ATM98_RS00005	SM00981	ATM98_RS00005
ATM98_RS00020	SM00322	K homology RNA-binding domain
ATM98_RS00020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATM98_RS00025	SM00072	Guanylate kinase homologues.
ATM98_RS00030	SM01409	ATM98_RS00030
ATM98_RS00035	SM00487	DEAD-like helicases superfamily
ATM98_RS00035	SM00490	helicase superfamily c-terminal domain
ATM98_RS00050	SM00331	Sigma factor PP2C-like phosphatases
ATM98_RS00050	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
ATM98_RS00055	SM00220	Serine/Threonine protein kinases, catalytic domain
ATM98_RS00055	SM00740	ATM98_RS00055
ATM98_RS00065	SM00387	Histidine kinase-like ATPases
ATM98_RS00070	SM00421	helix_turn_helix, Lux Regulon
ATM98_RS00070	SM00448	cheY-homologous receiver domain
ATM98_RS00080	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS00095	SM00487	DEAD-like helicases superfamily
ATM98_RS00095	SM00490	helicase superfamily c-terminal domain
ATM98_RS00280	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS00320	SM00342	helix_turn_helix, arabinose operon control protein
ATM98_RS00320	SM00448	cheY-homologous receiver domain
ATM98_RS00325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATM98_RS00325	SM00387	Histidine kinase-like ATPases
ATM98_RS00365	SM00450	Rhodanese Homology Domain
ATM98_RS00375	SM00838	Elongation factor G C-terminus
ATM98_RS00400	SM00842	Cell division protein FtsA
ATM98_RS00405	SM00864	Tubulin/FtsZ family, GTPase domain
ATM98_RS00405	SM00865	Tubulin/FtsZ family, C-terminal domain
ATM98_RS00425	SM00363	S4 RNA-binding domain
ATM98_RS00450	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS00450	SM01086	C-terminal, D2-small domain, of ClpB protein
ATM98_RS00510	SM00411	bacterial (prokaryotic) histone like domain
ATM98_RS00520	SM00855	Phosphoglycerate mutase family
ATM98_RS00530	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS00550	SM00448	cheY-homologous receiver domain
ATM98_RS00550	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS00555	SM00387	Histidine kinase-like ATPases
ATM98_RS00560	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS00580	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS00635	SM00860	SMI1 / KNR4 family
ATM98_RS00765	SM01022	ATM98_RS00765
ATM98_RS00790	SM00478	endonuclease III
ATM98_RS00795	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS00815	SM00493	ATM98_RS00815
ATM98_RS00870	SM00487	DEAD-like helicases superfamily
ATM98_RS00870	SM00490	helicase superfamily c-terminal domain
ATM98_RS00875	SM00420	helix_turn_helix, Deoxyribose operon repressor
ATM98_RS00875	SM01134	ATM98_RS00875
ATM98_RS00915	SM01133	ATM98_RS00915
ATM98_RS00940	SM00563	Phosphate acyltransferases
ATM98_RS00945	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ATM98_RS00950	SM00849	Metallo-beta-lactamase superfamily
ATM98_RS00980	SM00100	Cyclic nucleotide-monophosphate binding domain
ATM98_RS00980	SM00419	helix_turn_helix, cAMP Regulatory protein
ATM98_RS01075	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ATM98_RS01110	SM00642	Alpha-amylase domain
ATM98_RS01130	SM01208	ATM98_RS01130
ATM98_RS01165	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01190	SM00892	DNA/RNA non-specific endonuclease
ATM98_RS01205	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01215	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS01315	SM00400	zinc finger
ATM98_RS01315	SM00493	ATM98_RS01315
ATM98_RS01330	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01350	SM00481	DNA polymerase alpha chain like domain
ATM98_RS01395	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01420	SM00904	Riboflavin kinase
ATM98_RS01460	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01465	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01490	SM00448	cheY-homologous receiver domain
ATM98_RS01490	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS01495	SM00387	Histidine kinase-like ATPases
ATM98_RS01495	SM00388	His Kinase A (phosphoacceptor) domain
ATM98_RS01510	SM00487	DEAD-like helicases superfamily
ATM98_RS01510	SM00490	helicase superfamily c-terminal domain
ATM98_RS01540	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01555	SM00354	helix_turn _helix lactose operon repressor
ATM98_RS01590	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01615	SM00829	Enoylreductase
ATM98_RS01645	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01810	SM00981	ATM98_RS01810
ATM98_RS01840	SM00363	S4 RNA-binding domain
ATM98_RS01845	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ATM98_RS01860	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS01865	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATM98_RS01895	SM00465	GIY-YIG type nucleases (URI domain)
