locus-tag class description SSU16085_RS00005 PF00308 Bacterial dnaA protein SSU16085_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SSU16085_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SSU16085_RS00010 PF02767 DNA polymerase III beta subunit, central domain SSU16085_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SSU16085_RS00025 PF01381 Helix-turn-helix SSU16085_RS00030 PF06071 Protein of unknown function (DUF933) SSU16085_RS00030 PF01926 50S ribosome-binding GTPase SSU16085_RS00035 PF01195 Peptidyl-tRNA hydrolase SSU16085_RS00040 PF03461 TRCF domain SSU16085_RS00040 PF17757 UvrB interaction domain SSU16085_RS00040 PF02559 CarD-like/TRCF domain SSU16085_RS00040 PF00270 DEAD/DEAH box helicase SSU16085_RS00040 PF00271 Helicase conserved C-terminal domain SSU16085_RS00045 PF01479 S4 domain SSU16085_RS00060 PF01171 PP-loop family SSU16085_RS00065 PF00156 Phosphoribosyl transferase domain SSU16085_RS00070 PF00004 ATPase family associated with various cellular activities (AAA) SSU16085_RS00070 PF17862 AAA+ lid domain SSU16085_RS00070 PF06480 FtsH Extracellular SSU16085_RS00070 PF01434 Peptidase family M41 SSU16085_RS00180 PF04085 rod shape-determining protein MreC SSU16085_RS00195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSU16085_RS00195 PF14572 Phosphoribosyl synthetase-associated domain SSU16085_RS00200 PF01610 Transposase SSU16085_RS00200 PF13683 Integrase core domain SSU16085_RS00205 PF00155 Aminotransferase class I and II SSU16085_RS00210 PF11967 Recombination protein O N terminal SSU16085_RS00210 PF02565 Recombination protein O C terminal SSU16085_RS00215 PF02504 Fatty acid synthesis protein SSU16085_RS00220 PF00550 Phosphopantetheine attachment site SSU16085_RS00230 PF01259 SAICAR synthetase SSU16085_RS00235 PF02769 AIR synthase related protein, C-terminal domain SSU16085_RS00235 PF00586 AIR synthase related protein, N-terminal domain SSU16085_RS00235 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SSU16085_RS00240 PF00156 Phosphoribosyl transferase domain SSU16085_RS00240 PF13537 Glutamine amidotransferase domain SSU16085_RS00245 PF00586 AIR synthase related protein, N-terminal domain SSU16085_RS00245 PF02769 AIR synthase related protein, C-terminal domain SSU16085_RS00250 PF00551 Formyl transferase SSU16085_RS00255 PF02142 MGS-like domain SSU16085_RS00255 PF01808 AICARFT/IMPCHase bienzyme SSU16085_RS00260 PF02086 D12 class N6 adenine-specific DNA methyltransferase SSU16085_RS00265 PF01555 DNA methylase SSU16085_RS00270 PF04556 DpnII restriction endonuclease SSU16085_RS00275 PF04556 DpnII restriction endonuclease SSU16085_RS00280 PF02844 Phosphoribosylglycinamide synthetase, N domain SSU16085_RS00280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSU16085_RS00280 PF02843 Phosphoribosylglycinamide synthetase, C domain SSU16085_RS00285 PF00731 AIR carboxylase SSU16085_RS00290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SSU16085_RS00290 PF02222 ATP-grasp domain SSU16085_RS00300 PF10397 Adenylosuccinate lyase C-terminus SSU16085_RS00300 PF00206 Lyase SSU16085_RS00305 PF00005 ABC transporter SSU16085_RS00330 PF00005 ABC transporter SSU16085_RS00340 PF00005 ABC transporter SSU16085_RS00340 PF00664 ABC transporter transmembrane region SSU16085_RS00350 PF17864 RuvB AAA lid domain SSU16085_RS00350 PF05491 RuvB C-terminal winged helix domain SSU16085_RS00350 PF05496 Holliday junction DNA helicase RuvB P-loop domain SSU16085_RS00375 PF02875 Mur ligase family, glutamate ligase domain SSU16085_RS00375 PF08245 Mur ligase middle domain SSU16085_RS00385 PF01119 DNA mismatch repair protein, C-terminal domain SSU16085_RS00385 PF08676 MutL C terminal dimerisation domain SSU16085_RS00390 PF07499 RuvA, C-terminal domain SSU16085_RS00390 PF01330 RuvA N terminal domain SSU16085_RS00395 PF00117 Glutamine amidotransferase class-I SSU16085_RS00395 PF13673 Acetyltransferase (GNAT) domain SSU16085_RS00395 PF13302 Acetyltransferase (GNAT) domain SSU16085_RS00395 PF00958 GMP synthase C terminal domain SSU16085_RS00395 PF03352 Methyladenine glycosylase SSU16085_RS00400 PF00994 Probable molybdopterin binding domain SSU16085_RS00400 PF02464 Competence-damaged protein SSU16085_RS00400 PF18146 Damage-inducible protein CinA KH domain SSU16085_RS00405 PF00154 recA bacterial DNA recombination protein SSU16085_RS00410 PF03960 ArsC family SSU16085_RS00415 PF06135 IreB regulatory phosphoprotein SSU16085_RS00420 PF03652 Holliday junction resolvase SSU16085_RS00425 PF06949 Protein of unknown function (DUF1292) SSU16085_RS00430 PF00338 Ribosomal protein S10p/S20e SSU16085_RS00435 PF00297 Ribosomal protein L3 SSU16085_RS00440 PF00573 Ribosomal protein L4/L1 family SSU16085_RS00445 PF00276 Ribosomal protein L23 SSU16085_RS00450 PF00181 Ribosomal Proteins L2, RNA binding domain SSU16085_RS00450 PF03947 Ribosomal Proteins L2, C-terminal domain SSU16085_RS00455 PF00203 Ribosomal protein S19 SSU16085_RS00460 PF00237 Ribosomal protein L22p/L17e SSU16085_RS00465 PF07650 KH domain SSU16085_RS00465 PF00189 Ribosomal protein S3, C-terminal domain SSU16085_RS00470 PF00252 Ribosomal protein L16p/L10e SSU16085_RS00475 PF00831 Ribosomal L29 protein SSU16085_RS00480 PF00366 Ribosomal protein S17 SSU16085_RS00485 PF00238 Ribosomal protein L14p/L23e SSU16085_RS00490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SSU16085_RS00490 PF00467 KOW motif SSU16085_RS00495 PF00281 Ribosomal protein L5 SSU16085_RS00495 PF00673 ribosomal L5P family C-terminus SSU16085_RS00500 PF00253 Ribosomal protein S14p/S29e SSU16085_RS00505 PF00410 Ribosomal protein S8 SSU16085_RS00510 PF00347 Ribosomal protein L6 SSU16085_RS00515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SSU16085_RS00520 PF00333 Ribosomal protein S5, N-terminal domain SSU16085_RS00520 PF03719 Ribosomal protein S5, C-terminal domain SSU16085_RS00525 PF00327 Ribosomal protein L30p/L7e SSU16085_RS00530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SSU16085_RS00535 PF00344 SecY translocase SSU16085_RS00545 PF01176 Translation initiation factor 1A / IF-1 SSU16085_RS00550 PF00444 Ribosomal protein L36 SSU16085_RS00555 PF00416 Ribosomal protein S13/S18 SSU16085_RS00560 PF00411 Ribosomal protein S11 SSU16085_RS00565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SSU16085_RS00565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SSU16085_RS00565 PF01000 RNA polymerase Rpb3/RpoA insert domain SSU16085_RS00570 PF01196 Ribosomal protein L17 SSU16085_RS00575 PF13683 Integrase core domain SSU16085_RS00575 PF01610 Transposase SSU16085_RS00670 PF00589 Phage integrase family SSU16085_RS00670 PF14659 Phage integrase, N-terminal SAM-like domain SSU16085_RS00680 PF18106 Rolling Circle replication initiation protein N-terminal domain SSU16085_RS00680 PF02486 Replication initiation factor SSU16085_RS00720 PF01047 MarR family SSU16085_RS00725 PF00005 ABC transporter SSU16085_RS00730 PF00950 ABC 3 transport family SSU16085_RS00735 PF01297 Zinc-uptake complex component A periplasmic SSU16085_RS00735 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SSU16085_RS00740 PF03965 Penicillinase repressor SSU16085_RS00755 PF06736 Protein of unknown function (DUF1211) SSU16085_RS00760 PF00579 tRNA synthetases class I (W and Y) SSU16085_RS00760 PF01479 S4 domain SSU16085_RS00765 PF00912 Transglycosylase SSU16085_RS00765 PF00905 Penicillin binding protein transpeptidase domain SSU16085_RS00770 PF04563 RNA polymerase beta subunit SSU16085_RS00770 PF04561 RNA polymerase Rpb2, domain 2 SSU16085_RS00770 PF04560 RNA polymerase Rpb2, domain 7 SSU16085_RS00770 PF04565 RNA polymerase Rpb2, domain 3 SSU16085_RS00770 PF10385 RNA polymerase beta subunit external 1 domain SSU16085_RS00770 PF00562 RNA polymerase Rpb2, domain 6 SSU16085_RS00775 PF04997 RNA polymerase Rpb1, domain 1 SSU16085_RS00775 PF00623 RNA polymerase Rpb1, domain 2 SSU16085_RS00775 PF04983 RNA polymerase Rpb1, domain 3 SSU16085_RS00775 PF05000 RNA polymerase Rpb1, domain 4 SSU16085_RS00775 PF04998 RNA polymerase Rpb1, domain 5 SSU16085_RS00785 PF02016 LD-carboxypeptidase N-terminal domain SSU16085_RS00785 PF17676 LD-carboxypeptidase C-terminal domain SSU16085_RS00790 PF00437 Type II/IV secretion system protein SSU16085_RS00795 PF00482 Type II secretion system (T2SS), protein F SSU16085_RS00800 PF07963 Prokaryotic N-terminal methylation motif SSU16085_RS00830 PF00871 Acetokinase family SSU16085_RS00835 PF07155 ECF-type riboflavin transporter, S component SSU16085_RS00840 PF02875 Mur ligase family, glutamate ligase domain SSU16085_RS00840 PF08245 Mur ligase middle domain SSU16085_RS00845 PF05343 M42 glutamyl aminopeptidase SSU16085_RS00855 PF00085 Thioredoxin SSU16085_RS00865 PF01588 Putative tRNA binding domain SSU16085_RS00865 PF14794 Domain of unknown function (DUF4479) SSU16085_RS00875 PF00436 Single-strand binding protein family SSU16085_RS00885 PF00166 Chaperonin 10 Kd subunit SSU16085_RS00890 PF00118 TCP-1/cpn60 chaperonin family SSU16085_RS00895 PF00164 Ribosomal protein S12/S23 SSU16085_RS00900 PF00177 Ribosomal protein S7p/S5e SSU16085_RS00905 PF03764 Elongation factor G, domain IV SSU16085_RS00905 PF03144 Elongation factor Tu domain 2 SSU16085_RS00905 PF14492 Elongation Factor G, domain II SSU16085_RS00905 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS00905 PF00679 Elongation factor G C-terminus SSU16085_RS00910 PF01431 Peptidase family M13 SSU16085_RS00910 PF05649 Peptidase family M13 SSU16085_RS00915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SSU16085_RS00915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SSU16085_RS00920 PF00162 Phosphoglycerate kinase SSU16085_RS00930 PF13411 MerR HTH family regulatory protein SSU16085_RS00935 PF03951 Glutamine synthetase, beta-Grasp domain SSU16085_RS00935 PF00120 Glutamine synthetase, catalytic domain SSU16085_RS00940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SSU16085_RS00940 PF17770 Ribonuclease J C-terminal domain SSU16085_RS00940 PF00753 Metallo-beta-lactamase superfamily SSU16085_RS00945 PF07288 Protein of unknown function (DUF1447) SSU16085_RS00955 PF00814 Glycoprotease family SSU16085_RS00965 PF00814 Glycoprotease family SSU16085_RS00970 PF02311 AraC-like ligand binding domain SSU16085_RS00970 PF12833 Helix-turn-helix domain SSU16085_RS00975 PF01547 Bacterial extracellular solute-binding protein SSU16085_RS00980 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS00985 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS00990 PF16875 Glycosyl hydrolase family 36 N-terminal domain SSU16085_RS00990 PF16874 Glycosyl hydrolase family 36 C-terminal domain SSU16085_RS01005 PF03601 Conserved hypothetical protein 698 SSU16085_RS01025 PF00005 ABC transporter SSU16085_RS01025 PF13732 Domain of unknown function (DUF4162) SSU16085_RS01035 PF00232 Glycosyl hydrolase family 1 SSU16085_RS01040 PF04394 Protein of unknown function, DUF536 SSU16085_RS01040 PF08279 HTH domain SSU16085_RS01045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU16085_RS01050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU16085_RS01055 PF03611 PTS system sugar-specific permease component SSU16085_RS01060 PF00456 Transketolase, thiamine diphosphate binding domain SSU16085_RS01065 PF02780 Transketolase, C-terminal domain SSU16085_RS01065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SSU16085_RS01065 PF02779 Transketolase, pyrimidine binding domain SSU16085_RS01070 PF03009 Glycerophosphoryl diester phosphodiesterase family SSU16085_RS01075 PF02575 YbaB/EbfC DNA-binding family SSU16085_RS01080 PF01380 SIS domain SSU16085_RS01090 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SSU16085_RS01090 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SSU16085_RS01090 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SSU16085_RS01110 PF02901 Pyruvate formate lyase-like SSU16085_RS01110 PF01228 Glycine radical SSU16085_RS01115 PF00817 impB/mucB/samB family SSU16085_RS01115 PF11799 impB/mucB/samB family C-terminal domain SSU16085_RS01115 PF11798 IMS family HHH motif SSU16085_RS01125 PF13460 NAD(P)H-binding SSU16085_RS01140 PF00480 ROK family SSU16085_RS01145 PF02378 Phosphotransferase system, EIIC SSU16085_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS01170 PF00005 ABC transporter SSU16085_RS01180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SSU16085_RS01185 PF00403 Heavy-metal-associated domain SSU16085_RS01195 PF00403 Heavy-metal-associated domain SSU16085_RS01200 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SSU16085_RS01200 PF14490 Helix-hairpin-helix containing domain SSU16085_RS01200 PF13538 UvrD-like helicase C-terminal domain SSU16085_RS01205 PF10502 Signal peptidase, peptidase S26 SSU16085_RS01210 PF01351 Ribonuclease HII SSU16085_RS01210 PF11858 Domain of unknown function (DUF3378) SSU16085_RS01215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SSU16085_RS01215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SSU16085_RS01225 PF00128 Alpha amylase, catalytic domain SSU16085_RS01225 PF16657 Maltogenic Amylase, C-terminal domain SSU16085_RS01230 PF02378 Phosphotransferase system, EIIC SSU16085_RS01230 PF00367 phosphotransferase system, EIIB SSU16085_RS01235 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS01235 PF07702 UTRA domain SSU16085_RS01250 PF01713 Smr domain SSU16085_RS01250 PF00488 MutS domain V SSU16085_RS01260 PF00085 Thioredoxin SSU16085_RS01265 PF00501 AMP-binding enzyme SSU16085_RS01265 PF13193 AMP-binding enzyme C-terminal domain SSU16085_RS01270 PF01641 SelR domain SSU16085_RS01270 PF01625 Peptide methionine sulfoxide reductase SSU16085_RS01290 PF12704 MacB-like periplasmic core