A6J31_RS00065	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00080	SM00421	helix_turn_helix, Lux Regulon
A6J31_RS00080	SM00448	cheY-homologous receiver domain
A6J31_RS00135	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00140	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00215	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00225	SM00954	Region found in RelA / SpoT proteins
A6J31_RS00255	SM00892	DNA/RNA non-specific endonuclease
A6J31_RS00270	SM00448	cheY-homologous receiver domain
A6J31_RS00270	SM00850	LytTr DNA-binding domain
A6J31_RS00375	SM00448	cheY-homologous receiver domain
A6J31_RS00375	SM00850	LytTr DNA-binding domain
A6J31_RS00390	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00500	SM01022	A6J31_RS00500
A6J31_RS00515	SM00387	Histidine kinase-like ATPases
A6J31_RS00515	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS00520	SM00448	cheY-homologous receiver domain
A6J31_RS00520	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS00525	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00575	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00595	SM00028	Tetratricopeptide repeats
A6J31_RS00595	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00600	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00635	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00650	SM00421	helix_turn_helix, Lux Regulon
A6J31_RS00650	SM00448	cheY-homologous receiver domain
A6J31_RS00685	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00695	SM00448	cheY-homologous receiver domain
A6J31_RS00695	SM00850	LytTr DNA-binding domain
A6J31_RS00710	SM01022	A6J31_RS00710
A6J31_RS00725	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00740	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00775	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00815	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00820	SM00287	Bacterial SH3 domain homologues
A6J31_RS00835	SM00287	Bacterial SH3 domain homologues
A6J31_RS00850	SM00448	cheY-homologous receiver domain
A6J31_RS00850	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS00855	SM00387	Histidine kinase-like ATPases
A6J31_RS00855	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS00865	SM01260	A6J31_RS00865
A6J31_RS00875	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00930	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS00950	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00955	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS00990	SM00487	DEAD-like helicases superfamily
A6J31_RS01120	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01140	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A6J31_RS01155	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS01160	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01165	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01175	SM00954	Region found in RelA / SpoT proteins
A6J31_RS01180	SM00448	cheY-homologous receiver domain
A6J31_RS01180	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS01185	SM00387	Histidine kinase-like ATPases
A6J31_RS01185	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS01210	SM00257	Lysin motif
A6J31_RS01290	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J31_RS01295	SM00287	Bacterial SH3 domain homologues
A6J31_RS01300	SM00850	LytTr DNA-binding domain
A6J31_RS01310	SM00448	cheY-homologous receiver domain
A6J31_RS01310	SM00850	LytTr DNA-binding domain
A6J31_RS01325	SM00287	Bacterial SH3 domain homologues
A6J31_RS01340	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6J31_RS01460	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01485	SM00861	Transketolase, pyrimidine binding domain
A6J31_RS01525	SM00938	Nitrogen regulatory protein P-II
A6J31_RS01530	SM00047	Lysozyme subfamily 2
A6J31_RS01545	SM00287	Bacterial SH3 domain homologues
A6J31_RS01615	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS01640	SM00363	S4 RNA-binding domain
A6J31_RS01660	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6J31_RS01665	SM00851	MGS-like domain
A6J31_RS01665	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6J31_RS01665	SM01209	A6J31_RS01665
A6J31_RS01680	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01715	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01720	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01740	SM00448	cheY-homologous receiver domain
A6J31_RS01740	SM00850	LytTr DNA-binding domain
A6J31_RS01745	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01755	SM00450	Rhodanese Homology Domain
