A6J68_RS00015	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS00020	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS00025	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS00065	SM00422	helix_turn_helix, mercury resistance
A6J68_RS00165	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS00175	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS00190	SM00014	Acid phosphatase homologues
A6J68_RS00210	SM00450	Rhodanese Homology Domain
A6J68_RS00275	SM00387	Histidine kinase-like ATPases
A6J68_RS00275	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS00315	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6J68_RS00315	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J68_RS00355	SM01133	A6J68_RS00355
A6J68_RS00370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J68_RS00385	SM00883	Chaperonin 10 Kd subunit
A6J68_RS00390	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS00455	SM00732	Likely ribonuclease with RNase H fold.
A6J68_RS00470	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS00475	SM00852	Probable molybdopterin binding domain
A6J68_RS00485	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J68_RS00495	SM00853	MutL C terminal dimerisation domain
A6J68_RS00495	SM01340	A6J68_RS00495
A6J68_RS00505	SM00357	Cold shock protein domain
A6J68_RS00510	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J68_RS00510	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J68_RS00520	SM00836	DALR anticodon binding domain
A6J68_RS00520	SM01016	Arginyl tRNA synthetase N terminal dom
A6J68_RS00570	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6J68_RS00645	SM00448	cheY-homologous receiver domain
A6J68_RS00645	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS00650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J68_RS00650	SM00387	Histidine kinase-like ATPases
A6J68_RS00650	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS00670	SM00387	Histidine kinase-like ATPases
A6J68_RS00675	SM00448	cheY-homologous receiver domain
A6J68_RS00680	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS00755	SM00885	D5 N terminal like
A6J68_RS00760	SM00942	Primase C terminal 1 (PriCT-1)
A6J68_RS00790	SM01040	BRO family, N-terminal domain
A6J68_RS00795	SM01040	BRO family, N-terminal domain
A6J68_RS00815	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS00830	SM00363	S4 RNA-binding domain
A6J68_RS00830	SM01390	A6J68_RS00830
A6J68_RS00855	SM01228	A6J68_RS00855
A6J68_RS00895	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS00900	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS00935	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS00940	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J68_RS00940	SM01240	A6J68_RS00940
A6J68_RS00950	SM00419	helix_turn_helix, cAMP Regulatory protein
A6J68_RS00955	SM00873	B3/4 domain
A6J68_RS01000	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01030	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6J68_RS01035	SM00470	ParB-like nuclease domain
A6J68_RS01040	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01040	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6J68_RS01045	SM00480	DNA polymerase III beta subunit
A6J68_RS01050	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J68_RS01075	SM00487	DEAD-like helicases superfamily
A6J68_RS01075	SM00490	helicase superfamily c-terminal domain
A6J68_RS01075	SM00982	A6J68_RS01075
A6J68_RS01075	SM01058	CarD-like/TRCF domain
A6J68_RS01085	SM00363	S4 RNA-binding domain
A6J68_RS01105	SM00977	TilS substrate C-terminal domain
A6J68_RS01115	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01295	SM01400	A6J68_RS01295
A6J68_RS01330	SM01211	A6J68_RS01330
A6J68_RS01355	SM00798	AICARFT/IMPCHase bienzyme
A6J68_RS01355	SM00851	MGS-like domain
A6J68_RS01365	SM00257	Lysin motif
A6J68_RS01400	SM01130	A6J68_RS01400
A6J68_RS01420	SM01209	A6J68_RS01420
A6J68_RS01420	SM01210	A6J68_RS01420
A6J68_RS01425	SM01001	AIR carboxylase
A6J68_RS01435	SM00974	A6J68_RS01435
A6J68_RS01445	SM00998	Adenylosuccinate lyase C-terminus
A6J68_RS01450	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS01455	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01460	SM00226	Low molecular weight phosphatase family
A6J68_RS01465	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
A6J68_RS01480	SM00829	Enoylreductase
A6J68_RS01495	SM01403	A6J68_RS01495
A6J68_RS01515	SM01382	A6J68_RS01515
A6J68_RS01515	SM01383	A6J68_RS01515
A6J68_RS01530	SM00322	K homology RNA-binding domain
A6J68_RS01550	SM01374	A6J68_RS01550
A6J68_RS01555	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J68_RS01610	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J68_RS01630	SM00662	RNA polymerases D