domain SSU16085_RS01290 PF02687 FtsX-like permease family SSU16085_RS01290 PF00005 ABC transporter SSU16085_RS01295 PF01235 Sodium:alanine symporter family SSU16085_RS01300 PF00924 Mechanosensitive ion channel SSU16085_RS01310 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SSU16085_RS01310 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SSU16085_RS01320 PF01180 Dihydroorotate dehydrogenase SSU16085_RS01325 PF09587 Bacterial capsule synthesis protein PGA_cap SSU16085_RS01350 PF00005 ABC transporter SSU16085_RS01350 PF00664 ABC transporter transmembrane region SSU16085_RS01370 PF00005 ABC transporter SSU16085_RS01375 PF00440 Bacterial regulatory proteins, tetR family SSU16085_RS01400 PF03788 LrgA family SSU16085_RS01405 PF04172 LrgB-like family SSU16085_RS01410 PF01226 Formate/nitrite transporter SSU16085_RS01415 PF00230 Major intrinsic protein SSU16085_RS01420 PF05872 Bacterial protein of unknown function (DUF853) SSU16085_RS01425 PF00293 NUDIX domain SSU16085_RS01445 PF00471 Ribosomal protein L33 SSU16085_RS01450 PF01783 Ribosomal L32p protein family SSU16085_RS01460 PF03129 Anticodon binding domain SSU16085_RS01460 PF13393 Histidyl-tRNA synthetase SSU16085_RS01465 PF08240 Alcohol dehydrogenase GroES-like domain SSU16085_RS01465 PF00107 Zinc-binding dehydrogenase SSU16085_RS01470 PF00171 Aldehyde dehydrogenase family SSU16085_RS01470 PF00465 Iron-containing alcohol dehydrogenase SSU16085_RS01475 PF00291 Pyridoxal-phosphate dependent enzyme SSU16085_RS01475 PF14821 Threonine synthase N terminus SSU16085_RS01480 PF00005 ABC transporter SSU16085_RS01480 PF00664 ABC transporter transmembrane region SSU16085_RS01485 PF00005 ABC transporter SSU16085_RS01485 PF00664 ABC transporter transmembrane region SSU16085_RS01500 PF00005 ABC transporter SSU16085_RS01505 PF01554 MatE SSU16085_RS01510 PF00288 GHMP kinases N terminal domain SSU16085_RS01510 PF08544 GHMP kinases C terminal SSU16085_RS01510 PF10509 Galactokinase galactose-binding signature SSU16085_RS01520 PF00288 GHMP kinases N terminal domain SSU16085_RS01520 PF08544 GHMP kinases C terminal SSU16085_RS01525 PF01070 FMN-dependent dehydrogenase SSU16085_RS01530 PF00664 ABC transporter transmembrane region SSU16085_RS01530 PF00005 ABC transporter SSU16085_RS01535 PF00005 ABC transporter SSU16085_RS01535 PF00664 ABC transporter transmembrane region SSU16085_RS01545 PF05167 Uncharacterised ACR (DUF711) SSU16085_RS01550 PF00300 Histidine phosphatase superfamily (branch 1) SSU16085_RS01555 PF01628 HrcA protein C terminal domain SSU16085_RS01555 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SSU16085_RS01560 PF01025 GrpE SSU16085_RS01565 PF00012 Hsp70 protein SSU16085_RS01570 PF01556 DnaJ C terminal domain SSU16085_RS01570 PF00684 DnaJ central domain SSU16085_RS01570 PF00226 DnaJ domain SSU16085_RS01575 PF03099 Biotin/lipoate A/B protein ligase family SSU16085_RS01580 PF01425 Amidase SSU16085_RS01585 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS01620 PF01475 Ferric uptake regulator family SSU16085_RS01625 PF01416 tRNA pseudouridine synthase SSU16085_RS01640 PF04260 Protein of unknown function (DUF436) SSU16085_RS01665 PF12697 Alpha/beta hydrolase family SSU16085_RS01670 PF00106 short chain dehydrogenase SSU16085_RS01675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SSU16085_RS01675 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS01680 PF13460 NAD(P)H-binding SSU16085_RS01685 PF02082 Transcriptional regulator SSU16085_RS01705 PF05698 Bacterial trigger factor protein (TF) C-terminus SSU16085_RS01705 PF05697 Bacterial trigger factor protein (TF) SSU16085_RS01705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SSU16085_RS01725 PF05066 HB1, ASXL, restriction endonuclease HTH domain SSU16085_RS01730 PF00117 Glutamine amidotransferase class-I SSU16085_RS01730 PF06418 CTP synthase N-terminus SSU16085_RS01740 PF01116 Fructose-bisphosphate aldolase class-II SSU16085_RS01745 PF00830 Ribosomal L28 family SSU16085_RS01780 PF17191 RecG wedge domain SSU16085_RS01780 PF00270 DEAD/DEAH box helicase SSU16085_RS01780 PF00271 Helicase conserved C-terminal domain SSU16085_RS01785 PF00710 Asparaginase, N-terminal SSU16085_RS01785 PF17763 Glutaminase/Asparaginase C-terminal domain SSU16085_RS01790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSU16085_RS01800 PF00582 Universal stress protein family SSU16085_RS01805 PF00155 Aminotransferase class I and II SSU16085_RS01810 PF08222 CodY helix-turn-helix domain SSU16085_RS01810 PF06018 CodY GAF-like domain SSU16085_RS01815 PF00857 Isochorismatase family SSU16085_RS01820 PF01245 Ribosomal protein L19 SSU16085_RS01835 PF00860 Permease family SSU16085_RS01855 PF00005 ABC transporter SSU16085_RS01860 PF00312 Ribosomal protein S15 SSU16085_RS01865 PF01138 3' exoribonuclease family, domain 1 SSU16085_RS01865 PF00575 S1 RNA binding domain SSU16085_RS01865 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SSU16085_RS01865 PF03725 3' exoribonuclease family, domain 2 SSU16085_RS01865 PF00013 KH domain SSU16085_RS01870 PF06426 Serine acetyltransferase, N-terminal SSU16085_RS01870 PF00132 Bacterial transferase hexapeptide (six repeats) SSU16085_RS01885 PF01406 tRNA synthetases class I (C) catalytic domain SSU16085_RS01885 PF09190 DALR domain SSU16085_RS01890 PF00636 Ribonuclease III domain SSU16085_RS01910 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SSU16085_RS01910 PF01074 Glycosyl hydrolases family 38 N-terminal domain SSU16085_RS01910 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SSU16085_RS01910 PF07748 Glycosyl hydrolases family 38 C-terminal domain SSU16085_RS01910 PF09261 Alpha mannosidase middle domain SSU16085_RS01915 PF00480 ROK family SSU16085_RS01925 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS01930 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS01935 PF12010 Domain of unknown function (DUF3502) SSU16085_RS01945 PF06580 Histidine kinase SSU16085_RS01945 PF02743 Cache domain SSU16085_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS01945 PF00672 HAMP domain SSU16085_RS01950 PF12833 Helix-turn-helix domain SSU16085_RS01950 PF00072 Response regulator receiver domain SSU16085_RS01955 PF13556 PucR C-terminal helix-turn-helix domain SSU16085_RS01960 PF03459 TOBE domain SSU16085_RS01960 PF17912 MalK OB fold domain SSU16085_RS01960 PF00005 ABC transporter SSU16085_RS01985 PF00588 SpoU rRNA Methylase family SSU16085_RS01985 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSU16085_RS01995 PF02645 Uncharacterised protein, DegV family COG1307 SSU16085_RS02005 PF00572 Ribosomal protein L13 SSU16085_RS02010 PF00380 Ribosomal protein S9/S16 SSU16085_RS02085 PF01883 Iron-sulfur cluster assembly protein SSU16085_RS02095 PF00920 Dehydratase family SSU16085_RS02105 PF00535 Glycosyl transferase family 2 SSU16085_RS02110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SSU16085_RS02110 PF00205 Thiamine pyrophosphate enzyme, central domain SSU16085_RS02110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SSU16085_RS02115 PF10369 Small subunit of acetolactate synthase SSU16085_RS02115 PF01842 ACT domain SSU16085_RS02120 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SSU16085_RS02120 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SSU16085_RS02125 PF00291 Pyridoxal-phosphate dependent enzyme SSU16085_RS02125 PF00585 C-terminal regulatory domain of Threonine dehydratase SSU16085_RS02140 PF00005 ABC transporter SSU16085_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS02150 PF02673 Bacitracin resistance protein BacA SSU16085_RS02155 PF05389 Negative regulator of genetic competence (MecA) SSU16085_RS02160 PF00953 Glycosyl transferase family 4 SSU16085_RS02165 PF00005 ABC transporter SSU16085_RS02170 PF01458 Uncharacterized protein family (UPF0051) SSU16085_RS02175 PF00266 Aminotransferase class-V SSU16085_RS02180 PF01592 NifU-like N terminal domain SSU16085_RS02185 PF01458 Uncharacterized protein family (UPF0051) SSU16085_RS02190 PF07943 Penicillin-binding protein 5, C-terminal domain SSU16085_RS02190 PF00768 D-alanyl-D-alanine carboxypeptidase SSU16085_RS02195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SSU16085_RS02200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSU16085_RS02200 PF00005 ABC transporter SSU16085_RS02205 PF00005 ABC transporter SSU16085_RS02205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSU16085_RS02210 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS02215 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS02220 PF03780 Asp23 family, cell envelope-related function SSU16085_RS02225 PF02734 DAK2 domain SSU16085_RS02225 PF13684 Dihydroxyacetone kinase family SSU16085_RS02230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SSU16085_RS02240 PF03816 Cell envelope-related transcriptional attenuator domain SSU16085_RS02250 PF01230 HIT domain SSU16085_RS02255 PF00005 ABC transporter SSU16085_RS02260 PF05975 Bacterial ABC transporter protein EcsB SSU16085_RS02270 PF02390 Putative methyltransferase SSU16085_RS02275 PF17384 RimP C-terminal SH3 domain SSU16085_RS02275 PF02576 RimP N-terminal domain SSU16085_RS02280 PF13184 NusA-like KH domain SSU16085_RS02280 PF00575 S1 RNA binding domain SSU16085_RS02280 PF08529 NusA N-terminal domain SSU16085_RS02285 PF04296 Protein of unknown function (DUF448) SSU16085_RS02290 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SSU16085_RS02295 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS02295 PF11987 Translation-initiation factor 2 SSU16085_RS02295 PF04760 Translation initiation factor IF-2, N-terminal region SSU16085_RS02300 PF02033 Ribosome-binding factor A SSU16085_RS02310 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 SSU16085_RS02315 PF03458 UPF0126 domain SSU16085_RS02320 PF00676 Dehydrogenase E1 component SSU16085_RS02325 PF02780 Transketolase, C-terminal domain SSU16085_RS02325 PF02779 Transketolase, pyrimidine binding domain SSU16085_RS02325 PF00364 Biotin-requiring enzyme SSU16085_RS02330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SSU16085_RS02330 PF02817 e3 binding domain SSU16085_RS02330 PF00364 Biotin-requiring enzyme SSU16085_RS02335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU16085_RS02335 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS02350 PF00367 phosphotransferase system, EIIB SSU16085_RS02350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU16085_RS02350 PF02378 Phosphotransferase system, EIIC SSU16085_RS02365 PF12833 Helix-turn-helix domain SSU16085_RS02365 PF02311 AraC-like ligand binding domain SSU16085_RS02370 PF00232 Glycosyl hydrolase family 1 SSU16085_RS02375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU16085_RS02380 PF00232 Glycosyl hydrolase family 1 SSU16085_RS02385 PF04193 PQ loop repeat SSU16085_RS02395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU16085_RS02400 PF00874 PRD domain SSU16085_RS02400 PF05043 Mga helix-turn-helix domain SSU16085_RS02400 PF08279 HTH domain SSU16085_RS02400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU16085_RS02405 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSU16085_RS02415 PF02378 Phosphotransferase system, EIIC SSU16085_RS02420 PF00232 Glycosyl hydrolase family 1 SSU16085_RS02425 PF00300 Histidine phosphatase superfamily (branch 1) SSU16085_RS02430 PF00232 Glycosyl hydrolase family 1 SSU16085_RS02435 PF10437 Bacterial lipoate protein ligase C-terminus SSU16085_RS02435 PF03099 Biotin/lipoate A/B protein ligase family SSU16085_RS02440 PF01250 Ribosomal protein S6 SSU16085_RS02445 PF00436 Single-strand binding protein family SSU16085_RS02450 PF01084 Ribosomal protein S18 SSU16085_RS02465 PF17760 UvrA interaction domain SSU16085_RS02465 PF17755 UvrA DNA-binding domain SSU16085_RS02465 PF00005 ABC transporter SSU16085_RS02470 PF00557 Metallopeptidase family M24 SSU16085_RS02470 PF01321 Creatinase/Prolidase N-terminal domain SSU16085_RS02475 PF01132 Elongation factor P (EF-P) OB domain SSU16085_RS02475 PF09285 Elongation factor P, C-terminal SSU16085_RS02475 PF08207 Elongation factor P (EF-P) KOW-like domain SSU16085_RS02480 PF03780 Asp23 family, cell envelope-related function SSU16085_RS02485 PF01029 NusB family SSU16085_RS02490 PF01610 Transposase SSU16085_RS02490 PF13683 Integrase core domain SSU16085_RS02495 PF00356 Bacterial regulatory proteins, lacI family SSU16085_RS02500 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSU16085_RS02500 PF08244 Glycosyl hydrolases family 32 C terminal SSU16085_RS02505 PF02378 Phosphotransferase system, EIIC SSU16085_RS02505 PF00367 phosphotransferase system, EIIB SSU16085_RS02505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU16085_RS02510 PF00480 ROK family SSU16085_RS02520 PF07516 SecA Wing and Scaffold domain SSU16085_RS02520 PF01043 SecA preprotein cross-linking domain SSU16085_RS02520 PF02810 SEC-C motif SSU16085_RS02520 PF07517 SecA DEAD-like domain SSU16085_RS02525 PF01648 4'-phosphopantetheinyl transferase superfamily SSU16085_RS02530 PF01168 Alanine racemase, N-terminal domain SSU16085_RS02530 PF00842 Alanine racemase, C-terminal domain SSU16085_RS02535 PF00696 Amino acid kinase family SSU16085_RS02535 PF13840 ACT domain SSU16085_RS02540 PF13419 Haloacid dehalogenase-like hydrolase SSU16085_RS02545 PF00378 Enoyl-CoA hydratase/isomerase SSU16085_RS02555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SSU16085_RS02555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SSU16085_RS02560 PF00550 Phosphopantetheine attachment site SSU16085_RS02565 PF03060 Nitronate monooxygenase SSU16085_RS02570 PF00698 Acyl transferase domain SSU16085_RS02580 PF00109 Beta-ketoacyl