ATM98_RS01920	SM00986	Uracil DNA glycosylase superfamily
ATM98_RS01920	SM00987	UreE urease accessory protein, C-terminal domain 
ATM98_RS01930	SM00450	Rhodanese Homology Domain
ATM98_RS01970	SM00830	Chorismate mutase type II
ATM98_RS02080	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
ATM98_RS02100	SM00986	Uracil DNA glycosylase superfamily
ATM98_RS02100	SM00987	UreE urease accessory protein, C-terminal domain 
ATM98_RS02125	SM00917	LeuA allosteric (dimerisation) domain
ATM98_RS02130	SM01329	ATM98_RS02130
ATM98_RS02165	SM01207	ATM98_RS02165
ATM98_RS02170	SM00387	Histidine kinase-like ATPases
ATM98_RS02170	SM00433	TopoisomeraseII
ATM98_RS02190	SM00434	DNA Topoisomerase IV
ATM98_RS02215	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS02235	SM00434	DNA Topoisomerase IV
ATM98_RS02255	SM00881	CoA binding domain
ATM98_RS02275	SM01400	ATM98_RS02275
ATM98_RS02280	SM01118	ATM98_RS02280
ATM98_RS02285	SM00954	Region found in RelA / SpoT proteins
ATM98_RS02305	SM00478	endonuclease III
ATM98_RS02355	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ATM98_RS02360	SM01130	ATM98_RS02360
ATM98_RS02390	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ATM98_RS02390	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ATM98_RS02390	SM00493	ATM98_RS02390
ATM98_RS02430	SM00861	Transketolase, pyrimidine binding domain
ATM98_RS02455	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02480	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02480	SM00962	SRP54-type protein, GTPase domain
ATM98_RS02480	SM00963	SRP54-type protein, helical bundle domain
ATM98_RS02495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATM98_RS02495	SM00866	ATM98_RS02495
ATM98_RS02545	SM00937	ATM98_RS02545
ATM98_RS02580	SM01240	ATM98_RS02580
ATM98_RS02590	SM01266	ATM98_RS02590
ATM98_RS02665	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02670	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02695	SM00047	Lysozyme subfamily 2
ATM98_RS02705	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02705	SM00994	ClpX C4-type zinc finger
ATM98_RS02705	SM01086	C-terminal, D2-small domain, of ClpB protein
ATM98_RS02735	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02770	SM00420	helix_turn_helix, Deoxyribose operon repressor
ATM98_RS02770	SM01134	ATM98_RS02770
ATM98_RS02830	SM00838	Elongation factor G C-terminus
ATM98_RS02840	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS02855	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATM98_RS02860	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
ATM98_RS02920	SM00487	DEAD-like helicases superfamily
ATM98_RS02920	SM00490	helicase superfamily c-terminal domain
ATM98_RS02935	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02940	SM00448	cheY-homologous receiver domain
ATM98_RS02940	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS02945	SM00387	Histidine kinase-like ATPases
ATM98_RS02945	SM00388	His Kinase A (phosphoacceptor) domain
ATM98_RS02955	SM00062	Bacterial periplasmic substrate-binding proteins
ATM98_RS02955	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ATM98_RS02960	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02970	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02975	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS02995	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATM98_RS03015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATM98_RS03095	SM00642	Alpha-amylase domain
ATM98_RS03100	SM00892	DNA/RNA non-specific endonuclease
ATM98_RS03235	SM00642	Alpha-amylase domain
ATM98_RS03240	SM00046	Diacylglycerol kinase catalytic domain (presumed)
ATM98_RS03245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ATM98_RS03245	SM00292	breast cancer carboxy-terminal domain
ATM98_RS03245	SM00532	Ligase N family
ATM98_RS03260	SM00873	B3/4 domain
ATM98_RS03265	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATM98_RS03280	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATM98_RS03330	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03335	SM00062	Bacterial periplasmic substrate-binding proteins
ATM98_RS03335	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ATM98_RS03395	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03505	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03545	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03560	SM01133	ATM98_RS03560
ATM98_RS03565	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
ATM98_RS03605	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03615	SM00642	Alpha-amylase domain