A6J68_RS01760	SM00855	Phosphoglycerate mutase family
A6J68_RS01770	SM00047	Lysozyme subfamily 2
A6J68_RS01790	SM00271	DnaJ molecular chaperone homology domain
A6J68_RS01795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J68_RS01855	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01860	SM00947	Carbonic anhydrase
A6J68_RS01890	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01905	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS01920	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01925	SM00448	cheY-homologous receiver domain
A6J68_RS01925	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS01930	SM00387	Histidine kinase-like ATPases
A6J68_RS01930	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS01965	SM01120	A6J68_RS01965
A6J68_RS01965	SM01121	A6J68_RS01965
A6J68_RS01970	SM00244	prohibitin homologues
A6J68_RS01985	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS01990	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS02015	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02045	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6J68_RS02065	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02070	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02110	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J68_RS02115	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02130	SM00363	S4 RNA-binding domain
A6J68_RS02145	SM00663	RNA polymerase I subunit A N-terminus
A6J68_RS02190	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS02255	SM00387	Histidine kinase-like ATPases
A6J68_RS02260	SM00448	cheY-homologous receiver domain
A6J68_RS02260	SM00850	LytTr DNA-binding domain
A6J68_RS02295	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02300	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02310	SM00642	Alpha-amylase domain
A6J68_RS02335	SM00861	Transketolase, pyrimidine binding domain
A6J68_RS02345	SM01387	A6J68_RS02345
A6J68_RS02350	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J68_RS02350	SM00322	K homology RNA-binding domain
A6J68_RS02370	SM00840	A6J68_RS02370
A6J68_RS02380	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J68_RS02420	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS02460	SM00487	DEAD-like helicases superfamily
A6J68_RS02530	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS02540	SM00838	Elongation factor G C-terminus
A6J68_RS02540	SM00889	Elongation factor G, domain IV
A6J68_RS02585	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS02675	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J68_RS02675	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02825	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02905	SM00861	Transketolase, pyrimidine binding domain
A6J68_RS02915	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS02950	SM00740	A6J68_RS02950
A6J68_RS02960	SM00487	DEAD-like helicases superfamily
A6J68_RS02960	SM00490	helicase superfamily c-terminal domain
A6J68_RS02965	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS02975	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS03035	SM00981	A6J68_RS03035
A6J68_RS03050	SM00322	K homology RNA-binding domain
A6J68_RS03050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J68_RS03060	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS03075	SM00421	helix_turn_helix, Lux Regulon
A6J68_RS03075	SM00448	cheY-homologous receiver domain
A6J68_RS03085	SM00072	Guanylate kinase homologues.
A6J68_RS03090	SM01409	A6J68_RS03090
A6J68_RS03095	SM00487	DEAD-like helicases superfamily
A6J68_RS03095	SM00490	helicase superfamily c-terminal domain
A6J68_RS03110	SM00331	Sigma factor PP2C-like phosphatases
A6J68_RS03110	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6J68_RS03115	SM00220	Serine/Threonine protein kinases, catalytic domain
A6J68_RS03115	SM00740	A6J68_RS03115
A6J68_RS03130	SM00421	helix_turn_helix, Lux Regulon
A6J68_RS03130	SM00448	cheY-homologous receiver domain
A6J68_RS03140	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J68_RS03150	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J68_RS03150	SM01134	A6J68_RS03150
A6J68_RS03200	SM00487	DEAD-like helicases superfamily
A6J68_RS03200	SM00490	helicase superfamily c-terminal domain
A6J68_RS03260	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J68_RS03280	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6J68_RS03285	SM00822	A6J68_RS03285
A6J68_RS03290	SM00825	Beta-ketoacyl synthase
A6J68_RS03305	SM00878	Biotin carboxylase C-terminal domain
A6J68_RS03415	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS03445	SM00322	K homology RNA-binding domain