synthase, N-terminal domain SSU16085_RS02580 PF02801 Beta-ketoacyl synthase, C-terminal domain SSU16085_RS02585 PF00364 Biotin-requiring enzyme SSU16085_RS02590 PF07977 FabA-like domain SSU16085_RS02595 PF00289 Biotin carboxylase, N-terminal domain SSU16085_RS02595 PF02785 Biotin carboxylase C-terminal domain SSU16085_RS02595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSU16085_RS02600 PF01039 Carboxyl transferase domain SSU16085_RS02605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SSU16085_RS02640 PF18766 SWI2/SNF2 ATPase SSU16085_RS02640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSU16085_RS02640 PF12008 Type I restriction and modification enzyme - subunit R C terminal SSU16085_RS02650 PF12728 Helix-turn-helix domain SSU16085_RS02650 PF02661 Fic/DOC family SSU16085_RS02660 PF02384 N-6 DNA Methylase SSU16085_RS02660 PF12161 HsdM N-terminal domain SSU16085_RS02665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSU16085_RS02665 PF02403 Seryl-tRNA synthetase N-terminal domain SSU16085_RS02675 PF03613 PTS system mannose/fructose/sorbose family IID component SSU16085_RS02680 PF03609 PTS system sorbose-specific iic component SSU16085_RS02685 PF03830 PTS system sorbose subfamily IIB component SSU16085_RS02685 PF03610 PTS system fructose IIA component SSU16085_RS02695 PF00860 Permease family SSU16085_RS02700 PF13683 Integrase core domain SSU16085_RS02700 PF01610 Transposase SSU16085_RS02705 PF02219 Methylenetetrahydrofolate reductase SSU16085_RS02710 PF01717 Cobalamin-independent synthase, Catalytic domain SSU16085_RS02710 PF08267 Cobalamin-independent synthase, N-terminal domain SSU16085_RS02715 PF07722 Peptidase C26 SSU16085_RS02720 PF03180 NLPA lipoprotein SSU16085_RS02725 PF01546 Peptidase family M20/M25/M40 SSU16085_RS02725 PF07687 Peptidase dimerisation domain SSU16085_RS02730 PF09383 NIL domain SSU16085_RS02730 PF00005 ABC transporter SSU16085_RS02735 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS02750 PF02091 Glycyl-tRNA synthetase alpha subunit SSU16085_RS02755 PF02092 Glycyl-tRNA synthetase beta subunit SSU16085_RS02765 PF05979 Bacterial protein of unknown function (DUF896) SSU16085_RS02775 PF01554 MatE SSU16085_RS02780 PF02254 TrkA-N domain SSU16085_RS02780 PF02080 TrkA-C domain SSU16085_RS02785 PF02386 Cation transport protein SSU16085_RS02795 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS02800 PF00348 Polyprenyl synthetase SSU16085_RS02805 PF04205 FMN-binding domain SSU16085_RS02810 PF02424 ApbE family SSU16085_RS02850 PF01795 MraW methylase family SSU16085_RS02860 PF00905 Penicillin binding protein transpeptidase domain SSU16085_RS02860 PF03717 Penicillin-binding Protein dimerisation domain SSU16085_RS02860 PF03793 PASTA domain SSU16085_RS02865 PF00953 Glycosyl transferase family 4 SSU16085_RS02865 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SSU16085_RS02880 PF02774 Semialdehyde dehydrogenase, dimerisation domain SSU16085_RS02880 PF01118 Semialdehyde dehydrogenase, NAD binding domain SSU16085_RS02885 PF00701 Dihydrodipicolinate synthetase family SSU16085_RS02890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU16085_RS02890 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS02900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SSU16085_RS02900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SSU16085_RS02905 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SSU16085_RS02905 PF01266 FAD dependent oxidoreductase SSU16085_RS02910 PF00230 Major intrinsic protein SSU16085_RS02915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU16085_RS02925 PF01432 Peptidase family M3 SSU16085_RS02925 PF08439 Oligopeptidase F SSU16085_RS02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS02935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU16085_RS02940 PF12728 Helix-turn-helix domain SSU16085_RS02940 PF02661 Fic/DOC family SSU16085_RS02945 PF00580 UvrD/REP helicase N-terminal domain SSU16085_RS02945 PF13361 UvrD-like helicase C-terminal domain SSU16085_RS02955 PF08543 Phosphomethylpyrimidine kinase SSU16085_RS02960 PF02110 Hydroxyethylthiazole kinase family SSU16085_RS02965 PF02581 Thiamine monophosphate synthase SSU16085_RS02980 PF01048 Phosphorylase superfamily SSU16085_RS02990 PF02361 Cobalt transport protein SSU16085_RS02995 PF00005 ABC transporter SSU16085_RS03000 PF00005 ABC transporter SSU16085_RS03005 PF01609 Transposase DDE domain SSU16085_RS03010 PF13419 Haloacid dehalogenase-like hydrolase SSU16085_RS03040 PF00005 ABC transporter SSU16085_RS03045 PF08459 UvrC Helix-hairpin-helix N-terminal SSU16085_RS03045 PF01541 GIY-YIG catalytic domain SSU16085_RS03045 PF02151 UvrB/uvrC motif SSU16085_RS03055 PF09269 Domain of unknown function (DUF1967) SSU16085_RS03055 PF01018 GTP1/OBG SSU16085_RS03055 PF01926 50S ribosome-binding GTPase SSU16085_RS03065 PF04650 YSIRK type signal peptide SSU16085_RS03065 PF00746 LPXTG cell wall anchor motif SSU16085_RS03065 PF06458 MucBP domain SSU16085_RS03070 PF12705 PD-(D/E)XK nuclease superfamily SSU16085_RS03075 PF12705 PD-(D/E)XK nuclease superfamily SSU16085_RS03075 PF00580 UvrD/REP helicase N-terminal domain SSU16085_RS03075 PF13361 UvrD-like helicase C-terminal domain SSU16085_RS03080 PF02660 Glycerol-3-phosphate acyltransferase SSU16085_RS03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS03085 PF00986 DNA gyrase B subunit, carboxyl terminus SSU16085_RS03085 PF00204 DNA gyrase B SSU16085_RS03085 PF01751 Toprim domain SSU16085_RS03090 PF02661 Fic/DOC family SSU16085_RS03105 PF03989 DNA gyrase C-terminal domain, beta-propeller SSU16085_RS03105 PF00521 DNA gyrase/topoisomerase IV, subunit A SSU16085_RS03115 PF01063 Amino-transferase class IV SSU16085_RS03135 PF00575 S1 RNA binding domain SSU16085_RS03160 PF00266 Aminotransferase class-V SSU16085_RS03165 PF02926 THUMP domain SSU16085_RS03165 PF02568 Thiamine biosynthesis protein (ThiI) SSU16085_RS03170 PF05525 Branched-chain amino acid transport protein SSU16085_RS03175 PF00829 Ribosomal prokaryotic L21 protein SSU16085_RS03180 PF01016 Ribosomal L27 protein SSU16085_RS03185 PF13683 Integrase core domain SSU16085_RS03185 PF01610 Transposase SSU16085_RS03190 PF03466 LysR substrate binding domain SSU16085_RS03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSU16085_RS03195 PF01252 Signal peptidase (SPase) II SSU16085_RS03200 PF01479 S4 domain SSU16085_RS03200 PF00849 RNA pseudouridylate synthase SSU16085_RS03205 PF03831 PhnA domain SSU16085_RS03205 PF08274 PhnA Zinc-Ribbon SSU16085_RS03215 PF00156 Phosphoribosyl transferase domain SSU16085_RS03220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSU16085_RS03220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSU16085_RS03225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SSU16085_RS03225 PF00117 Glutamine amidotransferase class-I SSU16085_RS03230 PF02142 MGS-like domain SSU16085_RS03230 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SSU16085_RS03230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSU16085_RS03235 PF04445 Putative SAM-dependent methyltransferase SSU16085_RS03240 PF01470 Pyroglutamyl peptidase SSU16085_RS03250 PF00886 Ribosomal protein S16 SSU16085_RS03260 PF00005 ABC transporter SSU16085_RS03260 PF00664 ABC transporter transmembrane region SSU16085_RS03265 PF00005 ABC transporter SSU16085_RS03265 PF00664 ABC transporter transmembrane region SSU16085_RS03270 PF01522 Polysaccharide deacetylase SSU16085_RS03275 PF03447 Homoserine dehydrogenase, NAD binding domain SSU16085_RS03275 PF00742 Homoserine dehydrogenase SSU16085_RS03280 PF00288 GHMP kinases N terminal domain SSU16085_RS03280 PF08544 GHMP kinases C terminal SSU16085_RS03285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SSU16085_RS03285 PF01565 FAD binding domain SSU16085_RS03290 PF00005 ABC transporter SSU16085_RS03290 PF08402 TOBE domain SSU16085_RS03295 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS03305 PF13416 Bacterial extracellular solute-binding protein SSU16085_RS03325 PF01256 Carbohydrate kinase SSU16085_RS03330 PF10576 Iron-sulfur binding domain of endonuclease III SSU16085_RS03330 PF00633 Helix-hairpin-helix motif SSU16085_RS03330 PF00730 HhH-GPD superfamily base excision DNA repair protein SSU16085_RS03335 PF00478 IMP dehydrogenase / GMP reductase domain SSU16085_RS03340 PF01554 MatE SSU16085_RS03345 PF05239 PRC-barrel domain SSU16085_RS03345 PF01782 RimM N-terminal domain SSU16085_RS03350 PF01746 tRNA (Guanine-1)-methyltransferase SSU16085_RS03355 PF00155 Aminotransferase class I and II SSU16085_RS03360 PF00455 DeoR C terminal sensor domain SSU16085_RS03360 PF08220 DeoR-like helix-turn-helix domain SSU16085_RS03365 PF00294 pfkB family carbohydrate kinase SSU16085_RS03370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU16085_RS03370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU16085_RS03380 PF04167 Protein of unknown function (DUF402) SSU16085_RS03390 PF07702 UTRA domain SSU16085_RS03390 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS03455 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS03455 PF07702 UTRA domain SSU16085_RS03460 PF01301 Glycosyl hydrolases family 35 SSU16085_RS03465 PF03830 PTS system sorbose subfamily IIB component SSU16085_RS03475 PF03613 PTS system mannose/fructose/sorbose family IID component SSU16085_RS03485 PF01263 Aldose 1-epimerase SSU16085_RS03510 PF08264 Anticodon-binding domain of tRNA SSU16085_RS03510 PF10458 Valyl tRNA synthetase tRNA binding arm SSU16085_RS03510 PF00133 tRNA synthetases class I (I, L, M and V) SSU16085_RS03560 PF03590 Aspartate-ammonia ligase SSU16085_RS03565 PF03144 Elongation factor Tu domain 2 SSU16085_RS03565 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS03565 PF14492 Elongation Factor G, domain II SSU16085_RS03565 PF00679 Elongation factor G C-terminus SSU16085_RS03585 PF10502 Signal peptidase, peptidase S26 SSU16085_RS03590 PF08191 LRR adjacent SSU16085_RS03590 PF12799 Leucine Rich repeats (2 copies) SSU16085_RS03590 PF12354 Bacterial adhesion/invasion protein N terminal SSU16085_RS03590 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) SSU16085_RS03610 PF08245 Mur ligase middle domain SSU16085_RS03610 PF02875 Mur ligase family, glutamate ligase domain SSU16085_RS03615 PF03033 Glycosyltransferase family 28 N-terminal domain SSU16085_RS03615 PF04101 Glycosyltransferase family 28 C-terminal domain SSU16085_RS03620 PF08478 POTRA domain, FtsQ-type SSU16085_RS03625 PF11983 Membrane-attachment and polymerisation-promoting switch SSU16085_RS03625 PF02491 SHS2 domain inserted in FTSA SSU16085_RS03630 PF12327 FtsZ family, C-terminal domain SSU16085_RS03630 PF00091 Tubulin/FtsZ family, GTPase domain SSU16085_RS03635 PF01168 Alanine racemase, N-terminal domain SSU16085_RS03640 PF04472 Cell division protein SepF SSU16085_RS03655 PF05103 DivIVA protein SSU16085_RS03665 PF08264 Anticodon-binding domain of tRNA SSU16085_RS03665 PF00133 tRNA synthetases class I (I, L, M and V) SSU16085_RS03675 PF00300 Histidine phosphatase superfamily (branch 1) SSU16085_RS03675 PF00293 NUDIX domain SSU16085_RS03680 PF17871 AAA lid domain SSU16085_RS03680 PF10431 C-terminal, D2-small domain, of ClpB protein SSU16085_RS03680 PF07724 AAA domain (Cdc48 subfamily) SSU16085_RS03680 PF00004 ATPase family associated with various cellular activities (AAA) SSU16085_RS03685 PF08796 Protein of unknown function (DUF1797) SSU16085_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS03695 PF00005 ABC transporter SSU16085_RS03700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SSU16085_RS03700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SSU16085_RS03710 PF10502 Signal peptidase, peptidase S26 SSU16085_RS03735 PF13411 MerR HTH family regulatory protein SSU16085_RS03750 PF01136 Peptidase family U32 SSU16085_RS03750 PF16325 Peptidase family U32 C-terminal domain SSU16085_RS03760 PF02229 Transcriptional Coactivator p15 (PC4) SSU16085_RS03765 PF02632 BioY family SSU16085_RS03770 PF04199 Putative cyclase SSU16085_RS03775 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS03775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU16085_RS03780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SSU16085_RS03785 PF00005 ABC transporter SSU16085_RS03790 PF02687 FtsX-like permease family SSU16085_RS03790 PF12704 MacB-like periplasmic core domain SSU16085_RS03800 PF01336 OB-fold nucleic acid binding domain SSU16085_RS03800 PF00152 tRNA synthetases class II (D, K and N) SSU16085_RS03810 PF04073 Aminoacyl-tRNA editing domain SSU16085_RS03820 PF09515 Thiamine transporter protein (Thia_YuaJ) SSU16085_RS03840 PF01098 Cell cycle protein SSU16085_RS03845 PF00311 Phosphoenolpyruvate carboxylase SSU16085_RS03860 PF03144 Elongation factor Tu domain 2 SSU16085_RS03860 PF03143 Elongation factor Tu C-terminal domain SSU16085_RS03860 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS03870 PF01381 Helix-turn-helix SSU16085_RS03880 PF00121 Triosephosphate isomerase SSU16085_RS03890 PF01966 HD domain SSU16085_RS03905 PF00689 Cation transporting ATPase, C-terminus SSU16085_RS03905 PF00690 Cation transporter/ATPase, N-terminus SSU16085_RS03920 PF04892 VanZ like family SSU16085_RS03925 PF08331 Domain of unknown function (DUF1730) SSU16085_RS03935 PF00005 ABC transporter SSU16085_RS03940 PF02687 FtsX-like permease family SSU16085_RS03940 PF18075 FtsX extracellular domain SSU16085_RS03945 PF07664 Ferrous iron transport protein B C terminus SSU16085_RS03945 PF17910 FeoB cytosolic helical domain SSU16085_RS03945 PF07670 Nucleoside recognition SSU16085_RS03945 PF02421 Ferrous iron transport protein B SSU16085_RS03960 PF00005 ABC