ATM98_RS03625	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
ATM98_RS03715	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03720	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03735	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03755	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03765	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS03775	SM00873	B3/4 domain
ATM98_RS03775	SM00874	tRNA synthetase B5 domain
ATM98_RS03775	SM00896	Ferredoxin-fold anticodon binding domain
ATM98_RS03810	SM00028	Tetratricopeptide repeats
ATM98_RS03830	SM01192	ATM98_RS03830
ATM98_RS03830	SM01193	ATM98_RS03830
ATM98_RS03850	SM00387	Histidine kinase-like ATPases
ATM98_RS03850	SM00433	TopoisomeraseII
ATM98_RS03875	SM00479	ATM98_RS03875
ATM98_RS03875	SM00487	DEAD-like helicases superfamily
ATM98_RS03875	SM00491	ATM98_RS03875
ATM98_RS03880	SM00849	Metallo-beta-lactamase superfamily
ATM98_RS03890	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS03895	SM00937	ATM98_RS03895
ATM98_RS03910	SM00831	Cation transporter/ATPase, N-terminus
ATM98_RS03920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATM98_RS03970	SM00855	Phosphoglycerate mutase family
ATM98_RS03985	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04055	SM00731	SprT homologues.
ATM98_RS04060	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS04060	SM00732	Likely ribonuclease with RNase H fold.
ATM98_RS04080	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04080	SM00962	SRP54-type protein, GTPase domain
ATM98_RS04080	SM00963	SRP54-type protein, helical bundle domain
ATM98_RS04095	SM00968	SMC proteins Flexible Hinge Domain
ATM98_RS04100	SM00358	Double-stranded RNA binding motif
ATM98_RS04100	SM00535	Ribonuclease III family
ATM98_RS04115	SM00849	Metallo-beta-lactamase superfamily
ATM98_RS04120	SM00091	PAS domain
ATM98_RS04120	SM00387	Histidine kinase-like ATPases
ATM98_RS04120	SM00388	His Kinase A (phosphoacceptor) domain
ATM98_RS04125	SM00448	cheY-homologous receiver domain
ATM98_RS04125	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS04130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ATM98_RS04145	SM00354	helix_turn _helix lactose operon repressor
ATM98_RS04175	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04195	SM00450	Rhodanese Homology Domain
ATM98_RS04250	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS04250	SM00955	ATM98_RS04250
ATM98_RS04270	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
ATM98_RS04270	SM01232	ATM98_RS04270
ATM98_RS04290	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04295	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04310	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
ATM98_RS04310	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
ATM98_RS04345	SM00649	Ribosomal protein L11/L12
ATM98_RS04365	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04365	SM00843	ATM98_RS04365
ATM98_RS04385	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04430	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATM98_RS04435	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04440	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04475	SM00831	Cation transporter/ATPase, N-terminus
ATM98_RS04510	SM01131	ATM98_RS04510
ATM98_RS04525	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04545	SM01091	Transporter associated domain
ATM98_RS04560	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04580	SM00729	Elongator protein 3, MiaB family, Radical SAM
ATM98_RS04590	SM00014	Acid phosphatase homologues
ATM98_RS04615	SM01234	ATM98_RS04615
ATM98_RS04620	SM00363	S4 RNA-binding domain
ATM98_RS04680	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ATM98_RS04725	SM00487	DEAD-like helicases superfamily
ATM98_RS04725	SM00490	helicase superfamily c-terminal domain
ATM98_RS04745	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04770	SM00448	cheY-homologous receiver domain
ATM98_RS04770	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS04775	SM01350	ATM98_RS04775
ATM98_RS04830	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04850	SM00450	Rhodanese Homology Domain
ATM98_RS04865	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS04890	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS04890	SM00930	ATM98_RS04890
ATM98_RS04905	SM00062	Bacterial periplasmic substrate-binding proteins
ATM98_RS04950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATM98_RS04960	SM01103	ATM98_RS04960
ATM98_RS04985	SM00829	Enoylreductase
ATM98_RS04995	SM00845	GatB domain
ATM98_RS05035	SM00870	ATM98_RS05035