A6J68_RS03500	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6J68_RS03500	SM00474	3'-5' exonuclease
A6J68_RS03500	SM00475	5'-3' exonuclease
A6J68_RS03500	SM00482	DNA polymerase A domain
A6J68_RS03505	SM00881	CoA binding domain
A6J68_RS03520	SM00448	cheY-homologous receiver domain
A6J68_RS03520	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS03525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J68_RS03525	SM00387	Histidine kinase-like ATPases
A6J68_RS03525	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS03550	SM00849	Metallo-beta-lactamase superfamily
A6J68_RS03605	SM00393	Putative single-stranded nucleic acids-binding domain
A6J68_RS03605	SM01245	A6J68_RS03605
A6J68_RS03735	SM00871	Bacterial transcription activator, effector binding domain
A6J68_RS03755	SM00422	helix_turn_helix, mercury resistance
A6J68_RS03780	SM00342	helix_turn_helix, arabinose operon control protein
A6J68_RS03865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J68_RS03865	SM00487	DEAD-like helicases superfamily
A6J68_RS03935	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS03940	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS03955	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J68_RS03955	SM00876	Biotin and Thiamin Synthesis associated domain
A6J68_RS03975	SM00478	endonuclease III
A6J68_RS03995	SM00450	Rhodanese Homology Domain
A6J68_RS04000	SM00838	Elongation factor G C-terminus
A6J68_RS04025	SM00842	Cell division protein FtsA
A6J68_RS04030	SM00864	Tubulin/FtsZ family, GTPase domain
A6J68_RS04030	SM00865	Tubulin/FtsZ family, C-terminal domain
A6J68_RS04050	SM00363	S4 RNA-binding domain
A6J68_RS04075	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS04075	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J68_RS04095	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS04130	SM00363	S4 RNA-binding domain
A6J68_RS04160	SM00411	bacterial (prokaryotic) histone like domain
A6J68_RS04180	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS04235	SM00487	DEAD-like helicases superfamily
A6J68_RS04235	SM00490	helicase superfamily c-terminal domain
A6J68_RS04450	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J68_RS04460	SM00831	Cation transporter/ATPase, N-terminus
A6J68_RS04485	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS04510	SM00849	Metallo-beta-lactamase superfamily
A6J68_RS04520	SM00479	A6J68_RS04520
A6J68_RS04520	SM00491	A6J68_RS04520
A6J68_RS04600	SM00830	Chorismate mutase type II
A6J68_RS04660	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS04670	SM00448	cheY-homologous receiver domain
A6J68_RS04670	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS04705	SM00387	Histidine kinase-like ATPases
A6J68_RS04705	SM00433	TopoisomeraseII
A6J68_RS04730	SM01192	A6J68_RS04730
A6J68_RS04730	SM01193	A6J68_RS04730
A6J68_RS04735	SM00892	DNA/RNA non-specific endonuclease
A6J68_RS04805	SM00342	helix_turn_helix, arabinose operon control protein
A6J68_RS04830	SM00327	von Willebrand factor (vWF) type A domain
A6J68_RS04910	SM00822	A6J68_RS04910
A6J68_RS04925	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS04945	SM00825	Beta-ketoacyl synthase
A6J68_RS05025	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05035	SM00892	DNA/RNA non-specific endonuclease
A6J68_RS05045	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J68_RS05090	SM00895	A6J68_RS05090
A6J68_RS05135	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS05140	SM00642	Alpha-amylase domain
A6J68_RS05155	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J68_RS05160	SM00448	cheY-homologous receiver domain
A6J68_RS05160	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS05185	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS05190	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05195	SM00448	cheY-homologous receiver domain
A6J68_RS05195	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS05200	SM00091	PAS domain
A6J68_RS05200	SM00387	Histidine kinase-like ATPases
A6J68_RS05200	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS05205	SM00849	Metallo-beta-lactamase superfamily
A6J68_RS05215	SM00358	Double-stranded RNA binding motif
A6J68_RS05215	SM00535	Ribonuclease III family
A6J68_RS05220	SM00968	SMC proteins Flexible Hinge Domain
A6J68_RS05235	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05235	SM00962	SRP54-type protein, GTPase domain
A6J68_RS05235	SM00963	SRP54-type protein, helical bundle domain
A6J68_RS05265	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J68_RS05265	SM00732	Likely ribonuclease with RNase H fold.
A6J68_RS05270	SM00731	SprT homologues.