transporter SSU16085_RS03960 PF00664 ABC transporter transmembrane region SSU16085_RS03965 PF00005 ABC transporter SSU16085_RS03965 PF00664 ABC transporter transmembrane region SSU16085_RS03970 PF13419 Haloacid dehalogenase-like hydrolase SSU16085_RS03975 PF01289 Thiol-activated cytolysin SSU16085_RS03975 PF17440 Thiol-activated cytolysin beta sandwich domain SSU16085_RS03980 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SSU16085_RS03990 PF01380 SIS domain SSU16085_RS03990 PF01418 Helix-turn-helix domain, rpiR family SSU16085_RS03995 PF02130 Uncharacterized protein family UPF0054 SSU16085_RS04000 PF01219 Prokaryotic diacylglycerol kinase SSU16085_RS04005 PF01926 50S ribosome-binding GTPase SSU16085_RS04005 PF07650 KH domain SSU16085_RS04010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SSU16085_RS04010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SSU16085_RS04010 PF06827 Zinc finger found in FPG and IleRS SSU16085_RS04015 PF01121 Dephospho-CoA kinase SSU16085_RS04020 PF00083 Sugar (and other) transporter SSU16085_RS04020 PF07690 Major Facilitator Superfamily SSU16085_RS04025 PF00471 Ribosomal protein L33 SSU16085_RS04035 PF17876 Cold shock domain SSU16085_RS04035 PF00575 S1 RNA binding domain SSU16085_RS04035 PF00773 RNB domain SSU16085_RS04035 PF08206 Ribonuclease B OB domain SSU16085_RS04040 PF01668 SmpB protein SSU16085_RS04045 PF00107 Zinc-binding dehydrogenase SSU16085_RS04045 PF08240 Alcohol dehydrogenase GroES-like domain SSU16085_RS04050 PF03848 Tellurite resistance protein TehB SSU16085_RS04050 PF09313 Domain of unknown function (DUF1971) SSU16085_RS04055 PF03577 Peptidase family C69 SSU16085_RS04060 PF00403 Heavy-metal-associated domain SSU16085_RS04065 PF08534 Redoxin SSU16085_RS04075 PF00005 ABC transporter SSU16085_RS04090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SSU16085_RS04090 PF00476 DNA polymerase family A SSU16085_RS04090 PF01367 5'-3' exonuclease, C-terminal SAM fold SSU16085_RS04100 PF13380 CoA binding domain SSU16085_RS04110 PF01702 Queuine tRNA-ribosyltransferase SSU16085_RS04115 PF00557 Metallopeptidase family M24 SSU16085_RS04115 PF01321 Creatinase/Prolidase N-terminal domain SSU16085_RS04120 PF00356 Bacterial regulatory proteins, lacI family SSU16085_RS04130 PF13439 Glycosyltransferase Family 4 SSU16085_RS04130 PF00534 Glycosyl transferases group 1 SSU16085_RS04135 PF00534 Glycosyl transferases group 1 SSU16085_RS04135 PF13439 Glycosyltransferase Family 4 SSU16085_RS04150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSU16085_RS04150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSU16085_RS04150 PF02824 TGS domain SSU16085_RS04150 PF03129 Anticodon binding domain SSU16085_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS04160 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS04165 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS04170 PF00005 ABC transporter SSU16085_RS04175 PF00486 Transcriptional regulatory protein, C terminal SSU16085_RS04175 PF00072 Response regulator receiver domain SSU16085_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS04180 PF00512 His Kinase A (phospho-acceptor) domain SSU16085_RS04180 PF13426 PAS domain SSU16085_RS04180 PF00672 HAMP domain SSU16085_RS04185 PF00753 Metallo-beta-lactamase superfamily SSU16085_RS04190 PF12848 ABC transporter SSU16085_RS04190 PF16326 ABC transporter C-terminal domain SSU16085_RS04190 PF00005 ABC transporter SSU16085_RS04195 PF03717 Penicillin-binding Protein dimerisation domain SSU16085_RS04195 PF00905 Penicillin binding protein transpeptidase domain SSU16085_RS04200 PF02132 RecR protein SSU16085_RS04200 PF13662 Toprim domain SSU16085_RS04205 PF07478 D-ala D-ala ligase C-terminus SSU16085_RS04205 PF01820 D-ala D-ala ligase N-terminus SSU16085_RS04215 PF02687 FtsX-like permease family SSU16085_RS04235 PF01225 Mur ligase family, catalytic domain SSU16085_RS04235 PF02875 Mur ligase family, glutamate ligase domain SSU16085_RS04235 PF08245 Mur ligase middle domain SSU16085_RS04250 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS04250 PF16658 Class II release factor RF3, C-terminal domain SSU16085_RS04250 PF03144 Elongation factor Tu domain 2 SSU16085_RS04255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSU16085_RS04275 PF00356 Bacterial regulatory proteins, lacI family SSU16085_RS04280 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS04285 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS04290 PF01547 Bacterial extracellular solute-binding protein SSU16085_RS04295 PF08244 Glycosyl hydrolases family 32 C terminal SSU16085_RS04295 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSU16085_RS04300 PF01580 FtsK/SpoIIIE family SSU16085_RS04300 PF17854 FtsK alpha domain SSU16085_RS04300 PF09397 Ftsk gamma domain SSU16085_RS04305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU16085_RS04315 PF00298 Ribosomal protein L11, RNA binding domain SSU16085_RS04315 PF03946 Ribosomal protein L11, N-terminal domain SSU16085_RS04320 PF00687 Ribosomal protein L1p/L10e family SSU16085_RS04330 PF02798 Glutathione S-transferase, N-terminal domain SSU16085_RS04340 PF14667 Polysaccharide biosynthesis C-terminal domain SSU16085_RS04340 PF01943 Polysaccharide biosynthesis protein SSU16085_RS04345 PF00696 Amino acid kinase family SSU16085_RS04350 PF01765 Ribosome recycling factor SSU16085_RS04355 PF17783 CvfB-like winged helix domain SSU16085_RS04355 PF13509 S1 domain SSU16085_RS04360 PF02558 Ketopantoate reductase PanE/ApbA SSU16085_RS04360 PF08546 Ketopantoate reductase PanE/ApbA C terminal SSU16085_RS04370 PF06855 YozE SAM-like fold SSU16085_RS04375 PF02562 PhoH-like protein SSU16085_RS04380 PF01717 Cobalamin-independent synthase, Catalytic domain SSU16085_RS04385 PF07690 Major Facilitator Superfamily SSU16085_RS04400 PF16360 GTP-binding GTPase Middle Region SSU16085_RS04400 PF01926 50S ribosome-binding GTPase SSU16085_RS04400 PF13167 GTP-binding GTPase N-terminal SSU16085_RS04410 PF00753 Metallo-beta-lactamase superfamily SSU16085_RS04410 PF12706 Beta-lactamase superfamily domain SSU16085_RS04415 PF00106 short chain dehydrogenase SSU16085_RS04425 PF13091 PLD-like domain SSU16085_RS04430 PF01368 DHH family SSU16085_RS04430 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SSU16085_RS04430 PF02272 DHHA1 domain SSU16085_RS04430 PF17768 RecJ OB domain SSU16085_RS04440 PF00156 Phosphoribosyl transferase domain SSU16085_RS04445 PF04204 Homoserine O-succinyltransferase SSU16085_RS04455 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SSU16085_RS04460 PF01784 NIF3 (NGG1p interacting factor 3) SSU16085_RS04475 PF00483 Nucleotidyl transferase SSU16085_RS04480 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SSU16085_RS04490 PF16363 GDP-mannose 4,6 dehydratase SSU16085_RS04495 PF04321 RmlD substrate binding domain SSU16085_RS04505 PF05036 Sporulation related domain SSU16085_RS04505 PF01520 N-acetylmuramoyl-L-alanine amidase SSU16085_RS04525 PF00535 Glycosyl transferase family 2 SSU16085_RS04525 PF01501 Glycosyl transferase family 8 SSU16085_RS04535 PF14524 Wzt C-terminal domain SSU16085_RS04535 PF00005 ABC transporter SSU16085_RS04555 PF01501 Glycosyl transferase family 8 SSU16085_RS04560 PF00535 Glycosyl transferase family 2 SSU16085_RS04560 PF01501 Glycosyl transferase family 8 SSU16085_RS04570 PF13439 Glycosyltransferase Family 4 SSU16085_RS04570 PF00534 Glycosyl transferases group 1 SSU16085_RS04575 PF00535 Glycosyl transferase family 2 SSU16085_RS04605 PF02224 Cytidylate kinase SSU16085_RS04610 PF05198 Translation initiation factor IF-3, N-terminal domain SSU16085_RS04610 PF00707 Translation initiation factor IF-3, C-terminal domain SSU16085_RS04615 PF01632 Ribosomal protein L35 SSU16085_RS04620 PF00453 Ribosomal protein L20 SSU16085_RS04630 PF00884 Sulfatase SSU16085_RS04635 PF17785 PUA-like domain SSU16085_RS04635 PF10672 S-adenosylmethionine-dependent methyltransferase SSU16085_RS04640 PF01487 Type I 3-dehydroquinase SSU16085_RS04645 PF01264 Chorismate synthase SSU16085_RS04650 PF02153 Prephenate dehydrogenase SSU16085_RS04655 PF06133 Control of competence regulator ComK, YlbF/YmcA SSU16085_RS04660 PF01979 Amidohydrolase family SSU16085_RS04665 PF01791 DeoC/LacD family aldolase SSU16085_RS04680 PF02653 Branched-chain amino acid transport system / permease component SSU16085_RS04685 PF00005 ABC transporter SSU16085_RS04690 PF01761 3-dehydroquinate synthase SSU16085_RS04700 PF00793 DAHP synthetase I family SSU16085_RS04705 PF00793 DAHP synthetase I family SSU16085_RS04715 PF01588 Putative tRNA binding domain SSU16085_RS04715 PF09334 tRNA synthetases class I (M) SSU16085_RS04725 PF08439 Oligopeptidase F SSU16085_RS04725 PF01432 Peptidase family M3 SSU16085_RS04740 PF01596 O-methyltransferase SSU16085_RS04745 PF13145 PPIC-type PPIASE domain SSU16085_RS04755 PF02272 DHHA1 domain SSU16085_RS04755 PF01411 tRNA synthetases class II (A) SSU16085_RS04755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSU16085_RS04775 PF01381 Helix-turn-helix SSU16085_RS04810 PF00268 Ribonucleotide reductase, small chain SSU16085_RS04815 PF02867 Ribonucleotide reductase, barrel domain SSU16085_RS04815 PF08343 Ribonucleotide reductase N-terminal SSU16085_RS04815 PF00317 Ribonucleotide reductase, all-alpha domain SSU16085_RS04820 PF00462 Glutaredoxin SSU16085_RS04825 PF00694 Aconitase C-terminal domain SSU16085_RS04825 PF00330 Aconitase family (aconitate hydratase) SSU16085_RS04830 PF00285 Citrate synthase, C-terminal domain SSU16085_RS04835 PF00180 Isocitrate/isopropylmalate dehydrogenase SSU16085_RS04840 PF00381 PTS HPr component phosphorylation site SSU16085_RS04845 PF02896 PEP-utilising enzyme, TIM barrel domain SSU16085_RS04845 PF05524 PEP-utilising enzyme, N-terminal SSU16085_RS04845 PF00391 PEP-utilising enzyme, mobile domain SSU16085_RS04850 PF08903 Domain of unknown function (DUF1846) SSU16085_RS04870 PF00035 Double-stranded RNA binding motif SSU16085_RS04870 PF14622 Ribonuclease-III-like SSU16085_RS04875 PF06470 SMC proteins Flexible Hinge Domain SSU16085_RS04875 PF02463 RecF/RecN/SMC N terminal domain SSU16085_RS04890 PF02881 SRP54-type protein, helical bundle domain SSU16085_RS04890 PF00448 SRP54-type protein, GTPase domain SSU16085_RS04910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SSU16085_RS04910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SSU16085_RS04915 PF09323 Domain of unknown function (DUF1980) SSU16085_RS04920 PF03773 Predicted permease SSU16085_RS04930 PF00533 BRCA1 C Terminus (BRCT) domain SSU16085_RS04930 PF12826 Helix-hairpin-helix motif SSU16085_RS04930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SSU16085_RS04930 PF03120 NAD-dependent DNA ligase OB-fold domain SSU16085_RS04930 PF01653 NAD-dependent DNA ligase adenylation domain SSU16085_RS04935 PF00781 Diacylglycerol kinase catalytic domain SSU16085_RS04940 PF00137 ATP synthase subunit C SSU16085_RS04945 PF00119 ATP synthase A chain SSU16085_RS04950 PF00430 ATP synthase B/B' CF(0) SSU16085_RS04955 PF00213 ATP synthase delta (OSCP) subunit SSU16085_RS04960 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSU16085_RS04960 PF00306 ATP synthase alpha/beta chain, C terminal domain SSU16085_RS04960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSU16085_RS04965 PF00231 ATP synthase SSU16085_RS04970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSU16085_RS04970 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSU16085_RS04975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SSU16085_RS04975 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SSU16085_RS04985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSU16085_RS04990 PF11772 DNA-directed RNA polymerase subunit beta SSU16085_RS04995 PF01223 DNA/RNA non-specific endonuclease SSU16085_RS05005 PF00294 pfkB family carbohydrate kinase SSU16085_RS05010 PF00703 Glycosyl hydrolases family 2 SSU16085_RS05010 PF02837 Glycosyl hydrolases family 2, sugar binding domain SSU16085_RS05010 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SSU16085_RS05015 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS05015 PF07729 FCD domain SSU16085_RS05020 PF01081 KDPG and KHG aldolase SSU16085_RS05025 PF02614 Glucuronate isomerase SSU16085_RS05030 PF03786 D-mannonate dehydratase (UxuA) SSU16085_RS05035 PF00106 short chain dehydrogenase SSU16085_RS05045 PF00933 Glycosyl hydrolase family 3 N terminal domain SSU16085_RS05050 PF00933 Glycosyl hydrolase family 3 N terminal domain SSU16085_RS05055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SSU16085_RS05055 PF01409 tRNA synthetases class II core domain (F) SSU16085_RS05060 PF13673 Acetyltransferase (GNAT) domain SSU16085_RS05065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SSU16085_RS05065 PF03483 B3/4 domain SSU16085_RS05065 PF03484 tRNA synthetase B5 domain SSU16085_RS05065 PF03147 Ferredoxin-fold anticodon binding domain SSU16085_RS05065 PF01588 Putative tRNA binding domain SSU16085_RS05090 PF00293 NUDIX domain SSU16085_RS05095 PF01227 GTP cyclohydrolase I SSU16085_RS05100 PF00809 Pterin binding enzyme SSU16085_RS05105 PF02152 Dihydroneopterin aldolase SSU16085_RS05110 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SSU16085_RS05120 PF16916 Dimerisation domain of Zinc Transporter SSU16085_RS05120 PF01545 Cation efflux family SSU16085_RS05135 PF01047 MarR family SSU16085_RS05140 PF06993 Protein of unknown function (DUF1304) SSU16085_RS05175 PF07687 Peptidase dimerisation domain SSU16085_RS05175 PF01546 Peptidase family M20/M25/M40 SSU16085_RS05220 PF01509 TruB family pseudouridylate synthase (N terminal domain) SSU16085_RS05220 PF16198 