ATM98_RS05040	SM00487	DEAD-like helicases superfamily
ATM98_RS05040	SM00490	helicase superfamily c-terminal domain
ATM98_RS05045	SM01005	Alanine racemase, C-terminal domain
ATM98_RS05060	SM00957	SecA DEAD-like domain
ATM98_RS05060	SM00958	SecA preprotein cross-linking domain
ATM98_RS05070	SM00422	helix_turn_helix, mercury resistance
ATM98_RS05085	SM00014	Acid phosphatase homologues
ATM98_RS05105	SM00640	Glycosyl hydrolases family 32
ATM98_RS05110	SM00354	helix_turn _helix lactose operon repressor
ATM98_RS05125	SM00841	Elongation factor P, C-terminal
ATM98_RS05125	SM01185	ATM98_RS05125
ATM98_RS05135	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS05205	SM00642	Alpha-amylase domain
ATM98_RS05225	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS05235	SM00387	Histidine kinase-like ATPases
ATM98_RS05235	SM00388	His Kinase A (phosphoacceptor) domain
ATM98_RS05240	SM00448	cheY-homologous receiver domain
ATM98_RS05240	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS05275	SM00342	helix_turn_helix, arabinose operon control protein
ATM98_RS05280	SM00534	ATPase domain of DNA mismatch repair MUTS family
ATM98_RS05285	SM00854	Bacterial capsule synthesis protein PGA_cap
ATM98_RS05310	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ATM98_RS05315	SM00271	DnaJ molecular chaperone homology domain
ATM98_RS05345	SM00855	Phosphoglycerate mutase family
ATM98_RS05350	SM00855	Phosphoglycerate mutase family
ATM98_RS05405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ATM98_RS05460	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS05490	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS05515	SM00387	Histidine kinase-like ATPases
ATM98_RS05515	SM00388	His Kinase A (phosphoacceptor) domain
ATM98_RS05520	SM00448	cheY-homologous receiver domain
ATM98_RS05520	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS05535	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS05555	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS05575	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS05670	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ATM98_RS05685	SM00642	Alpha-amylase domain
ATM98_RS05690	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS05700	SM00535	Ribonuclease III family
ATM98_RS05705	SM00840	ATM98_RS05705
ATM98_RS05720	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS05720	SM00322	K homology RNA-binding domain
ATM98_RS05735	SM00448	cheY-homologous receiver domain
ATM98_RS05735	SM00850	LytTr DNA-binding domain
ATM98_RS05750	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS05770	SM01387	ATM98_RS05770
ATM98_RS05775	SM00363	S4 RNA-binding domain
ATM98_RS05805	SM00463	Small MutS-related domain
ATM98_RS05805	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
ATM98_RS05805	SM00534	ATPase domain of DNA mismatch repair MUTS family
ATM98_RS05910	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
ATM98_RS05910	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
ATM98_RS05920	SM00479	ATM98_RS05920
ATM98_RS05985	SM00849	Metallo-beta-lactamase superfamily
ATM98_RS05990	SM01230	ATM98_RS05990
ATM98_RS05995	SM00422	helix_turn_helix, mercury resistance
ATM98_RS06015	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ATM98_RS06020	SM00838	Elongation factor G C-terminus
ATM98_RS06020	SM00889	Elongation factor G, domain IV
ATM98_RS06055	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
ATM98_RS06080	SM00650	Ribosomal RNA adenine dimethylases
ATM98_RS06090	SM00493	ATM98_RS06090
ATM98_RS06110	SM00393	Putative single-stranded nucleic acids-binding domain
ATM98_RS06110	SM01245	ATM98_RS06110
ATM98_RS06145	SM00849	Metallo-beta-lactamase superfamily
ATM98_RS06155	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06185	SM00710	Parallel beta-helix repeats
ATM98_RS06185	SM01208	ATM98_RS06185
ATM98_RS06195	SM00947	Carbonic anhydrase
ATM98_RS06205	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06210	SM00855	Phosphoglycerate mutase family
ATM98_RS06220	SM00855	Phosphoglycerate mutase family
ATM98_RS06310	SM00788	Adenylosuccinate synthetase
ATM98_RS06355	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06355	SM01086	C-terminal, D2-small domain, of ClpB protein
ATM98_RS06365	SM00237	Domains in Na-Ca exchangers and integrin-beta4
ATM98_RS06365	SM00812	Alpha-L-fucosidase
ATM98_RS06365	SM01208	ATM98_RS06365
ATM98_RS06370	SM01208	ATM98_RS06370
ATM98_RS06400	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
ATM98_RS06400	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ATM98_RS06515	SM00155	Phospholipase D. Active site motifs.