A6J68_RS05365	SM00855	Phosphoglycerate mutase family
A6J68_RS05420	SM00855	Phosphoglycerate mutase family
A6J68_RS05430	SM00493	A6J68_RS05430
A6J68_RS05470	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05485	SM00487	DEAD-like helicases superfamily
A6J68_RS05485	SM00490	helicase superfamily c-terminal domain
A6J68_RS05500	SM00563	Phosphate acyltransferases
A6J68_RS05505	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J68_RS05510	SM00849	Metallo-beta-lactamase superfamily
A6J68_RS05520	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS05545	SM01061	CAT RNA binding domain
A6J68_RS05580	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J68_RS05605	SM00363	S4 RNA-binding domain
A6J68_RS05650	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J68_RS05675	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS05735	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05755	SM00885	D5 N terminal like
A6J68_RS05765	SM00857	Resolvase, N terminal domain
A6J68_RS05780	SM00487	DEAD-like helicases superfamily
A6J68_RS05780	SM00490	helicase superfamily c-terminal domain
A6J68_RS05795	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05840	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05880	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J68_RS05905	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J68_RS05905	SM00292	breast cancer carboxy-terminal domain
A6J68_RS05905	SM00532	Ligase N family
A6J68_RS05910	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J68_RS05915	SM00642	Alpha-amylase domain
A6J68_RS05920	SM00642	Alpha-amylase domain
A6J68_RS05970	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS05995	SM00892	DNA/RNA non-specific endonuclease
A6J68_RS06010	SM00873	B3/4 domain
A6J68_RS06010	SM00874	tRNA synthetase B5 domain
A6J68_RS06010	SM00896	Ferredoxin-fold anticodon binding domain
A6J68_RS06040	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06050	SM00861	Transketolase, pyrimidine binding domain
A6J68_RS06115	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J68_RS06155	SM00562	A6J68_RS06155
A6J68_RS06160	SM00838	Elongation factor G C-terminus
A6J68_RS06165	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A6J68_RS06170	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J68_RS06185	SM00831	Cation transporter/ATPase, N-terminus
A6J68_RS06215	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J68_RS06225	SM00481	DNA polymerase alpha chain like domain
A6J68_RS06265	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06270	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS06300	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06325	SM00434	DNA Topoisomerase IV
A6J68_RS06355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J68_RS06355	SM00866	A6J68_RS06355
A6J68_RS06380	SM00245	tail specific protease
A6J68_RS06385	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06395	SM00448	cheY-homologous receiver domain
A6J68_RS06395	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS06400	SM00387	Histidine kinase-like ATPases
A6J68_RS06425	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06425	SM00962	SRP54-type protein, GTPase domain
A6J68_RS06425	SM00963	SRP54-type protein, helical bundle domain
A6J68_RS06435	SM00387	Histidine kinase-like ATPases
A6J68_RS06435	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS06440	SM00448	cheY-homologous receiver domain
A6J68_RS06440	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS06455	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06460	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06500	SM00904	Riboflavin kinase
A6J68_RS06535	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06540	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J68_RS06540	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J68_RS06540	SM00493	A6J68_RS06540
A6J68_RS06555	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06570	SM01266	A6J68_RS06570
A6J68_RS06595	SM00448	cheY-homologous receiver domain
A6J68_RS06595	SM00850	LytTr DNA-binding domain
A6J68_RS06600	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6J68_RS06695	SM00851	MGS-like domain
A6J68_RS06695	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6J68_RS06695	SM01209	A6J68_RS06695
A6J68_RS06700	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6J68_RS06720	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J68_RS06730	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06740	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6J68_RS06755	SM00155	Phospholipase D. Active site motifs.
A6J68_RS06775	SM00506	Appr-1"-p processing enzyme
A6J68_RS06825	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06830	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS06860	SM00937	A6J68_RS06860
A6J68_RS06910	SM01240	A6J68_RS06910
A6J68_RS06950	SM00954	Region found in RelA / SpoT proteins
A6J68_RS06955	SM01118	A6J68_RS06955
A6J68_RS06960	SM01400	A6J68_RS06960
A6J68_RS06975	SM00881	CoA binding domain
A6J68_RS07005	SM00857	Resolvase, N terminal domain
A6J68_RS07010	SM00857	Resolvase, N terminal domain
A6J68_RS07020	SM00257	Lysin motif
A6J68_RS07020	SM00646	A6J68_RS07020
A6J68_RS07135	SM00470	ParB-like nuclease domain
A6J68_RS07145	SM00507	HNH nucleases