tRNA pseudouridylate synthase B C-terminal domain SSU16085_RS05225 PF01687 Riboflavin kinase SSU16085_RS05225 PF06574 FAD synthetase SSU16085_RS05230 PF07885 Ion channel SSU16085_RS05235 PF03960 ArsC family SSU16085_RS05240 PF05256 Uncharacterised protein family (UPF0223) SSU16085_RS05245 PF00459 Inositol monophosphatase family SSU16085_RS05250 PF01189 16S rRNA methyltransferase RsmB/F SSU16085_RS05250 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SSU16085_RS05250 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SSU16085_RS05255 PF12849 PBP superfamily domain SSU16085_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS05270 PF00005 ABC transporter SSU16085_RS05275 PF00005 ABC transporter SSU16085_RS05280 PF01895 PhoU domain SSU16085_RS05290 PF00486 Transcriptional regulatory protein, C terminal SSU16085_RS05290 PF00072 Response regulator receiver domain SSU16085_RS05295 PF00512 His Kinase A (phospho-acceptor) domain SSU16085_RS05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS05305 PF01649 Ribosomal protein S20 SSU16085_RS05310 PF00485 Phosphoribulokinase / Uridine kinase family SSU16085_RS05315 PF05175 Methyltransferase small domain SSU16085_RS05320 PF02885 Glycosyl transferase family, helical bundle domain SSU16085_RS05320 PF00591 Glycosyl transferase family, a/b domain SSU16085_RS05320 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SSU16085_RS05325 PF01791 DeoC/LacD family aldolase SSU16085_RS05330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSU16085_RS05335 PF02608 ABC transporter substrate-binding protein PnrA-like SSU16085_RS05340 PF00005 ABC transporter SSU16085_RS05345 PF02653 Branched-chain amino acid transport system / permease component SSU16085_RS05350 PF02653 Branched-chain amino acid transport system / permease component SSU16085_RS05355 PF01872 RibD C-terminal domain SSU16085_RS05360 PF01872 RibD C-terminal domain SSU16085_RS05365 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SSU16085_RS05365 PF00056 lactate/malate dehydrogenase, NAD binding domain SSU16085_RS05370 PF03989 DNA gyrase C-terminal domain, beta-propeller SSU16085_RS05370 PF00521 DNA gyrase/topoisomerase IV, subunit A SSU16085_RS05375 PF04203 Sortase domain SSU16085_RS05380 PF04002 RadC-like JAB domain SSU16085_RS05385 PF07722 Peptidase C26 SSU16085_RS05390 PF06971 Putative DNA-binding protein N-terminus SSU16085_RS05390 PF02629 CoA binding domain SSU16085_RS05405 PF00266 Aminotransferase class-V SSU16085_RS05410 PF14572 Phosphoribosyl synthetase-associated domain SSU16085_RS05410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSU16085_RS05415 PF01928 CYTH domain SSU16085_RS05420 PF04607 Region found in RelA / SpoT proteins SSU16085_RS05425 PF01513 ATP-NAD kinase SSU16085_RS05430 PF00849 RNA pseudouridylate synthase SSU16085_RS05435 PF01515 Phosphate acetyl/butaryl transferase SSU16085_RS05440 PF00664 ABC transporter transmembrane region SSU16085_RS05440 PF00005 ABC transporter SSU16085_RS05445 PF00664 ABC transporter transmembrane region SSU16085_RS05445 PF00005 ABC transporter SSU16085_RS05455 PF00730 HhH-GPD superfamily base excision DNA repair protein SSU16085_RS05455 PF14815 NUDIX domain SSU16085_RS05485 PF08220 DeoR-like helix-turn-helix domain SSU16085_RS05485 PF00455 DeoR C terminal sensor domain SSU16085_RS05490 PF02502 Ribose/Galactose Isomerase SSU16085_RS05495 PF02502 Ribose/Galactose Isomerase SSU16085_RS05500 PF00294 pfkB family carbohydrate kinase SSU16085_RS05505 PF01791 DeoC/LacD family aldolase SSU16085_RS05510 PF01610 Transposase SSU16085_RS05510 PF13683 Integrase core domain SSU16085_RS05515 PF03123 CAT RNA binding domain SSU16085_RS05515 PF00874 PRD domain SSU16085_RS05520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSU16085_RS05525 PF02378 Phosphotransferase system, EIIC SSU16085_RS05525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU16085_RS05530 PF00232 Glycosyl hydrolase family 1 SSU16085_RS05535 PF01263 Aldose 1-epimerase SSU16085_RS05545 PF01609 Transposase DDE domain SSU16085_RS05560 PF08220 DeoR-like helix-turn-helix domain SSU16085_RS05560 PF00455 DeoR C terminal sensor domain SSU16085_RS05565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SSU16085_RS05565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SSU16085_RS05570 PF00596 Class II Aldolase and Adducin N-terminal domain SSU16085_RS05575 PF05025 RbsD / FucU transport protein family SSU16085_RS05585 PF03830 PTS system sorbose subfamily IIB component SSU16085_RS05595 PF03613 PTS system mannose/fructose/sorbose family IID component SSU16085_RS05610 PF07881 L-fucose isomerase, first N-terminal domain SSU16085_RS05610 PF07882 L-fucose isomerase, second N-terminal domain SSU16085_RS05610 PF02952 L-fucose isomerase, C-terminal domain SSU16085_RS05665 PF02796 Helix-turn-helix domain of resolvase SSU16085_RS05665 PF00239 Resolvase, N terminal domain SSU16085_RS05685 PF12848 ABC transporter SSU16085_RS05685 PF16326 ABC transporter C-terminal domain SSU16085_RS05685 PF00005 ABC transporter SSU16085_RS05695 PF00005 ABC transporter SSU16085_RS05700 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS05705 PF17757 UvrB interaction domain SSU16085_RS05705 PF12344 Ultra-violet resistance protein B SSU16085_RS05705 PF04851 Type III restriction enzyme, res subunit SSU16085_RS05705 PF00271 Helicase conserved C-terminal domain SSU16085_RS05705 PF02151 UvrB/uvrC motif SSU16085_RS05710 PF04650 YSIRK type signal peptide SSU16085_RS05710 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SSU16085_RS05710 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SSU16085_RS05710 PF07501 G5 domain SSU16085_RS05735 PF00145 C-5 cytosine-specific DNA methylase SSU16085_RS05825 PF06696 Streptococcal surface antigen repeat SSU16085_RS05825 PF08363 Glucan-binding protein C SSU16085_RS05825 PF16364 Cell surface antigen C-terminus SSU16085_RS05825 PF18652 Adhesin P1 N-terminal domain SSU16085_RS05825 PF17998 Cell surface antigen I/II C2 terminal domain SSU16085_RS05845 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SSU16085_RS05845 PF01348 Type II intron maturase SSU16085_RS05860 PF00679 Elongation factor G C-terminus SSU16085_RS05860 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS05860 PF03764 Elongation factor G, domain IV SSU16085_RS05860 PF14492 Elongation Factor G, domain II SSU16085_RS05895 PF01076 Plasmid recombination enzyme SSU16085_RS05900 PF02195 ParB-like nuclease domain SSU16085_RS05900 PF17762 HTH domain found in ParB protein SSU16085_RS05905 PF02229 Transcriptional Coactivator p15 (PC4) SSU16085_RS05925 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) SSU16085_RS05930 PF00398 Ribosomal RNA adenine dimethylase SSU16085_RS05940 PF13614 AAA domain SSU16085_RS05950 PF08998 Bacterial epsilon antitoxin SSU16085_RS05955 PF06414 Zeta toxin SSU16085_RS06020 PF03432 Relaxase/Mobilisation nuclease domain SSU16085_RS06035 PF00005 ABC transporter SSU16085_RS06075 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS06090 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS06095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSU16085_RS06095 PF00128 Alpha amylase, catalytic domain SSU16085_RS06095 PF02806 Alpha amylase, C-terminal all-beta domain SSU16085_RS06100 PF08323 Starch synthase catalytic domain SSU16085_RS06100 PF00534 Glycosyl transferases group 1 SSU16085_RS06105 PF00132 Bacterial transferase hexapeptide (six repeats) SSU16085_RS06105 PF00483 Nucleotidyl transferase SSU16085_RS06110 PF00483 Nucleotidyl transferase SSU16085_RS06115 PF03466 LysR substrate binding domain SSU16085_RS06115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSU16085_RS06120 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SSU16085_RS06125 PF01180 Dihydroorotate dehydrogenase SSU16085_RS06130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSU16085_RS06135 PF00719 Inorganic pyrophosphatase SSU16085_RS06140 PF00156 Phosphoribosyl transferase domain SSU16085_RS06145 PF00535 Glycosyl transferase family 2 SSU16085_RS06150 PF03167 Uracil DNA glycosylase superfamily SSU16085_RS06155 PF01979 Amidohydrolase family SSU16085_RS06160 PF00149 Calcineurin-like phosphoesterase SSU16085_RS06160 PF02872 5'-nucleotidase, C-terminal domain SSU16085_RS06165 PF02545 Maf-like protein SSU16085_RS06235 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SSU16085_RS06235 PF05257 CHAP domain SSU16085_RS06260 PF00145 C-5 cytosine-specific DNA methylase SSU16085_RS06265 PF00145 C-5 cytosine-specific DNA methylase SSU16085_RS06305 PF02378 Phosphotransferase system, EIIC SSU16085_RS06305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU16085_RS06305 PF00367 phosphotransferase system, EIIB SSU16085_RS06320 PF01965 DJ-1/PfpI family SSU16085_RS06345 PF01381 Helix-turn-helix SSU16085_RS06345 PF00717 Peptidase S24-like SSU16085_RS06355 PF03432 Relaxase/Mobilisation nuclease domain SSU16085_RS06370 PF06134 L-rhamnose isomerase (RhaA) SSU16085_RS06370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SSU16085_RS06370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SSU16085_RS06375 PF07881 L-fucose isomerase, first N-terminal domain SSU16085_RS06375 PF02952 L-fucose isomerase, C-terminal domain SSU16085_RS06375 PF07882 L-fucose isomerase, second N-terminal domain SSU16085_RS06380 PF00596 Class II Aldolase and Adducin N-terminal domain SSU16085_RS06385 PF01547 Bacterial extracellular solute-binding protein SSU16085_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS06410 PF00480 ROK family SSU16085_RS06415 PF08305 NPCBM/NEW2 domain SSU16085_RS06415 PF08306 Glycosyl hydrolase family 98 SSU16085_RS06415 PF08307 Glycosyl hydrolase family 98 C-terminal domain SSU16085_RS06420 PF01381 Helix-turn-helix SSU16085_RS06430 PF14659 Phage integrase, N-terminal SAM-like domain SSU16085_RS06430 PF00589 Phage integrase family SSU16085_RS06435 PF01926 50S ribosome-binding GTPase SSU16085_RS06440 PF01351 Ribonuclease HII SSU16085_RS06450 PF03006 Haemolysin-III related SSU16085_RS06460 PF01206 Sulfurtransferase TusA SSU16085_RS06460 PF00581 Rhodanese-like domain SSU16085_RS06470 PF02481 DNA recombination-mediator protein A SSU16085_RS06470 PF18255 DNA processing protein A sterile alpha motif domain SSU16085_RS06475 PF01131 DNA topoisomerase SSU16085_RS06475 PF01396 Topoisomerase DNA binding C4 zinc finger SSU16085_RS06475 PF01751 Toprim domain SSU16085_RS06480 PF00466 Ribosomal protein L10 SSU16085_RS06485 PF16320 Ribosomal protein L7/L12 dimerisation domain SSU16085_RS06485 PF00542 Ribosomal protein L7/L12 C-terminal domain SSU16085_RS06495 PF01134 Glucose inhibited division protein A SSU16085_RS06510 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase SSU16085_RS06510 PF00756 Putative esterase SSU16085_RS06535 PF00005 ABC transporter SSU16085_RS06550 PF00005 ABC transporter SSU16085_RS06575 PF13683 Integrase core domain SSU16085_RS06575 PF01610 Transposase SSU16085_RS06585 PF00512 His Kinase A (phospho-acceptor) domain SSU16085_RS06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS06590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSU16085_RS06590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSU16085_RS06590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSU16085_RS06590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSU16085_RS06595 PF00589 Phage integrase family SSU16085_RS06595 PF13495 Phage integrase, N-terminal SAM-like domain SSU16085_RS06615 PF00448 SRP54-type protein, GTPase domain SSU16085_RS06615 PF02881 SRP54-type protein, helical bundle domain SSU16085_RS06615 PF02978 Signal peptide binding domain SSU16085_RS06620 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SSU16085_RS06625 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS06625 PF07702 UTRA domain SSU16085_RS06630 PF00117 Glutamine amidotransferase class-I SSU16085_RS06630 PF00958 GMP synthase C terminal domain SSU16085_RS06630 PF02540 NAD synthase SSU16085_RS06635 PF10117 McrBC 5-methylcytosine restriction system component SSU16085_RS06640 PF07728 AAA domain (dynein-related subfamily) SSU16085_RS06640 PF12102 Domain of unknown function (DUF3578) SSU16085_RS06665 PF00106 short chain dehydrogenase SSU16085_RS06680 PF00464 Serine hydroxymethyltransferase SSU16085_RS06690 PF03481 Putative GTP-binding controlling metal-binding SSU16085_RS06690 PF01300 Telomere recombination SSU16085_RS06695 PF05175 Methyltransferase small domain SSU16085_RS06700 PF00472 RF-1 domain SSU16085_RS06700 PF03462 PCRF domain SSU16085_RS06705 PF00265 Thymidine kinase SSU16085_RS06720 PF01361 Tautomerase enzyme SSU16085_RS06725 PF14492 Elongation Factor G, domain II SSU16085_RS06725 PF00009 Elongation factor Tu GTP binding domain SSU16085_RS06725 PF00679 Elongation factor G C-terminus SSU16085_RS06725 PF03144 Elongation factor Tu domain 2 SSU16085_RS06725 PF06421 GTP-binding protein LepA C-terminus SSU16085_RS06730 PF00334 Nucleoside diphosphate kinase SSU16085_RS06735 PF01926 50S ribosome-binding GTPase SSU16085_RS06740 PF06689 ClpX C4-type zinc finger SSU16085_RS06740 PF10431 C-terminal, D2-small domain, of ClpB protein SSU16085_RS06740 PF07724 AAA domain (Cdc48 subfamily) SSU16085_RS06750 PF00186 Dihydrofolate reductase SSU16085_RS06755 PF00303 Thymidylate synthase SSU16085_RS06770 PF00480 ROK family SSU16085_RS06780 PF12848 ABC transporter SSU16085_RS06780 PF16326 ABC transporter C-terminal domain SSU16085_RS06780 PF00005 ABC transporter SSU16085_RS06785 PF01743 Poly A polymerase head domain SSU16085_RS06785 PF12627 Probable RNA and SrmB- binding site of polymerase A SSU16085_RS06785 PF13735 tRNA nucleotidyltransferase domain 2 putative