ATM98_RS06535	SM00732	Likely ribonuclease with RNase H fold.
ATM98_RS06565	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06570	SM00852	Probable molybdopterin binding domain
ATM98_RS06585	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ATM98_RS06590	SM00853	MutL C terminal dimerisation domain
ATM98_RS06590	SM01340	ATM98_RS06590
ATM98_RS06595	SM00850	LytTr DNA-binding domain
ATM98_RS06605	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
ATM98_RS06605	SM00534	ATPase domain of DNA mismatch repair MUTS family
ATM98_RS06615	SM00836	DALR anticodon binding domain
ATM98_RS06615	SM01016	Arginyl tRNA synthetase N terminal dom
ATM98_RS06665	SM00354	helix_turn _helix lactose operon repressor
ATM98_RS06670	SM00642	Alpha-amylase domain
ATM98_RS06755	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06760	SM00363	S4 RNA-binding domain
ATM98_RS06760	SM01390	ATM98_RS06760
ATM98_RS06785	SM01228	ATM98_RS06785
ATM98_RS06805	SM00257	Lysin motif
ATM98_RS06825	SM00257	Lysin motif
ATM98_RS06835	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06840	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06870	SM00116	Domain in cystathionine beta-synthase and other proteins.
ATM98_RS06870	SM01240	ATM98_RS06870
ATM98_RS06880	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06900	SM00448	cheY-homologous receiver domain
ATM98_RS06900	SM00850	LytTr DNA-binding domain
ATM98_RS06920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ATM98_RS06925	SM00470	ParB-like nuclease domain
ATM98_RS06930	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS06930	SM00760	Bacterial dnaA protein helix-turn-helix domain
ATM98_RS06935	SM00480	DNA polymerase III beta subunit
ATM98_RS06960	SM00487	DEAD-like helicases superfamily
ATM98_RS06960	SM00490	helicase superfamily c-terminal domain
ATM98_RS06960	SM00982	ATM98_RS06960
ATM98_RS06960	SM01058	CarD-like/TRCF domain
ATM98_RS06965	SM00363	S4 RNA-binding domain
ATM98_RS06980	SM00977	TilS substrate C-terminal domain
ATM98_RS06990	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS07120	SM01400	ATM98_RS07120
ATM98_RS07165	SM01211	ATM98_RS07165
ATM98_RS07185	SM00798	AICARFT/IMPCHase bienzyme
ATM98_RS07185	SM00851	MGS-like domain
ATM98_RS07195	SM01209	ATM98_RS07195
ATM98_RS07195	SM01210	ATM98_RS07195
ATM98_RS07200	SM01001	AIR carboxylase
ATM98_RS07220	SM00998	Adenylosuccinate lyase C-terminus
ATM98_RS07225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ATM98_RS07225	SM00866	ATM98_RS07225
ATM98_RS07270	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS07280	SM00226	Low molecular weight phosphatase family
ATM98_RS07285	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
ATM98_RS07350	SM01130	ATM98_RS07350
ATM98_RS07415	SM00257	Lysin motif
ATM98_RS07435	SM00244	prohibitin homologues
ATM98_RS07470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ATM98_RS07530	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATM98_RS07540	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
ATM98_RS07540	SM00474	3'-5' exonuclease
ATM98_RS07540	SM00475	5'-3' exonuclease
ATM98_RS07540	SM00482	DNA polymerase A domain
ATM98_RS07545	SM00881	CoA binding domain
ATM98_RS07560	SM01403	ATM98_RS07560
ATM98_RS07580	SM01382	ATM98_RS07580
ATM98_RS07580	SM01383	ATM98_RS07580
ATM98_RS07595	SM00322	K homology RNA-binding domain
ATM98_RS07615	SM01374	ATM98_RS07615
ATM98_RS07620	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ATM98_RS07675	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS07690	SM00662	RNA polymerases D
ATM98_RS07810	SM00530	Helix-turn-helix XRE-family like proteins 
ATM98_RS07820	SM00028	Tetratricopeptide repeats
ATM98_RS07830	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATM98_RS07835	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS07860	SM01149	ATM98_RS07860
