation Index (CAI): 0.788.;gbkey=CDS;gene=sdaB;product=L-serine dehydratase beta subunit;protein_id=YP_001036268.1;transl_table=11
NC_009009.1	RefSeq	gene	2364848	2365720	.	+	.	ID=gene2323;Dbxref=GeneID:4806448;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=SSA_2362
NC_009009.1	RefSeq	CDS	2364848	2365720	.	+	0	ID=cds2248;Parent=gene2323;Dbxref=Genbank:YP_001036269.1,GeneID:4806448;Name=YP_001036269.1;Note=GC: 45.7%25%3B Codon Adaptation Index (CAI): 0.81.;gbkey=CDS;gene=sdaA;product=L-serine dehydratase alpha subunit;protein_id=YP_001036269.1;transl_table=11
NC_009009.1	RefSeq	gene	2365772	2366419	.	+	.	ID=gene2324;Dbxref=GeneID:4806345;Name=SSA_2363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2363
NC_009009.1	RefSeq	CDS	2365772	2366419	.	+	0	ID=cds2249;Parent=gene2324;Dbxref=Genbank:YP_001036270.1,GeneID:4806345;Name=YP_001036270.1;Note=GC: 38.73%25%3B Codon Adaptation Index (CAI): 0.756. Helix-turn-helix prediction: AraC.;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=YP_001036270.1;transl_table=11
NC_009009.1	RefSeq	gene	2366532	2367122	.	-	.	ID=gene2325;Dbxref=GeneID:4806354;Name=SSA_2364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2364
NC_009009.1	RefSeq	CDS	2366532	2367122	.	-	0	ID=cds2250;Parent=gene2325;Dbxref=Genbank:YP_001036271.1,GeneID:4806354;Name=YP_001036271.1;Note=GC: 42.81%25%3B Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036271.1;transl_table=11
NC_009009.1	RefSeq	gene	2367333	2368127	.	-	.	ID=gene2326;Dbxref=GeneID:4805801;Name=SSA_2365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2365
NC_009009.1	RefSeq	CDS	2367333	2368127	.	-	0	ID=cds2251;Parent=gene2326;Dbxref=Genbank:YP_001036272.1,GeneID:4805801;Name=YP_001036272.1;Note=GC: 41.13%25%3B Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.774.;gbkey=CDS;product=cobalt transport protein cbiQ;protein_id=YP_001036272.1;transl_table=11
NC_009009.1	RefSeq	gene	2368120	2368959	.	-	.	ID=gene2327;Dbxref=GeneID:4806298;Name=cbiO;gbkey=Gene;gene=cbiO;gene_biotype=protein_coding;locus_tag=SSA_2366
NC_009009.1	RefSeq	CDS	2368120	2368959	.	-	0	ID=cds2252;Parent=gene2327;Dbxref=Genbank:YP_001036273.1,GeneID:4806298;Name=YP_001036273.1;Note=with CbiNQ forms the ABC transporter for cobalt import%3B Streptococcus has two adjacent copies of this gene;gbkey=CDS;gene=cbiO;product=cobalt transporter ATP-binding subunit;protein_id=YP_001036273.1;transl_table=11
NC_009009.1	RefSeq	gene	2368935	2369822	.	-	.	ID=gene2328;Dbxref=GeneID:4806249;Name=cbiO;gbkey=Gene;gene=cbiO;gene_biotype=protein_coding;locus_tag=SSA_2367
NC_009009.1	RefSeq	CDS	2368935	2369822	.	-	0	ID=cds2253;Parent=gene2328;Dbxref=Genbank:YP_001036274.1,GeneID:4806249;Name=YP_001036274.1;Note=with CbiNQ forms the ABC transporter for cobalt import%3B Streptococcus has two adjacent copies of this gene;gbkey=CDS;gene=cbiO;product=cobalt transporter ATP-binding subunit;protein_id=YP_001036274.1;transl_table=11
NC_009009.1	RefSeq	gene	2369773	2370312	.	-	.	ID=gene2329;Dbxref=GeneID:4806491;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=SSA_2368
NC_009009.1	RefSeq	CDS	2369773	2370312	.	-	0	ID=cds2254;Parent=gene2329;Dbxref=Genbank:YP_001036275.1,GeneID:4806491;Name=YP_001036275.1;Note=GC: 37.41%25%3B Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.554).;gbkey=CDS;gene=pgsA;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=YP_001036275.1;transl_table=11
NC_009009.1	RefSeq	gene	2370329	2371183	.	-	.	ID=gene2330;Dbxref=GeneID:4806984;Name=SSA_2369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2369
NC_009009.1	RefSeq	CDS	2370329	2371183	.	-	0	ID=cds2255;Parent=gene2330;Dbxref=Genbank:YP_001036276.1,GeneID:4806984;Name=YP_001036276.1;Note=GC: 41.64%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.759.;gbkey=CDS;product=hypothetical protein;protein_id=YP_001036276.1;transl_table=11