A6J68_RS07165	SM00487	DEAD-like helicases superfamily
A6J68_RS07170	SM00990	A6J68_RS07170
A6J68_RS07175	SM00885	D5 N terminal like
A6J68_RS07175	SM00942	Primase C terminal 1 (PriCT-1)
A6J68_RS07195	SM00482	DNA polymerase A domain
A6J68_RS07260	SM00342	helix_turn_helix, arabinose operon control protein
A6J68_RS07290	SM00342	helix_turn_helix, arabinose operon control protein
A6J68_RS07315	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS07330	SM00905	Dihydroneopterin aldolase
A6J68_RS07400	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS07425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J68_RS07510	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J68_RS07535	SM00434	DNA Topoisomerase IV
A6J68_RS07540	SM00387	Histidine kinase-like ATPases
A6J68_RS07540	SM00433	TopoisomeraseII
A6J68_RS07545	SM01207	A6J68_RS07545
A6J68_RS07550	SM00986	Uracil DNA glycosylase superfamily
A6J68_RS07550	SM00987	UreE urease accessory protein, C-terminal domain 
A6J68_RS07575	SM00858	A6J68_RS07575
A6J68_RS07700	SM00849	Metallo-beta-lactamase superfamily
A6J68_RS07705	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS07735	SM00028	Tetratricopeptide repeats
A6J68_RS07800	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
A6J68_RS07850	SM00642	Alpha-amylase domain
A6J68_RS07860	SM00986	Uracil DNA glycosylase superfamily
A6J68_RS07860	SM00987	UreE urease accessory protein, C-terminal domain 
A6J68_RS07890	SM00465	GIY-YIG type nucleases (URI domain)
A6J68_RS08005	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08045	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08045	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J68_RS08090	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08090	SM00994	ClpX C4-type zinc finger
A6J68_RS08090	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J68_RS08130	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J68_RS08165	SM00387	Histidine kinase-like ATPases
A6J68_RS08165	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS08170	SM00448	cheY-homologous receiver domain
A6J68_RS08170	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS08175	SM00954	Region found in RelA / SpoT proteins
A6J68_RS08180	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08185	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08190	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J68_RS08205	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A6J68_RS08215	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08220	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08230	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08270	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J68_RS08270	SM01134	A6J68_RS08270
A6J68_RS08280	SM00287	Bacterial SH3 domain homologues
A6J68_RS08340	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08350	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6J68_RS08355	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6J68_RS08365	SM00363	S4 RNA-binding domain
A6J68_RS08395	SM00854	Bacterial capsule synthesis protein PGA_cap
A6J68_RS08400	SM00981	A6J68_RS08400
A6J68_RS08440	SM00957	SecA DEAD-like domain
A6J68_RS08440	SM00958	SecA preprotein cross-linking domain
A6J68_RS08520	SM00257	Lysin motif
A6J68_RS08550	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08575	SM01131	A6J68_RS08575
A6J68_RS08585	SM01091	Transporter associated domain
A6J68_RS08600	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J68_RS08605	SM00014	Acid phosphatase homologues
A6J68_RS08735	SM00400	zinc finger
A6J68_RS08735	SM00493	A6J68_RS08735
A6J68_RS08765	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS08765	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J68_RS08780	SM00450	Rhodanese Homology Domain
A6J68_RS08810	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS08860	SM00487	DEAD-like helicases superfamily
A6J68_RS08860	SM00490	helicase superfamily c-terminal domain
A6J68_RS08870	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS08870	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J68_RS08875	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08920	SM00363	S4 RNA-binding domain
A6J68_RS08955	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J68_RS08955	SM00955	A6J68_RS08955
A6J68_RS08980	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS08990	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6J68_RS08990	SM01232	A6J68_RS08990
A6J68_RS08995	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS09000	SM00460	Transglutaminase/protease-like homologues
A6J68_RS09125	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09150	SM00649	Ribosomal protein L11/L12
A6J68_RS09195	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09195	SM00843	A6J68_RS09195
A6J68_RS09210	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09220	SM00529	Helix-turn-helix diphteria tox regulatory element
A6J68_RS09220	SM00899	A6J68_RS09220
A6J68_RS09265	SM01022	A6J68_RS09265
A6J68_RS09430	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J68_RS09435	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09440	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09500	SM01234	A6J68_RS09500
A6J68_RS09505	SM00363	S4 RNA-binding domain