A6J31_RS01760	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS01780	SM00363	S4 RNA-binding domain
A6J31_RS01790	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6J31_RS01790	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6J31_RS01810	SM00448	cheY-homologous receiver domain
A6J31_RS01810	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS01815	SM00387	Histidine kinase-like ATPases
A6J31_RS01815	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS01845	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01855	SM00831	Cation transporter/ATPase, N-terminus
A6J31_RS01900	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J31_RS01955	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS01955	SM00994	ClpX C4-type zinc finger
A6J31_RS01955	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J31_RS01985	SM01207	A6J31_RS01985
A6J31_RS01990	SM00387	Histidine kinase-like ATPases
A6J31_RS01990	SM00433	TopoisomeraseII
A6J31_RS02005	SM00434	DNA Topoisomerase IV
A6J31_RS02030	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS02075	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02075	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J31_RS02095	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02100	SM00899	A6J31_RS02100
A6J31_RS02135	SM00493	A6J31_RS02135
A6J31_RS02140	SM01061	CAT RNA binding domain
A6J31_RS02160	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6J31_RS02160	SM01232	A6J31_RS02160
A6J31_RS02185	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS02185	SM00955	A6J31_RS02185
A6J31_RS02200	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS02210	SM00354	helix_turn _helix lactose operon repressor
A6J31_RS02230	SM01192	A6J31_RS02230
A6J31_RS02230	SM01193	A6J31_RS02230
A6J31_RS02345	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J31_RS02400	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02460	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02465	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02490	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6J31_RS02565	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02580	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J31_RS02610	SM00861	Transketolase, pyrimidine binding domain
A6J31_RS02700	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS02700	SM00732	Likely ribonuclease with RNase H fold.
A6J31_RS02705	SM00731	SprT homologues.
A6J31_RS02785	SM00487	DEAD-like helicases superfamily
A6J31_RS02785	SM00490	helicase superfamily c-terminal domain
A6J31_RS02800	SM00257	Lysin motif
A6J31_RS02820	SM00855	Phosphoglycerate mutase family
A6J31_RS02875	SM00710	Parallel beta-helix repeats
A6J31_RS02880	SM00892	DNA/RNA non-specific endonuclease
A6J31_RS02895	SM00529	Helix-turn-helix diphteria tox regulatory element
A6J31_RS02910	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS02975	SM00838	Elongation factor G C-terminus
A6J31_RS03000	SM00842	Cell division protein FtsA
A6J31_RS03005	SM00864	Tubulin/FtsZ family, GTPase domain
A6J31_RS03005	SM00865	Tubulin/FtsZ family, C-terminal domain
A6J31_RS03025	SM00363	S4 RNA-binding domain
A6J31_RS03065	SM01329	A6J31_RS03065
A6J31_RS03100	SM00487	DEAD-like helicases superfamily
A6J31_RS03100	SM00490	helicase superfamily c-terminal domain
A6J31_RS03110	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS03210	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J31_RS03325	SM00642	Alpha-amylase domain
A6J31_RS03410	SM00478	endonuclease III
A6J31_RS03410	SM00525	A6J31_RS03410
A6J31_RS03435	SM00363	S4 RNA-binding domain
A6J31_RS03465	SM00411	bacterial (prokaryotic) histone like domain
A6J31_RS03480	SM00855	Phosphoglycerate mutase family
A6J31_RS03485	SM00917	LeuA allosteric (dimerisation) domain
A6J31_RS03490	SM01329	A6J31_RS03490
A6J31_RS03510	SM00481	DNA polymerase alpha chain like domain
A6J31_RS03545	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS03550	SM00849	Metallo-beta-lactamase superfamily
A6J31_RS03580	SM00830	Chorismate mutase type II
A6J31_RS03620	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS03705	SM00892	DNA/RNA non-specific endonuclease
A6J31_RS03720	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS03725	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS03740	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS03745	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS03750	SM00448	cheY-homologous receiver domain
A6J31_RS03750	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS03755	SM00091	PAS domain
A6J31_RS03755	SM00387	Histidine kinase-like ATPases