SSU16085_RS06790 PF05173 Dihydrodipicolinate reductase, C-terminus SSU16085_RS06790 PF01113 Dihydrodipicolinate reductase, N-terminus SSU16085_RS06795 PF02645 Uncharacterised protein, DegV family COG1307 SSU16085_RS06810 PF01380 SIS domain SSU16085_RS06820 PF10502 Signal peptidase, peptidase S26 SSU16085_RS06825 PF07859 alpha/beta hydrolase fold SSU16085_RS06825 PF13472 GDSL-like Lipase/Acylhydrolase family SSU16085_RS06830 PF01266 FAD dependent oxidoreductase SSU16085_RS06835 PF09028 Mac 1 SSU16085_RS06840 PF00224 Pyruvate kinase, barrel domain SSU16085_RS06840 PF02887 Pyruvate kinase, alpha/beta domain SSU16085_RS06845 PF00365 Phosphofructokinase SSU16085_RS06850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SSU16085_RS06850 PF14579 Helix-hairpin-helix motif SSU16085_RS06850 PF02811 PHP domain SSU16085_RS06850 PF01336 OB-fold nucleic acid binding domain SSU16085_RS06850 PF07733 Bacterial DNA polymerase III alpha NTPase domain SSU16085_RS06855 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS06855 PF07702 UTRA domain SSU16085_RS06860 PF00005 ABC transporter SSU16085_RS06870 PF00962 Adenosine/AMP deaminase SSU16085_RS06905 PF01883 Iron-sulfur cluster assembly protein SSU16085_RS06910 PF04542 Sigma-70 region 2 SSU16085_RS06910 PF00140 Sigma-70 factor, region 1.2 SSU16085_RS06910 PF04539 Sigma-70 region 3 SSU16085_RS06910 PF04545 Sigma-70, region 4 SSU16085_RS06910 PF03979 Sigma-70 factor, region 1.1 SSU16085_RS06915 PF10410 DnaB-helicase binding domain of primase SSU16085_RS06915 PF01807 CHC2 zinc finger SSU16085_RS06915 PF08275 DNA primase catalytic core, N-terminal domain SSU16085_RS06920 PF01741 Large-conductance mechanosensitive channel, MscL SSU16085_RS06925 PF16363 GDP-mannose 4,6 dehydratase SSU16085_RS06930 PF01165 Ribosomal protein S21 SSU16085_RS06940 PF13344 Haloacid dehalogenase-like hydrolase SSU16085_RS06945 PF00293 NUDIX domain SSU16085_RS06955 PF06969 HemN C-terminal domain SSU16085_RS06955 PF04055 Radical SAM superfamily SSU16085_RS06965 PF00343 Carbohydrate phosphorylase SSU16085_RS06970 PF01048 Phosphorylase superfamily SSU16085_RS06975 PF01048 Phosphorylase superfamily SSU16085_RS06985 PF01676 Metalloenzyme superfamily SSU16085_RS06990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SSU16085_RS06995 PF01420 Type I restriction modification DNA specificity domain SSU16085_RS07000 PF00589 Phage integrase family SSU16085_RS07000 PF02899 Phage integrase, N-terminal SAM-like domain SSU16085_RS07010 PF01420 Type I restriction modification DNA specificity domain SSU16085_RS07015 PF12161 HsdM N-terminal domain SSU16085_RS07015 PF02384 N-6 DNA Methylase SSU16085_RS07020 PF00271 Helicase conserved C-terminal domain SSU16085_RS07020 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SSU16085_RS07020 PF04851 Type III restriction enzyme, res subunit SSU16085_RS07020 PF08463 EcoEI R protein C-terminal SSU16085_RS07025 PF10396 GTP-binding protein TrmE N-terminus SSU16085_RS07025 PF12631 MnmE helical domain SSU16085_RS07025 PF01926 50S ribosome-binding GTPase SSU16085_RS07040 PF01145 SPFH domain / Band 7 family SSU16085_RS07040 PF15975 Flotillin SSU16085_RS07045 PF04011 LemA family SSU16085_RS07055 PF03167 Uracil DNA glycosylase superfamily SSU16085_RS07065 PF01546 Peptidase family M20/M25/M40 SSU16085_RS07070 PF00375 Sodium:dicarboxylate symporter family SSU16085_RS07075 PF08241 Methyltransferase domain SSU16085_RS07080 PF00005 ABC transporter SSU16085_RS07080 PF12848 ABC transporter SSU16085_RS07085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSU16085_RS07085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSU16085_RS07085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSU16085_RS07085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSU16085_RS07095 PF02457 DisA bacterial checkpoint controller nucleotide-binding SSU16085_RS07100 PF08353 Domain of unknown function (DUF1727) SSU16085_RS07100 PF08245 Mur ligase middle domain SSU16085_RS07105 PF07685 CobB/CobQ-like glutamine amidotransferase domain SSU16085_RS07120 PF12848 ABC transporter SSU16085_RS07120 PF16326 ABC transporter C-terminal domain SSU16085_RS07120 PF00005 ABC transporter SSU16085_RS07135 PF00756 Putative esterase SSU16085_RS07140 PF00753 Metallo-beta-lactamase superfamily SSU16085_RS07140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SSU16085_RS07140 PF17770 Ribonuclease J C-terminal domain SSU16085_RS07155 PF00005 ABC transporter SSU16085_RS07155 PF08402 TOBE domain SSU16085_RS07170 PF00232 Glycosyl hydrolase family 1 SSU16085_RS07175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU16085_RS07175 PF00367 phosphotransferase system, EIIB SSU16085_RS07175 PF02378 Phosphotransferase system, EIIC SSU16085_RS07180 PF00874 PRD domain SSU16085_RS07180 PF03123 CAT RNA binding domain SSU16085_RS07185 PF05670 NFACT protein RNA binding domain SSU16085_RS07190 PF03306 Alpha-acetolactate decarboxylase SSU16085_RS07200 PF01594 AI-2E family transporter SSU16085_RS07205 PF10282 Lactonase, 7-bladed beta-propeller SSU16085_RS07215 PF13419 Haloacid dehalogenase-like hydrolase SSU16085_RS07220 PF00113 Enolase, C-terminal TIM barrel domain SSU16085_RS07220 PF03952 Enolase, N-terminal domain SSU16085_RS07230 PF02595 Glycerate kinase family SSU16085_RS07235 PF13419 Haloacid dehalogenase-like hydrolase SSU16085_RS07245 PF06160 Septation ring formation regulator, EzrA SSU16085_RS07250 PF00204 DNA gyrase B SSU16085_RS07250 PF01751 Toprim domain SSU16085_RS07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS07250 PF00986 DNA gyrase B subunit, carboxyl terminus SSU16085_RS07255 PF01965 DJ-1/PfpI family SSU16085_RS07260 PF01098 Cell cycle protein SSU16085_RS07265 PF01197 Ribosomal protein L31 SSU16085_RS07270 PF02424 ApbE family SSU16085_RS07275 PF02272 DHHA1 domain SSU16085_RS07275 PF01368 DHH family SSU16085_RS07280 PF00258 Flavodoxin SSU16085_RS07285 PF00253 Ribosomal protein S14p/S29e SSU16085_RS07290 PF02153 Prephenate dehydrogenase SSU16085_RS07290 PF01817 Chorismate mutase type II SSU16085_RS07295 PF00654 Voltage gated chloride channel SSU16085_RS07305 PF02872 5'-nucleotidase, C-terminal domain SSU16085_RS07305 PF17936 Bacterial Ig domain SSU16085_RS07305 PF00149 Calcineurin-like phosphoesterase SSU16085_RS07310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SSU16085_RS07310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SSU16085_RS07315 PF06144 DNA polymerase III, delta subunit SSU16085_RS07325 PF02677 Epoxyqueuosine reductase QueH SSU16085_RS07330 PF00005 ABC transporter SSU16085_RS07335 PF00005 ABC transporter SSU16085_RS07335 PF12399 Branched-chain amino acid ATP-binding cassette transporter SSU16085_RS07340 PF11862 Domain of unknown function (DUF3382) SSU16085_RS07340 PF02653 Branched-chain amino acid transport system / permease component SSU16085_RS07345 PF02653 Branched-chain amino acid transport system / permease component SSU16085_RS07350 PF13458 Periplasmic binding protein SSU16085_RS07355 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SSU16085_RS07360 PF00574 Clp protease SSU16085_RS07370 PF16657 Maltogenic Amylase, C-terminal domain SSU16085_RS07370 PF00128 Alpha amylase, catalytic domain SSU16085_RS07375 PF00128 Alpha amylase, catalytic domain SSU16085_RS07380 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS07385 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS07390 PF01547 Bacterial extracellular solute-binding protein SSU16085_RS07395 PF16874 Glycosyl hydrolase family 36 C-terminal domain SSU16085_RS07395 PF16875 Glycosyl hydrolase family 36 N-terminal domain SSU16085_RS07400 PF02311 AraC-like ligand binding domain SSU16085_RS07400 PF12833 Helix-turn-helix domain SSU16085_RS07405 PF00155 Aminotransferase class I and II SSU16085_RS07410 PF01053 Cys/Met metabolism PLP-dependent enzyme SSU16085_RS07430 PF05175 Methyltransferase small domain SSU16085_RS07435 PF01541 GIY-YIG catalytic domain SSU16085_RS07445 PF02525 Flavodoxin-like fold SSU16085_RS07450 PF13673 Acetyltransferase (GNAT) domain SSU16085_RS07460 PF01022 Bacterial regulatory protein, arsR family SSU16085_RS07465 PF00271 Helicase conserved C-terminal domain SSU16085_RS07465 PF00270 DEAD/DEAH box helicase SSU16085_RS07470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU16085_RS07470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSU16085_RS07480 PF08000 Bacterial PH domain SSU16085_RS07505 PF01048 Phosphorylase superfamily SSU16085_RS07515 PF00293 NUDIX domain SSU16085_RS07520 PF00132 Bacterial transferase hexapeptide (six repeats) SSU16085_RS07520 PF14602 Hexapeptide repeat of succinyl-transferase SSU16085_RS07520 PF12804 MobA-like NTP transferase domain SSU16085_RS07570 PF00005 ABC transporter SSU16085_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS07580 PF00072 Response regulator receiver domain SSU16085_RS07580 PF00486 Transcriptional regulatory protein, C terminal SSU16085_RS07590 PF00155 Aminotransferase class I and II SSU16085_RS07600 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS07605 PF00005 ABC transporter SSU16085_RS07605 PF00571 CBS domain SSU16085_RS07625 PF01790 Prolipoprotein diacylglyceryl transferase SSU16085_RS07630 PF07475 HPr Serine kinase C-terminal domain SSU16085_RS07630 PF02603 HPr Serine kinase N terminus SSU16085_RS07635 PF01238 Phosphomannose isomerase type I SSU16085_RS07640 PF00232 Glycosyl hydrolase family 1 SSU16085_RS07645 PF00480 ROK family SSU16085_RS07650 PF12833 Helix-turn-helix domain SSU16085_RS07655 PF00404 Dockerin type I domain SSU16085_RS07655 PF00722 Glycosyl hydrolases family 16 SSU16085_RS07660 PF00404 Dockerin type I domain SSU16085_RS07660 PF00722 Glycosyl hydrolases family 16 SSU16085_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS07685 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain SSU16085_RS07685 PF06165 Glycosyltransferase family 36 SSU16085_RS07700 PF10263 SprT-like family SSU16085_RS07700 PF17283 SprT-like zinc ribbon domain SSU16085_RS07705 PF16921 Tex protein YqgF-like domain SSU16085_RS07705 PF17674 HHH domain SSU16085_RS07705 PF09371 Tex-like protein N-terminal domain SSU16085_RS07705 PF00575 S1 RNA binding domain SSU16085_RS07710 PF00248 Aldo/keto reductase family SSU16085_RS07715 PF06177 QueT transporter SSU16085_RS07720 PF04138 GtrA-like protein SSU16085_RS07730 PF00557 Metallopeptidase family M24 SSU16085_RS07740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSU16085_RS07745 PF02525 Flavodoxin-like fold SSU16085_RS07750 PF00438 S-adenosylmethionine synthetase, N-terminal domain SSU16085_RS07750 PF02772 S-adenosylmethionine synthetase, central domain SSU16085_RS07750 PF02773 S-adenosylmethionine synthetase, C-terminal domain SSU16085_RS07755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSU16085_RS07765 PF05343 M42 glutamyl aminopeptidase SSU16085_RS07780 PF12169 DNA polymerase III subunits gamma and tau domain III SSU16085_RS07785 PF13185 GAF domain SSU16085_RS07795 PF10400 Virulence activator alpha C-term SSU16085_RS07795 PF03551 Transcriptional regulator PadR-like family SSU16085_RS07800 PF00485 Phosphoribulokinase / Uridine kinase family SSU16085_RS07805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SSU16085_RS07810 PF00271 Helicase conserved C-terminal domain SSU16085_RS07810 PF00270 DEAD/DEAH box helicase SSU16085_RS07815 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SSU16085_RS07815 PF01522 Polysaccharide deacetylase SSU16085_RS07825 PF00300 Histidine phosphatase superfamily (branch 1) SSU16085_RS07830 PF00108 Thiolase, N-terminal domain SSU16085_RS07830 PF02803 Thiolase, C-terminal domain SSU16085_RS07835 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SSU16085_RS07835 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SSU16085_RS07840 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SSU16085_RS07850 PF00216 Bacterial DNA-binding protein SSU16085_RS07860 PF13472 GDSL-like Lipase/Acylhydrolase family SSU16085_RS07865 PF02645 Uncharacterised protein, DegV family COG1307 SSU16085_RS07870 PF13476 AAA domain SSU16085_RS07875 PF01316 Arginine repressor, DNA binding domain SSU16085_RS07875 PF02863 Arginine repressor, C-terminal domain SSU16085_RS07880 PF01728 FtsJ-like methyltransferase SSU16085_RS07880 PF01479 S4 domain SSU16085_RS07885 PF00348 Polyprenyl synthetase SSU16085_RS07890 PF02609 Exonuclease VII small subunit SSU16085_RS07895 PF13742 OB-fold nucleic acid binding domain SSU16085_RS07895 PF02601 Exonuclease VII, large subunit SSU16085_RS07900 PF04228 Putative neutral zinc metallopeptidase SSU16085_RS07905 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SSU16085_RS07910 PF13683 Integrase core domain SSU16085_RS07910 PF01610 Transposase SSU16085_RS07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS07915 PF00512 His Kinase A (phospho-acceptor) domain SSU16085_RS07915 PF00672 HAMP domain SSU16085_RS07920 PF00072 Response regulator receiver domain SSU16085_RS07920 PF00486 Transcriptional regulatory protein, C terminal SSU16085_RS07940 PF01368 DHH family SSU16085_RS07940 PF02833 DHHA2 domain SSU16085_RS07950 PF04055 Radical SAM superfamily SSU16085_RS07955 PF03471 Transporter associated domain SSU16085_RS07955 PF00571 CBS domain SSU16085_RS07955 PF01595 Cyclin M transmembrane N-terminal domain SSU16085_RS07960 PF00005 ABC transporter SSU16085_RS07965 PF06962 Putative rRNA methylase SSU16085_RS07970 PF01478 Type IV leader peptidase family SSU16085_RS07970 PF06750 Bacterial Peptidase A24 N-terminal domain SSU16085_RS07975 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SSU16085_RS07975 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SSU16085_RS07975 