A6J68_RS09570	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J68_RS09590	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS09630	SM00487	DEAD-like helicases superfamily
A6J68_RS09630	SM00490	helicase superfamily c-terminal domain
A6J68_RS09655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J68_RS09655	SM00387	Histidine kinase-like ATPases
A6J68_RS09655	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS09660	SM00448	cheY-homologous receiver domain
A6J68_RS09660	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS09700	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09720	SM00829	Enoylreductase
A6J68_RS09730	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS09730	SM00930	A6J68_RS09730
A6J68_RS09745	SM00062	Bacterial periplasmic substrate-binding proteins
A6J68_RS09815	SM01120	A6J68_RS09815
A6J68_RS09865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J68_RS09875	SM01103	A6J68_RS09875
A6J68_RS09895	SM00845	GatB domain
A6J68_RS09920	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J68_RS09955	SM00870	A6J68_RS09955
A6J68_RS09970	SM00487	DEAD-like helicases superfamily
A6J68_RS09970	SM00490	helicase superfamily c-terminal domain
A6J68_RS09980	SM01005	Alanine racemase, C-terminal domain
A6J68_RS09995	SM00957	SecA DEAD-like domain
A6J68_RS09995	SM00958	SecA preprotein cross-linking domain
A6J68_RS10015	SM00640	Glycosyl hydrolases family 32
A6J68_RS10020	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS10035	SM00841	Elongation factor P, C-terminal
A6J68_RS10035	SM01185	A6J68_RS10035
A6J68_RS10110	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10140	SM00478	endonuclease III
A6J68_RS10145	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS10155	SM00014	Acid phosphatase homologues
A6J68_RS10160	SM00463	Small MutS-related domain
A6J68_RS10160	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J68_RS10160	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J68_RS10185	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10240	SM00419	helix_turn_helix, cAMP Regulatory protein
A6J68_RS10245	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A6J68_RS10245	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
A6J68_RS10260	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10265	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10320	SM00479	A6J68_RS10320
A6J68_RS10375	SM00849	Metallo-beta-lactamase superfamily
A6J68_RS10385	SM01230	A6J68_RS10385
A6J68_RS10390	SM00422	helix_turn_helix, mercury resistance
A6J68_RS10410	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6J68_RS10415	SM00838	Elongation factor G C-terminus
A6J68_RS10415	SM00889	Elongation factor G, domain IV
A6J68_RS10450	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A6J68_RS10470	SM00650	Ribosomal RNA adenine dimethylases
A6J68_RS10480	SM00493	A6J68_RS10480
A6J68_RS10535	SM00387	Histidine kinase-like ATPases
A6J68_RS10535	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS10540	SM00448	cheY-homologous receiver domain
A6J68_RS10540	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS10565	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10620	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS10630	SM01007	Class II Aldolase and Adducin N-terminal domain
A6J68_RS10640	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J68_RS10670	SM00788	Adenylosuccinate synthetase
A6J68_RS10720	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10720	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J68_RS10795	SM00100	Cyclic nucleotide-monophosphate binding domain
A6J68_RS10805	SM00354	helix_turn _helix lactose operon repressor
A6J68_RS10875	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J68_RS10880	SM00479	A6J68_RS10880
A6J68_RS10880	SM00481	DNA polymerase alpha chain like domain
A6J68_RS10885	SM00047	Lysozyme subfamily 2
A6J68_RS10910	SM01323	A6J68_RS10910
A6J68_RS10925	SM00919	Malic enzyme, NAD binding domain
A6J68_RS10925	SM01274	A6J68_RS10925
A6J68_RS10940	SM00448	cheY-homologous receiver domain
A6J68_RS10950	SM00642	Alpha-amylase domain
A6J68_RS10955	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS10970	SM01133	A6J68_RS10970
A6J68_RS11020	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J68_RS11020	SM01134	A6J68_RS11020
A6J68_RS11040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J68_RS11040	SM00954	Region found in RelA / SpoT proteins
A6J68_RS11070	SM00342	helix_turn_helix, arabinose operon control protein
A6J68_RS11070	SM00448	cheY-homologous receiver domain
A6J68_RS11115	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS11135	SM00448	cheY-homologous receiver domain
A6J68_RS11135	SM00850	LytTr DNA-binding domain
A6J68_RS11155	SM00387	Histidine kinase-like ATPases
A6J68_RS11155	SM00388	His Kinase A (phosphoacceptor) domain
A6J68_RS11160	SM00448	cheY-homologous receiver domain
A6J68_RS11160	SM00862	Transcriptional regulatory protein, C terminal
A6J68_RS11170	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS11210	SM00422	helix_turn_helix, mercury resistance
A6J68_RS11240	SM00382	ATPases associated with a variety of cellular activities
A6J68_RS11350	SM00530	Helix-turn-helix XRE-family like proteins 
A6J68_RS11360	SM00530	Helix-turn-helix XRE-family like proteins 