NC_009009.1	RefSeq	gene	2371217	2372512	.	-	.	ID=gene2331;Dbxref=GeneID:4807533;Name=SSA_2370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2370
NC_009009.1	RefSeq	CDS	2371217	2372512	.	-	0	ID=cds2256;Parent=gene2331;Dbxref=Genbank:YP_001036277.1,GeneID:4807533;Name=YP_001036277.1;Note=GC: 39.04%25%3B Codon Adaptation Index (CAI): 0.807. Curator(s): J. Alves;gbkey=CDS;product=zinc-dependent peptidase;protein_id=YP_001036277.1;transl_table=11
NC_009009.1	RefSeq	gene	2372512	2373771	.	-	.	ID=gene2332;Dbxref=GeneID:4807917;Name=SSA_2371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2371
NC_009009.1	RefSeq	CDS	2372512	2373771	.	-	0	ID=cds2257;Parent=gene2332;Dbxref=Genbank:YP_001036278.1,GeneID:4807917;Name=YP_001036278.1;Note=GC: 38.25%25%3B Codon Adaptation Index (CAI): 0.816. Curator(s): J. Alves;gbkey=CDS;product=Zn-dependent peptidase;protein_id=YP_001036278.1;transl_table=11
NC_009009.1	RefSeq	gene	2373947	2374345	.	+	.	ID=gene2333;Dbxref=GeneID:4808088;Name=SSA_2372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2372
NC_009009.1	RefSeq	CDS	2373947	2374345	.	+	0	ID=cds2258;Parent=gene2333;Dbxref=Genbank:YP_001036279.1,GeneID:4808088;Name=YP_001036279.1;Note=GC: 37.59%25%3B Codon Adaptation Index (CAI): 0.798. Curator(s): J. Alves%3B (possible S4-like RNA-binding protein);gbkey=CDS;product=hypothetical protein;protein_id=YP_001036279.1;transl_table=11
NC_009009.1	RefSeq	gene	2374348	2375442	.	+	.	ID=gene2334;Dbxref=GeneID:4807841;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SSA_2373
NC_009009.1	RefSeq	CDS	2374348	2375442	.	+	0	ID=cds2259;Parent=gene2334;Dbxref=Genbank:YP_001036280.1,GeneID:4807841;Name=YP_001036280.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=recombination protein F;protein_id=YP_001036280.1;transl_table=11
NC_009009.1	RefSeq	gene	2375624	2377105	.	-	.	ID=gene2335;Dbxref=GeneID:4806737;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=SSA_2374
NC_009009.1	RefSeq	CDS	2375624	2377105	.	-	0	ID=cds2260;Parent=gene2335;Dbxref=Genbank:YP_001036281.1,GeneID:4806737;Name=YP_001036281.1;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate;gbkey=CDS;gene=guaB;product=inosine 5'-monophosphate dehydrogenase;protein_id=YP_001036281.1;transl_table=11
NC_009009.1	RefSeq	gene	2377311	2378336	.	-	.	ID=gene2336;Dbxref=GeneID:4806701;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=SSA_2375
NC_009009.1	RefSeq	CDS	2377311	2378336	.	-	0	ID=cds2261;Parent=gene2336;Dbxref=Genbank:YP_001036282.1,GeneID:4806701;Name=YP_001036282.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=trpS;product=tryptophanyl-tRNA synthetase II;protein_id=YP_001036282.1;transl_table=11
NC_009009.1	RefSeq	gene	2378884	2380248	.	+	.	ID=gene2337;Dbxref=GeneID:4806675;Name=SSA_2376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2376
NC_009009.1	RefSeq	CDS	2378884	2380248	.	+	0	ID=cds2262;Parent=gene2337;Dbxref=Genbank:YP_001036283.1,GeneID:4806675;Name=YP_001036283.1;Note=GC: 39.41%25%3B Transporter classification TC:3.A.1.121.2. Codon Adaptation Index (CAI): 0.805. Curator(s): J. Alves;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_001036283.1;transl_table=11
NC_009009.1	RefSeq	gene	2380324	2382909	.	+	.	ID=gene2338;Dbxref=GeneID:4806470;Name=SSA_2377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2377
NC_009009.1	RefSeq	CDS	2380324	2382909	.	+	0	ID=cds2263;Parent=gene2338;Dbxref=Genbank:YP_001036284.1,GeneID:4806470;Name=YP_001036284.1;Note=GC: 33.33%25%3B Transmembrane domains: 14. Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=copper ABC transporter permease;protein_id=YP_001036284.1;transl_table=11
NC_009009.1	RefSeq	gene	2383020	2383096	.	-	.	ID=gene2339;Dbxref=GeneID:4807337;Name=SSA_2450;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2450
NC_009009.1	RefSeq	tRNA	2383020	2383096	.	-	.	ID=rna71;Parent=gene2339;Dbxref=GeneID:4807337;Note=tRNA-Asn_2;gbkey=tRNA;product=tRNA-Asn