A6J31_RS03755	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS03760	SM00849	Metallo-beta-lactamase superfamily
A6J31_RS03790	SM00831	Cation transporter/ATPase, N-terminus
A6J31_RS03815	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS03835	SM00028	Tetratricopeptide repeats
A6J31_RS03845	SM00047	Lysozyme subfamily 2
A6J31_RS03845	SM00646	A6J31_RS03845
A6J31_RS03865	SM00257	Lysin motif
A6J31_RS03910	SM00986	Uracil DNA glycosylase superfamily
A6J31_RS03910	SM00987	UreE urease accessory protein, C-terminal domain 
A6J31_RS04045	SM00855	Phosphoglycerate mutase family
A6J31_RS04050	SM00855	Phosphoglycerate mutase family
A6J31_RS04055	SM00855	Phosphoglycerate mutase family
A6J31_RS04105	SM00986	Uracil DNA glycosylase superfamily
A6J31_RS04105	SM00987	UreE urease accessory protein, C-terminal domain 
A6J31_RS04135	SM00861	Transketolase, pyrimidine binding domain
A6J31_RS04155	SM00646	A6J31_RS04155
A6J31_RS04160	SM00642	Alpha-amylase domain
A6J31_RS04195	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04215	SM00354	helix_turn _helix lactose operon repressor
A6J31_RS04255	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04260	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04300	SM00904	Riboflavin kinase
A6J31_RS04355	SM00342	helix_turn_helix, arabinose operon control protein
A6J31_RS04370	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS04385	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J31_RS04440	SM00487	DEAD-like helicases superfamily
A6J31_RS04465	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04500	SM01321	A6J31_RS04500
A6J31_RS04510	SM00829	Enoylreductase
A6J31_RS04550	SM00829	Enoylreductase
A6J31_RS04565	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04570	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04595	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J31_RS04610	SM00478	endonuclease III
A6J31_RS04620	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04625	SM00829	Enoylreductase
A6J31_RS04630	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS04635	SM00506	Appr-1"-p processing enzyme
A6J31_RS04670	SM00838	Elongation factor G C-terminus
A6J31_RS04680	SM00450	Rhodanese Homology Domain
A6J31_RS04685	SM00562	A6J31_RS04685
A6J31_RS04700	SM00387	Histidine kinase-like ATPases
A6J31_RS04700	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS04705	SM00448	cheY-homologous receiver domain
A6J31_RS04705	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS04720	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04725	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J31_RS04725	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J31_RS04725	SM00493	A6J31_RS04725
A6J31_RS04750	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS04765	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04765	SM00962	SRP54-type protein, GTPase domain
A6J31_RS04765	SM00963	SRP54-type protein, helical bundle domain
A6J31_RS04775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J31_RS04775	SM00866	A6J31_RS04775
A6J31_RS04790	SM00829	Enoylreductase
A6J31_RS04810	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS04815	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04840	SM00047	Lysozyme subfamily 2
A6J31_RS04945	SM00479	A6J31_RS04945
A6J31_RS04945	SM00487	DEAD-like helicases superfamily
A6J31_RS04945	SM00491	A6J31_RS04945
A6J31_RS04950	SM00849	Metallo-beta-lactamase superfamily
A6J31_RS04965	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS04980	SM01133	A6J31_RS04980
A6J31_RS04985	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A6J31_RS05005	SM00387	Histidine kinase-like ATPases
A6J31_RS05005	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS05010	SM00448	cheY-homologous receiver domain
A6J31_RS05010	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS05090	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05095	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05125	SM00937	A6J31_RS05125
A6J31_RS05185	SM00434	DNA Topoisomerase IV
A6J31_RS05200	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J31_RS05240	SM00873	B3/4 domain
A6J31_RS05240	SM00874	tRNA synthetase B5 domain
A6J31_RS05240	SM00896	Ferredoxin-fold anticodon binding domain
A6J31_RS05260	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS05270	SM00968	SMC proteins Flexible Hinge Domain
A6J31_RS05275	SM00358	Double-stranded RNA binding motif
A6J31_RS05275	SM00535	Ribonuclease III family
A6J31_RS05280	SM01130	A6J31_RS05280
A6J31_RS05285	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6J31_RS05295	SM00155	Phospholipase D. Active site motifs.