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SSU16085_RS07980 PF02540 NAD synthase SSU16085_RS07990 PF04055 Radical SAM superfamily SSU16085_RS07995 PF06265 Protein of unknown function (DUF1027) SSU16085_RS08000 PF13180 PDZ domain SSU16085_RS08000 PF05362 Lon protease (S16) C-terminal proteolytic domain SSU16085_RS08005 PF01467 Cytidylyltransferase-like SSU16085_RS08020 PF00581 Rhodanese-like domain SSU16085_RS08025 PF06014 Bacterial protein of unknown function (DUF910) SSU16085_RS08030 PF00196 Bacterial regulatory proteins, luxR family SSU16085_RS08030 PF00072 Response regulator receiver domain SSU16085_RS08035 PF07730 Histidine kinase SSU16085_RS08035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS08045 PF00005 ABC transporter SSU16085_RS08050 PF00210 Ferritin-like domain SSU16085_RS08055 PF05532 CsbD-like SSU16085_RS08060 PF01451 Low molecular weight phosphotyrosine protein phosphatase SSU16085_RS08070 PF01757 Acyltransferase family SSU16085_RS08075 PF01569 PAP2 superfamily SSU16085_RS08080 PF12822 ECF transporter, substrate-specific component SSU16085_RS08085 PF00588 SpoU rRNA Methylase family SSU16085_RS08090 PF01809 Putative membrane protein insertion efficiency factor SSU16085_RS08095 PF00849 RNA pseudouridylate synthase SSU16085_RS08095 PF01479 S4 domain SSU16085_RS08100 PF04079 Segregation and condensation complex subunit ScpB SSU16085_RS08105 PF02616 Segregation and condensation protein ScpA SSU16085_RS08110 PF00589 Phage integrase family SSU16085_RS08125 PF01725 Ham1 family SSU16085_RS08130 PF01177 Asp/Glu/Hydantoin racemase SSU16085_RS08135 PF03672 Uncharacterised protein family (UPF0154) SSU16085_RS08140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SSU16085_RS08140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SSU16085_RS08145 PF03051 Peptidase C1-like family SSU16085_RS08150 PF13683 Integrase core domain SSU16085_RS08150 PF01610 Transposase SSU16085_RS08155 PF01027 Inhibitor of apoptosis-promoting Bax1 SSU16085_RS08165 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSU16085_RS08165 PF00588 SpoU rRNA Methylase family SSU16085_RS08170 PF00708 Acylphosphatase SSU16085_RS08175 PF02096 60Kd inner membrane protein SSU16085_RS08180 PF03449 Transcription elongation factor, N-terminal SSU16085_RS08180 PF01272 Transcription elongation factor, GreA/GreB, C-term SSU16085_RS08185 PF02618 YceG-like family SSU16085_RS08195 PF08245 Mur ligase middle domain SSU16085_RS08195 PF02875 Mur ligase family, glutamate ligase domain SSU16085_RS08195 PF01225 Mur ligase family, catalytic domain SSU16085_RS08205 PF00176 SNF2 family N-terminal domain SSU16085_RS08205 PF00271 Helicase conserved C-terminal domain SSU16085_RS08205 PF04434 SWIM zinc finger SSU16085_RS08215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SSU16085_RS08215 PF01926 50S ribosome-binding GTPase SSU16085_RS08225 PF07319 Primosomal protein DnaI N-terminus SSU16085_RS08225 PF01695 IstB-like ATP binding protein SSU16085_RS08235 PF03477 ATP cone domain SSU16085_RS08240 PF01594 AI-2E family transporter SSU16085_RS08245 PF00072 Response regulator receiver domain SSU16085_RS08245 PF00486 Transcriptional regulatory protein, C terminal SSU16085_RS08250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SSU16085_RS08250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SSU16085_RS08260 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS08270 PF00271 Helicase conserved C-terminal domain SSU16085_RS08270 PF00270 DEAD/DEAH box helicase SSU16085_RS08310 PF00005 ABC transporter SSU16085_RS08320 PF02384 N-6 DNA Methylase SSU16085_RS08320 PF12161 HsdM N-terminal domain SSU16085_RS08325 PF18766 SWI2/SNF2 ATPase SSU16085_RS08325 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSU16085_RS08325 PF11867 Domain of unknown function (DUF3387) SSU16085_RS08330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU16085_RS08330 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS08340 PF01268 Formate--tetrahydrofolate ligase SSU16085_RS08345 PF04127 DNA / pantothenate metabolism flavoprotein SSU16085_RS08345 PF02441 Flavoprotein SSU16085_RS08350 PF02441 Flavoprotein SSU16085_RS08355 PF12822 ECF transporter, substrate-specific component SSU16085_RS08360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSU16085_RS08360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSU16085_RS08360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSU16085_RS08360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSU16085_RS08370 PF04851 Type III restriction enzyme, res subunit SSU16085_RS08370 PF08774 VRR-NUC domain SSU16085_RS08375 PF01555 DNA methylase SSU16085_RS08375 PF18273 Type III R-M EcoP15I C-terminal domain SSU16085_RS08400 PF13520 Amino acid permease SSU16085_RS08410 PF03372 Endonuclease/Exonuclease/phosphatase family SSU16085_RS08420 PF03960 ArsC family SSU16085_RS08425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SSU16085_RS08425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SSU16085_RS08430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SSU16085_RS08430 PF01842 ACT domain SSU16085_RS08430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SSU16085_RS08440 PF00266 Aminotransferase class-V SSU16085_RS08445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SSU16085_RS08450 PF06156 Initiation control protein YabA SSU16085_RS08455 PF09115 DNA polymerase III, delta subunit, C terminal SSU16085_RS08460 PF02223 Thymidylate kinase SSU16085_RS08465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSU16085_RS08465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU16085_RS08480 PF00571 CBS domain SSU16085_RS08490 PF00753 Metallo-beta-lactamase superfamily SSU16085_RS08490 PF03772 Competence protein SSU16085_RS08490 PF13567 Domain of unknown function (DUF4131) SSU16085_RS08495 PF10531 SLBB domain SSU16085_RS08500 PF01553 Acyltransferase SSU16085_RS08505 PF08245 Mur ligase middle domain SSU16085_RS08505 PF02875 Mur ligase family, glutamate ligase domain SSU16085_RS08510 PF00005 ABC transporter SSU16085_RS08515 PF01497 Periplasmic binding protein SSU16085_RS08520 PF01032 FecCD transport family SSU16085_RS08525 PF01032 FecCD transport family SSU16085_RS08530 PF00255 Glutathione peroxidase SSU16085_RS08535 PF01479 S4 domain SSU16085_RS08535 PF00849 RNA pseudouridylate synthase SSU16085_RS08540 PF13409 Glutathione S-transferase, N-terminal domain SSU16085_RS08555 PF00550 Phosphopantetheine attachment site SSU16085_RS08560 PF03062 MBOAT, membrane-bound O-acyltransferase family SSU16085_RS08565 PF00501 AMP-binding enzyme SSU16085_RS08565 PF13193 AMP-binding enzyme C-terminal domain SSU16085_RS08600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SSU16085_RS08605 PF02547 Queuosine biosynthesis protein SSU16085_RS08610 PF02863 Arginine repressor, C-terminal domain SSU16085_RS08610 PF01316 Arginine repressor, DNA binding domain SSU16085_RS08615 PF04650 YSIRK type signal peptide SSU16085_RS08615 PF00746 LPXTG cell wall anchor motif SSU16085_RS08615 PF00728 Glycosyl hydrolase family 20, catalytic domain SSU16085_RS08615 PF07501 G5 domain SSU16085_RS08620 PF01546 Peptidase family M20/M25/M40 SSU16085_RS08625 PF03606 C4-dicarboxylate anaerobic carrier SSU16085_RS08630 PF00696 Amino acid kinase family SSU16085_RS08635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSU16085_RS08635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSU16085_RS08640 PF13673 Acetyltransferase (GNAT) domain SSU16085_RS08655 PF10298 WhiA N-terminal LAGLIDADG-like domain SSU16085_RS08655 PF02650 WhiA C-terminal HTH domain SSU16085_RS08655 PF14527 WhiA LAGLIDADG-like domain SSU16085_RS08660 PF01933 Uncharacterised protein family UPF0052 SSU16085_RS08665 PF03668 P-loop ATPase protein family SSU16085_RS08670 PF01042 Endoribonuclease L-PSP SSU16085_RS08675 PF01554 MatE SSU16085_RS08680 PF00152 tRNA synthetases class II (D, K and N) SSU16085_RS08680 PF01336 OB-fold nucleic acid binding domain SSU16085_RS08685 PF00155 Aminotransferase class I and II SSU16085_RS08700 PF02525 Flavodoxin-like fold SSU16085_RS08705 PF03275 UDP-galactopyranose mutase SSU16085_RS08715 PF05958 tRNA (Uracil-5-)-methyltransferase SSU16085_RS08720 PF03816 Cell envelope-related transcriptional attenuator domain SSU16085_RS08725 PF00800 Prephenate dehydratase SSU16085_RS08730 PF01202 Shikimate kinase SSU16085_RS08735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSU16085_RS08740 PF00464 Serine hydroxymethyltransferase SSU16085_RS08750 PF00589 Phage integrase family SSU16085_RS08750 PF02899 Phage integrase, N-terminal SAM-like domain SSU16085_RS08770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SSU16085_RS08785 PF04991 LicD family SSU16085_RS08795 PF00535 Glycosyl transferase family 2 SSU16085_RS08800 PF02397 Bacterial sugar transferase SSU16085_RS08805 PF02719 Polysaccharide biosynthesis protein SSU16085_RS08815 PF13614 AAA domain SSU16085_RS08820 PF02706 Chain length determinant protein SSU16085_RS08825 PF03816 Cell envelope-related transcriptional attenuator domain SSU16085_RS08830 PF03883 Peroxide stress protein YaaA SSU16085_RS08835 PF00155 Aminotransferase class I and II SSU16085_RS08835 PF00392 Bacterial regulatory proteins, gntR family SSU16085_RS08840 PF02645 Uncharacterised protein, DegV family COG1307 SSU16085_RS08850 PF14748 Pyrroline-5-carboxylate reductase dimerisation SSU16085_RS08850 PF03807 NADP oxidoreductase coenzyme F420-dependent SSU16085_RS08855 PF00171 Aldehyde dehydrogenase family SSU16085_RS08860 PF00696 Amino acid kinase family SSU16085_RS08860 PF01472 PUA domain SSU16085_RS08865 PF00929 Exonuclease SSU16085_RS08865 PF13307 Helicase C-terminal domain SSU16085_RS08870 PF00753 Metallo-beta-lactamase superfamily SSU16085_RS08880 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS08885 PF00005 ABC transporter SSU16085_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS08900 PF02631 RecX family SSU16085_RS08905 PF05958 tRNA (Uracil-5-)-methyltransferase SSU16085_RS08905 PF01938 TRAM domain SSU16085_RS08980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SSU16085_RS08980 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SSU16085_RS08990 PF04851 Type III restriction enzyme, res subunit SSU16085_RS08990 PF00271 Helicase conserved C-terminal domain SSU16085_RS08995 PF09186 Domain of unknown function (DUF1949) SSU16085_RS08995 PF01205 Uncharacterized protein family UPF0029 SSU16085_RS09000 PF00291 Pyridoxal-phosphate dependent enzyme SSU16085_RS09005 PF00575 S1 RNA binding domain SSU16085_RS09010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSU16085_RS09015 PF00072 Response regulator receiver domain SSU16085_RS09015 PF00196 Bacterial regulatory proteins, luxR family SSU16085_RS09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU16085_RS09020 PF07730 Histidine kinase SSU16085_RS09030 PF00069 Protein kinase domain SSU16085_RS09030 PF03793 PASTA domain SSU16085_RS09040 PF01029 NusB family SSU16085_RS09040 PF01189 16S rRNA methyltransferase RsmB/F SSU16085_RS09045 PF00551 Formyl transferase SSU16085_RS09045 PF02911 Formyl transferase, C-terminal domain SSU16085_RS09050 PF00271 Helicase conserved C-terminal domain SSU16085_RS09050 PF04851 Type III restriction enzyme, res subunit SSU16085_RS09050 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SSU16085_RS09050 PF17764 3′ DNA-binding domain (3′BD) SSU16085_RS09050 PF18074 Primosomal protein N C-terminal domain SSU16085_RS09055 PF01192 RNA polymerase Rpb6 SSU16085_RS09060 PF00625 Guanylate kinase SSU16085_RS09065 PF12072 Domain of unknown function (DUF3552) SSU16085_RS09065 PF00013 KH domain SSU16085_RS09065 PF01966 HD domain SSU16085_RS09070 PF02664 S-Ribosylhomocysteinase (LuxS) SSU16085_RS09075 PF18041 MapZ extracellular domain 1 SSU16085_RS09075 PF18708 MapZ extracellular C-terminal domain 2 SSU16085_RS09080 PF01170 Putative RNA methylase family UPF0020 SSU16085_RS09080 PF02926 THUMP domain SSU16085_RS09090 PF05103 DivIVA protein SSU16085_RS09095 PF06908 YspA SLOG family SSU16085_RS09100 PF03838 Recombination protein U SSU16085_RS09105 PF00905 Penicillin binding protein transpeptidase domain SSU16085_RS09105 PF00912 Transglycosylase SSU16085_RS09110 PF02527 rRNA small subunit methyltransferase G SSU16085_RS09115 PF00313 'Cold-shock' DNA-binding domain SSU16085_RS09125 PF12558 ATP-binding cassette cobalt transporter SSU16085_RS09125 PF00005 ABC transporter SSU16085_RS09130 PF07730 Histidine kinase SSU16085_RS09135 PF00581 Rhodanese-like domain SSU16085_RS09135 PF12368 Rhodanase C-terminal SSU16085_RS09135 PF17773 UPF0176 acylphosphatase like domain SSU16085_RS09145 PF07155 ECF-type riboflavin transporter, S component SSU16085_RS09155 PF01709 Transcriptional regulator SSU16085_RS09170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU16085_RS09170 PF00367 phosphotransferase system, EIIB SSU16085_RS09170 PF02378 Phosphotransferase system, EIIC SSU16085_RS09175 PF03372 Endonuclease/Exonuclease/phosphatase family SSU16085_RS09185 PF00343 Carbohydrate phosphorylase SSU16085_RS09190 PF02446 4-alpha-glucanotransferase SSU16085_RS09195 PF07724 AAA domain (Cdc48 subfamily) SSU16085_RS09195 PF17871 AAA lid domain SSU16085_RS09195 PF00004 ATPase family associated with various cellular activities (AAA) SSU16085_RS09195 PF10431 C-terminal, D2-small domain, of ClpB protein SSU16085_RS09200 PF01327 Polypeptide deformylase SSU16085_RS09210 PF02388 FemAB family SSU16085_RS09215 PF13411 MerR HTH family regulatory protein SSU16085_RS09215 PF07739 TipAS antibiotic-recognition domain SSU16085_RS09230 PF05636 HIGH Nucleotidyl Transferase SSU16085_RS09245 