NC_009009.1	RefSeq	exon	2383020	2383096	.	-	.	ID=id72;Parent=rna71;Dbxref=GeneID:4807337;Note=tRNA-Asn_2;gbkey=tRNA;product=tRNA-Asn
NC_009009.1	RefSeq	gene	2383102	2383173	.	-	.	ID=gene2340;Dbxref=GeneID:4807866;Name=SSA_2449;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2449
NC_009009.1	RefSeq	tRNA	2383102	2383173	.	-	.	ID=rna72;Parent=gene2340;Dbxref=GeneID:4807866;Note=tRNA-Glu_3;gbkey=tRNA;product=tRNA-Glu
NC_009009.1	RefSeq	exon	2383102	2383173	.	-	.	ID=id73;Parent=rna72;Dbxref=GeneID:4807866;Note=tRNA-Glu_3;gbkey=tRNA;product=tRNA-Glu
NC_009009.1	RefSeq	gene	2383219	2383983	.	-	.	ID=gene2341;Dbxref=GeneID:4806740;Name=comE;gbkey=Gene;gene=comE;gene_biotype=protein_coding;locus_tag=SSA_2378
NC_009009.1	RefSeq	CDS	2383219	2383983	.	-	0	ID=cds2264;Parent=gene2341;Dbxref=Genbank:YP_001036285.1,GeneID:4806740;Name=YP_001036285.1;Note=GC: 31.9%25%3B Codon Adaptation Index (CAI): 0.807. Curator(s): J. Alves;gbkey=CDS;gene=comE;product=two-component system LytR/AlgR family transcriptional regulator;protein_id=YP_001036285.1;transl_table=11
NC_009009.1	RefSeq	gene	2383989	2385323	.	-	.	ID=gene2342;Dbxref=GeneID:4807897;Name=comD;gbkey=Gene;gene=comD;gene_biotype=protein_coding;locus_tag=SSA_2379
NC_009009.1	RefSeq	CDS	2383989	2385323	.	-	0	ID=cds2265;Parent=gene2342;Dbxref=Genbank:YP_001036286.1,GeneID:4807897;Name=YP_001036286.1;Note=GC: 31.99%25%3B Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.797. Curator(s): J. Alves;gbkey=CDS;gene=comD;product=signal transduction protein;protein_id=YP_001036286.1;transl_table=11
NC_009009.1	RefSeq	gene	2385351	2385458	.	-	.	ID=gene2343;Dbxref=GeneID:4807245;Name=comC;gbkey=Gene;gene=comC;gene_biotype=protein_coding;locus_tag=SSA_2394
NC_009009.1	RefSeq	CDS	2385351	2385458	.	-	0	ID=cds2266;Parent=gene2343;Dbxref=Genbank:YP_001036287.1,GeneID:4807245;Name=YP_001036287.1;Note=GC: 31.48%25%3B Codon Adaptation Index (CAI): ND. Curator(s): T. Kitten;gbkey=CDS;gene=comC;product=competence stimulating peptide;protein_id=YP_001036287.1;transl_table=11
NC_009009.1	RefSeq	gene	2385639	2385712	.	-	.	ID=gene2344;Dbxref=GeneID:4806052;Name=SSA_2448;gbkey=Gene;gene_biotype=tRNA;locus_tag=SSA_2448
NC_009009.1	RefSeq	tRNA	2385639	2385712	.	-	.	ID=rna73;Parent=gene2344;Dbxref=GeneID:4806052;Note=tRNA-Arg_2;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	exon	2385639	2385712	.	-	.	ID=id74;Parent=rna73;Dbxref=GeneID:4806052;Note=tRNA-Arg_2;gbkey=tRNA;product=tRNA-Arg
NC_009009.1	RefSeq	gene	2385755	2386234	.	-	.	ID=gene2345;Dbxref=GeneID:4806404;Name=SSA_2380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2380
NC_009009.1	RefSeq	CDS	2385755	2386234	.	-	0	ID=cds2267;Parent=gene2345;Dbxref=Genbank:YP_001036288.1,GeneID:4806404;Name=YP_001036288.1;Note=SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;gbkey=CDS;product=rRNA large subunit methyltransferase;protein_id=YP_001036288.1;transl_table=11
NC_009009.1	RefSeq	gene	2386438	2387610	.	+	.	ID=gene2346;Dbxref=GeneID:4807817;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=SSA_2381
NC_009009.1	RefSeq	CDS	2386438	2387610	.	+	0	ID=cds2268;Parent=gene2346;Dbxref=Genbank:YP_001036289.1,GeneID:4807817;Name=YP_001036289.1;Note=GC: 36.32%25%3B Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.806. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.974).;gbkey=CDS;gene=htrA;product=DegP protein;protein_id=YP_001036289.1;transl_table=11
NC_009009.1	RefSeq	gene	2387656	2388435	.	+	.	ID=gene2347;Dbxref=GeneID:4805813;Name=SSA_2382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SSA_2382
NC_009009.1	RefSeq	CDS	2387656	2388435	.	+	0	ID=cds2269;Parent=gene2347;Dbxref=Genbank:YP_001036290.1,GeneID:4805813;Name=YP_001036290.1;Note=GC: 34.49%25%3B Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=YP_001036290.1;transl_table=11
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