A6J31_RS05305	SM00155	Phospholipase D. Active site motifs.
A6J31_RS05310	SM00465	GIY-YIG type nucleases (URI domain)
A6J31_RS05330	SM00635	Bacterial Ig-like domain 2
A6J31_RS05330	SM00640	Glycosyl hydrolases family 32
A6J31_RS05405	SM00421	helix_turn_helix, Lux Regulon
A6J31_RS05405	SM00448	cheY-homologous receiver domain
A6J31_RS05420	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05445	SM00849	Metallo-beta-lactamase superfamily
A6J31_RS05485	SM00271	DnaJ molecular chaperone homology domain
A6J31_RS05510	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05535	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05540	SM00387	Histidine kinase-like ATPases
A6J31_RS05545	SM00448	cheY-homologous receiver domain
A6J31_RS05545	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS05640	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05655	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS05680	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05700	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05710	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS05765	SM01038	Beta galactosidase small chain
A6J31_RS05795	SM00354	helix_turn _helix lactose operon repressor
A6J31_RS05800	SM00642	Alpha-amylase domain
A6J31_RS05805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J31_RS05805	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS05810	SM00448	cheY-homologous receiver domain
A6J31_RS05810	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS05820	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05855	SM01120	A6J31_RS05855
A6J31_RS05875	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS05900	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6J31_RS06025	SM00919	Malic enzyme, NAD binding domain
A6J31_RS06025	SM01274	A6J31_RS06025
A6J31_RS06030	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS06050	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS06055	SM01266	A6J31_RS06055
A6J31_RS06135	SM00957	SecA DEAD-like domain
A6J31_RS06135	SM00958	SecA preprotein cross-linking domain
A6J31_RS06180	SM01208	A6J31_RS06180
A6J31_RS06210	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06215	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06220	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06265	SM00642	Alpha-amylase domain
A6J31_RS06270	SM00642	Alpha-amylase domain
A6J31_RS06275	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06275	SM00843	A6J31_RS06275
A6J31_RS06305	SM00421	helix_turn_helix, Lux Regulon
A6J31_RS06305	SM00448	cheY-homologous receiver domain
A6J31_RS06310	SM00387	Histidine kinase-like ATPases
A6J31_RS06325	SM00220	Serine/Threonine protein kinases, catalytic domain
A6J31_RS06325	SM00740	A6J31_RS06325
A6J31_RS06330	SM00331	Sigma factor PP2C-like phosphatases
A6J31_RS06330	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6J31_RS06345	SM00487	DEAD-like helicases superfamily
A6J31_RS06345	SM00490	helicase superfamily c-terminal domain
A6J31_RS06350	SM01409	A6J31_RS06350
A6J31_RS06355	SM00072	Guanylate kinase homologues.
A6J31_RS06360	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06360	SM00962	SRP54-type protein, GTPase domain
A6J31_RS06360	SM00963	SRP54-type protein, helical bundle domain
A6J31_RS06375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J31_RS06380	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06390	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06395	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06435	SM00954	Region found in RelA / SpoT proteins
A6J31_RS06440	SM01118	A6J31_RS06440
A6J31_RS06445	SM01400	A6J31_RS06445
A6J31_RS06460	SM00881	CoA binding domain
A6J31_RS06480	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06575	SM00400	zinc finger
A6J31_RS06575	SM00493	A6J31_RS06575
A6J31_RS06590	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS06590	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J31_RS06600	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS06600	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J31_RS06605	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS06605	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J31_RS06615	SM00487	DEAD-like helicases superfamily
A6J31_RS06615	SM00490	helicase superfamily c-terminal domain