ATM98_RS07865	SM00872	Alpha mannosidase, middle domain
ATM98_RS07900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATM98_RS07905	SM00342	helix_turn_helix, arabinose operon control protein
ATM98_RS07905	SM00448	cheY-homologous receiver domain
ATM98_RS07915	SM00363	S4 RNA-binding domain
ATM98_RS07930	SM00663	RNA polymerase I subunit A N-terminus
ATM98_RS07940	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08005	SM00905	Dihydroneopterin aldolase
ATM98_RS08045	SM00387	Histidine kinase-like ATPases
ATM98_RS08050	SM00421	helix_turn_helix, Lux Regulon
ATM98_RS08050	SM00448	cheY-homologous receiver domain
ATM98_RS08085	SM00883	Chaperonin 10 Kd subunit
ATM98_RS08100	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08110	SM00448	cheY-homologous receiver domain
ATM98_RS08110	SM00862	Transcriptional regulatory protein, C terminal
ATM98_RS08115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ATM98_RS08115	SM00387	Histidine kinase-like ATPases
ATM98_RS08115	SM00388	His Kinase A (phosphoacceptor) domain
ATM98_RS08125	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08140	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08180	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ATM98_RS08180	SM00954	Region found in RelA / SpoT proteins
ATM98_RS08190	SM00529	Helix-turn-helix diphteria tox regulatory element
ATM98_RS08215	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08230	SM00420	helix_turn_helix, Deoxyribose operon repressor
ATM98_RS08230	SM01134	ATM98_RS08230
ATM98_RS08305	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08325	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08325	SM01086	C-terminal, D2-small domain, of ClpB protein
ATM98_RS08335	SM01323	ATM98_RS08335
ATM98_RS08360	SM00479	ATM98_RS08360
ATM98_RS08360	SM00481	DNA polymerase alpha chain like domain
ATM98_RS08375	SM01208	ATM98_RS08375
ATM98_RS08410	SM00873	B3/4 domain
ATM98_RS08425	SM00420	helix_turn_helix, Deoxyribose operon repressor
ATM98_RS08425	SM01134	ATM98_RS08425
ATM98_RS08445	SM01133	ATM98_RS08445
ATM98_RS08450	SM01061	CAT RNA binding domain
ATM98_RS08470	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08510	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08510	SM01086	C-terminal, D2-small domain, of ClpB protein
ATM98_RS08560	SM00850	LytTr DNA-binding domain
ATM98_RS08580	SM01120	ATM98_RS08580
ATM98_RS08580	SM01121	ATM98_RS08580
ATM98_RS08600	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08615	SM00421	helix_turn_helix, Lux Regulon
ATM98_RS08615	SM00448	cheY-homologous receiver domain
ATM98_RS08640	SM00244	prohibitin homologues
ATM98_RS08650	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08655	SM00062	Bacterial periplasmic substrate-binding proteins
ATM98_RS08680	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08710	SM00936	Penicillin-binding protein 5, C-terminal domain 
ATM98_RS08735	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08740	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08780	SM00347	helix_turn_helix multiple antibiotic resistance protein
ATM98_RS08800	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
ATM98_RS08805	SM00822	ATM98_RS08805
ATM98_RS08810	SM00825	Beta-ketoacyl synthase
ATM98_RS08825	SM00878	Biotin carboxylase C-terminal domain
ATM98_RS08865	SM00829	Enoylreductase
ATM98_RS08905	SM00382	ATPases associated with a variety of cellular activities
ATM98_RS08930	SM00316	Ribosomal protein S1-like RNA-binding domain
ATM98_RS08930	SM00322	K homology RNA-binding domain
ATM98_RS08945	SM00173	Ras subfamily of RAS small GTPases
ATM98_RS09015	SM00740	ATM98_RS09015
ATM98_RS09025	SM00487	DEAD-like helicases superfamily
ATM98_RS09025	SM00490	helicase superfamily c-terminal domain
ATM98_RS09035	SM00382	ATPases associated with a variety of cellular activities