PF13649 Methyltransferase domain SSU16085_RS09255 PF00857 Isochorismatase family SSU16085_RS09270 PF01966 HD domain SSU16085_RS09275 PF01467 Cytidylyltransferase-like SSU16085_RS09280 PF01985 CRS1 / YhbY (CRM) domain SSU16085_RS09285 PF01926 50S ribosome-binding GTPase SSU16085_RS09290 PF13419 Haloacid dehalogenase-like hydrolase SSU16085_RS09300 PF03932 CutC family SSU16085_RS09315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SSU16085_RS09315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SSU16085_RS09320 PF00288 GHMP kinases N terminal domain SSU16085_RS09320 PF08544 GHMP kinases C terminal SSU16085_RS09320 PF10509 Galactokinase galactose-binding signature SSU16085_RS09325 PF00356 Bacterial regulatory proteins, lacI family SSU16085_RS09335 PF02934 GatB/GatE catalytic domain SSU16085_RS09335 PF02637 GatB domain SSU16085_RS09340 PF01425 Amidase SSU16085_RS09345 PF02686 Glu-tRNAGln amidotransferase C subunit SSU16085_RS09365 PF01479 S4 domain SSU16085_RS09365 PF00849 RNA pseudouridylate synthase SSU16085_RS09385 PF01327 Polypeptide deformylase SSU16085_RS09395 PF00694 Aconitase C-terminal domain SSU16085_RS09400 PF00330 Aconitase family (aconitate hydratase) SSU16085_RS09405 PF00180 Isocitrate/isopropylmalate dehydrogenase SSU16085_RS09410 PF00682 HMGL-like SSU16085_RS09410 PF08502 LeuA allosteric (dimerisation) domain SSU16085_RS09420 PF02073 Thermophilic metalloprotease (M29) SSU16085_RS09430 PF13683 Integrase core domain SSU16085_RS09430 PF01610 Transposase SSU16085_RS09435 PF02811 PHP domain SSU16085_RS09435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SSU16085_RS09435 PF00929 Exonuclease SSU16085_RS09435 PF07733 Bacterial DNA polymerase III alpha NTPase domain SSU16085_RS09435 PF11490 DNA polymerase III polC-type N-terminus II SSU16085_RS09435 PF14480 DNA polymerase III polC-type N-terminus I SSU16085_RS09440 PF02733 Dak1 domain SSU16085_RS09450 PF02733 Dak1 domain SSU16085_RS09455 PF02734 DAK2 domain SSU16085_RS09460 PF03610 PTS system fructose IIA component SSU16085_RS09465 PF00230 Major intrinsic protein SSU16085_RS09470 PF04073 Aminoacyl-tRNA editing domain SSU16085_RS09470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSU16085_RS09470 PF03129 Anticodon binding domain SSU16085_RS09475 PF13180 PDZ domain SSU16085_RS09475 PF02163 Peptidase family M50 SSU16085_RS09485 PF01255 Putative undecaprenyl diphosphate synthase SSU16085_RS09490 PF02699 Preprotein translocase subunit SSU16085_RS09495 PF00709 Adenylosuccinate synthetase SSU16085_RS09500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSU16085_RS09500 PF18419 ATP-grasp-like domain SSU16085_RS09500 PF04262 Glutamate-cysteine ligase SSU16085_RS09510 PF01430 Hsp33 protein SSU16085_RS09515 PF01207 Dihydrouridine synthase (Dus) SSU16085_RS09520 PF01467 Cytidylyltransferase-like SSU16085_RS09525 PF00004 ATPase family associated with various cellular activities (AAA) SSU16085_RS09525 PF10431 C-terminal, D2-small domain, of ClpB protein SSU16085_RS09525 PF17871 AAA lid domain SSU16085_RS09525 PF02861 Clp amino terminal domain, pathogenicity island component SSU16085_RS09525 PF07724 AAA domain (Cdc48 subfamily) SSU16085_RS09530 PF17727 CtsR C-terminal dimerization domain SSU16085_RS09530 PF05848 CtsR N-terminal HTH domain SSU16085_RS09540 PF00889 Elongation factor TS SSU16085_RS09545 PF00318 Ribosomal protein S2 SSU16085_RS09555 PF00082 Subtilase family SSU16085_RS09555 PF06280 Fn3-like domain SSU16085_RS09555 PF00746 LPXTG cell wall anchor motif SSU16085_RS09555 PF02225 PA domain SSU16085_RS09560 PF02357 Transcription termination factor nusG SSU16085_RS09560 PF00467 KOW motif SSU16085_RS09570 PF00471 Ribosomal protein L33 SSU16085_RS09575 PF00905 Penicillin binding protein transpeptidase domain SSU16085_RS09575 PF00912 Transglycosylase SSU16085_RS09580 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU16085_RS09585 PF01479 S4 domain SSU16085_RS09585 PF00849 RNA pseudouridylate synthase SSU16085_RS09590 PF00156 Phosphoribosyl transferase domain SSU16085_RS09590 PF09182 Bacterial purine repressor, N-terminal SSU16085_RS09600 PF01966 HD domain SSU16085_RS09600 PF01336 OB-fold nucleic acid binding domain SSU16085_RS09605 PF02646 RmuC family SSU16085_RS09610 PF04263 Thiamin pyrophosphokinase, catalytic domain SSU16085_RS09610 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SSU16085_RS09615 PF00834 Ribulose-phosphate 3 epimerase family SSU16085_RS09620 PF16745 RsgA N-terminal domain SSU16085_RS09620 PF03193 RsgA GTPase SSU16085_RS09630 PF00005 ABC transporter SSU16085_RS09630 PF00664 ABC transporter transmembrane region SSU16085_RS09645 PF00398 Ribosomal RNA adenine dimethylase SSU16085_RS09655 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SSU16085_RS09665 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SSU16085_RS09665 PF00293 NUDIX domain SSU16085_RS09665 PF09297 NADH pyrophosphatase zinc ribbon domain SSU16085_RS09675 PF13331 Domain of unknown function (DUF4093) SSU16085_RS09680 PF01026 TatD related DNase SSU16085_RS09685 PF00468 Ribosomal protein L34 SSU16085_RS09690 PF14804 Jag N-terminus SSU16085_RS09690 PF01424 R3H domain SSU16085_RS09695 PF02096 60Kd inner membrane protein SSU16085_RS09700 PF00825 Ribonuclease P SSU16085_RS09705 PF14698 Argininosuccinate lyase C-terminal SSU16085_RS09705 PF00206 Lyase SSU16085_RS09710 PF00764 Arginosuccinate synthase SSU16085_RS09720 PF02829 3H domain SSU16085_RS09720 PF08279 HTH domain SSU16085_RS09735 PF02574 Homocysteine S-methyltransferase SSU16085_RS09740 PF00324 Amino acid permease SSU16085_RS09745 PF00749 tRNA synthetases class I (E and Q), catalytic domain SSU16085_RS09765 PF01987 Mitochondrial biogenesis AIM24 SSU16085_RS09770 PF00484 Carbonic anhydrase SSU16085_RS09775 PF18073 Rubredoxin metal binding domain SSU16085_RS09785 PF00692 dUTPase SSU16085_RS09790 PF00589 Phage integrase family SSU16085_RS09790 PF14659 Phage integrase, N-terminal SAM-like domain SSU16085_RS09880 PF00005 ABC transporter SSU16085_RS09880 PF00664 ABC transporter transmembrane region SSU16085_RS09885 PF00005 ABC transporter SSU16085_RS09885 PF00664 ABC transporter transmembrane region SSU16085_RS09895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SSU16085_RS09895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SSU16085_RS09900 PF00483 Nucleotidyl transferase SSU16085_RS09905 PF01694 Rhomboid family SSU16085_RS09910 PF01812 5-formyltetrahydrofolate cyclo-ligase family SSU16085_RS09915 PF01546 Peptidase family M20/M25/M40 SSU16085_RS09915 PF07687 Peptidase dimerisation domain SSU16085_RS09920 PF14602 Hexapeptide repeat of succinyl-transferase SSU16085_RS09920 PF00132 Bacterial transferase hexapeptide (six repeats) SSU16085_RS09920 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SSU16085_RS09925 PF00149 Calcineurin-like phosphoesterase SSU16085_RS09930 PF01610 Transposase SSU16085_RS09930 PF13683 Integrase core domain SSU16085_RS09935 PF00342 Phosphoglucose isomerase SSU16085_RS09950 PF14437 MafB19-like deaminase SSU16085_RS09955 PF02779 Transketolase, pyrimidine binding domain SSU16085_RS09955 PF02780 Transketolase, C-terminal domain SSU16085_RS09955 PF00456 Transketolase, thiamine diphosphate binding domain SSU16085_RS09975 PF00596 Class II Aldolase and Adducin N-terminal domain SSU16085_RS09980 PF01261 Xylose isomerase-like TIM barrel SSU16085_RS09985 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSU16085_RS09990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU16085_RS09995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU16085_RS10000 PF03611 PTS system sugar-specific permease component SSU16085_RS10005 PF17999 Pullulanase N1-terminal domain SSU16085_RS10005 PF00128 Alpha amylase, catalytic domain SSU16085_RS10005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSU16085_RS10010 PF00356 Bacterial regulatory proteins, lacI family SSU16085_RS10015 PF00005 ABC transporter SSU16085_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS10025 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS10035 PF02378 Phosphotransferase system, EIIC SSU16085_RS10045 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSU16085_RS10050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU16085_RS10055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU16085_RS10055 PF08279 HTH domain SSU16085_RS10055 PF00874 PRD domain SSU16085_RS10055 PF05043 Mga helix-turn-helix domain SSU16085_RS10065 PF00232 Glycosyl hydrolase family 1 SSU16085_RS10070 PF11975 Family 4 glycosyl hydrolase C-terminal domain SSU16085_RS10070 PF02056 Family 4 glycosyl hydrolase SSU16085_RS10075 PF00133 tRNA synthetases class I (I, L, M and V) SSU16085_RS10075 PF13603 Leucyl-tRNA synthetase, Domain 2 SSU16085_RS10075 PF09334 tRNA synthetases class I (M) SSU16085_RS10075 PF08264 Anticodon-binding domain of tRNA SSU16085_RS10080 PF01431 Peptidase family M13 SSU16085_RS10080 PF05649 Peptidase family M13 SSU16085_RS10085 PF00950 ABC 3 transport family SSU16085_RS10090 PF00950 ABC 3 transport family SSU16085_RS10095 PF00005 ABC transporter SSU16085_RS10100 PF01297 Zinc-uptake complex component A periplasmic SSU16085_RS10115 PF02580 D-Tyr-tRNA(Tyr) deacylase SSU16085_RS10120 PF02824 TGS domain SSU16085_RS10120 PF13291 ACT domain SSU16085_RS10120 PF04607 Region found in RelA / SpoT proteins SSU16085_RS10125 PF02872 5'-nucleotidase, C-terminal domain SSU16085_RS10125 PF00149 Calcineurin-like phosphoesterase SSU16085_RS10145 PF04452 RNA methyltransferase SSU16085_RS10165 PF05496 Holliday junction DNA helicase RuvB P-loop domain SSU16085_RS10165 PF12002 MgsA AAA+ ATPase C terminal SSU16085_RS10165 PF16193 AAA C-terminal domain SSU16085_RS10180 PF01610 Transposase SSU16085_RS10180 PF13683 Integrase core domain SSU16085_RS10195 PF02872 5'-nucleotidase, C-terminal domain SSU16085_RS10195 PF00149 Calcineurin-like phosphoesterase SSU16085_RS10200 PF03477 ATP cone domain SSU16085_RS10200 PF13597 Anaerobic ribonucleoside-triphosphate reductase SSU16085_RS10205 PF00005 ABC transporter SSU16085_RS10210 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS10215 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU16085_RS10220 PF07722 Peptidase C26 SSU16085_RS10230 PF05190 MutS family domain IV SSU16085_RS10230 PF05192 MutS domain III SSU16085_RS10230 PF05188 MutS domain II SSU16085_RS10230 PF01624 MutS domain I SSU16085_RS10230 PF00488 MutS domain V SSU16085_RS10235 PF02863 Arginine repressor, C-terminal domain SSU16085_RS10235 PF01316 Arginine repressor, DNA binding domain SSU16085_RS10240 PF05746 DALR anticodon binding domain SSU16085_RS10240 PF00750 tRNA synthetases class I (R) SSU16085_RS10240 PF03485 Arginyl tRNA synthetase N terminal domain SSU16085_RS10260 PF02446 4-alpha-glucanotransferase SSU16085_RS10265 PF13416 Bacterial extracellular solute-binding protein SSU16085_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component SSU16085_RS10285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SSU16085_RS10285 PF00356 Bacterial regulatory proteins, lacI family SSU16085_RS10290 PF17999 Pullulanase N1-terminal domain SSU16085_RS10290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSU16085_RS10290 PF00128 Alpha amylase, catalytic domain SSU16085_RS10295 PF07972 NrdI Flavodoxin like SSU16085_RS10300 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU16085_RS10300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSU16085_RS10305 PF01336 OB-fold nucleic acid binding domain SSU16085_RS10305 PF02938 GAD domain SSU16085_RS10305 PF00152 tRNA synthetases class II (D, K and N) SSU16085_RS10310 PF13673 Acetyltransferase (GNAT) domain SSU16085_RS10315 PF00248 Aldo/keto reductase family SSU16085_RS10320 PF00535 Glycosyl transferase family 2 SSU16085_RS10330 PF14537 Cytochrome c3 SSU16085_RS10330 PF00890 FAD binding domain SSU16085_RS10340 PF01479 S4 domain SSU16085_RS10340 PF00163 Ribosomal protein S4/S9 N-terminal domain SSU16085_RS10350 PF03796 DnaB-like helicase C terminal domain SSU16085_RS10350 PF00772 DnaB-like helicase N terminal domain SSU16085_RS10355 PF01281 Ribosomal protein L9, N-terminal domain SSU16085_RS10355 PF03948 Ribosomal protein L9, C-terminal domain SSU16085_RS10360 PF02272 DHHA1 domain SSU16085_RS10360 PF01368 DHH family SSU16085_RS10365 PF13932 GidA associated domain SSU16085_RS10365 PF01134 Glucose inhibited division protein A SSU16085_RS10375 PF01638 HxlR-like helix-turn-helix SSU16085_RS10390 PF01842 ACT domain SSU16085_RS10390 PF03315 Serine dehydratase beta chain SSU16085_RS10395 PF03313 Serine dehydratase alpha chain SSU16085_RS10405 PF02361 Cobalt transport protein SSU16085_RS10410 PF00005 ABC transporter SSU16085_RS10415 PF00005 ABC transporter SSU16085_RS10420 PF01066 CDP-alcohol phosphatidyltransferase SSU16085_RS10425 PF13464 Domain of unknown function (DUF4115) SSU16085_RS10430 PF05193 Peptidase M16 inactive domain SSU16085_RS10430 PF00675 Insulinase (Peptidase family M16) SSU16085_RS10435 PF05193 Peptidase M16 inactive domain SSU16085_RS10445 PF02463 RecF/RecN/SMC N terminal domain SSU16085_RS10450 PF00571 CBS domain SSU16085_RS10450 PF00478 IMP dehydrogenase / GMP reductase domain SSU16085_RS10455 PF00579 tRNA synthetases class I (W and Y) SSU16085_RS10460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU16085_RS10460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSU16085_RS10465 PF00005 ABC transporter SSU16085_RS10465 PF12848 ABC transporter SSU16085_RS10495 PF02590 Predicted SPOUT methyltransferase SSU16085_RS10500 PF13180 PDZ domain SSU16085_RS10505 PF02195 ParB-like nuclease domain SSU16085_RS10505 PF17762 HTH domain found in ParB protein