A6J31_RS06630	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS06630	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J31_RS06635	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06655	SM00363	S4 RNA-binding domain
A6J31_RS06700	SM00387	Histidine kinase-like ATPases
A6J31_RS06700	SM00433	TopoisomeraseII
A6J31_RS06760	SM00244	prohibitin homologues
A6J31_RS06780	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS06795	SM00905	Dihydroneopterin aldolase
A6J31_RS06800	SM00642	Alpha-amylase domain
A6J31_RS06805	SM01321	A6J31_RS06805
A6J31_RS06850	SM00850	LytTr DNA-binding domain
A6J31_RS06905	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J31_RS06910	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J31_RS06910	SM00292	breast cancer carboxy-terminal domain
A6J31_RS06910	SM00532	Ligase N family
A6J31_RS06930	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J31_RS06945	SM00849	Metallo-beta-lactamase superfamily
A6J31_RS06950	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J31_RS06955	SM00563	Phosphate acyltransferases
A6J31_RS06975	SM00487	DEAD-like helicases superfamily
A6J31_RS06975	SM00490	helicase superfamily c-terminal domain
A6J31_RS06995	SM01321	A6J31_RS06995
A6J31_RS07030	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS07030	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J31_RS07035	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07120	SM00830	Chorismate mutase type II
A6J31_RS07155	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07165	SM00422	helix_turn_helix, mercury resistance
A6J31_RS07170	SM00479	A6J31_RS07170
A6J31_RS07215	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07255	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07255	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J31_RS07285	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J31_RS07295	SM01103	A6J31_RS07295
A6J31_RS07315	SM00829	Enoylreductase
A6J31_RS07325	SM00845	GatB domain
A6J31_RS07400	SM01091	Transporter associated domain
A6J31_RS07405	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07425	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J31_RS07455	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07465	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS07485	SM01057	Eukaryotic-type carbonic anhydrase
A6J31_RS07520	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A6J31_RS07520	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
A6J31_RS07550	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07555	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07595	SM00487	DEAD-like helicases superfamily
A6J31_RS07595	SM00490	helicase superfamily c-terminal domain
A6J31_RS07605	SM00740	A6J31_RS07605
A6J31_RS07660	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07705	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS07725	SM00850	LytTr DNA-binding domain
A6J31_RS07745	SM00870	A6J31_RS07745
A6J31_RS07750	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS07770	SM00487	DEAD-like helicases superfamily
A6J31_RS07770	SM00490	helicase superfamily c-terminal domain
A6J31_RS07775	SM01005	Alanine racemase, C-terminal domain
A6J31_RS07795	SM00957	SecA DEAD-like domain
A6J31_RS07795	SM00958	SecA preprotein cross-linking domain
A6J31_RS07820	SM00640	Glycosyl hydrolases family 32
A6J31_RS07825	SM00354	helix_turn _helix lactose operon repressor
A6J31_RS07840	SM00841	Elongation factor P, C-terminal
A6J31_RS07840	SM01185	A6J31_RS07840
A6J31_RS07930	SM00857	Resolvase, N terminal domain
A6J31_RS07960	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J31_RS07960	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J31_RS07960	SM00493	A6J31_RS07960
A6J31_RS08075	SM00478	endonuclease III
A6J31_RS08085	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6J31_RS08085	SM00474	3'-5' exonuclease
A6J31_RS08085	SM00475	5'-3' exonuclease
A6J31_RS08085	SM00482	DNA polymerase A domain
A6J31_RS08090	SM00463	Small MutS-related domain
A6J31_RS08090	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J31_RS08090	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J31_RS08115	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS08150	SM00849	Metallo-beta-lactamase superfamily
A6J31_RS08155	SM00257	Lysin motif
A6J31_RS08160	SM01230	A6J31_RS08160
A6J31_RS08165	SM00422	helix_turn_helix, mercury resistance
A6J31_RS08185	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6J31_RS08190	SM00838	Elongation factor G C-terminus
A6J31_RS08190	SM00889	Elongation factor G, domain IV
A6J31_RS08220	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A6J31_RS08240	SM00650	Ribosomal RNA adenine dimethylases
A6J31_RS08245	SM00493	A6J31_RS08245
A6J31_RS08255	SM00881	CoA binding domain
A6J31_RS08265	SM00506	Appr-1"-p processing enzyme
A6J31_RS08390	SM00393	Putative single-stranded nucleic acids-binding domain
A6J31_RS08390	SM01245	A6J31_RS08390
A6J31_RS08415	SM00448	cheY-homologous receiver domain
A6J31_RS08415	SM00850	LytTr DNA-binding domain
A6J31_RS08460	SM00649	Ribosomal protein L11/L12
A6J31_RS08470	SM00947	Carbonic anhydrase
A6J31_RS08480	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS08640	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS08695	SM00663	RNA polymerase I subunit A N-terminus
A6J31_RS08710	SM00363	S4 RNA-binding domain
A6J31_RS08735	SM01120	A6J31_RS08735
A6J31_RS08735	SM01121	A6J31_RS08735
A6J31_RS08775	SM00642	Alpha-amylase domain
A6J31_RS08785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J31_RS08785	SM00866	A6J31_RS08785
A6J31_RS08825	SM00662	RNA polymerases D
A6J31_RS08845	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS08900	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J31_RS08905	SM01374	A6J31_RS08905
A6J31_RS08925	SM00322	K homology RNA-binding domain
A6J31_RS08940	SM01382	A6J31_RS08940
A6J31_RS08940	SM01383	A6J31_RS08940
A6J31_RS08960	SM01403	A6J31_RS08960
A6J31_RS08965	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS08975	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
A6J31_RS08980	SM00226	Low molecular weight phosphatase family
A6J31_RS08985	SM00788	Adenylosuccinate synthetase
A6J31_RS09000	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS09030	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09045	SM00732	Likely ribonuclease with RNase H fold.
A6J31_RS09180	SM00220	Serine/Threonine protein kinases, catalytic domain
A6J31_RS09190	SM01134	A6J31_RS09190
A6J31_RS09200	SM00267	diguanylate cyclase
A6J31_RS09280	SM00363	S4 RNA-binding domain
A6J31_RS09280	SM01390	A6J31_RS09280
A6J31_RS09305	SM01228	A6J31_RS09305
A6J31_RS09330	SM00257	Lysin motif
A6J31_RS09340	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09345	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09380	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J31_RS09380	SM01240	A6J31_RS09380
A6J31_RS09395	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09430	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6J31_RS09435	SM00470	ParB-like nuclease domain
A6J31_RS09445	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09445	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6J31_RS09450	SM00480	DNA polymerase III beta subunit
A6J31_RS09470	SM00487	DEAD-like helicases superfamily
A6J31_RS09470	SM00490	helicase superfamily c-terminal domain
A6J31_RS09470	SM00982	A6J31_RS09470
A6J31_RS09470	SM01058	CarD-like/TRCF domain
A6J31_RS09475	SM00363	S4 RNA-binding domain
A6J31_RS09495	SM00977	TilS substrate C-terminal domain
A6J31_RS09505	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09630	SM01400	A6J31_RS09630
A6J31_RS09660	SM01211	A6J31_RS09660
A6J31_RS09680	SM00798	AICARFT/IMPCHase bienzyme
A6J31_RS09680	SM00851	MGS-like domain
A6J31_RS09690	SM01209	A6J31_RS09690
A6J31_RS09690	SM01210	A6J31_RS09690
A6J31_RS09695	SM01001	AIR carboxylase
A6J31_RS09710	SM00998	Adenylosuccinate lyase C-terminus
A6J31_RS09715	SM00836	DALR anticodon binding domain
A6J31_RS09715	SM01016	Arginyl tRNA synthetase N terminal dom
A6J31_RS09730	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J31_RS09730	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J31_RS09740	SM00850	LytTr DNA-binding domain
A6J31_RS09750	SM00853	MutL C terminal dimerisation domain
A6J31_RS09750	SM01340	A6J31_RS09750
A6J31_RS09760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J31_RS09770	SM00852	Probable molybdopterin binding domain
A6J31_RS09775	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09865	SM00479	A6J31_RS09865
A6J31_RS09865	SM00481	DNA polymerase alpha chain like domain
A6J31_RS09880	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS09925	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS09925	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J31_RS09930	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6J31_RS09935	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6J31_RS09940	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS09940	SM00322	K homology RNA-binding domain
A6J31_RS09955	SM00840	A6J31_RS09955
A6J31_RS09960	SM00535	Ribonuclease III family
A6J31_RS09965	SM01321	A6J31_RS09965
A6J31_RS09975	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J31_RS09995	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS10035	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS10060	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS10075	SM00854	Bacterial capsule synthesis protein PGA_cap
A6J31_RS10090	SM00855	Phosphoglycerate mutase family
A6J31_RS10100	SM00047	Lysozyme subfamily 2
A6J31_RS10120	SM00271	DnaJ molecular chaperone homology domain
A6J31_RS10220	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J31_RS10220	SM00954	Region found in RelA / SpoT proteins
A6J31_RS10245	SM00100	Cyclic nucleotide-monophosphate binding domain
A6J31_RS10260	SM01387	A6J31_RS10260
A6J31_RS10275	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10280	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS10305	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10345	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS10350	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10380	SM00530	Helix-turn-helix XRE-family like proteins 
A6J31_RS10385	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10395	SM01323	A6J31_RS10395
A6J31_RS10425	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10430	SM00883	Chaperonin 10 Kd subunit
A6J31_RS10475	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6J31_RS10475	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J31_RS10480	SM00014	Acid phosphatase homologues
A6J31_RS10490	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J31_RS10490	SM01134	A6J31_RS10490
A6J31_RS10500	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS10530	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10540	SM00850	LytTr DNA-binding domain
A6J31_RS10550	SM00422	helix_turn_helix, mercury resistance
A6J31_RS10555	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10610	SM00981	A6J31_RS10610
A6J31_RS10620	SM00487	DEAD-like helicases superfamily
A6J31_RS10620	SM00490	helicase superfamily c-terminal domain
A6J31_RS10660	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J31_RS10710	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J31_RS10730	SM00363	S4 RNA-binding domain
A6J31_RS10735	SM01234	A6J31_RS10735
A6J31_RS10760	SM00014	Acid phosphatase homologues
A6J31_RS10770	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10805	SM00988	UreE urease accessory protein, N-terminal domain
A6J31_RS10835	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10840	SM00062	Bacterial periplasmic substrate-binding proteins
A6J31_RS10855	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10855	SM00930	A6J31_RS10855
A6J31_RS10880	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS10910	SM00448	cheY-homologous receiver domain
A6J31_RS10910	SM00862	Transcriptional regulatory protein, C terminal
A6J31_RS10915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J31_RS10915	SM00387	Histidine kinase-like ATPases
A6J31_RS10915	SM00388	His Kinase A (phosphoacceptor) domain
A6J31_RS11025	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J31_RS11025	SM00322	K homology RNA-binding domain
A6J31_RS11070	SM00831	Cation transporter/ATPase, N-terminus
A6J31_RS11085	SM00640	Glycosyl hydrolases family 32
A6J31_RS11135	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS11140	SM00382	ATPases associated with a variety of cellular activities
A6J31_RS11145	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J31_RS11160	SM00487	DEAD-like helicases superfamily
A6J31_RS11160	SM00490	helicase superfamily c-terminal domain
A6J31_RS11225	SM01131	A6J31_RS11225
A6J31_RS11270	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J31_RS11290	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6J31_RS11295	SM00822	A6J31_RS11295
A6J31_RS11300	SM00825	Beta-ketoacyl synthase
A6J31_RS11315	SM00878	Biotin carboxylase C-terminal domain
A6J31_RS11335	SM00322	K homology RNA-binding domain
A6J31_RS11335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J31_RS11340	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J31_RS11340	SM01134	A6J31_RS11340
A6J31_RS11375	SM00981	A6J31_RS11375
